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Sample records for active region core

  1. THE COLD SHOULDER: EMISSION MEASURE DISTRIBUTIONS OF ACTIVE REGION CORES

    SciTech Connect

    Schmelz, J. T.; Pathak, S.

    2012-09-10

    The coronal heating mechanism for active region core loops is difficult to determine because these loops are often not resolved and cannot be studied individually. Rather, we concentrate on the 'inter-moss' areas between loop footpoints. We use observations from the Hinode EUV Imaging Spectrometer and the X-Ray Telescope to calculate the emission measure distributions of eight inter-moss areas in five different active regions. The combined data sets provide both high- and low-temperature constraints and ensure complete coverage in the temperature range appropriate for active regions. For AR 11113, the emission can be modeled with heating events that occur on timescales less than the cooling time. The loops in the core regions appear to be close to equilibrium and are consistent with steady heating. The other regions studied, however, appear to be dominated by nanoflare heating. Our results are consistent with the idea that active region age is an important parameter in determining whether steady or nanoflare heating is primarily responsible for the core emission, that is, older regions are more likely to be dominated by steady heating, while younger regions show more evidence of nanoflares.

  2. EVIDENCE OF IMPULSIVE HEATING IN ACTIVE REGION CORE LOOPS

    SciTech Connect

    Tripathi, Durgesh; Mason, Helen E.; Klimchuk, James A.

    2010-11-01

    Using a full spectral scan of an active region from the Extreme-Ultraviolet Imaging Spectrometer (EIS) we have obtained emission measure EM(T) distributions in two different moss regions within the same active region. We have compared these with theoretical transition region EMs derived for three limiting cases, namely, static equilibrium, strong condensation, and strong evaporation from Klimchuk et al. The EM distributions in both the moss regions are strikingly similar and show a monotonically increasing trend from log T[K] = 5.15-6.3. Using photospheric abundances, we obtain a consistent EM distribution for all ions. Comparing the observed and theoretical EM distributions, we find that the observed EM distribution is best explained by the strong condensation case (EM{sub con}), suggesting that a downward enthalpy flux plays an important and possibly dominant role in powering the transition region moss emission. The downflows could be due to unresolved coronal plasma that is cooling and draining after having been impulsively heated. This supports the idea that the hot loops (with temperatures of 3-5 MK) seen in the core of active regions are heated by nanoflares.

  3. Emission Measure Distribution and Heating of Two Active Region Cores

    NASA Technical Reports Server (NTRS)

    Tripathi, Durgesh; Klimchuk, James A.; Mason, Helen E.

    2011-01-01

    Using data from the Extreme-ultraviolet Imaging Spectrometer aboard Hinode, we have studied the coronal plasma in the core of two active regions. Concentrating on the area between opposite polarity moss, we found emission measure distributions having an approximate power-law form EM/T(exp 2.4) from log T = 5.55 up to a peak at log T = 6.57. The observations are explained extremely well by a simple nanoflare model. However, in the absence of additional constraints, the observations could possibly also be explained by steady heating.

  4. Determining heating timescales in solar active region cores from AIA/SDO Fe XVIII images

    SciTech Connect

    Ugarte-Urra, Ignacio; Warren, Harry P.

    2014-03-01

    We present a study of the frequency of transient brightenings in the core of solar active regions as observed in the Fe XVIII line component of AIA/SDO 94 Å filter images. The Fe XVIII emission is isolated using an empirical correction to remove the contribution of 'warm' emission to this channel. Comparing with simultaneous observations from EIS/Hinode, we find that the variability observed in Fe XVIII is strongly correlated with the emission from lines formed at similar temperatures. We examine the evolution of loops in the cores of active regions at various stages of evolution. Using a newly developed event detection algorithm, we characterize the distribution of event frequency, duration, and magnitude in these active regions. These distributions are similar for regions of similar age and show a consistent pattern as the regions age. This suggests that these characteristics are important constraints for models of solar active regions. We find that the typical frequency of the intensity fluctuations is about 1400 s for any given line of sight, i.e., about two to three events per hour. Using the EBTEL 0D hydrodynamic model, however, we show that this only sets a lower limit on the heating frequency along that line of sight.

  5. Hot Plasma from Solar Active Region Cores: a Test of AC and DC Coronal Heating Models?

    NASA Astrophysics Data System (ADS)

    Schmelz, J. T.; Asgari-Targhi, M.; Christian, G. M.; Dhaliwal, R. S.; Pathak, S.

    2015-06-01

    Direct current (DC) models of solar coronal heating invoke magnetic reconnection to convert magnetic free energy into heat, whereas alternating current (AC) models invoke wave dissipation. In both cases the energy is supplied by photospheric footpoint motions. For a given footpoint velocity amplitude, DC models predict lower average heating rates but greater temperature variability when compared to AC models. Therefore, evidence of hot plasma (T > 5 MK) in the cores of active regions could be one of the ways for current observations to distinguish between AC and DC models. We have analyzed data from the X-Ray Telescope (XRT) and the Atmospheric Imaging Assembly for 12 quiescent active region cores, all of which were observed in the XRT Be_thick channel. We did Differential Emission Measure (DEM) analysis and achieved good fits for each data set. We then artificially truncated the hot plasma of the DEM model at 5 MK and examined the resulting fits to the data. For some regions in our sample, the XRT intensities continued to be well-matched by the DEM predictions, even without the hot plasma. This truncation, however, resulted in unacceptable fits for the other regions. This result indicates that the hot plasma is present in these regions, even if the precise DEM distribution cannot be determined with the data available. We conclude that reconnection may be heating the hot plasma component of these active regions.

  6. HOT PLASMA FROM SOLAR ACTIVE REGION CORES: A TEST OF AC AND DC CORONAL HEATING MODELS?

    SciTech Connect

    Schmelz, J. T.; Christian, G. M.; Dhaliwal, R. S.; Pathak, S.; Asgari-Targhi, M.

    2015-06-20

    Direct current (DC) models of solar coronal heating invoke magnetic reconnection to convert magnetic free energy into heat, whereas alternating current (AC) models invoke wave dissipation. In both cases the energy is supplied by photospheric footpoint motions. For a given footpoint velocity amplitude, DC models predict lower average heating rates but greater temperature variability when compared to AC models. Therefore, evidence of hot plasma (T > 5 MK) in the cores of active regions could be one of the ways for current observations to distinguish between AC and DC models. We have analyzed data from the X-Ray Telescope (XRT) and the Atmospheric Imaging Assembly for 12 quiescent active region cores, all of which were observed in the XRT Be-thick channel. We did Differential Emission Measure (DEM) analysis and achieved good fits for each data set. We then artificially truncated the hot plasma of the DEM model at 5 MK and examined the resulting fits to the data. For some regions in our sample, the XRT intensities continued to be well-matched by the DEM predictions, even without the hot plasma. This truncation, however, resulted in unacceptable fits for the other regions. This result indicates that the hot plasma is present in these regions, even if the precise DEM distribution cannot be determined with the data available. We conclude that reconnection may be heating the hot plasma component of these active regions.

  7. Dynamic connectivity modulates local activity in the core regions of the default-mode network.

    PubMed

    Tang, Wei; Liu, Hesheng; Douw, Linda; Kramer, Mark A; Eden, Uri T; Hämäläinen, Matti S; Stufflebeam, Steven M

    2017-09-05

    Segregation and integration are distinctive features of large-scale brain activity. Although neuroimaging studies have been unraveling their neural correlates, how integration takes place over segregated modules remains elusive. Central to this problem is the mechanism by which a brain region adjusts its activity according to the influence it receives from other regions. In this study, we explore how dynamic connectivity between two regions affects the neural activity within a participating region. Combining functional magnetic resonance imaging (fMRI) and magnetoencephalography (MEG) in the same group of subjects, we analyzed resting-state data from the core of the default-mode network. We observed directed influence from the posterior cingulate cortex (PCC) to the anterior cingulate cortex (ACC) in the 10-Hz range. This time-varying influence was associated with the power alteration in the ACC: strong influence corresponded with a decrease of power around 13-16 Hz and an increase of power in the lower (1-7 Hz) and higher (30-55 Hz) ends of the spectrum. We also found that the amplitude of the 30- to 55-Hz activity was coupled to the phase of the 3- to 4-Hz activity in the ACC. These results characterized the local spectral changes associated with network interactions. The specific spectral information both highlights the functional roles of PCC-ACC connectivity in the resting state and provides insights into the dynamic relationship between local activity and coupling dynamics of a network.

  8. EVIDENCE FOR STEADY HEATING: OBSERVATIONS OF AN ACTIVE REGION CORE WITH HINODE AND TRACE

    SciTech Connect

    Warren, Harry P.; Brooks, David H.; Winebarger, Amy R.

    2010-03-01

    The timescale for energy release is an important parameter for constraining the coronal heating mechanism. Observations of 'warm' coronal loops ({approx}1 MK) have indicated that the heating is impulsive and that coronal plasma is far from equilibrium. In contrast, observations at higher temperatures ({approx}3 MK) have generally been consistent with steady heating models. Previous observations, however, have not been able to exclude the possibility that the high temperature loops are actually composed of many small-scale threads that are in various stages of heating and cooling and only appear to be in equilibrium. With new observations from the EUV Imaging Spectrometer and X-ray Telescope (XRT) on Hinode we have the ability to investigate the properties of high temperature coronal plasma in extraordinary detail. We examine the emission in the core of an active region and find three independent lines of evidence for steady heating. We find that the emission observed in XRT is generally steady for hours, with a fluctuation level of approximately 15% in an individual pixel. Short-lived impulsive heating events are observed, but they appear to be unrelated to the steady emission that dominates the active region. Furthermore, we find no evidence for warm emission that is spatially correlated with the hot emission, as would be expected if the high temperature loops are the result of impulsive heating. Finally, we also find that intensities in the 'moss', the footpoints of high temperature loops, are consistent with steady heating models provided that we account for the local expansion of the loop from the base of the transition region to the corona. In combination, these results provide strong evidence that the heating in the core of an active region is effectively steady, that is, the time between heating events is short relative to the relevant radiative and conductive cooling times.

  9. Evidence for Steady Heating: Observations of an Active Region Core with Hinode and TRACE

    NASA Astrophysics Data System (ADS)

    Warren, Harry P.; Winebarger, Amy R.; Brooks, David H.

    2010-03-01

    The timescale for energy release is an important parameter for constraining the coronal heating mechanism. Observations of "warm" coronal loops (~1 MK) have indicated that the heating is impulsive and that coronal plasma is far from equilibrium. In contrast, observations at higher temperatures (~3 MK) have generally been consistent with steady heating models. Previous observations, however, have not been able to exclude the possibility that the high temperature loops are actually composed of many small-scale threads that are in various stages of heating and cooling and only appear to be in equilibrium. With new observations from the EUV Imaging Spectrometer and X-ray Telescope (XRT) on Hinode we have the ability to investigate the properties of high temperature coronal plasma in extraordinary detail. We examine the emission in the core of an active region and find three independent lines of evidence for steady heating. We find that the emission observed in XRT is generally steady for hours, with a fluctuation level of approximately 15% in an individual pixel. Short-lived impulsive heating events are observed, but they appear to be unrelated to the steady emission that dominates the active region. Furthermore, we find no evidence for warm emission that is spatially correlated with the hot emission, as would be expected if the high temperature loops are the result of impulsive heating. Finally, we also find that intensities in the "moss," the footpoints of high temperature loops, are consistent with steady heating models provided that we account for the local expansion of the loop from the base of the transition region to the corona. In combination, these results provide strong evidence that the heating in the core of an active region is effectively steady, that is, the time between heating events is short relative to the relevant radiative and conductive cooling times.

  10. Elemental abundances and temperatures of quiescent solar active region cores from X-ray observations

    NASA Astrophysics Data System (ADS)

    Del Zanna, G.; Mason, H. E.

    2014-05-01

    A brief review of studies of elemental abundances and emission measures in quiescent solar active region cores is presented. Hinode EUV Imaging Spectrometer (EIS) observations of strong iron spectral lines have shown sharply peaked distributions around 3 MK. EIS observations of lines emitted by a range of elements have allowed good estimates of abundances relative to iron. However, X-ray observations are required to measure the plasma emission above 3 MK and the abundances of oxygen and neon. We revisit, using up-to-date atomic data, older X-ray observations obtained by a sounding rocket and by the Solar Maximum Mission (SMM) Flat Crystal Spectrometer (FCS). We find that the Fe/O and Fe/Ne ratios are normally increased by a factor of 3.2, compared to the photospheric values. Similar results are obtained from FCS observations of six quiescent active region cores. The FCS observations also indicate that the emission measure above 3 MK has a very steep negative slope, with very little plasma observed at 5 MK or above. Appendix A is available in electronic form at http://www.aanda.org

  11. CAN A LONG NANOFLARE STORM EXPLAIN THE OBSERVED EMISSION MEASURE DISTRIBUTIONS IN ACTIVE REGION CORES?

    SciTech Connect

    Mulu-Moore, Fana M.; Winebarger, Amy R.; Warren, Harry P.

    2011-11-20

    All theories that attempt to explain the heating of the high-temperature plasma observed in the solar corona are based on short bursts of energy. The intensities and velocities measured in the cores of quiescent active regions, however, can be steady over many hours of observation. One heating scenario that has been proposed to reconcile such observations with impulsive heating models is the 'long nanoflare storm', where short-duration heating events occur infrequently on many sub-resolution strands; the emission of the strands is then averaged together to explain the observed steady structures. In this Letter, we examine the emission measure distribution predicted for such a long nanoflare storm by modeling an arcade of strands in an active region core. Comparisons of the computed emission measure distributions with recent observations indicate that the long nanoflare storm scenario implies greater than five times more 1 MK emission than is actually observed for all plausible combinations of loop lengths, heating rates, and abundances. We conjecture that if the plasma had 'super coronal' abundances, the model may be able to match the observations at low temperatures.

  12. DIAGNOSING THE TIME DEPENDENCE OF ACTIVE REGION CORE HEATING FROM THE EMISSION MEASURE. II. NANOFLARE TRAINS

    SciTech Connect

    Reep, J. W.; Bradshaw, S. J.; Klimchuk, J. A. E-mail: stephen.bradshaw@rice.edu

    2013-02-20

    The time dependence of heating in solar active regions can be studied by analyzing the slope of the emission measure distribution coolward of the peak. In a previous study we showed that low-frequency heating can account for 0% to 77% of active region core emission measures. We now turn our attention to heating by a finite succession of impulsive events for which the timescale between events on a single magnetic strand is shorter than the cooling timescale. We refer to this scenario as a 'nanoflare train' and explore a parameter space of heating and coronal loop properties with a hydrodynamic model. Our conclusions are (1) nanoflare trains are consistent with 86% to 100% of observed active region cores when uncertainties in the atomic data are properly accounted for; (2) steeper slopes are found for larger values of the ratio of the train duration {Delta} {sub H} to the post-train cooling and draining timescale {Delta} {sub C}, where {Delta} {sub H} depends on the number of heating events, the event duration and the time interval between successive events ({tau} {sub C}); (3) {tau} {sub C} may be diagnosed from the width of the hot component of the emission measure provided that the temperature bins are much smaller than 0.1 dex; (4) the slope of the emission measure alone is not sufficient to provide information about any timescale associated with heating-the length and density of the heated structure must be measured for {Delta} {sub H} to be uniquely extracted from the ratio {Delta} {sub H}/{Delta} {sub C}.

  13. Obesity and insulin resistance are associated with reduced activity in core memory regions of the brain.

    PubMed

    Cheke, Lucy G; Bonnici, Heidi M; Clayton, Nicola S; Simons, Jon S

    2017-02-01

    Increasing research in animals and humans suggests that obesity may be associated with learning and memory deficits, and in particular with reductions in episodic memory. Rodent models have implicated the hippocampus in obesity-related memory impairments, but the neural mechanisms underlying episodic memory deficits in obese humans remain undetermined. In the present study, lean and obese human participants were scanned using fMRI while completing a What-Where-When episodic memory test (the "Treasure-Hunt Task") that assessed the ability to remember integrated item, spatial, and temporal details of previously encoded complex events. In lean participants, the Treasure-Hunt task elicited significant activity in regions of the brain known to be important for recollecting episodic memories, such as the hippocampus, angular gyrus, and dorsolateral prefrontal cortex. Both obesity and insulin resistance were associated with significantly reduced functional activity throughout the core recollection network. These findings indicate that obesity is associated with reduced functional activity in core brain areas supporting episodic memory and that insulin resistance may be a key player in this association.

  14. Temperature Analysis of an Active Region Core Loop Using AIA and XRT Data

    NASA Astrophysics Data System (ADS)

    Garst, Jennifer W.; Schmelz, J.; Kimble, J.

    2012-05-01

    Data obtained on December 10, 2010 by both the Atmospheric Imaging Assembly (AIA) and the X-Ray Telescope (XRT) are co-aligned and appropriately scaled in order to do a differential emission measure analysis of the combined data. This project uses Hybrid abundances from Fludra & Schmelz and atomic data from the CHIANTI atomic physics database to analyze an active region core loop and report on the multithermal analysis of the combined data set. The loop being analyzed is visible in the 94, 131, 171, 193, 211, 335 Å passbands on AIA; and the Al-thick, Ti-poly, Al-mesh, Al-poly/Ti-poly, C-Poly/Ti-poly, C-poly, Be-thin, Be-med, Al-med, and Al-poly filters on XRT. Solar physics research at the University of Memphis is supported by NSF ATM-0402729 as well as a Hinode subcontract from NASA/SAO.

  15. Using a Differential Emission Measure and Density Measurements in an Active Region Core to Test a Steady Heating Model

    NASA Astrophysics Data System (ADS)

    Winebarger, Amy R.; Schmelz, Joan T.; Warren, Harry P.; Saar, Steve H.; Kashyap, Vinay L.

    2011-10-01

    The frequency of heating events in the corona is an important constraint on the coronal heating mechanisms. Observations indicate that the intensities and velocities measured in active region cores are effectively steady, suggesting that heating events occur rapidly enough to keep high-temperature active region loops close to equilibrium. In this paper, we couple observations of active region (AR) 10955 made with the X-Ray Telescope and the EUV Imaging Spectrometer on board Hinode to test a simple steady heating model. First we calculate the differential emission measure (DEM) of the apex region of the loops in the active region core. We find the DEM to be broad and peaked around 3 MK. We then determine the densities in the corresponding footpoint regions. Using potential field extrapolations to approximate the loop lengths and the density-sensitive line ratios to infer the magnitude of the heating, we build a steady heating model for the active region core and find that we can match the general properties of the observed DEM for the temperature range of 6.3 < log T < 6.7. This model, for the first time, accounts for the base pressure, loop length, and distribution of apex temperatures of the core loops. We find that the density-sensitive spectral line intensities and the bulk of the hot emission in the active region core are consistent with steady heating. We also find, however, that the steady heating model cannot address the emission observed at lower temperatures. This emission may be due to foreground or background structures, or may indicate that the heating in the core is more complicated. Different heating scenarios must be tested to determine if they have the same level of agreement.

  16. Heating mechanisms for intermittent loops in active region cores from AIA/SDO EUV observations

    SciTech Connect

    Cadavid, A. C.; Lawrence, J. K.; Christian, D. J.; Jess, D. B.; Nigro, G.

    2014-11-01

    We investigate intensity variations and energy deposition in five coronal loops in active region cores. These were selected for their strong variability in the AIA/SDO 94 Å intensity channel. We isolate the hot Fe XVIII and Fe XXI components of the 94 Å and 131 Å by modeling and subtracting the 'warm' contributions to the emission. HMI/SDO data allow us to focus on 'inter-moss' regions in the loops. The detailed evolution of the inter-moss intensity time series reveals loops that are impulsively heated in a mode compatible with a nanoflare storm, with a spike in the hot 131 Å signals leading and the other five EUV emission channels following in progressive cooling order. A sharp increase in electron temperature tends to follow closely after the hot 131 Å signal confirming the impulsive nature of the process. A cooler process of growing emission measure follows more slowly. The Fourier power spectra of the hot 131 Å signals, when averaged over the five loops, present three scaling regimes with break frequencies near 0.1 min{sup –1} and 0.7 min{sup –1}. The low frequency regime corresponds to 1/f noise; the intermediate indicates a persistent scaling process and the high frequencies show white noise. Very similar results are found for the energy dissipation in a 2D 'hybrid' shell model of loop magneto-turbulence, based on reduced magnetohydrodynamics, that is compatible with nanoflare statistics. We suggest that such turbulent dissipation is the energy source for our loops.

  17. FLOWS AND MOTIONS IN MOSS IN THE CORE OF A FLARING ACTIVE REGION: EVIDENCE FOR STEADY HEATING

    SciTech Connect

    Brooks, David H.; Warren, Harry P.

    2009-09-20

    We present new measurements of the time variability of intensity, Doppler, and nonthermal velocities in moss in an active region core observed by the EUV Imaging Spectrometer on Hinode in 2007 June. The measurements are derived from spectral profiles of the Fe XII 195 A line. Using the 2'' slit, we repeatedly scanned 150'' by 150'' in a few minutes. This is the first time it has been possible to make such velocity measurements in the moss, and the data presented are the highest cadence spatially resolved maps of moss Doppler and nonthermal velocities ever obtained in the corona. The observed region produced numerous C- and M-class flares with several occurring in the core close to the moss. The magnetic field was therefore clearly changing in the active region core, so we ought to be able to detect dynamic signatures in the moss if they exist. Our measurements of moss intensities agree with previous studies in that a less than 15% variability is seen over a period of 16 hr. Our new measurements of Doppler and nonthermal velocities reveal no strong flows or motions in the moss, nor any significant variability in these quantities. The results confirm that moss at the bases of high temperature coronal loops is heated quasi-steadily. They also show that quasi-steady heating can contribute significantly even in the core of a flare productive active region. Such heating may be impulsive at high frequency, but if so it does not give rise to large flows or motions.

  18. Characteristics and Evolution of the Magnetic Field and Chromospheric Emission in an Active Region Core Observed by Hinode

    DTIC Science & Technology

    2010-06-30

    ar X iv :1 00 6. 57 76 v1 [ as tr o- ph .S R ] 3 0 Ju n 20 10 CHARACTERISTICS AND EVOLUTION OF THE MAGNETIC FIELD AND CHROMOSPHERIC EMISSION IN...describe the characteristics and evolution of the magnetic field and chromospheric emission in an active region core observed by the Solar Optical Telescope...extends to significant coronal heights. The magnetic flux, field vector, and chromospheric emission in the moss also appear highly dynamic, but actually

  19. "Hot" Non-flaring Plasmas in Active Region Cores Heated by Single Nanoflares

    NASA Astrophysics Data System (ADS)

    Barnes, Will Thomas; Cargill, Peter; Bradshaw, Stephen

    2016-05-01

    We use hydrodynamic modeling tools, including a two-fluid development of the EBTEL code, to investigate the properties expected of "hot" (i.e. between 106.7 and 107.2 K) non-flaring plasmas due to nanoflare heating in active regions. Here we focus on single nanoflares and show that while simple models predict an emission measure distribution extending well above 10 MK that is consistent with cooling by thermal conduction, many other effects are likely to limit the existence and detectability of such plasmas. These include: differential heating between electrons and ions, ionization non-equilibrium and, for short nanoflares, the time taken for the coronal density to increase. The most useful temperature range to look for this plasma, often called the "smoking gun" of nanoflare heating, lies between 1 MK and 10 MK. Signatures of the actual heating may be detectable in some instances.

  20. Hot Plasma from Solar Active-Region Cores: Constraints from the Hinode X-Ray Telescope

    NASA Astrophysics Data System (ADS)

    Schmelz, J. T.; Christian, G. M.; Matheny, P. O.

    2016-12-01

    Mechanisms invoked to heat the solar corona to millions of degrees kelvin involve either magnetic waves or magnetic reconnections. Turbulence in the convection zone produces MHD waves, which travel upward and dissipate. Photospheric motions continuously build up magnetic energy, which is released through magnetic reconnection. In this paper, we concentrate on hot non-flaring plasma with temperatures of 5 MK < T < 10 MK because it is one of the few observables for which wave and reconnection models make different predictions. Wave models predict no (or little) hot plasma, whereas reconnection models predict it, although in amounts that are challenging to detect with current instrumentation. We used data from the X-ray Telescope (XRT) and the Atmospheric Imaging Assembly (AIA). We requested a special XRT observing sequence, which cycled through the thickest XRT filter several times per hour so we could average these images and improve the signal-to-noise. We did differential emission measure (DEM) analysis using the time-averaged thick-filter data as well as all available channels from both the XRT and AIA for regions observed on 2014 December 11. Whereas our earlier work was only able to determine that plasma with a temperature greater than 5 MK was present, we are now able to find a well-constrained DEM distribution. We have therefore added a strong observational constraint that must be explained by any viable coronal heating model. Comparing state-of-the-art wave and reconnection model predictions, we can conclude that reconnection is heating the hot plasma in these active regions.

  1. Characterization of a core region in the A2UCOE that confers effective anti-silencing activity.

    PubMed

    Zhang, Fang; Santilli, Giorgia; Thrasher, Adrian J

    2017-08-31

    We have previously shown that reliability of the A2UCOE in driving transgene expression can be attributed to its resistance to DNA methylation, and its ability to confer this property to linked regulatory sequences. In order to gain a better understanding of how resistance to DNA methylation from the A2UCOE is conferred, and whether the anti-silencing effect from the A2UCOE is confined within a core region, we evaluated the anti-silencing effect of different sub-domains. We found that maximal epigenetic regulatory activity was contained within a 455 bp element derived from the CBX3 region when tested in the context of a lentiviral vector in murine embryonic stem (ES) cells and human inducible pluripotent stem (iPS) cells. This region possessed an active chromatin signature, and operated effectively in cis to protect linked heterologous regulatory elements from methylation, thereby conferring stable transgene expression. Defined UCOE elements may be particularly useful for use in vectors where gene expression is desired in methylation-prone chromatin environments such as those encountered in pluripotent stem cells.

  2. CHARACTERISTICS AND EVOLUTION OF THE MAGNETIC FIELD AND CHROMOSPHERIC EMISSION IN AN ACTIVE REGION CORE OBSERVED BY HINODE

    SciTech Connect

    Brooks, David H.; Warren, Harry P.; Winebarger, Amy R.

    2010-09-10

    We describe the characteristics and evolution of the magnetic field and chromospheric emission in an active region core observed by the Solar Optical Telescope (SOT) on Hinode. Consistent with previous studies, we find that the moss is unipolar, the spatial distribution of magnetic flux evolves slowly, and that the magnetic field is only moderately inclined. We also show that the field-line inclination and horizontal component are coherent, and that the magnetic field is mostly sheared in the inter-moss regions where the highest magnetic flux variability is seen. Using extrapolations from spectropolarimeter magnetograms, we show that the magnetic connectivity in the moss is different from that in the quiet Sun because most of the magnetic field extends to significant coronal heights. The magnetic flux, field vector, and chromospheric emission in the moss also appear highly dynamic but actually show only small-scale variations in magnitude on timescales longer than the cooling times for hydrodynamic loops computed from our extrapolations, suggesting high-frequency (continuous) heating events. Some evidence is found for flux (Ca II intensity) changes on the order of 100-200 G (DN) on timescales of 20-30 minutes that could be taken as indicative of low-frequency heating. We find, however, that only a small fraction (10%) of our simulated loops would be expected to cool on these timescales, and we do not find clear evidence that the flux changes consistently produce intensity changes in the chromosphere. Using observations from the EUV Imaging Spectrometer (EIS), we also determine that the filling factor in the moss is {approx}16%, consistent with previous studies and larger than the size of an SOT pixel. The magnetic flux and chromospheric intensity in most individual SOT pixels in the moss vary by less than {approx}20% and {approx}10%, respectively, on loop cooling timescales. In view of the high energy requirements of the chromosphere, we suggest that these

  3. Investigating the potential of conserved inner core oligosaccharide regions of Moraxella catarrhalis lipopolysaccharide as vaccine antigens: accessibility and functional activity of monoclonal antibodies and glycoconjugate derived sera.

    PubMed

    Cox, Andrew D; St Michael, Frank; Cairns, Chantelle M; Lacelle, Suzanne; Filion, Amy Lea; Neelamegan, Dhamodharan; Wenzel, Cory Q; Horan, Heather; Richards, James C

    2011-05-01

    We investigated the conservation and antibody accessibility of inner core epitopes of Moraxella catarrhalis lipopolysaccharide (LPS) in order to assess their potential as vaccine candidates. Two LPS mutants, a single mutant designated lgt2 and a double mutant termed lgt2/lgt4, elaborating truncated inner core structures were generated in order to preclude expression of host-like outer core structures and to create an inner core structure that was shared by all three serotypes A, B and C of M. catarrhalis. Murine monoclonal antibodies (mAbs), designated MC2-1 and MC2-10 were obtained by immunising mice with the lgt2 mutant of M. catarrhalis serotype A strain. We showed that mAb MC2-1 can bind to the core LPS of wild-type (wt) serotype A, B and C organisms and concluded that mAb MC2-1 defines an immunogenic inner core epitope of M. catarrhalis LPS. We were unsuccessful in obtaining mAbs to the lgt2/lgt4 mutant. MAb MC2-10 only recognised the lgt2 mutant and the wt serotype A strain, and exhibited a strong requirement for the terminal N-acetyl-glucosamine residue of the lgt2 mutant core oligosaccharide, suggesting that this residue was immunodominant. Subsequently, we showed that both mAbs MC2-1 and MC2-10 could facilitate bactericidal killing of the lgt2 mutant, however neither mAb could facilitate bactericidal killing of the wt serotype A strain. We then confirmed and extended the candidacy of the inner core LPS by demonstrating that it is possible to elicit functional antibodies against M. catarrhalis wt strains following immunisation of rabbits with glycoconjugates elaborating the conserved inner core LPS antigen. The present study describes three conjugation strategies that either uses amidases produced by Dictyostelium discoideum, targeting the amino functionality created by the amidase activity as the attachment point on the LPS molecule, or a strong base treatment to remove all fatty acids from the LPS, thus creating amino functionalities in the lipid A region

  4. Inference of Heating Properties from "Hot" Non-flaring Plasmas in Active Region Cores. I. Single Nanoflares

    NASA Astrophysics Data System (ADS)

    Barnes, W. T.; Cargill, P. J.; Bradshaw, S. J.

    2016-09-01

    The properties that are expected of “hot” non-flaring plasmas due to nanoflare heating in active regions are investigated using hydrodynamic modeling tools, including a two-fluid development of the Enthalpy Based Thermal Evolution of Loops code. Here we study a single nanoflare and show that while simple models predict an emission measure distribution extending well above 10 MK, which is consistent with cooling by thermal conduction, many other effects are likely to limit the existence and detectability of such plasmas. These include: differential heating between electrons and ions, ionization non-equilibrium, and for short nanoflares, the time taken for the coronal density to increase. The most useful temperature range to look for this plasma, often called the “smoking gun” of nanoflare heating, lies between 106.6 and 107 K. Signatures of the actual heating may be detectable in some instances.

  5. ADS-J1 inhibits human immunodeficiency virus type 1 entry by interacting with the gp41 pocket region and blocking fusion-active gp41 core formation.

    PubMed

    Wang, Hongtao; Qi, Zhi; Guo, Angi; Mao, Qinchao; Lu, Hong; An, Xiuli; Xia, Chenglai; Li, Xiaojuan; Debnath, Asim K; Wu, Shuguang; Liu, Shuwen; Jiang, Shibo

    2009-12-01

    We previously identified a small-molecule anti-human immunodeficiency virus type 1 (anti-HIV-1) compound, ADS-J1, using a computer-aided molecular docking technique for primary screening and a sandwich enzyme-linked immunosorbent assay (ELISA) as a secondary screening method. In the present study, we demonstrated that ADS-J1 is an HIV-1 entry inhibitor, as determined by a time-of-addition assay and an HIV-1-mediated cell fusion assay. Further mechanism studies confirmed that ADS-J1 does not block gp120-CD4 binding and exhibits a marginal interaction with the HIV-1 coreceptor CXCR4. However, ADS-J1 inhibited the fusion-active gp41 core formation mimicked by peptides derived from the viral gp41 N-terminal heptad repeat (NHR) and C-terminal heptad repeat (CHR), as determined by ELISA, native polyacrylamide gel electrophoresis, and circular dichroism analysis. Moreover, using a surface plasmon resonance assay, we found that ADS-J1 could bind directly to IQN17, a trimeric peptide containing the gp41 pocket region, resulting in the conformational change of IQN17 and the blockage of its interaction with a short D peptide, PIE7. The positively charged residue (K574) located in the gp41 pocket region is critical for the binding of ADS-J1 to NHR. These results suggest that ADS-J1 may bind to the viral gp41 NHR region through its hydrophobic and ionic interactions with the hydrophobic and positively charged resides located in the pocket region, subsequently blocking the association between the gp41 NHR and CHR regions to form the fusion-active gp41 core, thereby inhibiting HIV-1-mediated membrane fusion and virus entry.

  6. Interaction of the Transcription Start Site Core Region and Transcription Factor YY1 Determine Ascorbate Transporter SVCT2 Exon 1a Promoter Activity

    PubMed Central

    Qiao, Huan; May, James M.

    2012-01-01

    Transcription of the ascorbate transporter, SVCT2, is driven by two distinct promoters in exon 1 of the transporter sequence. The exon 1a promoter lacks a classical transcription start site and little is known about regulation of promoter activity in the transcription start site core (TSSC) region. Here we present evidence that the TSSC binds the multifunctional initiator-binding protein YY1. Electrophoresis shift assays using YY1 antibody showed that YY1 is present as one of two major complexes that specifically bind to the TSSC. The other complex contains the transcription factor NF-Y. Mutations in the TSSC that decreased YY1 binding also impaired the exon 1a promoter activity despite the presence of an upstream activating NF-Y/USF complex, suggesting that YY1 is involved in the regulation of the exon 1a transcription. Furthermore, YY1 interaction with NF-Y and/or USF synergistically enhanced the exon 1a promoter activity in transient transfections and co-activator p300 enhanced their synergistic activation. We propose that the TSSC plays a vital role in the exon 1a transcription and that this function is partially carried out by the transcription factor YY1. Moreover, co-activator p300 might be able to synergistically enhance the TSSC function via a “bridge” mechanism with upstream sequences. PMID:22532872

  7. Parasiticidal activity of a novel synthetic peptide from the core α-helical region of NK-lysin.

    PubMed

    Lee, Sung Hyen; Lillehoj, Hyun S; Tuo, Wenbin; Murphy, Charles A; Hong, Yeong H; Lillehoj, Erik P

    2013-10-18

    NK-lysin is an anti-microbial peptide that plays a critical role in innate immunity against infectious pathogens through its selective membrane disruptive property. We previously expressed and purified a full-length chicken NK-lysin (cNKL) recombinant protein, and demonstrated its in vitro anti-parasitic activity against the apicomplexan protozoan, Eimeria, the etiologic agent of avian coccidiosis. This study evaluated the in vitro and in vivo anti-parasitic properties of a synthetic peptide (cNK-2) incorporating a predicted membrane-permeating, amphipathic α-helix of the full-length cNKL protein. The cNK-2 peptide exhibited dose- and time-dependent in vitro cytotoxic activity against E. acervulina and E. tenella sporozoites. The cytotoxic activity of 1.5 μM of cNK-2 peptide against E. acervulina following 6h incubation was equal to that of 2.5 μM of melittin, the principal active component of apitoxin (bee venom) that also exhibits anti-microbial activity. Even greater activity was detected against E. tenella, where 0.3 μM of cNK-2 peptide was equivalent to 2.5 μM of melittin. Against Neospora caninum tacyzoites, however, the cytotoxic activity of cNK-2 peptide was inferior to that of melittin. Transmission electron microscopy of peptide-treated E. tenella sporozoites revealed disruption of the outer plasma membrane and loss of intracellular contents. In vivo administration of 1.5 μM of cNK-2 peptide increased protection against experimental E. acervulina infection, as measured by greater body weight gain and reduced fecal oocyst shedding, compared with saline controls. These results suggest that the cNK-2 synthetic peptide is a novel anti-infective peptide that can be used for protection against avian coccidiosis during commercial poultry production.

  8. The structures of core regions from enterobacterial lipopolysaccharides - an update.

    PubMed

    Holst, Otto

    2007-06-01

    To the major virulence factors of Gram-negative bacteria belong the lipopolysaccharides (endotoxins), which are very well characterized for their immunological, pharmacological and pathophysiological effects displayed in eucaryotic cells and organisms. In general, these amphiphilic lipopolysaccharides comprise three regions, which can be differentiated by their structures, function, genetics and biosynthesis: lipid A, the core region and a polysaccharide portion, which may be the O-specific polysaccharide, Enterobacterial Common Antigen (ECA) or a capsular polysaccharide. In the past, much emphasis has been laid on the elucidation of the structure-function relation. The lipid A was proven to represent the toxic principle of endotoxic active lipopolysaccharides, however, its toxicity depends not only on its structure but also on that of the core region, which is covalently linked to lipid A. Thus, and since the core region possesses immunogenic properties, complete structural analyses of lipopolysaccharides core regions and of structure-function relation are highly important for a better understanding of lipopolysaccharides action. To date, quite a number of core structures from lipopolysaccharides of various Gram-negative bacteria have been published and summarized in several overviews. This short review adds to this knowledge those structures of enterobacterial lipopolysaccharides that were published between January 2002 and October 2006.

  9. Divergent Activity Profiles of Type 1 Ryanodine Receptor Channels Carrying Malignant Hyperthermia and Central Core Disease Mutations in the Amino-Terminal Region.

    PubMed

    Murayama, Takashi; Kurebayashi, Nagomi; Yamazawa, Toshiko; Oyamada, Hideto; Suzuki, Junji; Kanemaru, Kazunori; Oguchi, Katsuji; Iino, Masamitsu; Sakurai, Takashi

    2015-01-01

    The type 1 ryanodine receptor (RyR1) is a Ca2+ release channel in the sarcoplasmic reticulum of skeletal muscle and is mutated in several diseases, including malignant hyperthermia (MH) and central core disease (CCD). Most MH and CCD mutations cause accelerated Ca2+ release, resulting in abnormal Ca2+ homeostasis in skeletal muscle. However, how specific mutations affect the channel to produce different phenotypes is not well understood. In this study, we have investigated 11 mutations at 7 different positions in the amino (N)-terminal region of RyR1 (9 MH and 2 MH/CCD mutations) using a heterologous expression system in HEK293 cells. In live-cell Ca2+ imaging at room temperature (~25 °C), cells expressing mutant channels exhibited alterations in Ca2+ homeostasis, i.e., an enhanced sensitivity to caffeine, a depletion of Ca2+ in the ER and an increase in resting cytoplasmic Ca2+. RyR1 channel activity was quantitatively evaluated by [3H]ryanodine binding and three parameters (sensitivity to activating Ca2+, sensitivity to inactivating Ca2+ and attainable maximum activity, i.e., gain) were obtained by fitting analysis. The mutations increased the gain and the sensitivity to activating Ca2+ in a site-specific manner. The gain was consistently higher in both MH and MH/CCD mutations. Sensitivity to activating Ca2+ was markedly enhanced in MH/CCD mutations. The channel activity estimated from the three parameters provides a reasonable explanation to the pathological phenotype assessed by Ca2+ homeostasis. These properties were also observed at higher temperatures (~37 °C). Our data suggest that divergent activity profiles may cause varied disease phenotypes by specific mutations. This approach should be useful for diagnosis and treatment of diseases with mutations in RyR1.

  10. Optical fiber sensor having an active core

    NASA Technical Reports Server (NTRS)

    Egalon, Claudio Oliveira (Inventor); Rogowski, Robert S. (Inventor)

    1993-01-01

    An optical fiber is provided. The fiber is comprised of an active fiber core which produces waves of light upon excitation. A factor ka is identified and increased until a desired improvement in power efficiency is obtained. The variable a is the radius of the active fiber core and k is defined as 2 pi/lambda wherein lambda is the wavelength of the light produced by the active fiber core. In one embodiment, the factor ka is increased until the power efficiency stabilizes. In addition to a bare fiber core embodiment, a two-stage fluorescent fiber is provided wherein an active cladding surrounds a portion of the active fiber core having an improved ka factor. The power efficiency of the embodiment is further improved by increasing a difference between the respective indices of refraction of the active cladding and the active fiber core.

  11. Functional Screening of Core Promoter Activity.

    PubMed

    Even, Dan Y; Kedmi, Adi; Ideses, Diana; Juven-Gershon, Tamar

    2017-01-01

    The core promoter is the DNA sequence that recruits the basal transcription machinery and directs accurate initiation of transcription. It is an active contributor to gene expression that can be rationally designed to manipulate the levels of expression. Core promoter function can be analyzed using different experimental approaches. Here, we describe the qualitative and quantitative analysis of engineered core promoter functions using the EGFP reporter gene that is driven by distinct core promoters. Expression plasmids are transfected into different mammalian cell lines, and the resulting fluorescence is monitored by live cell imaging , as well as by flow cytometry. In order to verify that the transcriptional activity of the examined core promoters is indeed a function of their activity, as opposed to differences in DNA uptake, real-time quantitative PCR analysis is performed. Importantly, the described methodology for functional screening of core promoter activity has enabled the analysis of engineered potent core promoters for extended time periods.

  12. Active Regions Blossoming

    NASA Image and Video Library

    2015-10-28

    As a pair of active regions began to rotate into view, their towering magnetic field lines above them bloomed into a dazzling display of twisting arches (Oct. 27-28, 2015). Some of the lines reached over and connected with the neighboring active region. Active regions are usually the source of solar storms. The images were taken in a wavelength of extreme ultraviolet light. http://photojournal.jpl.nasa.gov/catalog/PIA20048

  13. Turbine component casting core with high resolution region

    DOEpatents

    Kamel, Ahmed; Merrill, Gary B.

    2014-08-26

    A hollow turbine engine component with complex internal features can include a first region and a second, high resolution region. The first region can be defined by a first ceramic core piece formed by any conventional process, such as by injection molding or transfer molding. The second region can be defined by a second ceramic core piece formed separately by a method effective to produce high resolution features, such as tomo lithographic molding. The first core piece and the second core piece can be joined by interlocking engagement that once subjected to an intermediate thermal heat treatment process thermally deform to form a three dimensional interlocking joint between the first and second core pieces by allowing thermal creep to irreversibly interlock the first and second core pieces together such that the joint becomes physically locked together providing joint stability through thermal processing.

  14. Comparative Genomics of the Aeromonadaceae Core Oligosaccharide Biosynthetic Regions.

    PubMed

    Forn-Cuní, Gabriel; Merino, Susana; Tomás, Juan M

    2017-02-28

    Lipopolysaccharides (LPSs) are an integral part of the Gram-negative outer membrane, playing important organizational and structural roles and taking part in the bacterial infection process. In Aeromonas hydrophila, piscicola, and salmonicida, three different genomic regions taking part in the LPS core oligosaccharide (Core-OS) assembly have been identified, although the characterization of these clusters in most aeromonad species is still lacking. Here, we analyse the conservation of these LPS biosynthesis gene clusters in the all the 170 currently public Aeromonas genomes, including 30 different species, and characterise the structure of a putative common inner Core-OS in the Aeromonadaceae family. We describe three new genomic organizations for the inner Core-OS genomic regions, which were more evolutionary conserved than the outer Core-OS regions, which presented remarkable variability. We report how the degree of conservation of the genes from the inner and outer Core-OS may be indicative of the taxonomic relationship between Aeromonas species.

  15. Gyrating Active Region

    NASA Image and Video Library

    2017-01-26

    On Jan. 20, 2017, NASA Solar Dynamics Observatory captured a small area of the sun highlighted three active region. Over half a day this active region sent dark swirls of plasma and bright magnetic arches twisting and turning above it. All the activity in the three areas was driven by competing magnetic forces. The dynamic action was observed in a wavelength of extreme ultraviolet light. Movies are available at http://photojournal.jpl.nasa.gov/catalog/PIA11703

  16. A Second Outer-Core Region in Klebsiella pneumoniae Lipopolysaccharide†

    PubMed Central

    Regué, Miguel; Izquierdo, Luis; Fresno, Sandra; Piqué, Núria; Corsaro, Maria Michela; Naldi, Teresa; De Castro, Cristina; Waidelich, Dietmar; Merino, Susana; Tomás, Juan M.

    2005-01-01

    Up to now only one major type of core oligosaccharide has been found in the lipopolysaccharide of all Klebsiella pneumoniae strains analyzed. Applying a different screening approach, we identified a novel Klebsiella pneumoniae core (type 2). Both Klebsiella core types share the same inner core and the outer-core-proximal disaccharide, GlcN-(1,4)-GalA, but they differ in the GlcN substituents. In core type 2, the GlcpN residue is substituted at the O-4 position by the disaccharide β-Glcp(1-6)-α-Glcp(1, while in core type 1 the GlcpN residue is substituted at the O-6 position by either the disaccharide α-Hep(1-4)-α-Kdo(2 or a Kdo residue (Kdo is 3-deoxy-d-manno-octulosonic acid). This difference correlates with the presence of a three-gene region in the corresponding core biosynthetic clusters. Engineering of both core types by interchanging this specific region allowed studying the effect on virulence. The replacement of Klebsiella core type 1 in a highly type 2 virulent strain (52145) induces lower virulence than core type 2 in a murine infection model. PMID:15937181

  17. Active Regions' Magnetic Connection

    NASA Image and Video Library

    2017-05-22

    Several bright bands of plasma connect from one active region to another, even though they are tens of thousands of miles away from each other (May 17-18, 2017). Active regions are, by their nature, strong magnetic areas with north and south poles. The plasma consists of charged particles that stream along the magnetic field lines between these two regions. These connecting lines are clearly visible in this wavelength of extreme ultraviolet light. Other loops and strands of bright plasma can be seen rising up and out of smaller active regions as well. The video covers about one day's worth of activity. Movies are available at https://photojournal.jpl.nasa.gov/catalog/PIA21638

  18. Hinode/EIS Spectroscopic Validation of Very Hot Plasma Imaged with the Solar Dynamics Observatory in Non-flaring Active Region Cores

    NASA Astrophysics Data System (ADS)

    Testa, Paola; Reale, Fabio

    2012-05-01

    We use coronal imaging observations with the Solar Dynamics Observatory/Atmospheric Imaging Assembly (AIA), and Hinode/Extreme-ultraviolet Imaging Spectrometer (EIS) spectral data to explore the potential of narrowband EUV imaging data for diagnosing the presence of hot (T >~ 5 MK) coronal plasma in active regions. We analyze observations of two active regions (AR 11281, AR 11289) with simultaneous AIA imaging and EIS spectral data, including the Ca XVII line (at 192.8 Å), which is one of the few lines in the EIS spectral bands sensitive to hot coronal plasma even outside flares. After careful co-alignment of the imaging and spectral data, we compare the morphology in a three-color image combining the 171, 335, and 94 Å AIA spectral bands, with the image obtained for Ca XVII emission from the analysis of EIS spectra. We find that in the selected active regions the Ca XVII emission is strong only in very limited areas, showing striking similarities with the features bright in the 94 Å (and 335 Å) AIA channels and weak in the 171 Å band. We conclude that AIA imaging observations of the solar corona can be used to track hot plasma (6-8 MK), and so to study its spatial variability and temporal evolution at high spatial and temporal resolution.

  19. Energized Active Regions

    NASA Image and Video Library

    2017-06-02

    A pair of relatively small (but frenetic) active regions rotated into view, spouting off numerous small flares and sweeping loops of plasma (May 31-June 2, 2017). At first, only the one active region was observed, but mid-way though the video clip a second one behind the first can be picked out. The dynamic regions were easily the most remarkable areas on the sun during this 42-hour period. The images were taken in a wavelength of extreme ultraviolet light. Movies are available at https://photojournal.jpl.nasa.gov/catalog/PIA21756

  20. Agitated Active Region

    NASA Image and Video Library

    2016-10-11

    An active region just rotating into view gave us a perfect view of the tussle of magnetic field lines above it (Oct. 10-11, 2016). The particles spiraling along the magnetic field lines become visible in extreme ultraviolet light, helping us to see the struggle going on. There were no eruptions during this period, although active regions are usually the source for solar storms. The video clip covers just one day's worth of activity. Movies are available at http://photojournal.jpl.nasa.gov/catalog/PIA21109

  1. Jumpy Active Region

    NASA Image and Video Library

    2017-01-03

    A close-up view of one day in the life of a rather small active region shows the agitation and dynamism of its magnetic field (Dec. 21, 2016). This wavelength of extreme ultraviolet light reveals particles as they spin along the cascading arches of magnetic field lines above the active region. Some darker plasma rises up and spins around at the edge of the sun near the end of the video clip also being pulled by unseen magnetic forces. Movies are available at http://photojournal.jpl.nasa.gov/catalog/PIA15032

  2. CORAL: aligning conserved core regions across domain families.

    PubMed

    Fong, Jessica H; Marchler-Bauer, Aron

    2009-08-01

    Homologous protein families share highly conserved sequence and structure regions that are frequent targets for comparative analysis of related proteins and families. Many protein families, such as the curated domain families in the Conserved Domain Database (CDD), exhibit similar structural cores. To improve accuracy in aligning such protein families, we propose a profile-profile method CORAL that aligns individual core regions as gap-free units. CORAL computes optimal local alignment of two profiles with heuristics to preserve continuity within core regions. We benchmarked its performance on curated domains in CDD, which have pre-defined core regions, against COMPASS, HHalign and PSI-BLAST, using structure superpositions and comprehensive curator-optimized alignments as standards of truth. CORAL improves alignment accuracy on core regions over general profile methods, returning a balanced score of 0.57 for over 80% of all domain families in CDD, compared with the highest balanced score of 0.45 from other methods. Further, CORAL provides E-values to aid in detecting homologous protein families and, by respecting block boundaries, produces alignments with improved 'readability' that facilitate manual refinement. CORAL will be included in future versions of the NCBI Cn3D/CDTree software, which can be downloaded at http://www.ncbi.nlm.nih.gov/Structure/cdtree/cdtree.shtml. Supplementary data are available at Bioinformatics online.

  3. CORAL: aligning conserved core regions across domain families

    PubMed Central

    Fong, Jessica H.; Marchler-Bauer, Aron

    2009-01-01

    Motivation: Homologous protein families share highly conserved sequence and structure regions that are frequent targets for comparative analysis of related proteins and families. Many protein families, such as the curated domain families in the Conserved Domain Database (CDD), exhibit similar structural cores. To improve accuracy in aligning such protein families, we propose a profile–profile method CORAL that aligns individual core regions as gap-free units. Results: CORAL computes optimal local alignment of two profiles with heuristics to preserve continuity within core regions. We benchmarked its performance on curated domains in CDD, which have pre-defined core regions, against COMPASS, HHalign and PSI-BLAST, using structure superpositions and comprehensive curator-optimized alignments as standards of truth. CORAL improves alignment accuracy on core regions over general profile methods, returning a balanced score of 0.57 for over 80% of all domain families in CDD, compared with the highest balanced score of 0.45 from other methods. Further, CORAL provides E-values to aid in detecting homologous protein families and, by respecting block boundaries, produces alignments with improved ‘readability’ that facilitate manual refinement. Availability: CORAL will be included in future versions of the NCBI Cn3D/CDTree software, which can be downloaded at http://www.ncbi.nlm.nih.gov/Structure/cdtree/cdtree.shtml. Contact: fongj@ncbi.nlm.nih.gov. Supplementary information: Supplementary data are available at Bioinformatics online. PMID:19470584

  4. Comparative Genomics of the Aeromonadaceae Core Oligosaccharide Biosynthetic Regions

    PubMed Central

    Forn-Cuní, Gabriel; Merino, Susana; Tomás, Juan M.

    2017-01-01

    Lipopolysaccharides (LPSs) are an integral part of the Gram-negative outer membrane, playing important organizational and structural roles and taking part in the bacterial infection process. In Aeromonas hydrophila, piscicola, and salmonicida, three different genomic regions taking part in the LPS core oligosaccharide (Core-OS) assembly have been identified, although the characterization of these clusters in most aeromonad species is still lacking. Here, we analyse the conservation of these LPS biosynthesis gene clusters in the all the 170 currently public Aeromonas genomes, including 30 different species, and characterise the structure of a putative common inner Core-OS in the Aeromonadaceae family. We describe three new genomic organizations for the inner Core-OS genomic regions, which were more evolutionary conserved than the outer Core-OS regions, which presented remarkable variability. We report how the degree of conservation of the genes from the inner and outer Core-OS may be indicative of the taxonomic relationship between Aeromonas species. PMID:28264491

  5. Emission measure distribution for diffuse regions in solar active regions

    SciTech Connect

    Subramanian, Srividya; Tripathi, Durgesh; Klimchuk, James A.; Mason, Helen E.

    2014-11-01

    Our knowledge of the diffuse emission that encompasses active regions is very limited. In this paper we investigate two off-limb active regions, namely, AR 10939 and AR 10961, to probe the underlying heating mechanisms. For this purpose, we have used spectral observations from Hinode/EIS and employed the emission measure (EM) technique to obtain the thermal structure of these diffuse regions. Our results show that the characteristic EM distributions of the diffuse emission regions peak at log T = 6.25 and the coolward slopes are in the range 1.4-3.3. This suggests that both low- as well as high-frequency nanoflare heating events are at work. Our results provide additional constraints on the properties of these diffuse emission regions and their contribution to the background/foreground when active region cores are observed on-disk.

  6. Active region seismology

    NASA Technical Reports Server (NTRS)

    Bogdan, Tom; Braun, D. C.

    1995-01-01

    Active region seismology is concerned with the determination and interpretation of the interaction of the solar acoustic oscillations with near-surface target structures, such as magnetic flux concentration, sunspots, and plage. Recent observations made with a high spatial resolution and a long temporal duration enabled measurements of the scattering matrix for sunspots and solar active regions to be carried out as a function of the mode properties. Based on this information, the amount of p-mode absorption, partial-wave phase shift, and mode mixing introduced by the sunspot, could be determined. In addition, the possibility of detecting the presence of completely submerged magnetic fields was raised, and new procedures for performing acoustic holography of the solar interior are being developed. The accumulating evidence points to the mode conversion of p-modes to various magneto-atmospheric waves within the magnetic flux concentration as being the unifying physical mechanism responsible for these diverse phenomena.

  7. 12 CFR 940.3 - Core mission activities.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 12 Banks and Banking 7 2010-01-01 2010-01-01 false Core mission activities. 940.3 Section 940.3 Banks and Banking FEDERAL HOUSING FINANCE BOARD FEDERAL HOME LOAN BANK MISSION CORE MISSION ACTIVITIES § 940.3 Core mission activities. The following Bank activities qualify as core mission activities:...

  8. Classification of Proteus penneri lipopolysaccharides into core region serotypes.

    PubMed

    Palusiak, Agata

    2016-12-01

    The frequency of P. penneri isolation from hospital patients, mostly from urine and wounds, keeps on growing, and numerous isolates are multi-drug resistant. P. penneri rods produce lipopolysaccharide (LPS), which may lead to the septic shock. Until now, O-specific polysaccharide has been the best structurally and serologically characterized region of P. penneri LPS. It is worth having an insight into the serological specificity of both poly- and oligosaccharide parts of P. penneri LPS. The P. penneri core region is less structurally diverse than OPS, but still, among other enterobacterial LPS core regions, it is characterized by structural variability. In the present study, the serological reactivity of 25 P. penneri LPS core regions was analyzed by ELISA, passive immunohemolysis and Western blot technique using five polyclonal P. penneri antisera after or without their adsorption with the respective LPSs. The results allowed the assignment of the tested strains to five new core serotypes, which together with published serological studies led to the creation of the first serotyping scheme based on LPS core reactivities of 35 P. penneri and three P. mirabilis strains. Together with the O types scheme, it will facilitate assigning Proteus LPSs of clinical isolates into appropriate O and R serotypes.

  9. Tangled up Active Region

    NASA Image and Video Library

    2017-09-27

    This close-up image of the sun presents an active region in profile as it rotated out of view. We can observe both the bright arching field lines and smaller pieces of darker matter in their midst being pulled back and forth just above the Sun's surface over about 36 hours (July 20-22, 2011). Both of these physical responses were caused by strong, tangled magnetic forces that are constantly evolving and reorganizing within the active region. Other active regions can be seen in the foreground as well. The image and movie were taken in extreme ultraviolet light of ionized iron heated to one million degrees. To view a hd video of this event go here: www.flickr.com/photos/gsfc/6006013038 Credit: NASA/GSFC/SDO NASA Goddard Space Flight Center enables NASA’s mission through four scientific endeavors: Earth Science, Heliophysics, Solar System Exploration, and Astrophysics. Goddard plays a leading role in NASA’s accomplishments by contributing compelling scientific knowledge to advance the Agency’s mission. Follow us on Twitter Like us on Facebook Find us on Instagram

  10. Late Holocene fire activity recorded in a Greenland ice core

    NASA Astrophysics Data System (ADS)

    Zennaro, P.; Barbante, C.; Kehrwald, N.; Zangrando, R.; Gambaro, A.; Gabrieli, J.

    2012-04-01

    The pyrolysis compounds from the thermal decomposition of cellulose during burning events are the dominant smoke tracers in continental airsheds. Important compounds from biomass burning include monosaccharide anhydrides (MAs). Levoglucosan is a MA produced by combusing cellulose at a temperatures of 300°C or greater. Ice cores contain these specific molecular markers and other pyrochemical evidence that provides much-needed information on the role of fire in regions with no existing data of past fire activity. Here, we use atmospheric and snow levoglucosan concentrations to trace fire emissions from a boreal forest fire source in the Canadian Shield through transport and deposition at Summit, Greenland (72°35'N 38°25' W, 3048 masl). Atmospheric and surface samples suggest that levoglucosan in snow can record biomass burning events up to 1000s of kilometers away. Levoglucosan does degrade by interacting with hydroxyl radicals in the atmosphere, but it is emitted in large quantities, allowing the use as a biomass burning tracer. These quantified atmospheric biomass burning emissions and associated parallel oxalate and levoglucosan peaks in snow pit samples validates levoglucosan as a proxy for past biomass burning in snow records and by extension in ice cores. The temporal and spatial resolution of chemical markers in ice cores matches the core in which they are measured. The spatial resolution of chemical markers in ice cores depends on the core location where low-latitude ice cores primarily reflect regional climate parameters, and polar ice cores integrate hemispheric signals. We present levoglucosan flux, and hence past fire activity, measured during the late Holocene in the NEEM, Greenland (77°27' N; 51°3'W, 2454 masl) ice core. We compare the NEEM results with multiple major Northern Hemisphere climate and cultural parameters.

  11. Regional Variations of the Inner Core Attenuation Structure

    NASA Astrophysics Data System (ADS)

    Sun, X.; Qin, J.

    2016-12-01

    Three-dimensional velocity structure of the inner core has raised great challenge to the inner core formation and evolution mechanisms. Besides velocity, attenuation is also studied to help answering these questions. However, because of the waveform quality and limited earthquake-station distribution in high latitudes, attenuation studies are even harder. Previous inner core attenuation results showthat the shallow part of the inner core attenuation may have hemispherical differences and may change with depths, but the study areas are very limited, and conflictresults still exist. In this study, we systematically collect seismic data from global, regional and temporary seismic networks from year 1990 to 2014, in distance range of 146-156 degree. To ensure the quality of the data, we only chose earthquakes with magnitudesgreater than 5.5 and depths deeper than 50 km. After carefully checked the coverage of the good data, we finally select three regions (Australia, Africa and central Pacific) where PKP phases are generally good in both polar and equatorial directions to study inner core structure. During the data processing, we also compared different methods, such as spectral amplitude ratio of BC and DF, attenuation inversion from observed and synthetic data, to obtain the more reliable results. Our results show that the inner core velocity underneath Australia has no anisotropy, while Africa and central Pacific region have obvious anisotropy; Meanwhile, the average velocity is 0.5% faster underneath Australia, and 0.3% slower underneath Africa and central Pacific than AK135. For inner core attenuation structure, we have the following results: 1) Underneath Australia, Q value remain almost constant, ranging between 300-400, and show no anisotropy; 2) Underneath Africa and central Pacific, Q value change with depth, and show obvious anisotropy structure. Finally, we find that the velocity and attenuation in all three areas have good correlation, with fast velocity

  12. Core Muscle Activation in Suspension Training Exercises

    PubMed Central

    Cugliari, Giovanni

    2017-01-01

    Abstract A quantitative observational laboratory study was conducted to characterize and classify core training exercises executed in a suspension modality on the base of muscle activation. In a prospective single-group repeated measures design, seventeen active male participants performed four suspension exercises typically associated with core training (roll-out, bodysaw, pike and knee-tuck). Surface electromyographic signals were recorded from lower and upper parts of rectus abdominis, external oblique, internal oblique, lower and upper parts of erector spinae muscles using concentric bipolar electrodes. The average rectified values of electromyographic signals were normalized with respect to individual maximum voluntary isometric contraction of each muscle. Roll-out exercise showed the highest activation of rectus abdominis and oblique muscles compared to the other exercises. The rectus abdominis and external oblique reached an activation higher than 60% of the maximal voluntary contraction (or very close to that threshold, 55%) in roll-out and bodysaw exercises. Findings from this study allow the selection of suspension core training exercises on the basis of quantitative information about the activation of muscles of interest. Roll-out and bodysaw exercises can be considered as suitable for strength training of rectus abdominis and external oblique muscles. PMID:28469744

  13. Core Muscle Activation in Suspension Training Exercises.

    PubMed

    Cugliari, Giovanni; Boccia, Gennaro

    2017-02-01

    A quantitative observational laboratory study was conducted to characterize and classify core training exercises executed in a suspension modality on the base of muscle activation. In a prospective single-group repeated measures design, seventeen active male participants performed four suspension exercises typically associated with core training (roll-out, bodysaw, pike and knee-tuck). Surface electromyographic signals were recorded from lower and upper parts of rectus abdominis, external oblique, internal oblique, lower and upper parts of erector spinae muscles using concentric bipolar electrodes. The average rectified values of electromyographic signals were normalized with respect to individual maximum voluntary isometric contraction of each muscle. Roll-out exercise showed the highest activation of rectus abdominis and oblique muscles compared to the other exercises. The rectus abdominis and external oblique reached an activation higher than 60% of the maximal voluntary contraction (or very close to that threshold, 55%) in roll-out and bodysaw exercises. Findings from this study allow the selection of suspension core training exercises on the basis of quantitative information about the activation of muscles of interest. Roll-out and bodysaw exercises can be considered as suitable for strength training of rectus abdominis and external oblique muscles.

  14. Hydrophobic core flexibility modulates enzyme activity in HIV-1 protease

    PubMed Central

    Mittal, Seema; Cai, Yufeng; Nalam, Madhavi N.; Bolon, Daniel N. A.; Schiffer, Celia A.

    2012-01-01

    Human immunodeficiency virus Type-1 (HIV-1) protease is crucial for viral maturation and infectivity. Studies of protease dynamics suggest that the rearrangement of the hydrophobic core is essential for enzyme activity. Many mutations in the hydrophobic core are also associated with drug resistance and may modulate the core flexibility. To test the role of flexibility in protease activity, pairs of cysteines were introduced at the interfaces of flexible regions remote from the active site. Disulfide bond formation was confirmed by crystal structures and by alkylation of free cysteines and mass spectrometry. Oxidized and reduced crystal structures of these variants show the overall structure of the protease is retained. However, cross-linking the cysteines led to drastic loss in enzyme activity, which was regained upon reducing the disulfide cross-links. Molecular dynamics simulations showed that altered dynamics propagated throughout the enzyme from the engineered disulfide. Thus, altered flexibility within the hydrophobic core can modulate HIV-1 protease activity, supporting the hypothesis that drug resistant mutations distal from active site can alter the balance between substrate turnover and inhibitor binding by modulating enzyme activity. PMID:22295904

  15. Hydrophobic Core Flexibility Modulates Enzyme Activity in HIV-1 Protease

    SciTech Connect

    Mittal, Seema; Cai, Yufeng; Nalam, Madhavi N.L.; Bolon, Daniel N.A.; Schiffer, Celia A.

    2012-09-11

    Human immunodeficiency virus Type-1 (HIV-1) protease is crucial for viral maturation and infectivity. Studies of protease dynamics suggest that the rearrangement of the hydrophobic core is essential for enzyme activity. Many mutations in the hydrophobic core are also associated with drug resistance and may modulate the core flexibility. To test the role of flexibility in protease activity, pairs of cysteines were introduced at the interfaces of flexible regions remote from the active site. Disulfide bond formation was confirmed by crystal structures and by alkylation of free cysteines and mass spectrometry. Oxidized and reduced crystal structures of these variants show the overall structure of the protease is retained. However, cross-linking the cysteines led to drastic loss in enzyme activity, which was regained upon reducing the disulfide cross-links. Molecular dynamics simulations showed that altered dynamics propagated throughout the enzyme from the engineered disulfide. Thus, altered flexibility within the hydrophobic core can modulate HIV-1 protease activity, supporting the hypothesis that drug resistant mutations distal from the active site can alter the balance between substrate turnover and inhibitor binding by modulating enzyme activity.

  16. The Anatomical Society core regional anatomy syllabus for undergraduate medicine.

    PubMed

    Smith, C F; Finn, G M; Stewart, J; Atkinson, M A; Davies, D C; Dyball, R; Morris, J; Ockleford, C; Parkin, I; Standring, S; Whiten, S; Wilton, J; McHanwell, S

    2016-01-01

    The Anatomical Society's core syllabus for anatomy (2003 and later refined in 2007) set out a series of learning outcomes that an individual medical student should achieve on graduation. The core syllabus, with 182 learning outcomes grouped in body regions, referenced in the General Medical Council's Teaching Tomorrow's Doctors, was open to criticism on the grounds that the learning outcomes were generated by a relatively small group of anatomists, albeit some of whom were clinically qualified. We have therefore used a modified Delphi technique to seek a wider consensus. A Delphi panel was constructed involving 'experts' (n = 39). The revised core syllabus of 156 learning outcomes presented here is applicable to all medical programmes and may be used by curriculum planners, teachers and students alike in addressing the perennial question: 'What do I need to know ?'

  17. Active region flows

    NASA Technical Reports Server (NTRS)

    Foukal, Peter

    1987-01-01

    A wide range of observations has shown that active region phenomena in the photospheric, chromospheric and coronal temperature regimes are dynamical in nature. At the photosphere, recent observations of full line profiles place an upper limit of about + or - 20/msec on any downflows at supergranule cell edges. Observations of the full Stokes 5 profiles in the network show no evidence for downflows in magnetic flux tubes. In the area of chromospheric dynamics, several models were put forward recently to reproduce the observed behavior of spicules. However, it is pointed out that these adiabatic models do not include the powerful radiative dissipation which tend to damp out the large amplitude disturbances that produce the spicular acceleration in the models. In the corona, loop flows along field lines clearly transport mass and energy at rates important for the dynamics of these structures. However, advances in understanding the heating and mass balance of the loop structures seem to require new kinds of observations. Some results are presented using a remote sensing diagnostic of the intensity and orientation of macroscopic plasma electric fields predicted by models of reconnective heating and also wave heating.

  18. Hydrocarbons near the Cores of Massive Star-Forming Regions

    NASA Astrophysics Data System (ADS)

    Jiang, Xue-Jian

    2015-08-01

    Chemical models suggest that the reduced abundance of the abundant molecular species C2H can be the signpost of the heated molecular gas in the ˜104 AU vicinity around embedded high-mass stars. High angular resolution observations of C2H and other simple hydrocanbons therefore may offer valuable diagnose of embedded star-forming activities. With the aid of single dish (Delingha, CSO, JCMT) and interferometric (SMA and CARMA) observations of C2H, C3H, HC3N, etc., and mm continuum emission towards a few OB cluster-forming regions AFGL 490, ON 1, W33 Main, and G10.6-0.4, which cover a broad range of bolometric luminosity (˜103-106 L⊙). We found that on large scales, the C2H line emission traces the dense molecular gas envelope. However, for all observed sources, the C2H emission peaks are offset by several times 104 AU from the 1.1 mm continuum emission peaks, at which the most luminous stars are located. The C2H hyperfine lines and the 1.1 mm continuum emission show that the C2H column density (and abundances) around the continuum peaks is lower than those in the ambient gas envelope. Our results support the theoretical prediction for centrally embedded ˜103-106 L⊙ OB star-forming cores, while future higher resolution observations, as well as comparison with elaborate chemical models are required to examine the behavior of hydrocarbons around the localized sites of high-mass star-formation.

  19. Twenty Years of Active Bacterial Core Surveillance

    PubMed Central

    Schaffner, William; Farley, Monica M.; Lynfield, Ruth; Bennett, Nancy M.; Reingold, Arthur; Thomas, Ann; Harrison, Lee H.; Nichols, Megin; Petit, Susan; Miller, Lisa; Moore, Matthew R.; Schrag, Stephanie J.; Lessa, Fernanda C.; Skoff, Tami H.; MacNeil, Jessica R.; Briere, Elizabeth C.; Weston, Emily J.; Van Beneden, Chris

    2015-01-01

    Active Bacterial Core surveillance (ABCs) was established in 1995 as part of the Centers for Disease Control and Prevention Emerging Infections Program (EIP) network to assess the extent of invasive bacterial infections of public health importance. ABCs is distinctive among surveillance systems because of its large, population-based, geographically diverse catchment area; active laboratory-based identification of cases to ensure complete case capture; detailed collection of epidemiologic information paired with laboratory isolates; infrastructure that allows for more in-depth investigations; and sustained commitment of public health, academic, and clinical partners to maintain the system. ABCs has directly affected public health policies and practices through the development and evaluation of vaccines and other prevention strategies, the monitoring of antimicrobial drug resistance, and the response to public health emergencies and other emerging infections. PMID:26292067

  20. Selective dissociation between core and extended regions of the face processing network in congenital prosopagnosia.

    PubMed

    Avidan, Galia; Tanzer, Michal; Hadj-Bouziane, Fadila; Liu, Ning; Ungerleider, Leslie G; Behrmann, Marlene

    2014-06-01

    There is growing consensus that accurate and efficient face recognition is mediated by a neural circuit composed of a posterior "core" and an anterior "extended" set of regions. Here, we characterize the distributed face network in human individuals with congenital prosopagnosia (CP)-a lifelong impairment in face processing-relative to that of matched controls. Using functional magnetic resonance imaging, we first uncover largely normal activation patterns in the posterior core face patches in CP. We also document normal activity of the amygdala (emotion processing) as well as normal or even enhanced functional connectivity between the amygdala and the core regions. Critically, in the same individuals, activation of the anterior temporal cortex (identity processing) is reduced and connectivity between this region and the posterior core regions is disrupted. The dissociation between the neural profiles of the anterior temporal lobe and amygdala was evident both during a task-related face scan and during a resting state scan, in the absence of visual stimulation. Taken together, these findings elucidate selective disruptions in neural circuitry in CP and offer an explanation for the known differential difficulty in identity versus emotional expression recognition in many individuals with CP.

  1. Nuclear factor Y regulates ancient budgerigar hepadnavirus core promoter activity.

    PubMed

    Shen, Zhongliang; Liu, Yanfeng; Luo, Mengjun; Wang, Wei; Liu, Jing; Liu, Wei; Pan, Shaokun; Xie, Youhua

    2016-09-16

    Endogenous viral elements (EVE) in animal genomes are the fossil records of ancient viruses and provide invaluable information on the origin and evolution of extant viruses. Extant hepadnaviruses include avihepadnaviruses of birds and orthohepadnaviruses of mammals. The core promoter (Cp) of hepadnaviruses is vital for viral gene expression and replication. We previously identified in the budgerigar genome two EVEs that contain the full-length genome of an ancient budgerigar hepadnavirus (eBHBV1 and eBHBV2). Here, we found eBHBV1 Cp and eBHBV2 Cp were active in several human and chicken cell lines. A region from nt -85 to -11 in eBHBV1 Cp was critical for the promoter activity. Bioinformatic analysis revealed a putative binding site of nuclear factor Y (NF-Y), a ubiquitous transcription factor, at nt -64 to -50 in eBHBV1 Cp. The NF-Y core binding site (ATTGG, nt -58 to -54) was essential for eBHBV1 Cp activity. The same results were obtained with eBHBV2 Cp and duck hepatitis B virus Cp. The subunit A of NF-Y (NF-YA) was recruited via the NF-Y core binding site to eBHBV1 Cp and upregulated the promoter activity. Finally, the NF-Y core binding site is conserved in the Cps of all the extant avihepadnaviruses but not of orthohepadnaviruses. Interestingly, a putative and functionally important NF-Y core binding site is located at nt -21 to -17 in the Cp of human hepatitis B virus. In conclusion, our findings have pinpointed an evolutionary conserved and functionally critical NF-Y binding element in the Cps of avihepadnaviruses.

  2. Elementary bipoles of active regions and ephemeral active regions

    NASA Technical Reports Server (NTRS)

    Martin, Sara F.

    1990-01-01

    The general properties of elementary bipoles (EBs), the class of moving magnetic features identified by Frazier (1972) as building blocks of new solar active regions, are described, and variations in their characteristics are illustrated with extensive videomagnetograms obtained at Big Bear Solar Observatory during 1984-1989. Consideration is given to ephemeral active regions consisting of EBs with only one positive and one negative pole, multiple-pole ephemeral regions, reversed-polarity EBs, interactions among EBs and adjacent magnetic features, and the EBs of small and medium active regions. The detection of EBs prior to the appearance of arch filaments confirms the relationship found by Frazier.

  3. Regional Activities Division. Papers.

    ERIC Educational Resources Information Center

    International Federation of Library Associations, The Hague (Netherlands).

    Papers on library network activities in Canada, the Third World, Japan, Malaysia, Brazil, and Sweden which were presented at the 1982 International Federation of Library Associations (IFLA) conference include: (1) "Canada: A Voluntary and Flexible Network," a review by Guy Sylvestre of the political, social, and economic structures…

  4. Regional Activities Division. Papers.

    ERIC Educational Resources Information Center

    International Federation of Library Associations, The Hague (Netherlands).

    Papers on library network activities in Canada, the Third World, Japan, Malaysia, Brazil, and Sweden which were presented at the 1982 International Federation of Library Associations (IFLA) conference include: (1) "Canada: A Voluntary and Flexible Network," a review by Guy Sylvestre of the political, social, and economic structures…

  5. Unexpected fireworks! Active region 808

    NASA Astrophysics Data System (ADS)

    Roberts, Harry

    2005-12-01

    The activity in 2005 September of the large sunspot group 10808 is discussed. This was the return of active region 10798 of the previous month. That such activity on the Sun continued despite the proximity of Solar Minimum adds to the excitement and interest of these regions. Observations in hydrogen alpha light enable detailed phenomenon to be followed both on and off the Sun's disc.

  6. Selective Dissociation Between Core and Extended Regions of the Face Processing Network in Congenital Prosopagnosia

    PubMed Central

    Avidan, Galia; Tanzer, Michal; Hadj-Bouziane, Fadila; Liu, Ning; Ungerleider, Leslie G.; Behrmann, Marlene

    2014-01-01

    There is growing consensus that accurate and efficient face recognition is mediated by a neural circuit composed of a posterior “core” and an anterior “extended” set of regions. Here, we characterize the distributed face network in human individuals with congenital prosopagnosia (CP)—a lifelong impairment in face processing—relative to that of matched controls. Using functional magnetic resonance imaging, we first uncover largely normal activation patterns in the posterior core face patches in CP. We also document normal activity of the amygdala (emotion processing) as well as normal or even enhanced functional connectivity between the amygdala and the core regions. Critically, in the same individuals, activation of the anterior temporal cortex (identity processing) is reduced and connectivity between this region and the posterior core regions is disrupted. The dissociation between the neural profiles of the anterior temporal lobe and amygdala was evident both during a task-related face scan and during a resting state scan, in the absence of visual stimulation. Taken together, these findings elucidate selective disruptions in neural circuitry in CP and offer an explanation for the known differential difficulty in identity versus emotional expression recognition in many individuals with CP. PMID:23377287

  7. Active Region Release Two CMEs

    NASA Image and Video Library

    Solar material can be seen blowing off the sun in this video captured by NASA’s Solar Dynamics Observatory (SDO) on the night of Feb. 5, 2013. This active region on the sun sent out two coronal ...

  8. Active Region Segmentation Based on Stokes Asymmetries

    NASA Astrophysics Data System (ADS)

    Choi, Jieun; Harker-Lundberg, B.

    2011-01-01

    During the Stokes inversion process, we would ideally use a distinct model for each structure in an active region which addresses the differences in the physical conditions of these regions. While the Milne-Eddington model of the atmosphere---a frequently-used ideal model that assumes all local thermodynamic equilibrium (LTE) conditions are satisfied---is a sufficient approximation for the description of the solar photosphere, we almost always observe deviations from this model. It is thus of interest to devise a method to systematically and accurately identify the active regions based on their spectra, such that we could use a more sophisticated model catered to each structure in an active region during the actual Stokes inversion process. We present a classification scheme for different active region structures using Stokes asymmetries and line core depths as discriminators. The data used for this investigation were obtained from the Synoptic Optical Long-term Investigations of the Sun (SOLIS) facility using the Vector Spectromagnetograph (VSM), observed in a 3 A bandpass around Fe I 6302.5 A, from March 27, 2008 to March 29, 2008. This work is carried out through the National Solar Observatory Research Experiences for Undergraduate (REU) site program, which is co-funded by the Department of Defense in partnership with the National Science Foundation REU Program. The National Solar Observatory is operated by the Association of Universities for Research in Astronomy, Inc. (AURA) under cooperative agreement with the National Science Foundation.

  9. CME Productivity of Active Regions.

    NASA Astrophysics Data System (ADS)

    Liu, L.; Wang, Y.; Wang, J.; Shen, C.; Ye, P.; Zhang, Q.; Liu, R.; Wang, S.

    2015-12-01

    Solar active regions (ARs) are the major sources of two kinds of the most violent solar eruptions, namely flares and coronal mass ejections (CMEs). Although they are believed to be two phenomena in the same eruptive process, the productivity of them could be quiet different for various ARs. Why is an AR productive? And why is a flare-rich AR CME-poor? To answer these questions, we compared the recent super flare-rich but CME-poor AR 12192, with other four ARs; two were productive in both flares and CMEs and the other two were inert to produce any M-class or intenser flares or CMEs. By investigating the photospheric parameters based on the SDO/HMI vector magnetogram, we find the three productive ARs have larger magnetic flux, current and free magnetic energy than the inert ARs. Furthermore, the two ARs productive in both flares and CMEs contain higher current helicity, concentrating along both sides of the flaring neutral lines, indicating the presence of a seed magnetic structure( that is highly sheared or twisted) of a CME; they also have higher decay index in the low corona, showing weak constraint. The results suggest that productive ARs are always large and have strong current system and sufficient free energy to power flares, and more importantly whether or not a flare is accompanied by a CME is seemingly related to (1) if there is significant sheared or twisted core field serving as the seed of the CME and (2) if the constraint of the overlying arcades is weak enough. Moreover, some productive ARs may frequently produce more than one CME. How does this happen? We do a statistical investigation of waiting times of quasi-homologous CMEs ( CME ssuccessive originating from the same ARs within short intervals) from super ARs in solar cycle 23 to answer this question. The waiting times of quasi-homologous CMEs have a two-component distribution with a separation at about 18 hours, the first component peaks at 7 hours. The correlation analysis among CME waiting times

  10. Regional climate signal modified by local factors - multi core study records (Lake Czechowskie region, N Poland)

    NASA Astrophysics Data System (ADS)

    Zawiska, Izabela; Rzodkiewicz, Monika; Noryśkiewicz, Agnieszka; Kramkowski, Mateusz; Obremska, Milena; Ott, Florian; Plessen, Birgit; Tjallingii, Rik; Słowiński, Michał; Błaszkiewicz, Mirosław; Brauer, Achim

    2016-04-01

    Lake sediments can be utilized as valuable paleoclimate and environmental archives as they contain information of past changes. Multi-proxy analyses of sedimentary compartments (e.g. pollen, diatoms, Cladocera) reveal those changes. However, to decipher the spatial variability of past climate changes and to define the proxies suited for local and regional scale reconstructions archive comparisons are needed. Here we present a detailed multi-proxy study from four different sediment cores covering the Younger Dryas cold period from the Lake Czechowskie region (N Poland). Three cores are located along a transect in the Lake Czechowskie basin from its deepest point towards a former lake bay close to today's shoreline. The fourth lacustrine sediment core was retrieved from the Trzechowskie paleolake, app. 1 km W from Lake Czechowskie. The dataset comprises information from pollen (AP, NAP, Juniperus, Betula-tree, Pinus silvestris), diatom (planktonic/benthic index, diatom valve concentration, dominant species), Cladocera (planktonic/benthic index, dominant species, number of Cladocera species, total sum of specimens) and geochemical (TOC and CaCO3 content, mineral matter, titanium) analyses. At the beginning of the Younger Dryas the AP pollen share decreased and NAP and Juniperus pollen increased in all studied locations. The mineral matter and titanium record showed higher values in two cores taken from the deepest parts of Lake Czechowskie and the core from Trzechowskie paleolake while in the core located at the marginal part of the lake it was already high in Allerød and it did not change much in Younger Dryas. The Cladocera based indexes: total sum of specimens and number of species decreased at the beginning of YD but on the contrary the Cladocera species composition changes were site-specific. The diatoms valve concentration index significantly lowered in core from the deep location while on the contrary increased in core from paleolake Trzechowskie. Our results

  11. Activation mechanism of the nuclear chaperone nucleoplasmin: role of the core domain.

    PubMed

    Bañuelos, Sonia; Hierro, Aitor; Arizmendi, Jesús M; Montoya, Guillermo; Prado, Adelina; Muga, Arturo

    2003-11-28

    Nucleoplasmin (NP) mediates nucleosome assembly by removing basic proteins from sperm chromatin and exchanging them with histones. This function is modulated by phosphorylation of NP at multiple sites. NP is pentameric, each monomer consisting of two domains: a core, which forms a stable ring-like pentamer, and a tail, that holds a polyglutamic tract and the nuclear localization signal. In the present study, we have explored the role of the core domain in the functionality of NP. Despite lacking the poly-Glu region, a putative binding site for basic proteins, the isolated core domain of the hyperphosphorylated protein isolated from eggs of Xenopus laevis is able to bind sperm basic proteins and decondense chromatin, in contrast to the inactive, non-phosphorylated recombinant core. This activity can be reproduced artificially in the recombinant core domain through mutation of putative phosphorylation sites to aspartate, thus mimicking the charge effect of phosphorylation. The mutated residues locate in flexible or loop regions exposed on the "distal face" of the core pentamer, where a short acidic region is also found, indicating that phosphorylation might activate the core domain of NP by generating a strong localized negative potential. Our results show that the phosphorylated core domain of NP is active in chromatin decondensation, thus it could contribute together with the poly-Glu containing tail in displaying a binding surface for sperm basic proteins on the NP pentamer.

  12. Earthquake Activity in the North Greenland Region

    NASA Astrophysics Data System (ADS)

    Larsen, Tine B.; Dahl-Jensen, Trine; Voss, Peter H.

    2017-04-01

    Many local and regional earthquakes are recorded on a daily basis in northern Greenland. The majority of the earthquakes originate at the Arctic plate boundary between the Eurasian and the North American plates. Particularly active regions away from the plate boundary are found in NE Greenland and in northern Baffin Bay. The seismograph coverage in the region is sparse with the main seismograph stations located at the military outpost, Stations Nord (NOR), the weather station outpost Danmarkshavn (DAG), Thule Airbase (TULEG), and the former ice core drilling camp (NEEM) in the middle of the Greenland ice sheet. Furthermore, data is available from Alert (ALE), Resolute (RES), and other seismographs in northern Canada as well as from a temporary deployment of BroadBand seismographs along the north coast of Greenland from 2004 to 2007. The recorded earthquakes range in magnitude from less than 2 to a 4.8 event, the largest in NE Greenland, and a 5.7 event, the largest recorded in northern Baffin Bay. The larger events are recorded widely in the region allowing for focal mechanisms to be calculated. Only a few existing focal mechanisms for the region can be found in the ISC bulletin. Two in NE Greenland representing primarily normal faulting and one in Baffin Bay resulting from reverse faulting. New calculations of focal mechanisms for the region will be presented as well as improved hypocenters resulting from analysis involving temporary stations and regional stations that are not included in routine processing.

  13. The effects of therapeutic hip exercise with abdominal core activation on recruitment of the hip muscles.

    PubMed

    Chan, Mandy Ky; Chow, Ka Wai; Lai, Alfred Ys; Mak, Noble Kc; Sze, Jason Ch; Tsang, Sharon Mh

    2017-07-21

    Core stabilization has been utilized for rehabilitation and prevention of lower limb musculoskeletal injuries. Previous studies showed that activation of the abdominal core muscles enhanced the hip muscle activity in hip extension and abduction exercises. However, the lack of the direct measurement and quantification of the activation level of the abdominal core muscles during the execution of the hip exercises affect the level of evidence to substantiate the proposed application of core exercises to promote training and rehabilitation outcome of the hip region. The aim of the present study was to examine the effects of abdominal core activation, which is monitored directly by surface electromyography (EMG), on hip muscle activation while performing different hip exercises, and to explore whether participant characteristics such as gender, physical activity level and contractile properties of muscles, which is assessed by tensiomyography (TMG), have confounding effect to the activation of hip muscles in enhanced core condition. Surface EMG of bilateral internal obliques (IO), upper gluteus maximus (UGMax), lower gluteus maximus (LGMax), gluteus medius (GMed) and biceps femoris (BF) of dominant leg was recorded in 20 young healthy subjects while performing 3 hip exercises: Clam, side-lying hip abduction (HABD), and prone hip extension (PHE) in 2 conditions: natural core activation (NC) and enhanced core activation (CO). EMG signals normalized to percentage of maximal voluntary isometric contraction (%MVIC) were compared between two core conditions with the threshold of the enhanced abdominal core condition defined as >20%MVIC of IO. Enhanced abdominal core activation has significantly promoted the activation level of GMed in all phases of clam exercise (P < 0.05), and UGMax in all phases of PHE exercise (P < 0.05), LGMax in eccentric phases of all 3 exercises (P < 0.05), and BF in all phases of all 3 exercises except the eccentric phase of PHE exercise (P

  14. Structure of the protein core of the glypican Dally-like and localization of a region important for hedgehog signaling

    SciTech Connect

    Kim, Min-Sung; Saunders, Adam M.; Hamaoka, Brent Y.; Beachy, Philip A.; Leahy, Daniel J.

    2011-09-20

    Glypicans are heparan sulfate proteoglycans that modulate the signaling of multiple growth factors active during animal development, and loss of glypican function is associated with widespread developmental abnormalities. Glypicans consist of a conserved, approximately 45-kDa N-terminal protein core region followed by a stalk region that is tethered to the cell membrane by a glycosyl-phosphatidylinositol anchor. The stalk regions are predicted to be random coil but contain a variable number of attachment sites for heparan sulfate chains. Both the N-terminal protein core and the heparan sulfate attachments are important for glypican function. We report here the 2.4-{angstrom} crystal structure of the N-terminal protein core region of the Drosophila glypican Dally-like (Dlp). This structure reveals an elongated, {alpha}-helical fold for glypican core regions that does not appear homologous to any known structure. The Dlp core protein is required for normal responsiveness to Hedgehog (Hh) signals, and we identify a localized region on the Dlp surface important for mediating its function in Hh signaling. Purified Dlp protein core does not, however, interact appreciably with either Hh or an Hh:Ihog complex.

  15. The Limit of Free Magnetic Energy in Active Regions

    NASA Technical Reports Server (NTRS)

    Moore, Ron; Falconer, David; Sterling, Alphonse

    2012-01-01

    By measuring from active-region magnetograms a proxy of the free energy in the active region fs magnetic field, it has been found previously that (1) there is an abrupt upper limit to the free energy the field can hold that increases with the amount of magnetic field in the active region, the active region fs magnetic flux content, and (2) the free energy is usually near its limit when the field explodes in a CME/flare eruption. That is, explosive active regions are concentrated in a main-sequence path bordering the free-energy ]limit line in (flux content, free-energy proxy) phase space. Here, from measurement of Marshall Space Flight Center vector magnetograms, we find the magnetic condition that underlies the free ]energy limit and the accompanying main sequence of explosive active regions. Using a suitable free ]energy proxy measured from vector magnetograms of 44 active regions, we find that (1) in active regions at and near their free ]energy limit, the ratio of magnetic-shear free energy to the non ]free magnetic energy the potential field would have is approximately 1 in the core field, the field rooted along the neutral line, and (2) this ratio is progressively less in active regions progressively farther below their free ]energy limit. This shows that most active regions in which this core-field energy ratio is much less than 1 cannot be triggered to explode; as this ratio approaches 1, most active regions become capable of exploding; and when this ratio is 1 or greater, most active regions are compelled to explode. From these results we surmise the magnetic condition that determines the free ]energy limit is the ratio of the free magnetic energy to the non-free energy the active region fs field would have were it completely relaxed to its potential ]field configuration, and that this ratio is approximately 1 at the free-energy limit and in the main sequence of explosive active regions.

  16. Systematic review of core muscle activity during physical fitness exercises.

    PubMed

    Martuscello, Jason M; Nuzzo, James L; Ashley, Candi D; Campbell, Bill I; Orriola, John J; Mayer, John M

    2013-06-01

    A consensus has not been reached among strength and conditioning specialists regarding what physical fitness exercises are most effective to stimulate activity of the core muscles. Thus, the purpose of this article was to systematically review the literature on the electromyographic (EMG) activity of 3 core muscles (lumbar multifidus, transverse abdominis, quadratus lumborum) during physical fitness exercises in healthy adults. CINAHL, Cochrane Central Register of Controlled Trials, EMBASE, PubMed, SPORTdiscus, and Web of Science databases were searched for relevant articles using a search strategy designed by the investigators. Seventeen studies enrolling 252 participants met the review's inclusion/exclusion criteria. Physical fitness exercises were partitioned into 5 major types: traditional core, core stability, ball/device, free weight, and noncore free weight. Strength of evidence was assessed and summarized for comparisons among exercise types. The major findings of this review with moderate levels of evidence indicate that lumbar multifidus EMG activity is greater during free weight exercises compared with ball/device exercises and is similar during core stability and ball/device exercises. Transverse abdominis EMG activity is similar during core stability and ball/device exercises. No studies were uncovered for quadratus lumborum EMG activity during physical fitness exercises. The available evidence suggests that strength and conditioning specialists should focus on implementing multijoint free weight exercises, rather than core-specific exercises, to adequately train the core muscles in their athletes and clients.

  17. SDO Sees Active Region Outbursts

    NASA Image and Video Library

    This close up video by NASA’s Solar Dynamics Observatory shows an active region near the right-hand edge of the sun’s disk, which erupted with at least a dozen minor events over a 30-hour period fr...

  18. Human monoclonal antibodies that recognize conserved epitopes in the core-lipid A region of lipopolysaccharides.

    PubMed Central

    Pollack, M; Raubitschek, A A; Larrick, J W

    1987-01-01

    Epstein-Barr virus (EBV)-transformed human B lymphocytes were fused with a murine-human heteromyeloma to produce stable hybrid cell lines that secreted human monoclonal antibodies (mAbs) of the IgM class that recognized conserved epitopes in the core-lipid A region of lipopolysaccharides (LPS). Three of the mAbs reacted with epitopes on the lipid A moiety, while a fourth recognized a determinant in the core oligosaccharide. The lipid A-specific mAbs cross-reacted with heterologous rough LPS and with lipid As released by acid hydrolysis of different intact (smooth) LPS. Carbohydrate groups in the O-side chain and core oligosaccharide of isolated, smooth LPS restricted antibody access to antigenic sites on lipid A. Yet, one lipid A-reactive mAb recognized its epitope on the surfaces of a variety of intact bacteria. These findings confirm the presence of highly conserved epitopes in the core-lipid A complex and prove the existence of human B cell clones with the potential for secreting high avidity IgM antibodies that react with these widely shared determinants. Such human mAbs might provide protective activity against disease caused by diverse gram-negative bacteria. Images PMID:2437155

  19. Structural Characterization of Core Region in Erwinia amylovora Lipopolysaccharide

    PubMed Central

    Casillo, Angela; Ziaco, Marcello; Lindner, Buko; Merino, Susana; Mendoza-Barberá, Elena; Tomás, Juan M.; Corsaro, Maria Michela

    2017-01-01

    Erwinia amylovora (E. amylovora) is the first bacterial plant pathogen described and demonstrated to cause fire blight, a devastating plant disease affecting a wide range of species including a wide variety of Rosaceae. In this study, we reported the lipopolysaccharide (LPS) core structure from E. amylovora strain CFBP1430, the first one for an E. amylovora highly pathogenic strain. The chemical characterization was performed on the mutants waaL (lacking only the O-antigen LPS with a complete LPS-core), wabH and wabG (outer-LPS core mutants). The LPSs were isolated from dry cells and analyzed by means of chemical and spectroscopic methods. In particular, they were subjected to a mild acid hydrolysis and/or a hydrazinolysis and investigated in detail by one and two dimensional Nuclear Magnetic Resonance (NMR) spectroscopy and ElectroSpray Ionization Fourier Transform-Ion Cyclotron Resonance (ESI FT-ICR) mass spectrometry. PMID:28273861

  20. Structural Characterization of Core Region in Erwinia amylovora Lipopolysaccharide.

    PubMed

    Casillo, Angela; Ziaco, Marcello; Lindner, Buko; Merino, Susana; Mendoza-Barberá, Elena; Tomás, Juan M; Corsaro, Maria Michela

    2017-03-04

    Erwinia amylovora (E. amylovora) is the first bacterial plant pathogen described and demonstrated to cause fire blight, a devastating plant disease affecting a wide range of species including a wide variety of Rosaceae. In this study, we reported the lipopolysaccharide (LPS) core structure from E. amylovora strain CFBP1430, the first one for an E. amylovora highly pathogenic strain. The chemical characterization was performed on the mutants waaL (lacking only the O-antigen LPS with a complete LPS-core), wabH and wabG (outer-LPS core mutants). The LPSs were isolated from dry cells and analyzed by means of chemical and spectroscopic methods. In particular, they were subjected to a mild acid hydrolysis and/or a hydrazinolysis and investigated in detail by one and two dimensional Nuclear Magnetic Resonance (NMR) spectroscopy and ElectroSpray Ionization Fourier Transform-Ion Cyclotron Resonance (ESI FT-ICR) mass spectrometry.

  1. Decay of Solar Active Regions

    NASA Technical Reports Server (NTRS)

    Hathaway, David H.; Choudhary, Debi Prasad

    2005-01-01

    We examine the record of sunspot group areas observed over a period of 100 years to determine the rate of decay of solar active regions. We exclude observations of groups when they are more than 60deg in longitude from the central meridian and only include data when at least three days of observations are available following the date of maximum area for a spot group's disk passage. This leaves data for some 24,000 observations of active region decay. We find that the decay rate is a constant 20 microHem/day for spots smaller than about 200 microHem (about the size of a supergranule). This decay rate increases linearly to about 90 microHem/day for spots with areas of 1000 microHem. We find no evidence for significant variations in active region decay from one solar cycle to another. However, we do find that the decay rate is slower at lower latitudes. This gives a slower decay rate during the declining phase of sunspot cycles.

  2. Decay of Solar Active Regions

    NASA Technical Reports Server (NTRS)

    Hathaway, David H.; Choudhary, Debi Prasad

    2005-01-01

    We examine the record of sunspot group areas observed over a period of 100 years to determine the rate of decay of solar active regions. We exclude observations of groups when they are more than 60deg in longitude from the central meridian and only include data when at least three days of observations are available following the date of maximum area for a spot group's disk passage. This leaves data for some 24,000 observations of active region decay. We find that the decay rate is a constant 20 microHem/day for spots smaller than about 200 microHem (about the size of a supergranule). This decay rate increases linearly to about 90 microHem/day for spots with areas of 1000 microHem. We find no evidence for significant variations in active region decay from one solar cycle to another. However, we do find that the decay rate is slower at lower latitudes. This gives a slower decay rate during the declining phase of sunspot cycles.

  3. The structure of nucleosomal core particles within transcribed and repressed gene regions.

    PubMed Central

    Studitsky, V M; Belyavsky, A V; Melnikova, A F; Mirzabekov, A D

    1988-01-01

    The arrangement of histones along DNA in nucleosomal core particles within transcribed heat shock gene (hsp 70) region and repressed insertion within ribosomal genes of Drosophila was analysed by using protein-DNA crosslinking methods combined with hybridization tests. In addition, two-dimensional gel electrophoresis was employed to compare the overall nucleosomal shape and the nucleosomal DNA size. The arrangement of histones along DNA and general compactness of nucleosomes were shown to be rather similar in transcriptionally active and inactive genomic regions. On the other hand, nucleosomes within transcriptionally active chromatin are characterized by a larger size of nucleosomal DNA produced by micrococcal nuclease digestion and some peculiarity in electrophoretic mobility. Images PMID:3144704

  4. Single-domain intrabodies against hepatitis C virus core inhibit viral propagation and core-induced NFκB activation.

    PubMed

    Suzuki, Ryosuke; Saito, Kenji; Matsuda, Mami; Sato, Mitsuru; Kanegae, Yumi; Shi, Guoli; Watashi, Koichi; Aizaki, Hideki; Chiba, Joe; Saito, Izumu; Wakita, Takaji; Suzuki, Tetsuro

    2016-04-01

    Hepatitis C virus (HCV) core plays a key role in viral particle formation and is involved in viral pathogenesis. Here, constructs for single-domain intrabodies consisting of variable regions derived from mouse mAbs against HCV core were established. Expressed single-domain intrabodies were shown to bind to HCV core, and inhibit the growth of cell culture-produced HCV derived from JFH-1 (genotype 2a) and a TH (genotype 1b)/JFH-1 chimera. Adenovirus vectors expressing intrabodies were also capable of reducing HCV propagation. Intrabody expression did not affect viral entry or genome replication of single-round infectious trans-complemented HCV particles. However, intrabody expression reduced intracellular and extracellular infectious titres in CD81-defective Huh7-25 cells transfected with the HCV genome, suggesting that these intrabodies impair HCV assembly. Furthermore, intrabody expression suppressed HCV core-induced NFκB promoter activity. These intrabodies may therefore serve as tools for elucidating the role of core in HCV pathogenesis.

  5. Solar active region display system

    NASA Astrophysics Data System (ADS)

    Golightly, M.; Raben, V.; Weyland, M.

    2003-04-01

    The Solar Active Region Display System (SARDS) is a client-server application that automatically collects a wide range of solar data and displays it in a format easy for users to assimilate and interpret. Users can rapidly identify active regions of interest or concern from color-coded indicators that visually summarize each region's size, magnetic configuration, recent growth history, and recent flare and CME production. The active region information can be overlaid onto solar maps, multiple solar images, and solar difference images in orthographic, Mercator or cylindrical equidistant projections. Near real-time graphs display the GOES soft and hard x-ray flux, flare events, and daily F10.7 value as a function of time; color-coded indicators show current trends in soft x-ray flux, flare temperature, daily F10.7 flux, and x-ray flare occurrence. Through a separate window up to 4 real-time or static graphs can simultaneously display values of KP, AP, daily F10.7 flux, GOES soft and hard x-ray flux, GOES >10 and >100 MeV proton flux, and Thule neutron monitor count rate. Climatologic displays use color-valued cells to show F10.7 and AP values as a function of Carrington/Bartel's rotation sequences - this format allows users to detect recurrent patterns in solar and geomagnetic activity as well as variations in activity levels over multiple solar cycles. Users can customize many of the display and graph features; all displays can be printed or copied to the system's clipboard for "pasting" into other applications. The system obtains and stores space weather data and images from sources such as the NOAA Space Environment Center, NOAA National Geophysical Data Center, the joint ESA/NASA SOHO spacecraft, and the Kitt Peak National Solar Observatory, and can be extended to include other data series and image sources. Data and images retrieved from the system's database are converted to XML and transported from a central server using HTTP and SOAP protocols, allowing

  6. Regional seismic variations in the inner core under the North Pacific

    NASA Astrophysics Data System (ADS)

    Irving, J. C. E.; Deuss, A.

    2015-12-01

    An asymmetry between a nearly isotropic, faster `eastern' hemisphere and an anisotropic, slower `western' hemisphere in Earth's inner core has been revealed by previous seismic studies. However, it remains unclear if division of the inner core into just two hemispheres is too simplistic. Here, we carry out regional-scale tomography using a new body wave data set to study the hemisphere boundary region beneath the northern and central Pacific Ocean and North America. If anisotropy is not considered, then a hemispherical pattern seems to be present in the study region, though the hemisphere boundary appears to be irregular. However, once the presence of anisotropy is permitted we find that this region cannot be simply separated into an anisotropic western hemisphere and an isotropic eastern hemisphere; instead the strength of the anisotropy varies regionally. The global hemispherical pattern is not observed here, instead the strongest anisotropy is observed in the centre and south west of the study region. Some of the strongest anisotropy appears to be in the `eastern' inner core, while part of the inner core assumed to be in the western hemisphere shows weaker anisotropy. Thus, this part of the inner core displays complex variations in anisotropy which differ from a simple hemispherical division. We suggest that a long-lived global heterogeneity, such as uneven heat flow through the core-mantle boundary over a period of hundreds of millions of years, may be responsible for the observed pattern of inner core anisotropy.

  7. Thiophene-Core Estrogen Receptor Ligands Having Superagonist Activity

    PubMed Central

    Min, Jian; Wang, Pengcheng; Srinivasan, Sathish; Nwachukwu, Jerome C.; Guo, Pu; Huang, Minjian; Carlson, Kathryn E.; Katzenellenbogen, John A.; Nettles, Kendall W.; Zhou, Hai-Bing

    2013-01-01

    To probe the importance of the heterocyclic core of estrogen receptor (ER) ligands, we prepared a series of thiophene-core ligands by Suzuki cross-coupling of aryl boronic acids with bromo-thiophenes, and we assessed their receptor binding and cell biological activities. The disposition of the phenol substituents on the thiophene core, at alternate or adjacent sites, and the nature of substituents on these phenols all contribute to binding affinity and subtype selectivity. Most of the bis(hydroxyphenyl)-thiophenes were ERβ selective, whereas the tris(hydroxyphenyl)-thiophenes were ERα selective; analogous furan-core compounds generally have lower affinity and less selectivity. Some diarylthiophenes show distinct superagonist activity in reporter gene assays, giving maximal activities 2–3 times that of estradiol, and modeling suggests that these ligands have a different interaction with a hydrogen-bonding residue in helix-11. Ligand-core modification may be a new strategy for developing ER ligands whose selectivity is based on having transcriptional activity greater than that of estradiol. PMID:23586645

  8. Evolution of active region outflows throughout an active region lifetime

    NASA Astrophysics Data System (ADS)

    Zangrilli, L.; Poletto, G.

    2016-10-01

    Context. We have shown previously that SOHO/UVCS data allow us to detect active region (AR) outflows at coronal altitudes higher than those reached by other instrumentation. These outflows are thought to be a component of the slow solar wind. Aims: Our purpose is to study the evolution of the outflows in the intermediate corona from AR 8100, from the time the AR first forms until it dissolves, after several transits at the solar limb. Methods: Data acquired by SOHO/UVCS at the time of the AR limb transits, at medium latitudes and at altitudes ranging from 1.5 to 2.3 R⊙, were used to infer the physical properties of the outflows through the AR evolution. To this end, we applied the Doppler dimming technique to UVCS spectra. These spectra include the H i Lyα line and the O vi doublet lines at 1031.9 and 1037.6 Å. Results: Plasma speeds and electron densities of the outflows were inferred over several rotations of the Sun. AR outflows are present in the newly born AR and persist throughout the entire AR life. Moreover, we found two types of outflows at different latitudes, both possibly originating in the same negative polarity area of the AR. We also analyzed the behavior of the Si xii 520 Å line along the UVCS slit in an attempt to reveal changes in the Si abundance when different regions are traversed. Although we found some evidence for a Si enrichment in the AR outflows, alternative interpretations are also plausible. Conclusions: Our results demonstrate that outflows from ARs are detectable in the intermediate corona throughout the whole AR lifetime. This confirms that outflows contribute to the slow wind.

  9. Refining multiple sequence alignments with conserved core regions

    PubMed Central

    Chakrabarti, Saikat; Lanczycki, Christopher J.; Panchenko, Anna R.; Przytycka, Teresa M.; Thiessen, Paul A.; Bryant, Stephen H.

    2006-01-01

    Accurate multiple sequence alignments of proteins are very important to several areas of computational biology and provide an understanding of phylogenetic history of domain families, their identification and classification. This article presents a new algorithm, REFINER, that refines a multiple sequence alignment by iterative realignment of its individual sequences with the predetermined conserved core (block) model of a protein family. Realignment of each sequence can correct misalignments between a given sequence and the rest of the profile and at the same time preserves the family's overall block model. Large-scale benchmarking studies showed a noticeable improvement of alignment after refinement. This can be inferred from the increased alignment score and enhanced sensitivity for database searching using the sequence profiles derived from refined alignments compared with the original alignments. A standalone version of the program is available by ftp distribution () and will be incorporated into the next release of the Cn3D structure/alignment viewer. PMID:16707662

  10. Core Muscle Activity, Exercise Preference, and Perceived Exertion during Core Exercise with Elastic Resistance versus Machine.

    PubMed

    Vinstrup, Jonas; Sundstrup, Emil; Brandt, Mikkel; Jakobsen, Markus D; Calatayud, Joaquin; Andersen, Lars L

    2015-01-01

    Objectives. To investigate core muscle activity, exercise preferences, and perceived exertion during two selected core exercises performed with elastic resistance versus a conventional training machine. Methods. 17 untrained men aged 26-67 years participated in surface electromyography (EMG) measurements of five core muscles during torso-twists performed from left to right with elastic resistance and in the machine, respectively. The order of the exercises was randomized and each exercise consisted of 3 repetitions performed at a 10 RM load. EMG amplitude was normalized (nEMG) to maximum voluntary isometric contraction (MVC). Results. A higher right erector spinae activity in the elastic exercise compared with the machine exercise (50% [95% CI 36-64] versus 32% [95% CI 18-46] nEMG) was found. By contrast, the machine exercise, compared with the elastic exercise, showed higher left external oblique activity (77% [95% CI 64-90] versus 54% [95% CI 40-67] nEMG). For the rectus abdominis, right external oblique, and left erector spinae muscles there were no significant differences. Furthermore, 76% preferred the torso-twist with elastic resistance over the machine exercise. Perceived exertion (Borg CR10) was not significantly different between machine (5.8 [95% CI 4.88-6.72]) and elastic exercise (5.7 [95% CI 4.81-6.59]). Conclusion. Torso-twists using elastic resistance showed higher activity of the erector spinae, whereas torso-twist in the machine resulted in higher activity of the external oblique. For the remaining core muscles the two training modalities induced similar muscular activation. In spite of similar perceived exertion the majority of the participants preferred the exercise using elastic resistance.

  11. Solar active region magnetic complexity

    NASA Astrophysics Data System (ADS)

    Nikbakhsh, Shabnam; Tanskanen, Eija; Hackman, Thomas

    2017-04-01

    We have studied the Mount Wilson Classification of solar Active Regions (ARs) for the period from 1996 to 2015. Sunspots are visual indicators of ARs where the solar magnetic field is disturbed. Major manifestations of solar magnetic activity, such as solar flares and Coronal Mass Ejections (CMEs), are associated with solar ARs. There has been so many attempts to classify solar ARs based on their magnetic complexity as a measure of their acitivity. For this study we applied the Mount Wilson Classification which groups ARs in terms of their magnetic complexity from the least complex alpha to the most complex one beta-gamma-delta. We compared the magnetic complexity data to two sets of sunspot number: 1- International Sunspot Number (ISSN) 2- NOAA sunspot number We have been found that the number of more complex structures reach its maximum two years after solar maximum. We also compared the result to our identified geomagnetic storm list. The results showed the more complex ARs are responsible for the strongest geomagnetic storms.

  12. Surface-Active Agents for Isolation of the Core Component of Avian Myeloblastosis Virus 1

    PubMed Central

    Stromberg, Kurt

    1972-01-01

    Sixty-one surface-active agents were evaluated in a procedure designed to assess their ability to remove the envelope from the core component of avian myeloblastosis virus (AMV). The procedure consisted of centrifugation of intact AMV through a series of sucrose gradients each containing an upper layer of agent at one of eight concentrations between 0.01 and 10%. The effectiveness of an agent in producing AMV cores was indicated by (i) the appearance of light-scattering bands in the region of core buoyant density in gradient tubes; (ii) the range of surfactant concentration over which these bands appeared; and (iii) an electron microscopy assessment by the negative-staining technique of the relative proportion of core to non-core material in each of these bands. Six nonionic surfactants were selected by this screening method for comparison in regard to recovery of core protein and endogenous ribonucleic acid (RNA)-dependent deoxyribonucleic acid (DNA) polymerase activity, as well as further morphologic evaluation by electron microscopy. The nonionic surfactants of the polyoxyethylene alcohol class (particularly, Sterox SL) were most effective. Nonionic surfactants of the polyoxyethylene alkylphenol class (particularly, Nonidet P-40) were also effective. Sterox SL and Nonidet P-40 each gave a more than fivefold increase in specific activity of endogenous RNA-dependent DNA polymerase, and each gave a low recovery of core protein. Sterox SL did not interfere to the extent that Nonidet P-40 did in procedures which involved spectrophotometric assay at 260 nm. The use of Sterox SL resulted in the least envelope contamination of core preparations by electron microscopy examination, the most recovery of protein and endogenous RNA-dependent DNA polymerase activity, and a core buoyant density in sucrose of 1.27 g/ml. Images PMID:4112071

  13. Dynamic instabilities and energy conversion processes in hurricane core regions

    NASA Astrophysics Data System (ADS)

    Kwon, Young C.

    A series of numerical simulations of axisymmetric hurricane-like vortices is performed to examine dynamic instabilities and energy conversion processes in a hurricane core area. The numerical experiments in this study consist of simulations of idealized dry vortices and moist vortices. The dry experiment is designed to show that the existence of baroclinic and barotropic instabilities is possible in realistic hurricane-like vortices. In order to generalize the dry simulation results, the simulations are extended to more realistic moist vortices. All numerical experiments are performed using the Pennsylvania State University/National Center for Atmospheric Research Mesoscale Model version 5 (PSU/NCAR MM5) with a 6km horizontal grid. Three steady-state vortices are designed for the dry experiments. A control vortex is built based on the results of a simulation of Hurricane Floyd (1999). Then, two axisymmetric vortices, EXP-1 and EXP-2, are constructed by modifying the wind and mass fields of the control vortex. The EXP-1 vortex is designed to satisfy the necessary condition of baroclinic instability, while the EXP-2 vortex satisfies the necessary condition of barotropic instability. These modified vortices are thought to lie within the natural range of the structural variability of hurricanes. In order to focus on internal effects on the stability of the dry vortices, all external forcings are eliminated. The dry vortices are constructed on an f-plane, and the experiments are performed without moist and boundary layer processes. The stability of the dry vortices is examined by analyzing the behavior of small magnitude of an initial perturbations imposed on the vortices. When a vortex is found to be unstable, the type of instability is determined by the energy source of a growing perturbation. To identify the energy source of the perturbation, a linearized eddy energy equation is derived. The EXP-1 and EXP-2 vortices are found to be unstable with respect to small

  14. Active core rewarming avoids bioelectrical impedance changes in postanesthetic patients

    PubMed Central

    2011-01-01

    Background Postoperative hypothermia is a common cause of complications in patients who underwent laparoscopic cholecystectomy. Hypothermia is known to elicit electrophysiological, biochemical, and cellular alterations thus leading to changes in the active and passive membrane properties. These changes might influence the bioelectrical impedance (BI). Our aim was to determine whether the BI depends on the core temperature. Methods We studied 60 patients (52 female and 8 male) age 40 to 80 years with an ASA I-II classification that had undergone laparoscopic cholecystectomy under balanced inhalation anesthesia. The experimental group (n = 30) received active core rewarming during the transanesthetic and postanesthesic periods. The control group (n = 30) received passive external rewarming. The BI was recorded by using a 4-contact electrode system to collect dual sets of measurements in the deltoid muscle. The body temperature, hemodynamic variables, respiratory rate, blood-gas levels, biochemical parameters, and shivering were also measured. The Mann-Whitney unpaired t-test was used to determine the differences in shivering between each group at each measurement period. Measurements of body temperature, hemodynamics variables, respiratory rate, and BI were analyzed using the two-way repeated-measures ANOVA. Results The gradual decrease in the body temperature was followed by the BI increase over time. The highest BI values (95 ± 11 Ω) appeared when the lowest values of the temperature (35.5 ± 0.5°C) were reached. The active core rewarming kept the body temperature within the physiological range (over 36.5°C). This effect was accompanied by low stable values (68 ± 3 Ω) of BI. A significant decrease over time in the hemodynamic values, respiratory rate, and shivering was seen in the active core-rewarming group when compared with the controls. The temporal course of shivering was different from those of body temperatue and BI. The control patients showed a

  15. Fcgamma receptor-like activity of hepatitis C virus core protein.

    PubMed

    Maillard, Patrick; Lavergne, Jean-Pierre; Sibéril, Sophie; Faure, Grazyna; Roohvand, Farzin; Petres, Stephane; Teillaud, Jean Luc; Budkowska, Agata

    2004-01-23

    We have previously demonstrated that viral particles with the properties of nonenveloped hepatitis C virus (HCV) nucleocapsids occur in the serum of HCV-infected individuals (1). We show here that nucleocapsids purified directly from serum or isolated from HCV virions have FcgammaR-like activity and bind "nonimmune" IgG via its Fcgamma domain. HCV core proteins produced in Escherichia coli and in the baculovirus expression system also bound "nonimmune" IgG and their Fcgamma fragments. Folded conformation was required for IgG binding because the FcgammaR-like site of the core protein was inactive in denaturing conditions. Studies with synthetic core peptides showed that the region spanning amino acids 3-75 was essential for formation of the IgG-binding site. The interaction between the HCV core and human IgG is more efficient in acidic (pH 6.0) than in neutral conditions. The core protein-binding site on the IgG molecule differs from those for C1q, FcgammaRII (CD32), and FcgammaRIII (CD16) but overlaps with that for soluble protein A from Staphylococcus aureus (SpA), which is located in the CH2-CH3 interface of IgG. These characteristics of the core-IgG interaction are very similar to those of the neonatal FcRn. Surface plasmon resonance studies suggested that the binding of an anti-core antibody to HCV core protein might be "bipolar" through its paratope to the corresponding epitope and by its Fcgamma region to the FcgammaR-like motif on this protein. These features of HCV nucleocapsids and HCV core protein may confer an advantage for HCV in terms of survival by interfering with host defense mechanisms mediated by the Fcgamma part of IgG.

  16. X Marks the Spot: Nexus of Filaments, Cores, and Outflows in a Young Star-forming Region

    NASA Astrophysics Data System (ADS)

    Imara, Nia; Lada, Charles; Lewis, John; Bieging, John H.; Kong, Shuo; Lombardi, Marco; Alves, Joao

    2017-05-01

    We present a multiwavelength investigation of a region of a nearby giant molecular cloud that is distinguished by a minimal level of star formation activity. With our new {}12{CO}(J = 2-1) and {}13{CO}(J = 2-1) observations of a remote region within the middle of the California molecular cloud, we aim to investigate the relationship between filaments, cores, and a molecular outflow in a relatively pristine environment. An extinction map of the region from Herschel Space Observatory observations reveals the presence of two 2 pc long filaments radiating from a high-extinction clump. Using the {}13{CO} observations, we show that the filaments have coherent velocity gradients and that their mass-per-unit-lengths may exceed the critical value above which filaments are gravitationally unstable. The region exhibits structure with eight cores, at least one of which is a starless, prestellar core. We identify a low-velocity, low-mass molecular outflow that may be driven by a flat spectrum protostar. The outflow does not appear to be responsible for driving the turbulence in the core with which it is associated, nor does it provide significant support against gravitational collapse.

  17. The Transition from Hot Cores to Ultracompact HII Regions: Results of Centim eter and Millimeter Interferometry

    NASA Astrophysics Data System (ADS)

    Kurtz, S.; Carral, P.; Shepherd, D.; Hofner, P.; Rodriguez, L. F.

    1998-11-01

    We present the results of continuum, molecular line, and radio recombination line studies of massive star-forming regions made with the VLA and OVRO interferometers. We discuss the results in terms of the early development of massive stars, in particular the hot core and ultracompact HII region phases, and the possible transition from one phase to the other.

  18. Real-world daptomycin use across wide geographical regions: results from a pooled analysis of CORE and EU-CORE.

    PubMed

    Seaton, R Andrew; Gonzalez-Ruiz, Armando; Cleveland, Kerry O; Couch, Kimberly A; Pathan, Rashidkhan; Hamed, Kamal

    2016-03-15

    Pooled data from two large registries, Cubicin(®) Outcomes Registry and Experience (CORE; USA) and European Cubicin(®) Outcomes Registry and Experience (EU-CORE; Europe, Latin America, and Asia), were analyzed to determine the characteristics and clinical outcomes of daptomycin therapy in patients with Gram-positive infections across wide geographical regions. Patients receiving at least one dose of daptomycin between 2004 and 2012 for the treatment of Gram-positive infections were included. Clinical success was defined as an outcome of 'cured' or 'improved'. Post-treatment follow-up data were collected for a subset of patients (CORE: osteomyelitis and orthopedic foreign body device infection; EU-CORE: endocarditis, intracardiac/intravascular device infection, osteomyelitis, and orthopedic device infection). Safety was assessed for up to 30 days after daptomycin treatment. In 11,557 patients (CORE, 5482; EU-CORE, 6075) treated with daptomycin (median age, 62 [range, 1-103] years), the most frequent underlying conditions were cardiovascular disease (54.7 %) and diabetes mellitus (28.0 %). The most commonly treated primary infections were complicated skin and soft tissue infection (cSSTI; 31.2 %) and bacteremia (21.8 %). The overall clinical success rate was 77.2 % (uncomplicated SSTI, 88.3 %; cSSTI, 81.0 %; osteomyelitis, 77.7 %; foreign body/prosthetic infection (FBPI), 75.9 %; endocarditis, 75.4 %; and bacteremia, 69.5 %). The clinical success rate was 79.1 % in patients with Staphylococcus aureus infections (MRSA, 78.1 %). An increasing trend of high-dose daptomycin (>6 mg/kg/day) prescribing pattern was observed over time. Clinical success rates were higher with high-dose daptomycin treatment for endocarditis and FBPI. Adverse events (AEs) and serious AEs possibly related to daptomycin therapy were reported in 628 (5.4 %) and 133 (1.2 %) patients, respectively. The real-world data showed that daptomycin was effective and safe in the treatment

  19. Pattern reactivation co-varies with activity in the core recollection network during source memory.

    PubMed

    Leiker, Emily K; Johnson, Jeffrey D

    2015-08-01

    Neuroimaging studies of episodic memory have consistently demonstrated that memory retrieval involves reactivating patterns of neural activity that were present during encoding, and these effects are thought to reflect the qualitative retrieval (recollection) of information that is specific to the content of an episode. By contrast, recollection is also accompanied by other neural correlates that generalize across episodic content and are consequently referred to as the "core recollection network". The neural mechanism by which these specific and core effects interact to give rise to episodic memory retrieval is largely unknown. The current study addressed this issue by testing for correlations (connectivity) between pattern reactivation and activity in the core recollection network. Subjects encoded a series of words with different tasks and then completed a two-step source memory test, whereby they identified the task (source) previously associated with the word and the confidence of that judgment. Multivariate pattern analysis (MVPA) was used in combination with fMRI to first identify encoding-related neural patterns and then test for their reactivation during retrieval. Consistent with prior findings, the magnitude of reactivation increased with source-memory confidence. Moreover, individual-trial measures of reactivation exhibited positive correlations with activity in multiple regions of the core recollection network. Importantly, evidence of functional connectivity between pattern reactivation and a region of left posterior parietal cortex supports the role of this region in tracking the retrieval of episodic information in service of making subjective memory decisions. Copyright © 2015 Elsevier Ltd. All rights reserved.

  20. Regional variation of inner core anisotropy from seismic normal mode observations.

    PubMed

    Deuss, Arwen; Irving, Jessica C E; Woodhouse, John H

    2010-05-21

    Earth's solid inner core is surrounded by a convecting liquid outer core, creating the geodynamo driving the planet's magnetic field. Seismic studies using compressional body waves suggest hemispherical variation in the anisotropic structure of the inner core, but are poorly constrained because of limited earthquake and receiver distribution. Here, using normal mode splitting function measurements from large earthquakes, based on extended cross-coupling theory, we observe both regional variations and eastern versus western hemispherical anisotropy in the inner core. The similarity of this pattern with Earth's magnetic field suggests freezing-in of crystal alignment during solidification or texturing by Maxwell stress as origins of the anisotropy. These observations limit the amount of inner core super rotation, but would be consistent with oscillation.

  1. Body heat transfer during hip surgery using active core warming.

    PubMed

    Kulkarni, P; Webster, J; Carli, F

    1995-07-01

    The purpose of this study was to evaluate the effect of core warming on heat redistribution from the core to the periphery as manifested by changes in core, mean skin temperature and mean body heat, investigated in a group of 30 patients undergoing total hip replacement. The control group (n = 10) had no active warming. Core warming was achieved in the humidifier group (n = 10) by using humidified and warmed gases at 40 degrees C, whilst in the oesophageal group (n = 10), an oesophageal heat exchanger was used to achieve active warming. Operating room temperature and relative humidity was standardised. Aural canal and skin temperatures (15 sites) were measured before induction of anaesthesia, at the end of surgery and one hour of recovery after anaesthesia. Mean skin temperatures were calculated for a weighted four and unweighted 15 points, and mean body heat were calculated to quantify the distribution of body heat. Core temperature decreased in the control and the oesophageal groups, but not in the humidifier group at the end of surgery; by mean values +/- SD of 1.9 degrees C +/- 0.6, 1.2 degrees C +/- 0.6 and 0.4 degree C +/- 0.2 degree C, respectively (P < 0.01). Mean skin temperature (MST15) decreased in the control group by 1.0 degree C +/- 1.0, but not in the actively warmed groups where the mean increased by 0.1 degree C +/- 1.4 and 0.2 degree C +/- 0.2 in the oesophageal and humidifier groups, respectively (P < 0.05).(ABSTRACT TRUNCATED AT 250 WORDS)

  2. Mutations in pre-core and basic core promoter regions of hepatitis B virus in chronic hepatitis B patients

    PubMed Central

    Wang, Xiao-Ling; Ren, Jian-Ping; Wang, Xue-Qing; Wang, Xiao-Hong; Yang, Shao-Fang; Xiong, Yi

    2016-01-01

    AIM: To investigate the frequency of mutations in pre-core (pre-C) and basic core promoter (BCP) regions of hepatitis B virus (HBV) from Shanxi Province, and the association between mutations and disease related indexes. METHODS: One hundred chronic hepatitis B patients treated at Shanxi Province Hospital of Traditional Chinese Medicine were included in this study. PCR-reverse dot blot hybridization and mismatch amplification mutation assay (MAMA)-PCR were used to detect the mutations in the HBV pre-C and BCP regions. HBV DNA content and liver function were compared between patients with mutant HBV pre-C and BCP loci and those with wild-type loci. The consistency between PCR-reverse dot blot hybridization and MAMA-PCR for detecting mutations in the HBV pre-C and BCP regions was assessed. RESULTS: Of the 100 serum samples detected, 9.38% had single mutations in the pre-C region, 29.17% had single mutations in the BCP region, 41.67% had mutations in both BCP and pre-C regions, and 19.79% had wild-type loci. The rates of BCP and pre-C mutations were 65.7% and 34.3%, respectively, in hepatitis B e antigen (HBeAg) positive patients, and 84.6% and 96.2%, respectively, in HBeAg negative patients. The rate of pre-C mutations was significantly higher in HBeAg negative patients than in HBeAg positive patients (χ2 = 26.62, P = 0.00), but there was no significant difference in the distribution of mutations in the BCP region between HBeAg positive and negative patients (χ2 = 2.43, P = 0.12). The presence of mutations in the pre-C (Wilcoxon W = 1802.5, P = 0.00) and BCP regions (Wilcoxon W = 2906.5, P = 0.00) was more common in patients with low HBV DNA content. Both AST and GGT were significantly higher in patients with mutant pre-C and BCP loci than in those with wild-type loci (P < 0.05). PCR-reverse dot blot hybridization and MAMA-PCR for detection of mutations in the BCP and pre-C regions had good consistency, and the Kappa values obtained were 0.91 and 0.58, respectively

  3. Kinked Loop Stretching Between Two Active Regions

    NASA Image and Video Library

    2017-07-25

    Numerous arches of magnetic field lines danced and swayed above a large active region over about a 30-hour period (July 17-18, 2017). We can also see the magnetic field lines from the large active region reached out and connected with a smaller active region. Those linked lines then strengthened (become brighter), but soon began to develop a kink in them and rather swiftly faded from view. All of this activity is driven by strong magnetic forces associated with the active regions. The images were taken in a wavelength of extreme ultraviolet light. https://photojournal.jpl.nasa.gov/catalog/PIA21838

  4. Ultraviolet events observed in active regions. I - Observations and scenario

    NASA Technical Reports Server (NTRS)

    Fontenla, Juan M.; Filipowski, Sharon; Tandberg-Hanssen, Einar; Reichmann, Edwin J.

    1989-01-01

    UV line data obtained in solar active regions on and near the limb, taken with the Ultraviolet Spectrometer and Polarimeter experiment on the Solar Maximum Mission are examined. The study provides insight into the physical processes behind sudden localized brightenings (or microflares) that occur within these active regions and their relation to surging activity. Time sequences of rasters and rasters through the line (taken in Ly-alpha and N V lines simultaneously) and C IV dopplergrams are the core of these data. They show the brightening events on the disk and Doppler shifts in dynamic events on the disk and above the limb. The study suggests, for the events, a localized energy deposition in a region of the chromosphere that heats the material and produces a pressure pulse. This mechanism explains the brightenings in transition region lines and also the observed surging behavior and jet-like events.

  5. Core formation by giant impacts: Conditions for intact melt region formation

    NASA Technical Reports Server (NTRS)

    Tonks, W. B.; Melosh, H. J.

    1993-01-01

    Among the many effects of high-speed, giant impacts is widescale melting that can potentially trigger catastrophic core formation. If the projectile is sufficiently large, the melt pools to form an intact melt region. The dense phase then segregates from the melt, forming a density anomoly at the melt region's base. If the anomoly produces a differential stress larger than a certain minimum, it overcomes the mantle's long-term elastic strength and rapidly forms a core. It was previously shown that giant impacts effectively trigger core formation in silicate bodies by the time they grow to the mass of Mercury and in icy bodies by the time they grow larger than Triton. In order for this process to be viable, an intact melt region must be formed. Conditions under which this occurs is examined in more detail than previously published.

  6. Robustness of nuclear core activity reconstruction by data assimilation

    NASA Astrophysics Data System (ADS)

    Bouriquet, Bertrand; Argaud, Jean-Philippe; Erhard, Patrick; Massart, Sébastien; Ponçot, Angélique; Ricci, Sophie; Thual, Olivier

    2011-02-01

    We apply a data assimilation technique, inspired from meteorological applications, to perform an optimal reconstruction of the neutronic activity field in a nuclear core. Both measurements and information coming from a numerical model are used. We first study the robustness of the method when the amount of measured information decreases. We then study the influence of the nature of the instruments and their spatial repartition on the efficiency of the field reconstruction.

  7. Extending fullwave core ICRF simulation to SOL and antenna regions using FEM solver

    NASA Astrophysics Data System (ADS)

    Shiraiwa, S.; Wright, J. C.

    2016-10-01

    A full wave simulation approach to solve a driven RF waves problem including hot core, SOL plasmas and possibly antenna is presented. This approach allows for exploiting advantages of two different way of representing wave field, namely treating spatially dispersive hot conductivity in a spectral solver and handling complicated geometry in SOL/antenna region using an unstructured mesh. Here, we compute a mode set in each region with the RF electric field excitation on the connecting boundary between core and edge regions. A mode corresponding to antenna excitation is also computed. By requiring the continuity of tangential RF electric and magnetic fields, the solution is obtained as unique superposition of these modes. In this work, TORIC core spectral solver is modified to allow for mode excitation, and the edge region of diverted Alcator C-Mod plasma is modeled using COMSOL FEM package. The reconstructed RF field is similar in the core region to TORIC stand-alone simulation. However, it contains higher poloidal modes near the edge and captures a wave bounced and propagating in the poloidal direction near the vacuum-plasma boundary. These features could play an important role when the single power pass absorption is modest. This new capability will enable antenna coupling calculations with a realistic load plasma, including collisional damping in realistic SOL plasma and other loss mechanisms such as RF sheath rectification. USDoE Awards DE-FC02-99ER54512, DE-FC02-01ER54648.

  8. Mantle compensation of active metamorphic core complexes at Woodlark rift in Papua New Guinea.

    PubMed

    Abers, Geoffrey A; Ferris, Aaron; Craig, Mitchell; Davies, Hugh; Lerner-Lam, Arthur L; Mutter, John C; Taylor, Brian

    2002-08-22

    In many highly extended rifts on the Earth, tectonic removal of the upper crust exhumes mid-crustal rocks, producing metamorphic core complexes. These structures allow the upper continental crust to accommodate tens of kilometres of extension, but it is not clear how the lower crust and underlying mantle respond. Also, despite removal of the upper crust, such core complexes remain both topographically high and in isostatic equilibrium. Because many core complexes in the western United States are underlain by a flat Moho discontinuity, it has been widely assumed that their elevation is supported by flow in the lower crust or by magmatic underplating. These processes should decouple upper-crust extension from that in the mantle. In contrast, here we present seismic observations of metamorphic core complexes of the western Woodlark rift that show the overall crust to be thinned beneath regions of greatest surface extension. These core complexes are actively being exhumed at a rate of 5-10 km Myr(-1), and the thinning of the underlying crust appears to be compensated by mantle rocks of anomalously low density, as indicated by low seismic velocities. We conclude that, at least in this case, the development of metamorphic core complexes and the accommodation of high extension is not purely a crustal phenomenon, but must involve mantle extension.

  9. The Main Sequence of Explosive Solar Active Regions: Comparison of Emerging and Mature Active Regions

    NASA Technical Reports Server (NTRS)

    Falconer, David; Moore, Ron

    2011-01-01

    For mature active regions, an active region s magnetic flux content determines the maximum free energy the active region can have. Most Large flares and CMEs occur in active regions that are near their free-energy limit. Active-region flare power radiated in the GOES 1-8 band increases steeply as the free-energy limit is approached. We infer that the free-energy limit is set by the rate of release of an active region s free magnetic energy by flares, CMEs and coronal heating balancing the maximum rate the Sun can put free energy into the active region s magnetic field. This balance of maximum power results in explosive active regions residing in a "mainsequence" in active-region (flux content, free energy content) phase space, which sequence is analogous to the main sequence of hydrogen-burning stars in (mass, luminosity) phase space.

  10. The Twist Limit for Bipolar Active Regions

    NASA Technical Reports Server (NTRS)

    Moore, Ron; Falconer, David; Gary, Allen

    2008-01-01

    We present new evidence that further supports the standard idea that active regions are emerged magnetic-flux-rope omega loops. When the axial magnetic twist of a cylindrical flux rope exceeds a critical amount, the flux rope becomes unstable to kinking, and the excess axial twist is converted into writhe twist by the kinking. This suggests that, if active regions are emerged omega loops, then (1) no active region should have magnetic twist much above the limit set by kinking, (2) active regions having twist near the limit should often arise from kinked omega loops, and (3) since active regions having large delta sunspots are outstandingly twisted, these arise from kinked omega loops and should have twist near the limit for kinking. From each of 36 vector magnetograms of bipolar active regions, we have measured (1) the total flux of the vertical field above 100 G, (2) the area covered by this flux, and (3) the net electric current that arches over the polarity inversion line. These three quantities yield an estimate of the axial magnetic twist in a simple model cylindrical flux rope that corresponds to the top of the active region s hypothetical omega loop prior to emergence. In all 36 cases, the estimated twist is below the critical limit for kinking. The 11 most twisted active regions (1) have estimated twist within a factor of approx.3 of the limit, and (2) include all of our 6 active regions having large delta sunspots. Thus, our observed twist limit for bipolar active regions is in good accord with active regions being emerged omega loops.

  11. The Twist Limit for Bipolar Active Regions

    NASA Technical Reports Server (NTRS)

    Moore, Ron; Falconer, David; Gary, Allen

    2008-01-01

    We present new evidence that further supports the standard idea that active regions are emerged magnetic-flux-rope omega loops. When the axial magnetic twist of a cylindrical flux rope exceeds a critical amount, the flux rope becomes unstable to kinking, and the excess axial twist is converted into writhe twist by the kinking. This suggests that, if active regions are emerged omega loops, then (1) no active region should have magnetic twist much above the limit set by kinking, (2) active regions having twist near the limit should often arise from kinked omega loops, and (3) since active regions having large delta sunspots are outstandingly twisted, these arise from kinked omega loops and should have twist near the limit for kinking. From each of 36 vector magnetograms of bipolar active regions, we have measured (1) the total flux of the vertical field above 100 G, (2) the area covered by this flux, and (3) the net electric current that arches over the polarity inversion line. These three quantities yield an estimate of the axial magnetic twist in a simple model cylindrical flux rope that corresponds to the top of the active region s hypothetical omega loop prior to emergence. In all 36 cases, the estimated twist is below the critical limit for kinking. The 11 most twisted active regions (1) have estimated twist within a factor of approx.3 of the limit, and (2) include all of our 6 active regions having large delta sunspots. Thus, our observed twist limit for bipolar active regions is in good accord with active regions being emerged omega loops.

  12. Core muscle activation during Swiss ball and traditional abdominal exercises.

    PubMed

    Escamilla, Rafael F; Lewis, Clare; Bell, Duncan; Bramblet, Gwen; Daffron, Jason; Lambert, Steve; Pecson, Amanda; Imamura, Rodney; Paulos, Lonnie; Andrews, James R

    2010-05-01

    Controlled laboratory study using a repeated-measures, counterbalanced design. To test the ability of 8 Swiss ball exercises (roll-out, pike, knee-up, skier, hip extension right, hip extension left, decline push-up, and sitting march right) and 2 traditional abdominal exercises (crunch and bent-knee sit-up) on activating core (lumbopelvic hip complex) musculature. Numerous Swiss ball abdominal exercises are employed for core muscle strengthening during training and rehabilitation, but there are minimal data to substantiate the ability of these exercises to recruit core muscles. It is also unknown how core muscle recruitment in many of these Swiss ball exercises compares to core muscle recruitment in traditional abdominal exercises such as the crunch and bent-knee sit-up. A convenience sample of 18 subjects performed 5 repetitions for each exercise. Electromyographic (EMG) data were recorded on the right side for upper and lower rectus abdominis, external and internal oblique, latissimus dorsi, lumbar paraspinals, and rectus femoris, and then normalized using maximum voluntary isometric contractions (MVICs). EMG signals during the roll-out and pike exercises for the upper rectus abdominis (63% and 46% MVIC, respectively), lower rectus abdominis (53% and 55% MVIC, respectively), external oblique (46% and 84% MVIC, respectively), and internal oblique (46% and 56% MVIC, respectively) were significantly greater compared to most other exercises, where EMG signals ranged between 7% to 53% MVIC for the upper rectus abdominis, 7% to 44% MVIC for the lower rectus abdominis, 14% to 73% MVIC for the external oblique, and 16% to 47% MVIC for the internal oblique. The lowest EMG signals were consistently found in the sitting march right exercise. Latissimus dorsi EMG signals were greatest in the pike, knee-up, skier, hip extension right and left, and decline push-up (17%-25% MVIC), and least with the sitting march right, crunch, and bent-knee sit-up exercises (7%-8% MVIC

  13. Variations in the core promoter/pre-core region in HBV genotype C in Japanese and Northern Vietnamese patients.

    PubMed

    Truong, Bui Xuan; Yano, Yoshihiko; Seo, Yasushi; Phuong, Tran Minh; Tanaka, Yasuhito; Kato, Hirotaka; Miki, Akira; Utsumi, Takako; Azuma, Takeshi; Trach, Nguyen Khanh; Mizokami, Masashi; Hayashi, Yoshitake; Kasuga, Masato

    2007-09-01

    Hepatitis B virus (HBV) subgenotypes Cs (C1) and Ce (C2) are common in East Asia. To investigate the genomic difference of HBV genotype C between two separated regions, 50 subgenotype Cs-infected Vietnamese and 70 subgenotype Ce-infected Japanese patients were enrolled for analysis. The patients were categorized to either a hepatocellular carcinoma group (HCC) or a non-HCC group including liver cirrhosis, chronic hepatitis, and asymptomatic carriers. HBV serology, HBV-DNA level, and variations in core promoter/pre-core region were examined. Phylogenetic analysis based on the full genome sequences and nucleotide sequences partly in the S gene and in the P gene revealed that all Japanese strains (70/70) were subgenotype Ce, and nearly all of the Vietnamese strains (50/51) were subgenotype Cs, excluding one subgenotype C5. C1858 and G1775 were common in the Vietnamese (64% and 40%) but not in the Japanese (0%). The prevalence of C/A1753 in Vietnamese was higher than that in the Japanese (32% vs. 17.1%), however the frequency of A1896 in the Japanese was significantly higher (32.9% vs. 12%, P < 0.05). Most of the Vietnamese patients with HCC had a high level of HBV-DNA, the Japanese HCC had a relatively low level. In the Vietnamese, C/A1753 and C1858 were associated closely with T1762A1764, higher HBV-DNA levels and higher HCC incidence. The multivariate analysis revealed that male, T1653 and C/A1753 were independent risk factors for HCC. The subgenotypes and unique mutations of HBV genotype C in the Vietnamese and Japanese differed, and C/A1753 and C1858 variants might play a role in the pathogenesis of liver disease in Vietnamese patients.

  14. Quasi-geostrophic models of core dynamics in the equatorial region

    NASA Astrophysics Data System (ADS)

    Jault, D.; Schaeffer, N.

    2016-12-01

    Previous quasi-geostrophic models of core dynamics relied on the hypothesis that the height of the core-mantle boundary above the equatorial plane does not vary rapidly with the distance to the rotation axis. Using a weak formalism, we have recently derived a quasi-geostrophic (QG) model that is not limited by this hypothesis and is even valid in the equatorial region (Labbé & al., 2015). It can be extended to apply when the core-mantle boundary is non-spherical. Initially, the model also included an evolution equation for the magnetic field under the restrictive hypothesis that the mantle can be considered as a perfect conductor. In this respect, it sets the study of torsional Alfvén waves that carry the core angular momentum in a general framework. We shall now apply the model to the related questions of the electromagnetic and topographic core-mantle coupling and of the evolution of MHD waves in the equatorial region. In order to validate the model with a finite electrical conductivity of the mantle, we compare numerical solutions of the reduced QG model and of the primitive 3D equations.

  15. Global/Regional Integrated Model System (GRIMs): Double Fourier Series (DFS) Dynamical Core

    NASA Astrophysics Data System (ADS)

    Koo, M.; Hong, S.

    2013-12-01

    A multi-scale atmospheric/oceanic model system with unified physics, the Global/Regional Integrated Model system (GRIMs) has been created for use in numerical weather prediction, seasonal simulations, and climate research projects, from global to regional scales. It includes not only the model code, but also the test cases and scripts. The model system is developed and practiced by taking advantage of both operational and research applications. We outlines the history of GRIMs, its current applications, and plans for future development, providing a summary useful to present and future users. In addition to the traditional spherical harmonics (SPH) dynamical core, a new spectral method with a double Fourier series (DFS) is available in the GRIMs (Table 1). The new DFS dynamical core with full physics is evaluated against the SPH dynamical core in terms of short-range forecast capability for a heavy rainfall event and seasonal simulation framework. Comparison of the two dynamical cores demonstrates that the new DFS dynamical core exhibits performance comparable to the SPH in terms of simulated climatology accuracy and the forecast of a heavy rainfall event. Most importantly, the DFS algorithm guarantees improved computational efficiency in the cluster computer as the model resolution increases, which is consistent with theoretical values computed from the dry primitive equation model framework of Cheong (Fig. 1). The current study shows that, at higher resolutions, the DFS approach can be a competitive dynamical core because the DFS algorithm provides the advantages of both the spectral method for high numerical accuracy and the grid-point method for high performance computing in the aspect of computational cost. GRIMs dynamical cores

  16. On Heating the Sun's Corona by Magnetic Explosions: Feasibility in Active Regions and prospects for Quiet Regions and Coronal Holes

    NASA Technical Reports Server (NTRS)

    Moore, Ronald L.; Falconer, D. A.; Porter, Jason G.; Suess, Steven T.

    1999-01-01

    We build a case for the persistent strong coronal heating in active regions and the pervasive quasi-steady heating of the corona in quiet regions and coronal holes being driven in basically the same way as the intense transient heating in solar flares: by explosions of sheared magnetic fields in the cores of initially closed bipoles. We begin by summarizing the observational case for exploding sheared core fields being the drivers of a wide variety of flare events, with and without coronal mass ejections. We conclude that the arrangement of an event's flare heating, whether there is a coronal mass ejection, and the time and place of the ejection relative to the flare heating are all largely determined by four elements of the form and action of the magnetic field: (1) the arrangement of the impacted, interacting bipoles participating in the event, (2) which of these bipoles are active (have sheared core fields that explode) and which are passive (are heated by injection from impacted active bipoles), (3) which core field explodes first, and (4) which core-field explosions are confined within the closed field of their bipoles and which ejectively open their bipoles. We then apply this magnetic-configuration framework for flare heating to the strong coronal heating observed by the Yohkoh Soft X-ray Telescope in an active region with strongly sheared core fields observed by the MSFC vector magnetograph. All of the strong coronal heating is in continually microflaring sheared core fields or in extended loops rooted against the active core fields. Thus, the strong heating occurs in field configurations consistent with the heating being driven by frequent core-field explosions that are smaller but similar to those in confined flares and flaring arches. From analysis of the thermal and magnetic energetics of two selected core-field microflares and a bright extended loop, we find that (1) it is energetically feasible for the sheared core fields to drive all of the coronal

  17. Sites of origin and developmental dynamics of the neurons in the core and shell regions of torus semicircularis in the Chinese softshell turtle (Pelodiscus sinensis).

    PubMed

    Xi, Chao; Chen, Qiong; Zeng, Shao-Ju; Lin, Yu-Tao; Huang, Yu-Fang; Liu, Yu; Zhang, Xin-Wen; Zuo, Ming-Xue

    2011-09-01

    To know the embryogenesis of the core and shell regions of the midbrain auditory nucleus, a single dose of [(3)H]-thymidine was injected into the turtle embryos at peak stages of neurogenesis in the shell and core of the torus semicircularis. Following sequential survival times, labeled neurons and the dynamics of cell proliferation were examined. The expression of vimentin (VM), reelin, calbindin, parvalbumin, and substance P were also studied. The results showed that: 1) progenitor cells for the core and shell regions were generated in different sites of the ventricular zone; 2) the length of the cell cycle or S-phase for the shell region were both longer than those for the core region (4.7 and 3.2 hours longer, respectively), suggesting that mitotic activity in the core region is higher than it is in the shell region; 3) the elongated cell bodies of the labeled core and shell cells had close apposition to VM fibers, suggesting that the migration of these cells is guided by VM fibers; 4) the germinal sites of the core and shell constructed by projecting the orientation of radial VM fibers back to the ventricular zone was consistent with those obtained by short and sequential survival [(3)H]-thymidine radiography; and 5) the beginning of positive staining for parvalbumin in the core region was interposed between those for calbindin and substance P in the shell regions. This study contributes to the understanding of how auditory nuclei are organized and how their components developed and evolved. Copyright © 2011 Wiley-Liss, Inc.

  18. Depth of origin of solar active regions

    NASA Technical Reports Server (NTRS)

    Parker, E. N.

    1984-01-01

    Observations show that the individual bipolar magnetic regions on the sun remain confined during their decay phase, with much of the magnetic field pulling back under the surface, in reverse of the earlier emergence. This suggests that the magnetic field is held on a short rein by subsurface forces, for otherwise the region would decay entirely by dispersing across the face of the sun. With the simple assumption that the fields at the surface are controlled from well-defined anchor points at a depth h, it is possible to relate the length l of the bipolar region at the surface to the depth h, with h about equal to l. The observed dimensions l about equal to 100,000 km for normal active regions, and l about equal to 10,000 km for the ephemeral active regions, indicate comparable depths of origin. More detailed observational studies of the active regions may be expected to shed further light on the problem.

  19. Human and climate impacts on Holocene fire activity recorded in polar and mountain ice cores

    NASA Astrophysics Data System (ADS)

    Kehrwald, Natalie; Zennaro, Piero; Kirchgeorg, Torben; Li, Quanlian; Wang, Ninglian; Power, Mitchell; Zangrando, Roberta; Gabrielli, Paolo; Thompson, Lonnie; Gambaro, Andrea; Barbante, Carlo

    2014-05-01

    Fire is one of the major influences of biogeochemical change on local to hemispheric scales through emitting greenhouse gases, altering atmospheric chemistry, and changing primary productivity. Levoglucosan (1,6-anhydro-β-D-glucopyranose) is a specific molecular that can only be produced by cellulose burning at temperatures > 300°C, comprises a major component of smoke plumes, and can be transported across > 1000 km distances. Levoglucosan is deposited on and archived in glaciers over glacial interglacial cycles resulting in pyrochemical evidence for exploring interactions between fire, climate and human activity. Ice core records provide records of past biomass burning from regions of the world with limited paleofire data including polar and low-latitude, high-altitude regions. Here, we present Holocene fire activity records from the NEEM, Greenland (77° 27'N; 51° 3'W; 2454 masl), EPICA Dome C, Antarctica (75° 06'S; 123° 21'E; 3233 masl), Kilimanjaro, Tanzania (3° 05'S, 21.2° E, 5893 masl) and the Muztagh, China (87.17° E; 36.35° N; 5780 masl ice cores. The NEEM ice core reflects boreal fire activity from both North American and Eurasian sources. Temperature is the dominant control of NEEM levoglucosan flux over decadal to millennial time scales, while droughts influence fire activity over sub-decadal timescales. Our results demonstrate the prominence of Siberian fire sources during intense multiannual droughts. Unlike the NEEM core, which incorporates the largest land masses in the world as potential fire sources, EPICA Dome C is located far from any possible fire source. However, EPICA Dome C levoglucosan concentrations are consistently above detection limits and demonstrate a substantial 1000-fold increase in fire activity beginning approximately 800 years ago. This significant and sustained increase coincides with Maori arrival and dispersal in New Zealand augmented by later European arrival in Australia. The EPICA Dome C levoglucosan profile is

  20. (129)I record of nuclear activities in marine sediment core from Jiaozhou Bay in China.

    PubMed

    Fan, Yukun; Hou, Xiaolin; Zhou, Weijian; Liu, Guangshan

    2016-04-01

    Iodine-129 has been used as a powerful tool for environmental tracing of human nuclear activities. In this work, a sediment core collected from Jiaozhou Bay, the east coast of China, in 2002 was analyzed for (129)I to investigate the influence of human nuclear activities in this region. Significantly enhanced (129)I level was observed in upper 70 cm of the sediment core, with peak values in the layer corresponding to 1957, 1964, 1974, 1986, and after 1990. The sources of (129)I and corresponding transport processes in this region are discussed, including nuclear weapons testing at the Pacific Proving Grounds, global fallout from a large numbers of nuclear weapon tests in 1963, the climax of Chinese nuclear weapons testing in the early 1970s, the Chernobyl accident in 1986, and long-distance dispersion of European reprocessing derived (129)I. The very well (129)I records of different human nuclear activities in the sediment core illustrate the potential application of (129)I in constraining ages and sedimentation rates of the recent sediment. The releases of (129)I from the European nuclear fuel reprocessing plants at La Hague (France) and Sellafield (UK) were found to dominate the inventory of (129)I in the Chinese sediments after 1990, not only the directly atmospheric releases of these reprocessing plants, but also re-emission of marine discharged (129)I of these reprocessing plants in the highly contaminated European seas.

  1. Therapeutic activity of modified U1 core spliceosomal particles.

    PubMed

    Rogalska, Malgorzata Ewa; Tajnik, Mojca; Licastro, Danilo; Bussani, Erica; Camparini, Luca; Mattioli, Chiara; Pagani, Franco

    2016-04-04

    Modified U1 snRNAs bound to intronic sequences downstream of the 5' splice site correct exon skipping caused by different types of mutations. Here we evaluate the therapeutic activity and structural requirements of these exon-specific U1 snRNA (ExSpeU1) particles. In a severe spinal muscular atrophy, mouse model, ExSpeU1, introduced by germline transgenesis, increases SMN2 exon 7 inclusion, SMN protein production and extends life span. In vitro, RNA mutant analysis and silencing experiments show that while U1A protein is dispensable, the 70K and stem loop IV elements mediate most of the splicing rescue activity through improvement of exon and intron definition. Our findings indicate that precise engineering of the U1 core spliceosomal RNA particle has therapeutic potential in pathologies associated with exon-skipping mutations.

  2. Therapeutic activity of modified U1 core spliceosomal particles

    PubMed Central

    Rogalska, Malgorzata Ewa; Tajnik, Mojca; Licastro, Danilo; Bussani, Erica; Camparini, Luca; Mattioli, Chiara; Pagani, Franco

    2016-01-01

    Modified U1 snRNAs bound to intronic sequences downstream of the 5′ splice site correct exon skipping caused by different types of mutations. Here we evaluate the therapeutic activity and structural requirements of these exon-specific U1 snRNA (ExSpeU1) particles. In a severe spinal muscular atrophy, mouse model, ExSpeU1, introduced by germline transgenesis, increases SMN2 exon 7 inclusion, SMN protein production and extends life span. In vitro, RNA mutant analysis and silencing experiments show that while U1A protein is dispensable, the 70K and stem loop IV elements mediate most of the splicing rescue activity through improvement of exon and intron definition. Our findings indicate that precise engineering of the U1 core spliceosomal RNA particle has therapeutic potential in pathologies associated with exon-skipping mutations. PMID:27041075

  3. Suppression of Active-Region CME Production by the Presence of Other Active Regions

    NASA Technical Reports Server (NTRS)

    Falconer, David; Moore, Ron; Barghouty, Abdulnasser; Khazanov, Igor

    2009-01-01

    From the SOHO mission s data base of MDI full-disk magnetograms spanning solar cycle 23, we have obtained a set of 40,000 magnetograms of 1,300 active regions, tracking each active region across the 30 degree central solar disk. Each active region magnetogram is cropped from the full-disk magnetogram by an automated code. The cadence is 96 minutes. From each active-region magnetogram, we have measured two whole-active-region magnetic quantities: (1) the magnetic size of the active region (the active region s total magnetic flux), and (2) a gauge of the active region s free magnetic energy (part of the free energy is released in the production of a flare and/or CME eruption). From NOAA Flare/CME catalogs, we have obtained the event (Flare/CME/SEP event) production history of each active region. Using all these data, we find that for each type of eruptive event, an active region s expected rate of event production increases as a power law of our gauge of active-region free magnetic energy. We have also found that, among active regions having nearly the same free energy, the rate of the CME production is less when there are many other active regions on the disk than when there are few or none, but there is no significant discernible suppression of the rate of flare production. This indicates that the presence of other active regions somehow tends to inhibit an active region s flare-producing magnetic explosions from becoming CMEs, contrary to the expectation from the breakout model for the production of CMEs.

  4. Active Region Emergence and Remote Flares

    NASA Astrophysics Data System (ADS)

    Fu, Yixing; Welsch, Brian T.

    2016-02-01

    We study the effect of new emerging solar active regions on the large-scale magnetic environment of existing regions. We first present a theoretical approach to quantify the "interaction energy" between new and pre-existing regions as the difference between i) the summed magnetic energies of their individual potential fields and ii) the energy of their superposed potential fields. We expect that this interaction energy can, depending upon the relative arrangements of newly emerged and pre-existing magnetic flux, indicate the existence of "topological" free magnetic energy in the global coronal field that is independent of any "internal" free magnetic energy due to coronal electric currents flowing within the newly emerged and pre-existing flux systems. We then examine the interaction energy in two well-studied cases of flux emergence, but find that the predicted energetic perturbation is relatively small compared to energies released in large solar flares. Next, we present an observational study of the influence of the emergence of new active regions on flare statistics in pre-existing active regions, using NOAA's Solar Region Summary and GOES flare databases. As part of an effort to precisely determine the emergence time of active regions in a large event sample, we find that emergence in about half of these regions exhibits a two-stage behavior, with an initial gradual phase followed by a more rapid phase. Regarding flaring, we find that the emergence of new regions is associated with a significant increase in the occurrence rate of X- and M-class flares in pre-existing regions. This effect tends to be more significant when pre-existing and new emerging active regions are closer. Given the relative weakness of the interaction energy, this effect suggests that perturbations in the large-scale magnetic field, such as topology changes invoked in the "breakout" model of coronal mass ejections, might play a significant role in the occurrence of some flares.

  5. Active region moss. Basic physical parameters and their temporal variation

    NASA Astrophysics Data System (ADS)

    Tripathi, D.; Mason, H. E.; Del Zanna, G.; Young, P. R.

    2010-07-01

    Context. Active region moss are transition region phenomena, first noted in the images recorded by the Transition Region and Coronal Explorer (TRACE) in λ171. Moss regions are thought to be the footpoints of hot loops (3-5 MK) seen in the core of active regions. These hot loops appear “fuzzy” (unresolved). Therefore, it is difficult to study the physical plasma parameters in individual hot core loops and hence their heating mechanisms. Moss regions provide an excellent opportunity to study the physics of hot loops. In addition, they allow us to study the transition region dynamics in the footpoint regions. Aims: To derive the physical plasma parameters such as temperature, electron density, and filling factors in moss regions and to study their variation over a short (an hour) and a long time period (5 consecutive days). Methods: Primarily, we have analyzed spectroscopic observations recorded by the Extreme-ultraviolet Imaging Spectrometer (EIS) aboard Hinode. In addition we have used supplementary observations taken from TRACE and the X-Ray Telescope (XRT) aboard Hinode. Results: The moss emission is strongest in the Fe XII and Fe XIII lines. Based on analyses using line ratios and emission measure we found that moss regions have a characteristic temperature of log T[K] = 6.2. The temperature structure in moss region remains almost identical from one region to another and it does not change with time. The electron densities measured at different locations in the moss regions using Fe XII ratios are about 1-3 × 1010 cm-3 and about 2-4 × 109 cm-3 using Fe XIII and Fe XIV. The densities in the moss regions are similar in different places and show very little variation over short and long time scales. The derived electron density substantially increased (by a factor of about 3-4 or even more in some cases) when a background subtraction was performed. The filling factor of the moss plasma can vary between 0.1-1 and the path length along which the emission

  6. Triggering jet-driven explosions of core-collapse supernovae by accretion from convective regions

    NASA Astrophysics Data System (ADS)

    Gilkis, Avishai; Soker, Noam

    2014-04-01

    We find that convective regions of collapsing massive stellar cores possess sufficient stochastic angular momentum to form intermittent accretion discs around the newly born neutron star (NS) or black hole (BH), as required by the jittering-jets model for core-collapse supernova explosions. To reach this conclusion, we derive an approximate expression for stochastic specific angular momentum in convection layers of stars, and using the mixing-length theory apply it to four stellar models at core-collapse epoch. In all models, evolved using the stellar evolution code MESA, the convective helium layer has sufficient angular momentum to form an accretion disc. The mass available for disc formation around the NS or BH is 0.1-1.2 M⊙; stochastic accretion of this mass can form intermittent accretion discs that launch jets, powerful enough to explode the star according to the jittering-jets model. Our results imply that even if no explosion occurs after accretion of the inner ˜2-5 M⊙ of the core on to the NS or BH (the mass depends on the stellar model), accretion of outer layers of the core will eventually lead to an energetic supernova explosion.

  7. Hinode Captures Images of Solar Active Region

    NASA Image and Video Library

    In these images, Hinode's Solar Optical Telescope (SOT) zoomed in on AR 11263 on August 4, 2011, five days before the active region produced the largest flare of this cycle, an X6.9. We show images...

  8. Flare Size Distributions and Active Region Types

    NASA Astrophysics Data System (ADS)

    Bai, Taeil

    2007-05-01

    Size distributions of solar flares measured by various size indicators follow a power law with a negative index of about 1.8. On the basis of general appearance of power-law distributions, Lu and his collegues proposed an avalenche model. According to this model, the power-law index should be independent of active region size, but the cutoff size above which the size distribution steepens rapidly is expected to depend on the active region size. I have analyzed the size distribution of flares, using GOES soft X-ray observations for 2004 and 2005. For flares observed by GOES during these years, their locations are almost completely identified even for C-class flares. This enable us to study the dependence of size distribution on active region type. Comparing the power-law portion of size distributions below the high-end cutoff, I have found that the size distribution index depends on active region type. Flares from prolific active regions exhibit a flatter distribution, while flares from non-prolific active regions exhibit a steeper distribution. I plan to discuss a plausible mechanism for such behavior.

  9. Mutagenesis of tGCN5 core region reveals two critical surface residues F90 and R140

    SciTech Connect

    Mehta, Kinjal Rajesh; Chan, Yan M.; Lee, Man X.; Yang, Ching Yao; Voloshchuk, Natalya; Montclare, Jin Kim

    2010-09-24

    Research highlights: {yields} Mutagenesis of the tGCN5 core region reveals two residues important for function. {yields} Developed a fluorescent lysate-based activity assay to assess mutants. {yields} Surface-exposed residues F90 and R140 of tGCN5 are critical for H3 acetylation. -- Abstract: Tetrahymena General Control Non-Derepressor 5 (tGCN5) is a critical regulator of gene transcription via acetylation of histones. Since the acetylation ability has been attributed to the 'core region', we perform mutagenesis of residues within the tGCN5 'core region' in order to identify those critical for function and stability. Residues that do not participate in catalysis are identified, mutated and characterized for activity, structure and thermodynamic stability. Variants I107V, Q114L, A121T and A130S maintain the acetylation function relative to wild-type tGCN5, while variants F90Y, F112R and R140H completely abolish function. Of the three non-functional variants, since F112 is mutated into a non-homologous charged residue, a loss in function is expected. However, the remaining two variants are mutated into homologous residues, suggesting that F90 and R140 are critical for the activity of tGCN5. While mutation to homologous residue maintains acetylation of histone H3 for the majority of the variants, the two surface-exposed residues, F90 and R140, appear to be essential for tGCN5 function, structure or stability.

  10. Glycosyltransferases involved in the biosynthesis of the inner core region of different lipopolysaccharides.

    PubMed

    Gronow, Sabine; Xia, Guoqing; Brade, Helmut

    2010-01-01

    The inner core of lipopolysaccharide (LPS) structures in Gram-negative bacteria is considered a highly conserved region. The sugar connecting the membrane-associated lipid A moiety with the hydrophilic saccharide moiety, 3-deoxy-alpha-d-manno-oct-2-ulosonic acid (Kdo) is present in every LPS molecule investigated but it may be partially replaced by d-glycero-alpha-d-talo-oct-2-ulosonic acid (Ko). l-Glycero-alpha-d-manno-heptose (Hep) and phosphate residues are part of most but not all LPS structures and additionally, modifications with 4-amino-4-deoxy-beta-l-arabinose (Ara4N) residues occur in some. A number of different glycosyltransferases is involved in the biosynthesis of the inner core region of different lipopolysaccharides. Here, we report the characterization of Kdo transferases, heptosyltransferases and Ara4N transferases from a variety of bacteria. Copyright (c) 2009 Elsevier GmbH. All rights reserved.

  11. Active Region Moss: Doppler Shifts from Hinode/EIS Observations

    NASA Technical Reports Server (NTRS)

    Tripathi, Durgesh; Mason, Helen E.; Klimchuk, James A.

    2012-01-01

    Studying the Doppler shifts and the temperature dependence of Doppler shifts in moss regions can help us understand the heating processes in the core of the active regions. In this paper we have used an active region observation recorded by the Extreme-ultraviolet Imaging Spectrometer (EIS) onboard Hinode on 12-Dec- 2007 to measure the Doppler shifts in the moss regions. We have distinguished the moss regions from the rest of the active region by defining a low density cut-off as derived by Tripathi et al. (2010). We have carried out a very careful analysis of the EIS wavelength calibration based on the method described in Young, O Dwyer and Mason (2012). For spectral lines having maximum sensitivity between log T = 5.85 and log T = 6.25 K, we find that the velocity distribution peaks at around 0 km/s with an estimated error of 4 km/s. The width of the distribution decreases with temperature. The mean of the distribution shows a blue shift which increases with increasing temperature and the distribution also shows asymmetries towards blue-shift. Comparing these results with observables predicted from different coronal heating models, we find that these results are consistent with both steady and impulsive heating scenarios. Further observational constraints are needed to distinguish between these two heating scenarios.

  12. Identification of chicken cathelicidin-2 core elements involved in antibacterial and immunomodulatory activities.

    PubMed

    van Dijk, Albert; Molhoek, E Margo; Veldhuizen, Edwin J A; Bokhoven, Johanna L M Tjeerdsma-van; Wagendorp, Eveline; Bikker, Floris; Haagsman, Henk P

    2009-08-01

    Chicken host defense peptide cathelicidin-2 (CATH-2) is known to exert antimicrobial and immunomodulatory activities and consists of two alpha-helices connected by a hinge region. Here we report the biological properties of the separate alpha-helical segments and the importance of the proline residue in the hinge region. Substitution of proline-14 in the CATH-2 hinge region by leucine, but not by glycine, strongly reduced antibacterial and hemolytic activity. Furthermore, substitution by leucine strongly reduced the neutralization of LPS-induced cytokine production and peptide-induced monocyte chemotactic protein-1 (MCP-1) production by human peripheral blood mononuclear cells (PBMCs). This indicates that the hinge region is important for rapid penetration of the bacterial membrane as well as indirect and direct immunomodulatory activities. The highly cationic and amphipathic N-terminal segment (C1-15) exhibited very potent antibacterial activity and fast killing kinetics, while displaying low cytotoxicity towards chicken erythrocytes and PBMCs. The N-terminal and, to a lesser extent, the C-terminal helical regions potently neutralized LPS-induced release of TNFalpha, IL-6 and IL-10 by PBMCs, while IL-8 production was only moderately affected. These results indicate that core elements within mature CATH-2 can be identified that are linked to antibacterial and/or immunomodulatory activities. Further studies may lead to the development of peptide antibiotics with specific properties that can be used for prophylactic and/or therapeutic applications.

  13. Seven-core active fibre for application in telecommunication satellites

    NASA Astrophysics Data System (ADS)

    Filipowicz, Marta; Napierała, Marek; Murawski, Michał; Ostrowski, Łukasz; Szostkiewicz, Łukasz; Szymański, Michał; Tenderenda, Tadeusz; Anders, Krzysztof; Piramidowicz, Ryszard; Wójcik, Grzegorz; Makara, Mariusz; Poturaj, Krzysztof; Mergo, Paweł; Nasiłowski, Tomasz

    2015-12-01

    The use of optical elements and other photonic components makes it possible to overcome telecommunication satellite's bottleneck problems such as size and weight reduction. Despite the unquestionable potential of such elements, nowadays they are not widely used in systems operating in space. This is due to many factors, including the fact that space radiation has disruptive influence on optical fibre. Namely it introduces additional radiation induced attenuation (RIA) that significantly lowers efficiency of optical fibre based systems. However, there is a possibility to produce radiation-hardened (rad-hard) components. One of them is seven core erbium-doped active fibre (MC-EDF) for fibre amplifiers in satellites that we have been developing. In this paper we present a detailed description of seven core structure design as well as experimental results. We report that average gain of 20 dB in C-band with noise figure of 5.8 dB was obtained. We also confirmed that low crosstalk value for a multicore fibre amplifier based on our fibre can be achieved.

  14. Molecular Characterization of Pre-Core/Core and S Region of Hepatitis B Virus in Hemodialysis Patients With Occult Hepatitis B Infection

    PubMed Central

    Rastegarvand, Nasrin; Makvandi, Manoochehr; Samarbafzadeh, Alireza; Rasti, Mojtaba; Neisi, Niloofar; Pouremamali, Amir; Teimoori, Ali; Shabani, Abdolnabi

    2015-01-01

    Background: Occult hepatitis B infection (OBI) is a major public health problem worldwide, which harbors potential risk of hepatitis B virus (HBV) transmission through blood transfusion and transplantation. OBI is characterized by the presence of HBV-DNA in the blood or liver tissue without detectable hepatitis B surface antigen (HBsAg) in the serum. An important cause of OBI is the occurrence of mutations in the HBV genome, especially in the S region. Objectives: The study aims to analyze mutations in S and pre-core/core regions of HBV-DNA in hemodialysis patients. Patients and Methods: Sera of 216 hemodialysis patients were tested for HBsAg and hepatitis B core antibody (HBcAb) by ELISA. Sera of patients that tested negative for HBsAg were evaluated by PCR for the detection of HBV-DNA in the S and pre-core/core regions. In total, six PCR products were sequenced, aligned, and compared with the HBV reference sequence. Amino acid deletion and nucleotide substitution were considered mutations in S and pre-core/core regions of HBV-DNA. Results: Among 216 patients, 203 (93.98%) and 175 (81.01%) sera samples tested negative for HBsAg and HBcAb, respectively. Among all HBsAg-negative samples, six (2.9%) tested positive for HBV-DNA, including four (1.97%) for S and two (0.98%) for pre-core regions. All four (1.97%) samples that tested positive for the S region belonged to HBV-subtype awy. The amino acid sequence of all four samples showed the YMDD motif in position 204 (rtM204). There were three amino acid substitutions in the S region (T127P, P153L, and F170S) and one substitution in the RT region (Y135S). Moreover, two (0.98%) pre-core/core positive patients had an unexpected stop codon in position 1896. Conclusions: This study indicates that 2.9% of hemodialysis patients had OBI, which is considered as a major public health problem worldwide. Moreover, we observed three mutations in S region, including T127P, P153L, and F170S, which caused OBI. This study is first to

  15. Episodic specificity induction impacts activity in a core brain network during construction of imagined future experiences

    PubMed Central

    Madore, Kevin P.; Szpunar, Karl K.; Addis, Donna Rose; Schacter, Daniel L.

    2016-01-01

    Recent behavioral work suggests that an episodic specificity induction—brief training in recollecting the details of a past experience—enhances performance on subsequent tasks that rely on episodic retrieval, including imagining future experiences, solving open-ended problems, and thinking creatively. Despite these far-reaching behavioral effects, nothing is known about the neural processes impacted by an episodic specificity induction. Related neuroimaging work has linked episodic retrieval with a core network of brain regions that supports imagining future experiences. We tested the hypothesis that key structures in this network are influenced by the specificity induction. Participants received the specificity induction or one of two control inductions and then generated future events and semantic object comparisons during fMRI scanning. After receiving the specificity induction compared with the control, participants exhibited significantly more activity in several core network regions during the construction of imagined events over object comparisons, including the left anterior hippocampus, right inferior parietal lobule, right posterior cingulate cortex, and right ventral precuneus. Induction-related differences in the episodic detail of imagined events significantly modulated induction-related differences in the construction of imagined events in the left anterior hippocampus and right inferior parietal lobule. Resting-state functional connectivity analyses with hippocampal and inferior parietal lobule seed regions and the rest of the brain also revealed significantly stronger core network coupling following the specificity induction compared with the control. These findings provide evidence that an episodic specificity induction selectively targets episodic processes that are commonly linked to key core network regions, including the hippocampus. PMID:27601666

  16. Episodic specificity induction impacts activity in a core brain network during construction of imagined future experiences.

    PubMed

    Madore, Kevin P; Szpunar, Karl K; Addis, Donna Rose; Schacter, Daniel L

    2016-09-20

    Recent behavioral work suggests that an episodic specificity induction-brief training in recollecting the details of a past experience-enhances performance on subsequent tasks that rely on episodic retrieval, including imagining future experiences, solving open-ended problems, and thinking creatively. Despite these far-reaching behavioral effects, nothing is known about the neural processes impacted by an episodic specificity induction. Related neuroimaging work has linked episodic retrieval with a core network of brain regions that supports imagining future experiences. We tested the hypothesis that key structures in this network are influenced by the specificity induction. Participants received the specificity induction or one of two control inductions and then generated future events and semantic object comparisons during fMRI scanning. After receiving the specificity induction compared with the control, participants exhibited significantly more activity in several core network regions during the construction of imagined events over object comparisons, including the left anterior hippocampus, right inferior parietal lobule, right posterior cingulate cortex, and right ventral precuneus. Induction-related differences in the episodic detail of imagined events significantly modulated induction-related differences in the construction of imagined events in the left anterior hippocampus and right inferior parietal lobule. Resting-state functional connectivity analyses with hippocampal and inferior parietal lobule seed regions and the rest of the brain also revealed significantly stronger core network coupling following the specificity induction compared with the control. These findings provide evidence that an episodic specificity induction selectively targets episodic processes that are commonly linked to key core network regions, including the hippocampus.

  17. Core promoter: a critical region where the hepatitis B virus makes decisions.

    PubMed

    Quarleri, Jorge

    2014-01-14

    The core promoter (CP) of the viral genome plays an important role for hepatitis B virus (HBV) replication as it directs initiation of transcription for the synthesis of both the precore and pregenomic (pg) RNAs. The CP consists of the upper regulatory region and the basal core promoter (BCP). The CP overlaps with the 3'-end of the X open reading frames and the 5'-end of the precore region, and contains cis-acting elements that can independently direct transcription of the precore mRNA and pgRNA. Its transcription regulation is under strict control of viral and cellular factors. Even though this regulatory region exhibits high sequence conservation, when variations appear, they may contribute to the persistence of HBV within the host, leading to chronic infection and cirrhosis, and eventually, hepatocellular carcinoma. Among CP sequence variations, those occurring at BCP may dysregulate viral gene expression with emphasis in the hepatitis B e antigen, and contribute to disease progression. In this review these molecular aspects and pathologic topics of core promoter are deeply evaluated.

  18. A SYSTEMATIC SURVEY OF HIGH-TEMPERATURE EMISSION IN SOLAR ACTIVE REGIONS

    SciTech Connect

    Warren, Harry P.; Winebarger, Amy R.; Brooks, David H.

    2012-11-10

    The recent analysis of observations taken with the EUV Imaging Spectrometer and X-Ray Telescope instruments on Hinode suggests that well-constrained measurements of the temperature distribution in solar active regions can finally be made. Such measurements are critical for constraining theories of coronal heating. Past analysis, however, has suffered from limited sample sizes and large uncertainties at temperatures between 5 and 10 MK. Here we present a systematic study of the differential emission measure distribution in 15 active region cores. We focus on measurements in the 'inter-moss' region, that is, the region between the loop footpoints, where the observations are easier to interpret. To reduce the uncertainties at the highest temperatures we present a new method for isolating the Fe XVIII emission in the AIA/SDO 94 A channel. The resulting differential emission measure distributions confirm our previous analysis showing that the temperature distribution in an active region core is often strongly peaked near 4 MK. We characterize the properties of the emission distribution as a function of the total unsigned magnetic flux. We find that the amount of high-temperature emission in the active region core is correlated with the total unsigned magnetic flux, while the emission at lower temperatures, in contrast, is inversely related. These results provide compelling evidence that high-temperature active region emission is often close to equilibrium, although weaker active regions may be dominated by evolving million degree loops in the core.

  19. PATTERNS OF ACTIVITY IN A GLOBAL MODEL OF A SOLAR ACTIVE REGION

    SciTech Connect

    Bradshaw, S. J.; Viall, N. M. E-mail: Nicholeen.M.Viall@nasa.gov

    2016-04-10

    In this work we investigate the global activity patterns predicted from a model active region heated by distributions of nanoflares that have a range of frequencies. What differs is the average frequency of the distributions. The activity patterns are manifested in time lag maps of narrow-band instrument channel pairs. We combine hydrodynamic and forward modeling codes with a magnetic field extrapolation to create a model active region and apply the time lag method to synthetic observations. Our aim is not to reproduce a particular set of observations in detail, but to recover some typical properties and patterns observed in active regions. Our key findings are the following. (1) Cooling dominates the time lag signature and the time lags between the channel pairs are generally consistent with observed values. (2) Shorter coronal loops in the core cool more quickly than longer loops at the periphery. (3) All channel pairs show zero time lag when the line of sight passes through coronal loop footpoints. (4) There is strong evidence that plasma must be re-energized on a timescale comparable to the cooling timescale to reproduce the observed coronal activity, but it is likely that a relatively broad spectrum of heating frequencies are operating across active regions. (5) Due to their highly dynamic nature, we find nanoflare trains produce zero time lags along entire flux tubes in our model active region that are seen between the same channel pairs in observed active regions.

  20. Patterns of Activity in A Global Model of A Solar Active Region

    NASA Technical Reports Server (NTRS)

    Bradshaw, S. J.; Viall, N. M.

    2016-01-01

    In this work we investigate the global activity patterns predicted from a model active region heated by distributions of nanoflares that have a range of frequencies. What differs is the average frequency of the distributions. The activity patterns are manifested in time lag maps of narrow-band instrument channel pairs. We combine hydrodynamic and forward modeling codes with a magnetic field extrapolation to create a model active region and apply the time lag method to synthetic observations. Our aim is not to reproduce a particular set of observations in detail, but to recover some typical properties and patterns observed in active regions. Our key findings are the following. (1) Cooling dominates the time lag signature and the time lags between the channel pairs are generally consistent with observed values. (2) Shorter coronal loops in the core cool more quickly than longer loops at the periphery. (3) All channel pairs show zero time lag when the line of sight passes through coronal loop footpoints. (4) There is strong evidence that plasma must be re-energized on a timescale comparable to the cooling timescale to reproduce the observed coronal activity, but it is likely that a relatively broad spectrum of heating frequencies are operating across active regions. (5) Due to their highly dynamic nature, we find nanoflare trains produce zero time lags along entire flux tubes in our model active region that are seen between the same channel pairs in observed active regions.

  1. Precore/Core Region Mutations in Hepatitis B Virus DNA Predict Postoperative Survival in Hepatocellular Carcinoma

    PubMed Central

    Zhao, Yufei; Zhang, Lan; Zhao, Yue; Liu, Binghui; Guo, Zhanjun

    2015-01-01

    Hepatitis B virus (HBV) DNA is prone to mutations because of the proofreading deficiencies of HBV polymerase. We have identified hepatocellular carcinoma (HCC) survival-associated HBV mutations in the X protein region of HBV DNA. In the present study, we extend our research to assess HCC survival-associated HBV mutations in the HBV precore/core (PreC/C) region. The PreC/C region was amplified and sequenced and the HBV mutations were identified according to the NCBI database (http://www.ncbi.nlm.nih.gov/genome/5536). The relationships between the mutations in the PreC/C region and HCC survival were analyzed. Survival curves were generated using the Kaplan-Meier method, and comparisons between the curves were made using the log-rank test. Multivariate survival analysis was performed using a Cox proportional hazards model. After adjusting for clinical characteristics, the 1915, 2134, 2221, 2245 and 2288 mutational sites were identified as statistically significant independent predictors of HCC survival by multivariate survival analysis using a Cox proportional hazards model. In addition, the mutational site of 1896 was identified for its association with survival at a borderline significance level. A total of five mutations in the precore/core region were identified as independent predictors of postoperative survival in HCC patients. The analysis of HBV DNA mutations may help identify patient subgroups with poor prognosis and may help refine therapeutic decisions regarding HCC patients. PMID:26208136

  2. Precore/Core Region Mutations in Hepatitis B Virus DNA Predict Postoperative Survival in Hepatocellular Carcinoma.

    PubMed

    Xie, Ying; Liu, Shufeng; Zhao, Yufei; Zhang, Lan; Zhao, Yue; Liu, Binghui; Guo, Zhanjun

    2015-01-01

    Hepatitis B virus (HBV) DNA is prone to mutations because of the proofreading deficiencies of HBV polymerase. We have identified hepatocellular carcinoma (HCC) survival-associated HBV mutations in the X protein region of HBV DNA. In the present study, we extend our research to assess HCC survival-associated HBV mutations in the HBV precore/core (PreC/C) region. The PreC/C region was amplified and sequenced and the HBV mutations were identified according to the NCBI database (http://www.ncbi.nlm.nih.gov/genome/5536). The relationships between the mutations in the PreC/C region and HCC survival were analyzed. Survival curves were generated using the Kaplan-Meier method, and comparisons between the curves were made using the log-rank test. Multivariate survival analysis was performed using a Cox proportional hazards model. After adjusting for clinical characteristics, the 1915, 2134, 2221, 2245 and 2288 mutational sites were identified as statistically significant independent predictors of HCC survival by multivariate survival analysis using a Cox proportional hazards model. In addition, the mutational site of 1896 was identified for its association with survival at a borderline significance level. A total of five mutations in the precore/core region were identified as independent predictors of postoperative survival in HCC patients. The analysis of HBV DNA mutations may help identify patient subgroups with poor prognosis and may help refine therapeutic decisions regarding HCC patients.

  3. Gas analysis in the UV region using a long-length hollow core waveguide

    NASA Astrophysics Data System (ADS)

    Kotschau, R.; Eckhardt, Hanns-S.; Klein, Karl-Friedrich; Behler, Klaus; Hillrichs, Georg

    2003-07-01

    In the DUV-region and MIR-region, the so-called Hollow-Core-Waveguide is an alternative for light-delivery systems, because flexible silica-based fibers are no lnoger useable due to the high intrinsic absorption of silica. In additionl to light-transportation, only the HCW can be used as an intrinsic sensor: due to the long path-length through the HCW with similar intensity profiles at the input and output, the spectral absorption of the gas under test can easily be monitored. Up to now, the gases are analyzed in the MIR-region, mainly. However, the UV-region offers a lot of advantages. Using commercially available components for the UV-light source and the detector-system, the whole system with UV hollow-core-waveguides has to be studied in the wavelength-region from 170 nm up to 350 nm. With this experimental system, it is obvious to observe the UV-absorption of air and carbon dioxide below 200 nm, using nitrogen as a reference gas. In addition, ozone generated by the deuterium-lamp itself and several gas mixtures (e.g. 2 ppm toluene or xylene in cabon dioxide) were studied in detail.

  4. Accelerated gravity testing of aquitard core permeability and implications at formation and regional scale

    NASA Astrophysics Data System (ADS)

    Timms, W. A.; Crane, R.; Anderson, D. J.; Bouzalakos, S.; Whelan, M.; McGeeney, D.; Rahman, P. F.; Guinea, A.; Acworth, R. I.

    2015-03-01

    Evaluating the possibility of leakage through low permeability geological strata is critically important for sustainable water supplies, the extraction of fuels from strata such as coal beds, and the confinement of waste within the earth. The current work demonstrates that relatively rapid and reliable hydraulic conductivity (K) measurement of aquitard cores using accelerated gravity can inform and constrain larger scale assessments of hydraulic connectivity. Steady state fluid velocity through a low K porous sample is linearly related to accelerated gravity (g-level) in a centrifuge permeameter (CP) unless consolidation or geochemical reactions occur. The CP module was custom designed to fit a standard 2 m diameter geotechnical centrifuge (550 g maximum) with a capacity for sample dimensions of 30 to 100 mm diameter and 30 to 200 mm in length, and a maximum total stress of ~2 MPa at the base of the core. Formation fluids were used as influent to limit any shrink-swell phenomena which may alter the permeability. Vertical hydraulic conductivity (Kv) results from CP testing of cores from three sites within the same regional clayey silt formation varied (10-7 to 10-9 m s-1, n = 14). Results at one of these sites (1.1 × 10-10 to 3.5 × 10-9 m s-1, n = 5) that were obtained in < 24 h were similar to in situ Kv values (3 × 10-9 m s-1) from pore pressure responses over several weeks within a 30 m clayey sequence. Core scale and in situ Kv results were compared with vertical connectivity within a regional flow model, and considered in the context of heterogeneity and preferential flow paths at site and formation scale. More reliable assessments of leakage and solute transport though aquitards over multi-decadal timescales can be achieved by accelerated core testing together with advanced geostatistical and numerical methods.

  5. Unencumbered Pol β lyase activity in nucleosome core particles.

    PubMed

    Rodriguez, Yesenia; Howard, Michael J; Cuneo, Matthew J; Prasad, Rajendra; Wilson, Samuel H

    2017-09-06

    Packaging of DNA into the nucleosome core particle (NCP) is considered to exert constraints to all DNA-templated processes, including base excision repair where Pol β catalyzes two key enzymatic steps: 5'-dRP lyase gap trimming and template-directed DNA synthesis. Despite its biological significance, knowledge of Pol β activities on NCPs is still limited. Here, we show that removal of the 5'-dRP block by Pol β is unaffected by NCP constraints at all sites tested and is even enhanced near the DNA ends. In contrast, strong inhibition of DNA synthesis is observed. These results indicate 5'-dRP gap trimming proceeds unperturbed within the NCP; whereas, gap filling is strongly limited. In the absence of additional factors, base excision repair in NCPs will stall at the gap-filling step. Published by Oxford University Press on behalf of Nucleic Acids Research 2017.

  6. Active Heave-Compensated Coring On The New Jersey Shelf

    NASA Astrophysics Data System (ADS)

    Nielson, D. L.; Pardey, M.; Austin, J. A.; Goff, J. A.; Alexander, C.; Christensen, B. A.; Gulick, S. P.; Fulthorpe, C. S.; Nordfjord, S.; Sommerfield, C.; Venherm, C.

    2003-12-01

    The continental shelves are of obvious scientific and strategic importance. However, the ability to cost-effectively collect core samples of continental shelf sediments has been limited by technical difficulties. Many sites of scientific interest are too shallow to be drilled by large drill ships, and they are too deep to be drilled economically from jack-up platforms. DOSECC has developed an Active Heave Compensated (AHC800) drilling system under sponsorship of the Office of Naval Research to overcome these obstacles by building a small active heave compensated drilling rig that can be used to collect high-quality core from selected vessels of opportunity. The AHC800 drilling rig is designed to collect continuous core to a total drill string length of 800 m. Water depths of 200 m and less are optimal; however, with some modification operation in deeper water is possible. The AHC800 senses vessel heave using a constantly tensioned low-stretch taut line attached to a seafloor weight. A linear position transducer is attached to this taut line and through the data acquisition system, the ship's distance from the bottom is communicated to the heave compensation computer running Labview RT operating system and object-based software language. This real-time control system is used to achieve a 10-ms control loop for both data gathering and output functions. The Labview RT system continuously controls two hydraulic cylinders that keep the heave carriage and the drill string at the same reference distance from the bottom. The AHC800 system was used on the R/V Knorr on the New Jersey continental shelf in water depths from 74 to 130 m from 25 Sep to 15 Oct 2002. The AHC800 system performed up to and beyond its design specifications. The rig was designed to compensate for 2.44 m of heave with an 8 s period. However, the Knorr's response was a 6 s period resulting in a significant increase in the required acceleration as well as a faster response time for the system as a whole

  7. Energy Flow Continuity in Solar Active Regions

    NASA Technical Reports Server (NTRS)

    Schatten, K. H.

    1984-01-01

    The models for sunspots are combined into an active region model with consideration for the energy flow beneath active regions. An apparent average energy balance exists between the sunspot deficit and the facular excess, i.e., no 11 year variations in solar luminosity associated with the activity centers. This is seen as a consequence of the upper convection zone's inability to store these significant amounts of energy for periods greatly in excess of weeks. This view is supported by observed active region behavior and detailed numerical modelling. Increases in facular and spot brightness are nearly commensurate, with the faculae outlasting the spots on time scales of the order of weeks to a couple of months. Foukal finds the radiation (deficit from a sunspot blocking model) recovers slowly on a timescale of approximately 83 days.

  8. Effect of geometrical and flow parameters on high-effectiveness region of film cooling. [effect of wall curvature on length of the core region

    NASA Technical Reports Server (NTRS)

    Braum, W. H.

    1974-01-01

    Previous analyses for an inviscid jet injected into a stream and the turbulent mixing region which forms between jet and stream are used to find the extent of the core region in a cooling film by calculating the growth of the turbulent boundary layer on the downstream wall. The core is a region of nearly perfect effectiveness which ends at the intersection of the boundary layer and the mixing region. The calculations show that the most important geometrical factor bearing on the length of the core is the curvature of the wall. When the radius of curvature is large, the boundary layer remains thin and the core is long. The effects of Reynolds number, total-pressure difference between film and stream, and lateral position of the downstream wall are also investigated. The step configuration is shown to have a longer core than the slot for the same flow conditions.

  9. Right Anterior Insula: Core Region of Hallucinations in Cognitive Neurodegenerative Diseases

    PubMed Central

    Blanc, Frédéric; Noblet, Vincent; Philippi, Nathalie; Cretin, Benjamin; Foucher, Jack; Armspach, Jean-Paul; Rousseau, François

    2014-01-01

    Objectives We investigated the neural basis of hallucinations Alzheimer's disease (AD) by applying voxel-based morphometry (VBM) to anatomical and functional data from the AD Neuroimaging Initiative. Methods AD patients with hallucinations, based on the Neuropsychiatric Inventory (NPI-Q) (AD-hallu group; n = 39), were compared to AD patients without hallucinations matched for age, sex, educational level, handedness and MMSE (AD-c group; n = 39). Focal brain volume on MRI was analyzed and compared between the two groups according to the VBM method. We also performed voxel-level correlations between brain volume and hallucinations intensity. A similar paradigm was used for the PET analysis. “Core regions” (i.e. regions identified in both MRI and PET analyses, simply done by retaining the clusters obtained from the two analyses that are overlapping) were then determined. Results Regions with relative atrophy in association with hallucinations were: anterior part of the right insula, left superior frontal gyrus and lingual gyri. Regions with relative hypometabolism in association with hallucinations were a large right ventral and dorsolateral prefrontal area. "Core region" in association with hallucinations was the right anterior part of the insula. Correlations between intensity of hallucinations and brain volume were found in the right anterior insula, precentral gyrus, superior temporal gyrus, and left precuneus. Correlations between intensity of hallucinations and brain hypometabolism were found in the left midcingulate gyrus. We checked the neuropathological status and we found that the 4 patients autopsied in the AD-hallu group had the mixed pathology AD and Dementia with Lewy bodies (DLB). Conclusion Neural basis of hallucinations in cognitive neurodegenerative diseases (AD or AD and DLB) include a right predominant anterior-posterior network, and the anterior insula as the core region. This study is coherent with the top-down/bottom-up hypotheses on

  10. Polar Field Reversals and Active Region Decay

    NASA Astrophysics Data System (ADS)

    Petrie, Gordon; Ettinger, Sophie

    2015-07-01

    We study the relationship between polar field reversals and decayed active region magnetic flux. Photospheric active region flux is dispersed by differential rotation and turbulent diffusion, and is transported poleward by meridional flows and diffusion. We summarize the published evidence from observation and modeling of the influence of meridional flow variations and decaying active region flux's spatial distribution, such as the Joy's law tilt angle. Using NSO Kitt Peak synoptic magnetograms covering cycles 21-24, we investigate in detail the relationship between the transport of decayed active region flux to high latitudes and changes in the polar field strength, including reversals in the magnetic polarity at the poles. By means of stack plots of low- and high-latitude slices of the synoptic magnetograms, the dispersal of flux from low to high latitudes is tracked, and the timing of this dispersal is compared to the polar field changes. In the most abrupt cases of polar field reversal, a few activity complexes (systems of active regions) are identified as the main cause. The poleward transport of large quantities of decayed trailing-polarity flux from these complexes is found to correlate well in time with the abrupt polar field changes. In each case, significant latitudinal displacements were found between the positive and negative flux centroids of the complexes, consistent with Joy's law bipole tilt with trailing-polarity flux located poleward of leading-polarity flux. The activity complexes of the cycle 21 and 22 maxima were larger and longer-lived than those of the cycle 23 and 24 maxima, and the poleward surges were stronger and more unipolar and the polar field changes larger and faster. The cycle 21 and 22 polar reversals were dominated by only a few long-lived complexes whereas the cycle 23 and 24 reversals were the cumulative effects of more numerous, shorter-lived regions. We conclude that sizes and lifetimes of activity complexes are key to

  11. Polar Field Reversals and Active Region Decay

    NASA Astrophysics Data System (ADS)

    Petrie, Gordon; Ettinger, Sophie

    2017-09-01

    We study the relationship between polar field reversals and decayed active region magnetic flux. Photospheric active region flux is dispersed by differential rotation and turbulent diffusion, and is transported poleward by meridional flows and diffusion. We summarize the published evidence from observation and modeling of the influence of meridional flow variations and decaying active region flux's spatial distribution, such as the Joy's law tilt angle. Using NSO Kitt Peak synoptic magnetograms covering cycles 21-24, we investigate in detail the relationship between the transport of decayed active region flux to high latitudes and changes in the polar field strength, including reversals in the magnetic polarity at the poles. By means of stack plots of low- and high-latitude slices of the synoptic magnetograms, the dispersal of flux from low to high latitudes is tracked, and the timing of this dispersal is compared to the polar field changes. In the most abrupt cases of polar field reversal, a few activity complexes (systems of active regions) are identified as the main cause. The poleward transport of large quantities of decayed trailing-polarity flux from these complexes is found to correlate well in time with the abrupt polar field changes. In each case, significant latitudinal displacements were found between the positive and negative flux centroids of the complexes, consistent with Joy's law bipole tilt with trailing-polarity flux located poleward of leading-polarity flux. The activity complexes of the cycle 21 and 22 maxima were larger and longer-lived than those of the cycle 23 and 24 maxima, and the poleward surges were stronger and more unipolar and the polar field changes larger and faster. The cycle 21 and 22 polar reversals were dominated by only a few long-lived complexes whereas the cycle 23 and 24 reversals were the cumulative effects of more numerous, shorter-lived regions. We conclude that sizes and lifetimes of activity complexes are key to

  12. Thalamic label patterns suggest primary and ventral auditory fields are distinct core regions.

    PubMed

    Storace, Douglas A; Higgins, Nathan C; Read, Heather L

    2010-05-15

    A hierarchical scheme proposed by Kaas and colleagues suggests that primate auditory cortex can be divided into core and belt regions based on anatomic connections with thalamus and distinctions among response properties. According to their model, core auditory cortex receives predominantly unimodal sensory input from the ventral nucleus of the medial geniculate body (MGBv); whereas belt cortex receives predominantly cross-modal sensory input from nuclei outside the MGBv. We previously characterized distinct response properties in rat primary (A1) versus ventral auditory field (VAF) cortex; however, it has been unclear whether VAF should be categorized as a core or belt auditory cortex. The current study employed high-resolution functional imaging to map intrinsic metabolic responses to tones and to guide retrograde tracer injections into A1 and VAF. The size and density of retrogradely labeled somas in the medial geniculate body (MGB) were examined as a function of their position along the caudal-to-rostral axis, subdivision of origin, and cortical projection target. A1 and VAF projecting neurons were found in the same subdivisions of the MGB but in rostral and caudal parts, respectively. Less than 3% of the cells projected to both regions. VAF projecting neurons were smaller than A1 projecting neurons located in dorsal (MGBd) and suprageniculate (SG) nuclei. Thus, soma size varied with both caudal-rostral position and cortical target. Finally, the majority (>70%) of A1 and VAF projecting neurons were located in MGBv. These MGB connection profiles suggest that rat auditory cortex, like primate auditory cortex, is made up of multiple distinct core regions. (c) 2010 Wiley-Liss, Inc.

  13. Safety analysis for operating the Annular Core Research Reactor with Cintichem-type targets installed in the central region of the core

    SciTech Connect

    PARMA JR.,EDWARD J.

    2000-01-01

    Production of the molybdenum-99 isotope at the Annular Core Research Reactor requires highly enriched, uranium oxide loaded targets to be irradiated for several days in the high neutron-flux region of the core. This report presents the safety analysis for the irradiation of up to seven Cintichem-type targets in the central region of the core and compares the results to the Annular Core Research Reactor Safety Analysis Report. A 19 target grid configuration is presented that allows one to seven targets to be irradiated, with the remainder of the grid locations filled with aluminum ''void'' targets. Analyses of reactor, neutronic, thermal hydraulics, and heat transfer calculations are presented. Steady-state operation and accident scenarios are analyzed with the conclusion that the reactor can be operated safely with seven targets in the grid, and no additional risk to the public.

  14. Growth and Decay of Solar Active Regions

    NASA Astrophysics Data System (ADS)

    Dobias, J. J.; Chapman, G. A.; Cookson, A. M.; Preminger, D. G.; Walton, S. R.

    2002-05-01

    We report here on a study of growth and decay rates of sunspot and facular areas of solar active regions. The data used in this project come from an ongoing program of daily photometric observations of the sun with the Cartesian Full Disk Telescope No. 1 (CFDT1) at the San Fernando Observatory (SFO). Sunspot regions are determined from images taken with a red filter centered at 672.3 nm with a bandpass of 9.7 nm, while images taken with a Ca II K line filter, centered at 393.4 nm and with a bandpass of only 1nm, are used to find facular areas. Before any areas can be found on any observed images, they have to be calibrated then flattened by removing limb darkening thus producing contrast images. Sunspot areas are then determined from any pixel with contrast of -8.5% or less, while any pixel on a K line contrast image with a contrast of +4.8%/μ or higher, where μ is the cosine of the heliocentric angle, is considered to be a facular pixel. To identify the areas as clearly as possible, studied active regions were usually observed on the sun with relatively low activity; that means that each region is either alone on the sun's disk or with only very few other active regions present. Furthermore, to obtain growth and decay patterns of the areas as reliably as possible, only such active regions must be chosen for which there is as complete observational coverage as possible. At the present time studies have been finished for only a few active regions, but analysis of several others is on going. Obtained results will be presented at the meeting. This work is supported by NSF grant ATM-9912132 and NASA grants NAG5-7191 and NAG5-7778.

  15. Intrinsic Connections of the Core Auditory Cortical Regions and Rostral Supratemporal Plane in the Macaque Monkey.

    PubMed

    Scott, Brian H; Leccese, Paul A; Saleem, Kadharbatcha S; Kikuchi, Yukiko; Mullarkey, Matthew P; Fukushima, Makoto; Mishkin, Mortimer; Saunders, Richard C

    2017-01-01

    In the ventral stream of the primate auditory cortex, cortico-cortical projections emanate from the primary auditory cortex (AI) along 2 principal axes: one mediolateral, the other caudorostral. Connections in the mediolateral direction from core, to belt, to parabelt, have been well described, but less is known about the flow of information along the supratemporal plane (STP) in the caudorostral dimension. Neuroanatomical tracers were injected throughout the caudorostral extent of the auditory core and rostral STP by direct visualization of the cortical surface. Auditory cortical areas were distinguished by SMI-32 immunostaining for neurofilament, in addition to established cytoarchitectonic criteria. The results describe a pathway comprising step-wise projections from AI through the rostral and rostrotemporal fields of the core (R and RT), continuing to the recently identified rostrotemporal polar field (RTp) and the dorsal temporal pole. Each area was strongly and reciprocally connected with the areas immediately caudal and rostral to it, though deviations from strictly serial connectivity were observed. In RTp, inputs converged from core, belt, parabelt, and the auditory thalamus, as well as higher order cortical regions. The results support a rostrally directed flow of auditory information with complex and recurrent connections, similar to the ventral stream of macaque visual cortex.

  16. The 17 GHz active region number

    SciTech Connect

    Selhorst, C. L.; Pacini, A. A.; Costa, J. E. R.; Giménez de Castro, C. G.; Valio, A.; Shibasaki, K.

    2014-08-01

    We report the statistics of the number of active regions (NAR) observed at 17 GHz with the Nobeyama Radioheliograph between 1992, near the maximum of cycle 22, and 2013, which also includes the maximum of cycle 24, and we compare with other activity indexes. We find that NAR minima are shorter than those of the sunspot number (SSN) and radio flux at 10.7 cm (F10.7). This shorter NAR minima could reflect the presence of active regions generated by faint magnetic fields or spotless regions, which were a considerable fraction of the counted active regions. The ratio between the solar radio indexes F10.7/NAR shows a similar reduction during the two minima analyzed, which contrasts with the increase of the ratio of both radio indexes in relation to the SSN during the minimum of cycle 23-24. These results indicate that the radio indexes are more sensitive to weaker magnetic fields than those necessary to form sunspots, of the order of 1500 G. The analysis of the monthly averages of the active region brightness temperatures shows that its long-term variation mimics the solar cycle; however, due to the gyro-resonance emission, a great number of intense spikes are observed in the maximum temperature study. The decrease in the number of these spikes is also evident during the current cycle 24, a consequence of the sunspot magnetic field weakening in the last few years.

  17. The activated sludge ecosystem contains a core community of abundant organisms.

    PubMed

    Saunders, Aaron M; Albertsen, Mads; Vollertsen, Jes; Nielsen, Per H

    2016-01-01

    Understanding the microbial ecology of a system requires that the observed population dynamics can be linked to their metabolic functions. However, functional characterization is laborious and the choice of organisms should be prioritized to those that are frequently abundant (core) or transiently abundant, which are therefore putatively make the greatest contribution to carbon turnover in the system. We analyzed the microbial communities in 13 Danish wastewater treatment plants with nutrient removal in consecutive years and a single plant periodically over 6 years, using Illumina sequencing of 16S ribosomal RNA amplicons of the V4 region. The plants contained a core community of 63 abundant genus-level operational taxonomic units (OTUs) that made up 68% of the total reads. A core community consisting of abundant OTUs was also observed within the incoming wastewater to three plants. The net growth rate for individual OTUs was quantified using mass balance, and it was found that 10% of the total reads in the activated sludge were from slow or non-growing OTUs, and that their measured abundance was primarily because of immigration with the wastewater. Transiently abundant organisms were also identified. Among them the genus Nitrotoga (class Betaproteobacteria) was the most abundant putative nitrite oxidizer in a number of activated sludge plants, which challenges previous assumptions that Nitrospira (phylum Nitrospirae) are the primary nitrite-oxidizers in activated sludge systems with nutrient removal.

  18. The activated sludge ecosystem contains a core community of abundant organisms

    PubMed Central

    Saunders, Aaron M; Albertsen, Mads; Vollertsen, Jes; Nielsen, Per H

    2016-01-01

    Understanding the microbial ecology of a system requires that the observed population dynamics can be linked to their metabolic functions. However, functional characterization is laborious and the choice of organisms should be prioritized to those that are frequently abundant (core) or transiently abundant, which are therefore putatively make the greatest contribution to carbon turnover in the system. We analyzed the microbial communities in 13 Danish wastewater treatment plants with nutrient removal in consecutive years and a single plant periodically over 6 years, using Illumina sequencing of 16S ribosomal RNA amplicons of the V4 region. The plants contained a core community of 63 abundant genus-level operational taxonomic units (OTUs) that made up 68% of the total reads. A core community consisting of abundant OTUs was also observed within the incoming wastewater to three plants. The net growth rate for individual OTUs was quantified using mass balance, and it was found that 10% of the total reads in the activated sludge were from slow or non-growing OTUs, and that their measured abundance was primarily because of immigration with the wastewater. Transiently abundant organisms were also identified. Among them the genus Nitrotoga (class Betaproteobacteria) was the most abundant putative nitrite oxidizer in a number of activated sludge plants, which challenges previous assumptions that Nitrospira (phylum Nitrospirae) are the primary nitrite-oxidizers in activated sludge systems with nutrient removal. PMID:26262816

  19. Structure analysis and core community detection of embodied resources networks among regional industries

    NASA Astrophysics Data System (ADS)

    He, Xijun; Dong, Yanbo; Wu, Yuying; Wei, Guodan; Xing, Lizhi; Yan, Jia

    2017-08-01

    To address the double pressure of scarce resources and regional industrial isomorphism, this paper applied the concepts of exergy and embodied resources based on economic input-output (I-O) data. We constructed the embodied resources networks among the regional industries of Beijing-Tianjin-Hebei (also known as Jing-Jin-Ji) in China. We analyzed the rules of embodied resources consumption in the area's industries, identified the core community structures, and studied the characteristics of industrial homogeneity through regional comparisons. The results showed that the dependence on scarce resources of industrial operations in Beijing was less than in Jin-Ji, while the dependence on finance, technology, information, and other service resources in Beijing was higher than in Jin-Ji. The I-O efficiency of embodied resources among industries and the agglomeration of correlation relationships in industries with large embodied resources were higher than in Jin-Ji. The industrial coincidence degree in the ;bridge; industries and in the core community in Jin-Ji was higher than in Jing-Jin and Jing-Ji, which means the industrial homogeneous competition of Jin-Ji was higher, too. This study makes a significant contribution toward promoting the dislocation development of regional industries, accelerating the coordination of resources, and reducing homogeneity competition.

  20. Cytotoxic T lymphocytes and CD4 epitope mutations in the pre-core/core region of hepatitis B virus in chronic hepatitis B carriers in Northeast Iran.

    PubMed

    Zhand, Sareh; Tabarraei, Alijan; Nazari, Amineh; Moradi, Abdolvahab

    2017-07-25

    Hepatitis B virus (HBV) is vulnerable to many various mutations. Those within epitopes recognized by sensitized T cells may influence the re-emergence of the virus. This study was designed to investigate the mutation in immune epitope regions of HBV pre-core/core among chronic HBV patients of Golestan province, Northeast Iran. In 120 chronic HBV carriers, HBV DNA was extracted from blood plasma samples and PCR was done using specific primers. Direct sequencing and alignment of the pre-core/core region were applied using reference sequence from Gene Bank database (Accession Number AB033559). The study showed 27 inferred amino acid substitutions, 9 of which (33.3%) were in CD4 and 2 (7.4%) in cytotoxic T lymphocytes' (CTL) epitopes and 16 other mutations (59.2%) were observed in other regions. CTL escape mutations were not commonly observed in pre-core/core sequences of chronic HBV carriers in the locale of study. It can be concluded that most of the inferred amino acid substitutions occur in different immune epitopes other than CTL and CD4.

  1. The Magnetic Free Energy in Active Regions

    NASA Technical Reports Server (NTRS)

    Metcalf, Thomas R.; Mickey, Donald L.; LaBonte, Barry J.

    2001-01-01

    The magnetic field permeating the solar atmosphere governs much of the structure, morphology, brightness, and dynamics observed on the Sun. The magnetic field, especially in active regions, is thought to provide the power for energetic events in the solar corona, such as solar flares and Coronal Mass Ejections (CME) and is believed to energize the hot coronal plasma seen in extreme ultraviolet or X-rays. The question remains what specific aspect of the magnetic flux governs the observed variability. To directly understand the role of the magnetic field in energizing the solar corona, it is necessary to measure the free magnetic energy available in active regions. The grant now expiring has demonstrated a new and valuable technique for observing the magnetic free energy in active regions as a function of time.

  2. Fluxon Modeling of Active Region Evolution

    NASA Astrophysics Data System (ADS)

    Deforest, C. E.; Kankelborg, C. C.; Davey, A. R.; Rachmeler, L.

    2006-12-01

    We present current results and status on fluxon modeling of free energy buildup and release in active regions. Our publicly available code, FLUX, has the unique ability to track magnetic energy buildup with a truly constrained topology in evolving, nonlinear force-free conditions. Recent work includes validation of the model against Low &Lou force-free field solutions, initial evolution studies of idealized active regions, and inclusion of locally parameterized reconnection into the model. FLUX is uniquely able to simulate complete active regions in 3-D on a single workstation; we estimate that a parallelized fluxon model, together with computer vision code to ingest solar data, could run faster than real time on a cluster of \\textasciitilde 30 CPUs and hence provide a true predictive space weather model in the style of predictive simulations of terrestrial weather.

  3. Activity of core-modified 10-23 DNAzymes against HCV.

    PubMed

    Robaldo, Laura; Berzal-Herranz, Alfredo; Montserrat, Javier M; Iribarren, Adolfo M

    2014-09-01

    The highly conserved untranslated regions of the hepatitis C virus (HCV) play a fundamental role in viral translation and replication and are therefore attractive targets for drug development. A set of modified DNAzymes carrying (2'R)-, (2'S)-2'-deoxy-2'-C-methyl- and -2'-O-methylnucleosides at various positions of the catalytic core were assayed against the 5'-internal ribosome entry site element (5'-IRES) region of HCV. Intracellular stability studies showed that the highest stabilization effects were obtained when the DNAzymes' cores were jointly modified with 2'-C-methyl- and 2'-O-methylnucleosides, yielding an increase by up to fivefold in the total DNAzyme accumulation within the cell milieu within 48 h of transfection. Different regions of the HCV IRES were explored with unmodified 10-23 DNAzymes for accessibility. A subset of these positions was tested for DNAzyme activity using an HCV IRES-firefly luciferase translation-dependent RNA (IRES-FLuc) transcript, in the rabbit reticulocyte lysate system and in the Huh-7 human hepatocarcinoma cell line. Inhibition of IRES-dependent translation by up to 65 % was observed for DNAzymes targeting its 285 position, and it was also shown that the modified DNAzymes are as active as the unmodified one.

  4. Current Helicity of Emerging Active Regions

    NASA Astrophysics Data System (ADS)

    Pevtsov, A.

    2002-12-01

    We employ the SOHO MDI magnetograms and EIT images to study evolution of current helicity of solar active regions during early stages of their emergence. Using longitudinal magnetograms we compute linear force-free fields ∇ x B = α B and compare extrapolated field lines with bright coronal structures to constrain the value of α. At the beginning of emergence all studied regions have small α ~eq 0. As active region grows, α gradually increases and reaches a "plateau" within approximately one day of emergence. Using change in separation between negative and positive fluxes, we divide regions on "slow" and "rapid" emergence. Three regions show "slow" (> 1 day) emergence. For these regions α increases faster than the separation. In two "rapid" (< 1 day) emerging regions α grows slower that the separation. This observed evolution of current helicity is in agreement with Longcope and Welsch (2000) model of emergence of subphotospheric twisted flux rope into the corona. škip 0.5 truecm V. Maleev is NSO 2002 Summer Research Assistant from St. Petersburg State University, Russia

  5. Active bacterial core surveillance of the emerging infections program network.

    PubMed Central

    Schuchat, A.; Hilger, T.; Zell, E.; Farley, M. M.; Reingold, A.; Harrison, L.; Lefkowitz, L.; Danila, R.; Stefonek, K.; Barrett, N.; Morse, D.; Pinner, R.

    2001-01-01

    Active Bacterial Core surveillance (ABCs) is a collaboration between the Centers for Disease Control and Prevention and several state health departments and universities participating in the Emerging Infections Program Network. ABCs conducts population-based active surveillance, collects isolates, and performs studies of invasive disease caused by Streptococcus pneumoniae, group A and group B Streptococcus, Neisseria meningitidis, and Haemophilus influenzae for a population of 17 to 30 million. These pathogens caused an estimated 97,000 invasive cases, resulting in 10,000 deaths in the United States in 1998. Incidence rates of these pathogens are described. During 1998, 25% of invasive pneumococcal infections in ABCs areas were not susceptible to penicillin, and 13.3% were not susceptible to three classes of antibiotics. In 1998, early-onset group B streptococcal disease had declined by 65% over the previous 6 years. More information on ABCs is available at www.cdc.gov/ncidod/dbmd/abcs. ABCs specimens will soon be available to researchers through an archive. PMID:11266299

  6. ON THE FORMATION OF ACTIVE REGIONS

    SciTech Connect

    Stein, Robert F.; Nordlund, Ake E-mail: aake@nbi.dk

    2012-07-01

    Magnetoconvection can produce an active region without an initial coherent flux tube. A simulation was performed where a uniform, untwisted, horizontal magnetic field of 1 kG strength was advected into the bottom of a computational domain 48 Mm wide by 20 Mm deep. The up and down convective motions produce a hierarchy of magnetic loops with a wide range of scales, with smaller loops riding 'piggy-back' in a serpentine fashion on larger loops. When a large loop approaches the surface, it produces a small active region with a compact leading spot and more diffuse following spots.

  7. Polar Field Reversals and Active Region Decay

    NASA Astrophysics Data System (ADS)

    Petrie, Gordon; Ettinger, Sophie

    2015-04-01

    We study the relationship between polar field reversals and decayed active region magnetic flux. Photospheric active region flux is dispersed by differential rotation and turbulent diffusion, and is transported poleward by meridional flows and diffusion. Using NSO Kitt Peak synoptic magnetograms, we investigate in detail the relationship between the transport of decayed active region flux to high latitudes and changes in the polar field strength, including reversals in the magnetic polarity at the poles. By means of stack plots of low- and high-latitude slices of the synoptic magnetograms, the dispersal of flux from low to high latitudes is tracked, and the timing of this dispersal is compared to the polar field changes. In the most abrupt cases of polar field reversal, a few activity complexes (systems of active regions) are identified as the main cause. The poleward transport of large quantities of decayed lagging-polarity flux from these complexes is found to correlate well in time with the abrupt polar field changes. In each case, significant latitudinal displacements were found between the positive and negative flux centroids of the complexes, consistent with Joy's law bipole tilt with lagging-polarity flux located poleward of leading-polarity flux. This work is carried out through the National Solar Observatory Summer Research Assistantship (SRA) Program. The National Solar Observatory is operated by the Association of Universities for Research in Astronomy, Inc. (AURA) under cooperative agreement with the National Science Foundation.

  8. Long-term survival and regeneration of neuronal and vasculature cells inside the core region after ischemic stroke in adult mice.

    PubMed

    Jiang, Michael Qize; Zhao, Ying-Ying; Cao, Wenyuan; Wei, Zheng Zachory; Gu, Xiaohuan; Wei, Ling; Yu, Shan Ping

    2016-08-11

    Focal cerebral ischemia results in an ischemic core surrounded by the peri-infarct region (penumbra). Most research attention has been focused on penumbra while the pattern of cell fates inside the ischemic core is poorly defined. In the present investigation, we tested the hypothesis that, inside the ischemic core, some neuronal and vascular cells could survive the initial ischemic insult while regenerative niches might exist many days after stroke in the adult brain. Adult mice were subjected to focal cerebral ischemia induced by permanent occlusion of distal branches of the middle cerebral artery (MCA) plus transient ligations of bilateral common carotid artery (CCA). The ischemic insult uniformly reduced the local cerebral blood flow (LCBF) by 90%. Massive cell death occurred due to multiple mechanisms and a significant infarction was cultivated in the ischemic cortex 24 h later. Nevertheless, normal or even higher levels of brain-derived neurotrophic factor (BDNF) and vascular endothelial growth factor (VEGF) persistently remained in the core tissue, some NeuN-positive and Glut-1/College IV-positive cells with intact ultrastructural features resided in the core 7-14 days post stroke. BrdU-positive but TUNEL-negative neuronal and endothelial cells were detected in the core where extensive extracellular matrix infrastructure developed. Meanwhile, GFAP-positive astrocytes accumulated in the penumbra and Iba-1-positive microglial/macrophages invaded the core several days after stroke. The long term survival of neuronal and vascular cells inside the ischemic core was also seen after a severe ischemic stroke induced by permanent embolic occlusion of the MCA. We demonstrate that a therapeutic intervention of pharmacological hypothermia could save neurons/endothelial cells inside the core. These data suggest that the ischemic core is an actively regulated brain region with residual and newly formed viable neuronal and vascular cells acutely and chronically after at

  9. Iron in Post-Perovskite with Implications for the Core-Mantle Boundary Region

    NASA Astrophysics Data System (ADS)

    McCammon, C. A.; Caracas, R.

    2016-12-01

    Regions of heterogeneity in the core-mantle boundary region have long been a focus of interest. Most hypotheses to explain these seismic heterogeneities are based on comparison of seismic data with experimental and computational mineral physics studies of the relevant phases. Shear wave velocities are particularly important, and nuclear inelastic scattering offers the attractive possibility to measure these velocities for iron-containing minerals in the laser-heated diamond anvil cell through direct measurement of the partial density of states. Complementary determination of the partial density of states using density functional theory has shown the potential to identify experimental features that impact the velocity determination as demonstrated in a recent parallel study on bridgmanite. In this work we combine density functional theory calculations of iron-bearing post-perovskite with experimental nuclear inelastic data for ferropericlase and post-perovskite from the literature to assess the influence of iron on shear wave velocities and derive a compositional model for structures in the core-mantle boundary region.

  10. Region with trapped surfaces in spherical symmetry, its core, and their boundaries

    SciTech Connect

    Bengtsson, Ingemar; Senovilla, Jose M. M.

    2011-02-15

    We consider the region T in spacetime containing future-trapped closed surfaces and its boundary B, and derive some of their general properties. We then concentrate on the case of spherical symmetry, but the methods we use are general and applicable to other situations. We argue that closed trapped surfaces have a nonlocal property, ''clairvoyance'', which is inherited by B. We prove that B is not a marginally trapped tube in general, and that it can have portions in regions whose whole past is flat. For asymptotically flat black holes, we identify a general past barrier, well inside the event horizon, to the location of B under physically reasonable conditions. We also define the core Z of the trapped region as that part of T which is indispensable to sustain closed trapped surfaces. We prove that the unique spherically symmetric dynamical horizon is the boundary of such a core, and we argue that this may serve to single it out. To illustrate the results, some explicit examples are discussed, namely, Robertson-Walker geometries and the imploding Vaidya spacetime.

  11. Solar Eruptions Initiated in Sigmoidal Active Regions

    NASA Astrophysics Data System (ADS)

    Savcheva, Antonia

    2016-07-01

    active regions that have been shown to possess high probability for eruption. They present a direct evidence of the existence of flux ropes in the corona prior to the impulsive phase of eruptions. In order to gain insight into their eruptive behavior and how they get destabilized we need to know their 3D magnetic field structure. First, we review some recent observations and modeling of sigmoidal active regions as the primary hosts of solar eruptions, which can also be used as useful laboratories for studying these phenomena. Then, we concentrate on the analysis of observations and highly data-constrained non-linear force-free field (NLFFF) models over the lifetime of several sigmoidal active regions, where we have captured their magnetic field structure around the times of major flares. We present the topology analysis of a couple of sigmoidal regions pointing us to the probable sites of reconnection. A scenario for eruption is put forward by this analysis. We demonstrate the use of this topology analysis to reconcile the observed eruption features with the standard flare model. Finally, we show a glimpse of how such a NLFFF model of an erupting region can be used to initiate a CME in a global MHD code in an unprecedented realistic manner. Such simulations can show the effects of solar transients on the near-Earth environment and solar system space weather.

  12. Who Can You Turn to? Tie Activation within Core Business Discussion Networks

    ERIC Educational Resources Information Center

    Renzulli, Linda A.; Aldrich, Howard

    2005-01-01

    We examine the connection between personal network characteristics and the activation of ties for access to resources during routine times. We focus on factors affecting business owners' use of their core network ties to obtain legal, loan, financial and expert advice. Owners rely more on core business ties when their core networks contain a high…

  13. Who Can You Turn to? Tie Activation within Core Business Discussion Networks

    ERIC Educational Resources Information Center

    Renzulli, Linda A.; Aldrich, Howard

    2005-01-01

    We examine the connection between personal network characteristics and the activation of ties for access to resources during routine times. We focus on factors affecting business owners' use of their core network ties to obtain legal, loan, financial and expert advice. Owners rely more on core business ties when their core networks contain a high…

  14. Predicting Activation of Experiments Inside the Annular Core Research Reactor

    SciTech Connect

    Greenberg, Joseph Isaac

    2015-11-01

    The objective of this thesis is to create a program to quickly estimate the radioactivity and decay of experiments conducted inside of the Annular Core Research Reactor at Sandia National Laboratories and eliminate the need for users to write code. This is achieved by model the neutron fluxes in the reactor’s central cavity where experiments are conducted for 4 different neutron spectra using MCNP. The desired neutron spectrum, experiment material composition, and reactor power level are then input into CINDER2008 burnup code to obtain activation and decay information for every isotope generated. DREAD creates all of the files required for CINDER2008 through user selected inputs in a graphical user interface and executes the program for the user and displays the resulting estimation for dose rate at various distances. The DREAD program was validated by weighing and measuring various experiments in the different spectra and then collecting dose rate information after they were irradiated and comparing it to the dose rates that DREAD predicted. The program provides results with an average of 17% higher estimates than the actual values and takes seconds to execute.

  15. Doppler Shifts in Active Region Moss Using SOHO/SUMER

    NASA Astrophysics Data System (ADS)

    Winebarger, Amy; Tripathi, Durgesh; Mason, Helen E.; Del Zanna, Giulio

    2013-04-01

    The velocity of the plasma at the footpoint of hot loops in active region cores can be used to discriminate between different heating frequencies. Velocities on the order of a few kilometers per second would indicate low-frequency heating on sub-resolution strands, while velocities close to zero would indicate high-frequency (steady) heating. To discriminate between these two values requires accurate velocity measurements; previous velocity measurements suffer from large uncertainties, mainly due to the lack of an absolute wavelength reference scale. In this paper, we determine the velocity in the loop footpoints using observations from Solar Ultraviolet Measurements of Emitted Radiation (SUMER) on Solar and Heliospheric Observatory. We use neutral spectral lines to determine the wavelength scale of the observations with an uncertainty in the absolute velocity of <3.5 km s-1 and co-aligned Transition Region and Coronal Explorer (TRACE) images to identify footpoint regions. We studied three different active regions and found average redshifts in the Ne VIII 770 Å emission line (formed at 6 × 105 K) of 5.17 ± 5.37 km s-1 and average redshifts in the C IV 1548 and 1550 Å emission lines (formed at 1 × 105 K) of 13.94 ± 4.93 km s-1 and 14.91 ± 6.09 km s-1, respectively. We find no correlation between the brightness in the spectral line and the measured velocity, nor do we find correlation between the Ne VIII and C IV velocities measured co-spatially and co-temporally. SUMER scanned two of the active regions twice; in those active regions we find positive correlation between the co-spatial velocities measured during the first and second scans. These results provide definitive and quantitative measurements for comparisons with simulations of different coronal heating mechanisms.

  16. Computational Design of Strain in Core-Shell Nanoparticles for Optimizing Catalytic Activity.

    PubMed

    Moseley, Philip; Curtin, W A

    2015-06-10

    Surface strains in core-shell nanoparticles modify catalytic activity. Here, a continuum-based strategy enables accurate surface-strain-based screening and design of core-shell systems using minimal input as a means to enhance catalytic activity. The approach is validated here for Pt shells on Cu(x)Pt(1-x) cores and used to interpret experimental results on the oxygen reduction reaction in the same system. The analysis shows that precise control of particle sizes and shell thicknesses is required to achieve peak activity, rationalizing the limited increases in activity observed in experiments. The method is also applied to core-shell nanorods to demonstrate its wide applicability.

  17. Ice core evidence for significant 100-year regional warming on the Antarctic Peninsula

    NASA Astrophysics Data System (ADS)

    Thomas, E. R.; Dennis, P. F.; Bracegirdle, T. J.; Franzke, C.

    2009-10-01

    We present a new 150-year, high-resolution, stable isotope record (δ 18O) from the Gomez ice core, drilled on the data sparse south western Antarctic Peninsula, revealing a ˜2.7°C rise in surface temperatures since the 1950s. The record is highly correlated with satellite-derived temperature reconstructions and instrumental records from Faraday station on the north west coast, thus making it a robust proxy for local and regional temperatures since the 1850s. We conclude that the exceptional 50-year warming, previously only observed in the northern Peninsula, is not just a local phenomena but part of a statistically significant 100-year regional warming trend that began around 1900. A suite of coupled climate models are employed to demonstrate that the 50 and 100 year temperature trends are outside of the expected range of variability from pre-industrial control runs, indicating that the warming is likely the result of external climate forcing.

  18. Characterization of the basal core promoter and precore regions in anti-HBe-positive inactive carriers of hepatitis B virus.

    PubMed

    Ledesma, María Mora González López; Galdame, Omar; Bouzas, Belén; Tadey, Luciana; Livellara, Beatriz; Giuliano, Silvina; Viaut, Marcela; Paz, Silvia; Fainboim, Hugo; Gadano, Adrian; Campos, Rodolfo; Flichman, Diego

    2011-05-01

    The study of hepatitis B virus (HBV) genomic heterogeneity has become a major issue in investigations aimed at understanding the relationship between HBV mutants and the wide spectrum of clinical and pathological conditions associated with HBV infection. Although most chronically infected HBV patients are inactive carriers, several virological aspects of this state remain unclear. In order to determine the prevalence and clinical significance of mutations in the basal core promoter (BCP) and precore (pC) regions among inactive carriers, the nucleotide sequences from 41 inactive carriers were analyzed and compared with those from 29 individuals with chronic active hepatitis. Genotypes A (24.3%), D (37.1%), F1b (12.9%), and F4 (18.6%) were the most prevalent. Mutations in the BCP/pC regions were observed in most of the inactive carriers (92.7%) and in most of the patients with chronic active hepatitis (93.1%). The prevalence of mutation 1764(A) was significantly higher in patients with chronic active hepatitis (65.5%) than in inactive carriers (36.6%) (p=0.038), whereas the prevalences of mutations at the other positions analyzed were not significantly different. Older patients (>50 years) showed BCP/pC patterns with a higher number of substitutions. Mutations were found to be biased by genotype: the 1896(A) mutation was highly prevalent in genotypes D and F4, while alternative substitutions in the pC region were more prevalent in genotypes A and F1b. Mutations in the BCP/pC regions are the hallmark of chronic anti-HBe-positive individuals; nevertheless, the even distribution of mutations in active and inactive carriers suggests that BCP/pC mutations may occur during HBV infection not strictly related to the HBV infection activity. Copyright © 2011. Published by Elsevier Ltd.

  19. Magnetic helicity in emerging solar active regions

    SciTech Connect

    Liu, Y.; Hoeksema, J. T.; Bobra, M.; Hayashi, K.; Sun, X.; Schuck, P. W.

    2014-04-10

    Using vector magnetic field data from the Helioseismic and Magnetic Imager instrument aboard the Solar Dynamics Observatory, we study magnetic helicity injection into the corona in emerging active regions (ARs) and examine the hemispheric helicity rule. In every region studied, photospheric shearing motion contributes most of the helicity accumulated in the corona. In a sample of 28 emerging ARs, 17 follow the hemisphere rule (61% ± 18% at a 95% confidence interval). Magnetic helicity and twist in 25 ARs (89% ± 11%) have the same sign. The maximum magnetic twist, which depends on the size of an AR, is inferred in a sample of 23 emerging ARs with a bipolar magnetic field configuration.

  20. Silicon on insulator with active buried regions

    DOEpatents

    McCarthy, Anthony M.

    1996-01-01

    A method for forming patterned buried components, such as collectors, sources and drains, in silicon-on-insulator (SOI) devices. The method is carried out by epitaxially growing a suitable sequence of single or multiple etch stop layers ending with a thin silicon layer on a silicon substrate, masking the silicon such that the desired pattern is exposed, introducing dopant and activating in the thin silicon layer to form doped regions. Then, bonding the silicon layer to an insulator substrate, and removing the silicon substrate. The method additionally involves forming electrical contact regions in the thin silicon layer for the buried collectors.

  1. Silicon on insulator with active buried regions

    DOEpatents

    McCarthy, Anthony M.

    1998-06-02

    A method for forming patterned buried components, such as collectors, sources and drains, in silicon-on-insulator (SOI) devices. The method is carried out by epitaxially growing a suitable sequence of single or multiple etch stop layers ending with a thin silicon layer on a silicon substrate, masking the silicon such that the desired pattern is exposed, introducing dopant and activating in the thin silicon layer to form doped regions. Then, bonding the silicon layer to an insulator substrate, and removing the silicon substrate. The method additionally involves forming electrical contact regions in the thin silicon layer for the buried collectors.

  2. Silicon on insulator with active buried regions

    DOEpatents

    McCarthy, A.M.

    1996-01-30

    A method is disclosed for forming patterned buried components, such as collectors, sources and drains, in silicon-on-insulator (SOI) devices. The method is carried out by epitaxially growing a suitable sequence of single or multiple etch stop layers ending with a thin silicon layer on a silicon substrate, masking the silicon such that the desired pattern is exposed, introducing dopant and activating in the thin silicon layer to form doped regions. Then, bonding the silicon layer to an insulator substrate, and removing the silicon substrate. The method additionally involves forming electrical contact regions in the thin silicon layer for the buried collectors. 10 figs.

  3. Silicon on insulator with active buried regions

    DOEpatents

    McCarthy, A.M.

    1998-06-02

    A method is disclosed for forming patterned buried components, such as collectors, sources and drains, in silicon-on-insulator (SOI) devices. The method is carried out by epitaxially growing a suitable sequence of single or multiple etch stop layers ending with a thin silicon layer on a silicon substrate, masking the silicon such that the desired pattern is exposed, introducing dopant and activating in the thin silicon layer to form doped regions. Then, bonding the silicon layer to an insulator substrate, and removing the silicon substrate. The method additionally involves forming electrical contact regions in the thin silicon layer for the buried collectors. 10 figs.

  4. Active region evolution in the chromosphere and transtition region

    NASA Technical Reports Server (NTRS)

    Shine, R. A.; Schrijver, C. J.

    1988-01-01

    Images in the C IV 1548 A and the Si II 1526 S lines taken with the ultraviolet spectrometer polarimeter (UVSP) instrument on board the Solar Maximum Mission (SMM) satellite were combined into movies showing the evolution of active regions and the neighboring supergranulation over several days. The data sets generally consist of 240 by 240 arc second rasters with 3 arc second pixels taken one per orbit (about every 90 minutes). The images are projected on a latitude/longitude grid to remove the forshortening as the region rotates across the solar disk and further processed to remove jitter and gain variations. Movies were made with and without differential rotation. Although there are occasional missing orbits, these series do not suffer from the long nighttime gaps that occur in observations taken at a single groundbased observatory and are excellent for studying changes on time scales of several hours. The longest sequence processed to date runs from 20 Oct. 1980 to 25 Oct. 1980. This was taken during an SMM flare buildup study on AR 2744. Several shorter sequences taken in 1980 and 1984 will also be shown. The results will be presented on a video disk which can be interactively controlled to view the movies.

  5. Acoustic Oscillation Properties of Active Region 12193

    NASA Astrophysics Data System (ADS)

    Monsue, Teresa; Pesnell, William D.; Hill, Frank

    2017-08-01

    Solar flares are dynamic objects occurring randomly and yet unannounced in nature. In order to find an efficient detection method, we require a greater breadth of knowledge of the system. One path to such a method is to observe the solar atmosphere in a region around a flare in different wavelengths of light and acoustic frequency bands. This provides information from different altitudes in the solar atmosphere and allows us to study the temporal evolution of each altitude through the flaring event. A more complete understanding of the time evolution may lead to yet undiscovered precursors of the flare. In this project, we study Active Region 12192 using acoustic observations near an X3 flare occurring on October 24, 2014 at 21:41UT. Our wavelet analysis utilizes time series data to create Fourier power spectra of individual pixels spatially resolved around the flare region, to study the frequency bands. In order to study the power distribution in regions around the flare and to search for any correlation we apply several methods. One method we partition sub-regions in our main flaring region and take a survey of the oscillations for each frequency band within power maps. Another method we average the FFT to take measurements within the p-modes (2-4 mHz) and chromospheric (4-6 mHz) frequencies. The application of these methods should be able to get us closer to tracking waveforms within power maps.

  6. Analysis on fuel breeding capability of FBR core region based on minor actinide recycling doping

    NASA Astrophysics Data System (ADS)

    Permana, Sidik; Novitrian, Waris, Abdul; Ismail, Suzuki, Mitsutoshi; Saito, Masaki

    2014-09-01

    Nuclear fuel breeding based on the capability of fuel conversion capability can be achieved by convertion rasio of some fertile materials into fissile materials during nuclear reaction processes such as main fissile materials of U-233, U-235, Pu-239 and Pu-241 and for fertile materials of Th-232, U-238, and Pu-240 as well as Pu-238. Minor actinide (MA) loading option which consists of neptunium, americium and curium will gives some additional contribution from converted MA into plutonium such as conversion Np-237 into Pu-238 and it's produced Pu-238 converts to Pu-239 via neutron capture. Increasing composition of Pu-238 can be used to produce fissile material of Pu-239 as additional contribution. Trans-uranium (TRU) fuel (Mixed fuel loading of MOX (U-Pu) and MA composition) and mixed oxide (MOX) fuel compositions are analyzed for comparative analysis in order to show the effect of MA to the plutonium productions in core in term of reactor criticality condition and fuel breeding capability. In the present study, neptunium (Np) nuclide is used as a representative of MAin trans-uranium (TRU) fuel composition as Np-MOX fuel type. It was loaded into the core region gives significant contribution to reduce the excess reactivity in comparing to mixed oxide (MOX) fuel and in the same time it contributes to increase nuclear fuel breeding capability of the reactor. Neptunium fuel loding scheme in FBR core region gives significant production of Pu-238 as fertile material to absorp neutrons for reducing excess reactivity and additional contribution for fuel breeding.

  7. Analysis on fuel breeding capability of FBR core region based on minor actinide recycling doping

    SciTech Connect

    Permana, Sidik; Novitrian,; Waris, Abdul; Ismail; Suzuki, Mitsutoshi; Saito, Masaki

    2014-09-30

    Nuclear fuel breeding based on the capability of fuel conversion capability can be achieved by conversion ratio of some fertile materials into fissile materials during nuclear reaction processes such as main fissile materials of U-233, U-235, Pu-239 and Pu-241 and for fertile materials of Th-232, U-238, and Pu-240 as well as Pu-238. Minor actinide (MA) loading option which consists of neptunium, americium and curium will gives some additional contribution from converted MA into plutonium such as conversion Np-237 into Pu-238 and it's produced Pu-238 converts to Pu-239 via neutron capture. Increasing composition of Pu-238 can be used to produce fissile material of Pu-239 as additional contribution. Trans-uranium (TRU) fuel (Mixed fuel loading of MOX (U-Pu) and MA composition) and mixed oxide (MOX) fuel compositions are analyzed for comparative analysis in order to show the effect of MA to the plutonium productions in core in term of reactor criticality condition and fuel breeding capability. In the present study, neptunium (Np) nuclide is used as a representative of MAin trans-uranium (TRU) fuel composition as Np-MOX fuel type. It was loaded into the core region gives significant contribution to reduce the excess reactivity in comparing to mixed oxide (MOX) fuel and in the same time it contributes to increase nuclear fuel breeding capability of the reactor. Neptunium fuel loading scheme in FBR core region gives significant production of Pu-238 as fertile material to absorp neutrons for reducing excess reactivity and additional contribution for fuel breeding.

  8. CHEMICAL SEGREGATION TOWARD MASSIVE HOT CORES: THE AFGL2591 STAR-FORMING REGION

    SciTech Connect

    Jimenez-Serra, I.; Zhang, Q.; Viti, S.; Martin-Pintado, J.; De Wit, W.-J. E-mail: qzhang@cfa.harvard.edu E-mail: jmartin@cab.inta-csic.es

    2012-07-01

    We present high angular resolution observations (0.''5 Multiplication-Sign 0.''3) carried out with the Submillimeter Array (SMA) toward the AFGL2591 high-mass star-forming region. Our SMA images reveal a clear chemical segregation within the AFGL2591 VLA 3 hot core, where different molecular species (Types I, II, and III) appear distributed in three concentric shells. This is the first time that such a chemical segregation is ever reported at linear scales {<=}3000 AU within a hot core. While Type I species (H{sub 2}S and {sup 13}CS) peak at the AFGL2591 VLA 3 protostar, Type II molecules (HC{sub 3}N, OCS, SO, and SO{sub 2}) show a double-peaked structure circumventing the continuum peak. Type III species, represented by CH{sub 3}OH, form a ring-like structure surrounding the continuum emission. The excitation temperatures of SO{sub 2}, HC{sub 3}N, and CH{sub 3}OH (185 {+-} 11 K, 150 {+-} 20 K, and 124 {+-} 12 K, respectively) show a temperature gradient within the AFGL2591 VLA 3 envelope, consistent with previous observations and modeling of the source. By combining the H{sub 2}S, SO{sub 2}, and CH{sub 3}OH images, representative of the three concentric shells, we find that the global kinematics of the molecular gas follow Keplerian-like rotation around a 40 M{sub Sun} star. The chemical segregation observed toward AFGL2591 VLA 3 is explained by the combination of molecular UV photodissociation and a high-temperature ({approx}1000 K) gas-phase chemistry within the low extinction innermost region in the AFGL2591 VLA 3 hot core.

  9. The Limit of Magnetic-Shear Energy in Solar Active Regions

    NASA Technical Reports Server (NTRS)

    Moore, Ronald; Falconer, David; Sterling, Alphonse

    2012-01-01

    It has been found previously, by measuring from active-region magnetograms a proxy of the free energy in the active region's magnetic field, (1) that there is a sharp upper limit to the free energy the field can hold that increases with the amount of magnetic field in the active region, the active region's magnetic flux content, and (2) that most active regions are near this limit when their field explodes in a coronal mass ejection/flare eruption. That is, explosive active regions are concentrated in a main-sequence path bordering the free-energy-limit line in (flux content, free-energy proxy) phase space. Here, we present evidence that specifies the underlying magnetic condition that gives rise to the free-energy limit and the accompanying main sequence of explosive active regions. Using a suitable free-energy proxy measured from vector magnetograms of 44 active regions, we find evidence that (1) in active regions at and near their free-energy limit, the ratio of magnetic-shear free energy to the non-free magnetic energy the potential field would have is of the order of one in the core field, the field rooted along the neutral line, and (2) this ratio is progressively less in active regions progressively farther below their free-energy limit. Evidently, most active regions in which this core-field energy ratio is much less than one cannot be triggered to explode; as this ratio approaches one, most active regions become capable of exploding; and when this ratio is one, most active regions are compelled to explode.

  10. The Limit of Magnetic-Shear Energy in Solar Active Regions

    NASA Technical Reports Server (NTRS)

    Moore, Ronald L.; Falconer, David A.; Sterling, Alphonse C.

    2013-01-01

    It has been found previously, by measuring from active ]region magnetograms a proxy of the free energy in the active region fs magnetic field, (1) that there is a sharp upper limit to the free energy the field can hold that increases with the amount of magnetic field in the active region, the active region fs magnetic flux content, and (2) that most active regions are near this limit when their field explodes in a CME/flare eruption. That is, explosive active regions are concentrated in a main ]sequence path bordering the free ]energy ]limit line in (flux content, free ]energy proxy) phase space. Here we present evidence that specifies the underlying magnetic condition that gives rise to the free ]energy limit and the accompanying main sequence of explosive active regions. Using a suitable free energy proxy measured from vector magnetograms of 44 active regions, we find evidence that (1) in active regions at and near their free ]energy limit, the ratio of magnetic ]shear free energy to the non ]free magnetic energy the potential field would have is of order 1 in the core field, the field rooted along the neutral line, and (2) this ratio is progressively less in active regions progressively farther below their free ]energy limit. Evidently, most active regions in which this core ]field energy ratio is much less than 1 cannot be triggered to explode; as this ratio approaches 1, most active regions become capable of exploding; and when this ratio is 1, most active regions are compelled to explode.

  11. The Limit of Magnetic-Shear Energy in Solar Active Regions

    NASA Technical Reports Server (NTRS)

    Moore, Ronald; Falconer, David; Sterling, Alphonse

    2012-01-01

    It has been found previously, by measuring from active-region magnetograms a proxy of the free energy in the active region's magnetic field, (1) that there is a sharp upper limit to the free energy the field can hold that increases with the amount of magnetic field in the active region, the active region's magnetic flux content, and (2) that most active regions are near this limit when their field explodes in a coronal mass ejection/flare eruption. That is, explosive active regions are concentrated in a main-sequence path bordering the free-energy-limit line in (flux content, free-energy proxy) phase space. Here, we present evidence that specifies the underlying magnetic condition that gives rise to the free-energy limit and the accompanying main sequence of explosive active regions. Using a suitable free-energy proxy measured from vector magnetograms of 44 active regions, we find evidence that (1) in active regions at and near their free-energy limit, the ratio of magnetic-shear free energy to the non-free magnetic energy the potential field would have is of the order of one in the core field, the field rooted along the neutral line, and (2) this ratio is progressively less in active regions progressively farther below their free-energy limit. Evidently, most active regions in which this core-field energy ratio is much less than one cannot be triggered to explode; as this ratio approaches one, most active regions become capable of exploding; and when this ratio is one, most active regions are compelled to explode.

  12. Studies of meiosis disclose distinct roles of cohesion in the core centromere and pericentromeric regions.

    PubMed

    Sakuno, Takeshi; Watanabe, Yoshinori

    2009-01-01

    During meiosis, a single round of genome duplication is followed by two sequential rounds of chromosome segregation. Through this process, a diploid parent cell generates gametes with a haploid set of chromosomes. A characteristic of meiotic chromosome segregation is a stepwise loss of sister chromatid cohesion along chromosomal arms and at centromeres. Whereas arm cohesion plays an important role in ensuring homologue disjunction at meiosis I, persisting cohesion at pericentromeric regions throughout meiosis I is essential for the faithful equational segregation of sisters in the following meiosis II, similar to mitosis. A widely conserved pericentromeric protein called shugoshin, which associates with protein phosphatase 2A (PP2A), plays a critical role in this protection of cohesin. Another key aspect of meiosis I is the establishment of monopolar attachment of sister kinetochores to spindle microtubules. Cohesion or physical linkage at the core centromeres, where kinetochores assemble, may conjoin sister kinetochores, leading to monopolar attachment. A meiosis-specific kinetochore factor such as fission yeast Moa1 or budding yeast monopolin contributes to this regulation. We propose that cohesion at the core centromere and pericentromeric regions plays distinct roles, especially in defining the orientation of kinetochores.

  13. Supergranule Diffusion and Active Region Decay

    NASA Technical Reports Server (NTRS)

    Hathaway, David H.; Choudhary, Debi Prasad

    2004-01-01

    Models of the Sun's magnetic dynamo include turbulent diffusion to parameterize the effects of convective motions on the evolution of the Sun's magnetic field. Supergranules are known to dominate the evolution of the surface magnetic field structure as evidenced by the structure of both the active and quiet magnetic network. However, estimates for the dif hivity attributed to su perymules differ by an order of magnitude from about 100 km sup2/s to more than 1000 km sup2/s. We examine this question of the e i v i t y using three merent approaches. 1) We study the decay of more than 30,000 active regions by determining the rate of change in the sunspot area of each active region from day-to-day. 2) We study the decay of a single isolated active region near the time of solar minimum by examining the magnetic field evolution over five solar rotations fiom SOHOMDI magnetograms obtained at 96-minute intervals. 3) We study the characteristics of supergranules that influence the estimates of their diffusive properties - flow speeds and lifetimes as functions of size - fiom SOHO/MDI Dopplergrams.

  14. Supergranule Diffusion and Active Region Decay

    NASA Technical Reports Server (NTRS)

    Hathaway, David H.; Choudhary, Debi Prasad

    2004-01-01

    Models of the Sun's magnetic dynamo include turbulent diffusion to parameterize the effects of convective motions on the evolution of the Sun's magnetic field. Supergranules are known to dominate the evolution of the surface magnetic field structure as evidenced by the structure of both the active and quiet magnetic network. However, estimates for the dif hivity attributed to su perymules differ by an order of magnitude from about 100 km sup2/s to more than 1000 km sup2/s. We examine this question of the e i v i t y using three merent approaches. 1) We study the decay of more than 30,000 active regions by determining the rate of change in the sunspot area of each active region from day-to-day. 2) We study the decay of a single isolated active region near the time of solar minimum by examining the magnetic field evolution over five solar rotations fiom SOHOMDI magnetograms obtained at 96-minute intervals. 3) We study the characteristics of supergranules that influence the estimates of their diffusive properties - flow speeds and lifetimes as functions of size - fiom SOHO/MDI Dopplergrams.

  15. A Survey of Nanoflare Properties in Solar Active Regions

    NASA Astrophysics Data System (ADS)

    Viall, N. M.; Klimchuk, J. A.

    2013-12-01

    We investigate coronal heating using a systematic technique to analyze the properties of nanoflares in active regions (AR). Our technique computes cooling times, or time-lags, on a pixel-by-pixel basis using data taken with the Atmospheric Imaging Assembly onboard the Solar Dynamics Observatory. Our technique has the advantage that it allows us to analyze all of the coronal AR emission, including the so-called diffuse emission. We recently presented results using this time-lag analysis on NOAA AR 11082 (Viall & Klimchuk 2012) and found that the majority of the pixels contained cooling plasma along their line of sight, consistent with impulsive coronal nanoflare heating. Additionally, our results showed that the nanoflare energy is stronger in the AR core and weaker in the active region periphery. Are these results representative of the nanoflare properties exhibited in the majority of ARs, or is AR 11082 unique? Here we present the time-lag results for a survey of ARs and show that these nanoflare patterns are born out in other active regions, for a range of ages, magnetic complexity, and total unsigned magnetic flux. Other aspects of the nanoflare properties, however, turn out to be dependent on certain AR characteristics.

  16. Patterns of helicity in solar active regions

    NASA Technical Reports Server (NTRS)

    Pevtsov, Alexei A.; Canfield, Richard C.; Metcalf, Thomas R.

    1994-01-01

    Using 46 vector magnetograms from the Stokes Polarimeter of Mees Solar Observatory (MSO), we studied patterns of local helicity in three diverse solar active regions. From these magnetograms we computed maps of the local helicity parameter alpha = J(sub z)/B(sub z). Although such maps are noisy, we found patterns at the level approximately 2 to 3 sigma(sub J(sub z)), which repeat in successive magnetograms for up to several days. Typically, the alpha maps of any given active region contain identifiable patches with both positive and negative values of alpha. Even within a single sunspot complex, several such alpha patches can often be seen. We followed 68 alpha patches that could be identified on at least two successive alpha maps. We found that the persistence fraction of such patches decrease exponentially, with a characteristic time approximately 27 hr.

  17. Helicity Evolution in Emerging Active Regions

    NASA Astrophysics Data System (ADS)

    Pevtsov, Alexei A.; Maleev, Vasily M.; Longcope, Dana W.

    2003-08-01

    We study the evolution of twist and magnetic helicity in the coronal fields of active regions as they emerge. We use multiday sequences of Solar and Heliospheric Observatory Michelson Doppler Interferometer magnetograms to characterize the region's emergence. We quantify the overall twist in the coronal field, α, by matching a linear force-free field to bright coronal structures in EUV images. At the beginning of emergence, all regions studied have α~=0. As the active region grows, α increases and reaches a plateau within approximately 1 day of emergence. The inferred helicity transport rate is larger than differential rotation could produce. Following the 2000 work of Longcope & Welsch, we develop a model for the injection of helicity into the corona by the emergence of a twisted flux tube. This model predicts a ramp-up period of approximately 1 day. The observed time history α(t) is fitted by this model assuming reasonable values for the subphotospheric Alfvén speed. The implication is that helicity is carried by twisted flux tubes rising from the convection zone and transported across the photosphere by spinning of the poles driven by magnetic torque.

  18. Rice Cellulose SynthaseA8 Plant-Conserved Region Is a Coiled-Coil at the Catalytic Core Entrance

    SciTech Connect

    Rushton, Phillip S.; Olek, Anna T.; Makowski, Lee; Badger, John; Steussy, C. Nicklaus; Carpita, Nicholas C.; Stauffacher, Cynthia V.

    2016-11-22

    The crystallographic structure of a rice (Oryza sativa) cellulose synthase, OsCesA8, plant-conserved region (P-CR), one of two unique domains in the catalytic domain of plant CesAs, was solved to 2.4 Å resolution. Two antiparallel α-helices form a coiled-coil domain linked by a large extended connector loop containing a conserved trio of aromatic residues. The P-CR structure was fit into a molecular envelope for the P-CR domain derived from small-angle X-ray scattering data. The P-CR structure and molecular envelope, combined with a homology-based chain trace of the CesA8 catalytic core, were modeled into a previously determined CesA8 small-angle X-ray scattering molecular envelope to produce a detailed topological model of the CesA8 catalytic domain. The predicted position for the P-CR domain from the molecular docking models places the P-CR connector loop into a hydrophobic pocket of the catalytic core, with the coiled-coil aligned near the entrance of the substrate UDP-glucose into the active site. In this configuration, the P-CR coiled-coil alone is unlikely to regulate substrate access to the active site, but it could interact with other domains of CesA, accessory proteins, or other CesA catalytic domains to control substrate delivery.

  19. Accelerated gravity testing of aquitard core permeability and implications at formation and regional scale

    NASA Astrophysics Data System (ADS)

    Timms, W. A.; Crane, R.; Anderson, D. J.; Bouzalakos, S.; Whelan, M.; McGeeney, D.; Rahman, P. F.; Acworth, R. I.

    2016-01-01

    Evaluating the possibility of leakage through low-permeability geological strata is critically important for sustainable water supplies, the extraction of fuels from coal and other strata, and the confinement of waste within the earth. The current work demonstrates that relatively rapid and realistic vertical hydraulic conductivity (Kv) measurements of aquitard cores using accelerated gravity can constrain and compliment larger-scale assessments of hydraulic connectivity. Steady-state fluid velocity through a low-K porous sample is linearly related to accelerated gravity (g level) in a centrifuge permeameter (CP) unless consolidation or geochemical reactions occur. A CP module was custom designed to fit a standard 2 m diameter geotechnical centrifuge (550 g maximum) with a capacity for sample dimensions up to 100 mm diameter and 200 mm length, and a total stress of ˜ 2 MPa at the base of the core. Formation fluids were used as influent to limit any shrink-swell phenomena, which may alter the permeability. Kv results from CP testing of minimally disturbed cores from three sites within a clayey-silt formation varied from 10-10 to 10-7 m s-1 (number of samples, n = 18). Additional tests were focussed on the Cattle Lane (CL) site, where Kv within the 99 % confidence interval (n = 9) was 1.1 × 10-9 to 2.0 × 10-9 m s-1. These Kv results were very similar to an independent in situ Kv method based on pore pressure propagation though the sequence. However, there was less certainty at two other core sites due to limited and variable Kv data. Blind standard 1 g column tests underestimated Kv compared to CP and in situ Kv data, possibly due to deionised water interactions with clay, and were more time-consuming than CP tests. Our Kv results were compared with the set-up of a flow model for the region, and considered in the context of heterogeneity and preferential flow paths at site and

  20. Magnetic Energy Storage in Coronal Active Regions

    NASA Astrophysics Data System (ADS)

    Wolfson, Richard; Drake, C.; Kennedy, M.

    2011-05-01

    We consider magnetic energy storage in a force-free coronal model that simulates an active region by superposing a strong, localized magnetic bipole on a global background dipole. As we found earlier for dipolar and quadrupolar boundary conditions, our solutions develop detached flux ropes, whose energy can exceed that of the corresponding open field; this excess energy is available to power eruptive events such as coronal mass ejections. Our earlier work, and that of others on related magnetic configurations, has generally yielded excess energies of at most approximately 25 percent of the corresponding potential-field energy. Our new active-region models greatly exceed that value, with stressed force-free fields whose energy excess above the open-field state can be well over 100 percent of the energy stored in the associated potential field. Moving the model active region poleward increases the maximum value of this excess stored energy. This work is funded by NSF grant AGS0940503 to Middlebury College.

  1. Proper Motion Of Emerging Active Regions

    NASA Astrophysics Data System (ADS)

    Tian, Lirong

    2009-05-01

    Observational and modeling results indicate that typically the leading magnetic field of bipolar active regions is often spatially more compact, while more dispersed and fragmented in following polarity. Tian & Alexander (2009, ApJ, 695) studied 15 emerging active regions and find that magnetic helicity flux injected into the corona by the leading polarity is generally several times larger than that injected by the following polarity. They argue that the asymmetry of the magnetic helicity should be responsible for the asymmetry of the magnetic morphology. This argument is supported by two resent model results that magnetic flux tubes with higher degree of twist (and therefor greater magnetic tension) have higher rates of emergence (Murray & Hood 2008, A&A, 479; Cheung et al. 2008, ApJ, 687). These results are consistent because the proper motion (related to the emergence) of the leading polarity was found to be faster than that of the following polarity (van Driel-Gesztelyi & Petrovay 1990, Solar Phys., 126). In this paper, we will reinvestigate the proper motion of leading and following polarities of the emerging active regions, and study possible relationship between the proper motion and magnetic helicity.

  2. Analysis of magnetotelluric profile data from the Ruby Mountains metamorphic core complex and southern Carlin Trend region, Nevada

    USGS Publications Warehouse

    Wannamaker, Philip E.; Doerner, William M.; Stodt, John A.; Sodergen, Timothy L.; Rodriguez, Brian D.

    2002-01-01

    possibly by intrusive heating. The resistive crystalline central massifs adjoin the host stratigraphy across crustal-scale, subvertical fault zones. These zones provide electric current pathways to the lower crust for heterogeneous, upper crustal induced current flow. Resistive core complex crust may be steeply bounded under the middle of the neighboring grabens and not deepen at a shallow angle to arbitrary distances to the west. The numerous crustal breaks imaged with MT may contribute to the low effective elastic thickness estimated regionally for the Great Basin and exemplify the mid-crustal, steeply dipping slip zones in which major earthquakes nucleate. An east-west oriented conductor in the crystalline upper crust spans the East Humboldt Range and northern Ruby Mountains. The conductor may be related to an inferred Archean- Proterozoic suture or nearby graphitic metasediments, with possible alteration by middle Tertiary magmatic activity. Lower crustal resistivity everywhere under the profiles is low and appears quasi one-dimensional. It is consistent with a low rock porosity (<1 vol. %) containing hypersaline brines and possible water-undersaturated crustal melts, residual to the mostly Miocene regional extension. The resistivity expression of the southern Carlin Trend in the Pinon Range is not a simple lineament but rather a family of structures attributed to Eocene intrusion, stratal deformation and graphitization. Substantial reactivation or overprinting by core complex uplift or extensional events seems likely. We concur with others that the Carlin trend may result in part from overlap of the large Eocene Northeast Nevada Volcanic Field with Precambrian- Paleozoic deep-water clastic source rocks thickening abruptly to the west of the Pinon Range, and projections to the north-northwest.

  3. On the association between core-collapse supernovae and H ii regions

    NASA Astrophysics Data System (ADS)

    Crowther, Paul A.

    2013-01-01

    Previous studies of the location of core-collapse supernovae (ccSNe) in their host galaxies have variously claimed an association with H ii regions; no association or an association only with hydrogen-deficient ccSNe. Here, we examine the immediate environments of 39 ccSNe whose positions are well known in nearby (≤15 Mpc), low-inclination (≤65°) hosts using mostly archival, continuum-subtracted Hα ground-based imaging. We find that 11 out of 29 hydrogen-rich ccSNe are spatially associated with H ii regions (38 ± 11 per cent), versus 7 out of 10 hydrogen-poor ccSNe (70 ± 26 per cent). Similar results from Anderson et al. led to an interpretation that the progenitors of Type Ib/c ccSNe are more massive than those of Type II ccSNe. Here, we quantify the luminosities of H ii region either coincident with or nearby to the ccSNe. Characteristic nebulae are long-lived (˜20 Myr) giant H ii regions rather than short-lived (˜4 Myr) isolated, compact H ii regions. Therefore, the absence of an H ii region from most Type II ccSNe merely reflects the longer lifetime of stars with ⪉12 M⊙ than giant H ii regions. Conversely, the association of an H ii region with most Type Ib/c ccSNe is due to the shorter lifetime of stars with >12 M⊙ stars than the duty cycle of giant H ii regions. Therefore, we conclude that the observed association between certain ccSNe and H ii provides only weak constraints upon their progenitor masses. Nevertheless, we do favour lower mass progenitors for two Type Ib/c ccSNe that lack associated nebular emission, a host cluster or a nearby giant H ii region. Finally, we also reconsider the association between long gamma-ray bursts and the peak continuum light from their (mostly) dwarf hosts, and conclude that this is suggestive of very high mass progenitors, in common with previous studies.

  4. Amino acid preservation in saline halite core samples: Analogs for Martian dry evaporitic regions

    NASA Astrophysics Data System (ADS)

    Bada, J.; Aubrey, A.; Lowenstein, T.; Timofeeff, M.

    2008-12-01

    in the deepest core section. This may indicate some recent amino acid contribution to the pool of certain amino acids. Racemization rates can be calculated from the equation: ln[(1+D/L)/(1-D/L)] - ln [(1+D/L)/(1-D/L)]t=0 = 2ki(time) where ki is the first-order rate constant for the interconversion of the enantiomers. Using the D/L ratios at the top of the core for the t = 0 term gives kasp = 3.5x10exp-5 y-1 and 1.3x10exp-5 y-1 for the 18 and 70 ka samples, respectively. For valine, the values are kval = 5.6x10exp-6 y-1 and 7.3x10exp-6 y-1. Extrapolating these values to the average surface temperatures on Mars indicates that the chirality of these amino acids would be preserved for billions of years. Thus, closed basin lacustrine and dry desert valley regions with evaporite-rich deposits are suitable environments in the search for preserved biosignatures on Mars. References [1] Bibring, J.P., et al., Science 307, 1576 (2005) [2] Klinghofer, G., et al., Science 306, 1740 (2004) [3] Osterloo, M.M., et al., Science 319, 1651 (2008) [4] Squyres, S.W., et al., Nature 443, E1 (2006) [5] Lowenstein, T.K., et al., Geology 27, 3 (1999) [6] Glavin, D., et al., Earth Planet. Sci. Lett. 185,1 (2001) [7] Aubrey, A. D., et al., in preparation, Nature Geo. Sci.

  5. Externally Heated Protostellar Cores in the Ophiuchus Star-forming Region

    NASA Astrophysics Data System (ADS)

    Lindberg, Johan E.; Charnley, Steven B.; Jørgensen, Jes K.; Cordiner, Martin A.; Bjerkeli, Per

    2017-01-01

    We present APEX 218 GHz observations of molecular emission in a complete sample of embedded protostars in the Ophiuchus star-forming region. To study the physical properties of the cores, we calculate H2CO and c-C3H2 rotational temperatures, both of which are good tracers of the kinetic temperature of the molecular gas. We find that the H2CO temperatures range between 16 K and 124 K, with the highest H2CO temperatures toward the hot corino source IRAS 16293-2422 (69–124 K) and the sources in the ρ Oph A cloud (23–49 K) located close to the luminous Herbig Be star S1, which externally irradiates the ρ Oph A cores. On the other hand, the c-C3H2 rotational temperature is consistently low (7–17 K) in all sources. Our results indicate that the c-C3H2 emission is primarily tracing more shielded parts of the envelope whereas the H2CO emission (at the angular scale of the APEX beam; 3600 au in Ophiuchus) mainly traces the outer irradiated envelopes, apart from in IRAS 16293-2422, where the hot corino emission dominates. In some sources, a secondary velocity component is also seen, possibly tracing the molecular outflow. Based on observations with the Atacama Pathfinder EXperiment (APEX) telescope. APEX is a collaboration between the Max Planck Institute for Radio Astronomy, the European Southern Observatory, and the Onsala Space Observatory.

  6. Anatomical Society core regional anatomy syllabus for undergraduate medicine: the Delphi process.

    PubMed

    Smith, C F; Finn, G M; Stewart, J; McHanwell, S

    2016-01-01

    A modified Delphi method was employed to seek consensus when revising the UK and Ireland's core syllabus for regional anatomy in undergraduate medicine. A Delphi panel was constructed involving 'expert' (individuals with at least 5 years' experience in teaching medical students anatomy at the level required for graduation). The panel (n = 39) was selected and nominated by members of Council and/or the Education Committee of the Anatomical Society and included a range of specialists including surgeons, radiologists and anatomists. The experts were asked in two stages to 'accept', 'reject' or 'modify' (first stage only) each learning outcome. A third stage, which was not part of the Delphi method, then allowed the original authors of the syllabus to make changes either to correct any anatomical errors or to make minor syntax changes. From the original syllabus of 182 learning outcomes, removing the neuroanatomy component (163), 23 learning outcomes (15%) remained unchanged, seven learning outcomes were removed and two new learning outcomes added. The remaining 133 learning outcomes were modified. All learning outcomes on the new core syllabus achieved over 90% acceptance by the panel.

  7. Externally Heated Protostellar Cores in the Ophiuchus Star-Forming Region

    NASA Technical Reports Server (NTRS)

    Lindberg, Johan E.; Charnley, Steven B.; Jorgensen, Jes K.; Cordiner, Martin A.; Bjerkeli, Per

    2017-01-01

    We present APEX 218 GHz observations of molecular emission in a complete sample of embedded protostars in the Ophiuchus star-forming region. To study the physical properties of the cores, we calculate H2CO and c-C3H2 rotational temperatures, both of which are good tracers of the kinetic temperature of the molecular gas. We find that the H2CO temperatures range between 16K and 124K, with the highest H2CO temperatures toward the hot corino source IRAS 16293-2422 (69-124 K) and the sources in the rho Oph A cloud (23-49 K) located close to the luminous Herbig Be star S1, which externally irradiates the rho Oph A cores. On the other hand, the c-C3H2 rotational temperature is consistently low (7-17 K) in all sources. Our results indicate that the c-C3H2 emission is primarily tracing more shielded parts of the envelope whereas the H2CO emission (at the angular scale of the APEX beam; 3600 au in Ophiuchus) mainly traces the outer irradiated envelopes, apart from in IRAS?16293-2422, where the hot corino emission dominates. In some sources, a secondary velocity component is also seen, possibly tracing the molecular outflow.

  8. Precore/core region mutations of hepatitis B virus related to clinical severity

    PubMed Central

    Kim, Hong; Lee, Seoung-Ae; Do, Seung Yeon; Kim, Bum-Joon

    2016-01-01

    Despite the availability of an effective vaccine, hepatitis B virus (HBV) infection remains a major health problem, with more than 350 million chronically infected people worldwide and over 1 million annual deaths due to cirrhosis and liver cancer. HBV mutations are primarily generated due both to a lack of proofreading capacity by HBV polymerase and to host immune pressure, which is a very important factor for predicting disease progression and therapeutic outcomes. Several types of HBV precore/core (preC/C) mutations have been described to date. The host immune response against T cells drives mutation in the preC/C region. Specifically, preC/C mutations in the MHC class II restricted region are more common than in other regions and are significantly related to hepatocellular carcinoma. Certain mutations, including preC G1896A, are also significantly related to HBeAg-negative chronic infection. This review article mainly focuses on the HBV preC/C mutations that are related to disease severity and on the HBeAg serostatus of chronically infected patients. PMID:27158197

  9. Genomic regions associated with the nitrogen limitation response revealed in a global wheat core collection.

    PubMed

    Bordes, Jacques; Ravel, C; Jaubertie, J P; Duperrier, B; Gardet, O; Heumez, E; Pissavy, A L; Charmet, G; Le Gouis, J; Balfourier, F

    2013-03-01

    Modern wheat (Triticum aestivum L.) varieties in Western Europe have mainly been bred, and selected in conditions where high levels of nitrogen-rich fertilizer are applied. However, high input crop management has greatly increased the risk of nitrates leaching into groundwater with negative impacts on the environment. To investigate wheat nitrogen tolerance characteristics that could be adapted to low input crop management, we supplied 196 accessions of a wheat core collection of old and modern cultivars with high or moderate amounts of nitrogen fertilizer in an experimental network consisting of three sites and 2 years. The main breeding traits were assessed including grain yield and grain protein content. The response to nitrogen level was estimated for grain yield and grain number per m(2) using both the difference and the ratio between performance at the two input levels and the slope of joint regression. A large variability was observed for all the traits studied and the response to nitrogen level. Whole genome association mapping was carried out using 899 molecular markers taking into account the five ancestral group structure of the collection. We identified 54 main regions involving almost all chromosomes that influence yield and its components, plant height, heading date and grain protein concentration. Twenty-three regions, including several genes, spread over 16 chromosomes were involved in the response to nitrogen level. These chromosomal regions may be good candidates to be used in breeding programs to improve the performance of wheat varieties at moderate nitrogen input levels.

  10. Solar irradiance variations due to active regions

    SciTech Connect

    Oster, L.; Schatten, K.H.; Sofia, S.

    1982-05-15

    We have been able to reproduce the variations of the solar irradiance observed by ACRIM to an accuracy of better than +- 0.4 W m/sup -2/, assuming that during the 6 month observation period in 1980 the solar luminosity was constant. The improvement over previous attempts is primarily due to the inclusion of faculae. The reproduction scheme uses simple geometrical data on spot and facula areas, and conventional parameters for the respective fluxes and angular dependencies. The quality of reproduction is not very sensitive to most of the details of these parameters; nevertheless, there conventional parameters cannot be very different from their actual values in the solar atmosphere. It is interesting that the time average of the integrated excess emission (over directions) of the faculae cancels out the integrated deficit produced by the spots, within an accuracy of about 10%. If this behavior were maintained over longer periods of time, say, on the order of an activity cycle, active regions could be viewed as a kind of lighthouse where the energy deficit near the normal direction, associated with the spots, is primarily reemitted close to the tangential directions by the faculae. The currently available data suggest that energy ''storage'' associated with the redirection of flux near active regions on the Sun is comparable to the lifetime of the faculae.

  11. Core promoter specificities of the Sp1 and VP16 transcriptional activation domains.

    PubMed Central

    Emami, K H; Navarre, W W; Smale, S T

    1995-01-01

    The core promoter compositions of mammalian protein-coding genes are highly variable; some contain TATA boxes, some contain initiator (Inr) elements, and others contain both or neither of these basal elements. The underlying reason for this heterogeneity remains a mystery, as recent studies have suggested that TATA-containing and Inr-containing core promoters direct transcription initiation by similar mechanisms and respond similarly to a wide variety of upstream activators. To analyze in greater detail the influence of core promoter structure on transcriptional activation, we compared activation by GAL4-VP16 and Sp1 through synthetic core promoters containing a TATA box, an Inr, or both TATA and Inr. Striking differences were found between the two activators, most notably in the relative strengths of the TATA/Inr and Inr core promoters: the TATA/Inr promoter was much stronger than the Inr promoter when transcription was activated by GAL4-VP16, but the strengths of the two promoters were more comparable when transcription was activated by Sp1. To define the domains of Sp1 responsible for efficient activation through an Inr, several Sp1 deletion mutants were tested as GAL4 fusion proteins. The results reveal that the glutamine-rich activation domains, which previously were found to interact with Drosophila TAF110, preferentially stimulate Inr-containing core promoters. In contrast, efficient activation through TATA appears to require additional domains of Sp1. These results demonstrate that activation domains differ in their abilities to function with specific core promoters, suggesting that the core promoter structure found in a given gene may reflect a preference of the regulators of that gene. Furthermore, the core promoter preference of an activation domain may be related to a specific mechanism of action, which may provide a functional criterion for grouping activation domains into distinct classes. PMID:7565743

  12. HCV core protein induces hepatic lipid accumulation by activating SREBP1 and PPAR{gamma}

    SciTech Connect

    Kim, Kook Hwan; Hong, Sung Pyo; Kim, KyeongJin; Park, Min Jung; Kim, Kwang Jin; Cheong, JaeHun . E-mail: molecule85@pusan.ac.kr

    2007-04-20

    Hepatic steatosis is a common feature in patients with chronic hepatitis C virus (HCV) infection. HCV core protein plays an important role in the development of hepatic steatosis in HCV infection. Because SREBP1 (sterol regulatory element binding protein 1) and PPAR{gamma} (peroxisome proliferators-activated receptor {gamma}) are involved in the regulation of lipid metabolism of hepatocyte, we sought to determine whether HCV core protein may impair the expression and activity of SREBP1 and PPAR{gamma}. In this study, it was demonstrated that HCV core protein increases the gene expression of SREBP1 not only in Chang liver, Huh7, and HepG2 cells transiently transfected with HCV core protein expression plasmid, but also in Chang liver-core stable cells. Furthermore, HCV core protein enhanced the transcriptional activity of SREBP1. In addition, HCV core protein elevated PPAR{gamma} transcriptional activity. However, HCV core protein had no effect on PPAR{gamma} gene expression. Finally, we showed that HCV core protein stimulates the genes expression of lipogenic enzyme and fatty acid uptake associated protein. Therefore, our finding provides a new insight into the mechanism of hepatic steatosis by HCV infection.

  13. Core temperature and heart rate response to repeated bouts of firefighting activities.

    PubMed

    Horn, Gavin P; Blevins, Sue; Fernhall, Bo; Smith, Denise L

    2013-01-01

    During live-fire firefighting operations and training evolutions, firefighters often consume multiple cylinders of air and continue to wear their personal protective equipment even after fire suppression activities have ceased. However, most studies have only reported core temperature changes during short-term firefighting activities and have shown a very modest increase in core temperature. Therefore, the purpose of this study is to evaluate core temperature and heart rate (HR) during repeated bouts of firefighting activity over ∼3 h. The results of this study show that core temperatures increase by an average of 1.9°C--to a larger magnitude than previously reported--and continue to increase during subsequent work cycles (38.4 vs. 38.7) even after long breaks of more than 30 min. The rate of core temperature increase during work continues to increase later in the training exercise (from 0.036 to 0.048°C/min), increasing the risk for exertional heat stress particularly if long-duration firefighting activity is required at these later times. To date, core temperature and HR changes during firefighting have been reported for short-term studies, which may significantly underestimate the physiological burden of typical firefighting activities. Firefighter core temperatures are shown to increase to a larger magnitude than previously observed and the rate of rise in core temperature increases during subsequent firefighting activities.

  14. Observations of an active region filament

    NASA Astrophysics Data System (ADS)

    Zong, W. G.; Tang, Y. H.; Fang, C.; Xu, A. A.

    An active region filament was well observed on September 4, 2002 with THEMIS at the Teide observatory and SOHO/MDI. The full Stokes parameters of the filament were obtained in Hα and FeI 6302 Å lines. Using the data, we have studied the fine structure of the filament and obtained the parameters at the barb endpoints, including intensity, velocity and longitudinal magnetic field. Our results indicate: (a) the Doppler velocities are quiet different at barb endpoints; (b) the longitudinal magnetic fields at the barb endpoints are very weak; (c) there is a strong magnetic field structure under the filament spine.

  15. Solar Coronal Jets in Active Regions

    NASA Astrophysics Data System (ADS)

    Sterling, A. C.; Moore, R. L.; Martinez, F.; Falconer, D. A.

    2016-12-01

    Solar coronal jets are common in both coronal holes and in active regions. Recently, Sterling et al. (2015, Nature 523, 437), using data from Hinode/XRT and SDO/AIA, found that coronal jets originating in polar coronal holes result from the eruption of small-scale filaments (minifilaments). The jet bright point (JBP) seen in X-rays and hotter EUV channels off to one side of the base of the jet's spire develops at the location where the minifilament erupts, consistent with the JBPs being miniature versions of typical solar flares that occur in the wake of large-scale filament eruptions. Here we consider whether active region coronal jets also result from the same minifilament-eruption mechanism, or whether they instead result from a different process, such as emerging flux. Here we present observations of NOAA active region 12259, over 13-20 Jan 2015, using observations from Hinode/XRT, and from SDO/AIA and HMI. We focused on 13 standout jets that we identified from an initial survey of the XRT X-ray images, and we found many more jets in the AIA data set, which have higher cadence and more continuous coverage than our XRT data. All 13 jets originated from identifiable magnetic neutral lines; we further found magnetic flux cancelation to be occurring at essentially all of these neutral lines. At least 6 of those 13 jets were homologous, developing with similar morphology from nearly the same location, and in fact there were many more jets in the homologous sequence apparent in the higher-fidelity AIA data. Each of these homologous jets was consistent with minifilament-like ejections at the start of the jets. Other jets displayed a variety of morphologies, at least some of which were consistent with minifilament eruptions. For other jets however we have not yet clearly deciphered the driving mechanism. Our overall conclusions are similar to those of our earlier study of active region jets (Sterling et al. 2016, ApJ, 821, 100), where we found: some jets clearly to

  16. The evolution of active region loop plasma

    NASA Technical Reports Server (NTRS)

    Krall, K. R.; Antiochos, S. K.

    1980-01-01

    The adjustment of coronal active-region loops to changes in their heating rate is investigated numerically. The one-dimensional hydrodynamic equations are solved subject to boundary conditions in which heat flux-induced mass exchange between coronal and chromospheric components is allowed. The calculated evolution of physical parameters suggests that (1) mass supplied during chromospheric evaporation is much more effective in moderating coronal temperature excursions than when downward heat flux is dissipated by a static chromosphere, and (2) the method by which the chromosphere responds to changing coronal conditions can significantly influence coronal readjustment time scales. Observations are cited which illustrate the range of possible fluctuations in the heating rates.

  17. Determination of the neutron activation profile of core drill samples by gamma-ray spectrometry.

    PubMed

    Gurau, D; Boden, S; Sima, O; Stanga, D

    2017-08-04

    This paper provides guidance for determining the neutron activation profile of core drill samples taken from the biological shield of nuclear reactors using gamma spectrometry measurements. Thus, it provides guidance for selecting a model of the right form to fit data and using least squares methods for model fitting. The activity profiles of two core samples taken from the biological shield of a nuclear reactor were determined. The effective activation depth and the total activity of core samples along with their uncertainties were computed by Monte Carlo simulation. Copyright © 2017 Elsevier Ltd. All rights reserved.

  18. Spatially flat in-phase supermode in multi-core photonic crystal fibers by manipulating refractive of doped region

    NASA Astrophysics Data System (ADS)

    Zhou, Cheng; Zhang, Hai-kun; Song, Peng; Wang, Jing; Li, Xin

    2014-12-01

    One provides a simple recipe, which is manipulating refractive of doped region of the MCPCF, to obtain the equal amplitude distribution of the in-phase supermode for multicores photonic crystal fibers (MCPCFs). Using coupled mode theory and vector finite element method (VFEM), a 7-core PCF is analyzed in detail and the results are applied to 16-,18- and 19-core PCFs, which will find important applications in high-power MCPCF lasers and amplifiers. One shows that it is possible to construct uniformly distributed modes for the nontrivial examples of 7- 16-, 18- and 19-core PCFs. One demonstrates that an equal amplitude distribution of in-phase supermode can be achieved by manipulating refractive of doped region in cores area. This research would provide a theoretical basis for investigating equal amplitude in-phase supermode in the MCPCF.

  19. Selective Cation Exchange in the Core Region of Cu2–xSe/Cu2–xS Core/Shell Nanocrystals

    PubMed Central

    2015-01-01

    We studied cation exchange (CE) in core/shell Cu2–xSe/Cu2–xS nanorods with two cations, Ag+ and Hg2+, which are known to induce rapid exchange within metal chalcogenide nanocrystals (NCs) at room temperature. At the initial stage of the reaction, the guest ions diffused through the Cu2–xS shell and reached the Cu2–xSe core, replacing first Cu+ ions within the latter region. These experiments prove that CE in copper chalcogenide NCs is facilitated by the high diffusivity of guest cations in the lattice, such that they can probe the whole host structure and identify the preferred regions where to initiate the exchange. For both guest ions, CE is thermodynamically driven as it aims for the formation of the chalcogen phase characterized by the lower solubility under the specific reaction conditions. PMID:26360611

  20. Differences in neurogenesis differentiate between core and shell regions of auditory nuclei in the turtle (Pelodiscus sinensis): evolutionary implications.

    PubMed

    Zeng, Shao-Ju; Xi, Chao; Zhang, Xin-Wen; Zuo, Ming-Xue

    2007-01-01

    There is a clear core-versus-shell distinction in cytoarchitecture, electrophysiological properties and neural connections in the mesencephalic and diencephalic auditory nuclei of amniotes. Determining whether the embryogenesis of auditory nuclei shows a similar organization is helpful for further understanding the constituent organization and evolution of auditory nuclei. Therefore in the present study, we injected [(3)H]-thymidine into turtle embryos (Pelodiscus sinensis) at various stages of development. Upon hatching, [(3)H]-thymidine labeling was examined in both the core and shell auditory regions in the midbrain, diencephalon and dorsal ventricular ridge. Met-enkephalin and substance P immunohistochemistry was used to distinguish the core and shell regions. In the mesencephalic auditory nucleus, the occurrence of heavily labeled neurons in the nucleus centralis of the torus semicircularis reached its peak at embryonic day 9, one day later than the surrounding shell. In the diencephalic auditory nucleus, the production of heavily labeled neurons in the central region of the reuniens (Re) was highest at embryonic day (E) 8, one day later than that in the shell region of reuniens. In the region of the dorsal ventricular ridge that received inputs from the central region of Re, the appearance of heavily labeled neurons also reached a peak one day later than that in the area receiving inputs from the shell region of reuniens. Thus, there is a core-versus-shell organization of neuronal generation in reptilian auditory areas. Copyright (c) 2007 S. Karger AG, Basel.

  1. Removing Cool Cores and Central Metallicity Peaks in Galaxy Clusters with Powerful Active Galactic Nucleus Outbursts

    NASA Astrophysics Data System (ADS)

    Guo, Fulai; Mathews, William G.

    2010-07-01

    Recent X-ray observations of galaxy clusters suggest that cluster populations are bimodally distributed according to central gas entropy and are separated into two distinct classes: cool core (CC) and non-cool core (NCC) clusters. While it is widely accepted that active galactic nucleus (AGN) feedback plays a key role in offsetting radiative losses and maintaining many clusters in the CC state, the origin of NCC clusters is much less clear. At the same time, a handful of extremely powerful AGN outbursts have recently been detected in clusters, with a total energy ~1061-1062 erg. Using two-dimensional hydrodynamic simulations, we show that if a large fraction of this energy is deposited near the centers of CC clusters, which is likely common due to dense cores, these AGN outbursts can completely remove CCs, transforming them to NCC clusters. Our model also has interesting implications for cluster abundance profiles, which usually show a central peak in CC systems. Our calculations indicate that during the CC to NCC transformation, AGN outbursts efficiently mix metals in cluster central regions and may even remove central abundance peaks if they are not broad enough. For CC clusters with broad central abundance peaks, AGN outbursts decrease peak abundances, but cannot effectively destroy the peaks. Our model may simultaneously explain the contradictory (possibly bimodal) results of abundance profiles in NCC clusters, some of which are nearly flat, while others have strong central peaks similar to those in CC clusters. A statistical analysis of the sizes of central abundance peaks and their redshift evolution may shed interesting insights on the origin of both types of NCC clusters and the evolution history of thermodynamics and AGN activity in clusters.

  2. REMOVING COOL CORES AND CENTRAL METALLICITY PEAKS IN GALAXY CLUSTERS WITH POWERFUL ACTIVE GALACTIC NUCLEUS OUTBURSTS

    SciTech Connect

    Guo Fulai; Mathews, William G.

    2010-07-10

    Recent X-ray observations of galaxy clusters suggest that cluster populations are bimodally distributed according to central gas entropy and are separated into two distinct classes: cool core (CC) and non-cool core (NCC) clusters. While it is widely accepted that active galactic nucleus (AGN) feedback plays a key role in offsetting radiative losses and maintaining many clusters in the CC state, the origin of NCC clusters is much less clear. At the same time, a handful of extremely powerful AGN outbursts have recently been detected in clusters, with a total energy {approx}10{sup 61}-10{sup 62} erg. Using two-dimensional hydrodynamic simulations, we show that if a large fraction of this energy is deposited near the centers of CC clusters, which is likely common due to dense cores, these AGN outbursts can completely remove CCs, transforming them to NCC clusters. Our model also has interesting implications for cluster abundance profiles, which usually show a central peak in CC systems. Our calculations indicate that during the CC to NCC transformation, AGN outbursts efficiently mix metals in cluster central regions and may even remove central abundance peaks if they are not broad enough. For CC clusters with broad central abundance peaks, AGN outbursts decrease peak abundances, but cannot effectively destroy the peaks. Our model may simultaneously explain the contradictory (possibly bimodal) results of abundance profiles in NCC clusters, some of which are nearly flat, while others have strong central peaks similar to those in CC clusters. A statistical analysis of the sizes of central abundance peaks and their redshift evolution may shed interesting insights on the origin of both types of NCC clusters and the evolution history of thermodynamics and AGN activity in clusters.

  3. Pederson Current Dissipation In Emerging Active Regions

    NASA Astrophysics Data System (ADS)

    Leake, James E.; Linton, M. G.

    2011-05-01

    Pederson current dissipation in emerging active regions. Certain regions of the solar atmosphere, such as the photosphere and chromosphere, as well as prominences, contain a significant amount of neutral atoms, and a complete description of the plasma requires including the effects of partial ionization. In the chromosphere the dissipation of Pederson currents is important for the evolution of emerging magnetic fields. Due to the relatively high number density in the chromosphere, the ion-neutral collision time-scale is much smaller than timescales associated with flux emergence. Hence we use a single-fluid approach to model the partially ionized plasma. Looking at both the emergence of large-scale sub-surface structures, and the emergence and reconnection of undulatory fields, we investigate the effect of Pederson current dissipation on the state of the emerging field, on magnetic reconnection and on dissipative heating of the atmosphere. Specifically we examine the effect of motions across fieldlines in the partially ionized regions, and how this can increase the free energy supplied to the corona by flux emergence. We also look at reconnection associated with flux emergence in the partially ionized atmosphere, and how this can account for observed small-scale brightenings (Ellerman Bombs).

  4. Robustness of Nuclear Core Activity Reconstruction by Data Assimilation

    NASA Astrophysics Data System (ADS)

    Bouriquet, Bertrand; Argaud, Jean-Philippe; Erhard, Patrick; Massart, Sébastien; Ponçot, Angélique; Ricci, Sophie; Thual, Olivier

    Inspired from meteorological applications, data assimilation techniques can be used to perform an optimal reconstruction of the neutronic field in a nuclear reactor core. Measurements and simulation information, coming from a numerical model, are merged together to build a better estimation of the whole field. In this paper, we first study the robustness of the method when the amount of measured information varies. We then study the influence of the nature of the instruments and their spatial repartition on the efficiency of the field reconstruction. This study also highlights the instruments providing most information within a data assimilation procedure. The study of various network configurations of instruments in the nuclear core establishes that the influence of each instrument depends both on the individual instrumentation location as well as on the chosen network.

  5. HEROES Observations of a Quiescent Active Region

    NASA Astrophysics Data System (ADS)

    Shih, A. Y.; Christe, S.; Gaskin, J.; Wilson-Hodge, C.

    2014-12-01

    Hard X-ray (HXR) observations of solar flares reveal the signatures of energetic electrons, and HXR images with high dynamic range and high sensitivity can distinguish between where electrons are accelerated and where they stop. Even in the non-flaring corona, high-sensitivity HXR measurements may be able to detect the presence of electron acceleration. The High Energy Replicated Optics to Explore the Sun (HEROES) balloon mission added the capability of solar observations to an existing astrophysics balloon payload, HERO, which used grazing-incidence optics for direct HXR imaging. HEROES measures HXR emission from ~20 to ~75 keV with an angular resolution of 33" HPD. HEROES launched on 2013 September 21 from Fort Sumner, New Mexico, and had a successful one-day flight. We present the detailed analysis of the 7-hour observation of AR 11850, which sets new upper limits on the HXR emission from a quiescent active region, with corresponding constraints on the numbers of tens of keV energetic electrons present. Using the imaging capability of HEROES, HXR upper limits are also obtained for the quiet Sun surrounding the active region. We also discuss what can be achieved with new and improved HXR instrumentation on balloons.

  6. Active Region Loop Models and Observations

    NASA Astrophysics Data System (ADS)

    Landi, E.; Landini, M.

    2004-01-01

    The analysis of broad band images from EIT and TRACE and spectra from SUMER and CDS have triggered a heated debate on 1) whether the loops are isothermal for most of their length 2) whether they are multithermal across their section and 3) what is the shape of their heating function. Our work describes a detailed comparison between SOHO-CDS observations of an active region loop with a standard RTV-like loop model developed assuming a temperature-independent heating function in the energy balance equation and a variable loop cross-section. Observations of an active region loop recorded by CDS have been analyzed. Additional data from EIT MDI and Yohkoh-SXT have been considered. Electron density temperature and pressure along the selected loop structure have been measured by means of line ratio techniques and an emission measure analysis. Comparison with CDS data has shown that 1) the RTV-like model is not able to reproduce the observations 2) the loop is isothermal along most of its length 3) the loop is isothermal across its section.

  7. [Core competencies in public health: a regional framework for the Americas].

    PubMed

    Conejero, Juana Suárez; Godue, Charles; Gutiérrez, José Francisco García; Valladares, Laura Magaña; Rabionet, Silvia; Concha, José; Valdés, Manuel Vázquez; Gómez, Rubén Darío; Mujica, Oscar J; Cabezas, César; Lucano, Lindaura Liendo; Castellanos, Jorge

    2013-07-01

    The response is described to the 2010 call from the Pan American Health Organization to develop a Regional Framework on Core Competencies in Public Health, with a view to supporting the efforts of the countries in the Americas to build public health systems capacity as a strategy for optimal performance of the Essential Public Health Functions. The methodological process for the response was divided into four phases. In the first, a team of experts was convened who defined the methodology to be used during a workshop at the National Institute of Public Health of Mexico in 2010. The second phase involved formation of the working groups, using two criteria: experience and multidisciplinary membership, which resulted in a regional team with 225 members from 12 countries. This team prepared an initial proposal with 88 competencies. In the third phase, the competencies were cross-validated and their number reduced to 64. During the fourth phase, which included two workshops, in March 2011 (Medellín, Colombia) and June 2011 (Lima, Peru), discussions centered on analyzing the association between the results and the methodology.

  8. Core and region-enriched networks of behaviorally regulated genes and the singing genome

    PubMed Central

    Whitney, Osceola; Pfenning, Andreas R.; Howard, Jason T.; Blatti, Charles A; Liu, Fang; Ward, James M.; Wang, Rui; Audet, Jean-Nicolas; Kellis, Manolis; Mukherjee, Sayan; Sinha, Saurabh; Hartemink, Alexander J.; West, Anne E.; Jarvis, Erich D.

    2015-01-01

    Songbirds represent an important model organism for elucidating molecular mechanisms that link genes with complex behaviors, in part because they have discrete vocal learning circuits that have parallels with those that mediate human speech. We found that ~10% of the genes in the avian genome were regulated by singing, and we found a striking regional diversity of both basal and singing-induced programs in the four key song nuclei of the zebra finch, a vocal learning songbird. The region-enriched patterns were a result of distinct combinations of region-enriched transcription factors (TFs), their binding motifs, and presinging acetylation of histone 3 at lysine 27 (H3K27ac) enhancer activity in the regulatory regions of the associated genes. RNA interference manipulations validated the role of the calcium-response transcription factor (CaRF) in regulating genes preferentially expressed in specific song nuclei in response to singing. Thus, differential combinatorial binding of a small group of activity-regulated TFs and predefined epigenetic enhancer activity influences the anatomical diversity of behaviorally regulated gene networks. PMID:25504732

  9. High energy neutrinos from primary cosmic rays accelerated in the cores of active galaxies

    NASA Technical Reports Server (NTRS)

    Stecker, F. W.; Done, C.; Salamon, M. H.; Sommers, P.

    1991-01-01

    The spectra and high-energy neutrino fluxes are calculated from photomeson production in active galactic nuclei (AGN) such as quasars and Seyfert galaxies using recent UV and X-ray observations to define the photon fields and an accretion-disk shock-acceleration model for producing ultrahigh-energy cosmic rays in the AGN. Collectively AGN should produce the dominant isotropic neutrino background between 10 exp 4 and 10 exp 10 GeV. Measurement of this background could be critical in determining the energy-generation mechanism, evolution, and distribution of AGN. High-energy background spectra and spectra from bright AGN such as NGC4151 and 3C273 are predicted which should be observable with present detectors. High energy AGN nus should produce a sphere of stellar disruption around their cores which could explain their observed broad-line emission regions.

  10. High energy neutrinos from primary cosmic rays accelerated in the cores of active galaxies

    NASA Technical Reports Server (NTRS)

    Stecker, F. W.; Done, C.; Salamon, M. H.; Sommers, P.

    1991-01-01

    The spectra and high-energy neutrino fluxes are calculated from photomeson production in active galactic nuclei (AGN) such as quasars and Seyfert galaxies using recent UV and X-ray observations to define the photon fields and an accretion-disk shock-acceleration model for producing ultrahigh-energy cosmic rays in the AGN. Collectively AGN should produce the dominant isotropic neutrino background between 10 exp 4 and 10 exp 10 GeV. Measurement of this background could be critical in determining the energy-generation mechanism, evolution, and distribution of AGN. High-energy background spectra and spectra from bright AGN such as NGC4151 and 3C273 are predicted which should be observable with present detectors. High energy AGN nus should produce a sphere of stellar disruption around their cores which could explain their observed broad-line emission regions.

  11. PACAP38 Differentially Effects Genes and CRMP2 Protein Expression in Ischemic Core and Penumbra Regions of Permanent Middle Cerebral Artery Occlusion Model Mice Brain

    PubMed Central

    Hori, Motohide; Nakamachi, Tomoya; Shibato, Junko; Rakwal, Randeep; Tsuchida, Masachi; Shioda, Seiji; Numazawa, Satoshi

    2014-01-01

    Pituitary adenylate-cyclase activating polypeptide (PACAP) has neuroprotective and axonal guidance functions, but the mechanisms behind such actions remain unclear. Previously we examined effects of PACAP (PACAP38, 1 pmol) injection intracerebroventrically in a mouse model of permanent middle cerebral artery occlusion (PMCAO) along with control saline (0.9% NaCl) injection. Transcriptomic and proteomic approaches using ischemic (ipsilateral) brain hemisphere revealed differentially regulated genes and proteins by PACAP38 at 6 and 24 h post-treatment. However, as the ischemic hemisphere consisted of infarct core, penumbra, and non-ischemic regions, specificity of expression and localization of these identified molecular factors remained incomplete. This led us to devise a new experimental strategy wherein, ischemic core and penumbra were carefully sampled and compared to the corresponding contralateral (healthy) core and penumbra regions at 6 and 24 h post PACAP38 or saline injections. Both reverse transcription-polymerase chain reaction (RT-PCR) and Western blotting were used to examine targeted gene expressions and the collapsin response mediator protein 2 (CRMP2) protein profiles, respectively. Clear differences in expression of genes and CRMP2 protein abundance and degradation product/short isoform was observed between ischemic core and penumbra and also compared to the contralateral healthy tissues after PACAP38 or saline treatment. Results indicate the importance of region-specific analyses to further identify, localize and functionally analyse target molecular factors for clarifying the neuroprotective function of PACAP38. PMID:25257527

  12. Teaching the Common Core Math Standards with Hands-On Activities, Grades 6-8

    ERIC Educational Resources Information Center

    Muschla, Judith A.; Muschla, Gary Robert; Muschla, Erin

    2012-01-01

    The new Common Core State Standards for Mathematics have been formulated to provide students with instruction that will help them acquire a thorough knowledge of math at their grade level, which will in turn enable them to move on to higher mathematics with competence and confidence. "Hands-on Activities for Teaching the Common Core Math…

  13. Teaching the Common Core Math Standards with Hands-On Activities, Grades 6-8

    ERIC Educational Resources Information Center

    Muschla, Judith A.; Muschla, Gary Robert; Muschla, Erin

    2012-01-01

    The new Common Core State Standards for Mathematics have been formulated to provide students with instruction that will help them acquire a thorough knowledge of math at their grade level, which will in turn enable them to move on to higher mathematics with competence and confidence. "Hands-on Activities for Teaching the Common Core Math…

  14. The relationship of core strength and activation and performance on three functional movement screens.

    PubMed

    Johnson, Caleb D; Whitehead, Paul N; Pletcher, Erin R; Faherty, Mallory S; Lovaleka, Mita T; Eagle, Shawn R; Keenan, Karen A

    2017-04-18

    Current measures of core stability utilized by clinicians and researchers suffer from several shortcomings. Three functional movement screens appear, at face-value, to be dependent on the ability to activate and control core musculature. These three screens may present a viable alternative to current measures of core stability. Thirty-nine subjects completed a deep squat, trunk stability push-up, and rotary stability screen. Scores on the three screens were summed to calculate a composite score (COMP). During the screens, muscle activity was collected to determine the length of time that the bilateral erector spinae, rectus abdominus, external oblique, and gluteus medius muscles were active. Strength was assessed for core muscles (trunk flexion/extension, trunk rotation, hip abduction/adduction) and accessory muscles (knee flexion/extension, and pectoralis major). Two ordinal logistic regression equations were calculated with COMP as the outcome variable, and: 1) core strength and accessory strength, 2) only core strength. The first model was significant in predicting COMP (p=.004) (Pearson's Chi-Square=149.132, p=.435; Nagelkerke's R-Squared=.369). The second model was significant in predicting COMP (p=.001) (Pearson's Chi Square=148.837, p=.488; Nagelkerke's R-Squared=.362). The core muscles were found to be active for the majority of screens, with percentages of "time active" for each muscle ranging from 54%-86%. In conclusion, performance on the three screens is predicted by core strength, even when accounting for "accessory" strength variables. Further, it appears the screens elicit wide-ranging activation of core muscles. While more investigation is needed, these screens, collectively, appear to be a good assessment of core strength.

  15. Nanoflare Properties throughout Active Regions: Comparing SDO/AIA Observations with Modeled Active Region Light Curves

    NASA Astrophysics Data System (ADS)

    Viall, Nicholeen; Klimchuk, J.

    2012-05-01

    Coronal plasma in active regions is typically measured to be at temperatures near 1-3 MK. Is the majority of the coronal plasma in hydrostatic equilibrium, maintained at these temperatures through a form of quasi-steady heating, or is this simply a measure of the average temperature of widely varying, impulsively heated coronal plasma? Addressing this question is complicated by the fact that the corona is optically thin: many thousands of flux tubes which are heated completely independently are contributing to the total emission along a given line of sight. There is a large body of work focused on the heating of isolated features - coronal loops - which are impulsively heated, however it is the diffuse emission between loops which often comprises the majority of active region emission. Therefore in this study we move beyond isolated features and analyze all of the emission in an entire active region from all contributing flux tubes. We investigate light curves systematically using SDO/AIA observations. We also model the active region corona as a line-of-sight integration of many thousands of completely independently heated flux tubes. The emission from these flux tubes may be time dependent, quasi-steady, or a mix of both, depending on the cadence of heat release. We demonstrate that despite the superposition of randomly heated flux tubes, different distributions of nanoflare cadences produce distinct signatures in light curves observed with multi-wavelength and high time cadence data, such as those from SDO/AIA. We conclude that the majority of the active region plasma is not maintained in hydrostatic equilibrium, rather it is undergoing dynamic heating and cooling cycles. The observed emission is consistent with heating through impulsive nanoflares, whose energy is a function of location within the active region. This research was supported by an appointment to the NASA Postdoctoral Program at GSFC/NASA.

  16. Nanoflare Properties throughout Active Regions: Comparing SDO/AIA Observations with Modeled Active Region Light Curves

    NASA Technical Reports Server (NTRS)

    Viall, Nicholeen

    2012-01-01

    Coronal plasma in active regions is typically measured to be at temperatures near 1-3 MK. Is the majority of the coronal plasma in hydrostatic equilibrium, maintained at these temperatures through a form of quasi-steady heating, or is this simply a measure of the average temperature of widely varying, impulsively heated coronal plasma? Addressing this question is complicated by the fact that the corona is optically thin: many thousands of flux tubes which are heated completely independently are contributing to the total emission along a given line of sight. There is a large body of work focused on the heating of isolated features - coronal loops - which are impulsively heated, however it is the diffuse emission between loops which often comprises the majority of active region emission. Therefore in this study we move beyond isolated features and analyze all of the emission in an entire active region from all contributing flux tubes. We investigate light curves systematically using SDO/AIA observations. We also model the active region corona as a line-of-sight integration of many thousands of completely independently heated flux tubes. The emission from these flux tubes may be time dependent, quasi-steady, or a mix of both, depending on the cadence of heat release. We demonstrate that despite the superposition of randomly heated flux tubes, different distributions of nanoflare cadences produce distinct signatures in light curves observed with multi-wavelength and high time cadence data, such as those from SDO/AIA. We conclude that the majority of the active region plasma is not maintained in hydrostatic equilibrium, rather it is undergoing dynamic heating and cooling cycles. The observed emission is consistent with heating through impulsive nanoflares, whose energy is a function of location within the active region.

  17. Active Region Transient Brightenings : EIT Versus SXT

    NASA Astrophysics Data System (ADS)

    Berghmans, D.; McKenzie, D.; Clette, F.

    1999-10-01

    On May 13, 1998, the Extreme-Ultraviolet Imaging Telescope (EIT, on board SOHO) has produced a unique image sequence operating in 'shutterless mode' (SOHO JOP 80). In JOP 80, EIT is the leading instrument, followed by several space born instruments (SXT, TRACE, MDI, CDS, SUMER), as well as two observatories on the ground (in La Palma and Sac Peak). The target of the campaign was a relatively small but rapidly evolving active region (AR 8218). For the EIT contribution, a 15 s cadence was achieved in the Fe XII bandpass at 195 deg by leaving EIT's shutter open for 1 hour and operating the CCD in frame transfer mode. We have started the analysis of the huge data set, by making an inventory of the transients observed in the EIT image sequence. These transients range from a B3.5 flare producing a large plasma flow along pre-existing loops, to smaller EUV brightenings of active region loops. In addition, a new class of weaker footpoint brightenings was discovered that produce wave-like disturbances propagating along quasi-open field lines (see the presentation by Eva Robbrecht at this workshop). In this paper we take the opportunity provided by JOP 80, to investigate the correspondence of the transient brightenings observed by EIT in this active region, with the ARTB previously observed by SXT and studied by Shimizu (1992). Within the simultaneous high cadence SOHO JOP 80 image sequences, both EIT and SXT accummulated a few tens of brightening events. At the time of the writing of this abstract, we can say that most of the SXT events have indeed 1 or more EIT counterparts. Typically the SXT events are somewhat bigger than the EIT events where the latter are ussualy located toward the point of origin of the SXT events. Whereas a few brightenings exist in one dataset without any trace in the other dataset (in both directions), we have additionally for a few brightenings in the SXT data, a corresponding EIT darkening as if the plasma is suddenly heated and dissappears from

  18. Use of albedo for neutron reflector regions in reactor core 3-D simulations

    NASA Astrophysics Data System (ADS)

    Mohanakrishnan, P.

    1989-10-01

    In this paper we present two new simplified schemes for the application of the albedo concept of replacing the reflector in 3-D reactor core simulations. Both involve the numerical derivation of albedoes from the fluxes at the core- (blanket-) reflector interface obtained from sample calculations including the reflector. Diffusion theory is used for core calculations in both cases. In the first scheme a new method for "diagonalising" the albedo matrix is demonstrated. This achieves easy applicability of the albedo parameters in core simulations of a fast breeder reactor core, resulting in significant savings in computing efforts. The second scheme, applied to light water reactors, achieves better accuracy in core periphery power predictions with the use of only uniform coarse meshes throughout the core and the numerically derived albedoes.

  19. Dynamics and evolution of emerging active regions .

    NASA Astrophysics Data System (ADS)

    Battiato, V.; Billotta, S.; Contarino, L.; Romano, P.; Spadaro, D.; Zuccarello, F.

    In the framework of the study on active region emergence, we report the results obtained from the analysis of two ARs (NOAA 10050 and NOAA 10407), characterized by different lifetimes: recurrent the former and short-lived (7 days) the latter. The data used were acquired during two observational campaigns carried out at THEMIS telescope in IPM mode, coordinated with other instruments (IOACT, DOT, BBSO, MDI/SOHO, EIT/SOHO, TRACE). The results obtained have provided indications on the atmospheric layers where the first manifestations of the emerging AR are evidenced, on the rate of emergence of magnetic flux, on the upward velocity of AFS, on asymmetries in downward motions in the AFS legs.

  20. FIP bias in a sigmoidal active region

    NASA Astrophysics Data System (ADS)

    Baker, D.; Brooks, D. H.; Démoulin, P.; van Driel-Gesztelyi, Lidia; Green, L. M.; Steed, K.; Carlyle, J.

    2014-01-01

    We investigate first ionization potential (FIP) bias levels in an anemone active region (AR) - coronal hole (CH) complex using an abundance map derived from Hinode/EIS spectra. The detailed, spatially resolved abundance map has a large field of view covering 359'' × 485''. Plasma with high FIP bias, or coronal abundances, is concentrated at the footpoints of the AR loops whereas the surrounding CH has a low FIP bias, ~1, i.e. photospheric abundances. A channel of low FIP bias is located along the AR's main polarity inversion line containing a filament where ongoing flux cancellation is observed, indicating a bald patch magnetic topology characteristic of a sigmoid/flux rope configuration.

  1. EUV Observations of Active Region Dynamics

    NASA Astrophysics Data System (ADS)

    Deluca, E. E.; Cirtain, J. W.; del Zanna, G.; Mason, H. E.; Martens, P. C.; Schmelz, J.; Golub, L.

    2005-05-01

    Data collected during SoHO JOP 146, in collaboration with TRACE, is used to investigate the physical characteristics of coronal active region loops as a function of time and position along and across loop structures. These data include TRACE images in all three EUV passbands, and simultaneous CDS spectroscopic observations. Preliminary measurements of the loop temperature both along the loop half-length and loop cross-section are presented as a function of time. We will show the temperature and density profiles of several structures as a function of position, show changes in temperature and density with time and characterize the coronal background emission. Questions raised by these results will be greatly advanced with the high resolution spectra available from the EIS on Solar-B.

  2. Phage displayed HBV core antigen with immunogenic activity.

    PubMed

    Bahadir, Aylin Ozdemir; Balcioglu, Bertan Koray; Uzyol, Kamil Serkan; Hatipoglu, Ibrahim; Sogut, Ibrahim; Basalp, Aynur; Erdag, Berrin

    2011-12-01

    Hepatitis B is a major public health problem worldwide, which may lead to chronic liver diseases such as cirrhosis and hepatocellular carcinoma. The hepatitis B core antigen (HBcAg) is one of the major viral proteins, which forms the inner core of hepatitis B virus (HBV) particles. In this study, filamentous bacteriophage M13 was genetically modified to display the polypeptides of HBcAg in order to develop an alternative carrier system. HBcAg gene was inserted into the minor coat protein (pIII) gene of M13, and HBcAg was expressed on the phage surface as a whole protein. Antigenicity and immunogenicity of HBcAg were tested by immunizing BALB/c mice three times with HBcAg-displaying recombinant phages. After successful immunization, one of the mice with high antibody titer to HBcAg was selected for fusion, and four monoclonal antibodies specific for HBcAg were developed. This result showed that HBcAg-displaying recombinant bacteriophages are immunogenic and can potentially be used for the development of monoclonal antibodies.

  3. Synthesis, characterization and bactericidal activity of silica/silver core-shell nanoparticles.

    PubMed

    Devi, Pooja; Patil, Supriya Deepak; Jeevanandam, P; Navani, Naveen K; Singla, M L

    2014-05-01

    Silica/silver core-shell nanoparticles (NPs) were synthesized by coating silver NPs on silica core particles (size ~300 ± 10 nm) via electro less reduction method. The core-shell NPs were characterized for their structural, morphological, compositional and optical behavior using X-ray diffraction, scanning electron microscopy, energy dispersive X-ray analysis and UV-Visible spectroscopy, respectively. The size (16-35 nm) and loaded amount of silver NPs on the silica core were found to be dependent upon reaction time and activation method of silica. The bactericidal activity of the NPs was tested by broth micro dilution method against both Bacillus subtilis (gram positive) and Escherichia coli ATCC25922 (gram negative) bacterium. The bactericidal activity of silica/silver core-shell NPS is more against E. coli ATCC25922, when compared to B. subtilis. The minimal inhibitory concentration of the core-shell NPs ranged from 7.8 to 250 μg/mL and is found to be dependent upon the amount of silver on silica, the core. These results suggest that silica/silver core-shell NPs can be utilized as a strong substitutional candidate to control pathogenic bacterium, which are otherwise resistant to antibiotics, making them applicable in diverse medical devices.

  4. Active region helicity evolution and related coronal mass ejection activity.

    NASA Astrophysics Data System (ADS)

    Green, L.; Mandrini, C.; van Driel-Gesztelyi, L.; Demoulin, P.

    The computation of magnetic helicity has become increasingly important in the studies of solar activity. Observations of helical structures in the solar atmosphere, and their subsequent ejection into the interplanetary medium, have resulted in considerable interest to find the link between the amount of helicity in the coronal magnetic field and the origin of coronal mass ejections (CMEs). This is reinforced by theory which shows magnetic helicity to be a well preserved quantity (Berger, 1984), and so with a continued injection into the corona an endless accumulation will occur. CMEs therefore provide a natural method to remove helicity from the corona. Recent works (DeVore, 2000, Chae, 2001, Chae et al., 2001, Demoulin et al., 2002, Green et al., 2002) have endeavoured to find the source of helicity in the corona to explain the observed CME activity in specific cases. The main candidates being differential rotation, shear motions or a transfer of helicity from below the photosphere into the corona. In order to establish a confident relation between CMEs and helicity, these works needs to be expanded to include CME source regions with different characteristics. A study of a very different active region will be presented and the relationship between helicity content and CME activity will be discussed in the framework of the previous studies.

  5. Magnetized Converging Flows toward the Hot Core in the Intermediate/High-mass Star-forming Region NGC 6334 V

    NASA Astrophysics Data System (ADS)

    Juárez, Carmen; Girart, Josep M.; Zamora-Avilés, Manuel; Tang, Ya-Wen; Koch, Patrick M.; Liu, Hauyu Baobab; Palau, Aina; Ballesteros-Paredes, Javier; Zhang, Qizhou; Qiu, Keping

    2017-07-01

    We present Submillimeter Array (SMA) observations at 345 GHz toward the intermediate/high-mass cluster-forming region NGC 6334 V. From the dust emission we spatially resolve three dense condensations, the brightest one presenting the typical chemistry of a hot core. The magnetic field (derived from the dust polarized emission) shows a bimodal converging pattern toward the hot core. The molecular emission traces two filamentary structures at two different velocities, separated by 2 km s-1, converging to the hot core and following the magnetic field distribution. We compare the velocity field and the magnetic field derived from the SMA observations with magnetohydrodynamic simulations of star-forming regions dominated by gravity. This comparison allows us to show how the gas falls in from the larger-scale extended dense core (˜0.1 pc) of NGC 6334 V toward the higher-density hot core region (˜0.02 pc) through two distinctive converging flows dragging the magnetic field, whose strength seems to have been overcome by gravity.

  6. Highly active dealloyed Cu@Pt core-shell electrocatalyst towards 2-propanol electrooxidation in acidic solution

    NASA Astrophysics Data System (ADS)

    Poochai, Chatwarin

    2017-02-01

    Dealloyed Cu@Pt core-shell electrocatalyst was fabricated by cyclic co-electrodeposition and selective Cu dealloying (CCEd-sCuD) on carbon paper (CP), namely Cu@Pt/CP. The Cu@Pt/CP exhibited a core-shell structure comprising with a Cu-rich core and a Pt-rich shell. The crystalline phases of Pt/CP and Cu@Pt/CP were a face-centered cubic (fcc). The compressive lattice strain approximately 0.85% was found in the Cu@Pt/CP owing to a lattice mismatch between a core and a shell region. In the core-region, Cu was formed Pt-Cu alloy as major and copper oxide and also metallic copper as minor. The morphology and grain size of the Cu@Pt/CP displayed a porous spherical shape with 100 nm in diameter, while those of Pt/CP seemed to be a cubic shape with smaller diameter of 40 nm. In electrochemical and catalytic activity, the surface of Cu@Pt/CP had a larger electrochemical active surface area (ECSA) than that of Pt/CP due to a porous formation caused by Cu dealloying. It is not surprising that the Cu@Pt/CP showed higher catalytic activity and greater stability towards 0.5 M 2-propanol electrooxidation in 0.5 M H2SO4 in terms of peak current density (jp), peak potential (Ep), onset potential (Eonset), diffusion coefficient (D), and charge transfer resistance (Rct) which were caused by electronic structure modification, higher compressive lattice strain, and larger ECSA, compared with Pt/CP.

  7. LUC7L3/CROP inhibits replication of hepatitis B virus via suppressing enhancer II/basal core promoter activity

    PubMed Central

    Li, Yuan; Ito, Masahiko; Sun, Suofeng; Chida, Takeshi; Nakashima, Kenji; Suzuki, Tetsuro

    2016-01-01

    The core promoter of hepatitis B virus (HBV) genome is a critical region for transcriptional initiation of 3.5 kb, pregenome and precore RNAs and for the viral replication. Although a number of host-cell factors that potentially regulate the viral promoter activities have been identified, the molecular mechanisms of the viral gene expression, in particular, regulatory mechanisms of the transcriptional repression remain elusive. In this study, we identified LUC7 like 3 pre-mRNA splicing factor (LUC7L3, also known as hLuc7A or CROP) as a novel interacting partner of HBV enhancer II and basal core promoter (ENII/BCP), key elements within the core promoter, through the proteomic screening and found that LUC7L3 functions as a negative regulator of ENII/BCP. Gene silencing of LUC7L3 significantly increased expression of the viral genes and antigens as well as the activities of ENII/BCP and core promoter. In contrast, overexpression of LUC7L3 inhibited their activities and HBV replication. In addition, LUC7L3 possibly contributes to promotion of the splicing of 3.5 kb RNA, which may also be involved in negative regulation of the pregenome RNA level. This is the first to demonstrate the involvement of LUC7L3 in regulation of gene transcription and in viral replication. PMID:27857158

  8. Widespread active detachment faulting and core complex formation near 13 degrees N on the Mid-Atlantic Ridge.

    PubMed

    Smith, Deborah K; Cann, Johnson R; Escartín, Javier

    2006-07-27

    Oceanic core complexes are massifs in which lower-crustal and upper-mantle rocks are exposed at the sea floor. They form at mid-ocean ridges through slip on detachment faults rooted below the spreading axis. To date, most studies of core complexes have been based on isolated inactive massifs that have spread away from ridge axes. Here we present a survey of the Mid-Atlantic Ridge near 13 degrees N containing a segment in which a number of linked detachment faults extend for 75 km along one flank of the spreading axis. The detachment faults are apparently all currently active and at various stages of development. A field of extinct core complexes extends away from the axis for at least 100 km. Our observations reveal the topographic characteristics of actively forming core complexes and their evolution from initiation within the axial valley floor to maturity and eventual inactivity. Within the surrounding region there is a strong correlation between detachment fault morphology at the ridge axis and high rates of hydroacoustically recorded earthquake seismicity. Preliminary examination of seismicity and seafloor morphology farther north along the Mid-Atlantic Ridge suggests that active detachment faulting is occurring in many segments and that detachment faulting is more important in the generation of ocean crust at this slow-spreading ridge than previously suspected.

  9. Differential influence of instruments in nuclear core activity evaluation by data assimilation

    NASA Astrophysics Data System (ADS)

    Bouriquet, Bertrand; Argaud, Jean-Philippe; Erhard, Patrick; Massart, Sébastien; Ponçot, Angélique; Ricci, Sophie; Thual, Olivier

    2011-01-01

    The global neutronic activity fields of a nuclear core can be reconstructed using data assimilation. Indeed, data assimilation allows to combine both measurements from instruments and information from a model, to evaluate the best possible neutronic activity within the core. We present and apply a specific procedure which evaluates the influence of measures by adding or removing instruments in a given measurement network (possibly empty). The study of various network configurations for the instruments in the nuclear core establishes that the influence of the instruments depends both on the independent instrumentation location and on the chosen network.

  10. Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions

    PubMed Central

    2010-01-01

    Background The pan-genome of a bacterial species consists of a core and an accessory gene pool. The accessory genome is thought to be an important source of genetic variability in bacterial populations and is gained through lateral gene transfer, allowing subpopulations of bacteria to better adapt to specific niches. Low-cost and high-throughput sequencing platforms have created an exponential increase in genome sequence data and an opportunity to study the pan-genomes of many bacterial species. In this study, we describe a new online pan-genome sequence analysis program, Panseq. Results Panseq was used to identify Escherichia coli O157:H7 and E. coli K-12 genomic islands. Within a population of 60 E. coli O157:H7 strains, the existence of 65 accessory genomic regions identified by Panseq analysis was confirmed by PCR. The accessory genome and binary presence/absence data, and core genome and single nucleotide polymorphisms (SNPs) of six L. monocytogenes strains were extracted with Panseq and hierarchically clustered and visualized. The nucleotide core and binary accessory data were also used to construct maximum parsimony (MP) trees, which were compared to the MP tree generated by multi-locus sequence typing (MLST). The topology of the accessory and core trees was identical but differed from the tree produced using seven MLST loci. The Loci Selector module found the most variable and discriminatory combinations of four loci within a 100 loci set among 10 strains in 1 s, compared to the 449 s required to exhaustively search for all possible combinations; it also found the most discriminatory 20 loci from a 96 loci E. coli O157:H7 SNP dataset. Conclusion Panseq determines the core and accessory regions among a collection of genomic sequences based on user-defined parameters. It readily extracts regions unique to a genome or group of genomes, identifies SNPs within shared core genomic regions, constructs files for use in phylogeny programs based on both the presence

  11. Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions.

    PubMed

    Laing, Chad; Buchanan, Cody; Taboada, Eduardo N; Zhang, Yongxiang; Kropinski, Andrew; Villegas, Andre; Thomas, James E; Gannon, Victor P J

    2010-09-15

    The pan-genome of a bacterial species consists of a core and an accessory gene pool. The accessory genome is thought to be an important source of genetic variability in bacterial populations and is gained through lateral gene transfer, allowing subpopulations of bacteria to better adapt to specific niches. Low-cost and high-throughput sequencing platforms have created an exponential increase in genome sequence data and an opportunity to study the pan-genomes of many bacterial species. In this study, we describe a new online pan-genome sequence analysis program, Panseq. Panseq was used to identify Escherichia coli O157:H7 and E. coli K-12 genomic islands. Within a population of 60 E. coli O157:H7 strains, the existence of 65 accessory genomic regions identified by Panseq analysis was confirmed by PCR. The accessory genome and binary presence/absence data, and core genome and single nucleotide polymorphisms (SNPs) of six L. monocytogenes strains were extracted with Panseq and hierarchically clustered and visualized. The nucleotide core and binary accessory data were also used to construct maximum parsimony (MP) trees, which were compared to the MP tree generated by multi-locus sequence typing (MLST). The topology of the accessory and core trees was identical but differed from the tree produced using seven MLST loci. The Loci Selector module found the most variable and discriminatory combinations of four loci within a 100 loci set among 10 strains in 1 s, compared to the 449 s required to exhaustively search for all possible combinations; it also found the most discriminatory 20 loci from a 96 loci E. coli O157:H7 SNP dataset. Panseq determines the core and accessory regions among a collection of genomic sequences based on user-defined parameters. It readily extracts regions unique to a genome or group of genomes, identifies SNPs within shared core genomic regions, constructs files for use in phylogeny programs based on both the presence/absence of accessory regions

  12. Transcriptional activation by LR1 at the Eµ enhancer and switch region sites

    PubMed Central

    Hanakahi, L. A.; Maizels, Nancy

    2000-01-01

    LR1 is a B cell-specific, sequence-specific duplex DNA binding activity which is induced in B cells carrying out class switch recombination. Here we identify several properties of LR1 which enable it to function in transcriptional regulation. We show that LR1 contributes to transcriptional activation by the Eµ immunoglobulin heavy chain intron enhancer by binding to a site within the enhancer core. We further show that LR1 bends DNA upon binding. In addition, we show that LR1 is itself a bona fide transcriptional activator, as multimerized LR1 sites produce an element which can enhance transcription from a minimal promoter. In order for class switch recombination to occur, an activating signal must be transmitted via the Eµ core, and both S regions targeted for recombination must be actively transcribed. The properties of LR1 that we have identified suggest distinct potential functions of LR1 duplex DNA binding activity in class switch recombination. First, LR1 may contribute to recombinational activation by the Eµ core. Second, there are multiple potential LR1 duplex binding sites in each of the G-rich switch regions, and LR1 bound at contiguous sites may enhance recombination by stimulating transcription of the S regions. PMID:10908319

  13. Plans to Adopt and Implement Common Core State Standards in the Southeast Region States. Issues & Answers. REL 2012-No. 136

    ERIC Educational Resources Information Center

    Anderson, Kim; Harrison, Tiffany; Lewis, Karla

    2012-01-01

    Based on interviews with state officials in the six Southeast Region states (Alabama, Florida, Georgia, Mississippi, North Carolina, and South Carolina), this study describes state processes for adopting the Common Core State Standards (a common set of expectations across states for what students are expected to know in English language arts and…

  14. Observations of Cyanopolyynes toward Four High-mass Star-forming Regions Containing Hot Cores

    NASA Astrophysics Data System (ADS)

    Taniguchi, Kotomi; Saito, Masao; Hirota, Tomoya; Ozeki, Hiroyuki; Miyamoto, Yusuke; Kaneko, Hiroyuki; Minamidani, Tetsuhiro; Shimoikura, Tomomi; Nakamura, Fumitaka; Dobashi, Kazuhito

    2017-07-01

    We carried out line survey observations at the 26-30 GHz band toward the four high-mass star-forming regions containing hot cores, G10.30-0.15, G12.89+0.49, G16.86-2.16, and G28.28-0.36, with the Robert C. Byrd Green Bank Telescope. We have detected HC5N from all of the sources, and HC7N from the three sources, except for G10.30-0.15. We further conducted observations of HC5N at the 42-46 GHz and 82-103 GHz bands toward the three sources, G12.89+0.49, G16.86-2.16, and G28.28-0.36, with the Nobeyama 45 m radio telescope. The rotational lines of HC5N with the high-excitation energies ({E}{{u}}/k˜ 63{--}100 K), which are hardly excited in the cold dark clouds, have been detected from the three sources. The rotational temperatures of HC5N are found to be ˜13-20 K in the three sources. The detection of the lines with the high-excitation energies and the derived rotational temperatures indicate that HC5N exists in the warm gas within 0.07-0.1 pc radii around massive young stellar objects. The column densities of HC5N in the three sources are derived to be (˜2.0-2.8) × {10}13 cm-2. We compare the ratios between N(HC5N) the column density of HC5N and W(CH3OH) the integrated intensity of the thermal CH3OH emission line among the three high-mass star-forming regions. We found a possibility of the chemical differentiation in the three high-mass star-forming regions; G28.28-0.36 shows the largest N(HC5N)/W(CH3OH) ratio of > 8.0× {10}14 in units of (K km s-1)-1 cm-2, while G12.89+0.49 and G16.86-2.16 show the smaller values (˜ 2× {10}13).

  15. Evolutionary status of dense cores in the NGC 1333 IRAS 4 star-forming region

    NASA Astrophysics Data System (ADS)

    Koumpia, E.; van der Tak, F. F. S.; Kwon, W.; Tobin, J. J.; Fuller, G. A.; Plume, R.

    2016-10-01

    Context. Protostellar evolution after the formation of the protostar is becoming reasonably well characterized, but the evolution from a prestellar core to a protostar is not well known, although the first hydrostatic core (FHSC) must be a pivotal step. Aims: NGC 1333 - IRAS 4C is a potentially very young object that we can directly compare with the nearby Class 0 objects IRAS 4A and IRAS 4B. Observational constraints are provided by spectral imaging from the JCMT Spectral Legacy Survey (330-373 GHz). We present integrated intensity and velocity maps of several species, including CO, H2CO and CH3OH. CARMA observations provide additional information with which we can distinguish IRAS 4C from other evolutionary stages. Methods: We present the observational signatures of the velocity of an observed outflow, the degree of CO depletion, the deuterium fractionation of [DCO+]/[HCO+], and gas kinetic temperatures. Results: We report differences between the three sources in four aspects: a) the kinetic temperature as probed using the H2CO lines is much lower toward IRAS 4C than the other two sources; b) the line profiles of the detected species show strong outflow activity toward IRAS 4A and IRAS 4B, but not toward IRAS 4C; c) the HCN/HNC is <1 toward IRAS 4C, which confirms the cold nature of the source; d) the degree of CO depletion and the deuteration are lowest toward the warmest of the sources, IRAS 4B. Conclusions: IRAS 4C seems to be in a different evolutionary state than the sources IRAS 4A and IRAS 4B. We can probably exclude the FHSC stage becaues of the relatively low Lsmm/Lbol ( 6%), and we investigate the earliest accretion phase of Class 0 stage and the transition between Class 0 to Class I. Our results do not show a consistent scenario for either case; the main problem is the absence of outflow activity and the cold nature of IRAS 4C. The number of FHSC candidates in Perseus is 10 times higher than current models predict, which suggests that the lifespan of

  16. Hepatitis B viral core protein disrupts human host gene expression by binding to promoter regions

    PubMed Central

    2012-01-01

    Background The core protein (HBc) of hepatitis B virus (HBV) has been implicated in the malignant transformation of chronically-infected hepatocytes and displays pleiotropic functions, including RNA- and DNA-binding activities. However, the mechanism by which HBc interacts with the human genome to exert effects on hepatocyte function remains unknown. This study investigated the distribution of HBc binding to promoters in the human genome and evaluated its effects on the related genes’ expression. Results Whole-genome chromatin immunoprecipitation microarray (ChIP-on-chip) analysis was used to identify HBc-bound human gene promoters. Gene Ontology and pathway analyses were performed on related genes. The quantitative polymerase chain reaction assay was used to verify ChIP-on-chip results. Five novel genes were selected for luciferase reporter assay evaluation to assess the influence of HBc promoter binding. The HBc antibody immunoprecipitated approximately 3100 human gene promoters. Among these, 1993 are associated with known biological processes, and 2208 regulate genes with defined molecular functions. In total, 1286 of the related genes mediate primary metabolic processes, and 1398 encode proteins with binding activity. Sixty-four of the promoters regulate genes related to the mitogen-activated protein kinase (MAPK) pathways, and 41 regulate Wnt/beta-catenin pathway genes. The reporter gene assay indicated that HBc binding up-regulates proto-oncogene tyrosine-protein kinase (SRC), type 1 insulin-like growth factor receptor (IGF1R), and neurotrophic tyrosine kinase receptor 2 (NTRK2), and down-regulates v-Ha-ras Harvey rat sarcoma viral oncogene (HRAS). Conclusion HBc has the ability to bind a large number of human gene promoters, and can disrupt normal host gene expression. Manipulation of the transcriptional profile in HBV-infected hepatocytes may represent a key pathogenic mechanism of HBV infection. PMID:23088787

  17. Critical Thoughts About the Core Entrustable Professional Activities in Undergraduate Medical Education.

    PubMed

    Krupat, Edward

    2017-08-29

    The Core Entrustable Professional Activities for Entering Residency (Core EPAs) have taken a strong hold on undergraduate medical education (UME). This Perspective questions their value added and considers the utility of the Core EPAs along two separate dimensions: (1) the ways they change the content and focus of the goals of UME; and (2) the extent to which entrustable professional activity (EPA)-based assessment conforms to basic principles of measurement theory as practiced in the social sciences. Concerning content and focus, the author asks whether the 13 Core EPAs frame UME too narrowly, putting competencies into the background and overlooking certain aspirational, but important and measurable, objectives of UME. The author also discusses the unevenness of EPAs in terms of their breadth and their developmental status as core activities. Regarding measurement and assessment, the author raises concerns that the EPA metric introduces layers of inference that may cause distortions and hinder accuracy and rater agreement. In addition, the use of weak anchors and multidimensional scales is also of concern. The author concludes with a proposal for reframing the Core EPAs and Accreditation Council for Graduate Medical Education competencies into broadly defined sets of behaviors, referred to as "Tasks of Medicine," and calls for the development of a systematic and longitudinal research agenda. The author asserts that "slowing down when you should" applies to medical education as well as patient care, and calls for a reevaluation of the Core EPAs before further commitment to them.

  18. The Life Cycle of Active Region Magnetic Fields

    NASA Astrophysics Data System (ADS)

    Cheung, M. C. M.; van Driel-Gesztelyi, L.; Martínez Pillet, V.; Thompson, M. J.

    2017-09-01

    We present a contemporary view of how solar active region magnetic fields are understood to be generated, transported and dispersed. Empirical trends of active region properties that guide model development are discussed. Physical principles considered important for active region evolution are introduced and advances in modeling are reviewed.

  19. Dynamics of emerging active region flux loops

    NASA Technical Reports Server (NTRS)

    Fan, Y.; Fisher, G. H.; Mcclymont, A. N.

    1994-01-01

    The buoyant rise of a magnetic flux loop arising from a single perturbed segment of a toroidal flux ring lying slightly beneath the base of the convection zone is studied by way of numerical simulations. We have considered flux loop evolution assuming both solid-body rotation, and differential rotation consistent with recent results from helioseismology. Our major results are presented, and we offer some speculations on the decay of active regions, based on the results of our studies. We speculate that as plasma in the tube attempts to establish hydrostatic equilibrium along the field lines after the flux emergence has taken place, the tube field strength at some intermediate depths below the surface becomes sufficiently small at the surface portions of the tube (which have cooled and undergone convective collapse) become dynamically disconnected from those portions near the base of the convection zone. The surface proportions of the emerged flux tubes are then transported by motions near the photosphere, such as supergranular convection and meridional flow.

  20. Complex Network for Solar Active Regions

    NASA Astrophysics Data System (ADS)

    Daei, Farhad; Safari, Hossein; Dadashi, Neda

    2017-08-01

    In this paper we developed a complex network of solar active regions (ARs) to study various local and global properties of the network. The values of the Hurst exponent (0.8-0.9) were evaluated by both the detrended fluctuation analysis and the rescaled range analysis applied on the time series of the AR numbers. The findings suggest that ARs can be considered as a system of self-organized criticality (SOC). We constructed a growing network based on locations, occurrence times, and the lifetimes of 4227 ARs recorded from 1999 January 1 to 2017 April 14. The behavior of the clustering coefficient shows that the AR network is not a random network. The logarithmic behavior of the length scale has the characteristics of a so-called small-world network. It is found that the probability distribution of the node degrees for undirected networks follows the power law with exponents of about 3.7-4.2. This indicates the scale-free nature of the AR network. The scale-free and small-world properties of the AR network confirm that the system of ARs forms a system of SOC. Our results show that the occurrence probability of flares (classified by GOES class C> 5, M, and X flares) in the position of the AR network hubs takes values greater than that obtained for other nodes.

  1. Thermal analysis of HTS air-core transformer used in voltage compensation type active SFCL

    NASA Astrophysics Data System (ADS)

    Song, M.; Tang, Y.; Li, J.; Zhou, Y.; Chen, L.; Ren, L.

    2010-11-01

    The three-phase voltage compensation type active superconducting fault current limiter (SFCL) is composed of three HTS air-core transformers and a three-phase four-wire Pulse Width Modulation (PWM) converter. The primary winding of the each phase HTS air-core transformer is in series with the main system, and the second winding is connected with the PWM converter. The single-phase conduction-cooled HTS air-core transformer is consisting of four double-pancakes wound by the Bi2223/Ag tape. In this paper, according to the electromagnetic analysis on the single-phase HTS air-core transformer, its AC loss corresponding to different operation modes is calculated. Furthermore, the thermal behaviors are studied by the time-stepping numerical simulations. On the basis of the simulation results, the related problems with the HTS air-core transformer's thermal stability are discussed.

  2. Core-shell Au@Pd nanoparticles with enhanced catalytic activity for oxygen reduction reaction via core-shell Au@Ag/Pd constructions

    PubMed Central

    Chen, Dong; Li, Chengyin; Liu, Hui; Ye, Feng; Yang, Jun

    2015-01-01

    Core-shell nanoparticles often exhibit improved catalytic properties due to the lattice strain created in these core-shell particles. Herein, we demonstrate the synthesis of core-shell Au@Pd nanoparticles from their core-shell Au@Ag/Pd parents. This strategy begins with the preparation of core-shell Au@Ag nanoparticles in an organic solvent. Then, the pure Ag shells are converted into the shells made of Ag/Pd alloy by galvanic replacement reaction between the Ag shells and Pd2+ precursors. Subsequently, the Ag component is removed from the alloy shell using saturated NaCl solution to form core-shell Au@Pd nanoparticles with an Au core and a Pd shell. In comparison with the core-shell Au@Pd nanoparticles upon directly depositing Pd shell on the Au seeds and commercial Pd/C catalysts, the core-shell Au@Pd nanoparticles via their core-shell Au@Ag/Pd templates display superior activity and durability in catalyzing oxygen reduction reaction, mainly due to the larger lattice tensile effect in Pd shell induced by the Au core and Ag removal. PMID:26144550

  3. Iron-silicate reaction at CMB and formation of core signature in plume source region: An experimental approach

    NASA Astrophysics Data System (ADS)

    Ohtani, E.; Sakai, T.; Kondo, T.; Miyahara, M.; Terasaki, H.

    2006-12-01

    Recent progress of laser heating diamond anvil cell (LHDAC) techniques made it possible to achieve the conditions of pressures and temperatures exceeding the core-mantle boundary conditions, i.e., 130 GPa and 3000-3500 K, and we can now be possible to study the recovered samples from the condition of the core- mantle boundary. We used the focused ion beam (FIB) method for preparation of the recovered samples and the analytical transmission electron microscope (ATEM) for their characterization, which are the ideal tools for studying the recovered samples from mega-bar conditions. In order to clarify the structure of the bottom of the CMB region, we have conducted high pressure and temperature experiments on the reaction between metallic iron and post-perovskite which can simulate the chemical reactions at CMB. We have conducted reaction experiments between molten iron and post-perovskite at the conditions equivalent to the CMB, 139 GPa and 3000 K. Significant amounts of oxygen up to 6.3 wt. percent and silicon up to 4.0 wt. percent are dissolved in metallic iron, and the solubility of silicon and oxygen in metallic iron can readily account for 7-10 wt. percent of the core density deficit. The dissolution of silicon into molten iron in the primordial magma ocean with the depth of the deep lower mantle can account for the Mg/Si ratio of the mantle higher than that of C1-chondrite. The dihedral angle between post-perovskite and molten iron is around 67 degrees, which is larger than that of perovskite and molten iron, 51 degrees (Takafuji et al., 2004). A core signature has been reported as Re and Os isotope anomalies in the plume magmas originating from the core-mantle boundary region, and such isotopic anomalies can be easily generated by contamination of 0.5-1 wt. percent of the trapped core metal at CMB (e.g., Brandon et al., 2005). A significant disturbance is expected at CMB to form a mixing region of the mantle and core materials as was suggested by Kellogg et al

  4. Microfluidic synthesis of Ag@Cu2O core-shell nanoparticles with enhanced photocatalytic activity.

    PubMed

    Tao, Sha; Yang, Mei; Chen, Huihui; Ren, Mingyue; Chen, Guangwen

    2017-01-15

    A microfluidic-based method for the continuous synthesis of Ag@Cu2O core-shell nanoparticles (NPs) has been developed. It only took 32s to obtain Ag@Cu2O core-shell NPs, indicating a high efficiency of this microfluidic-based method. Triangular Ag nanoprisms were employed as the cores for the overgrowth of Cu2O through the reduction of Cu(OH)4(2-) with ascorbic acid. The as-synthesized samples were characterized by XRD, TEM, SEM, HAADF-STEM, EDX, HRTEM, UV-vis spectra and N2 adsorption-desorption. The characterization results revealed that the as-synthesized Ag@Cu2O core-shell NPs exhibited a well-defined core-shell nanostructure with a polycrystalline shell, which was composed of numbers of Cu2O domains epitaxially growing on the triangular Ag nanoprism. It was concluded that the synthesis parameters such as the molar ratio of trisodium citrate to AgNO3, H2O2 to AgNO3, NaOH to CuSO4, ascorbic acid to CuSO4 and AgNO3 to CuSO4 had significant effect on the synthesis of Ag@Cu2O core-shell NPs. Moreover, Ag@Cu2O core-shell NPs exhibited superior catalytic activity in comparison with pristine Cu2O NPs towards the visible light-driven degradation of methyl orange. This enhanced photocatalytic activity of Ag@Cu2O core-shell NPs was attributed to the larger BET surface area and improved charge separation efficiency. The trapping experiment indicated that holes and superoxide anion radicals were the major reactive species in the photodegradation of methyl orange over Ag@Cu2O core-shell NPs. In addition, Ag@Cu2O core-shell NPs showed no obvious deactivation in the cyclic test.

  5. [Value of fine needle aspiration cytology and core needle biopsy in the head and neck region].

    PubMed

    Thierauf, J; Hoffmann, T K; Bommer, M; Veit, J A; Lindemann, J

    2015-05-01

    Fine-needle aspiration cytology (FNAC) and core-needle biopsy (CNB) represent 2 minimal invasive methods for further assessment of suspect lesions of the head and neck area. However, only limited data on the direct comparison of both methods has been published. The aim of this retrospective study was to evaluate the diagnostic value of FNAC and CNB and to compare their sensitivity and specificity. Between 2005 and 2012, CNB was performed in 86 patients and FNAC in 408 patients. 52 of 86 CNB-patients and 224 of 408 FNAC-patients underwent surgery afterwards and were included into the study (n=276). In order to compare the results of both methods the corresponding final histopathological finding from surgery was considered. The sensitivity of the FNAC-group was higher (85%) compared to the CNB-group (80%), the specificity (87 vs. 94%) as well as the positive predictive value (64 vs. 97%) was lower. The negative predictive value (92 vs. 71%) and also the false negative value of the FNAC (5 vs. 13%) were superior to the results of the CNB-group. Concerning the false positive value the CNB-group showed better results (2 vs. 15%). Both methods are well suited to clarify the dignity of lesions in the head and neck region. In the current case series, FNAC seemed particularly suitable for diagnosis of hematologic diseases and the exclusion of malignancy in suspicious lymph nodes. The GNP has proven to be valid in the detection of tumor recurrences in irradiated or previously operated tissue, furthermore the definitive oncological treatment can be planed, based on the histopathological results obtained by GNP. © Georg Thieme Verlag KG Stuttgart · New York.

  6. Activation lateralization in human core, belt, and parabelt auditory fields with unilateral deafness compared to normal hearing.

    PubMed

    Burton, Harold; Firszt, Jill B; Holden, Timothy; Agato, Alvin; Uchanski, Rosalie M

    2012-05-15

    We studied activation magnitudes in core, belt, and parabelt auditory cortex in adults with normal hearing (NH) and unilateral hearing loss (UHL) using an interrupted, single-event design and monaural stimulation with random spectrographic sounds. NH patients had one ear blocked and received stimulation on the side matching the intact ear in UHL. The objective was to determine whether the side of deafness affected lateralization and magnitude of evoked blood oxygen level-dependent responses across different auditory cortical fields (ACFs). Regardless of ear of stimulation, NH showed larger contralateral responses in several ACFs. With right ear stimulation in UHL, ipsilateral responses were larger compared to NH in core and belt ACFs, indicating neuroplasticity in the right hemisphere. With left ear stimulation in UHL, only posterior core ACFs showed larger ipsilateral responses, suggesting that most ACFs in the left hemisphere had greater resilience against reduced crossed inputs from a deafferented right ear. Parabelt regions located posterolateral to core and belt auditory cortex showed reduced activation in UHL compared to NH irrespective of RE/LE stimulation and lateralization of inputs. Thus, the effect in UHL compared to NH differed by ACF and ear of deafness.

  7. Activation lateralization in human core, belt, and parabelt auditory fields with unilateral deafness compared to normal hearing

    PubMed Central

    Burton, Harold; Firszt, Jill B.; Holden, Timothy; Agato, Alvin; Uchanski, Rosalie M.

    2012-01-01

    We studied activation magnitudes in core, belt, and parabelt auditory cortex in adults with normal hearing (NH) and unilateral hearing loss (UHL) using an interrupted, single-event design and monaural stimulation with random spectrographic sounds. NH patients had one ear blocked and received stimulation on the side matching the intact ear in UHL. The objective was to determine whether the side of deafness affected lateralization and magnitude of evoked blood oxygen level-dependent responses across different auditory cortical fields (ACFs). Regardless of ear of stimulation, NH showed larger contralateral responses in several ACFs. With right ear stimulation in UHL, ipsilateral responses were larger compared to NH in core and belt ACFs, indicating neuroplasticity in the right hemisphere. With left ear stimulation in UHL, only posterior core ACFs showed larger ipsilateral responses, suggesting that most ACFs in the left hemisphere had greater resilience against reduced crossed inputs from a deafferented right ear. Parabelt regions located posterolateral to core and belt auditory cortex showed reduced activation in UHL compared to NH irrespective of RE/LE stimulation and lateralization of inputs. Thus, the effect in UHL compared to NH differed by ACF and ear of deafness. PMID:22502976

  8. Structural Transformation of the Amyloidogenic Core Region of TDP-43 Protein Initiates Its Aggregation and Cytoplasmic Inclusion*

    PubMed Central

    Jiang, Lei-Lei; Che, Mei-Xia; Zhao, Jian; Zhou, Chen-Jie; Xie, Mu-Yun; Li, Hai-Yin; He, Jian-Hua; Hu, Hong-Yu

    2013-01-01

    TDP-43 (TAR DNA-binding protein of 43 kDa) is a major deposited protein in amyotrophic lateral sclerosis and frontotemporal dementia with ubiquitin. A great number of genetic mutations identified in the flexible C-terminal region are associated with disease pathologies. We investigated the molecular determinants of TDP-43 aggregation and its underlying mechanisms. We identified a hydrophobic patch (residues 318–343) as the amyloidogenic core essential for TDP-43 aggregation. Biophysical studies demonstrated that the homologous peptide formed a helix-turn-helix structure in solution, whereas it underwent structural transformation from an α-helix to a β-sheet during aggregation. Mutation or deletion of this core region significantly reduced the aggregation and cytoplasmic inclusions of full-length TDP-43 (or TDP-35 fragment) in cells. Thus, structural transformation of the amyloidogenic core initiates the aggregation and cytoplasmic inclusion formation of TDP-43. This particular core region provides a potential therapeutic target to design small-molecule compounds for mitigating TDP-43 proteinopathies. PMID:23689371

  9. The Regional Patterns of Chemical Composition in the Otolith Core of Larval Fish

    NASA Astrophysics Data System (ADS)

    Chang, M. Y.; Geffen, A. J.; Nash, R. D. M.; Clemmesen, C.

    2012-04-01

    The elemental composition of fish otoliths can record the environmental information because once a trace element is deposited in the otolith; it presents a permanent record of the environmental conditions experienced by the fish at a particular time. The elemental signature of the otolith nucleus, the area lying within the first annual growth ring, is likely to be characteristic of the nursery areas of the species, and could be used as biological tracer for tracking origin and dispersal. However, ocean acidification may alter otolith growth and element incorporation, and it is important to establish baseline information about the sources of variation - both biotic and abiotic. The objectives of this study, as part of the wider CalMarO network, is to examine the regional differences in the otolith cores of selected fish species, contrast these differences with those measured between these same species in areas where their larvae co-exist and to find out the maternal effect to the chemical composition during the first forming of otoliths. The laboratory and field experiments were included to produce otolith material reflecting the maternal and regional patterns. Otolith composition was measured using laser-ablation ICPMS. For clarifying the regional patterns, juveniles from six locations and seven spawning groups along the west of the British Isles and larvae from the North Sea were sampled to distinguish the origin of spawning herring. There are three main nursery-ground groups, the Irish Sea, Scottish sea lochs and the Minch, contributing to the spawning herring in the west of the British Isles according to the otolith elemental composition data. However, the spawning origin of the North Sea herring larvae was still unclear. The otolith concentrations of Li, Na, Mg, Mn, Cu, Ru and Sr were significantly different among nursery-ground populations. Together with length-at-age data, at least two nursery-ground groups contributed to each spawning population. The

  10. Electrosprayed core-shell polymer-lipid nanoparticles for active component delivery

    NASA Astrophysics Data System (ADS)

    Eltayeb, Megdi; Stride, Eleanor; Edirisinghe, Mohan

    2013-11-01

    A key challenge in the production of multicomponent nanoparticles for healthcare applications is obtaining reproducible monodisperse nanoparticles with the minimum number of preparation steps. This paper focus on the use of electrohydrodynamic (EHD) techniques to produce core-shell polymer-lipid structures with a narrow size distribution in a single step process. These nanoparticles are composed of a hydrophilic core for active component encapsulation and a lipid shell. It was found that core-shell nanoparticles with a tunable size range between 30 and 90 nm and a narrow size distribution could be reproducibly manufactured. The results indicate that the lipid component (stearic acid) stabilizes the nanoparticles against collapse and aggregation and improves entrapment of active components, in this case vanillin, ethylmaltol and maltol. The overall structure of the nanoparticles produced was examined by multiple methods, including transmission electron microscopy and differential scanning calorimetry, to confirm that they were of core-shell form.

  11. Electrosprayed core-shell polymer-lipid nanoparticles for active component delivery.

    PubMed

    Eltayeb, Megdi; Stride, Eleanor; Edirisinghe, Mohan

    2013-11-22

    A key challenge in the production of multicomponent nanoparticles for healthcare applications is obtaining reproducible monodisperse nanoparticles with the minimum number of preparation steps. This paper focus on the use of electrohydrodynamic (EHD) techniques to produce core-shell polymer-lipid structures with a narrow size distribution in a single step process. These nanoparticles are composed of a hydrophilic core for active component encapsulation and a lipid shell. It was found that core-shell nanoparticles with a tunable size range between 30 and 90 nm and a narrow size distribution could be reproducibly manufactured. The results indicate that the lipid component (stearic acid) stabilizes the nanoparticles against collapse and aggregation and improves entrapment of active components, in this case vanillin, ethylmaltol and maltol. The overall structure of the nanoparticles produced was examined by multiple methods, including transmission electron microscopy and differential scanning calorimetry, to confirm that they were of core-shell form.

  12. Dye-Sensitized Core/Active Shell Upconversion Nanoparticles for Optogenetics and Bioimaging Applications.

    PubMed

    Wu, Xiang; Zhang, Yuanwei; Takle, Kendra; Bilsel, Osman; Li, Zhanjun; Lee, Hyungseok; Zhang, Zijiao; Li, Dongsheng; Fan, Wei; Duan, Chunying; Chan, Emory M; Lois, Carlos; Xiang, Yang; Han, Gang

    2016-01-26

    Near-infrared (NIR) dye-sensitized upconversion nanoparticles (UCNPs) can broaden the absorption range and boost upconversion efficiency of UCNPs. Here, we achieved significantly enhanced upconversion luminescence in dye-sensitized core/active shell UCNPs via the doping of ytterbium ions (Yb(3+)) in the UCNP shell, which bridged the energy transfer from the dye to the UCNP core. As a result, we synergized the two most practical upconversion booster effectors (dye-sensitizing and core/shell enhancement) to amplify upconversion efficiency. We demonstrated two biomedical applications using these UCNPs. By using dye-sensitized core/active shell UCNP embedded poly(methyl methacrylate) polymer implantable systems, we successfully shifted the optogenetic neuron excitation window to a biocompatible and deep tissue penetrable 800 nm wavelength. Furthermore, UCNPs were water-solubilized with Pluronic F127 with high upconversion efficiency and can be imaged in a mouse model.

  13. Dye-Sensitized Core/Active Shell Upconversion Nanoparticles for Optogenetics and Bioimaging Applications

    DOE PAGES

    Wu, Xiang; Zhang, Yuanwei; Takle, Kendra; ...

    2016-01-06

    A near-infrared (NIR) dye-sensitized upconversion nanoparticles (UCNPs) can broaden the absorption range and boost upconversion efficiency of UCNPs. We achieved significantly enhanced upconversion luminescence in dye-sensitized core/active shell UCNPs via the doping of ytterbium ions (Yb 3+ ) in the UCNP shell, which bridged the energy transfer from the dye to the UCNP core. As a result, we synergized the two most practical upconversion booster effectors (dye-sensitizing and core/shell enhancement) to amplify upconversion efficiency. We also demonstrated two biomedical applications using these UCNPs. By using dye-sensitized core/active shell UCNP embedded poly(methyl methacrylate) polymer implantable systems, we successfully shifted the optogeneticmore » neuron excitation window to a biocompatible and deep tissue penetrable 800 nm wavelength. Furthermore, UCNPs were water-solubilized with Pluronic F127 with high upconversion efficiency and can be imaged in a mouse model.« less

  14. Dye-Sensitized Core/Active Shell Upconversion Nanoparticles for Optogenetics and Bioimaging Applications

    SciTech Connect

    Wu, Xiang; Zhang, Yuanwei; Takle, Kendra; Bilsel, Osman; Li, Zhanjun; Lee, Hyungseok; Zhang, Zijiao; Li, Dongsheng; Fan, Wei; Duan, Chunying; Chan, Emory M.; Lois, Carlos; Xiang, Yang; Han, Gang

    2016-01-06

    A near-infrared (NIR) dye-sensitized upconversion nanoparticles (UCNPs) can broaden the absorption range and boost upconversion efficiency of UCNPs. We achieved significantly enhanced upconversion luminescence in dye-sensitized core/active shell UCNPs via the doping of ytterbium ions (Yb 3+ ) in the UCNP shell, which bridged the energy transfer from the dye to the UCNP core. As a result, we synergized the two most practical upconversion booster effectors (dye-sensitizing and core/shell enhancement) to amplify upconversion efficiency. We also demonstrated two biomedical applications using these UCNPs. By using dye-sensitized core/active shell UCNP embedded poly(methyl methacrylate) polymer implantable systems, we successfully shifted the optogenetic neuron excitation window to a biocompatible and deep tissue penetrable 800 nm wavelength. Furthermore, UCNPs were water-solubilized with Pluronic F127 with high upconversion efficiency and can be imaged in a mouse model.

  15. Core-shell TiO2 microsphere with enhanced photocatalytic activity and improved lithium storage

    NASA Astrophysics Data System (ADS)

    Guo, Hong; Tian, Dongxue; Liu, Lixiang; Wang, Yapeng; Guo, Yuan; Yang, Xiangjun

    2013-05-01

    Inorganic hollow core-shell spheres have attracted considerable interest due to their singular properties and wide range of potential applications. Herein a novel facile generic strategy of combining template assisted and solvothermal alcoholysis is employed to prepare core-void-shell anatase TiO2 nanoparticle aggregates with an excellent photocatalytic activity, and enhanced lithium storage in large quantities. Amorphous carbon can be loaded on the TiO2 nanoparticles uniformly under a suitably formulated ethanol/water system in the solvothermal alcoholysis process, and the subsequent calcination results of the formation of core-shell-shell anatase TiO2 nanoparticle aggregates. The intrinsic core-void-shell nature as well as high porosity of the unique nanostructures contributes greatly to the superior photocatalytic activity and improved performance as anode materials for lithium ion batteries.

  16. Enhanced antibacterial activity of bimetallic gold-silver core-shell nanoparticles at low silver concentration

    NASA Astrophysics Data System (ADS)

    Banerjee, Madhuchanda; Sharma, Shilpa; Chattopadhyay, Arun; Ghosh, Siddhartha Sankar

    2011-12-01

    Herein we report the development of bimetallic Au@Ag core-shell nanoparticles (NPs) where gold nanoparticles (Au NPs) served as the seeds for continuous deposition of silver atoms on its surface. The core-shell structure and morphology were examined by UV-Vis spectroscopy, transmission electron microscopy (TEM), energy dispersive X-ray (EDX) analysis and X-ray diffraction (XRD). The core-shell NPs showed antibacterial activity against both Gram negative (Escherichia coli and Pseudomonas aeruginosa) and Gram positive (Enterococcus faecalis and Pediococcus acidilactici) bacteria at low concentration of silver present in the shell, with more efficacy against Gram negative bacteria. TEM and flow cytometric studies showed that the core-shell NPs attached to the bacterial surface and caused membrane damage leading to cell death. The enhanced antibacterial properties of Au@Ag core-shell NPs was possibly due to the more active silver atoms in the shell surrounding gold core due to high surface free energy of the surface Ag atoms owing to shell thinness in the bimetallic NP structure.Herein we report the development of bimetallic Au@Ag core-shell nanoparticles (NPs) where gold nanoparticles (Au NPs) served as the seeds for continuous deposition of silver atoms on its surface. The core-shell structure and morphology were examined by UV-Vis spectroscopy, transmission electron microscopy (TEM), energy dispersive X-ray (EDX) analysis and X-ray diffraction (XRD). The core-shell NPs showed antibacterial activity against both Gram negative (Escherichia coli and Pseudomonas aeruginosa) and Gram positive (Enterococcus faecalis and Pediococcus acidilactici) bacteria at low concentration of silver present in the shell, with more efficacy against Gram negative bacteria. TEM and flow cytometric studies showed that the core-shell NPs attached to the bacterial surface and caused membrane damage leading to cell death. The enhanced antibacterial properties of Au@Ag core-shell NPs was

  17. Neural encoding of psychomotor activation in the nucleus accumbens core, but not the shell, requires cannabinoid receptor signaling

    PubMed Central

    Morra, Joshua T.; Glick, Stanley D.; Cheer, Joseph F.

    2010-01-01

    The current study aimed to further elucidate the role of endocannabinoid signaling in methamphetamine-induced psychomotor activation. Rats were treated with bilateral, intracranial microinjections of the cannabinoid CB1 receptor antagonists rimonabant (1 μg; 1 μl) or AM251 (1 μg; 1 μl), or vehicle (1 μl), followed by intravenous methamphetamine (3 mg/kg). Antagonist pretreatment in the nucleus accumbens core, but not shell, attenuated methamphetamine-induced stereotypy, while treatment in either brain region had no effect on drug-induced locomotion. In a parallel experiment, we recorded multiple single-units in the nucleus accumbens of behaving rats treated with intravenous rimonabant (0.3 mg/kg) or vehicle, followed by methamphetamine (0.01, 0.1, 1, 3 mg/kg; cumulative dosing). We observed robust, phasic changes in neuronal firing time-locked to the onset of methamphetamine-induced locomotion and stereotypy. Stereotypy encoding was observed in the core and was attenuated by CB1 receptor antagonism, while locomotor correlates were observed uniformly across the accumbens and were not affected by rimonabant. Psychomotor activation encoding was expressed predominantly by putative fast-spiking interneurons. We therefore propose that endocannabinoid modulation of psychomotor activation is preferentially driven by CB1 receptor-dependent interneuron activity in the nucleus accumbens core. PMID:20371830

  18. A Conserved Hydrophobic Core in Gαi1 Regulates G Protein Activation and Release from Activated Receptor.

    PubMed

    Kaya, Ali I; Lokits, Alyssa D; Gilbert, James A; Iverson, T M; Meiler, Jens; Hamm, Heidi E

    2016-09-09

    G protein-coupled receptor-mediated heterotrimeric G protein activation is a major mode of signal transduction in the cell. Previously, we and other groups reported that the α5 helix of Gαi1, especially the hydrophobic interactions in this region, plays a key role during nucleotide release and G protein activation. To further investigate the effect of this hydrophobic core, we disrupted it in Gαi1 by inserting 4 alanine amino acids into the α5 helix between residues Gln(333) and Phe(334) (Ins4A). This extends the length of the α5 helix without disturbing the β6-α5 loop interactions. This mutant has high basal nucleotide exchange activity yet no receptor-mediated activation of nucleotide exchange. By using structural approaches, we show that this mutant loses critical hydrophobic interactions, leading to significant rearrangements of side chain residues His(57), Phe(189), Phe(191), and Phe(336); it also disturbs the rotation of the α5 helix and the π-π interaction between His(57) and Phe(189) In addition, the insertion mutant abolishes G protein release from the activated receptor after nucleotide binding. Our biochemical and computational data indicate that the interactions between α5, α1, and β2-β3 are not only vital for GDP release during G protein activation, but they are also necessary for proper GTP binding (or GDP rebinding). Thus, our studies suggest that this hydrophobic interface is critical for accurate rearrangement of the α5 helix for G protein release from the receptor after GTP binding.

  19. Resting-State Coupling between Core Regions within the Central-Executive and Salience Networks Contributes to Working Memory Performance.

    PubMed

    Fang, Xiaojing; Zhang, Yuanchao; Zhou, Yuan; Cheng, Luqi; Li, Jin; Wang, Yulin; Friston, Karl J; Jiang, Tianzi

    2016-01-01

    Previous studies investigated the distinct roles played by different cognitive regions and suggested that the patterns of connectivity of these regions are associated with working memory (WM). However, the specific causal mechanism through which the neuronal circuits that involve these brain regions contribute to WM is still unclear. Here, in a large sample of healthy young adults, we first identified the core WM regions by linking WM accuracy to resting-state functional connectivity with the bilateral dorsolateral prefrontal cortex (dLPFC; a principal region in the central-executive network, CEN). Then a spectral dynamic causal modeling (spDCM) analysis was performed to quantify the effective connectivity between these regions. Finally, the effective connectivity was correlated with WM accuracy to characterize the relationship between these connections and WM performance. We found that the functional connections between the bilateral dLPFC and the dorsal anterior cingulate cortex (dACC) and between the right dLPFC and the left orbital fronto-insular cortex (FIC) were correlated with WM accuracy. Furthermore, the effective connectivity from the dACC to the bilateral dLPFC and from the right dLPFC to the left FIC could predict individual differences in WM. Because the dACC and FIC are core regions of the salience network (SN), we inferred that the inter- and causal-connectivity between core regions within the CEN and SN is functionally relevant for WM performance. In summary, the current study identified the dLPFC-related resting-state effective connectivity underlying WM and suggests that individual differences in cognitive ability could be characterized by resting-state effective connectivity.

  20. Regional Tectonic Evolution of the Pioneer Metamorphic Core Complex, South-Central Idaho

    NASA Astrophysics Data System (ADS)

    LIU, R.; Leech, M. L.

    2016-12-01

    The Pioneer core complex (PCC) is one of lesser-studied Cordilleran metamorphic core complexes (MCCs) that is located north of Snake River Plain in Rocky Mountains. The PCC resides in a transitional zone separating Eocene MCCs to the north and Miocene MCCs to the south which is a key location to understand processes of subduction and continental rifting in western US. The project applied thermodynamic modeling, zircon U-Pb dating, and Ti-in-zircon and Ti-in-biotite thermometry to study the pressure-temperature-time-deformation (P-T-t-d) history of the PCC. Zircon ages from gneiss, granitic dike and quartzite are in Late Cretaceous to Early Eocene. The age of 109±4 Ma suggests that NE-SW D1 compression was on going 109 Ma. The ages of 83.9±5 and 85.6±1 Ma indicate that D2 compression was >86-84 Ma. The younger ages fall into 3 groups, 52 Ma, 48 Ma and 44 Ma. They indicate that NW-SE D3 extension and magmatism was ongoing 52 Ma and ceased 44 Ma; the emplacement of intrusive granodiorite at 48 Ma gave peak metamorphism of the PCC in upper amphibolite-facies. Ti-in-zircon thermometry calculated peak T of the PCC at 1100°C. Ti-in-biotite thermometry calculated peak T of biotite at 895°C and retrograde metamorphism following the path from 895°C down to 500°C finally. Thermodynamic modeling generated pseudosections of gneiss and phyllite on which the P-T-t-d path of the PCC follows a clockwise path that progrades to peak condition at 4 kbar, 850-900°C at 52-48 Ma, and followed by retrograde stage to 2 kbar, 500°C at 44 Ma. The metamorphic history of PCC started at >109 Ma (D1) in Late Cretaceous during the initiation of Sevier orogeny as the Farallon plate subducted at a shallow angle. Then the PCC underwent D2 Sevier compression 86-84 Ma when the Farallon plate became flat-subducting. However, due to lack of ages between 109 and 86 Ma, it is uncertain if D1 and D2 were one continuous event or two separate episodes in Pioneer region. Following the compression

  1. Structural basis of Cu, Zn-superoxide dismutase amyloid fibril formation involves interaction of multiple peptide core regions.

    PubMed

    Ida, Masataka; Ando, Mizuho; Adachi, Masayuki; Tanaka, Asumi; Machida, Kodai; Hongo, Kunihiro; Mizobata, Tomohiro; Yamakawa, Miho Yoshida; Watanabe, Yasuhiro; Nakashima, Kenji; Kawata, Yasushi

    2016-02-01

    Cu, Zn-superoxide dismutase (SOD1), an enzyme implicated in the progression of familial amyotrophic lateral sclerosis (fALS), forms amyloid fibrils under certain experimental conditions. As part of our efforts to understand ALS pathogenesis, in this study we found that reduction of the intramolecular disulfide bond destabilized the tertiary structure of metal free wild-type SOD1 and greatly enhanced fibril formation in vitro. We also identified fibril core peptides that are resistant to protease digestion by using mass spectroscopy and Edman degradation analyses. Three regions dispersed throughout the sequence were detected as fibril core sequences of SOD1. Interestingly, by using three synthetic peptides that correspond to these identified regions, we determined that each region was capable of fibril formation, either alone or in a mixture containing multiple peptides. It was also revealed that by reducing the disulfide bond and causing a decrease in the structural stability, the amyloid fibril formation of a familial mutant SOD1 G93A was accelerated even under physiological conditions. These results demonstrate that by destabilizing the structure of SOD1 by removing metal ions and breaking the intramolecular disulfide bridge, multiple fibril-forming core regions are exposed, which then interact with each another and form amyloid fibrils under physiological conditions.

  2. Structural basis of Cu, Zn-superoxide dismutase amyloid fibril formation involves interaction of multiple peptide core regions

    PubMed Central

    Ida, Masataka; Ando, Mizuho; Adachi, Masayuki; Tanaka, Asumi; Machida, Kodai; Hongo, Kunihiro; Mizobata, Tomohiro; Yamakawa, Miho Yoshida; Watanabe, Yasuhiro; Nakashima, Kenji; Kawata, Yasushi

    2016-01-01

    Cu, Zn-superoxide dismutase (SOD1), an enzyme implicated in the progression of familial amyotrophic lateral sclerosis (fALS), forms amyloid fibrils under certain experimental conditions. As part of our efforts to understand ALS pathogenesis, in this study we found that reduction of the intramolecular disulfide bond destabilized the tertiary structure of metal free wild-type SOD1 and greatly enhanced fibril formation in vitro. We also identified fibril core peptides that are resistant to protease digestion by using mass spectroscopy and Edman degradation analyses. Three regions dispersed throughout the sequence were detected as fibril core sequences of SOD1. Interestingly, by using three synthetic peptides that correspond to these identified regions, we determined that each region was capable of fibril formation, either alone or in a mixture containing multiple peptides. It was also revealed that by reducing the disulfide bond and causing a decrease in the structural stability, the amyloid fibril formation of a familial mutant SOD1 G93A was accelerated even under physiological conditions. These results demonstrate that by destabilizing the structure of SOD1 by removing metal ions and breaking the intramolecular disulfide bridge, multiple fibril-forming core regions are exposed, which then interact with each another and form amyloid fibrils under physiological conditions. PMID:26319711

  3. Modeling active galactic nucleus feedback in cool-core clusters: The balance between heating and cooling

    SciTech Connect

    Li, Yuan; Bryan, Greg L.

    2014-07-01

    We study the long-term evolution of an idealized cool-core galaxy cluster under the influence of momentum-driven active galactic nucleus (AGN) feedback using three-dimensional high-resolution (60 pc) adaptive mesh refinement simulations. The feedback is modeled with a pair of precessing jets whose power is calculated based on the accretion rate of the cold gas surrounding the supermassive black hole (SMBH). The intracluster medium first cools into clumps along the propagation direction of the jets. As the jet power increases, gas condensation occurs isotropically, forming spatially extended structures that resemble the observed Hα filaments in Perseus and many other cool-core clusters. Jet heating elevates the gas entropy, halting clump formation. The cold gas that is not accreted onto the SMBH settles into a rotating disk of ∼10{sup 11} M {sub ☉}. The hot gas cools directly onto the disk while the SMBH accretes from its innermost region, powering the AGN that maintains a thermally balanced state for a few Gyr. The mass cooling rate averaged over 7 Gyr is ∼30 M {sub ☉} yr{sup –1}, an order of magnitude lower than the classic cooling flow value. Medium resolution simulations produce similar results, while in low resolution runs, the cluster experiences cycles of gas condensation and AGN outbursts. Owing to its self-regulating mechanism, AGN feedback can successfully balance cooling with a wide range of model parameters. Our model also produces cold structures in early stages that are in good agreement with the observations. However, the long-lived massive cold disk is unrealistic, suggesting that additional physical processes are still needed.

  4. Statistical Analysis of Acoustic Wave Parameters Near Solar Active Regions

    NASA Astrophysics Data System (ADS)

    Rabello-Soares, M. Cristina; Bogart, Richard S.; Scherrer, Philip H.

    2016-08-01

    In order to quantify the influence of magnetic fields on acoustic mode parameters and flows in and around active regions, we analyze the differences in the parameters in magnetically quiet regions nearby an active region (which we call “nearby regions”), compared with those of quiet regions at the same disk locations for which there are no neighboring active regions. We also compare the mode parameters in active regions with those in comparably located quiet regions. Our analysis is based on ring-diagram analysis of all active regions observed by the Helioseismic and Magnetic Imager (HMI) during almost five years. We find that the frequency at which the mode amplitude changes from attenuation to amplification in the quiet nearby regions is around 4.2 mHz, in contrast to the active regions, for which it is about 5.1 mHz. This amplitude enhacement (the “acoustic halo effect”) is as large as that observed in the active regions, and has a very weak dependence on the wave propagation direction. The mode energy difference in nearby regions also changes from a deficit to an excess at around 4.2 mHz, but averages to zero over all modes. The frequency difference in nearby regions increases with increasing frequency until a point at which the frequency shifts turn over sharply, as in active regions. However, this turnover occurs around 4.9 mHz, which is significantly below the acoustic cutoff frequency. Inverting the horizontal flow parameters in the direction of the neigboring active regions, we find flows that are consistent with a model of the thermal energy flow being blocked directly below the active region.

  5. Variability in the Precore and Core Promoter Regions of HBV Strains in Morocco: Characterization and Impact on Liver Disease Progression

    PubMed Central

    Kitab, Bouchra; Essaid El Feydi, Abdellah; Afifi, Rajaa; Trepo, Christian; Benazzouz, Mustapha; Essamri, Wafaa; Zoulim, Fabien; Chemin, Isabelle; Alj, Hanane Salih; Ezzikouri, Sayeh; Benjelloun, Soumaya

    2012-01-01

    Background Hepatitis B virus (HBV) is one of the most common human pathogens that cause aggressive hepatitis and advanced liver disease (AdLD), including liver cirrhosis and Hepatocellular Carcinoma. The persistence of active HBV replication and liver damage after the loss of hepatitis B e antigen (HBeAg) has been frequently associated with mutations in the pre-core (pre-C) and core promoter (CP) regions of HBV genome that abolish or reduce HBeAg expression. The purpose of this study was to assess the prevalence of pre-C and CP mutations and their impact on the subsequent course of liver disease in Morocco. Methods/Principal Findings A cohort of 186 patients with HBeAg-negative chronic HBV infection was studied (81 inactive carriers, 69 with active chronic hepatitis, 36 with AdLD). Pre-C and CP mutations were analyzed by PCR-direct sequencing method. The pre-C stop codon G1896A mutation was the most frequent (83.9%) and was associated with a lower risk of AdLD development (OR, 0.4; 95% CI, 0.15–1.04; p = 0.04). HBV-DNA levels in patients with G1896A were not significantly different from the other patients carrying wild-type strains (p = 0.84). CP mutations C1653T, T1753V, A1762T/G1764A, and C1766T/T1768A were associated with higher HBV-DNA level and increased liver disease severity. Multiple logistic regression analysis showed that older age (≥40 years), male sex, high viral load (>4.3 log10 IU/mL) and CP mutations C1653T, T1753V, A1762T/G1764A, and C1766T/T1768A were independent risk factors for AdLD development. Combination of these mutations was significantly associated with AdLD (OR, 7.52; 95% CI, 4.8–8; p<0.0001). Conclusions This study shows for the first time the association of HBV viral load and CP mutations with the severity of liver disease in Moroccan HBV chronic carriers. The examination of CP mutations alone or in combination could be helpful for prediction of the clinical outcome. PMID:22905181

  6. The Formation of Glycine in Hot Cores: New Gas-grain Chemical Simulations of Star-forming Regions

    NASA Astrophysics Data System (ADS)

    Garrod, Robin

    2012-07-01

    Organic molecules of increasing complexity have been detected in the warm envelopes of star-forming cores, commonly referred to as "hot cores". Spectroscopic searches at mm/sub-mm wavelengths have uncovered both amines and carboxylic acids in these regions, as well as a range of other compounds including alcohols, ethers, esters, and nitriles. However, the simplest amino acid, glycine (NH2CH2COOH), has not yet been reliably detected in the ISM. There has been much interest in this molecule, due to its importance to the formation of proteins, and to life, while the positive identification of interstellar molecules of similar or greater complexity suggests that its existence in star-forming regions is plausible. I will present the results of recent models of hot-core chemistry that simulate the formation of both simple and complex molecules on the surfaces or within the ice mantles of dust grains. I will also present results from the first gas-grain astrochemical model to approach the question of amino-acid formation in hot cores. The formation of glycine in moderate abundance is found to be as efficient as that for similarly complex species, while its sublimation from the grains occurs at somewhat higher temperatures. However, simulated emission spectra based on the model results show that the degree of compactness of high-abundance regions, and the density and temperature profiles of the cores may be the key variables affecting the future detection of glycine, as well as other amino acids, and may explain its non-detection to date.

  7. Bi-functional optimization of actively cooled, pressurized hollow sandwich cylinders with prismatic cores

    NASA Astrophysics Data System (ADS)

    Liu, T.; Deng, Z. C.; Lu, T. J.

    2007-12-01

    All metallic, hollow sandwich cylinders having ultralight two-dimensional (2D) prismatic cores are optimally designed for maximum thermo-mechanical performance at minimum mass. The heated cylinder is subjected to uniform internal pressure and actively cooled by forced air convection. The use of two different core topologies is exploited: square- and triangular-celled cores. The minimum mass design model is so defined that three failure modes are prevented: facesheet yielding, core member yielding, and core member buckling. The intersection-of-asymptotes method, in conjunction with the fin analogy model, is employed to build the optimization model for maximum heat transfer rate. A non-dimensional parameter is introduced to couple the two objectives—structural and thermal—in a single cost function. It is found that the geometry corresponding to maximum heat transfer rate is not unique, and square-celled core sandwich cylinders outperform those having triangular cells. The eight-layered sandwich cylinders with square cells have the best overall performance in comparison with other core topologies. Whilst a sandwich cylinder with shorter length is preferred for enhanced thermo-mechanical performance, the influence of the outer radius of the cylinder is rather weak.

  8. Conformational stability of mammalian prion protein amyloid fibrils is dictated by a packing polymorphism within the core region.

    PubMed

    Cobb, Nathan J; Apostol, Marcin I; Chen, Shugui; Smirnovas, Vytautas; Surewicz, Witold K

    2014-01-31

    Mammalian prion strains are believed to arise from the propagation of distinct conformations of the misfolded prion protein PrP(Sc). One key operational parameter used to define differences between strains has been conformational stability of PrP(Sc) as defined by resistance to thermal and/or chemical denaturation. However, the structural basis of these stability differences is unknown. To bridge this gap, we have generated two strains of recombinant human prion protein amyloid fibrils that show dramatic differences in conformational stability and have characterized them by a number of biophysical methods. Backbone amide hydrogen/deuterium exchange experiments revealed that, in sharp contrast to previously studied strains of infectious amyloid formed from the yeast prion protein Sup35, differences in β-sheet core size do not underlie differences in conformational stability between strains of mammalian prion protein amyloid. Instead, these stability differences appear to be dictated by distinct packing arrangements (i.e. steric zipper interfaces) within the amyloid core, as indicated by distinct x-ray fiber diffraction patterns and large strain-dependent differences in hydrogen/deuterium exchange kinetics for histidine side chains within the core region. Although this study was limited to synthetic prion protein amyloid fibrils, a similar structural basis for strain-dependent conformational stability may apply to brain-derived PrP(Sc), especially because large strain-specific differences in PrP(Sc) stability are often observed despite a similar size of the PrP(Sc) core region.

  9. Static and Impulsive Models of Solar Active Regions

    NASA Technical Reports Server (NTRS)

    Patsourakos, S.; Klimchuk, James A.

    2008-01-01

    The physical modeling of active regions (ARs) and of the global coronal is receiving increasing interest lately. Recent attempts to model ARs using static equilibrium models were quite successful in reproducing AR images of hot soft X-ray (SXR) loops. They however failed to predict the bright EUV warm loops permeating ARs: the synthetic images were dominated by intense footpoint emission. We demonstrate that this failure is due to the very weak dependence of loop temperature on loop length which cannot simultaneously account for both hot and warm loops in the same AR. We then consider time-dependent AR models based on nanoflare heating. We demonstrate that such models can simultaneously reproduce EUV and SXR loops in ARs. Moreover, they predict radial intensity variations consistent with the localized core and extended emissions in SXR and EUV AR observations respectively. We finally show how the AR morphology can be used as a gauge of the properties (duration, energy, spatial dependence, repetition time) of the impulsive heating.

  10. Active Region Emission Measure Distributions and Implications for Nanoflare Heating

    NASA Astrophysics Data System (ADS)

    Cargill, P. J.

    2014-03-01

    The temperature dependence of the emission measure (EM) in the core of active regions coronal loops is an important diagnostic of heating processes. Observations indicate that EM(T) ~ Ta below approximately 4 MK, with 2 < a < 5. Zero-dimensional hydrodynamic simulations of nanoflare trains are used to demonstrate the dependence of a on the time between individual nanoflares (TN ) and the distribution of nanoflare energies. If TN is greater than a few thousand seconds, a < 3. For smaller values, trains of equally spaced nanoflares cannot account for the observed range of a if the distribution of nanoflare energies is either constant, randomly distributed, or a power law. Power law distributions where there is a delay between consecutive nanoflares proportional to the energy of the second nanoflare do lead to the observed range of a. However, TN must then be of the order of hundreds to no more than a few thousand seconds. If a nanoflare leads to the relaxation of a stressed coronal field to a near-potential state, the time taken to build up the required magnetic energy is thus too long to account for the EM measurements. Instead, it is suggested that a nanoflare involves the relaxation from one stressed coronal state to another, dissipating only a small fraction of the available magnetic energy. A consequence is that nanoflare energies may be smaller than previously envisioned.

  11. Active region emission measure distributions and implications for nanoflare heating

    SciTech Connect

    Cargill, P. J.

    2014-03-20

    The temperature dependence of the emission measure (EM) in the core of active regions coronal loops is an important diagnostic of heating processes. Observations indicate that EM(T) ∼ T{sup a} below approximately 4 MK, with 2 < a < 5. Zero-dimensional hydrodynamic simulations of nanoflare trains are used to demonstrate the dependence of a on the time between individual nanoflares (T{sub N} ) and the distribution of nanoflare energies. If T{sub N} is greater than a few thousand seconds, a < 3. For smaller values, trains of equally spaced nanoflares cannot account for the observed range of a if the distribution of nanoflare energies is either constant, randomly distributed, or a power law. Power law distributions where there is a delay between consecutive nanoflares proportional to the energy of the second nanoflare do lead to the observed range of a. However, T{sub N} must then be of the order of hundreds to no more than a few thousand seconds. If a nanoflare leads to the relaxation of a stressed coronal field to a near-potential state, the time taken to build up the required magnetic energy is thus too long to account for the EM measurements. Instead, it is suggested that a nanoflare involves the relaxation from one stressed coronal state to another, dissipating only a small fraction of the available magnetic energy. A consequence is that nanoflare energies may be smaller than previously envisioned.

  12. Carbon-Supported IrNi Core-Shell Nanoparticles: Synthesis Characterization and Catalytic Activity

    SciTech Connect

    K Sasaki; K Kuttiyiel; L Barrio; D Su; A Frenkel; N Marinkovic; D Mahajan; R Adzic

    2011-12-31

    We synthesized carbon-supported IrNi core-shell nanoparticles by chemical reduction and subsequent thermal annealing in H{sub 2}, and verified the formation of Ir shells on IrNi solid solution alloy cores by various experimental methods. The EXAFS analysis is consistent with the model wherein the IrNi nanoparticles are composed of two-layer Ir shells and IrNi alloy cores. In situ XAS revealed that the Ir shells completely protect Ni atoms in the cores from oxidation or dissolution in an acid electrolyte under elevated potentials. The formation of Ir shell during annealing due to thermal segregation is monitored by time-resolved synchrotron XRD measurements, coupled with Rietveld refinement analyses. The H{sub 2} oxidation activity of the IrNi nanoparticles was found to be higher than that of a commercial Pt/C catalyst. This is predominantly due to Ni-core-induced Ir shell contraction that makes the surface less reactive for IrOH formation, and the resulting more metallic Ir surface becomes more active for H{sub 2} oxidation. This new class of core-shell nanoparticles appears promising for application as hydrogen anode fuel cell electrocatalysts.

  13. Multiple-shell ZnSe core-shell spheres and their improved photocatalytic activity.

    PubMed

    Zhao, Lijuan; Sun, Chengcheng; Tian, Gang; Pang, Qi

    2017-09-15

    Multiple-shell ZnSe core-shell microspheres were synthesized on a large scale by a facile solvothermal method in ethylene glycol (EG) with ethylene diamine tetraacetic acid (EDTA) assisted. X-ray diffraction (XRD), scanning electron microscopy (SEM), transmission electron microscopy (TEM), UV-vis absorption spectroscopy and photoluminescence (PL) were used to characterize the structures and optical properties of these core-shell spheres with multiple shells. XRD and SEM analyses show that the as-grown ZnSe samples are zinc-blende core-shell structures with multiple shells. The possible growth mechanism is investigated. The results of photocatalysis of methyl red (MR) indicate that the multiple-shell ZnSe core-shell microspheres possess remarkable photocatalytic activity. Copyright © 2017 Elsevier Inc. All rights reserved.

  14. Comparison and analysis of subglacial bedrock core drilling technology in Polar Regions

    NASA Astrophysics Data System (ADS)

    Wang, Jinsong; Cao, PinLu; Liu, ChunPeng; Talalay, P. G.

    2015-06-01

    The Gamburtsev Mountains, located in East Antarctica, is the direct geomorphological cause of the formation of Dome A. Drilling the core of the Gamburtsev subglacial mountains is one of the primary goals of modern polar research, which is important to understand its formation and evolution process, the ice sheet formation of Dome A, glacial motion, climate change, and so on. This paper describes the status and progress of subglacial bedrock drilling technology. Existing subglacial bedrock drilling technologies are also discussed, including common rig rotary drilling, wire-line core drilling, coiled tubing drilling, and electromechanical drilling. Results of this paper will provide valuable information for Chinese subglacial bedrock core drilling project in the Gamburtsev mountains.

  15. Paralleling power MOSFETs in their active region: Extended range of passively forced current sharing

    NASA Technical Reports Server (NTRS)

    Niedra, Janis M.

    1989-01-01

    A simple passive circuit that improves current balance in parallelled power MOSFETs that are not precisely matched and that are operated in their active region from a common gate drive are exhibited. A nonlinear circuit consisting of diodes and resistors generates the differential gate potential required to correct for unbalance while maintaining low losses over a range of current. Also application of a thin tape wound magnetic core to effect dynamic current balance is reviewed, and a simple theory is presented showing that for operation in the active region the branch currents tend to revert to their normal unbalanced values even if the core is not driven into saturation. Results of several comparative experiments are given.

  16. Are All Beliefs Equal? Implicit Belief Attributions Recruiting Core Brain Regions of Theory of Mind

    PubMed Central

    Gergely, György; Csibra, Gergely; Brass, Marcel

    2014-01-01

    Humans possess efficient mechanisms to behave adaptively in social contexts. They ascribe goals and beliefs to others and use these for behavioural predictions. Researchers argued for two separate mental attribution systems: an implicit and automatic one involved in online interactions, and an explicit one mainly used in offline deliberations. However, the underlying mechanisms of these systems and the types of beliefs represented in the implicit system are still unclear. Using neuroimaging methods, we show that the right temporo-parietal junction and the medial prefrontal cortex, brain regions consistently found to be involved in explicit mental state reasoning, are also recruited by spontaneous belief tracking. While the medial prefrontal cortex was more active when both the participant and another agent believed an object to be at a specific location, the right temporo-parietal junction was selectively activated during tracking the false beliefs of another agent about the presence, but not the absence of objects. While humans can explicitly attribute to a conspecific any possible belief they themselves can entertain, implicit belief tracking seems to be restricted to beliefs with specific contents, a content selectivity that may reflect a crucial functional characteristic and signature property of implicit belief attribution. PMID:25259625

  17. Are all beliefs equal? Implicit belief attributions recruiting core brain regions of theory of mind.

    PubMed

    Kovács, Agnes Melinda; Kühn, Simone; Gergely, György; Csibra, Gergely; Brass, Marcel

    2014-01-01

    Humans possess efficient mechanisms to behave adaptively in social contexts. They ascribe goals and beliefs to others and use these for behavioural predictions. Researchers argued for two separate mental attribution systems: an implicit and automatic one involved in online interactions, and an explicit one mainly used in offline deliberations. However, the underlying mechanisms of these systems and the types of beliefs represented in the implicit system are still unclear. Using neuroimaging methods, we show that the right temporo-parietal junction and the medial prefrontal cortex, brain regions consistently found to be involved in explicit mental state reasoning, are also recruited by spontaneous belief tracking. While the medial prefrontal cortex was more active when both the participant and another agent believed an object to be at a specific location, the right temporo-parietal junction was selectively activated during tracking the false beliefs of another agent about the presence, but not the absence of objects. While humans can explicitly attribute to a conspecific any possible belief they themselves can entertain, implicit belief tracking seems to be restricted to beliefs with specific contents, a content selectivity that may reflect a crucial functional characteristic and signature property of implicit belief attribution.

  18. DUST CONTINUUM AND POLARIZATION FROM ENVELOPE TO CORES IN STAR FORMATION: A CASE STUDY IN THE W51 NORTH REGION

    SciTech Connect

    Tang, Ya-Wen; Guilloteau, Stephane; Dutrey, Anne; Ho, Paul T. P.; Koch, Patrick M.

    2013-02-15

    We present the first high-angular resolution (up to 0.''7, {approx}5000 AU) polarization and thermal dust continuum images toward the massive star-forming region W51 North. The observations were carried out with the Submillimeter Array (SMA) in both the subcompact (SMA-SubC) and extended (SMA-Ext) configurations at a wavelength of 870 {mu}m. W51 North is resolved into four cores (SMA1 to SMA4) in the 870 {mu}m continuum image. The associated dust polarization exhibits more complex structures than seen at lower angular resolution. We analyze the inferred morphologies of the plane-of-sky magnetic field (B ) in the SMA1 to SMA4 cores and in the envelope using the SMA-Ext and SMA-SubC data. These results are compared with the B archive images obtained from the Caltech Submillimeter Observatory (CSO) and James Clerk Maxwell Telescope (JCMT). The polarization percentage is about 1% to 4%, and it is found to decrease with higher intensity in our SMA images, which is a similar trend to that previously reported in the CSO and JCMT data. A correlation between dust intensity gradient position angles ({phi}{sub {nabla}I}) and magnetic field position angles ({phi}{sub B}) is found in the CSO, JCMT, and both SMA data sets. This correlation is further analyzed quantitatively. A systematically tighter correlation between {phi}{sub {nabla}I} and {phi}{sub B} is found in the cores, whereas the correlation decreases in outside-core regions. Magnetic field-to-gravity force ratio ({Sigma}{sub B}) maps are derived using the newly developed polarization-intensity gradient method by Koch et al. We find that the force ratios tend to be small ({Sigma}{sub B} {approx}< 0.5) in the cores in all four data sets. In regions outside of the cores, the ratios increase or the field is even dominating gravity ({Sigma}{sub B} > 1). This possibly provides a physical explanation of the tightening correlation between {phi}{sub {nabla}I} and {phi}{sub B} in the cores: The more the B field lines are

  19. GalaxyTBM: template-based modeling by building a reliable core and refining unreliable local regions.

    PubMed

    Ko, Junsu; Park, Hahnbeom; Seok, Chaok

    2012-08-10

    Protein structures can be reliably predicted by template-based modeling (TBM) when experimental structures of homologous proteins are available. However, it is challenging to obtain structures more accurate than the single best templates by either combining information from multiple templates or by modeling regions that vary among templates or are not covered by any templates. We introduce GalaxyTBM, a new TBM method in which the more reliable core region is modeled first from multiple templates and less reliable, variable local regions, such as loops or termini, are then detected and re-modeled by an ab initio method. This TBM method is based on "Seok-server," which was tested in CASP9 and assessed to be amongst the top TBM servers. The accuracy of the initial core modeling is enhanced by focusing on more conserved regions in the multiple-template selection and multiple sequence alignment stages. Additional improvement is achieved by ab initio modeling of up to 3 unreliable local regions in the fixed framework of the core structure. Overall, GalaxyTBM reproduced the performance of Seok-server, with GalaxyTBM and Seok-server resulting in average GDT-TS of 68.1 and 68.4, respectively, when tested on 68 single-domain CASP9 TBM targets. For application to multi-domain proteins, GalaxyTBM must be combined with domain-splitting methods. Application of GalaxyTBM to CASP9 targets demonstrates that accurate protein structure prediction is possible by use of a multiple-template-based approach, and ab initio modeling of variable regions can further enhance the model quality.

  20. Active core profile and transport modification by application of Ion Bernstein Wave power in PBX-M

    SciTech Connect

    LeBlanc, B.; Bell, R.; Batha, S.

    1995-01-01

    Application of Ion Bernstein Wave Heating (IBWH) into the Princeton Beta Experiment-Modification (PBX-M) tokamak stabilizes sawtooth oscillations and generates peaked density profiles. A transport barrier, spatially correlated with the IBWH power deposition profile, is observed in the core of IBWH assisted neutral beam injection (NBI) discharges. A precursor to the fully developed barrier is seen in the soft x-ray data during edge localized mode (ELM) activity. Sustained IBWH operation is conducive to a regime where the barrier supports large {triangledown}n{sub e}, {triangledown}T{sub e}, {triangledown}v{sub phi}, and {triangledown}T{sub i}, delimiting the confinement zone. This regime is reminiscent of the H(high)-mode but with a confinement zone moved inwards. The core region has better than H-mode confinement while the peripheral region is L(low)-mode-like. The peaked profile enhanced NBI core deposition and increases nuclear reactivity. An increase in central T{sub i} results from {chi}{sub i} reduction (compared to H-mode) and better beam penetration. Bootstrap current fractions of up to 0.32--0.35 locally and 0.28 overall were obtained when an additional NBI burst is applied to this plasma.

  1. Active core profile and transport modification by application of ion Bernstein wave power in the Princeton Beta Experiment-Modification

    NASA Astrophysics Data System (ADS)

    LeBlanc, B.; Batha, S.; Bell, R.; Bernabei, S.; Blush, L.; de la Luna, E.; Doerner, R.; Dunlap, J.; England, A.; Garcia, I.; Ignat, D.; Isler, R.; Jones, S.; Kaita, R.; Kaye, S.; Kugel, H.; Levinton, F.; Luckhardt, S.; Mutoh, T.; Okabayashi, M.; Ono, M.; Paoletti, F.; Paul, S.; Petravich, G.; Post-Zwicker, A.; Sauthoff, N.; Schmitz, L.; Sesnic, S.; Takahashi, H.; Talvard, M.; Tighe, W.; Tynan, G.; von Goeler, S.; Woskov, P.; Zolfaghari, A.

    1995-03-01

    Application of Ion Bernstein Wave Heating (IBWH) into the Princeton Beta Experiment-Modification (PBX-M) [Phys. Fluids B 2, 1271 (1990)] tokamak stabilizes sawtooth oscillations and generates peaked density profiles. A transport barrier, spatially correlated with the IBWH power deposition profile, is observed in the core of IBWH-assisted neutral beam injection (NBI) discharges. A precursor to the fully developed barrier is seen in the soft x-ray data during edge localized mode (ELM) activity. Sustained IBWH operation is conducive to a regime where the barrier supports large ∇ne, ∇Te, ∇νφ, and ∇Ti, delimiting the confinement zone. This regime is reminiscent of the H(high) mode, but with a confinement zone moved inward. The core region has better than H-mode confinement while the peripheral region is L(low)-mode-like. The peaked profile enhances NBI core deposition and increases nuclear reactivity. An increase in central Ti results from χi reduction (compared to the H mode) and better beam penetration. Bootstrap current fractions of up to 0.32-0.35 locally and 0.28 overall were obtained when an additional NBI burst is applied to this plasma.

  2. Identifying regions of strong scattering at the core-mantle boundary from analysis of PKKP precursor energy

    USGS Publications Warehouse

    Rost, S.; Earle, P.S.

    2010-01-01

    We detect seismic scattering from the core-mantle boundary related to the phase PKKP (PK. KP) in data from small aperture seismic arrays in India and Canada. The detection of these scattered waves in data from small aperture arrays is new and allows a better characterization of the fine-scale structure of the deep Earth especially in the southern hemisphere. Their slowness vector is determined from array processing allowing location of the heterogeneities at the core-mantle boundary using back-projection techniques through 1D Earth models. We identify strong scattering at the core-mantle boundary (CMB) beneath the Caribbean, Patagonia and the Antarctic Peninsula as well as beneath southern Africa. An analysis of the scattering regions relative to sources and receivers indicates that these regions represent areas of increased scattering likely due to increased heterogeneities close to the CMB. The 1. Hz array data used in this study is most sensitive to heterogeneity with scale lengths of about 10. km. Given the small size of the scatterers, a chemical origin of the heterogeneities is likely. By comparing the location of the fine-scale heterogeneity to geodynamical models and tomographic images, we identify different scattering mechanisms in regions related to subduction (Caribbean and Patagonia) and dense thermo chemical piles (Southern Africa). ?? 2010 Elsevier B.V.

  3. Cloning of the 5' regulatory regions and functional characterization of the core promoters of ovine PLAU (u-PA) and SERPIN1 (PAI-1).

    PubMed

    Lampidonis, A D; Theodorou, G; Pecorini, C; Rebucci, R; Baldi, A; Politis, I

    2011-12-01

    The activation of plasminogen plays a crucial role in various extracellular proteolytic events (fibrinolysis, cell migration, ovulation and involution of the mammary gland). In the present study we describe the isolation of the 5' proximal and distal promoter regions of ovine PLAU (urokinase plasminogen activator, u-PA) and SERPIN1 (plasminogen activator inhibitor 1, PAI-1) genes for the first time in ruminants. Analysis of the 5.645kb 5'-flanking region of u-PA revealed a putative TATA-less promoter. In contrast the isolated 2.787kb 5'-flanking region of PAI-1 included a TATA-box. It should be noted that both genes lack the initiator motif around the transcription start site. The two genes share a number of transcription factor binding sites, namely Nuclear Factor-kappa B, Stimulating Protein 1 and Activating protein 1, suggesting co-expression of the two genes. Moreover, additional, not shared, transcription factor binding sites were identified in u-PA and PAI-1. More important of these are the cis-regulatory elements for plasminogen activator inhibitor 2 located in the distal promoter region of u-PA, suggesting an involvement of the other specific inhibitor in the regulation of ovine u-PA gene expression, and the three stress response elements sites present in the proximal and distal promoter of PAI-1. Different genomic fragments of the two 5' flanking regions were directionally cloned into a suitable reporter vector upstream of a promoter-less luciferase gene. Transient transfection into bovine mammary epithelial (BME-UV) cells demonstrated that the regions of -384/+27 and -382/+22 for the u-PA and PAI-1genes, respectively, potentially function as core promoter regions.

  4. Image patch analysis of sunspots and active regions. I. Intrinsic dimension and correlation analysis

    NASA Astrophysics Data System (ADS)

    Moon, Kevin R.; Li, Jimmy J.; Delouille, Véronique; De Visscher, Ruben; Watson, Fraser; Hero, Alfred O.

    2016-01-01

    Context. The flare productivity of an active region is observed to be related to its spatial complexity. Mount Wilson or McIntosh sunspot classifications measure such complexity but in a categorical way, and may therefore not use all the information present in the observations. Moreover, such categorical schemes hinder a systematic study of an active region's evolution for example. Aims: We propose fine-scale quantitative descriptors for an active region's complexity and relate them to the Mount Wilson classification. We analyze the local correlation structure within continuum and magnetogram data, as well as the cross-correlation between continuum and magnetogram data. Methods: We compute the intrinsic dimension, partial correlation, and canonical correlation analysis (CCA) of image patches of continuum and magnetogram active region images taken from the SOHO-MDI instrument. We use masks of sunspots derived from continuum as well as larger masks of magnetic active regions derived from magnetogram to analyze separately the core part of an active region from its surrounding part. Results: We find relationships between the complexity of an active region as measured by its Mount Wilson classification and the intrinsic dimension of its image patches. Partial correlation patterns exhibit approximately a third-order Markov structure. CCA reveals different patterns of correlation between continuum and magnetogram within the sunspots and in the region surrounding the sunspots. Conclusions: Intrinsic dimension has the potential to distinguish simple from complex active regions. These results also pave the way for patch-based dictionary learning with a view toward automatic clustering of active regions.

  5. Isolation and Characterization of the DNA and Protein Binding Activities of Adenovirus Core Protein V

    PubMed Central

    Pérez-Vargas, Jimena; Vaughan, Robert C.; Houser, Carolyn; Hastie, Kathryn M.; Kao, C. Cheng

    2014-01-01

    ABSTRACT The structure of adenovirus outer capsid was revealed recently at 3- to 4-Å resolution (V. Reddy, S. Natchiar, P. Stewart, and G. Nemerow, Science 329:1071–1075, 2010, http://dx.doi.org/10.1126/science.1187292); however, precise details on the function and biochemical and structural features for the inner core still are lacking. Protein V is one the most important components of the adenovirus core, as it links the outer capsid via association with protein VI with the inner DNA core. Protein V is a highly basic protein that strongly binds to DNA in a nonspecific manner. We report the expression of a soluble protein V that exists in monomer-dimer equilibrium. Using reversible cross-linking affinity purification in combination with mass spectrometry, we found that protein V contains multiple DNA binding sites. The binding sites from protein V mediate heat-stable nucleic acid associations, with some of the binding sites possibly masked in the virus by other core proteins. We also demonstrate direct interaction between soluble proteins V and VI, thereby revealing the bridging of the inner DNA core with the outer capsid proteins. These findings are consistent with a model of nucleosome-like structures proposed for the adenovirus core and encapsidated DNA. They also suggest an additional role for protein V in linking the inner nucleic acid core with protein VI on the inner capsid shell. IMPORTANCE Scant knowledge exists of how the inner core of adenovirus containing its double-stranded DNA (dsDNA) genome and associated proteins is organized. Here, we report a purification scheme for a recombinant form of protein V that allowed analysis of its interactions with the nucleic acid core region. We demonstrate that protein V exhibits stable associations with dsDNA due to the presence of multiple nucleic acid binding sites identified both in the isolated recombinant protein and in virus particles. As protein V also binds to the membrane lytic protein VI molecules

  6. Isolation and characterization of the DNA and protein binding activities of adenovirus core protein V.

    PubMed

    Pérez-Vargas, Jimena; Vaughan, Robert C; Houser, Carolyn; Hastie, Kathryn M; Kao, C Cheng; Nemerow, Glen R

    2014-08-01

    The structure of adenovirus outer capsid was revealed recently at 3- to 4-Å resolution (V. Reddy, S. Natchiar, P. Stewart, and G. Nemerow, Science 329:1071-1075, 2010, http://dx.doi.org/10.1126/science.1187292); however, precise details on the function and biochemical and structural features for the inner core still are lacking. Protein V is one the most important components of the adenovirus core, as it links the outer capsid via association with protein VI with the inner DNA core. Protein V is a highly basic protein that strongly binds to DNA in a nonspecific manner. We report the expression of a soluble protein V that exists in monomer-dimer equilibrium. Using reversible cross-linking affinity purification in combination with mass spectrometry, we found that protein V contains multiple DNA binding sites. The binding sites from protein V mediate heat-stable nucleic acid associations, with some of the binding sites possibly masked in the virus by other core proteins. We also demonstrate direct interaction between soluble proteins V and VI, thereby revealing the bridging of the inner DNA core with the outer capsid proteins. These findings are consistent with a model of nucleosome-like structures proposed for the adenovirus core and encapsidated DNA. They also suggest an additional role for protein V in linking the inner nucleic acid core with protein VI on the inner capsid shell. Scant knowledge exists of how the inner core of adenovirus containing its double-stranded DNA (dsDNA) genome and associated proteins is organized. Here, we report a purification scheme for a recombinant form of protein V that allowed analysis of its interactions with the nucleic acid core region. We demonstrate that protein V exhibits stable associations with dsDNA due to the presence of multiple nucleic acid binding sites identified both in the isolated recombinant protein and in virus particles. As protein V also binds to the membrane lytic protein VI molecules, this core protein may

  7. Technique for inferring sizes of stellar-active regions

    SciTech Connect

    Dobson-Hockey, A.K.; Radick, R.R.

    1986-01-01

    Inspection of spectroheliograms showing large, well-developed active regions generally show the sunspots to lead the associated plage, in the sense of the solar rotation. Measurements have been made from spectroheliograms of spot-plage offsets and compared with nearly contemporaneous integrated disk observations. Larger active regions generally show larger spot leads; however, information regarding active-region sizes and spot-plage offsets is not readily obtainable form stellar-type observations of the Sun.

  8. Norepinephrine and dopamine modulate impulsivity on the five-choice serial reaction time task through opponent actions in the shell and core sub-regions of the nucleus accumbens.

    PubMed

    Economidou, Daina; Theobald, David E H; Robbins, Trevor W; Everitt, Barry J; Dalley, Jeffrey W

    2012-08-01

    Impulsive behavior is a hallmark of several neuropsychiatric disorders (eg, attention-deficit/hyperactivity disorder, ADHD). Although dopamine (DA) and norepinephrine (NE) have a significant role in the modulation of impulsivity their neural loci of action is not well understood. Here, we investigated the effects of the selective NE re-uptake inhibitor atomoxetine (ATO) and the mixed DA/NE re-uptake inhibitor methylphenidate (MPH), both with proven clinical efficacy in ADHD, on the number of premature responses on a five-choice serial reaction time task, an operational measure of impulsivity. Microinfusions of ATO into the shell, but not the core, sub-region of the nucleus accumbens (NAcb) significantly decreased premature responding whereas infusions of MPH in the core, but not the shell, sub-region significantly increased premature responding. However, neither ATO nor MPH significantly altered impulsive behavior when infused into the prelimbic or infralimbic cortices. The opposing effects of ATO and MPH in the NAcb core and shell on impulsivity were unlikely mediated by ancillary effects on behavioral activation as locomotor activity was either unaffected, as in the case of ATO infusions in the core and shell, or increased when MPH was infused into either the core and shell sub-region. These findings indicate an apparently 'opponent' modulation of premature responses by NE and DA in the NAcb shell or core, respectively, and suggest that the symptom clusters of hyperactive-impulsive type ADHD may have distinct neural and neurochemical substrates.

  9. Differential Engagement of Brain Regions within a "Core" Network during Scene Construction

    ERIC Educational Resources Information Center

    Summerfield, Jennifer J.; Hassabis, Demis; Maguire, Eleanor A.

    2010-01-01

    Reliving past events and imagining potential future events engages a well-established "core" network of brain areas. How the brain constructs, or reconstructs, these experiences or scenes has been debated extensively in the literature, but remains poorly understood. Here we designed a novel task to investigate this (re)constructive process by…

  10. The adenylation domain of tyrocidine synthetase 1--structural and functional role of the interdomain linker region and the (S/T)GT(T/S)GXPKG core sequence.

    PubMed

    Dieckmann, R; Pavela-Vrancic, M; Pfeifer, E; von Döhren, H; Kleinkauf, H

    1997-08-01

    Sequence analysis of peptide synthetases revealed extensive structure similarity with firefly luciferase, whose crystal structure has recently become available, providing evidence for the localization of the active site at the interface between two subdomains separated by a distorted linker region [Conti, E., Franks, N. P. & Brick, P. (1996) Structure 4, 287-298]. The functional importance of two flexible loops, corresponding to the linker region of firefly luciferase and the highly conserved (S/T)GT(T/S)GXPKG core sequence, has been studied in view of the proposed conformational changes by the use of mutant analysis, limited proteolysis and chemical modification of tyrocidine synthetase 1. Substitution of the highly conserved Arg416, residing in the loop separating the subdomains of the adenylation domain, resulted in profound loss of activity. Limited proteolysis of the mutant suggested significant structural changes as manifested by lack of protection to degradation in the presence of substrates, revealing a probable disturbance of the induced-fit mechanism regulating the transformation from an open to a closed conformation. Mutants, obtained by replacement of the conserved Lys186 from the (S/T)GT(T/S)GXPKG core sequence, displayed only minor differences in substrate-binding affinity despite significant reduction of catalytic efficiency. Residue Lys186 appears to play an important role in either stabilization of the bound substrate through charge-charge-interactions, and/or fixing of the loop for maintainance of the active-site conformation.

  11. Core promoter analysis of porcine Six1 gene and its regulation of the promoter activity by CpG methylation.

    PubMed

    Wu, Wangjun; Ren, Zhuqing; Liu, Honglin; Wang, Linjie; Huang, Ruihua; Chen, Jie; Zhang, Lin; Li, Pinghua; Xiong, Yuanzhu

    2013-10-25

    Six1, an evolutionary conserved transcription factor, has been shown to play an important role in organogenesis and diseases. However, no reports were shown to investigate its transcriptional regulatory mechanisms. In the present study, we first identified porcine Six1 gene core promoter region (+170/-360) using luciferase reporter assay system and found that promoter activities were significantly higher in the mouse myoblast C2C12 cells than that in the mouse fibroblast C3H10T1/2 cells, implying that Six1 promoter could possess muscle-specific characteristics. Moreover, our results showed that promoter activities of Six1 were decreased as induction of differentiation of C2C12 cells, which was accompanied by the down-regulation of mRNA expression of Six1 gene. In addition, we found that the DNA methylation of Six1 promoters in vitro obviously influences the promoter activities and the DNA methylation level of Six1 promoter core region was negatively correlated to Six1 gene expression in vivo. Taken together, we preliminarily clarified transcriptional regulatory mechanisms of Six1 gene, which should be useful for investigating its subtle transcriptional regulatory mechanisms in the future. On the other hand, based on Six1 involved in tumorigenesis, our data also provide a genetic foundation to control the generation of diseases via pursuing Six1 as therapeutic target gene.

  12. Tracked Active Region Patches for MDI and HMI

    NASA Astrophysics Data System (ADS)

    Turmon, Michael; Hoeksema, J. Todd; Bobra, Monica

    2014-06-01

    We describe tracked active-region patch data products that have been developed for HMI (HMI Active Region Patches, or HARPs) and for MDI (MDI Tracked Active Region Patches, or MDI TARPs). Both data products consist of tracked magnetic features on the scale of solar active regions. The now-released HARP data product covers 2010-present (>2000 regions to date). Like the HARPs, the MDI TARP data set is a catalog of active regions (ARs), indexed by a region ID number, analogous to a NOAA AR number, and time. The TARPs contain 6170 regions spanning 72000 images taken over 1996-2010, and will be availablein the MDI resident archive (RA).MDI TARPs are computed based on the 96-minute synoptic magnetograms and intensitygrams. As with the related HARP data product, the approximate threshold for significance is 100G. Use of both image types together allows faculae and sunspots to be separated out as sub-classes of activity, in addition to identifying the overall active region that they are in. After being identified in single images, the magnetically-active patches are grouped and tracked from image to image. Merges among growing active regions, as well as faint active regions hovering at the threshold of detection, are handled automatically. Regions are tracked from their inception until they decay within view, or transit off the visible disk. For each active region and for each time, a bitmap image is stored containing the precise outline of the active region. Also, metadata such as areas and integrated fluxes are stored for each AR and for each time. Because there is a cross-calibration between the HMI and MDI magnetograms (Liu et al. 2012), it is straightforward to use the same classification and tracking rules for the HMI HARPs and the MDI TARPs. We show results demonstrating region correspondence, region boundary agreement, and agreement of flux metadata using the approximately 140 regions in the May 2010-October 2010 time period. We envision several uses for these data

  13. GLOBAL DYNAMICS OF SUBSURFACE SOLAR ACTIVE REGIONS

    SciTech Connect

    Jouve, L.; Brun, A. S.

    2013-01-01

    We present three-dimensional numerical simulations of a magnetic loop evolving in either a convectively stable or unstable rotating shell. The magnetic loop is introduced into the shell in such a way that it is buoyant only in a certain portion in longitude, thus creating an {Omega}-loop. Due to the action of magnetic buoyancy, the loop rises and develops asymmetries between its leading and following legs, creating emerging bipolar regions whose characteristics are similar to those of observed spots at the solar surface. In particular, we self-consistently reproduce the creation of tongues around the spot polarities, which can be strongly affected by convection. We further emphasize the presence of ring-shaped magnetic structures around our simulated emerging regions, which we call 'magnetic necklace' and which were seen in a number of observations without being reported as of today. We show that those necklaces are markers of vorticity generation at the periphery and below the rising magnetic loop. We also find that the asymmetry between the two legs of the loop is crucially dependent on the initial magnetic field strength. The tilt angle of the emerging regions is also studied in the stable and unstable cases and seems to be affected both by the convective motions and the presence of a differential rotation in the convective cases.

  14. OBSERVING CORONAL NANOFLARES IN ACTIVE REGION MOSS

    SciTech Connect

    Testa, Paola; DeLuca, Ed; Golub, Leon; Korreck, Kelly; Weber, Mark; De Pontieu, Bart; Martinez-Sykora, Juan; Title, Alan; Hansteen, Viggo; Cirtain, Jonathan; Winebarger, Amy; Kobayashi, Ken; Kuzin, Sergey; Walsh, Robert; DeForest, Craig

    2013-06-10

    The High-resolution Coronal Imager (Hi-C) has provided Fe XII 193A images of the upper transition region moss at an unprecedented spatial ({approx}0.''3-0.''4) and temporal (5.5 s) resolution. The Hi-C observations show in some moss regions variability on timescales down to {approx}15 s, significantly shorter than the minute-scale variability typically found in previous observations of moss, therefore challenging the conclusion of moss being heated in a mostly steady manner. These rapid variability moss regions are located at the footpoints of bright hot coronal loops observed by the Solar Dynamics Observatory/Atmospheric Imaging Assembly in the 94 A channel, and by the Hinode/X-Ray Telescope. The configuration of these loops is highly dynamic, and suggestive of slipping reconnection. We interpret these events as signatures of heating events associated with reconnection occurring in the overlying hot coronal loops, i.e., coronal nanoflares. We estimate the order of magnitude of the energy in these events to be of at least a few 10{sup 23} erg, also supporting the nanoflare scenario. These Hi-C observations suggest that future observations at comparable high spatial and temporal resolution, with more extensive temperature coverage, are required to determine the exact characteristics of the heating mechanism(s).

  15. Apparent and Intrinsic Evolution of Active Region Upflows

    NASA Astrophysics Data System (ADS)

    Baker, Deborah; Janvier, Miho; Démoulin, Pascal; Mandrini, Cristina H.

    2017-04-01

    We analyze the evolution of Fe xii coronal plasma upflows from the edges of ten active regions (ARs) as they cross the solar disk using the Hinode Extreme Ultraviolet Imaging Spectrometer (EIS) to do this. Confirming the results of Démoulin et al. ( Sol. Phys. 283, 341, 2013), we find that for each AR there is an observed long-term evolution of the upflows. This evolution is largely due to the solar rotation that progressively changes the viewpoint of dominantly stationary upflows. From this projection effect, we estimate the unprojected upflow velocity and its inclination to the local vertical. AR upflows typically fan away from the AR core by 40° to nearly vertical for the following polarity. The span of inclination angles is more spread out for the leading polarity, with flows angled from -29° (inclined toward the AR center) to 28° (directed away from the AR). In addition to the limb-to-limb apparent evolution, we identify an intrinsic evolution of the upflows that is due to coronal activity, which is AR dependent. Furthermore, line widths are correlated with Doppler velocities only for the few ARs with the highest velocities. We conclude that for the line widths to be affected by the solar rotation, the spatial gradient of the upflow velocities must be large enough such that the line broadening exceeds the thermal line width of Fe xii. Finally, we find that upflows occurring in pairs or multiple pairs are a common feature of ARs observed by Hinode/EIS, with up to four pairs present in AR 11575. This is important for constraining the upflow-driving mechanism as it implies that the mechanism is not local and does not occur over a single polarity. AR upflows originating from reconnection along quasi-separatrix layers between overpressure AR loops and neighboring underpressure loops is consistent with upflows occurring in pairs, unlike other proposed mechanisms that act locally in one polarity.

  16. FIP BIAS EVOLUTION IN A DECAYING ACTIVE REGION

    SciTech Connect

    Baker, D.; Yardley, S. L.; Driel-Gesztelyi, L. van; Long, D. M.; Green, L. M.; Brooks, D. H.; Démoulin, P.

    2015-04-01

    Solar coronal plasma composition is typically characterized by first ionization potential (FIP) bias. Using spectra obtained by Hinode’s EUV Imaging Spectrometer instrument, we present a series of large-scale, spatially resolved composition maps of active region (AR)11389. The composition maps show how FIP bias evolves within the decaying AR during the period 2012 January 4–6. Globally, FIP bias decreases throughout the AR. We analyzed areas of significant plasma composition changes within the decaying AR and found that small-scale evolution in the photospheric magnetic field is closely linked to the FIP bias evolution observed in the corona. During the AR’s decay phase, small bipoles emerging within supergranular cells reconnect with the pre-existing AR field, creating a pathway along which photospheric and coronal plasmas can mix. The mixing timescales are shorter than those of plasma enrichment processes. Eruptive activity also results in shifting the FIP bias closer to photospheric in the affected areas. Finally, the FIP bias still remains dominantly coronal only in a part of the AR’s high-flux density core. We conclude that in the decay phase of an AR’s lifetime, the FIP bias is becoming increasingly modulated by episodes of small-scale flux emergence, i.e., decreasing the AR’s overall FIP bias. Our results show that magnetic field evolution plays an important role in compositional changes during AR development, revealing a more complex relationship than expected from previous well-known Skylab results showing that FIP bias increases almost linearly with age in young ARs.

  17. Tgif1 Counterbalances the Activity of Core Pluripotency Factors in Mouse Embryonic Stem Cells.

    PubMed

    Lee, Bum-Kyu; Shen, Wenwen; Lee, Jiwoon; Rhee, Catherine; Chung, Haewon; Kim, Kun-Yong; Park, In-Hyun; Kim, Jonghwan

    2015-10-06

    Core pluripotency factors, such as Oct4, Sox2, and Nanog, play important roles in maintaining embryonic stem cell (ESC) identity by autoregulatory feedforward loops. Nevertheless, the mechanism that provides precise control of the levels of the ESC core factors without indefinite amplification has remained elusive. Here, we report the direct repression of core pluripotency factors by Tgif1, a previously known terminal repressor of TGFβ/activin/nodal signaling. Overexpression of Tgif1 reduces the levels of ESC core factors, whereas its depletion leads to the induction of the pluripotency factors. We confirm the existence of physical associations between Tgif1 and Oct4, Nanog, and HDAC1/2 and further show the level of Tgif1 is not significantly altered by treatment with an activator/inhibitor of the TGFβ/activin/nodal signaling. Collectively, our findings establish Tgif1 as an integral member of the core regulatory circuitry of mouse ESCs that counterbalances the levels of the core pluripotency factors in a TGFβ/activin/nodal-independent manner. Copyright © 2015 The Authors. Published by Elsevier Inc. All rights reserved.

  18. Homologous flares and the evolution of NOAA Active Region 2372

    NASA Technical Reports Server (NTRS)

    Strong, K. T.; Smith, J. B., Jr.; Mccabe, M. K.; Machado, M. E.; Saba, J. L. R.; Simnett, G. M.

    1984-01-01

    A detailed record of the evolution of NOAA Active Region 2372 has been compiled by the FBS Homology Study Group. It was one of the most prolific flare-producing regions observed by SMM. The flares occurred in distinct stages which corresponded to particular evolutionary phases in the development of the active region magnetic field. By comparison with a similar but less productive active region, it is found that the activity seems to be related to the magnetic complexity of the region and the amount of shear in the field. Further, the soft X-ray emission in the quiescent active region is related to its flare rate. Within the broader definition of homology adopted, there was a degree of homology between the events within each stage of evolution of AR2372.

  19. A Fractal Dimension Survey of Active Region Complexity

    NASA Technical Reports Server (NTRS)

    McAteer, R. T. James; Gallagher, Peter; Ireland, Jack

    2005-01-01

    A new approach to quantifying the magnetic complexity of active regions using a fractal dimension measure is presented. This fully-automated approach uses full disc MDI magnetograms of active regions from a large data set (2742 days of the SoHO mission; 9342 active regions) to compare the calculated fractal dimension to both Mount Wilson classification and flare rate. The main Mount Wilson classes exhibit no distinct fractal dimension distribution, suggesting a self-similar nature of all active regions. Solar flare productivity exhibits an increase in both the frequency and GOES X-ray magnitude of flares from regions with higher fractal dimensions. Specifically a lower threshold fractal dimension of 1.2 and 1.25 exists as a necessary, but not sufficient, requirement for an active region to produce M- and X-class flares respectively .

  20. Subsurface helicity of active regions 12192 and 10486

    NASA Astrophysics Data System (ADS)

    Komm, Rudolf; Tripathy, Sushant; Howe, Rachel; Hill, Frank

    2015-04-01

    The active region 10486 that produced the Halloween flares in 2003 initiated our interest in the kinetic helicity of subsurface flows associated with active regions. This lead to the realization that the helicity of subsurface flows is related to the flare activity of active regions. Eleven years later, a similarly enormous active region (12192) appeared on the solar surface. We plan to study the kinetic helicity of the subsurface flows associated with region 12192 and compare it to that of region 10486. For 10486, we have analyzed Dopplergrams obtained with the Michelson Doppler Imager (MDI) onboard the Solar and Heliospheric Observatory (SOHO) and the Global Oscillation Network Group (GONG) with a dense-pack ring-diagram analysis. For 12192, we have analyzed Dopplergrams from GONG and the Helioseismic and Magnetic Imager (HMI) onboard the Solar Dynamics Observatory (SDO). We will present the latest results.

  1. A Fractal Dimension Survey of Active Region Complexity

    NASA Technical Reports Server (NTRS)

    McAteer, R. T. James; Gallagher, Peter; Ireland, Jack

    2005-01-01

    A new approach to quantifying the magnetic complexity of active regions using a fractal dimension measure is presented. This fully-automated approach uses full disc MDI magnetograms of active regions from a large data set (2742 days of the SoHO mission; 9342 active regions) to compare the calculated fractal dimension to both Mount Wilson classification and flare rate. The main Mount Wilson classes exhibit no distinct fractal dimension distribution, suggesting a self-similar nature of all active regions. Solar flare productivity exhibits an increase in both the frequency and GOES X-ray magnitude of flares from regions with higher fractal dimensions. Specifically a lower threshold fractal dimension of 1.2 and 1.25 exists as a necessary, but not sufficient, requirement for an active region to produce M- and X-class flares respectively .

  2. Systematic mining of analog series with related core structures in multi-target activity space.

    PubMed

    Gupta-Ostermann, Disha; Hu, Ye; Bajorath, Jürgen

    2013-08-01

    We have aimed to systematically extract analog series with related core structures from multi-target activity space to explore target promiscuity of closely related analogous. Therefore, a previously introduced SAR matrix structure was adapted and further extended for large-scale data mining. These matrices organize analog series with related yet distinct core structures in a consistent manner. High-confidence compound activity data yielded more than 2,300 non-redundant matrices capturing 5,821 analog series that included 4,288 series with multi-target and 735 series with multi-family activities. Many matrices captured more than three analog series with activity against more than five targets. The matrices revealed a variety of promiscuity patterns. Compound series matrices also contain virtual compounds, which provide suggestions for compound design focusing on desired activity profiles.

  3. Core-shell column Tanaka characterization and additional tests using active pharmaceutical ingredients.

    PubMed

    Ludvigsson, Jufang Wu; Karlsson, Anders; Kjellberg, Viktor

    2016-12-01

    In the last decade, core-shell particles have gained more and more attention in fast liquid chromatography separations due to their comparable performance with fully porous sub-2 μm particles and their significantly lower back pressure. Core-shell particles are made of a solid core surrounded by a shell of classic fully porous material. To embrace the developed core-shell column market and use these columns in pharmaceutical analytical applications, 17 core-shell C18 columns purchased from various vendors with various dimensions (50 mm × 2.1 mm to 100 mm × 3 mm) and particle sizes (1.6-2.7 μm) were characterized using Tanaka test protocols. Furthermore, four selected active pharmaceutical ingredients were chosen as test probes to investigate the batch to batch reproducibility for core-shell columns of particle size 2.6-2.7 μm, with dimension of 100 × 3 mm and columns of particle size 1.6 μm, with dimension 100 × 2.1 mm under isocratic elution. Columns of particle size 2.6-2.7 μm were also tested under gradient elution conditions. To confirm the claimed comparable efficiency of 2.6 μm core-shell particles as sub-2 μm fully porous particles, column performances of the selected core-shell columns were compared with BEH C18 , 1.7 μm, a fully porous column material as well.

  4. Updates in the Global/Regional Integrated Model system (GRIMs)-Double Fourier Series (DFS) Dynamical Core

    NASA Astrophysics Data System (ADS)

    Koo, M. S.; Park, H.; Park, S. H.; Hong, S. Y.

    2014-12-01

    The Global/Regional Integrated Model system (GRIMs)-double Fourier series (DFS) spectral dynamical core has been developed to overcome the limitation of traditional spectral model using spherical harmonics in terms of computational cost at very high resolution. Recently, the GRIMs-DFS dynamical core was updated in two respects: (1) better scalability on high-performance computing platform; and (2) reduction of numerical time-stepping error. To improve the parallel efficiency, the archived wave domain was designed not to be sliced in the meridional direction, but to be decomposed in the horizontal and vertical directions. Although the computational cost slightly increased due to the requirement of temporary work array, the revised DFS dynamical core yielded higher scalability in terms of the wall-clock-time than the original one. In addition, its efficiency gain became greater with the increase of horizontal resolution when the number of processors is increased. The Robert-Asselin-Williams (RAW) time filter has been proposed as a simple improvement to the widely used Robert-Asselin filter, in order to reduce time-stepping errors in semi-implicit leapfrog integration. This new approach was implemented into the GRIMs-DFS dynamical core and its impact was quantitatively evaluated on medium-range forecast and seasonal ensemble prediction frameworks. Preliminary results showed that the RAW time-filter properly reduced spurious light rainfalls that might be produced from unphysical computational mode generated by leap-frog time stepping. Further details will be presented in the conference.

  5. Space-weather MDI Active Region Patches (SMARPs)

    NASA Astrophysics Data System (ADS)

    Bobra, Monica

    2017-08-01

    We are developing a new data product from the Michelson Doppler Imager (MDI) onboard the Solar and Heliospheric Observatory (SoHO) called Space-weather MDI Active Region Patches (SMARPs). The SMARP data series provide maps of the photospheric line-of-sight magnetic field in patches that encompass automatically tracked magnetic concentrations, or active regions, for their entire lifetime. These concentrations are automatically detected in the photospheric line-of-sight magnetic field data using a method described in Turmon et al. (2010) and, thus, are necessarily different from NOAA's definition of an active region. As such, these regions are assigned their own identification number, or SMARP number, which is also linked to a NOAA active region number should it exist. In addition, keywords in the SMARP data series include parameters that concisely characterize the magnetic field distribution. These parameters may be useful for active region event forecasting and for identifying regions of interest. These parameters are calculated per patch and are available on a 96 minute cadence.The SMARP data product is designed to provide seamless coverage with its counterpart, the Space-weather HMI Active Region Patches (SHARPs), described in Bobra et al. (2014). Together, the SMARP and SHARP data series provide continuous coverage of tracked active regions for two solar cycles from 1996 to the present day. The SMARP data series, which runs from April 1996 to October 2010, contains 9496 unique active regions tracked throughout their lifetime. The SHARP data series, which runs from May 2010 to the present day, contains (as of May 30, 2017) 3883 unique active regions tracked throughout their lifetime. In addition, the two series contain 118 unique active regions during the overlap period between May and October 2010. SMARP data will be available at jsoc.stanford.edu and the photospheric line-of-sight magnetic field maps will be available in either of two different coordinate

  6. The Non-Core Regions of Human Lysozyme Amyloid Fibrils Influence Cytotoxicity

    PubMed Central

    Mossuto, Maria F.; Dhulesia, Anne; Devlin, Glyn; Frare, Erica; Kumita, Janet R.; de Laureto, Patrizia Polverino; Dumoulin, Mireille; Fontana, Angelo; Dobson, Christopher M.; Salvatella, Xavier

    2010-01-01

    Identifying the cause of the cytotoxicity of species populated during amyloid formation is crucial to understand the molecular basis of protein deposition diseases. We have examined different types of aggregates formed by lysozyme, a protein found as fibrillar deposits in patients with familial systemic amyloidosis, by infrared spectroscopy, transmission electron microscopy, and depolymerization experiments, and analyzed how they affect cell viability. We have characterized two types of human lysozyme amyloid structures formed in vitro that differ in morphology, molecular structure, stability, and size of the cross-β core. Of particular interest is that the fibrils with a smaller core generate a significant cytotoxic effect. These findings indicate that protein aggregation can give rise to species with different degree of cytotoxicity due to intrinsic differences in their physicochemical properties. PMID:20624399

  7. Core-shell structured TiO2@polydopamine for highly active visible-light photocatalysis.

    PubMed

    Mao, Wen-Xin; Lin, Xi-Jie; Zhang, Wei; Chi, Zi-Xiang; Lyu, Rong-Wen; Cao, An-Min; Wan, Li-Jun

    2016-06-04

    This communication reports that the TiO2@polydopamine nanocomposite with a core-shell structure could be a highly active photocatalyst working under visible light. A very thin layer of polydopamine at around 1 nm was found to be critical for the degradation of Rhodamine B.

  8. Penicillin Use in Meningococcal Disease Management: Active Bacterial Core Surveillance Sites, 2009.

    PubMed

    Blain, Amy E; Mandal, Sema; Wu, Henry; MacNeil, Jessica R; Harrison, Lee H; Farley, Monica M; Lynfield, Ruth; Miller, Lisa; Nichols, Megin; Petit, Sue; Reingold, Arthur; Schaffner, William; Thomas, Ann; Zansky, Shelley M; Anderson, Raydel; Harcourt, Brian H; Mayer, Leonard W; Clark, Thomas A; Cohn, Amanda C

    2016-09-01

    In 2009, in the Active Bacterial Core surveillance sites, penicillin was not commonly used to treat meningococcal disease. This is likely because of inconsistent availability of antimicrobial susceptibility testing and ease of use of third-generation cephalosporins. Consideration of current practices may inform future meningococcal disease management guidelines.

  9. PeV Neutrinos Observed by IceCube from Cores of Active Galactic Nuclei

    NASA Technical Reports Server (NTRS)

    Stecker, Floyd W.

    2013-01-01

    I show that the high energy neutrino flux predicted to arise from active galactic nuclei cores can explain the PeV neutrinos detected by IceCube without conflicting with the constraints from the observed extragalactic cosmic-ray and gamma-ray backgrounds.

  10. Effect of optical pumping on the refractive index and temperature in the core of active fibre

    SciTech Connect

    Gainov, V V; Ryabushkin, Oleg A

    2011-09-30

    This paper examines the refractive index change (RIC) induced in the core of Yb{sup 3+}-doped active silica fibres by pulsed pumping. RIC kinetic measurements with a Mach - Zehnder interferometer make it possible to separately assess the contributions of the electronic and thermal mechanisms to the RIC and evaluate temperature nonuniformities in the fibre.

  11. Penicillin Use in Meningococcal Disease Management: Active Bacterial Core Surveillance Sites, 2009

    PubMed Central

    Blain, Amy E.; Mandal, Sema; Wu, Henry; MacNeil, Jessica R.; Harrison, Lee H.; Farley, Monica M.; Lynfield, Ruth; Miller, Lisa; Nichols, Megin; Petit, Sue; Reingold, Arthur; Schaffner, William; Thomas, Ann; Zansky, Shelley M.; Anderson, Raydel; Harcourt, Brian H.; Mayer, Leonard W.; Clark, Thomas A.; Cohn, Amanda C.

    2016-01-01

    In 2009, in the Active Bacterial Core surveillance sites, penicillin was not commonly used to treat meningococcal disease. This is likely because of inconsistent availability of antimicrobial susceptibility testing and ease of use of third-generation cephalosporins. Consideration of current practices may inform future meningococcal disease management guidelines. PMID:27704009

  12. Geostatistical analysis and isoscape of ice core derived water stable isotope records in an Antarctic macro region

    NASA Astrophysics Data System (ADS)

    Hatvani, István Gábor; Leuenberger, Markus; Kohán, Balázs; Kern, Zoltán

    2017-09-01

    Water stable isotopes preserved in ice cores provide essential information about polar precipitation. In the present study, multivariate regression and variogram analyses were conducted on 22 δ2H and 53 δ18O records from 60 ice cores covering the second half of the 20th century. Taking the multicollinearity of the explanatory variables into account, as also the model's adjusted R2 and its mean absolute error, longitude, elevation and distance from the coast were found to be the main independent geographical driving factors governing the spatial δ18O variability of firn/ice in the chosen Antarctic macro region. After diminishing the effects of these factors, using variography, the weights for interpolation with kriging were obtained and the spatial autocorrelation structure of the dataset was revealed. This indicates an average area of influence with a radius of 350 km. This allows the determination of the areas which are as yet not covered by the spatial variability of the existing network of ice cores. Finally, the regional isoscape was obtained for the study area, and this may be considered the first step towards a geostatistically improved isoscape for Antarctica.

  13. The Interdomain Linker Region of HIV-1 Capsid Protein is a Critical Determinant of Proper Core Assembly and Stability

    PubMed Central

    Jiang, Jiyang; Ablan, Sherimay; Derebail, Suchitra; Hercík, Kamil; Soheilian, Ferri; Thomas, James A.; Tang, Shixing; Hewlett, Indira; Nagashima, Kunio; Gorelick, Robert J.; Freed, Eric O.; Levin, Judith G.

    2011-01-01

    The HIV-1 capsid protein consists of two independently folded domains connected by a flexible peptide linker (residues 146–150), the function of which remains to be defined. To investigate the role of this region in virus replication, we made alanine or leucine substitutions in each linker residue and two flanking residues. Three classes of mutants were identified: (i) S146A and T148A behave like wild type (WT); (ii) Y145A, I150A, and L151A are noninfectious, assemble unstable cores with aberrant morphology, and synthesize almost no viral DNA; and (iii) P147L and S149A display a poorly infectious, attenuated phenotype. Infectivity of P147L and S149A is rescued specifically by pseudotyping with vesicular stomatitis virus envelope glycoprotein. Moreover, despite having unstable cores, these mutants assemble WT-like structures and synthesize viral DNA, although less efficiently than WT. Collectively, these findings demonstrate that the linker region is essential for proper assembly and stability of cores and efficient replication. PMID:22036671

  14. Last glacial tephra layers in the Talos Dome ice core (peripheral East Antarctic Plateau), with implications for chronostratigraphic correlations and regional volcanic history

    NASA Astrophysics Data System (ADS)

    Narcisi, Biancamaria; Petit, Jean Robert; Langone, Antonio

    2017-06-01

    Tephra isochrons offer considerable potential for correlating diverse palaeoarchives and highlighting regional climatic differences. They are especially useful when applied to polar ice records encompassing the last glacial, as these clearly portray the pronounced millennial-scale climate variability that characterised this period. Here we present the continuous record of primary fallout tephra layers in the East Antarctic Talos Dome ice core (72°49‧S, 159°11‧E), developed upon examination of the core sections spanning the glacial period 16.5 to 71 ka. A total of ca. 45 discrete tephra deposits precisely positioned stratigraphically relative to the temperature record for the core and dated using the AICC2012 timescale, were identified. Quantitative grain size, particle morphology, major and trace element composition using Coulter Counter, SEM, EPMA-WDS, and LA-ICP-MS analytical methods were studied as diagnostic features for tephra characterisation. The tephrostratigraphic framework provides a reference for future precise comparison between ice and sediment sequences across the Antarctic continent. Indeed, several potential markers characterised by distinct volcanic glass geochemistry and/or particular stratigraphic location (e.g., a 17.6-ka ash layer deposited during the well-known major acidity event) are now available for the direct linkage of palaeoclimatic archives. The Talos Dome tephra sequence, dominated by mid-distal pyroclastic products from the nearby Northern Victoria Land volcanoes, also represents the most comprehensive and best time-constrained record of regional Antarctic volcanism yet developed. It documents nearly continuous sustained explosive activity during the considered time interval and, combined with previous ice-core tephra results for the last and the current interglacial periods, suggests progressive compositional shift through time.

  15. Magnetic Characteristics of Active Region Heating Observed with TRACE, SOHO/EIT, and Yohkoh/SXT

    NASA Technical Reports Server (NTRS)

    Porter, J. G.; Falconer, D. A.; Moore, R. L.; Rose, M. Franklin (Technical Monitor)

    2001-01-01

    Over the past several years, we have reported results from studies that have compared the magnetic structure and heating of the transition region and corona (both in active regions and in the quiet Sun) by combining X-ray and EUV images from Yohkoh and Solar and Heliospheric Observatory (SOHO) with photospheric magnetograms from ground-based observatories. Our findings have led us to the hypothesis that most heating throughout the corona is driven from near and below the base of the corona by eruptive microflares occurring in compact low-lying "core magnetic fields (i.e., fields rooted along and closely enveloping polarity inversion lines in the photospheric magnetic flux). We now extend these studies, comparing sequences of UV images from Transition Region and Coronal Explorer (TRACE) with longitudinal magnetograms from Kitt Peak and vector magnetograms from MUSIC. These comparisons confirm the previous results regarding the importance of core-field activity to active region heating. Activity in fields associated with satellite polarity inclusions and/or magnetically sheared configurations is especially prominent. This work is funded by NASA's Office of Space Science through the Sun-Earth Connection Guest Investigator Program and the Solar Physics Supporting Research and Technology Program.

  16. Magnetic Characteristics of Active Region Heating Observed with TRACE, SOHO/EIT, and Yohkoh/SXT

    NASA Technical Reports Server (NTRS)

    Porter, J. G.; Falconer, D. A.; Moore, R. L.; Rose, M. Franklin (Technical Monitor)

    2001-01-01

    Over the past several years, we have reported results from studies that have compared the magnetic structure and heating of the transition region and corona (both in active regions and in the quiet Sun) by combining X-ray and EUV images from Yohkoh and Solar and Heliospheric Observatory (SOHO) with photospheric magnetograms from ground-based observatories. Our findings have led us to the hypothesis that most heating throughout the corona is driven from near and below the base of the corona by eruptive microflares occurring in compact low-lying "core magnetic fields (i.e., fields rooted along and closely enveloping polarity inversion lines in the photospheric magnetic flux). We now extend these studies, comparing sequences of UV images from Transition Region and Coronal Explorer (TRACE) with longitudinal magnetograms from Kitt Peak and vector magnetograms from MUSIC. These comparisons confirm the previous results regarding the importance of core-field activity to active region heating. Activity in fields associated with satellite polarity inclusions and/or magnetically sheared configurations is especially prominent. This work is funded by NASA's Office of Space Science through the Sun-Earth Connection Guest Investigator Program and the Solar Physics Supporting Research and Technology Program.

  17. Enhancing absorption in coated semiconductor nanowire/nanorod core-shell arrays using active host matrices

    NASA Astrophysics Data System (ADS)

    Jule, Leta; Dejene, Francis; Roro, Kittessa

    2016-12-01

    In the present work, we investigated theoretically and experimentally the interaction of radiation field phenomena interacting with arrays of nanowire/nanorod core-shell embedded in active host matrices. The optical properties of composites are explored including the case when the absorption of propagating wave by dissipative component is completely compensated by amplification in active (lasing) medium. On the basis of more elaborated modeling approach and extended effective medium theory, the effective polarizability and the refractive index of electromagnetic mode dispersion of the core-shell nanowire arrays are derived. ZnS(shell)-coated by sulphidation process on ZnO(shell) nanorod arrays grown on (100) silicon substrate by chemical bath deposition (CBD) has been used for theoretical comparison. Compared with the bare ZnO nanorods, ZnS-coated core/shell nanorods exhibit a strongly reduced ultraviolet (UV) emission and a dramatically enhanced deep level (DL) emission. Obviously, the UV and DL emission peaks are attributed to the emissions of ZnO nanorods within ZnO/ZnS core/shell nanorods. The reduction of UV emission after ZnS coating seems to agree with the charge separation mechanism of type-II band alignment that holes transfer from the core to shell, which would quench the UV emission to a certain extent. Our theoretical calculations and numerical simulation demonstrate that the use of active host (amplifying) medium to compensate absorption at metallic inclusions. Moreover the core-shell nanorod/nanowire arrays create the opportunity for broad band absorption and light harvesting applications.

  18. Dye-Sensitized Core/Active Shell Upconversion Nanoparticles for Optogenetics and Bioimaging Applications

    SciTech Connect

    Wu, Xiang; Zhang, Yuanwei; Takle, Kendra; Bilsel, Osman; Li, Zhanjun; Lee, Hyungseok; Zhang, Zijiao; Li, Dongsheng; Fan, Wei; Duan, Chunying; Chan, Emory M.; Lois, Carlos; Xiang, Yang; Han, Gang

    2016-01-26

    Near Infrared (NIR) dye-sensitized upconversion nanoparticles (UCNPs) have recently been proposed in order to broaden the absorption range and to boost upconversion efficiency. However, implementing this strategy has been limited only to bare core UCNP structures that are faintly luminescent. Herein, we report on an approach to achieve significantly enhanced upconversion luminescence in dye-sensitized core-active shell UCNPs with a broadened absorption range via the doping of ytterbium ions in the UCNP shell in order to bridge the energy transfer from the dye to the UCNP core. As a result, we have been able to synergize the two most practical upconversion booster effectors (dye-sensitizing and core/shell enhancement). The absolute quantum yield of our dye-sensitized core/active shell UCNPs at 800 nm was determined to be ~6% at 2 W/cm2, about 33 times larger than the highest value reported to date for existing 800 nm excitable UCNPs. Moreover, for the first time, by using dye-sensitized core/active shell UCNP embedded poly(methyl methacrylate) polymer implantable systems, we successfully shifted the optogenetic neuron excitation window to a wavelength that is compatible with deep tissue penetrable near the infrared wavelength at 800 nm. Finally, amphiphilic triblock copolymer, Pluronic F127 coatings permit the transfer of hydrophobic UCNPs into water, resulting in water-soluble nanoparticles with well-preserved optical property in aqueous solution. We believe that this research offers a new solution to enhance upconversion efficiency for photonic and biophotonic purposes and opens up new opportunities to use UCNPs as a NIR relay for optogenetic applications.

  19. Software Displays Data on Active Regions of the Sun

    NASA Technical Reports Server (NTRS)

    Golightly, Mike; Weyland, Mark; Raben, Vern

    2011-01-01

    The Solar Active Region Display System is a computer program that generates, in near real time, a graphical display of parameters indicative of the spatial and temporal variations of activity on the Sun. These parameters include histories and distributions of solar flares, active region growth, coronal mass ejections, size, and magnetic configuration. By presenting solar-activity data in graphical form, this program accelerates, facilitates, and partly automates what had previously been a time-consuming mental process of interpretation of solar-activity data presented in tabular and textual formats. Intended for original use in predicting space weather in order to minimize the exposure of astronauts to ionizing radiation, the program might also be useful on Earth for predicting solar-wind-induced ionospheric effects, electric currents, and potentials that could affect radio-communication systems, navigation systems, pipelines, and long electric-power lines. Raw data for the display are obtained automatically from the Space Environment Center (SEC) of the National Oceanic and Atmospheric Administration (NOAA). Other data must be obtained from the NOAA SEC by verbal communication and entered manually. The Solar Active Region Display System automatically accounts for the latitude dependence of the rate of rotation of the Sun, by use of a mathematical model that is corrected with NOAA SEC active-region position data once every 24 hours. The display includes the date, time, and an image of the Sun in H light overlaid with latitude and longitude coordinate lines, dots that mark locations of active regions identified by NOAA, identifying numbers assigned by NOAA to such regions, and solar-region visual summary (SRVS) indicators associated with some of the active regions. Each SRVS indicator is a small pie chart containing five equal sectors, each of which is color-coded to provide a semiquantitative indication of the degree of hazard posed by one aspect of the activity at

  20. A 60-year ice-core record of regional climate from Adélie Land, coastal Antarctica

    NASA Astrophysics Data System (ADS)

    Goursaud, Sentia; Masson-Delmotte, Valérie; Favier, Vincent; Preunkert, Susanne; Fily, Michel; Gallée, Hubert; Jourdain, Bruno; Legrand, Michel; Magand, Olivier; Minster, Bénédicte; Werner, Martin

    2017-02-01

    A 22.4 m-long shallow firn core was extracted during the 2006/2007 field season from coastal Adélie Land. Annual layer counting based on subannual analyses of δ18O and major chemical components was combined with 5 reference years associated with nuclear tests and non-retreat of summer sea ice to build the initial ice-core chronology (1946-2006), stressing uncertain counting for 8 years. We focus here on the resulting δ18O and accumulation records. With an average value of 21.8 ± 6.9 cm w.e. yr-1, local accumulation shows multi-decadal variations peaking in the 1980s, but no long-term trend. Similar results are obtained for δ18O, also characterised by a remarkably low and variable amplitude of the seasonal cycle. The ice-core records are compared with regional records of temperature, stake area accumulation measurements and variations in sea-ice extent, and outputs from two models nudged to ERA (European Reanalysis) atmospheric reanalyses: the high-resolution atmospheric general circulation model (AGCM), including stable water isotopes ECHAM5-wiso (European Centre Hamburg model), and the regional atmospheric model Modèle Atmosphérique Régional (AR). A significant linear correlation is identified between decadal variations in δ18O and regional temperature. No significant relationship appears with regional sea-ice extent. A weak and significant correlation appears with Dumont d'Urville wind speed, increasing after 1979. The model-data comparison highlights the inadequacy of ECHAM5-wiso simulations prior to 1979, possibly due to the lack of data assimilation to constrain atmospheric reanalyses. Systematic biases are identified in the ECHAM5-wiso simulation, such as an overestimation of the mean accumulation rate and its interannual variability, a strong cold bias and an underestimation of the mean δ18O value and its interannual variability. As a result, relationships between simulated δ18O and temperature are weaker than observed. Such systematic

  1. Reading cinnamon activates olfactory brain regions.

    PubMed

    González, Julio; Barros-Loscertales, Alfonso; Pulvermüller, Friedemann; Meseguer, Vanessa; Sanjuán, Ana; Belloch, Vicente; Avila, César

    2006-08-15

    Some words immediately and automatically remind us of odours, smells and scents, whereas other language items do not evoke such associations. This study investigated, for the first time, the abstract linking of linguistic and odour information using modern neuroimaging techniques (functional MRI). Subjects passively read odour-related words ('garlic', 'cinnamon', 'jasmine') and neutral language items. The odour-related terms elicited activation in the primary olfactory cortex, which include the piriform cortex and the amygdala. Our results suggest the activation of widely distributed cortical cell assemblies in the processing of olfactory words. These distributed neuron populations extend into language areas but also reach some parts of the olfactory system. These distributed neural systems may be the basis of the processing of language elements, their related conceptual and semantic information and the associated sensory information.

  2. Developing a Comprehensive Active Region Database for the IRIS Observatory

    NASA Astrophysics Data System (ADS)

    Ho, A. Q. A.; Schmit, D. J.

    2016-12-01

    The fleet of space-based solar observatories provides a plethora of data to allow further analysis of the dynamics of active regions. In order to compare different solar remote sensing datasets, we determine the spatial and temporal overlap of datasets from different sources. We aim to facilitate analysis by creating an interactive visual tool that aids the comparison of observations of active regions from numerous sources such as IRIS and SDO/HMI, among others, that aggregates important physical quantities from each dataset. The interface allows for the selection and filtering of several key factors, such as particular active regions (organized by NOAA number) and specific time frames, to help refine searches. In addition, the tool provides a clearly organized map detailing the movement of active regions over time. The tool is projected to have several important implications, such as the ability to perform comprehensive statistical studies regarding the evolution of active regions and their chromospheres.

  3. Region of interest selection of long core plug samples by magnetic resonance imaging: profiling and local T2 measurement

    NASA Astrophysics Data System (ADS)

    Vashaee, S.; Petrov, O. V.; Balcom, B. J.; Newling, B.

    2014-03-01

    Magnetic resonance imaging (MRI) is increasingly employed as a core analysis technique by the oil and gas industry. In axial profiling of petroleum reservoir core samples and core plugs, the sample of interest may frequently be much longer than the natural field of view (FOV) defined by the radio frequency (RF) sensor and region of constant magnetic field gradient. Profiling such samples with a low field MRI will result in distorted, non-quantitative axial profiles near the edge of the FOV with data from outside the desired FOV folding back into the image, when the gradient magnetic field homogenity region is shorter than the region of RF excitation. The quality of MRI as a core analysis technique is increased if imaging can be performed on intact samples with the FOV reduced to the region of interest (ROI), either to increase the image resolution or to reduce the total time for imaging. A spatially selective adiabatic inversion pulse is applied in the presence of a slice selective magnetic field gradient to restrict the FOV to an ROI that is a small portion of a long sample. Slice selection is followed by a 1D centric-scan SPRITE measurement to yield an axial fluid density profile of the sample in the ROI. By employing adiabatic pulses, which are immune to RF field non-uniformities, it is possible to restrict the ROI to a region of homogeneous RF excitation, facilitating quantitative imaging. The method does not employ conventional selective excitation, but a subtraction based on images acquired with and without adiabatic inversion slice selection. The adiabatic slice selection lends itself to a selective T2 distribution measurement when a CPMG pulse sequence follows the slice selection. The inversion pulse selects a slice on the order of 1 cm at an arbitrary position. The local T2 distributions measured are of similar quality to bulk CPMG. This method is an alternative to MRI-based techniques for T2 mapping in short relaxation time samples in porous media when T2

  4. CORE MUSCLE ACTIVITY DURING THE CLEAN AND JERK LIFT WITH BARBELL VERSUS SANDBAGS AND WATER BAGS.

    PubMed

    Calatayud, Joaquin; Colado, Juan C; Martin, Fernando; Casaña, José; Jakobsen, Markus D; Andersen, Lars L

    2015-11-01

    While the traditional clean and jerk maneuver implies simultaneous participation of a large number of muscle groups, the use of this exercise with some variations to enhance core muscle activity remains uninvestigated. The purpose of this study was to compare the muscle activity during clean and jerk lift when performed with a barbell, sandbag and a water bag at same absolute load. Descriptive, repeated-measures study. Twenty-one young fit male university students (age: 25 ± 2.66 years; height: 180.71 ± 5.42 cm; body mass: 80.32 ± 9.8 kg; body fat percentage: 12.41 ± 3.56 %) participated. Surface electromyographic (EMG) signals were recorded from the anterior deltoid (AD), external oblique (OBLIQ), lumbar erector spinae (LUMB), and gluteus medius (GM) and were expressed as a percentage of the maximum voluntary isometric contraction (MVIC). There were no significantly significant differences for AD muscle activity between conditions, whereas muscle activation values for OBLIQ (60%MVIC), GM (29%MVIC) and LUMB (85%MVIC) were significantly higher during the water bag power clean and jerk maneuver when compared with the other conditions. The clean and jerk is an exercise that may be used to enhance core muscle activity. Performing the maneuver with water bags resulted in higher core muscle activity compared with sandbag and standard barbell versions. 3.

  5. Innovative optical spectrometers for ice core sciences and atmospheric monitoring at polar regions

    NASA Astrophysics Data System (ADS)

    Grilli, Roberto; Alemany, Olivier; Chappellaz, Jérôme; Desbois, Thibault; Faïn, Xavier; Kassi, Samir; Kerstel, Erik; Legrand, Michel; Marrocco, Nicola; Méjean, Guillaume; Preunkert, Suzanne; Romanini, Daniele; Triest, Jack; Ventrillard, Irene

    2015-04-01

    In this talk recent developments accomplished from a collaboration between the Laboratoire Interdisciplinaire de Physique (LIPhy) and the Laboratoire de Glaciologie et Géophysique de l'Environnement (LGGE) both in Grenoble (France), are discussed, covering atmospheric chemistry of high reactive species in polar regions and employing optical spectrometers for both in situ and laboratory measurements of glacial archives. In the framework of an ANR project, a transportable spectrometer based on the injection of a broadband frequency comb laser into a high-finesse optical cavity for the detection of IO, BrO, NO2 and H2CO has been realized.[1] The robust spectrometer provides shot-noise limited measurements for as long as 10 minutes, reaching detection limits of 0.04, 2, 10 and 200 ppt (2σ) for the four species, respectively. During the austral summer of 2011/12 the instrument has been used for monitoring, for the first time, NO2, IO and BrO at Dumont d'Urville Station at East of Antarctica. The measurements highlighted a different chemistry between East and West coast, with the halogen chemistry being promoted to the West and the OH and NOx chemistry on the East.[2] In the framework of a SUBGLACIOR project, an innovative drilling probe has been realized. The instrument is capable of retrieving in situ real-time vertical profiles of CH4 and δD of H2O trapped inside the ice sheet down to more than 3 km of depth within a single Antarctic season. The drilling probe containing an embedded OFCEAS (optical-feedback cavity-enhanced absorption spectroscopy) spectrometer will be extremely useful for (i) identify potential sites for investigating the oldest ice (aiming 1.5 Myrs BP records for resolving a major climate reorganization called the Mid-Pleistocene transition occurred around 1 Myrs ago) and (ii) providing direct access to past temperatures and climate cycles thanks to the vertical distribution of two key climatic signatures.[3] The spectrometer provides detection

  6. Early Miocene basement clasts in ANDRILL AND-2A core and their implications for paleoenvironmental changes in the McMurdo Sound region (western Ross Sea, Antarctica)

    NASA Astrophysics Data System (ADS)

    Talarico, Franco M.; Sandroni, Sonia

    2011-07-01

    A detailed provenance study of gravel-size clasts in the lowermost 438 m of the ANDRILL AND-2A core reveals a pattern of dynamic provenance variations which can be discussed for its implications for Early Miocene paleogeographical reconstructions and glaciological models in the McMurdo Sound region (Ross Sea). Clast distribution patterns and distribution of diagnostic basement clast assemblages indicative of three different provenance areas (Mulock-Skelton glacier, Carlyon-Darwin glacier and Koettlitz-Blue glacier regions) can be interpreted in terms of two distinctive ice dynamic scenarios: i) local fluctuations of outlet Transantarctic Mountains glaciers with dominant flows from W to E to the coast (documented in the lowermost core section, at ca. 20.2-20.1 Ma), and ii) larger volume of ice grounded at the regional scale in the Ross Embayment with flow lines running N-S close to the TAM front (in two periods, at ca. 19.7-19.7 Ma and at ca. 17.8-17.4 Ma). Moreover, in core sections including facies typical of open-marine to iceberg-influenced depositional environments, ice-rafted debris compositions reveal that during periods of glacial-minima setting sites of active calving processes dominantly occurred in areas including the present-day Blue-Koettlitz glacier coast, and subordinately in glacier tongues located further south in the Skelton-Mulock glacier area. Consistently with results of numerical modelling the reconstructed glaciological scenarios provide further constraints to paleogeographical reconstructions and glaciological models at the south-western tip of the Ross Sea during significant steps in Antarctic ice sheet evolution through the Early Miocene climatic events.

  7. 3D MHD Models of Active Region Loops

    NASA Technical Reports Server (NTRS)

    Ofman, Leon

    2004-01-01

    Present imaging and spectroscopic observations of active region loops allow to determine many physical parameters of the coronal loops, such as the density, temperature, velocity of flows in loops, and the magnetic field. However, due to projection effects many of these parameters remain ambiguous. Three dimensional imaging in EUV by the STEREO spacecraft will help to resolve the projection ambiguities, and the observations could be used to setup 3D MHD models of active region loops to study the dynamics and stability of active regions. Here the results of 3D MHD models of active region loops are presented, and the progress towards more realistic 3D MHD models of active regions. In particular the effects of impulsive events on the excitation of active region loop oscillations, and the generation, propagations and reflection of EIT waves are shown. It is shown how 3D MHD models together with 3D EUV observations can be used as a diagnostic tool for active region loop physical parameters, and to advance the science of the sources of solar coronal activity.

  8. A link between North Atlantic cooling and dry events in the core SW monsoon region in Lonar Lake, central India

    NASA Astrophysics Data System (ADS)

    Menzel, Philip; Gaye, Birgit; Prasad, Sushma; Plessen, Birgit; Stebich, Martina; Anoop, Ambili; Riedel, Nils; Basavaiah, Nathani

    2014-05-01

    A sediment core from Lonar Lake in central India covers the complete Holocene and was used to reconstruct the monsoon history of the core SW-monsoon region. We compare C/N ratios, stable carbon and nitrogen isotopes, grain size, as well as amino acid derived degradation proxies with climatically sensitive proxies of other records from South Asia and the North Atlantic region. The comparison reveals some more or less contemporaneous climate shifts. At Lonar Lake, a general long term climate transition from wet conditions during the early Holocene to drier conditions during the late Holocene, delineating the insolation curve, can be reconstructed. Several phases of shorter term climate alteration that superimpose the general climate trend correlate with cold phases in the North Atlantic region. The most pronounced climate deteriorations indicated by our data occurred between 6.2 - 5.2, 4.65 - 3.9, and 2.05 - 0.55 cal ka BP. The strong dry phase between 4.65 - 3.9 cal ka BP at Lonar Lake corroborates the hypothesis that severe climate deterioration contributed to the decline of the Indus Civilisation about 3.9 ka BP.

  9. An Autoinhibitory Helix in the C-Terminal Region of Phospholipase C-β Mediates Gαq Activation

    PubMed Central

    Lyon, Angeline M.; Tesmer, Valerie M.; Dhamsania, Vishan D.; Thal, David M.; Gutierrez, Joanne; Chowdhury, Shoaib; Suddala, Krishna C.; Northup, John K.; Tesmer, John J. G.

    2011-01-01

    Phospholipase C-β (PLCβ) is a key regulator of intracellular calcium levels whose activity is controlled by heptahelical receptors that couple to Gq. We have determined atomic structures of two invertebrate homologs of PLCβ (PLC21) from cephalopod retina and identified a helix from the C-terminal regulatory region that interacts with a conserved surface of the catalytic core of the enzyme. Mutations designed to disrupt the analogous interaction in human PLCβ3 dramatically increase basal activity and diminish stimulation by Gαq. Gαq binding requires displacement of the autoinhibitory helix from the catalytic core, thus providing an allosteric mechanism for activation of PLCβ. PMID:21822282

  10. Radio Sources in Low-Luminosity Active Galactic Nuclei. I. VLA Detections of Compact, Flat-Spectrum Cores

    NASA Astrophysics Data System (ADS)

    Nagar, Neil M.; Falcke, Heino; Wilson, Andrew S.; Ho, Luis C.

    2000-10-01

    We report a high-resolution (0.2"), 15 GHz survey of a sample of 48 low-luminosity active galactic nuclei with the Very Large Array.5 Compact radio emission has been detected above a flux density of 1.1 mJy in 57% (17 of 30) of low-ionization nuclear emission-line region (LINER) nuclei and low-luminosity Seyfert galaxies. The 2 cm radio power is significantly correlated with the emission-line ([O I] λ6300) luminosity. Using radio fluxes at other frequencies from the literature, we find that at least 15 of the 18 detected radio cores have a flat to inverted spectrum (α>=-0.3, Sν~να). While the present observations are consistent with the radio emission originating in star-forming regions (the brightness temperatures are >=102.5-4.5 K), higher resolution radio observations of 10 of the detected sources, reported in an accompanying paper, show that the cores are very compact (<~1 pc), of high brightness temperature (Tb>~108 K), and probably synchrotron self-absorbed, ruling out a starburst origin. Thus, our results suggest that at least 50% of low-luminosity Seyfert galaxies and LINERs in the sample are accretion powered, with the radio emission presumably coming from jets or advection-dominated accretion flows. We have detected only 1 of 18 ``transition'' (i.e., LINER+H II) nuclei observed, indicating that their radio cores are significantly weaker than those of ``pure'' LINERs. Compact 2 cm radio cores are found in both type 1 (i.e., with broad Hα) and type 2 (without broad Hα) nuclei. There is weak evidence, limited in significance by small numbers, that low-luminosity active galactic nuclei with compact radio cores exhibit radio ejecta preferentially aligned along the rotation axis of the galaxy disk. If this result were confirmed by a larger sample, it would lend support to the idea that the misalignment of accretion disks with the galaxy stellar disk in more luminous Seyfert galaxies is a result of radiation-pressure-induced warping of their accretion

  11. Palladium–platinum core-shell icosahedra with substantially enhanced activity and durability towards oxygen reduction

    SciTech Connect

    Wang, Xue; Choi, Sang-Il; Roling, Luke T.; Luo, Ming; Ma, Cheng; Zhang, Lei; Chi, Miaofang; Liu, Jingyue; Xie, Zhaoxiong; Herron, Jeffrey A.; Mavrikakis, Manos; Xia, Younan

    2015-07-02

    Conformal deposition of platinum as ultrathin shells on facet-controlled palladium nanocrystals offers a great opportunity to enhance the catalytic performance while reducing its loading. Here we report such a system based on palladium icosahedra. Owing to lateral confinement imposed by twin boundaries and thus vertical relaxation only, the platinum overlayers evolve into a corrugated structure under compressive strain. For the core-shell nanocrystals with an average of 2.7 platinum overlayers, their specific and platinum mass activities towards oxygen reduction are enhanced by eight- and sevenfold, respectively, relative to a commercial catalyst. Density functional theory calculations indicate that the enhancement can be attributed to the weakened binding of hydroxyl to the compressed platinum surface supported on palladium. After 10,000 testing cycles, the mass activity of the core-shell nanocrystals is still four times higher than the commercial catalyst. Ultimately, these results demonstrate an effective approach to the development of electrocatalysts with greatly enhanced activity and durability.

  12. Palladium-platinum core-shell icosahedra with substantially enhanced activity and durability towards oxygen reduction.

    PubMed

    Wang, Xue; Choi, Sang-Il; Roling, Luke T; Luo, Ming; Ma, Cheng; Zhang, Lei; Chi, Miaofang; Liu, Jingyue; Xie, Zhaoxiong; Herron, Jeffrey A; Mavrikakis, Manos; Xia, Younan

    2015-07-02

    Conformal deposition of platinum as ultrathin shells on facet-controlled palladium nanocrystals offers a great opportunity to enhance the catalytic performance while reducing its loading. Here we report such a system based on palladium icosahedra. Owing to lateral confinement imposed by twin boundaries and thus vertical relaxation only, the platinum overlayers evolve into a corrugated structure under compressive strain. For the core-shell nanocrystals with an average of 2.7 platinum overlayers, their specific and platinum mass activities towards oxygen reduction are enhanced by eight- and sevenfold, respectively, relative to a commercial catalyst. Density functional theory calculations indicate that the enhancement can be attributed to the weakened binding of hydroxyl to the compressed platinum surface supported on palladium. After 10,000 testing cycles, the mass activity of the core-shell nanocrystals is still four times higher than the commercial catalyst. These results demonstrate an effective approach to the development of electrocatalysts with greatly enhanced activity and durability.

  13. SERTS-95 Measurements of Wavelength Shifts in Coronal Emission Lines Across a Solar Active Region

    NASA Technical Reports Server (NTRS)

    Brosius, Jeffery W.; Thomas, Roger; Davila, Joseph

    1999-01-01

    We used slit spectra from the 1995 flight of Goddard Space Flight Center's Solar EUV Rocket Telescope and Spectrograph (SERTS-95) to measure wavelength shifts of coronal emission lines in the core of NOAA active region 7870 relative to its immediate surroundings (its "edge"). This method circumvents the unavailability of reliable laboratory rest wavelengths for the observed lines by using wavelengths from the edge spectrum as references. We derived the, SERTS-95 wavelength calibration from measurements of a post-flight laboratory spectrum containing 28 He II and Ne II EUV standard wavelengths known to high accuracy. Wavelength measurements for lines of He I, Ne III, and additional lines of Ne II in the laboratory calibration spectrum provide more accurate values than were previously available, enabling these lines also to serve as future calibration standards. Six solar lines were chosen for this study, namely, He II at 303.78 A, Fe XII at 193.51 A, Fe XIII at 202.05 A, Fe XIV at 211.33 A, Fe XV at 284.15 A, and Fe XVI at 335.41 A. Because these lines are free from known blends in the SERTS-95 spectra and are either intrinsically strong or near the SERTS-95 peak sensitivity, they are our most reliable lines for measuring relative wavelength shifts in the spatially resolved active region core spectra. The iron ions are the hottest ions ever used for this type of analysis. All six lines reveal statistically significant spatial variations in their measured relative wavelength shifts in the active region core, including mixtures of blueshifts and redshifts (each with maximum values corresponding to relative Doppler velocities approximately 15 km/s), indicating a dynamic, turbulent corona. For each of these lines we calculated weighted-average relative Doppler velocities from the wavelength shifts in the spatially resolved core spectra by weighting the shifts in the individual spatial pixels with their respective measurement uncertainties.

  14. Spectropolarimetry of an Active Region at the Photosphere and Chromosphere

    NASA Astrophysics Data System (ADS)

    Nagaraju, K.; Sankarasubramanian, K.; Rangarajan, K. E.

    2009-06-01

    Initial results on the simultaneous spectropolarimetric observations of an active region at the photosphere and chromosphere are presented. For this purpose, the Fe I line at λ6569 and the H I at λ6563 (H α) are used. Stratification of the line-of-sight (LOS) velocity and magnetic fields above an active region are discussed. The LOS magnetic field strengths are derived using the center-of-gravity (COG) method and the LOS velocity gradients are derived using the bisector technique. From this analysis it is found that both the velocity and magnetic gradients are larger in the umbral region above the sunspot compared to the penumbral region. And the magnetic field strength decreases much faster with height in the umbral region compared to the penumbral region. Upflows with larger LOS velocity gradients are located in the regions where stronger photospheric fields are observed.

  15. Simple Procedure to Compute the Inductance of a Toroidal Ferrite Core from the Linear to the Saturation Regions

    PubMed Central

    Salas, Rosa Ana; Pleite, Jorge

    2013-01-01

    We propose a specific procedure to compute the inductance of a toroidal ferrite core as a function of the excitation current. The study includes the linear, intermediate and saturation regions. The procedure combines the use of Finite Element Analysis in 2D and experimental measurements. Through the two dimensional (2D) procedure we are able to achieve convergence, a reduction of computational cost and equivalent results to those computed by three dimensional (3D) simulations. The validation is carried out by comparing 2D, 3D and experimental results. PMID:28809283

  16. Simple Procedure to Compute the Inductance of a Toroidal Ferrite Core from the Linear to the Saturation Regions.

    PubMed

    Salas, Rosa Ana; Pleite, Jorge

    2013-06-17

    We propose a specific procedure to compute the inductance of a toroidal ferrite core as a function of the excitation current. The study includes the linear, intermediate and saturation regions. The procedure combines the use of Finite Element Analysis in 2D and experimental measurements. Through the two dimensional (2D) procedure we are able to achieve convergence, a reduction of computational cost and equivalent results to those computed by three dimensional (3D) simulations. The validation is carried out by comparing 2D, 3D and experimental results.

  17. Interseasonal movements of greater sage-grouse, migratory behavior, and an assessment of the core regions concept in Wyoming

    USGS Publications Warehouse

    Fedy, Bradley C.; Aldridge, Cameron L.; Doherty, Kevin E.; O'Donnell, Michael S.; Beck, Jeffrey L.; Bedrosian, Bryan; Holloran, Matthew J.; Johnson, Gregory D.; Kaczor, Nicholas W.; Kirol, Christopher P.; Mandich, Cheryl A.; Marshall, David; McKee, Gwyn; Olson, Chad; Swanson, Christopher C.; Walker, Brett L.

    2012-01-01

    Animals can require different habitat types throughout their annual cycles. When considering habitat prioritization, we need to explicitly consider habitat requirements throughout the annual cycle, particularly for species of conservation concern. Understanding annual habitat requirements begins with quantifying how far individuals move across landscapes between key life stages to access required habitats. We quantified individual interseasonal movements for greater sage-grouse (Centrocercus urophasianus; hereafter sage-grouse) using radio-telemetry spanning the majority of the species distribution in Wyoming. Sage-grouse are currently a candidate for listing under the United States Endangered Species Act and Wyoming is predicted to remain a stronghold for the species. Sage-grouse use distinct seasonal habitats throughout their annual cycle for breeding, brood rearing, and wintering. Average movement distances in Wyoming from nest sites to summer-late brood-rearing locations were 8.1 km (SE = 0.3 km; n = 828 individuals) and the average subsequent distances moved from summer sites to winter locations were 17.3 km (SE = 0.5 km; n = 607 individuals). Average nest-to-winter movements were 14.4 km (SE = 0.6 km; n = 434 individuals). We documented remarkable variation in the extent of movement distances both within and among sites across Wyoming, with some individuals remaining year-round in the same vicinity and others moving over 50 km between life stages. Our results suggest defining any of our populations as migratory or non-migratory is innappropriate as individual strategies vary widely. We compared movement distances of birds marked using Global Positioning System (GPS) and very high frequency (VHF) radio marking techniques and found no evidence that the heavier GPS radios limited movement. Furthermore, we examined the capacity of the sage-grouse core regions concept to capture seasonal locations. As expected, we found the core regions approach, which was

  18. Active Region Morphologies Selected From Near-side Helioseismic Data

    NASA Astrophysics Data System (ADS)

    MacDonald, Gordon Andrew; Henney, Carl; Diaz Alfaro, Manuel; Gonzalez Hernandez, Irene; Arge, Nick; Lindsey, Charles; McAteer, James

    2015-04-01

    We estimate the morphology of near-side active regions using near-side helioseismology. Active regions from two data sets, ADAPT synchronic maps and GONG near-side helioseismic maps, were matched and their morphologies compared. Our algorithm recognizes 382 helioseismic active regions between 2002 April 25 and 2005 December 31 and matches them to their corresponding magnetic active regions with 100% success. A magnetic active region occupies 30% of the area of its helioseismic signature. Recovered helioseismic tilt angles are in good agreement with magnetic tilt angles. Approximately 20% of helioseismic active regions can be decomposed into leading and trailing polarity. Leading polarity components show no discernible scaling relationship, but trailing magnetic polarity components occupy approximately 25% of the area of the trailing helioseismic component. A nearside phase-magnetic calibration is in close agreement with a previous far-side helioseismic calibration and provides confidence that these morphological relationships can be used with far-side helioseismic data. Including far-side active region morphology in synchronic maps will have implications for coronal magnetic topology predictions and solar wind forecasts.

  19. Active Region Morphologies Selected from Near-side Helioseismic Data

    NASA Astrophysics Data System (ADS)

    MacDonald, G. A.; Henney, C. J.; Díaz Alfaro, M.; González Hernández, I.; Arge, C. N.; Lindsey, C.; McAteer, R. T. J.

    2015-07-01

    We estimate the morphology of near-side active regions using near-side helioseismology. Active regions from two data sets, Air Force Data Assimilative Photospheric flux Transport synchronic maps and Global Oscillation Network Group near-side helioseismic maps, were matched and their morphologies compared. Our algorithm recognizes 382 helioseismic active regions between 2002 April 25 and 2005 December 31 and matches them to their corresponding magnetic active regions with 100% success. A magnetic active region occupies 30% of the area of its helioseismic signature. Recovered helioseismic tilt angles are in good agreement with magnetic tilt angles. Approximately 20% of helioseismic active regions can be decomposed into leading and trailing polarity. Leading polarity components show no discernible scaling relationship, but trailing magnetic polarity components occupy approximately 25% of the area of the trailing helioseismic component. A nearside phase-magnetic calibration is in close agreement with a previous far-side helioseismic calibration and provides confidence that these morphological relationships can be used with far-side helioseismic data. Including far-side active region morphology in synchronic maps will have implications for coronal magnetic topology predictions and solar wind forecasts.

  20. A Multi Wavelength Study of Active Region Development

    NASA Astrophysics Data System (ADS)

    Lara, A.; Gopalswamy, N.; Kundu, M. R.; Perez-Enriquez, R.; Koshiishi, H.; Enome, S.

    1996-05-01

    We report on a study of the evolution of several active regions during 1993 April 17-28 using data obtained at multiple wavelengths that probe various heights of the active region corona. We use simultaneous microwave (1.5 and 17 GHz) and Soft X-ray images obtained by the Very Large Array (VLA), the Nobeyama Radio Heliograph (NRH) and the Soft X-ray Telescope (SXT) on board the Yohkoh spacecraft. We also use photospheric magnetograms from Kitt Peak National Observatory to study the development of Solar Active Regions. We have followed the development of various observed parameters such as brightness temperature and polarization using radio images. The X-ray data were used to track the development of density and temperature of active regions. Using the fact that the quiet active region radiation is thermal and adopting proper emission mechanism at each frequency domain, we construct a consistent picture for the three dimensional structure of the active regions. Particular attention has been paid to the mode coupling observed at 17 GHz while the active regions crossed the solar disk.

  1. ACTIVE REGION MORPHOLOGIES SELECTED FROM NEAR-SIDE HELIOSEISMIC DATA

    SciTech Connect

    MacDonald, G. A.; McAteer, R. T. J.; Henney, C. J.; Arge, C. N.; Díaz Alfaro, M.; González Hernández, I.; Lindsey, C.

    2015-07-01

    We estimate the morphology of near-side active regions using near-side helioseismology. Active regions from two data sets, Air Force Data Assimilative Photospheric flux Transport synchronic maps and Global Oscillation Network Group near-side helioseismic maps, were matched and their morphologies compared. Our algorithm recognizes 382 helioseismic active regions between 2002 April 25 and 2005 December 31 and matches them to their corresponding magnetic active regions with 100% success. A magnetic active region occupies 30% of the area of its helioseismic signature. Recovered helioseismic tilt angles are in good agreement with magnetic tilt angles. Approximately 20% of helioseismic active regions can be decomposed into leading and trailing polarity. Leading polarity components show no discernible scaling relationship, but trailing magnetic polarity components occupy approximately 25% of the area of the trailing helioseismic component. A nearside phase-magnetic calibration is in close agreement with a previous far-side helioseismic calibration and provides confidence that these morphological relationships can be used with far-side helioseismic data. Including far-side active region morphology in synchronic maps will have implications for coronal magnetic topology predictions and solar wind forecasts.

  2. Star-forming regions of the Aquila rift cloud complex. I. NH3 tracers of dense molecular cores

    NASA Astrophysics Data System (ADS)

    Levshakov, S. A.; Henkel, C.; Reimers, D.; Wang, M.; Mao, R.; Wang, H.; Xu, Y.

    2013-05-01

    Aims: The physics of star formation is an important part of Galactic evolution. Most stars are formed in high-density environments (n > 104 cm-3) and emit lines of diverse molecular transitions. In the present part of our survey we search for ammonia emitters in the Aquila rift complex, which trace the densest regions of molecular clouds. Methods: From a CO survey carried out with the Delingha 14-m telescope we selected ~150 targets for observations in other molecular lines. Here we describe the mapping observations in the NH3(1, 1) and (2, 2) inversion lines of the first 49 sources performed with the Effelsberg 100-m telescope. Results: The NH3(1, 1) emission lines are detected in 12 and the (2, 2) in 7 sources. Among the newly discovered NH3 sources, our sample includes the following well-known clouds: the starless core L694-2, the Serpens cloud cluster B, the Serpens dark cloudL572, the filamentary dark cloud L673, the isolated protostellar source B335, and the complex star-forming region Serpens South. Angular sizes between 40'' and 80'' (~0.04-0.08 pc) are observed for compact starless cores but can be as large as 9' (~0.5 pc) for filamentary dark clouds. The measured kinetic temperatures of the clouds lie between 9 K and 18 K. From NH3 excitation temperatures of 3-8 K we determine H2 densities with typical values of ~ (0.4-4) × 104 cm-3. The masses of the mapped cores range between ~0.05 and ~ 0.5 M⊙. The relative ammonia abundance X = [NH3]/[H2] varies from 1 × 10-7 to 5 × 10-7 with the mean ⟨ X ⟩ = (2.7 ± 0.6) × 10-7 (estimated from spatially resolved cores assuming a filling factor of η = 1). In two clouds, we observe kinematically split NH3 profiles separated by ~1 km s-1. The splitting is most likely due to bipolar molecular outflows, for one of which we determine an acceleration of V ˙ ≲ 0.03 km s-1 yr-1. A starless core with significant rotational energy is found to have a higher kinetic temperature than the other ones, which is probably

  3. Genetic and Structural Characterization of the Core Region of the Lipopolysaccharide from Serratia marcescens N28b (Serovar O4)

    PubMed Central

    Coderch, Núria; Piqué, Núria; Lindner, Buko; Abitiu, Nihal; Merino, Susana; Izquierdo, Luis; Jimenez, Natalia; Tomás, Juan M.; Holst, Otto; Regué, Miguel

    2004-01-01

    The gene cluster (waa) involved in Serratia marcescens N28b core lipopolysaccharide (LPS) biosynthesis was identified, cloned, and sequenced. Complementation analysis of known waa mutants from Escherichia coli K-12, Salmonella enterica, and Klebsiella pneumoniae led to the identification of five genes coding for products involved in the biosynthesis of a shared inner core structure: [l,d-HeppIIIα(1→7)-l,d-HeppIIα(1→3)-l,d-HeppIα(1→5)-KdopI(4←2)αKdopII] (l,d-Hepp, l-glycero-d-manno-heptopyranose; Kdo, 3-deoxy-d-manno-oct-2-ulosonic acid). Complementation and/or chemical analysis of several nonpolar mutants within the S. marcescens waa gene cluster suggested that in addition, three waa genes were shared by S. marcescens and K. pneumoniae, indicating that the core region of the LPS of S. marcescens and K. pneumoniae possesses additional common features. Chemical and structural analysis of the major oligosaccharide from the core region of LPS of an O-antigen-deficient mutant of S. marcescens N28b as well as complementation analysis led to the following proposed structure: β-Glc-(1→6)-α-Glc-(1→4))-α-d-GlcN-(1→4)-α-d-GalA-[(2←1)-α-d,d-Hep-(2←1)-α-Hep]-(1→3)-α-l,d-Hep[(7←1)-α-l,d-Hep]-(1→3)-α-l,d-Hep-[(4←1)-β-d-Glc]-(1→5)-Kdo. The D configuration of the β-Glc, α-GclN, and α-GalA residues was deduced from genetic data and thus is tentative. Furthermore, other oligosaccharides were identified by ion cyclotron resonance-Fourier-transformed electrospray ionization mass spectrometry, which presumably contained in addition one residue of d-glycero-d-talo-oct-2-ulosonic acid (Ko) or of a hexuronic acid. Several ions were identified that differed from others by a mass of +80 Da, suggesting a nonstoichiometric substitution by a monophosphate residue. However, none of these molecular species could be isolated in substantial amounts and structurally analyzed. On the basis of the structure shown above and the analysis of nonpolar mutants

  4. A Conserved GPG-Motif in the HIV-1 Nef Core Is Required for Principal Nef-Activities

    PubMed Central

    Martínez-Bonet, Marta; Palladino, Claudia; Briz, Veronica; Rudolph, Jochen M.; Fackler, Oliver T.; Relloso, Miguel; Muñoz-Fernandez, Maria Angeles; Madrid, Ricardo

    2015-01-01

    To find out new determinants required for Nef activity we performed a functional alanine scanning analysis along a discrete but highly conserved region at the core of HIV-1 Nef. We identified the GPG-motif, located at the 121–137 region of HIV-1 NL4.3 Nef, as a novel protein signature strictly required for the p56Lck dependent Nef-induced CD4-downregulation in T-cells. Since the Nef-GPG motif was dispensable for CD4-downregulation in HeLa-CD4 cells, Nef/AP-1 interaction and Nef-dependent effects on Tf-R trafficking, the observed effects on CD4 downregulation cannot be attributed to structure constraints or to alterations on general protein trafficking. Besides, we found that the GPG-motif was also required for Nef-dependent inhibition of ring actin re-organization upon TCR triggering and MHCI downregulation, suggesting that the GPG-motif could actively cooperate with the Nef PxxP motif for these HIV-1 Nef-related effects. Finally, we observed that the Nef-GPG motif was required for optimal infectivity of those viruses produced in T-cells. According to these findings, we propose the conserved GPG-motif in HIV-1 Nef as functional region required for HIV-1 infectivity and therefore with a potential interest for the interference of Nef activity during HIV-1 infection. PMID:26700863

  5. Regional Observation of Seismic Activity in Baekdu Mountain

    NASA Astrophysics Data System (ADS)

    Kim, Geunyoung; Che, Il-Young; Shin, Jin-Soo; Chi, Heon-Cheol

    2015-04-01

    Seismic unrest in Baekdu Mountain area between North Korea and Northeast China region has called attention to geological research community in Northeast Asia due to her historical and cultural importance. Seismic bulletin shows level of seismic activity in the area is higher than that of Jilin Province of Northeast China. Local volcanic observation shows a symptom of magmatic unrest in period between 2002 and 2006. Regional seismic data have been used to analyze seismic activity of the area. The seismic activity could be differentiated from other seismic phenomena in the region by the analysis.

  6. Biodegradable core-shell carriers for simultaneous encapsulation of synergistic actives.

    PubMed

    Windbergs, Maike; Zhao, Yuanjin; Heyman, John; Weitz, David A

    2013-05-29

    Simultaneous encapsulation of multiple active substances in a single carrier is essential for therapeutic applications of synergistic combinations of drugs. However, traditional carrier systems often lack efficient encapsulation and release of incorporated substances, particularly when combinations of drugs must be released in concentrations of a prescribed ratio. We present a novel biodegradable core-shell carrier system fabricated in a one-step, solvent-free process on a microfluidic chip; a hydrophilic active (doxorubicin hydrochloride) is encapsulated in the aqueous core, while a hydrophobic active (paclitaxel) is encapsulated in the solid shell. Particle size and composition can be precisely controlled, and core and shell can be individually loaded with very high efficiency. Drug-loaded particles can be dried and stored as a powder. We demonstrate the efficacy of this system through the simultaneous encapsulation and controlled release of two synergistic anticancer drugs using two cancer-derived cell lines. This solvent-free platform technology is also of high potential value for encapsulation of other active ingredients and chemical reagents.

  7. Insights into microstructure and chemistry of active fiber core material produced by the granulated silica method

    NASA Astrophysics Data System (ADS)

    Najafi, H.; Etissa, D.; Romano, V.

    2014-05-01

    The production of special fibers relies on new methods and materials to incorporate new functionalities into optical fibers by virtues of dopants and structure. In particular, the granulated silica method allows to rapidly produce active fibers with high dopant content and with virtually any microstructure. The implementation of this production method requires a multitude of process steps at various temperatures and temperature gradients that can significantly influence the optical properties of the produced preforms and fibers. To better understand and optimize the processes of active material production and fiber drawing parameters we have done a thorough analysis of microstructure, phase development, crystallinity and chemical mapping of active fiber cores produced by a combination of sol-gel process and granulated silica method with and without employment of a CO2 laser treatment. The microstructure of fibers have been analyzed with a diverse suite of techniques in Transmission Electron Microscopy (TEM), revealing formation of various silica polymorphs and distribution of active elements (i.e. Yb and P) into the core structure. Our results show the presence of another polymorph of silica with low crystallinity dispersed in the main amorphous polymorph (i.e. quartz). We conclude that in spite of importance of homogeneous distribution of Yb and P into the core, the formation of various silica polymorphs resulting from materials processing has to be considered.

  8. Isotropic Heating of Galaxy Cluster Cores via Rapidly Reorienting Active Galactic Nucleus Jets

    NASA Astrophysics Data System (ADS)

    Babul, Arif; Sharma, Prateek; Reynolds, Christopher S.

    2013-05-01

    Active galactic nucleus (AGN) jets carry more than sufficient energy to stave off catastrophic cooling of the intracluster medium (ICM) in the cores of cool-core clusters. However, in order to prevent catastrophic cooling, the ICM must be heated in a near-isotropic fashion and narrow bipolar jets with P jet = 1044 - 45 erg s-1, typical of radio AGNs at cluster centers, are inefficient in heating the gas in the transverse direction to the jets. We argue that due to existent conditions in cluster cores, the supermassive black holes (SMBHs) will, in addition to accreting gas via radiatively inefficient flows, experience short stochastic episodes of enhanced accretion via thin disks. In general, the orientation of these accretion disks will be misaligned with the spin axis of the black holes (BHs) and the ensuing torques will cause the BH's spin axis (and therefore the jet axis) to slew and rapidly change direction. This model not only explains recent observations showing successive generations of jet-lobes-bubbles in individual cool-core clusters that are offset from each other in the angular direction with respect to the cluster center, but also shows that AGN jets can heat the cluster core nearly isotropically on the gas cooling timescale. Our model does require that the SMBHs at the centers of cool-core clusters be spinning relatively slowly. Torques from individual misaligned disks are ineffective at tilting rapidly spinning BHs by more than a few degrees. Additionally, since SMBHs that host thin accretion disks will manifest as quasars, we predict that roughly 1-2 rich clusters within z < 0.5 should have quasars at their centers.

  9. Recommendations for a first Core Outcome Measurement set for complex regional PAin syndrome Clinical sTudies (COMPACT)

    PubMed Central

    Grieve, Sharon; Perez, Roberto SGM; Birklein, Frank; Brunner, Florian; Bruehl, Stephen; Harden R, Norman; Packham, Tara; Gobeil, Francois; Haigh, Richard; Holly, Janet; Terkelsen, Astrid; Davies, Lindsay; Lewis, Jennifer; Thomassen, Ilona; Connett, Robyn; Worth, Tina; Vatine, Jean-Jacques; McCabe, Candida S

    2017-01-01

    Complex Regional Pain Syndrome (CRPS) is a persistent pain condition that remains incompletely understood and challenging to treat. Historically, a wide range of different outcome measures have been used to capture the multidimensional nature of CRPS. This has been a significant limiting factor in the advancement of our understanding of the mechanisms and management of CRPS. In 2013, an international consortium of patients, clinicians, researchers and industry representatives was established, to develop and agree on a minimum core set of standardised outcome measures for use in future CRPS clinical research, including but not limited to clinical trials within adult populations The development of a core measurement set was informed through workshops and supplementary work, using an iterative consensus process. ‘What is the clinical presentation and course of CRPS, and what factors influence it?’ was agreed as the most pertinent research question that our standardised set of patient-reported outcome measures should be selected to answer. The domains encompassing the key concepts necessary to answer the research question were agreed as: pain, disease severity, participation and physical function, emotional and psychological function, self efficacy, catastrophizing and patient's global impression of change. The final core measurement set included the optimum generic or condition-specific patient-reported questionnaire outcome measures, which captured the essence of each domain, and one clinician reported outcome measure to capture the degree of severity of CRPS. The next step is to test the feasibility and acceptability of collecting outcome measure data using the core measurement set in the CRPS population internationally. PMID:28178071

  10. Extended core for motor/generator

    DOEpatents

    Shoykhet, Boris A.

    2005-05-10

    An extended stator core in a motor/generator can be utilized to mitigate losses in end regions of the core and a frame of the motor/generator. To mitigate the losses, the stator core can be extended to a length substantially equivalent to or greater than a length of a magnetically active portion in the rotor. Alternatively, a conventional length stator core can be utilized with a shortened magnetically active portion to mitigate losses in the motor/generator. To mitigate the losses in the core caused by stator winding, the core can be extended to a length substantially equivalent or greater than a length of stator winding.

  11. Extended core for motor/generator

    DOEpatents

    Shoykhet, Boris A.

    2006-08-22

    An extended stator core in a motor/generator can be utilized to mitigate losses in end regions of the core and a frame of the motor/generator. To mitigate the losses, the stator core can be extended to a length substantially equivalent to or greater than a length of a magnetically active portion in the rotor. Alternatively, a conventional length stator core can be utilized with a shortened magnetically active portion to mitigate losses in the motor/generator. To mitigate the losses in the core caused by stator winding, the core can be extended to a length substantially equivalent or greater than a length of stator winding.

  12. Surface-engineered core-shell nano-size ferrites and their antimicrobial activity

    SciTech Connect

    Baraliya, Jagdish D. Joshi, Hiren H.

    2014-04-24

    We report the results of biological study on core-shell structured MFe{sub 2}O{sub 4} (where M = Co, Mn, Ni) nanoparticles and influence of silica- DEG dual coating on their antimicrobial activity. Spherical MFe{sub 2}O{sub 4} nanoparticles were prepared via a Co-precipitation method. The microstructures and morphologies of these nanoparticles were studied by x-ray diffraction and FTIR. The antimicrobial activity study carried out in nutrient agar medium with addition of antimicrobial synthesis compound which is tested for its activity against different types of bacteria.

  13. The Smad3 linker region contains a transcriptional activation domain.

    PubMed

    Wang, Guannan; Long, Jianyin; Matsuura, Isao; He, Dongming; Liu, Fang

    2005-02-15

    Transforming growth factor-beta (TGF-beta)/Smads regulate a wide variety of biological responses through transcriptional regulation of target genes. Smad3 plays a key role in TGF-beta/Smad-mediated transcriptional responses. Here, we show that the proline-rich linker region of Smad3 contains a transcriptional activation domain. When the linker region is fused to a heterologous DNA-binding domain, it activates transcription. We show that the linker region physically interacts with p300. The adenovirus E1a protein, which binds to p300, inhibits the transcriptional activity of the linker region, and overexpression of p300 can rescue the linker-mediated transcriptional activation. In contrast, an adenovirus E1a mutant, which cannot bind to p300, does not inhibit the linker-mediated transcription. The native Smad3 protein lacking the linker region is unable to mediate TGF-beta transcriptional activation responses, although it can be phosphorylated by the TGF-beta receptor at the C-terminal tail and has a significantly increased ability to form a heteromeric complex with Smad4. We show further that the linker region and the C-terminal domain of Smad3 synergize for transcriptional activation in the presence of TGF-beta. Thus our findings uncover an important function of the Smad3 linker region in Smad-mediated transcriptional control.

  14. Intra-annual variations in atmospheric dust and tritium in the North Pacific region detected from an ice core from Mount Wrangell, Alaska

    NASA Astrophysics Data System (ADS)

    Yasunari, Teppei J.; Shiraiwa, Takayuki; Kanamori, Syosaku; Fujii, Yoshiyuki; Igarashi, Makoto; Yamazaki, Koji; Benson, Carl S.; Hondoh, Takeo

    2007-05-01

    The North Pacific is subject to various seasonal climate phenomena and material circulations. Therefore intra-annual ice core data are necessary for an assessment of the climate variations. To assess past variations, a 50-m ice core was drilled at the summit of Mount Wrangell Volcano, Alaska. The dust number, tritium concentrations, and stable hydrogen isotope were analyzed. The period covered was from 1992 to 2002. We found that the concentrations of both fine dust (0.52-1.00 μm), an indicator of long-range transport, and coarse dust (1.00-8.00 μm) increased together every spring. Moreover, their concentrations increased drastically after 2000, corresponding to the recent increase in Asian dust outbreaks in spring. Additionally, an increase in the spring of 2001 corresponded to the largest dust storm recorded in east Asia since 1979. Therefore our findings imply that Asian dust strongly polluted Mount Wrangell every spring. The stratospheric tracer, tritium, had late spring maxima almost every year, and we found this useful for ice core dating to identify late spring in the North Pacific region. We also found that a high positive annual correlation existed between the calculated tritium and fine dust fluxes from late spring to summer. We propose that an annual relationship between the stratosphere-troposphere exchange and Asian dust storm are most closely connected in late spring because their activities are weak in summer. The Mount Wrangell ice core is important and useful for assessing the dust and tritium circulation in the distant past around the North Pacific with probable intra-annual timescale information.

  15. Interactive flare sites within an active region complex

    NASA Technical Reports Server (NTRS)

    Poletto, G.; Gary, G. A.; Machado, M. E.

    1993-01-01

    We examine here a set of images of an active region complex, acquired on June 24-25, 1980, by the Hard X-ray Imaging Spectrometer on SMM, with the purpose of establishing whether there was any interplay between the frequent activity observed at different sites in the activity center and, in such a case, how the interaction was established. By analyzing both quiet and active orbits we show that, as a rule, activity originating in one region triggers the other region's activity. However, we find little unambiguous evidence for the presence of large-scale interconnecting loops. A comparison of X-ray images with magnetic field observations suggested that we interpret the active region behavior in terms of the interaction between different loop systems, in a scenario quite analogous to the interacting bipole representation of individual flares. We conclude that active region interplay provides an easily observable case to study the time-dependent topology and the mechanisms for the spreading of activity in transient events over all energy scales.

  16. Sedimentary record of ice divide migration and ice streams in the Keewatin core region of the Laurentide Ice Sheet

    NASA Astrophysics Data System (ADS)

    Hodder, Tyler J.; Ross, Martin; Menzies, John

    2016-06-01

    The Aberdeen Lake region of central mainland Nunavut is a former core region of the Laurentide Ice Sheet that is characterized by streamlined glacial landforms classified into multiple crosscutting flow sets and near continuous till blanket. The presence of widespread till near the centre of the Keewatin Ice Dome raises questions about its origin. Detailed drillcore logging revealed a complex stratigraphy consisting of at least 6 till units, variably preserved across the study area. Till provenance analysis indicates deposition by near opposite-trending ice flow phases, interpreted as evidence of reconfiguration of the Keewatin Ice Divide. At the surface, large north-northwesterly aligned landforms are present across the study area. The till stratigraphy within these landforms indicates the same NNW ice flow phase is responsible for considerable till production. This ice flow phase is also correlated to a long regional dispersal train of erratics toward the Gulf of Boothia. The production of an extensive, thick (~ 12 m), till sheet during the NNW-trending ice flow phase occurred far from the ice margin at a time of extensive ice cover of mainland Nunavut, likely from an east-west oriented ice divide. A deglacial westerly trending ice flow phase formed small drumlins atop the larger NNW streamlined till ridges and deposited a surficial till unit that is too thin to mask the NNW flow set across the study area. It is proposed that the Boothia paleo-ice stream catchment area propagated deep into the Laurentide Ice Sheet and contributed to significant till production in this core region of the Keewatin Sector prior to the westerly ice flow shift. The apparent relationship between till thickness and the size of the associated or correlated drumlins, flow sets, and dispersal trains indicates complex erosion/deposition interplay is involved in the formation of streamlined subglacial landforms.

  17. Core muscle activity in a series of balance exercises with different stability conditions.

    PubMed

    Calatayud, Joaquin; Borreani, Sebastien; Martin, Julio; Martin, Fernando; Flandez, Jorge; Colado, Juan C

    2015-07-01

    Literature that provides progression models based on core muscle activity and postural manipulations is scarce. The purpose of this study was to investigate the core muscle activity in a series of balance exercises with different stability levels and additional elastic resistance. A descriptive study of electromyography (EMG) was performed with forty-four healthy subjects that completed 12 exercises in a random order. Exercises were performed unipedally or bipedally with or without elastic tubing as resistance on various unstable (uncontrolled multiaxial and uniaxial movement) and stable surfaces. Surface EMG on the lumbar multífidus spinae (LM), thoracic multífidus spinae (TM), lumbar erector spinae (LE), thoracic erector spinae (TE) and gluteus maximus (GM), on the dominant side of the body were collected to quantify the amount of muscle activity and were expressed as a % of the maximum voluntary isometric contraction (MVIC). Significant differences (p<.001) were found between exercises. The three unipedal standing exercises with additional elastic resistance generated the greatest EMG values, ranging from 19% MVIC to 30% MVIC. Postural manipulations with additional elastic resistance and/or unstable devices increase core muscle activity. An adequate exercise progression based on global core EMG could start with seated positions, progressing to bipedal standing stance (i.e., from either multiaxial or stable surface to uniaxial surface). Following this, unipedal standing positions may be performed (i.e., from either multiaxial or stable surface to uniaxial surface) and finally, elastic resistance must be added in order to increase EMG levels (i.e., from stable surface progressing to any of the used unstable surfaces). Copyright © 2015 Elsevier B.V. All rights reserved.

  18. Influence Of Scapular Position On The Core Musculature Activation In The Prone Plank Exercise.

    PubMed

    Cortell-Tormo, Juan M; García-Jaén, Miguel; Chulvi-Medrano, Iván; Hernández-Sánchez, Sergio; Lucas-Cuevas, Ángel G; Tortosa-Martínez, Juan

    2016-10-26

    Prone plank is a widely used exercise in core stability training. Research has shown that pelvic tilt plays an important role on the electromyographical (EMG) activation of core musculature. However, the influence of scapular position on EMG activation is currently unknown. Therefore, this study evaluated the influence of scapular position on the core muscles during a prone plank. Surface electromyography of the rectus abdominis (RA), external oblique (EO), internal oblique (IO) and erector spinae (ES) was collected in fifteen participants (10 men, 5 women). Four variations of the prone plank were evaluated: scapular abduction with anterior (ABANT) and posterior (ABRET) pelvic tilt; and scapular adduction with anterior (ADANT) and posterior (ADRET) pelvic tilt. Individual muscle EMG and overall EMG for each plank exercise was analyzed. Joint positions were controlled with a 2D kinematic analysis. Ratings of perceived effort (RPE) were also registered. ADRET resulted in higher overall EMG activity compared to ABANT (p=0.04) and ADANT (p=0.04). Moreover, ADRET resulted in greater EMG activity compared to ADANT, ABANT, and ABRET for EO (p=0.000; p=0.000; p=0.035), IO (p=0.000; p=0.000; p=0.005) and ES (p=0.019; p=0.001; p=0.014). Regarding RA, ADRET was significantly higher compared to ADANT (p=0.002) and ABANT (p=0.005). Finally, ADRET provoked a higher RPE compared to ABANT (p=0.000), ABRET (p=0.001) and ADANT (p=0.015). These findings demonstrate the influence of the scapular and pelvic position on the EMG response of the core muscle groups analyzed in this study, and highlight the greater contribution of these muscles to the postural stabilizing demands during posterior pelvic tilt positions, particularly when the scapulae are in adduction.

  19. Prediction of Active-Region CME Productivity from Magnetograms

    NASA Technical Reports Server (NTRS)

    Falconer, D. A.; Moore, R. L.; Gary, G. A.

    2004-01-01

    We report results of an expanded evaluation of whole-active-region magnetic measures as predictors of active-region coronal mass ejection (CME) productivity. Previously, in a sample of 17 vector magnetograms of 12 bipolar active regions observed by the Marshall Space Flight Center (MSFC) vector magnetograph, from each magnetogram we extracted a measure of the size of the active region (the active region s total magnetic flux a) and four measures of the nonpotentiality of the active region: the strong-shear length L(sub SS), the strong-gradient length L(sub SG), the net vertical electric current I(sub N), and the net-current magnetic twist parameter alpha (sub IN). This sample size allowed us to show that each of the four nonpotentiality measures was statistically significantly correlated with active-region CME productivity in time windows of a few days centered on the day of the magnetogram. We have now added a fifth measure of active-region nonpotentiality (the best-constant-alpha magnetic twist parameter (alpha sub BC)), and have expanded the sample to 36 MSFC vector magnetograms of 31 bipolar active regions. This larger sample allows us to demonstrate statistically significant correlations of each of the five nonpotentiality measures with future CME productivity, in time windows of a few days starting from the day of the magnetogram. The two magnetic twist parameters (alpha (sub 1N) and alpha (sub BC)) are normalized measures of an active region s nonpotentially in that they do not depend directly on the size of the active region, while the other three nonpotentiality measures (L(sub SS), L(sub SG), and I(sub N)) are non-normalized measures in that they do depend directly on active-region size. We find (1) Each of the five nonpotentiality measures is statistically significantly correlated (correlation confidence level greater than 95%) with future CME productivity and has a CME prediction success rate of approximately 80%. (2) None of the nonpotentiality

  20. Field distribution of magnetograms from simulations of active region formation

    NASA Astrophysics Data System (ADS)

    Dacie, S.; van Driel-Gesztelyi, L.; Démoulin, P.; Linton, M. G.; Leake, J. E.; MacTaggart, D.; Cheung, M. C. M.

    2017-10-01

    Context. The evolution of the photospheric magnetic field distributions (probability densities) has previously been derived for a set of active regions. Photospheric field distributions are a consequence of physical processes that are difficult to determine from observations alone. Aims: We analyse simulated magnetograms from numerical simulations, which model the emergence and decay of active regions. These simulations have different experimental set-ups and include different physical processes, allowing us to investigate the relative importance of convection, magnetic buoyancy, magnetic twist, and braiding for flux emergence. Methods: We specifically studied the photospheric field distributions (probability densities found with a kernel density estimation analysis) and compared the results with those found from observations. Results: Simulations including convection most accurately reproduce the observed evolution of the photospheric field distributions during active region evolution. Conclusions: This indicates that convection may play an important role during the decay phase and also during the formation of active regions, particularly for low flux density values.

  1. Prediction of Active-Region CME Productivity from Magnetograms

    NASA Technical Reports Server (NTRS)

    Falconer, D. A.; Moore, R. L.; Gary, G. A.

    2004-01-01

    We report results of an expanded evaluation of whole-active-region magnetic measures as predictors of active-region coronal mass ejection (CME) productivity. Previously, in a sample of 17 vector magnetograms of 12 bipolar active regions observed by the Marshall Space Flight Center (MSFC) vector magnetograph, from each magnetogram we extracted a measure of the size of the active region (the active region s total magnetic flux a) and four measures of the nonpotentiality of the active region: the strong-shear length L(sub SS), the strong-gradient length L(sub SG), the net vertical electric current I(sub N), and the net-current magnetic twist parameter alpha (sub IN). This sample size allowed us to show that each of the four nonpotentiality measures was statistically significantly correlated with active-region CME productivity in time windows of a few days centered on the day of the magnetogram. We have now added a fifth measure of active-region nonpotentiality (the best-constant-alpha magnetic twist parameter (alpha sub BC)), and have expanded the sample to 36 MSFC vector magnetograms of 31 bipolar active regions. This larger sample allows us to demonstrate statistically significant correlations of each of the five nonpotentiality measures with future CME productivity, in time windows of a few days starting from the day of the magnetogram. The two magnetic twist parameters (alpha (sub 1N) and alpha (sub BC)) are normalized measures of an active region s nonpotentially in that they do not depend directly on the size of the active region, while the other three nonpotentiality measures (L(sub SS), L(sub SG), and I(sub N)) are non-normalized measures in that they do depend directly on active-region size. We find (1) Each of the five nonpotentiality measures is statistically significantly correlated (correlation confidence level greater than 95%) with future CME productivity and has a CME prediction success rate of approximately 80%. (2) None of the nonpotentiality

  2. Observed Helicity of Active Regions in Solar Cycle 21

    NASA Technical Reports Server (NTRS)

    Hagyard, M. J.; Pevtsov, A. A.; Blehm, Z.; Smith, J. E.; Six, Frank (Technical Monitor)

    2003-01-01

    We report the results of a study of helicity in solar active regions during the peak of activity in solar cycle 21 from observations with the Marshall Space Flight Center's solar vector magnetograph. Using the force-free parameter alpha as the proxy for helicity, we calculated an average value of alpha for each of 60 active regions from a total of 449 vector magnetograms that were obtained during the period 1980 March to November. The signs of these average values of alpha were correlated with the latitude of the active regions to test the hemispheric rule of helicity that has been proposed for solar magnetic fields: negative helicity predominant in northern latitudes, positive in the southern ones. We have found that of the 60 regions that were observed, 30 obey the hemispheric rule and 30 do not.

  3. Photospheric Magnetic Free Energy Density of Solar Active Regions

    NASA Astrophysics Data System (ADS)

    Zhang, Hongqi

    2016-12-01

    We present the photospheric energy density of magnetic fields in two solar active regions (one of them recurrent) inferred from observational vector magnetograms, and compare it with other available differently defined energy parameters of magnetic fields in the photosphere. We analyze the magnetic fields in Active Regions NOAA 6580-6619-6659 and 11158. The quantity 1/4π{B}n\\cdot{B}p is an important energy parameter that reflects the contribution of magnetic shear to the difference between the potential (Bp) and the non-potential magnetic field (Bn), and also the contribution to the free magnetic energy near the magnetic neutral lines in the active regions. It is found that the photospheric mean magnetic energy density shows clear changes before the powerful solar flares in Active Region NOAA 11158, which is consistent with the change in magnetic fields in the flaring lower atmosphere.

  4. AFS dynamics in a short-lived active region

    NASA Astrophysics Data System (ADS)

    Zuccarello, F.; Battiato, V.; Contarino, L.; Romano, P.; Spadaro, D.; Vlahos, L.

    2005-11-01

    In the framework of the study on active region emergence, we report the results obtained from the analysis of the short-lived (7 days) active region NOAA 10407. The data used were acquired during an observational campaign carried out with the THEMIS telescope in IPM mode in July 2003, coordinated with other ground- and space-based instruments (INAF-OACT, DOT, BBSO, MDI/SOHO, EIT/SOHO, TRACE). We determined the morphological and magnetic evolution of NOAA 10407, as well as the velocity fields associated with its magnetic structures. Within the limits imposed by the spatial and temporal resolution of the images analyzed, the first evidence of the active region formation is initially observed in the transition region and lower corona, and later on (i.e. after about 7 h) in the inner layers, as found in a previous analysis concerning a long-lived, recurrent active region. The results also indicate that the AFS formed in the active region shows typical upward motion at the AFS's tops and downward motion at the footpoints. The velocity values relevant to the upward motions decrease over the evolution of the region, similarly to the case of the recurrent active region, while we notice an increasing trend in the downflow velocity during the early phases of the time interval analyzed by THEMIS. On the other hand, the AFS preceding legs show a higher downflow than the following ones, a result in contrast with that found in the long-lived active region. The chromospheric area overhanging the sunspot umbra shows an upward motion of ˜ 2 km s-1, while that above the pores shows a downward motion of ~4 km s-1.

  5. DISTRIBUTION OF ELECTRIC CURRENTS IN SOLAR ACTIVE REGIONS

    SciTech Connect

    Török, T.; Titov, V. S.; Mikić, Z.; Leake, J. E.; Archontis, V.; Linton, M. G.; Dalmasse, K.; Aulanier, G.; Kliem, B.

    2014-02-10

    There has been a long-standing debate on the question of whether or not electric currents in solar active regions are neutralized. That is, whether or not the main (or direct) coronal currents connecting the active region polarities are surrounded by shielding (or return) currents of equal total value and opposite direction. Both theory and observations are not yet fully conclusive regarding this question, and numerical simulations have, surprisingly, barely been used to address it. Here we quantify the evolution of electric currents during the formation of a bipolar active region by considering a three-dimensional magnetohydrodynamic simulation of the emergence of a sub-photospheric, current-neutralized magnetic flux rope into the solar atmosphere. We find that a strong deviation from current neutralization develops simultaneously with the onset of significant flux emergence into the corona, accompanied by the development of substantial magnetic shear along the active region's polarity inversion line. After the region has formed and flux emergence has ceased, the strong magnetic fields in the region's center are connected solely by direct currents, and the total direct current is several times larger than the total return current. These results suggest that active regions, the main sources of coronal mass ejections and flares, are born with substantial net currents, in agreement with recent observations. Furthermore, they support eruption models that employ pre-eruption magnetic fields containing such currents.

  6. Active Ageing Level of Older Persons: Regional Comparison in Thailand

    PubMed Central

    Haque, Md. Nuruzzaman

    2016-01-01

    Active ageing level and its discrepancy in different regions (Bangkok, Central, North, Northeast, and South) of Thailand have been examined for prioritizing the policy agenda to be implemented. Attempt has been made to test preliminary active ageing models for Thai older persons and hence active ageing index (AAI, ranges from 0 to 1) has been estimated. Using nationally representative data and confirmatory factor analysis approach, this study justified active ageing models for female and male older persons in Thailand. Results revealed that active ageing level of Thai older persons is not high (mean AAIs for female and male older persons are 0.64 and 0.61, resp., and those are significantly different (p < 0.001)). Mean AAI in Central region is lower than North, Northeast, and South regions but there is no significant difference in the latter three regions of Thailand. Special emphasis should be given to Central region and policy should be undertaken for increasing active ageing level. Implementation of an Integrated Active Ageing Package (IAAP), containing policies for older persons to improve their health and economic security, to promote participation in social groups and longer working lives, and to arrange learning programs, would be helpful for increasing older persons' active ageing level in Thailand. PMID:27375903

  7. 9,400 years of cosmic radiation and solar activity from ice cores and tree rings

    PubMed Central

    Steinhilber, Friedhelm; Beer, Jürg; Brunner, Irene; Christl, Marcus; Fischer, Hubertus; Heikkilä, Ulla; Kubik, Peter W.; Mann, Mathias; McCracken, Ken G.; Miller, Heinrich; Miyahara, Hiroko; Oerter, Hans

    2012-01-01

    Understanding the temporal variation of cosmic radiation and solar activity during the Holocene is essential for studies of the solar-terrestrial relationship. Cosmic-ray produced radionuclides, such as 10Be and 14C which are stored in polar ice cores and tree rings, offer the unique opportunity to reconstruct the history of cosmic radiation and solar activity over many millennia. Although records from different archives basically agree, they also show some deviations during certain periods. So far most reconstructions were based on only one single radionuclide record, which makes detection and correction of these deviations impossible. Here we combine different 10Be ice core records from Greenland and Antarctica with the global 14C tree ring record using principal component analysis. This approach is only possible due to a new high-resolution 10Be record from Dronning Maud Land obtained within the European Project for Ice Coring in Antarctica in Antarctica. The new cosmic radiation record enables us to derive total solar irradiance, which is then used as a proxy of solar activity to identify the solar imprint in an Asian climate record. Though generally the agreement between solar forcing and Asian climate is good, there are also periods without any coherence, pointing to other forcings like volcanoes and greenhouse gases and their corresponding feedbacks. The newly derived records have the potential to improve our understanding of the solar dynamics and to quantify the solar influence on climate. PMID:22474348

  8. 9,400 years of cosmic radiation and solar activity from ice cores and tree rings.

    PubMed

    Steinhilber, Friedhelm; Abreu, Jose A; Beer, Jürg; Brunner, Irene; Christl, Marcus; Fischer, Hubertus; Heikkilä, Ulla; Kubik, Peter W; Mann, Mathias; McCracken, Ken G; Miller, Heinrich; Miyahara, Hiroko; Oerter, Hans; Wilhelms, Frank

    2012-04-17

    Understanding the temporal variation of cosmic radiation and solar activity during the Holocene is essential for studies of the solar-terrestrial relationship. Cosmic-ray produced radionuclides, such as (10)Be and (14)C which are stored in polar ice cores and tree rings, offer the unique opportunity to reconstruct the history of cosmic radiation and solar activity over many millennia. Although records from different archives basically agree, they also show some deviations during certain periods. So far most reconstructions were based on only one single radionuclide record, which makes detection and correction of these deviations impossible. Here we combine different (10)Be ice core records from Greenland and Antarctica with the global (14)C tree ring record using principal component analysis. This approach is only possible due to a new high-resolution (10)Be record from Dronning Maud Land obtained within the European Project for Ice Coring in Antarctica in Antarctica. The new cosmic radiation record enables us to derive total solar irradiance, which is then used as a proxy of solar activity to identify the solar imprint in an Asian climate record. Though generally the agreement between solar forcing and Asian climate is good, there are also periods without any coherence, pointing to other forcings like volcanoes and greenhouse gases and their corresponding feedbacks. The newly derived records have the potential to improve our understanding of the solar dynamics and to quantify the solar influence on climate.

  9. Shell-anchor-core structures for enhanced stability and catalytic oxygen reduction activity

    NASA Astrophysics Data System (ADS)

    Ramirez-Caballero, Gustavo E.; Hirunsit, Pussana; Balbuena, Perla B.

    2010-10-01

    Density functional theory is used to evaluate activity and stability properties of shell-anchor-core structures. The structures consist of a Pt surface monolayer and a composite core having an anchor bilayer where C atoms in the interstitial sites lock 3d metals in their locations, thus avoiding their surface segregation and posterior dissolution. The modified subsurface geometry induces less strain on the top surface, thus exerting a favorable effect on the surface catalytic activity where the adsorption strength of the oxygenated species becomes more moderate: weaker than on pure Pt(111) but stronger than on a Pt monolayer having a 3d metal subsurface. Here we analyze the effect of changing the nature of the 3d metal in the subsurface anchor bilayer, and we also test the use of a Pd monolayer instead of Pt on the surface. It is found that a subsurface constituted by two layers with an approximate composition of M2C (M=Fe, Ni, and Co) provides a barrier for the migration of subsurface core metal atoms to the surface. Consequently, an enhanced resistance against dissolution in parallel to improved oxygen reduction activity is expected, as given by the values of adsorption energies of reaction intermediates, delayed onset of water oxidation, and/or low coverage of oxygenated species at surface oxidation potentials.

  10. Solar Irradiance Variations on Active Region Time Scales

    NASA Technical Reports Server (NTRS)

    Labonte, B. J. (Editor); Chapman, G. A. (Editor); Hudson, H. S. (Editor); Willson, R. C. (Editor)

    1984-01-01

    The variations of the total solar irradiance is an important tool for studying the Sun, thanks to the development of very precise sensors such as the ACRIM instrument on board the Solar Maximum Mission. The largest variations of the total irradiance occur on time scales of a few days are caused by solar active regions, especially sunspots. Efforts were made to describe the active region effects on total and spectral irradiance.

  11. Photospheric Magnetic Diffusion by Measuring Moments of Active Regions

    NASA Astrophysics Data System (ADS)

    Engell, Alexander; Longcope, D.

    2013-07-01

    Photospheric magnetic surface diffusion is an important constraint for the solar dynamo. The HMI Active Region Patches (HARPs) program automatically identify all magnetic regions above a certain flux. In our study we measure the moments of ARs that are no longer actively emerging and can thereby give us good statistical constraints on photospheric diffusion. We also present the diffusion properties as a function of latitude, flux density, and single polarity (leading or following) within each HARP.

  12. The nature of chromospheric active regions on V410 Tauri

    NASA Astrophysics Data System (ADS)

    Mekkaden, M. V.; Pukalenthi, S.; Muneer, S.; Bastian, Anju Barbara

    2005-12-01

    We present spectroscopic observations in the region of H alpha and Li I lines of the weak emission T Tauri star V410 Tau obtained over 1999/2000, 2002/2003 and 2003/2004 seasons. The emission strength showed rotational modulation during the 1999/2000 season in such a way that the emis- sion strength is maximum at light minimum and vice versa. This indicates that the photospheric and chromospheric active regions overlap over shorter dura- tions of time and the lifetimes of chromospheric active regions are far shorter than the photospheric active regions. But the observations obtained during the 2003/2004 season do not follow the trend observed at earlier seasons. This can be due to the change in the location of chromospheric active regions. Another possibility is the occurrence of a major change in the photospheric active re- gions that have caused a redistribution of photospheric as well as chromospheric active regions. The Li I EW does not show any appreciable change over the four-year period.

  13. Studying the transfer of magnetic helicity in solar active regions

    NASA Astrophysics Data System (ADS)

    Dalmasse, Kevin; Valori, Gherardo; Jing, Ju; Pariat, Etienne; Demoulin, Pascal

    2017-08-01

    Analyzing the transfer of magnetic helicity in active regions is a key component for understanding the nature of its coronal storage and release and for identifying its role in the coronal dynamics of active regions. We recently developed a method for studying the photospheric flux of magnetic helicity in both 2D and 3D. The method takes into account the 3D nature of magnetic helicity by explicitly using knowledge of the magnetic field connectivity. Since the coronal magnetic field in active regions is not measured, we rely on the non-unique 3D solution obtained from force-free coronal magnetic field extrapolations to derive the magnetic field connectivity. In this poster, we apply the method to the complex and highly-flaring active region NOAA 11158 using the magnetic field connectivity derived from different force-free extrapolation models and implementations. We show that the calculations of photospheric flux of magnetic helicity are robust to different extrapolation methods and assumptions, in particular with regards to identifying regions of opposite magnetic helicity flux. Finally, we discuss the implications of our results for tracking the transfer of magnetic helicity in active regions and relate it to their flaring activity.

  14. Rice Cellulose SynthaseA8 Plant-Conserved Region Is a Coiled-Coil at the Catalytic Core Entrance1[OPEN

    PubMed Central

    Rushton, Phillip S.; Olek, Anna T.; Makowski, Lee; Badger, John

    2017-01-01

    The crystallographic structure of a rice (Oryza sativa) cellulose synthase, OsCesA8, plant-conserved region (P-CR), one of two unique domains in the catalytic domain of plant CesAs, was solved to 2.4 Å resolution. Two antiparallel α-helices form a coiled-coil domain linked by a large extended connector loop containing a conserved trio of aromatic residues. The P-CR structure was fit into a molecular envelope for the P-CR domain derived from small-angle X-ray scattering data. The P-CR structure and molecular envelope, combined with a homology-based chain trace of the CesA8 catalytic core, were modeled into a previously determined CesA8 small-angle X-ray scattering molecular envelope to produce a detailed topological model of the CesA8 catalytic domain. The predicted position for the P-CR domain from the molecular docking models places the P-CR connector loop into a hydrophobic pocket of the catalytic core, with the coiled-coil aligned near the entrance of the substrate UDP-glucose into the active site. In this configuration, the P-CR coiled-coil alone is unlikely to regulate substrate access to the active site, but it could interact with other domains of CesA, accessory proteins, or other CesA catalytic domains to control substrate delivery. PMID:27879387

  15. Active Region Moss: Doppler Shifts from Hinode/Extreme-ultraviolet Imaging Spectrometer Observations

    NASA Astrophysics Data System (ADS)

    Tripathi, Durgesh; Mason, Helen E.; Klimchuk, James A.

    2012-07-01

    Studying the Doppler shifts and the temperature dependence of Doppler shifts in moss regions can help us understand the heating processes in the core of the active regions. In this paper, we have used an active region observation recorded by the Extreme-ultraviolet Imaging Spectrometer (EIS) on board Hinode on 2007 December 12 to measure the Doppler shifts in the moss regions. We have distinguished the moss regions from the rest of the active region by defining a low-density cutoff as derived by Tripathi et al. in 2010. We have carried out a very careful analysis of the EIS wavelength calibration based on the method described by Young et al. in 2012. For spectral lines having maximum sensitivity between log T = 5.85 and log T = 6.25 K, we find that the velocity distribution peaks at around 0 km s-1 with an estimated error of 4-5 km s-1. The width of the distribution decreases with temperature. The mean of the distribution shows a blueshift which increases with increasing temperature and the distribution also shows asymmetries toward blueshift. Comparing these results with observables predicted from different coronal heating models, we find that these results are consistent with both steady and impulsive heating scenarios. However, the fact that there are a significant number of pixels showing velocity amplitudes that exceed the uncertainty of 5 km s-1 is suggestive of impulsive heating. Clearly, further observational constraints are needed to distinguish between these two heating scenarios.

  16. Twist of Magnetic Fields in Solar Active Regions

    NASA Astrophysics Data System (ADS)

    Zhang, Hongqi; Bao, Shudong; Kuzanyan, Kirill M.

    2002-05-01

    We study the twist properties of photospheric magnetic fields in solar active regions using magnetographic data on 422 active regions obtained at the Huairou Solar Observing Station in 1988 1997. We calculate the mean twist (force-free field αf) of the active regions and compare it with the mean current-helicity density of these same active regions, h c =B ∥·(∇×B)∥. The latitude and longitude distributions and time dependence of these quantities is analyzed. These parameters represent two different tracers of the α effect in dynamo theory, so we might expect them to possess similar properties. However, apart from differences in their definitions, they also display differences associated with the technique used to recalculate the magnetographic data and with their different physical meanings. The distributions of the mean αf and h c both show hemispherical asymmetry—negative (positive) values in the northern (southern) hemisphere—although this tendency is stronger for h c. One reason for these differences may be the averaging procedure, when twists of opposite sign in regions with weak fields make a small contribution to the mean current-helicity density. Such transequatorial regularity is in agreement with the expectations of dynamo theory. In some active regions, the average αf and h c do not obey this transequatorial rule. As a whole, the mean twist of the magnetic fields αf of active regions does not vary significantly with the solar cycle. Active regions that do not follow the general behavior for αf do not show any appreciable tendency to cluster at certain longitudes, in contrast to results for h c noted in previous studies. We analyze similarities and differences in the distributions of these two quantities. We conclude that using only one of these tracers, such as αf, to search for signatures of the α effect can have disadvantages, which should be taken into account in future studies.

  17. SDO/HMI survey of emerging active regions for helioseismology

    NASA Astrophysics Data System (ADS)

    Schunker, H.; Braun, D. C.; Birch, A. C.; Burston, R. B.; Gizon, L.

    2016-11-01

    Context. Observations from the Solar Dynamics Observatory (SDO) have the potential for allowing the helioseismic study of the formation of hundreds of active regions, which would enable us to perform statistical analyses. Aims: Our goal is to collate a uniform data set of emerging active regions observed by the SDO/HMI instrument suitable for helioseismic analysis, where each active region is centred on a 60° × 60° area and can be observed up to seven days before emergence. Methods: We restricted the sample to active regions that were visible in the continuum and emerged into quiet Sun largely avoiding pre-existing magnetic regions. As a reference data set we paired a control region (CR), with the same latitude and distance from central meridian, with each emerging active region (EAR). The control regions do not have any strong emerging flux within 10° of the centre of the map. Each region was tracked at the Carrington rotation rate as it crossed the solar disk, within approximately 65° from the central meridian and up to seven days before, and seven days after, emergence. The mapped and tracked data, consisting of line-of-sight velocity, line-of-sight magnetic field, and intensity as observed by SDO/HMI, are stored in datacubes that are 410 min in duration and spaced 320 min apart. We call this data set, which is currently comprised of 105 emerging active regions observed between May 2010 and November 2012, the SDO Helioseismic Emerging Active Region (SDO/HEAR) survey. Results: To demonstrate the utility of a data set of a large number of emerging active regions, we measure the relative east-west velocity of the leading and trailing polarities from the line-of-sight magnetogram maps during the first day after emergence. The latitudinally averaged line-of-sight magnetic field of all the EARs shows that, on average, the leading (trailing) polarity moves in a prograde (retrograde) direction with a speed of 121 ± 22 m s-1 (-70 ± 13 m s-1) relative to the

  18. Earth resources-regional transfer activity contracts review

    NASA Technical Reports Server (NTRS)

    Bensko, J., Jr.; Daniels, J. L.; Downs, S. W., Jr.; Jones, N. L.; Morton, R. R.; Paludan, C. T.

    1977-01-01

    A regional transfer activity contracts review held by the Earth Resources Office was summarized. Contracts in the earth resources field primarily directed toward applications of satellite data and technology in solution of state and regional problems were reviewed. A summary of the progress of each contract was given in order to share experiences of researchers across a seven state region. The region included Missouri, Kentucky, Tennessee, Mississippi, Alabama, Georgia, and North Carolina. Research in several earth science disciplines included forestry, limnology, water resources, land use, geology, and mathematical modeling. The use of computers for establishment of information retrieval systems was also emphasized.

  19. Thoughts on the development of active regional public health systems.

    PubMed

    Reis, Ademar Arthur Chioro Dos; Sóter, Ana Paula Menezes; Furtado, Lumena Almeida Castro; Pereira, Silvana Souza da Silva

    2017-04-01

    Decentralization and regionalization are strategic themes for reforms in the health system. This paper analyzes the complex process of health regionalization being developed in Brazil. This paper identifies that the normative framework from the Brazilian National Health System, SUS has made advances with respect to its institutionalization and overcoming the initial centrality involved in municipalization. This has strengthened the development of regionalization and the intergovernmental agreement on health but the evidence points to the need to promote a revision. Based on document analysis, literature review and the views given by the authors involved in management in SUS as well as generating radically different views, the challenges for the construction of a regionalization that is active, is debated. We also discuss: its relations with planning and the dimensioning of service networks, the production of active care networks and shared management spaces, the inter-federative agreements and regional regulations, the capacity to coordinate regional systems and financing and the impact of the political dimension and electoral cycles. Regionalization (and SUS itself) is an open book, therefore ways and possibilities on how to maintain an active form of regionalization can be recommended.

  20. Cereblon inhibits proteasome activity by binding to the 20S core proteasome subunit beta type 4.

    PubMed

    Lee, Kwang Min; Lee, Jongwon; Park, Chul-Seung

    2012-10-26

    In humans, mutations in the gene encoding cereblon (CRBN) are associated with mental retardation. Although CRBN has been investigated in several cellular contexts, its function remains unclear. Here, we demonstrate that CRBN plays a role in regulating the ubiquitin-proteasome system (UPS). Heterologous expression of CRBN inhibited proteasome activity in a human neuroblastoma cell line. Furthermore, proteasome subunit beta type 4 (PSMB4), the β7 subunit of the 20S core complex, was identified as a direct binding partner of CRBN. These findings suggest that CRBN may modulate proteasome activity by directly interacting with the β7 subunit.

  1. Predictions of active region flaring probability using subsurface helicity measurements

    NASA Astrophysics Data System (ADS)

    Reinard, A. A.; Komm, R.; Hill, F.

    2010-12-01

    Solar flares are responsible for a number of hazardous effects on the earth such as disabling high-frequency radio communications, interfering with GPS measurements, and disrupting satellites. However, forecasting flare occurrence is currently very difficult. One possible means for predicting flare occurrence lies in helioseismology, i.e. analysis of the region below the active region for signs of an impending flare. Time series helioseismic data collected by the Global Oscillation Network Group (GONG) has been analyzed for a subset of active regions that produce large flares and a subset with very high magnetic field strength that produce no flares. A predictive parameter has been developed and analyzed using discriminant analysis as well as traditional forecasting tools such as the Heidke skill score. Preliminary results show that this parameter predicts the flaring probability of an active region 2-3 days in advance with a relatively high degree of success.

  2. Differential Magnetic Field Shear in an Active Region

    NASA Technical Reports Server (NTRS)

    Schmeider, B.; DeMoulin, P.; Aulanier, G.; Golub, Leon

    1997-01-01

    The three-dimensional extrapolation of magnetic field lines from a magnetogram obtained at Kitt Peak allows us to understand the global structure of the NOAA active region 6718, as observed in X-rays with the Normal Incidence X-ray Telescope (NIXT) and in Ha with the Multichannel Subtractive Double Pass spectrograph (MSDP) in Meudon on 1991 July 11. This active region was in a quiet stage. Bright X-ray loops connect plages having field strengths of approx. 300 G, while H-alpha fibriles connect penumbrae having strong spot fields to the surrounding network. Small, intense X-ray features in the moat region around a large spot, which could be called X-ray-bright points, are due mainly to the emergence of magnetic flux and merging of these fields with surrounding ones. A set of large-scale, sheared X-ray loops is observed in the central part of the active region. Based on the fit between the observed coronal structure and the field configurations (and assuming a linear force-free field), we propose a differential magnetic field shear model for this active region. The decreasing shear in outer portions of the active region may indicate a continual relaxation of the magnetic field to a lower energy state in the progressively older portions of the AR.

  3. Helium Line Formation and Abundance in a Solar Active Region

    NASA Astrophysics Data System (ADS)

    Mauas, P. J. D.; Andretta, V.; Falchi, A.; Falciani, R.; Teriaca, L.; Cauzzi, G.

    2005-01-01

    An observing campaign (SOHO JOP 139), coordinated between ground-based and Solar and Heliospheric Observatory (SOHO) instruments, has been planned to obtain simultaneous spectroheliograms of the same active region in several spectral lines. The chromospheric lines Ca II K, Hα, and Na I D, as well as He I 10830, 5876, 584, and He II 304 Å lines have been observed. The EUV radiation in the range λ<500 Å and in the range 260<λ<340 Å has also been measured at the same time. These simultaneous observations allow us to build semiempirical models of the chromosphere and low transition region of an active region, taking into account the estimated total number of photoionizing photons impinging on the target active region and their spectral distribution. We obtained a model that matches very well all the observed line profiles, using a standard value for the He abundance ([He]=0.1) and a modified distribution of microturbulence. For this model we study the influence of the coronal radiation on the computed helium lines. We find that, even in an active region, the incident coronal radiation has a limited effect on the UV He lines, while it is of fundamental importance for the D3 and 10830 Å lines. Finally, we build two more models, assuming values of He abundance [He]=0.07 and 1.5, only in the region where temperatures are >1×104 K. This region, between the chromosphere and transition region, has been indicated as a good candidate for processes that might be responsible for strong variations of [He]. The set of our observables can still be well reproduced in both cases, changing the atmospheric structure mainly in the low transition region. This implies that, to choose between different values of [He], it is necessary to constrain the transition region with different observables, independent of the He lines.

  4. [Active surveillance of localized prostate cancer. Significance of prostate core needle biopsies].

    PubMed

    Rüschoff, J; Middel, P; Albers, P

    2008-09-01

    Today, more than 80% of men diagnosed with prostate cancer (PCA) by PSA screening do not die from the sequelae of their disease. About 70% present with early, organ-confined cancer and almost half of them are small (<5 cm(3)) without evidence of progression over years (insignificant PCA). It is assumed that screening brings the diagnosis of PCA forward by about 9 years and that in almost one third of these cases immediate radical prostatectomy or radiotherapy would result in overtreatment. Thus, the treatment strategy of "active surveillance" with selective but delayed intervention for patients with organ-confined PCA could be an attractive alternative to the known curative therapy options. However, a prerequisite of such a therapeutic approach would be a precise identification of patients at high risk for cancer progression. Careful work-up of prostate core needle biopsies including improved pre-embedding preparation and detailed interpretation are of the utmost importance. A Gleason score < or =6 and tumor in only one or two cores are considered predictive of organ-confined cancer. Pathologists should concentrate on correct Gleason scoring in core needle biopsies and identification of lesions that exclude a patient from active surveillance.

  5. Cometary cores with multiple structure from the oort cloud and the general scheme of origin of unusually active comets

    SciTech Connect

    Davydov, V.D.

    1986-03-01

    A newly conceived scheme is constructed which synthesizes consistent solutions to several principal problems concerning multiple-core comets: a power mechanism, a place and epoch of formation of the multiple core structure, the qualitative differences between current structure and younger structure, the origin of two types of cometary orbits, and a trigger mechanism for recent ignition of cometary activity of a multiple core. This scheme uses a new explanation of the ejection of dust (including icy dust) from various cometary cores as evidence that the material of multiple-core comets may be collisionally ablated at the expense of the comet-centered orbital energy of a multitude of massive boulders (see Kosm. Issled., No. 6 (1984)). Natural mechanisms are shown which preserve this important feature of multiple cores. The concept consists of the following elements: evolution of a system of satellites of the core toward a colli sionless structure; preservation of internal kinetic energy in the collisionless system over astro nomically lengthy time scales; tidal initiation of a collisional mechanism with the first revolution of the ancient multiple core in the zone of visibility. It is possible that such revoltions correspond to the existence of especially active comets in nearly parabolic orbits. Multiple structure in the core of active short-period comets might be descended from a nearly parabolic comet (if the theory holds on perturbational multistage transformation of near-parabolic orbits into contemporary short-period orbits).

  6. IFLA General Conference, 1985. Division on Regional Activities. Papers.

    ERIC Educational Resources Information Center

    International Federation of Library Associations, The Hague (Netherlands).

    Papers on regional library activities which were presented at the 1985 International Federation of Library Associations (IFLA) conference include: (1) "Importance of Information Resources in National Development with Particular Reference to the Asian Scene" (Yogendra P. Dubey, India); (2) "Report of the Activities of the Regional…

  7. IFLA General Conference, 1985. Division on Regional Activities. Papers.

    ERIC Educational Resources Information Center

    International Federation of Library Associations, The Hague (Netherlands).

    Papers on regional library activities which were presented at the 1985 International Federation of Library Associations (IFLA) conference include: (1) "Importance of Information Resources in National Development with Particular Reference to the Asian Scene" (Yogendra P. Dubey, India); (2) "Report of the Activities of the Regional…

  8. Universities and Economic Development Activities: A UK Regional Comparison

    ERIC Educational Resources Information Center

    Decter, Moira; Cave, Frank; Rose, Mary; Peers, Gill; Fogg, Helen; Smith, Susan M.

    2011-01-01

    A number of UK universities prioritize economic development or regeneration activities and for some of these universities such activities are the main focus of their knowledge transfer work. This study compares two regions of the UK--the North West and the South East of England--which have very different levels of economic performance.…

  9. Universities and Economic Development Activities: A UK Regional Comparison

    ERIC Educational Resources Information Center

    Decter, Moira; Cave, Frank; Rose, Mary; Peers, Gill; Fogg, Helen; Smith, Susan M.

    2011-01-01

    A number of UK universities prioritize economic development or regeneration activities and for some of these universities such activities are the main focus of their knowledge transfer work. This study compares two regions of the UK--the North West and the South East of England--which have very different levels of economic performance.…

  10. Regional heterothermy and conservation of core temperature in emperor penguins diving under sea ice.

    PubMed

    Ponganis, P J; Van Dam, R P; Levenson, D H; Knower, T; Ponganis, K V; Marshall, G

    2003-07-01

    extension of aerobic dive time in emperor penguins diving at the isolated dive hole. Such high temperatures within the body and the observed decreases in limb, anterior abdomen, subcutaneous and sub-feather temperatures are consistent with preservation of core temperature and cooling of an outer body shell secondary to peripheral vasoconstriction, decreased insulation of the feather layer, and conductive/convective heat loss to the water environment during the diving of these emperor penguins.

  11. Enhanced photocatalytic activity of C@ZnO core-shell nanostructures and its photoluminescence property

    NASA Astrophysics Data System (ADS)

    Chen, Tao; Yu, Shanwen; Fang, Xiaoxin; Huang, Honghong; Li, Lun; Wang, Xiuyuan; Wang, Huihu

    2016-12-01

    An ultrathin layer of amorphous carbon coated C@ZnO core-shell nanostructures were synthesized via a facile hydrothermal carbonization process using glucose as precursor in this work. X-ray diffraction (XRD), field emission scanning electron microscopy (FESEM), transmission electron microscopy (TEM), X-ray photoelectron spectroscopy (XPS) and diffuse reflectance UV-vis spectroscopy (DRS) were used for the characterization of as-prepared samples. Photoluminescence (PL) properties of C@ZnO samples were investigated using PL spectroscopy. The microstructure analysis results show that the glucose content has a great influence on the size, morphology, crystallinity and surface chemical states of C@ZnO nanostructures. Moreover, the as-prepared C@ZnO core-shell nanostructures exhibit the enhanced photocatalytic activity and good photostability for methyl orange dye degradation due to its high adsorption ability and its improved optical characteristics.

  12. Do ICF core sets for low back pain include patients' self-reported activity limitations because of back problems?

    PubMed

    Lygren, Hildegunn; Strand, Liv Inger; Anderson, Bodil; Magnussen, Liv Heide

    2014-06-01

    The aim of this study was to investigate content validity of the International Classification of Functioning, Disability and Health (ICF) Core Sets for low back pain (LBP), by examining whether common activities reported as difficult to perform are included in the Core Sets. A cross-sectional design was used. Ninety-eight patients with long-lasting back pain (>3 months) between 18 and 65 years of age were consecutively recruited from a Multidisciplinary Outpatient Spine Clinic. Difficulties with daily life and work task activities because of back pain were examined by asking the patients two questions: 1) can you specify activities that are difficult to perform because of your back pain? and 2) are there specific work tasks that you are unable to do because of your back pain? Two raters independently classified the written responses according to the ICF Core Sets' component Activities and Participation. Activities and work tasks were linked to 15 of 29 categories (52%) in the Comprehensive Core Set, and 9 of 12 (75%) in the Brief Core Set, and the initial agreement between the two raters in coding the answers according to the Core Sets was (83%, k = 0.80) and (93%, k = 0.9), respectively, before consensus was reached. The Comprehensive Core Set for LBP to a large degree contains daily life and work-related activities frequently reported as difficult to perform by patients with long-lasting LBP. The categories, however, are very broad and do not provide specified descriptions of the most frequently reported activity limitations such as sitting, standing and walking. The Brief Core Set does not include categories for frequently reported activities such as pulling/pushing and leisure/recreation activities. ICF Core Sets for LBP seem suitable for obtaining a gross overview of the patients' functional limitations, but do not give sufficient information from a therapeutic point of view. © 2013 John Wiley & Sons, Ltd.

  13. Single‐molecule mechanochemical characterization of E. coli pol III core catalytic activity

    PubMed Central

    Naufer, M. Nabuan; Murison, David A.; Rouzina, Ioulia; Beuning, Penny J.

    2017-01-01

    Abstract Pol III core is the three‐subunit subassembly of the E. coli replicative DNA polymerase III holoenzyme. It contains the catalytic polymerase subunit α, the 3′ → 5′ proofreading exonuclease ε, and a subunit of unknown function, θ. We employ optical tweezers to characterize pol III core activity on a single DNA substrate. We observe polymerization at applied template forces F < 25 pN and exonucleolysis at F > 30 pN. Both polymerization and exonucleolysis occur as a series of short bursts separated by pauses. For polymerization, the initiation rate after pausing is independent of force. In contrast, the exonucleolysis initiation rate depends strongly on force. The measured force and concentration dependence of exonucleolysis initiation fits well to a two‐step reaction scheme in which pol III core binds bimolecularly to the primer‐template junction, then converts at rate k 2 into an exo‐competent conformation. Fits to the force dependence of k init show that exo initiation requires fluctuational opening of two base pairs, in agreement with temperature‐ and mismatch‐dependent bulk biochemical assays. Taken together, our results support a model in which the pol and exo activities of pol III core are effectively independent, and in which recognition of the 3′ end of the primer by either α or ε is governed by the primer stability. Thus, binding to an unstable primer is the primary mechanism for mismatch recognition during proofreading, rather than an alternative model of duplex defect recognition. PMID:28263430

  14. Short scale variation in presence and structure of complex core-mantle boundary regions beneath northern Mexico

    NASA Astrophysics Data System (ADS)

    Jasbinsek, J. J.

    2016-12-01

    A set of nine intermediate depth earthquakes with closely spaced epicenters in Central America recorded at a small aperture array in the western United States contain clear core-mantle boundary (CMB) reflections. Cross-correlation of [0.5,2] Hz bandpass filtered seismograms at the 11 station array results in well-constrained stacked PcP and ScP waveforms. Most events contain both PcP and ScP waveforms, providing two distinct areas of core-mantle boundary sampling. In approximately half of the stacked waveforms, additional pre- and/or post-cursory arrivals are observed with both PcP and ScP suggesting the presence of complicated CMB structures. Commonly the extra arrivals have the visual appearance of reverberations. Two primary observations are made: (1) One-dimensional forward modeling indicates that simple one-layer ultra-low velocity zone (ULVZ) models do not accurately reproduce the PcP and ScP waveforms, instead multi-layer ULVZ models provide a better fit to the waveforms, (2) Spatially the pattern of CMB regions requiring extra structure is contiguous, but change to a simple CMB structure over short distance scales. The simple one-dimensional modeling explored here cannot uniquely constrain the three-dimensional CMB structure, but provides insight into potential CMB structure that may be resolvable with higher accuracy and more computationally intensive forward seismogram modeling.

  15. Interchromosomal core duplicons drive both evolutionary instability and disease susceptibility of the Chromosome 8p23.1 region

    PubMed Central

    Mohajeri, Kiana; Cantsilieris, Stuart; Huddleston, John; Nelson, Bradley J.; Coe, Bradley P.; Campbell, Catarina D.; Baker, Carl; Harshman, Lana; Munson, Katherine M.; Kronenberg, Zev N.; Kremitzki, Milinn; Raja, Archana; Catacchio, Claudia Rita; Graves, Tina A.; Wilson, Richard K.; Ventura, Mario; Eichler, Evan E.

    2016-01-01

    Recurrent rearrangements of Chromosome 8p23.1 are associated with congenital heart defects and developmental delay. The complexity of this region has led to inconsistencies in the current reference assembly, confounding studies of genetic variation. Using comparative sequence-based approaches, we generated a high-quality 6.3-Mbp alternate reference assembly of an inverted Chromosome 8p23.1 haplotype. Comparison with nonhuman primates reveals a 746-kbp duplicative transposition and two separate inversion events that arose in the last million years of human evolution. The breakpoints associated with these rearrangements map to an ape-specific interchromosomal core duplicon that clusters at sites of evolutionary inversion (P = 7.8 × 10−5). Refinement of microdeletion breakpoints identifies a subgroup of patients that map to the same interchromosomal core involved in the evolutionary formation of the duplication blocks. Our results define a higher-order genomic instability element that has shaped the structure of specific chromosomes during primate evolution contributing to rearrangements associated with inversion and disease. PMID:27803192

  16. Activated region fitting: a robust high-power method for fMRI analysis using parameterized regions of activation.

    PubMed

    Weeda, Wouter D; Waldorp, Lourens J; Christoffels, Ingrid; Huizenga, Hilde M

    2009-08-01

    An important issue in the analysis of fMRI is how to account for the spatial smoothness of activated regions. In this article a method is proposed to accomplish this by modeling activated regions with Gaussian shapes. Hypothesis tests on the location, spatial extent, and amplitude of these regions are performed instead of hypothesis tests of individual voxels. This increases power and eases interpretation. Simulation studies show robust hypothesis tests under misspecification of the shape model, and increased power over standard techniques especially at low signal-to-noise ratios. An application to real single-subject data also indicates that the method has increased power over standard methods.

  17. Deep-Sequencing Analysis of the Association between the Quasispecies Nature of the Hepatitis C Virus Core Region and Disease Progression

    PubMed Central

    Miura, Mika; Takano, Shinichi; Komatsu, Nobutoshi; Tatsumi, Akihisa; Asakawa, Yukiko; Shindo, Kuniaki; Amemiya, Fumitake; Nakayama, Yasuhiro; Inoue, Taisuke; Sakamoto, Minoru; Yamashita, Atsuya; Moriishi, Kohji; Enomoto, Nobuyuki

    2013-01-01

    Variation of core amino acid (aa) 70 of hepatitis C virus (HCV) has been shown recently to be closely correlated with liver disease progression, suggesting that the core region might be present as a quasispecies during persistent infection and that this quasispecies nature might have an influence on the progression of disease. In our investigation, the subjects were 79 patients infected with HCV genotype 1b (25 with chronic hepatitis [CH], 29 with liver cirrhosis [LC], and 25 with hepatocellular carcinoma [HCC]). Deep sequencing of the HCV core region was carried out on their sera by using a Roche 454 GS Junior pyrosequencer. Based on a plasmid containing a cloned HCV sequence (pCV-J4L6S), the background error rate associated with pyrosequencing, including the PCR procedure, was calculated as 0.092 ± 0.005/base. Deep sequencing of the core region in the clinical samples showed a mixture of “mutant-type” Q/H and “wild-type” R at the core aa 70 position in most cases (71/79 [89.9%]), and the ratio of mutant residues to R in the mixture increased as liver disease advanced to LC and HCC. Meanwhile, phylogenetic analysis of the almost-complete core region revealed that the HCV isolates differed genetically depending on the mutation status at core aa 70. We conclude that the core aa 70 mixture ratio, determined by deep sequencing, reflected the status of liver disease, demonstrating a significant association between core aa 70 and disease progression in CH patients infected with HCV genotype 1b. PMID:23946458

  18. Dynamics of active regions observed with Hinode XRT

    NASA Astrophysics Data System (ADS)

    Sakao, Taro

    We present dynamics of active regions observed with the X-Ray Telescope (XRT) aboard Hinode. XRT is a grazing-incidence imager with a Walter Type-I-like mirror of 34 cm diameter with a back-illuminated CCD device. The XRT can image the X-ray corona of the Sun with angular resolution consistent with 1 arcsec CCD pixel size. In addition to this unprecedentedly-high angular resolution ever achieved as a solar X-ray telescope, enhanced sensitivity of the CCD towards longer X-ray wavelengths (particularly beyond 50 Angstroms) enables XRT to image, and perform temperature diagnostics on, a wide range of coronal plasmas from those as low as 1 MK to high-temperature plasmas even exceeding 10 MK. This adds a notable advantage to the XRT such that it can observe most, if not all, active phenomena taking place in and around active regions. Since the beginning of observations with XRT on 23 October 2006, the XRT has so far made various interesting observations regarding active regions. These include (1) continuous outflow of plasmas from the edge of a solar active region that is likely to be a source of (slow) solar wind, (2) clear signature of eruptions for activities even down to GOES B-level, (3) detailed structure and evolution of flaring loops, (4) formation of large-scale hot loops around active regions, and so on. Dynamic phenomena in and around active regions observed with Hinode XRT will be presented and their possible implications to the Sun-Earth connection investigation will be discussed.

  19. Lattice-strain control of the activity in dealloyed core-shell fuel cell catalysts.

    PubMed

    Strasser, Peter; Koh, Shirlaine; Anniyev, Toyli; Greeley, Jeff; More, Karren; Yu, Chengfei; Liu, Zengcai; Kaya, Sarp; Nordlund, Dennis; Ogasawara, Hirohito; Toney, Michael F; Nilsson, Anders

    2010-06-01

    Electrocatalysis will play a key role in future energy conversion and storage technologies, such as water electrolysers, fuel cells and metal-air batteries. Molecular interactions between chemical reactants and the catalytic surface control the activity and efficiency, and hence need to be optimized; however, generalized experimental strategies to do so are scarce. Here we show how lattice strain can be used experimentally to tune the catalytic activity of dealloyed bimetallic nanoparticles for the oxygen-reduction reaction, a key barrier to the application of fuel cells and metal-air batteries. We demonstrate the core-shell structure of the catalyst and clarify the mechanistic origin of its activity. The platinum-rich shell exhibits compressive strain, which results in a shift of the electronic band structure of platinum and weakening chemisorption of oxygenated species. We combine synthesis, measurements and an understanding of strain from theory to generate a reactivity-strain relationship that provides guidelines for tuning electrocatalytic activity.

  20. Polymer-inorganic core-shell nanofibers by electrospinning and atomic layer deposition: flexible nylon-ZnO core-shell nanofiber mats and their photocatalytic activity.

    PubMed

    Kayaci, Fatma; Ozgit-Akgun, Cagla; Donmez, Inci; Biyikli, Necmi; Uyar, Tamer

    2012-11-01

    Polymer-inorganic core-shell nanofibers were produced by two-step approach; electrospinning and atomic layer deposition (ALD). First, nylon 6,6 (polymeric core) nanofibers were obtained by electrospinning, and then zinc oxide (ZnO) (inorganic shell) with precise thickness control was deposited onto electrospun nylon 6,6 nanofibers using ALD technique. The bead-free and uniform nylon 6,6 nanofibers having different average fiber diameters (∼80, ∼240 and ∼650 nm) were achieved by using two different solvent systems and polymer concentrations. ZnO layer about 90 nm, having uniform thickness around the fiber structure, was successfully deposited onto the nylon 6,6 nanofibers. Because of the low deposition temperature utilized (200 °C), ALD process did not deform the polymeric fiber structure, and highly conformal ZnO layer with precise thickness and composition over a large scale were accomplished regardless of the differences in fiber diameters. ZnO shell layer was found to have a polycrystalline nature with hexagonal wurtzite structure. The core-shell nylon 6,6-ZnO nanofiber mats were flexible because of the polymeric core component. Photocatalytic activity of the core-shell nylon 6,6-ZnO nanofiber mats were tested by following the photocatalytic decomposition of rhodamine-B dye. The nylon 6,6-ZnO nanofiber mat, having thinner fiber diameter, has shown better photocatalytic efficiency due to higher surface area of this sample. These nylon 6,6-ZnO nanofiber mats have also shown structural stability and kept their photocatalytic activity for the second cycle test. Our findings suggest that core-shell nylon 6,6-ZnO nanofiber mat can be a very good candidate as a filter material for water purification and organic waste treatment because of their photocatalytic properties along with structural flexibility and stability.

  1. Crystallization and preliminary X-ray analysis of the major peanut allergen Ara h 1 core region

    PubMed Central

    Cabanos, Cerrone; Urabe, Hiroyuki; Masuda, Taro; Tandang-Silvas, Mary Rose; Utsumi, Shigeru; Mikami, Bunzo; Maruyama, Nobuyuki

    2010-01-01

    Peanuts contain some of the most potent food allergens known to date. Ara h 1 is one of the three major peanut allergens. As a first step towards three-dimensional structure elucidation, recombinant Ara h 1 core region was cloned, expressed in Escherichia coli and purified to homogeneity. Crystals were obtained using 0.1 M sodium citrate pH 5.6, 0.1 M NaCl, 15% PEG 400 as precipitant. The crystals diffracted to 2.25 Å resolution using synchrotron radiation and belonged to the monoclinic space group C2, with unit-cell parameters a = 156.521, b = 88.991, c = 158.971 Å, β = 107.144°. Data were collected at the BL-38B1 station of SPring-8 (Hyogo, Japan). PMID:20823529

  2. Eruptions that Drive Coronal Jets in a Solar Active Region

    NASA Technical Reports Server (NTRS)

    Sterling, Alphonse C.; Moore, Ronald L.; Falconer, David A.; Panesar, Navdeep K.; Akiyama, Sachiko; Yashiro, Seiji; Gopalswamy, Nat

    2016-01-01

    Solar coronal jets are common in both coronal holes and in active regions (e.g., Shibata et al. 1992, Shimojo et al. 1996, Cirtain et al. 2007. Savcheva et al. 2007). Recently, Sterling et al. (2015), using data from Hinode/XRT and SDO/AIA, found that coronal jets originating in polar coronal holes result from the eruption of small-scale filaments (minifilaments). The jet bright point (JBP) seen in X-rays and hotter EUV channels off to one side of the base of the jet's spire develops at the location where the minifilament erupts, consistent with the JBPs being miniature versions of typical solar flares that occur in the wake of large-scale filament eruptions. Here we consider whether active region coronal jets also result from the same minifilament-eruption mechanism, or whether they instead result from a different mechanism (e.g. Yokoyama & Shibata 1995). We present observations of an on-disk active region (NOAA AR 11513) that produced numerous jets on 2012 June 30, using data from SDO/AIA and HMI, and from GOES/SXI. We find that several of these active region jets also originate with eruptions of miniature filaments (size scale 20'') emanating from small-scale magnetic neutral lines of the region. This demonstrates that active region coronal jets are indeed frequently driven by minifilament eruptions. Other jets from the active region were also consistent with their drivers being minifilament eruptions, but we could not confirm this because the onsets of those jets were hidden from our view. This work was supported by funding from NASA/LWS, NASA/HGI, and Hinode. A full report of this study appears in Sterling et al. (2016).

  3. Interpreting the time variable RM observed in the core region of the TeV blazar Mrk 421

    NASA Astrophysics Data System (ADS)

    Lico, R.; Gómez, J. L.; Asada, K.; Fuentes, A.

    2017-08-01

    In this work, we interpret and discuss the time variable rotation measure (RM) found, for the first time over a 1-yr period, in the core region of a blazar. These results are based on a 1-yr, multifrequency (15, 24 and 43 GHz) Very Long Baseline Array (VLBA) monitoring of the TeV blazar Markarian 421 (Mrk 421). We investigate the Faraday screen properties and its location with respect to the jet emitting region. Given that the 43-GHz radio core flux density and the RM time evolution suggest a similar trend, we explore the possible connection between the RM and the accretion rate. Among the various scenarios that we explore, the jet sheath is the most promising candidate for being the main source of Faraday rotation. During the 1-yr observing period, the RM trend shows two sign reversals, which may be qualitatively interpreted within the context of the magnetic tower models. We invoke the presence of two nested helical magnetic fields in the relativistic jet with opposite helicities, whose relative contribution produce the observed RM values. The inner helical field has the poloidal component (Bp) oriented in the observer's direction and produces a positive RM, while the outer helical field, with Bp in the opposite direction, produces a negative RM. We assume that the external helical field dominates the contribution to the observed RM, while the internal helical field dominates when a jet perturbation arises during the second observing epoch. Being the intrinsic polarization angle parallel to the jet axis, a pitch angle of the helical magnetic field ϕ ≳ 70° is required. Additional scenarios are also considered to explain the observed RM sign reversals.

  4. Interplanetary planar magnetic structures associated with expanding active regions

    NASA Technical Reports Server (NTRS)

    Nakagawa, Tomoko; Uchida, Yutaka

    1995-01-01

    Planar magnetic structures are interplanetary objects whose magnetic field cannot be explained by Parker's solar wind model. They are characterized by two-dimensional structure of magnetic field that are highly variable and parallel to a plane which is inclined to the ecliptic plane. They appeared independently of interplanetary compression, solar flares, active prominences nor filament disappearances, but the sources often coincided with active regions. On the other hand, it has been discovered by the Yohkoh Soft X-ray telescope that active-region corona expand outwards at speeds of a few to a few tens of km/s near the Sun. The expansions occurred repeatedly, almost continually, even in the absence of any sizable flares. In the Yohkoh Soft X-ray images, the active-region corona seems to expand out into interplanetary space. Solar sources of interplanetary planar magnetic structures observed by Sakigake were examined by Yohkoh soft X-ray telescope. During a quiet period of the Sun from January 6 to November 11, 1993, there found 5 planar magnetic structures according to the criteria (absolute value of Bn)/(absolute value of B) less than 0.1 for planarity and (dB)/(absolute value of B) greater than 0.7 for variability of magnetic field, where Bn, dB, and the absolute value of B are field component normal to a plane, standard deviation, and average of the magnitude of the magnetic field, respectively. Sources of 4 events were on low-latitude (less than 5 degrees) active regions from which loop-like structures were expanding. The coincidence, 80%, is extremely high with respect to accidental coincidence, 7%, of Sakigake windows of solar wind observation with active regions. The last source was on loop-like features which seemed to be related with a mid-latitude (20 degrees) active region.

  5. Bimanual passive movement: functional activation and inter-regional coupling.

    PubMed

    Macaluso, Emiliano; Cherubini, Andrea; Sabatini, Umberto

    2007-01-01

    The aim of this study was to investigate intra-regional activation and inter-regional connectivity during passive movement. During fMRI, a mechanic device was used to move the subject's index and middle fingers. We assessed four movement conditions (unimanual left/right, bimanual symmetric/asymmetric), plus Rest. A conventional intra-regional analysis identified the passive stimulation network, including motor cortex, primary and secondary somatosensory cortex, plus the cerebellum. The posterior (sensory) part of the sensory-motor activation around the central sulcus showed a significant modulation according to the symmetry of the bimanual movement, with greater activation for asymmetric compared to symmetric movements. A second set of fMRI analyses assessed condition-dependent changes of coupling between sensory-motor regions around the superior central sulcus and the rest of the brain. These analyses showed a high inter-regional covariation within the entire network activated by passive movement. However, the specific experimental conditions modulated these patterns of connectivity. Highest coupling was observed during the Rest condition, and the coupling between homologous sensory-motor regions around the left and right central sulcus was higher in bimanual than unimanual conditions. These findings demonstrate that passive movement can affect the connectivity within the sensory-motor network. We conclude that implicit detection of asymmetry during bimanual movement relies on associative somatosensory region in post-central areas, and that passive stimulation reduces the functional connectivity within the passive movement network. Our findings open the possibility to combine passive movement and inter-regional connectivity as a tool to investigate the functionality of the sensory-motor system in patients with very poor mobility.

  6. Piston core record of Late Paleogene (31 Ma) to recent seafloor hydrothermal activity in the Southwest Pacific Basin

    NASA Astrophysics Data System (ADS)

    Stancin, Andrea M.; Gleason, James D.; Owen, Robert M.; Rea, David K.; Blum, Joel D.

    2008-03-01

    A large diameter piston core containing 8.35 m of metalliferous sediment has been recovered from a small abyssal valley in the remote Southwest Pacific Basin (31° 42.194'S, 143° 30° 331'W; 5082 m water depth), providing unique insight into hydrothermal activity and eolian sedimentation there since the early Oligocene. A combination of fish-teeth Sr-isotope stratigraphy and INAA geochemical data reveals an exponentially decreasing hydrothermal flux 31 Ma to the present. Although hydrothermal sedimentation related to seafloor spreading explains this trend, a complex history of late Eocene/early Oligocene ridge jumps, propagating rifts and plate tectonic reorganization of South Pacific seafloor could have also played a role. A possible hiatus in deposition, as recorded by changes in core composition just below 2 m depth, is beyond the resolution of the fish teeth Sr isotope dating method employed here; however, the timing of this interval may be coincident with extinction of the Pacific-Farallon Ridge at ˜20 Ma. A low flux eolian component accumulating at this site shows an increase relative to the hydrothermal component above 2 m depth, consistent with dust-generating continental sources far to the west (Australia/New Zealand). This is the first long-term paleoceanographic record obtained from within the South Pacific "bare zone" (Rea et al., 2006), an anomalous region where Pacific seafloor has largely escaped sediment accumulation since the Late Cretaceous.

  7. The stability and catalytic activity of W13@Pt42 core-shell structure

    PubMed Central

    Huo, Jin-Rong; Wang, Xiao-Xu; Li, Lu; Cheng, Hai-Xia; Su, Yan-Jing; Qian, Ping

    2016-01-01

    This paper reports a study of the electronic properties, structural stability and catalytic activity of the W13@Pt42 core-shell structure using the First-principles calculations. The degree of corrosion of W13@Pt42 core-shell structure is simulated in acid solutions and through molecular absorption. The absorption energy of OH for this structure is lower than that for Pt55, which inhibits the poison effect of O containing intermediate. Furthermore we present the optimal path of oxygen reduction reaction catalyzed by W13@Pt42. Corresponding to the process of O molecular decomposition, the rate-limiting step of oxygen reduction reaction catalyzed by W13@Pt42 is 0.386 eV, which is lower than that for Pt55 of 0.5 eV. In addition by alloying with W, the core-shell structure reduces the consumption of Pt and enhances the catalytic efficiency, so W13@Pt42 has a promising perspective of industrial application. PMID:27759038

  8. Felodipine β-cyclodextrin complex as an active core for time delayed chronotherapeutic treatment of hypertension.

    PubMed

    Pagar, Kunal P; Vavia, Pradeep R

    2012-11-01

    The present research work deals with the development of a time delayed chronotherapeutic formulation of felodipine (FD) aimed at rapid drug release after a desired lag time in the management of hypertension. The developed system comprises a drug core embedded within a swellable layer and coated with an insoluble, water permeable polymeric system. FD cyclodextrin complex was used as an active core while ethyl cellulose was used as an effective coating layer. Dissolution studies of the complex revealed that there was a 3-fold increase in dissolution of the complex compared to plain FD. This dissolution enhancement and rapid drug release resulted from FD amorphisation, as confirmed by XRD, DSC and SEM studies. FTIR and ¹H NMR studies confirmed the complex formation between FD and cyclodextrin based on the observed hydrogen bond interactions. FD release was adequately adjusted by using a pH independent polymer, i.e., ethyl cellulose, along with dibutyl phthalate as plasticizer. Influence of formulation variables like polymer viscosity, plasticizer concentration, super disintegrant concentration in the swellable layer and percent coating weight gain was investigated to characterize the lag time. Upon permeation of water, the core tablet swelled, resulting in the rupture of the coating layer, followed by rapid drug release. The developed formulation of FD showed a lag time of 5-7 h, which is desirable for chronotherapeutic application.

  9. The stability and catalytic activity of W13@Pt42 core-shell structure

    NASA Astrophysics Data System (ADS)

    Huo, Jin-Rong; Wang, Xiao-Xu; Li, Lu; Cheng, Hai-Xia; Su, Yan-Jing; Qian, Ping

    2016-10-01

    This paper reports a study of the electronic properties, structural stability and catalytic activity of the W13@Pt42 core-shell structure using the First-principles calculations. The degree of corrosion of W13@Pt42 core-shell structure is simulated in acid solutions and through molecular absorption. The absorption energy of OH for this structure is lower than that for Pt55, which inhibits the poison effect of O containing intermediate. Furthermore we present the optimal path of oxygen reduction reaction catalyzed by W13@Pt42. Corresponding to the process of O molecular decomposition, the rate-limiting step of oxygen reduction reaction catalyzed by W13@Pt42 is 0.386 eV, which is lower than that for Pt55 of 0.5 eV. In addition by alloying with W, the core-shell structure reduces the consumption of Pt and enhances the catalytic efficiency, so W13@Pt42 has a promising perspective of industrial application.

  10. Early Human Activity (pre-332 BC) in Alexandria, Egypt: New findings in Eastern Harbor Cores

    NASA Astrophysics Data System (ADS)

    Stanley, J.; Landau, E. A.

    2005-12-01

    Historians have long postulated that a settlement called Rhakotis was present on Egypt's Mediterranean coast in the area subsequently occupied by the city of Alexandria. To date, however, the precise position of that site has not been located in the immediate area of the city founded by Alexander the Great. Also undefined are the earliest phases of occupation that pre-date Alexandria on Pharos Island and in the harbour area. A geoarchaeological project emphasizing sediment cores in Alexandria's Eastern Harbour now provides evidence of human occupation adjacent to these settings prior to establishment of Greece's great port in 332 BC. A radiocarbon-dated stratigraphic unit, defined as Middle Sand (III) and older than the 4th century BC, includes locally produced ceramics, along with rock fragments of non-local origin, and increased content of sand-sized heavy mineral and organic matter. Together, these date at least to Egypt's Late Dynastic Period (712-332 BC). Moreover, the geographic positions of core sites containing these markers indicate that early habitation occurred both at Pharos Island and on the mainland where the future Alexandria would be built. New findings in cores recovered in this marine environment are adding to knowledge of both natural processes and effects of human activity in early Alexandria.

  11. The stability and catalytic activity of W13@Pt42 core-shell structure.

    PubMed

    Huo, Jin-Rong; Wang, Xiao-Xu; Li, Lu; Cheng, Hai-Xia; Su, Yan-Jing; Qian, Ping

    2016-10-19

    This paper reports a study of the electronic properties, structural stability and catalytic activity of the W13@Pt42 core-shell structure using the First-principles calculations. The degree of corrosion of W13@Pt42 core-shell structure is simulated in acid solutions and through molecular absorption. The absorption energy of OH for this structure is lower than that for Pt55, which inhibits the poison effect of O containing intermediate. Furthermore we present the optimal path of oxygen reduction reaction catalyzed by W13@Pt42. Corresponding to the process of O molecular decomposition, the rate-limiting step of oxygen reduction reaction catalyzed by W13@Pt42 is 0.386 eV, which is lower than that for Pt55 of 0.5 eV. In addition by alloying with W, the core-shell structure reduces the consumption of Pt and enhances the catalytic efficiency, so W13@Pt42 has a promising perspective of industrial application.

  12. TARPs: Tracked Active Region Patches from SoHO/MDI

    NASA Astrophysics Data System (ADS)

    Turmon, M.; Hoeksema, J. T.; Bobra, M.

    2013-12-01

    We describe progress toward creating a retrospective MDI data product consisting of tracked magnetic features on the scale of solar active regions, abbreviated TARPs (Tracked Active Region Patches). The TARPs are being developed as a backward-looking extension (covering approximately 3500 regions spanning 1996-2010) to the HARP (HMI Active Region Patch) data product that has already been released for HMI (2010-present). Like the HARPs, the MDI TARP data set is designed to be a catalog of active regions (ARs), indexed by a region ID number, analogous to a NOAA AR number, and time. TARPs from MDI are computed based on the 96-minute synoptic magnetograms and pseudo-continuum intensitygrams. As with the related HARP data product, the approximate threshold for significance is 100G. Use of both image types together allows faculae and sunspots to be separated out as sub-classes of activity, in addition to identifying the overall active region that the faculae/sunspots are part of. After being identified in single images, the magnetically-active patches are grouped and tracked from image to image. Merges among growing active regions, as well as faint active regions hovering at the threshold of detection, are handled automatically. Regions are tracked from their inception until they decay within view, or transit off the visible disk. The final data product is indexed by a nominal AR number and time. For each active region and for each time, a bitmap image is stored containing the precise outline of the active region. Additionaly, metadata such as areas and integrated fluxes are stored for each AR and for each time. Because there is a calibration between the HMI and MDI magnetograms (Liu, Hoeksema et al. 2012), it is straightforward to use the same classification and tracking rules for the HARPs (from HMI) and the MDI TARPs. We anticipate that this will allow a consistent catalog spanning both instruments. We envision several uses for the TARP data product, which will be

  13. Mild Clinical Features and Histopathologically Atypical Cores in Two Korean Families with Central Core Disease Harboring RYR1 Mutations at the C-Terminal Region

    PubMed Central

    Jung, Na-Yeon; Park, Yeong-Eun; Shin, Jin-Hong; Lee, Chang Hun; Jung, Dae-Soo

    2015-01-01

    Background Central core disease (CCD) is a congenital myopathy characterized by distinctive cores in muscle fibers. Mutations in the gene encoding ryanodine receptor 1 (RYR1) have been identified in most CCD patients. Case Report Two unrelated patients presented with slowly progressive or nonprogressive proximal muscle weakness since childhood. Their family history revealed some members with the same clinical problem. Histological analysis of muscle biopsy samples revealed numerous peripheral cores in the muscle fibers. RYR1 sequence analysis disclosed a novel mutation in exon 101 (c.14590T>C) and confirmed a previously reported mutation in exon 102 (c.14678G>A). Conclusions We report herein two families with CCD in whom missense mutations at the C-terminal of RYR1 were identified. Although it has been accepted that such mutations are usually associated with a severe clinical phenotype and clearly demarcated central cores, our patients exhibited a mild clinical phenotype without facial muscle involvement and skeletal deformities, and atypical cores in their muscle biopsy specimens. PMID:25628744

  14. Mild Clinical Features and Histopathologically Atypical Cores in Two Korean Families with Central Core Disease Harboring RYR1 Mutations at the C-Terminal Region.

    PubMed

    Jung, Na-Yeon; Park, Yeong-Eun; Shin, Jin-Hong; Lee, Chang Hun; Jung, Dae-Soo; Kim, Dae-Seong

    2015-01-01

    Central core disease (CCD) is a congenital myopathy characterized by distinctive cores in muscle fibers. Mutations in the gene encoding ryanodine receptor 1 (RYR1) have been identified in most CCD patients. Two unrelated patients presented with slowly progressive or nonprogressive proximal muscle weakness since childhood. Their family history revealed some members with the same clinical problem. Histological analysis of muscle biopsy samples revealed numerous peripheral cores in the muscle fibers. RYR1 sequence analysis disclosed a novel mutation in exon 101 (c.14590T>C) and confirmed a previously reported mutation in exon 102 (c.14678G>A). We report herein two families with CCD in whom missense mutations at the C-terminal of RYR1 were identified. Although it has been accepted that such mutations are usually associated with a severe clinical phenotype and clearly demarcated central cores, our patients exhibited a mild clinical phenotype without facial muscle involvement and skeletal deformities, and atypical cores in their muscle biopsy specimens.

  15. Comparison of denitrification activity measurements in groundwater using cores and natural-gradient tracer tests

    USGS Publications Warehouse

    Smith, R.L.; Garabedian, S.P.; Brooks, M.H.

    1996-01-01

    The transport of many solutes in groundwater is dependent upon the relative rates of physical flow and microbial metabolism. Quantifying rates of microbial processes under subsurface conditions is difficult and is most commonly approximated using laboratory studies with aquifer materials. In this study, we measured in situ rates of denitrification in a nitrate- contaminated aquifer using small-scale, natural-gradient tracer tests and compared the results with rates obtained from laboratory incubations with aquifer core material. Activity was measured using the acetylene block technique. For the tracer tests, co-injection of acetylene and bromide into the aquifer produced a 30 ??M increase in nitrous oxide after 10 m of transport (23-30 days). An advection-dispersion transport model was modified to include an acetylene-dependent nitrous oxide production term and used to simulate the tracer breakthrough curves. The model required a 4-day lag period and a relatively low sensitivity to acetylene to match the narrow nitrous oxide breakthrough curves. Estimates of in situ denitrification rates were 0.60 and 1.51 nmol of N2O produced cm-3 aquifer day-1 for two successive tests. Aquifer core material collected from the tracer test site and incubated as mixed slurries in flasks and as intact cores yielded rates that were 1.2-26 times higher than the tracer test rate estimates. Results with the coring-dependent techniques were variable and subject to the small- scale heterogeneity within the aquifer, while the tracer tests integrated the heterogeneity along a flow path, giving a rate estimate that is more applicable to transport at the scale of the aquifer.

  16. Chromospheric Magnetic Field of Exploding Solar Active Regions

    NASA Astrophysics Data System (ADS)

    Choudhary, Debi P.

    2013-07-01

    How changes in the three-dimensional magnetic field of solar active region are related to Coronal Mass Ejections (CME) is an important question for contemporary solar physics. Complex active regions are the predominant source of powerful high-speed CMEs, which can result in strong geomagnetic storms. In this paper we present the properties of chromospheric magnetic field of active regions that produced solar flares and CMEs using observations of the Synoptic Optical Long-term Investigations of the Sun (SOLIS) facility operated by the National Solar Observatory. Currently, the SOLIS Vector Spectromagnetograph (VSM) is the only instrument that is capable of obtaining full Stokes profiles in both the photospheric Fe I λ630.2 nm and chromospheric Ca II λ854.2 nm lines on a daily basis. VSM also has the capability of making rapid scans covering an area sufficiently large to contain an active region. We shall present the Stokes profile characteristics of photospheric and chromospheric lines of few CME source regions.

  17. Chromospheric Magnetic Field of Exploding Solar Active Regions

    NASA Astrophysics Data System (ADS)

    Choudhary, Debi Prasad

    How changes in the three-dimensional magnetic field of solar active region are related to Coronal Mass Ejections (CME) is an important question for contemporary solar physics. Complex active regions are the predominant source of powerful high-speed CMEs, which can result in strong geomagnetic storms. In this paper we present the properties of chromospheric magnetic field of active regions that produced solar flares and CMEs using observations of the Synoptic Optical Long-term Investigations of the Sun (SOLIS) facility operated by the National Solar Observatory. Currently, the SOLIS Vector Spectromagnetograph (VSM) is the only instrument that is capable of obtaining full Stokes profiles in both the photospheric Fe I 630.2 nm and chromospheric Ca II 854.2 nm lines on a daily basis. VSM also has the capability of making rapid scans covering an area sufficiently large to contain an active region. We shall present the Stokes profile characteristics of photospheric and chromospheric lines of few CME source regions.

  18. Functional dissection of the mouse tyrosinase locus control region identifies a new putative boundary activity

    PubMed Central

    Giraldo, Patricia; Martínez, Antonio; Regales, Lucía; Lavado, Alfonso; García-Díaz, Angel; Alonso, Ángel; Busturia, Ana; Montoliu, Lluís

    2003-01-01

    Locus control regions (LCRs) are complex high-order chromatin structures harbouring several regulatory elements, including enhancers and boundaries. We have analysed the mouse tyrosinase LCR functions, in vitro, in cell lines and, in vivo, in transgenic mice and flies. The LCR-core (2.1 kb), located at –15 kb and carrying a previously described tissue-specific DNase I hypersensitive site, operates as a transcriptional enhancer that efficiently transactivates heterologous promoters in a cell-specific orientation-independent manner. Furthermore, we have investigated the boundary activity of these sequences in transgenic animals and cells. In mice, the LCR fragment (3.7 kb) rescued a weakly expressed reference construct that displays position effects. In Drosophila, the LCR fragment and its core insulated the expression of a white minigene reporter construct from chromosomal position effects. In cells, sequences located 5′ from the LCR-core displayed putative boundary activities. We have obtained genomic sequences surrounding the LCR fragment and found a LINE1 repeated element at 5′. In B16 melanoma and L929 fibroblast mouse cells, this element was found heavily methylated, supporting the existence of putative boundary elements that could prevent the spreading of condensed chromatin from the LINE1 sequences into the LCR fragment, experimentally shown to be in an open chromatin structure. PMID:14576318

  19. Functional dissection of the mouse tyrosinase locus control region identifies a new putative boundary activity.

    PubMed

    Giraldo, Patricia; Martínez, Antonio; Regales, Lucía; Lavado, Alfonso; García-Díaz, Angel; Alonso, Angel; Busturia, Ana; Montoliu, Lluís

    2003-11-01

    Locus control regions (LCRs) are complex high-order chromatin structures harbouring several regulatory elements, including enhancers and boundaries. We have analysed the mouse tyrosinase LCR functions, in vitro, in cell lines and, in vivo, in transgenic mice and flies. The LCR-core (2.1 kb), located at -15 kb and carrying a previously described tissue-specific DNase I hypersensitive site, operates as a transcriptional enhancer that efficiently transactivates heterologous promoters in a cell-specific orientation-independent manner. Furthermore, we have investigated the boundary activity of these sequences in transgenic animals and cells. In mice, the LCR fragment (3.7 kb) rescued a weakly expressed reference construct that displays position effects. In Drosophila, the LCR fragment and its core insulated the expression of a white minigene reporter construct from chromosomal position effects. In cells, sequences located 5' from the LCR-core displayed putative boundary activities. We have obtained genomic sequences surrounding the LCR fragment and found a LINE1 repeated element at 5'. In B16 melanoma and L929 fibroblast mouse cells, this element was found heavily methylated, supporting the existence of putative boundary elements that could prevent the spreading of condensed chromatin from the LINE1 sequences into the LCR fragment, experimentally shown to be in an open chromatin structure.

  20. Palladium–platinum core-shell icosahedra with substantially enhanced activity and durability towards oxygen reduction

    PubMed Central

    Wang, Xue; Choi, Sang-Il; Roling, Luke T.; Luo, Ming; Ma, Cheng; Zhang, Lei; Chi, Miaofang; Liu, Jingyue; Xie, Zhaoxiong; Herron, Jeffrey A.; Mavrikakis, Manos; Xia, Younan

    2015-01-01

    Conformal deposition of platinum as ultrathin shells on facet-controlled palladium nanocrystals offers a great opportunity to enhance the catalytic performance while reducing its loading. Here we report such a system based on palladium icosahedra. Owing to lateral confinement imposed by twin boundaries and thus vertical relaxation only, the platinum overlayers evolve into a corrugated structure under compressive strain. For the core-shell nanocrystals with an average of 2.7 platinum overlayers, their specific and platinum mass activities towards oxygen reduction are enhanced by eight- and sevenfold, respectively, relative to a commercial catalyst. Density functional theory calculations indicate that the enhancement can be attributed to the weakened binding of hydroxyl to the compressed platinum surface supported on palladium. After 10,000 testing cycles, the mass activity of the core-shell nanocrystals is still four times higher than the commercial catalyst. These results demonstrate an effective approach to the development of electrocatalysts with greatly enhanced activity and durability. PMID:26133469

  1. Palladium–platinum core-shell icosahedra with substantially enhanced activity and durability towards oxygen reduction

    DOE PAGES

    Wang, Xue; Choi, Sang-Il; Roling, Luke T.; ...

    2015-07-02

    Conformal deposition of platinum as ultrathin shells on facet-controlled palladium nanocrystals offers a great opportunity to enhance the catalytic performance while reducing its loading. Here we report such a system based on palladium icosahedra. Owing to lateral confinement imposed by twin boundaries and thus vertical relaxation only, the platinum overlayers evolve into a corrugated structure under compressive strain. For the core-shell nanocrystals with an average of 2.7 platinum overlayers, their specific and platinum mass activities towards oxygen reduction are enhanced by eight- and sevenfold, respectively, relative to a commercial catalyst. Density functional theory calculations indicate that the enhancement can bemore » attributed to the weakened binding of hydroxyl to the compressed platinum surface supported on palladium. After 10,000 testing cycles, the mass activity of the core-shell nanocrystals is still four times higher than the commercial catalyst. Ultimately, these results demonstrate an effective approach to the development of electrocatalysts with greatly enhanced activity and durability.« less

  2. Increased energy/activity, not mood changes, is the core feature of mania.

    PubMed

    Cheniaux, Elie; Filgueiras, Alberto; Silva, Rafael de Assis da; Silveira, Luciana Angélica Silva; Nunes, Ana Letícia Santos; Landeira-Fernandez, J

    2014-01-01

    In the Diagnostic and Statistical Manual of Mental Disorders, 5th edition, the occurrence of increased energy/activity and elation of mood or irritability became necessary symptoms for the diagnosis of an episode of mania or hypomania. To evaluate whether increases in energy/activity or mood changes represent the core feature of the manic syndrome. The symptomatology of 117 hospitalized patients with bipolar mania was evaluated using the Schedule for Affective Disorders and Schizophrenia-Changed version (SADS-C). Based on six items of the SADS-S related to mania, a Confirmatory Factor Analysis (CFA) was performed. An Item Response Theory (IRT) analysis was used to identify how much each symptom informs about the different levels of severity of the syndrome. According to the CFA, the item "increased energy" was the symptom with the highest factorial loadings, which was confirmed by the IRT analysis. Thus, increased energy was the alteration most correlated with the total severity of manic symptoms. Additionally, the analysis of the Item Information Function revealed that increased energy was correlated with the larger amplitude of severity levels compared with the other symptoms of mania. Only six manic symptoms were considered. The sample might not be representative because the patients were evaluated while presenting peak symptom severity. Increased energy/activity is a more important symptom for a diagnosis of mania than mood changes and represents the core feature of this syndrome. © 2013 Elsevier B.V. All rights reserved.

  3. Antitumor Activity of Alloy and Core-Shell-Type Bimetallic AgAu Nanoparticles.

    PubMed

    Shmarakov, Igor; Mukha, Iuliia; Vityuk, Nadiia; Borschovetska, Vira; Zhyshchynska, Nelya; Grodzyuk, Galyna; Eremenko, Anna

    2017-12-01

    Nanoparticles (NPs) of noble metals, namely gold and silver, remain promising anticancer agents capable of enhancing current surgery- and chemotherapeutic-based approaches in cancer treatment. Bimetallic AgAu composition can be used as a more effective agent due to the synergetic effect. Among the physicochemical parameters affecting gold and silver nanoparticle biological activity, a primary concern relates to their size, shape, composition, charge, etc. However, the impact of metal components/composition as well as metal topological distribution within NPs is incompletely characterized and remains to be further elucidated and clarified. In the present work, we tested a series of colloidal solutions of AgAu NPs of alloy and core-shell type for an antitumor activity depending on metal molar ratios (Ag:Au = 1:1; 1:3; 3:1) and topological distribution of gold and silver within NPs (AucoreAgshell; AgcoreAushell). The efficacy at which an administration of the gold and silver NPs inhibits mouse Lewis lung carcinoma (LLC) growth in vivo was compared. The data suggest that in vivo antitumor activity of the studied NPs strongly depends on gold and silver interaction arising from their ordered topological distribution. NPs with Ag core covered by Au shell were the most effective among the NPs tested towards LLC tumor growth and metastasizing inhibition. Our data show that among the NPs tested in this study, AgcoreAushell NPs may serve as a suitable anticancerous prototype.

  4. Antitumor Activity of Alloy and Core-Shell-Type Bimetallic AgAu Nanoparticles

    NASA Astrophysics Data System (ADS)

    Shmarakov, Igor; Mukha, Iuliia; Vityuk, Nadiia; Borschovetska, Vira; Zhyshchynska, Nelya; Grodzyuk, Galyna; Eremenko, Anna

    2017-05-01

    Nanoparticles (NPs) of noble metals, namely gold and silver, remain promising anticancer agents capable of enhancing current surgery- and chemotherapeutic-based approaches in cancer treatment. Bimetallic AgAu composition can be used as a more effective agent due to the synergetic effect. Among the physicochemical parameters affecting gold and silver nanoparticle biological activity, a primary concern relates to their size, shape, composition, charge, etc. However, the impact of metal components/composition as well as metal topological distribution within NPs is incompletely characterized and remains to be further elucidated and clarified. In the present work, we tested a series of colloidal solutions of AgAu NPs of alloy and core-shell type for an antitumor activity depending on metal molar ratios (Ag:Au = 1:1; 1:3; 3:1) and topological distribution of gold and silver within NPs (AucoreAgshell; AgcoreAushell). The efficacy at which an administration of the gold and silver NPs inhibits mouse Lewis lung carcinoma (LLC) growth in vivo was compared. The data suggest that in vivo antitumor activity of the studied NPs strongly depends on gold and silver interaction arising from their ordered topological distribution. NPs with Ag core covered by Au shell were the most effective among the NPs tested towards LLC tumor growth and metastasizing inhibition. Our data show that among the NPs tested in this study, AgcoreAushell NPs may serve as a suitable anticancerous prototype.

  5. Systemically administered oxytocin decreases methamphetamine activation of the subthalamic nucleus and accumbens core and stimulates oxytocinergic neurons in the hypothalamus.

    PubMed

    Carson, Dean S; Hunt, Glenn E; Guastella, Adam J; Barber, Lachlan; Cornish, Jennifer L; Arnold, Jonathon C; Boucher, Aurelie A; McGregor, Iain S

    2010-10-01

    Recent preclinical evidence indicates that the neuropeptide oxytocin may have potential in the treatment of drug dependence and drug withdrawal. Oxytocin reduces methamphetamine self-administration, conditioned place preference and hyperactivity in rodents. However, it is unclear how oxytocin acts in the brain to produce such effects. The present study examined how patterns of neural activation produced by methamphetamine were modified by co-administered oxytocin. Male Sprague-Dawley rats were pretreated with either 2 mg/kg oxytocin (IP) or saline and then injected with either 2 mg/kg methamphetamine (IP) or saline. After injection, locomotor activity was measured for 80 minutes prior to perfusion. As in previous studies, co-administered oxytocin significantly reduced methamphetamine-induced behaviors. Strikingly, oxytocin significantly reduced methamphetamine-induced Fos expression in two regions of the basal ganglia: the subthalamic nucleus and the nucleus accumbens core. The subthalamic nucleus is of particular interest given emerging evidence for this structure in compulsive, addiction-relevant behaviors. When administered alone, oxytocin increased Fos expression in several regions, most notably in the oxytocin-synthesizing neurons of the supraoptic nucleus and paraventricular nucleus of the hypothalamus. This provides new evidence for central actions of peripheral oxytocin and suggests a self-stimulation effect of exogenous oxytocin on its own hypothalamic circuitry. Overall, these results give further insight into the way in which oxytocin might moderate compulsive behaviors and demonstrate the capacity of peripherally administered oxytocin to induce widespread central effects.

  6. Risperidone alters food intake, core body temperature, and locomotor activity in mice.

    PubMed

    Cope, Mark B; Li, Xingsheng; Jumbo-Lucioni, Patricia; DiCostanzo, Catherine A; Jamison, Wendi G; Kesterson, Robert A; Allison, David B; Nagy, Tim R

    2009-03-02

    Risperidone induces significant weight gain in female mice; however, the underlying mechanisms related to this effect are unknown. We investigated the effects of risperidone on locomotor activity, core body temperature, and uncoupling protein (UCP) and hypothalamic orexin mRNA expression. Female C57BL/6J mice were acclimated to individual housing and randomly assigned to either risperidone (4 mg/kg BW day) or placebo (PLA). Activity and body temperature were measured over 48-hour periods twice a week for 3 weeks. Food intake and body weights were measured weekly. UCP1 (BAT), UCP3 (gastrocnemius), and orexin (hypothalamus) mRNA expressions were measured using RT-PCR. Risperidone-treated mice consumed more food (p=0.050) and gained more weight (p=0.0001) than PLA-treated mice after 3 weeks. During the initial 2 days of treatment, there was an acute effect of treatment on activity (p=0.046), but not body temperature (p=0.290). During 3 weeks of treatment, average core body temperatures were higher in risperidone-treated mice compared to controls during the light phase (p=0.0001), and tended to be higher during the dark phase (p=0.057). Risperidone-treated mice exhibited lower activity levels than controls during the dark phase (p=0.006); there were no differences in activity during the light phase (p=0.47). UCP1 (p<0.01) and UCP3 (p<0.05) mRNA expressions were greater in risperidone-treated mice compared to controls, whereas, orexin mRNA expression was lower in risperidone-treated mice (p<0.01). These results suggest that risperidone-induced weight gain in mice is a consequence of increased energy intake and reduced activity, while the elevation in body temperature may be a result of thermogenic effect of food intake and elevated UCP1, UCP3, and a reduced hypothalamic orexin expression.

  7. A core of three amino acids at the carboxyl-terminal region of glutamine synthetase defines its regulation in cyanobacteria.

    PubMed

    Saelices, Lorena; Robles-Rengel, Rocío; Florencio, Francisco J; Muro-Pastor, M Isabel

    2015-05-01

    Glutamine synthetase (GS) type I is a key enzyme in nitrogen metabolism, and its activity is finely controlled by cellular carbon/nitrogen balance. In cyanobacteria, a reversible process that involves protein-protein interaction with two proteins, the inactivating factors IF7 and IF17, regulates GS. Previously, we showed that three arginine residues of IFs are critical for binding and inhibition of GS. In this work, taking advantage of the specificity of GS/IFs interaction in the model cyanobacteria Synechocystis sp. PCC 6803 and Anabaena sp. PCC 7120, we have constructed a different chimeric GSs from these two cyanobacteria. Analysis of these proteins, together with a site-directed mutagenesis approach, indicates that a core of three residues (E419, N456 and R459) is essential for the inactivation process. The three residues belong to the last 56 amino acids of the C-terminus of Synechocystis GS. A protein-protein docking modeling of Synechocystis GS in complex with IF7 supports the role of the identified core for GS/IF interaction.

  8. Photospheric Magnetic Evolution in the WHI Active Regions

    NASA Technical Reports Server (NTRS)

    Welsch, B. T.; McTiernan, J. M.; Christe, S.

    2012-01-01

    Sequences of line-of-sight (LOS) magnetograms recorded by the Michelson Doppler Imager are used to quantitatively characterize photospheric magnetic structure and evolution in three active regions that rotated across the Sun s disk during the Whole Heliosphere Interval (WHI), in an attempt to relate the photospheric magnetic properties of these active regions to flares and coronal mass ejections (CMEs). Several approaches are used in our analysis, on scales ranging from whole active regions, to magnetic features, to supergranular scales, and, finally, to individual pixels. We calculated several parameterizations of magnetic structure and evolution that have previously been associated with flare and CME activity, including total unsigned magnetic flux, magnetic flux near polarity-inversion lines, amount of canceled flux, the "proxy Poynting flux," and helicity flux. To catalog flare events, we used flare lists derived from both GOES and RHESSI observations. By most such measures, AR 10988 should have been the most flare- and CME-productive active region, and AR 10989 the least. Observations, however, were not consistent with this expectation: ARs 10988 and 10989 produced similar numbers of flares, and AR 10989 also produced a few CMEs. These results highlight present limitations of statistics-based flare and CME forecasting tools that rely upon line-of-sight photospheric magnetic data alone.

  9. Elemental carbon and polycyclic aromatic compounds in a 150-year sediment core from Lake Qinghai, Tibetan Plateau, China: influence of regional and local sources and transport pathways.

    PubMed

    Han, Y M; Wei, C; Bandowe, B A M; Wilcke, W; Cao, J J; Xu, B Q; Gao, S P; Tie, X X; Li, G H; Jin, Z D; An, Z S

    2015-04-07

    Elemental carbon (EC) and polycyclic aromatic compounds (PACs) are potential proxies for the reconstruction of change in human activities and the origin of air masses in historic times. In this study, the historic deposition of char and soot (the two subtypes of EC) and PACs in a 150-year sediment core from different topographic subbasins of Lake Qinghai on the Qinghai Tibetan Plateau (QTP) were reconstructed. The objective was to explore how the variations in the concentrations of EC and PACs, in the ratios of char to soot and of oxygenated polycyclic aromatic hydrocarbons (OPAHs) to parent PAHs, and in the composition of the PAC mixtures reflect historical changes in climate and human activity and the origin of air masses arriving at the QTP. The deposition fluxes of soot in the different subbasins were similar, averaging 0.18 (range of 0.15-0.25) and 0.16 (0.13-0.23) g m(-2) year(-1), respectively, but they varied for char (averaging 0.11 and 0.22 g m(-2) year(-1), respectively), suggesting ubiquitous atmospheric deposition of soot and local river inputs of char. The different vertical distributions of the char/soot ratios in the different subbasins can be interpreted in terms of the different transport mechanisms of char and soot. An abrupt increase in soot concentrations since 1980 coincides with results from the QTP ice cores that were interpreted to be indicative of soot transport from South Asia. Similar concentration patterns of PAHs with soot and 9,10-anthraquinone/anthracene (9,10-AQ/ANT) ratios all >2.0 suggest regional PAC sources. Increasing PAH/soot ratios and decreasing 9,10-AQ/ANT ratios since the beginning of the 1970s indicate increasing local emissions. The historical trends of these diagnostic ratios indicate an increase in the fossil-fuel contribution since the beginning of the 1970s. The increase of perylene concentrations with increasing core depth and the ratio of perylene to its penta-aromatic isomers indicate that perylene originates

  10. ON THE ACTIVE REGION BRIGHT GRAINS OBSERVED IN THE TRANSITION REGION IMAGING CHANNELS OF IRIS

    SciTech Connect

    Skogsrud, H.; Voort, L. Rouppe van der; Pontieu, B. De

    2016-02-01

    The Interface Region Imaging Spectrograph (IRIS) provides spectroscopy and narrow band slit-jaw (SJI) imaging of the solar chromosphere and transition region at unprecedented spatial and temporal resolutions. Combined with high-resolution context spectral imaging of the photosphere and chromosphere as provided by the Swedish 1 m Solar Telescope (SST), we can now effectively trace dynamic phenomena through large parts of the solar atmosphere in both space and time. IRIS SJI 1400 images from active regions, which primarily sample the transition region with the Si iv 1394 and 1403 Å lines, reveal ubiquitous bright “grains” which are short-lived (two to five minute) bright roundish small patches of sizes 0.″5–1.″7 that generally move limbward with velocities up to about 30 km s{sup −1}. In this paper, we show that many bright grains are the result of chromospheric shocks impacting the transition region. These shocks are associated with dynamic fibrils (DFs), most commonly observed in Hα. We find that the grains show the strongest emission in the ascending phase of the DF, that the emission is strongest toward the top of the DF, and that the grains correspond to a blueshift and broadening of the Si iv lines. We note that the SJI 1400 grains can also be observed in the SJI 1330 channel which is dominated by C ii lines. Our observations show that a significant part of the active region transition region dynamics is driven from the chromosphere below rather than from coronal activity above. We conclude that the shocks that drive DFs also play an important role in the heating of the upper chromosphere and lower transition region.

  11. On the Active Region Bright Grains Observed in the Transition Region Imaging Channels of IRIS

    NASA Astrophysics Data System (ADS)

    Skogsrud, H.; Rouppe van der Voort, L.; De Pontieu, B.

    2016-02-01

    The Interface Region Imaging Spectrograph (IRIS) provides spectroscopy and narrow band slit-jaw (SJI) imaging of the solar chromosphere and transition region at unprecedented spatial and temporal resolutions. Combined with high-resolution context spectral imaging of the photosphere and chromosphere as provided by the Swedish 1 m Solar Telescope (SST), we can now effectively trace dynamic phenomena through large parts of the solar atmosphere in both space and time. IRIS SJI 1400 images from active regions, which primarily sample the transition region with the Si iv 1394 and 1403 Å lines, reveal ubiquitous bright “grains” which are short-lived (two to five minute) bright roundish small patches of sizes 0.″5-1.″7 that generally move limbward with velocities up to about 30 km s-1. In this paper, we show that many bright grains are the result of chromospheric shocks impacting the transition region. These shocks are associated with dynamic fibrils (DFs), most commonly observed in Hα. We find that the grains show the strongest emission in the ascending phase of the DF, that the emission is strongest toward the top of the DF, and that the grains correspond to a blueshift and broadening of the Si iv lines. We note that the SJI 1400 grains can also be observed in the SJI 1330 channel which is dominated by C ii lines. Our observations show that a significant part of the active region transition region dynamics is driven from the chromosphere below rather than from coronal activity above. We conclude that the shocks that drive DFs also play an important role in the heating of the upper chromosphere and lower transition region.

  12. Madagascar corals track sea surface temperature variability in the Agulhas Current core region over the past 334 years.

    PubMed

    Zinke, J; Loveday, B R; Reason, C J C; Dullo, W-C; Kroon, D

    2014-03-18

    The Agulhas Current (AC) is the strongest western boundary current in the Southern Hemisphere and is key for weather and climate patterns, both regionally and globally. Its heat transfer into both the midlatitude South Indian Ocean and South Atlantic is of global significance. A new composite coral record (Ifaty and Tulear massive Porites corals), is linked to historical AC sea surface temperature (SST) instrumental data, showing robust correlations. The composite coral SST data start in 1660 and comprise 200 years more than the AC instrumental record. Numerical modelling exhibits that this new coral derived SST record is representative for the wider core region of the AC. AC SSTs variabilities show distinct cooling through the Little Ice Age and warming during the late 18(th), 19th and 20th century, with significant decadal variability superimposed. Furthermore, the AC SSTs are teleconnected with the broad southern Indian and Atlantic Oceans, showing that the AC system is pivotal for inter-ocean heat exchange south of Africa.

  13. Madagascar corals track sea surface temperature variability in the Agulhas Current core region over the past 334 years

    PubMed Central

    Zinke, J.; Loveday, B. R.; Reason, C. J. C.; Dullo, W.-C.; Kroon, D.

    2014-01-01

    The Agulhas Current (AC) is the strongest western boundary current in the Southern Hemisphere and is key for weather and climate patterns, both regionally and globally. Its heat transfer into both the midlatitude South Indian Ocean and South Atlantic is of global significance. A new composite coral record (Ifaty and Tulear massive Porites corals), is linked to historical AC sea surface temperature (SST) instrumental data, showing robust correlations. The composite coral SST data start in 1660 and comprise 200 years more than the AC instrumental record. Numerical modelling exhibits that this new coral derived SST record is representative for the wider core region of the AC. AC SSTs variabilities show distinct cooling through the Little Ice Age and warming during the late 18th, 19th and 20th century, with significant decadal variability superimposed. Furthermore, the AC SSTs ar