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Sample records for adaptive optics real-time

  1. Durham adaptive optics real-time controller.

    PubMed

    Basden, Alastair; Geng, Deli; Myers, Richard; Younger, Eddy

    2010-11-10

    The Durham adaptive optics (AO) real-time controller was initially a proof of concept design for a generic AO control system. It has since been developed into a modern and powerful central-processing-unit-based real-time control system, capable of using hardware acceleration (including field programmable gate arrays and graphical processing units), based primarily around commercial off-the-shelf hardware. It is powerful enough to be used as the real-time controller for all currently planned 8 m class telescope AO systems. Here we give details of this controller and the concepts behind it, and report on performance, including latency and jitter, which is less than 10 μs for small AO systems. PMID:21068868

  2. Low-cost high performance adaptive optics real-time controller in free space optical communication system

    NASA Astrophysics Data System (ADS)

    Chen, Shanqiu; Liu, Chao; Zhao, Enyi; Xian, Hao; Xu, Bing; Ye, Yutang

    2014-11-01

    This paper proposed a low-cost and high performance adaptive optics real-time controller in free space optical communication system. Real-time controller is constructed with a 4-core CPU with Linux operation system patched with Real-Time Application Interface (RTAI) and a frame-grabber, and the whole cost is below $6000. Multi-core parallel processing scheme and SSE instruction optimization for reconstruction process result in about 5 speedup, and overall processing time for this 137-element adaptive optic system can reach below 100 us and with latency about 50 us by utilizing streamlined processing scheme, which meet the requirement of processing at frequency over 1709 Hz. Real-time data storage system designed by circle buffer make this system to store consecutive image frames and provide an approach to analysis the image data and intermediate data such as slope information.

  3. DRAGON, the Durham real-time, tomographic adaptive optics test bench: progress and results

    NASA Astrophysics Data System (ADS)

    Reeves, Andrew P.; Myers, Richard M.; Morris, Timothy J.; Basden, Alastair G.; Bharmal, Nazim A.; Rolt, Stephen; Bramall, David G.; Dipper, Nigel A.; Younger, Edward J.

    2014-08-01

    DRAGON is a real-time, tomographic Adaptive Optics test bench currently under development at Durham University. Optical and mechanical design work for DRAGON is now complete, and the system is close to becoming fully operational. DRAGON emulates current 4.2 m and 8 m telescopes, and can also be used to investigate ELT scale issues. The full system features 4 Laser Guide Star (LGS) Wavefront Sensors (WFS), 3 Natural Guide Star (NGS) WFSs and one Truth Sensor, all of which are 31 × 31 sub-aperture Shack-Hartmann WFS. Two Deformable Mirrors (DMs), a Boston MEMS Kilo DM and a Xinetics 97 actuator DM, correct for turbulence induced aberrations and these can be configured to be either open or closed loop of the WFS. A novel method of LGS emulation is implemented which includes the effects of uplink turbulence and elongation in real-time. The atmosphere is emulated by 4 rotating phase screens which can be translated in real-time to replicate altitude evolution of turbulent layers. DRAGON will be used to extensively study tomographic AO algorithms, such as those required for Multi-Object AO. As DRAGON has been designed to be compatible with CANARY, the MOAO demonstrator, results can be compared to those from the CANARY MOAO demonstrator on the 4.2m William Herschel Telescope. We present here an overview of the current status of DRAGON and some early results, including investigations into the validity of the LGS emulation method.

  4. Development of a scalable generic platform for adaptive optics real time control

    NASA Astrophysics Data System (ADS)

    Surendran, Avinash; Burse, Mahesh P.; Ramaprakash, A. N.; Parihar, Padmakar

    2015-06-01

    The main objective of the present project is to explore the viability of an adaptive optics control system based exclusively on Field Programmable Gate Arrays (FPGAs), making strong use of their parallel processing capability. In an Adaptive Optics (AO) system, the generation of the Deformable Mirror (DM) control voltages from the Wavefront Sensor (WFS) measurements is usually through the multiplication of the wavefront slopes with a predetermined reconstructor matrix. The ability to access several hundred hard multipliers and memories concurrently in an FPGA allows performance far beyond that of a modern CPU or GPU for tasks with a well-defined structure such as Adaptive Optics control. The target of the current project is to generate a signal for a real time wavefront correction, from the signals coming from a Wavefront Sensor, wherein the system would be flexible to accommodate all the current Wavefront Sensing techniques and also the different methods which are used for wavefront compensation. The system should also accommodate for different data transmission protocols (like Ethernet, USB, IEEE 1394 etc.) for transmitting data to and from the FPGA device, thus providing a more flexible platform for Adaptive Optics control. Preliminary simulation results for the formulation of the platform, and a design of a fully scalable slope computer is presented.

  5. Real-time blind deconvolution of retinal images in adaptive optics scanning laser ophthalmoscopy

    NASA Astrophysics Data System (ADS)

    Li, Hao; Lu, Jing; Shi, Guohua; Zhang, Yudong

    2011-06-01

    With the use of adaptive optics (AO), the ocular aberrations can be compensated to get high-resolution image of living human retina. However, the wavefront correction is not perfect due to the wavefront measure error and hardware restrictions. Thus, it is necessary to use a deconvolution algorithm to recover the retinal images. In this paper, a blind deconvolution technique called Incremental Wiener filter is used to restore the adaptive optics confocal scanning laser ophthalmoscope (AOSLO) images. The point-spread function (PSF) measured by wavefront sensor is only used as an initial value of our algorithm. We also realize the Incremental Wiener filter on graphics processing unit (GPU) in real-time. When the image size is 512 × 480 pixels, six iterations of our algorithm only spend about 10 ms. Retinal blood vessels as well as cells in retinal images are restored by our algorithm, and the PSFs are also revised. Retinal images with and without adaptive optics are both restored. The results show that Incremental Wiener filter reduces the noises and improve the image quality.

  6. Real-time wavefront control for the PALM-3000 high order adaptive optics system

    NASA Astrophysics Data System (ADS)

    Truong, Tuan N.; Bouchez, Antonin H.; Dekany, Richard G.; Shelton, Jean C.; Troy, Mitchell; Angione, John R.; Burruss, Rick S.; Cromer, John L.; Guiwits, Stephen R.; Roberts, Jennifer E.

    2008-07-01

    We present a cost-effective scalable real-time wavefront control architecture based on off-the-shelf graphics processing units hosted in an ultra-low latency, high-bandwidth interconnect PC cluster environment composed of modules written in the component-oriented language of nesC. We demonstrate the architecture is capable of supporting the most computation and memory intensive wavefront reconstruction method (vector-matrix-multiply) at frame rates up to 2 KHz with latency under 250 μs for the PALM-3000 adaptive optics systems, a state-of-the-art upgrade on the 5.1 meter Hale Telescope that consists of a 64x64 subaperture Shack-Hartmann wavefront sensor and a 3368 active actuator high order deformable mirror in series with a 349 actuator "woofer" DM. This architecture can easily scale up to support larger AO systems at higher rates and lower latency.

  7. Real-Time Wavefront Control for the PALM-3000 High Order Adaptive Optics System

    NASA Technical Reports Server (NTRS)

    Truong, Tuan N.; Bouchez, Antonin H.; Dekany, Richard G.; Guiwits, Stephen R.; Roberts, Jennifer E.; Troy, Mitchell

    2008-01-01

    We present a cost-effective scalable real-time wavefront control architecture based on off-the-shelf graphics processing units hosted in an ultra-low latency, high-bandwidth interconnect PC cluster environment composed of modules written in the component-oriented language of nesC. The architecture enables full-matrix reconstruction of the wavefront at up to 2 KHz with latency under 250 us for the PALM-3000 adaptive optics systems, a state-of-the-art upgrade on the 5.1 meter Hale Telescope that consists of a 64 x 64 subaperture Shack-Hartmann wavefront sensor and a 3368 active actuator high order deformable mirror in series with a 241 active actuator tweeter DM. The architecture can easily scale up to support much larger AO systems at higher rates and lower latency.

  8. Massively parallel algorithms for real-time wavefront control of a dense adaptive optics system

    SciTech Connect

    Fijany, A.; Milman, M.; Redding, D.

    1994-12-31

    In this paper massively parallel algorithms and architectures for real-time wavefront control of a dense adaptive optic system (SELENE) are presented. The authors have already shown that the computation of a near optimal control algorithm for SELENE can be reduced to the solution of a discrete Poisson equation on a regular domain. Although, this represents an optimal computation, due the large size of the system and the high sampling rate requirement, the implementation of this control algorithm poses a computationally challenging problem since it demands a sustained computational throughput of the order of 10 GFlops. They develop a novel algorithm, designated as Fast Invariant Imbedding algorithm, which offers a massive degree of parallelism with simple communication and synchronization requirements. Due to these features, this algorithm is significantly more efficient than other Fast Poisson Solvers for implementation on massively parallel architectures. The authors also discuss two massively parallel, algorithmically specialized, architectures for low-cost and optimal implementation of the Fast Invariant Imbedding algorithm.

  9. Towards real-time wavefront sensorless adaptive optics using a graphical processing unit (GPU) in a line scanning system

    NASA Astrophysics Data System (ADS)

    Biss, David P.; Patel, Ankit H.; Ferguson, R. Daniel; Mujat, Mircea; Iftimia, Nicusor; Hammer, Daniel X.

    2011-03-01

    Adaptive optics ophthalmic imaging systems that rely on a standalone wave-front sensor can be costly to build and difficult for non-technical personnel to operate. As an alternative we present a simplified wavefront sensorless adaptive optics laser scanning ophthalmoscope. This sensorless system is based on deterministic search algorithms that utilize the image's spatial frequency as an optimization metric. We implement this algorithm on a NVIDIA video card to take advantage of the graphics processing unit (GPU)'s parallel architecture to reduce algorithm computation times and approach real-time correction.

  10. The ESO adaptive optics real-time computer platform: a step toward the future

    NASA Astrophysics Data System (ADS)

    Fedrigo, Enrico; Donaldson, Robert; Soenke, Christian; Hubin, Norbert N.

    2004-10-01

    ESO now operates several AO systems in the Paranal observatory. Most of them are the outcome of different and independent efforts resulting in different and incompatible systems with all the problems of maintaining and evolving them. At the same time, industry is now proposing powerful embedded computers and new standard technologies that enable the construction of massive real time parallel computers, with a technology roadmap that looks extremely promising. The ESO AO Platform initiative aims at taking this unique opportunity of gathering all the experience accumulated so far in building and operating AO system and the recent advances offered by the industry to define and build a standard hardware and software platform able to run every AO system of the near future of the VLT with an eye towards OWL. We review the key technologies that enable the design of a common AO-RTC and we discuss the main choices of the AO Platform initiative.

  11. Real-time atmospheric imaging and processing with hybrid adaptive optics and hardware accelerated lucky-region fusion (LRF) algorithm

    NASA Astrophysics Data System (ADS)

    Liu, Jony Jiang; Carhart, Gary W.; Beresnev, Leonid A.; Aubailly, Mathieu; Jackson, Christopher R.; Ejzak, Garrett; Kiamilev, Fouad E.

    2014-09-01

    Atmospheric turbulences can significantly deteriorate the performance of long-range conventional imaging systems and create difficulties for target identification and recognition. Our in-house developed adaptive optics (AO) system, which contains high-performance deformable mirrors (DMs) and the fast stochastic parallel gradient decent (SPGD) control mechanism, allows effective compensation of such turbulence-induced wavefront aberrations and result in significant improvement on the image quality. In addition, we developed advanced digital synthetic imaging and processing technique, "lucky-region" fusion (LRF), to mitigate the image degradation over large field-of-view (FOV). The LRF algorithm extracts sharp regions from each image obtained from a series of short exposure frames and fuses them into a final improved image. We further implemented such algorithm into a VIRTEX-7 field programmable gate array (FPGA) and achieved real-time video processing. Experiments were performed by combining both AO and hardware implemented LRF processing technique over a near-horizontal 2.3km atmospheric propagation path. Our approach can also generate a universal real-time imaging and processing system with a general camera link input, a user controller interface, and a DVI video output.

  12. Real time controller for 37-element low-order solar adaptive optics system at 1m new vacuum solar telescope

    NASA Astrophysics Data System (ADS)

    Zhu, Lei; Gu, Naiting; Chen, Shanqiu; Zhang, Lanqiang; Wang, Xiaoyun; Rao, Xuejun; Li, Mei; Rao, Changhui

    A low-order solar adaptive optics (AO) system had been successfully built and installed at 1m New Vacuum Solar Telescope (NVST) of Full-shine Lake Solar Observatory. The real time controller (RTC) of the AO system, which consists of a correlation tracker and a high-order wavefront correction controller, was developed. In this system, the absolute difference algorithm is used to detect wavefront gradients. A new architecture with field-programmable gate array (FPGA) and digital signal processor (DSP) for the real-time controller based on systolic array and pipeline was designed. The controller was integrated into the AO system and saw the first light on February 24th, 2011, using solar granulation as the beacon. Later, the AO-corrected high resolution sunspots images were obtained using sunspots as the beacon. The observational results show that the contrast and resolution of the solar images are improved evidently after the correction by the AO system. The design of the RTC and the observational results will be presented.

  13. Real-time computed optical interferometric tomography

    NASA Astrophysics Data System (ADS)

    Shemonski, Nathan D.; Liu, Yuan-Zhi; Ahmad, Adeel; Adie, Steven G.; Carney, P. Scott; Boppart, Stephen A.

    2014-03-01

    High-resolution tomography is of great importance to many areas of biomedical imaging, but with it comes several apparent tradeoffs such as a narrowing depth-of-field and increasing optical aberrations. Overcoming these challenges has attracted many hardware and computational solutions. Hardware solutions, though, can become bulky or expensive and computational approaches can require high computing power or large processing times. This study demonstrates memory efficient implementations of interferometric synthetic aperture microscopy (ISAM) and computational adaptive optics (CAO) - two computational approaches for overcoming the depthof- field limitation and the effect of optical aberrations in optical coherence tomography (OCT). Traditionally requiring lengthy post processing, here we report implementations of ISAM and CAO on a single GPU for real-time in vivo imaging. Real-time, camera-limited ISAM processing enabled reliable acquisition of stable data for in vivo imaging, and CAO processing on the same GPU is shown to quickly correct static aberrations. These algorithmic advances hold the promise for high-resolution volumetric imaging in time-sensitive situations as well as enabling aberrationfree cellular-level volumetric tomography.

  14. Real-time adaptive optics testbed to investigate point-ahead angle in pre-compensation of Earth-to-GEO optical communication.

    PubMed

    Leonhard, Nina; Berlich, René; Minardi, Stefano; Barth, Alexander; Mauch, Steffen; Mocci, Jacopo; Goy, Matthias; Appelfelder, Michael; Beckert, Erik; Reinlein, Claudia

    2016-06-13

    We explore adaptive optics (AO) pre-compensation for optical communication between Earth and geostationary (GEO) satellites in a laboratory experiment. Thus, we built a rapid control prototyping breadboard with an adjustable point-ahead angle where downlink and uplink can operate both at 1064 nm and 1550 nm wavelength. With our real-time system, beam wander resulting from artificial turbulence was reduced such that the beam hits the satellite at least 66% of the time as compared to merely 3% without correction. A seven-fold increase of the average Strehl ratio to (28 ± 15)% at 18 μrad point-ahead angle leads to a considerable reduction of the calculated fading probability. These results make AO pre-compensation a viable technique to enhance Earth-to-GEO optical communication. PMID:27410333

  15. Adaptive 4~64 QAM real-time coherent optical transmission over 320 km with FPGA-based transmitter and receiver.

    PubMed

    Yoshida, Masato; Hirooka, Toshihiko; Kasai, Keisuke; Nakazawa, Masataka

    2014-06-30

    We demonstrate the first real-time adaptive optical coherent QAM transmission with variable multiplicities (4-, 16- and 64-QAM) using an FPGA-based transmitter and receiver. Rate-variable transmission (20~60 Gbit/s) was successfully achieved with a polarization multiplexing scheme at 5 Gsymbol/s over 320 km, where the OSNR margins were increased by 9 and 17 dB, respectively, by changing the modulation level from 64 to 16 and 4. PMID:24977901

  16. Experimental investigations in transmission performance of real-time long-reach adaptively modulated direct-detection optical-orthogonal frequency division multiplexing systems

    NASA Astrophysics Data System (ADS)

    Chen, Ming; He, Jing; Tang, Jin; Chen, Lin

    2014-09-01

    A real-time base-band orthogonal frequency division multiplexing (OFDM) transceiver with symbol synchronization, channel equalization, sampling clock frequency synchronization, and adaptive modulation technique is successfully implemented by field programmable gate arrays and a 2.5-GSps digital-to-analog converter and analog-to-digital converter. The real-time optical OFDM signal at a raw bit rate of 5.156 Gbps within about 1.1-GHz bandwidth transmission over 100-km standard single-mode fiber (SSMF) is experimentally investigated in a simple intensity-modulation and direct-detection system. The experimental results show that the real-time system has a good bit error rate (BER) performance by using an adaptive modulation technique according to the conditions on the subchannels. After 100-km SSMF transmission, at a BER of 1×10-3, the power penalty is <1 dB. Moreover, there is a negligible penalty between the off-line and real-time digital signal processing results.

  17. Real-time adaptive video image enhancement

    NASA Astrophysics Data System (ADS)

    Garside, John R.; Harrison, Chris G.

    1999-07-01

    As part of a continuing collaboration between the University of Manchester and British Aerospace, a signal processing array has been constructed to demonstrate that it is feasible to compensate a video signal for the degradation caused by atmospheric haze in real-time. Previously reported work has shown good agreement between a simple physical model of light scattering by atmospheric haze and the observed loss of contrast. This model predicts a characteristic relationship between contrast loss in the image and the range from the camera to the scene. For an airborne camera, the slant-range to a point on the ground may be estimated from the airplane's pose, as reported by the inertial navigation system, and the contrast may be obtained from the camera's output. Fusing data from these two streams provides a means of estimating model parameters such as the visibility and the overall illumination of the scene. This knowledge allows the same model to be applied in reverse, thus restoring the contrast lost to atmospheric haze. An efficient approximation of range is vital for a real-time implementation of the method. Preliminary results show that an adaptive approach to fitting the model's parameters, exploiting the temporal correlation between video frames, leads to a robust implementation with a significantly accelerated throughput.

  18. Aberration correction during real time in vivo imaging of bone marrow with sensorless adaptive optics confocal microscope

    NASA Astrophysics Data System (ADS)

    Wang, Zhibin; Wei, Dan; Wei, Ling; He, Yi; Shi, Guohua; Wei, Xunbin; Zhang, Yudong

    2014-08-01

    We have demonstrated adaptive correction of specimen-induced aberration during in vivo imaging of mouse bone marrow vasculature with confocal fluorescence microscopy. Adaptive optics system was completed with wavefront sensorless correction scheme based on stochastic parallel gradient descent algorithm. Using image sharpness as the optimization metric, aberration correction was performed based upon Zernike polynomial modes. The experimental results revealed the improved signal and resolution leading to a substantially enhanced image contrast with aberration correction. The image quality of vessels at 38- and 75-μm depth increased three times and two times, respectively. The corrections allowed us to detect clearer bone marrow vasculature structures at greater contrast and improve the signal-to-noise ratio.

  19. Real-time optical fiber dosimeter probe

    NASA Astrophysics Data System (ADS)

    Croteau, André; Caron, Serge; Rink, Alexandra; Jaffray, David; Mermut, Ozzy

    2011-03-01

    There is a pressing need for a passive optical fiber dosimeter probe for use in real-time monitoring of radiation dose delivered to clinical radiation therapy patients. An optical fiber probe using radiochromic material has been designed and fabricated based on a thin film of the radiochromic material on a dielectric mirror. Measurements of the net optical density vs. time before, during, and after irradiation at a rate of 500cGy/minute to a total dose of 5 Gy were performed. Net optical densities increased from 0.2 to 2.0 for radiochromic thin film thicknesses of 2 to 20 μm, respectively.

  20. Real-time optical image processing techniques

    NASA Technical Reports Server (NTRS)

    Liu, Hua-Kuang

    1988-01-01

    Nonlinear real-time optical processing on spatial pulse frequency modulation has been pursued through the analysis, design, and fabrication of pulse frequency modulated halftone screens and the modification of micro-channel spatial light modulators (MSLMs). Micro-channel spatial light modulators are modified via the Fabry-Perot method to achieve the high gamma operation required for non-linear operation. Real-time nonlinear processing was performed using the halftone screen and MSLM. The experiments showed the effectiveness of the thresholding and also showed the needs of higher SBP for image processing. The Hughes LCLV has been characterized and found to yield high gamma (about 1.7) when operated in low frequency and low bias mode. Cascading of two LCLVs should also provide enough gamma for nonlinear processing. In this case, the SBP of the LCLV is sufficient but the uniformity of the LCLV needs improvement. These include image correlation, computer generation of holograms, pseudo-color image encoding for image enhancement, and associative-retrieval in neural processing. The discovery of the only known optical method for dynamic range compression of an input image in real-time by using GaAs photorefractive crystals is reported. Finally, a new architecture for non-linear multiple sensory, neural processing has been suggested.

  1. First real-time experimental demonstrations of 11.25Gb/s optical OFDMA PONs with adaptive dynamic bandwidth allocation.

    PubMed

    Jin, X Q; Hugues-Salas, E; Giddings, R P; Wei, J L; Groenewald, J; Tang, J M

    2011-10-10

    End-to-end real-time experimental demonstrations are reported, for the first time, of aggregated 11.25Gb/s over 26.4km standard SMF, optical orthogonal frequency division multiple access (OOFDMA) PONs with adaptive dynamic bandwidth allocation (DBA). The demonstrated intensity-modulation and direct-detection (IMDD) OOFDMA PON system consists of two optical network units (ONUs), each of which employs a DFB-based directly modulated laser (DML) or a VCSEL-based DML for modulating upstream signals. Extensive experimental explorations of dynamic OOFDMA PON system properties are undertaken utilizing identified optimum DML operating conditions. It is shown that, for simultaneously achieving acceptable BERs for all upstream signals, the OOFDMA PON system has a >3dB dynamic ONU launch power variation range, and the BER performance of the system is insusceptible to any upstream symbol offsets slightly smaller than the adopted cyclic prefix. In addition, experimental results also indicate that, in addition to maximizing the aggregated system transmission capacity, adaptive DBA can also effectively reduce imperfections in transmission channel properties without affecting signal bit rates offered to individual ONUs. PMID:21997063

  2. A real-time optical data processing device

    NASA Technical Reports Server (NTRS)

    Jacobson, A.; Grinberg, J.; Bleha, W.; Miller, L.; Fraas, L.; Myer, G.; Boswell, D.

    1976-01-01

    A novel liquid-crystal electro-optical device useful as a real-time input device in coherent optical data processing is described. The device is a special adaptation of an ac photoactivated liquid-crystal light valve, and utilizes a hybrid field effect (45 deg twisted nematic effect in OFF state and pure optical birefringence of the liquid crystal in ON state). A thin-film sandwich exerts photoelectric control over the optical birefringence of a thin liquid-crystal layer. Liquid-crystal layer thickness is successfully reduced without image degradation. The device offers high resolution (better than 100 lines/mm), contrast (better than 100/1), high speed (10 msec ON, 15 msec OFF), high input sensitivity, low power input, low fabrication cost, and can be operated at below 10 V rms. Preliminary measurements on device performance in level slicing, filtering, contrast reversal, and edge enhancement are under way.

  3. Real-time turbulence profiling with a pair of laser guide star Shack-Hartmann wavefront sensors for wide-field adaptive optics systems on large to extremely large telescopes.

    PubMed

    Gilles, L; Ellerbroek, B L

    2010-11-01

    Real-time turbulence profiling is necessary to tune tomographic wavefront reconstruction algorithms for wide-field adaptive optics (AO) systems on large to extremely large telescopes, and to perform a variety of image post-processing tasks involving point-spread function reconstruction. This paper describes a computationally efficient and accurate numerical technique inspired by the slope detection and ranging (SLODAR) method to perform this task in real time from properly selected Shack-Hartmann wavefront sensor measurements accumulated over a few hundred frames from a pair of laser guide stars, thus eliminating the need for an additional instrument. The algorithm is introduced, followed by a theoretical influence function analysis illustrating its impulse response to high-resolution turbulence profiles. Finally, its performance is assessed in the context of the Thirty Meter Telescope multi-conjugate adaptive optics system via end-to-end wave optics Monte Carlo simulations. PMID:21045893

  4. UWGSP7: a real-time optical imaging workstation

    NASA Astrophysics Data System (ADS)

    Bush, John E.; Kim, Yongmin; Pennington, Stan D.; Alleman, Andrew P.

    1995-04-01

    With the development of UWGSP7, the University of Washington Image Computing Systems Laboratory has a real-time workstation for continuous-wave (cw) optical reflectance imaging. Recent discoveries in optical science and imaging research have suggested potential practical use of the technology as a medical imaging modality and identified the need for a machine to support these applications in real time. The UWGSP7 system was developed to provide researchers with a high-performance, versatile tool for use in optical imaging experiments with the eventual goal of bringing the technology into clinical use. One of several major applications of cw optical reflectance imaging is tumor imaging which uses a light-absorbing dye that preferentially sequesters in tumor tissue. This property could be used to locate tumors and to identify tumor margins intraoperatively. Cw optical reflectance imaging consists of illumination of a target with a band-limited light source and monitoring the light transmitted by or reflected from the target. While continuously illuminating the target, a control image is acquired and stored. A dye is injected into a subject and a sequence of data images are acquired and processed. The data images are aligned with the control image and then subtracted to obtain a signal representing the change in optical reflectance over time. This signal can be enhanced by digital image processing and displayed in pseudo-color. This type of emerging imaging technique requires a computer system that is versatile and adaptable. The UWGSP7 utilizes a VESA local bus PC as a host computer running the Windows NT operating system and includes ICSL developed add-on boards for image acquisition and processing. The image acquisition board is used to digitize and format the analog signal from the input device into digital frames and to the average frames into images. To accommodate different input devices, the camera interface circuitry is designed in a small mezzanine board

  5. Adaptive real-time dual-comb spectroscopy.

    PubMed

    Ideguchi, Takuro; Poisson, Antonin; Guelachvili, Guy; Picqué, Nathalie; Hänsch, Theodor W

    2014-01-01

    The spectrum of a laser frequency comb consists of several hundred thousand equally spaced lines over a broad spectral bandwidth. Such frequency combs have revolutionized optical frequency metrology and they now hold much promise for significant advances in a growing number of applications including molecular spectroscopy. Despite an intriguing potential for the measurement of molecular spectra spanning tens of nanometres within tens of microseconds at Doppler-limited resolution, the development of dual-comb spectroscopy is hindered by the demanding stability requirements of the laser combs. Here we overcome this difficulty and experimentally demonstrate a concept of real-time dual-comb spectroscopy, which compensates for laser instabilities by electronic signal processing. It only uses free-running mode-locked lasers without any phase-lock electronics. We record spectra spanning the full bandwidth of near-infrared fibre lasers with Doppler-limited line profiles highly suitable for measurements of concentrations or line intensities. Our new technique of adaptive dual-comb spectroscopy offers a powerful transdisciplinary instrument for analytical sciences. PMID:24572636

  6. Adaptive real-time dual-comb spectroscopy

    PubMed Central

    Ideguchi, Takuro; Poisson, Antonin; Guelachvili, Guy; Picqué, Nathalie; Hänsch, Theodor W.

    2014-01-01

    The spectrum of a laser frequency comb consists of several hundred thousand equally spaced lines over a broad spectral bandwidth. Such frequency combs have revolutionized optical frequency metrology and they now hold much promise for significant advances in a growing number of applications including molecular spectroscopy. Despite an intriguing potential for the measurement of molecular spectra spanning tens of nanometres within tens of microseconds at Doppler-limited resolution, the development of dual-comb spectroscopy is hindered by the demanding stability requirements of the laser combs. Here we overcome this difficulty and experimentally demonstrate a concept of real-time dual-comb spectroscopy, which compensates for laser instabilities by electronic signal processing. It only uses free-running mode-locked lasers without any phase-lock electronics. We record spectra spanning the full bandwidth of near-infrared fibre lasers with Doppler-limited line profiles highly suitable for measurements of concentrations or line intensities. Our new technique of adaptive dual-comb spectroscopy offers a powerful transdisciplinary instrument for analytical sciences. PMID:24572636

  7. Adaptive real-time dual-comb spectroscopy

    NASA Astrophysics Data System (ADS)

    Ideguchi, Takuro; Poisson, Antonin; Guelachvili, Guy; Picqué, Nathalie; Hänsch, Theodor W.

    2014-02-01

    The spectrum of a laser frequency comb consists of several hundred thousand equally spaced lines over a broad spectral bandwidth. Such frequency combs have revolutionized optical frequency metrology and they now hold much promise for significant advances in a growing number of applications including molecular spectroscopy. Despite an intriguing potential for the measurement of molecular spectra spanning tens of nanometres within tens of microseconds at Doppler-limited resolution, the development of dual-comb spectroscopy is hindered by the demanding stability requirements of the laser combs. Here we overcome this difficulty and experimentally demonstrate a concept of real-time dual-comb spectroscopy, which compensates for laser instabilities by electronic signal processing. It only uses free-running mode-locked lasers without any phase-lock electronics. We record spectra spanning the full bandwidth of near-infrared fibre lasers with Doppler-limited line profiles highly suitable for measurements of concentrations or line intensities. Our new technique of adaptive dual-comb spectroscopy offers a powerful transdisciplinary instrument for analytical sciences.

  8. Multi-channel holographic birfurcative neural network system for real-time adaptive EOS data analysis

    NASA Technical Reports Server (NTRS)

    Liu, Hua-Kuang; Diep, J.; Huang, K.

    1991-01-01

    Viewgraphs on multi-channel holographic bifurcative neural network system for real-time adaptive Earth Observing System (EOS) data analysis are presented. The objective is to research and develop an optical bifurcating neuromorphic pattern recognition system for making optical data array comparisons and to evaluate the use of the system for EOS data classification, reduction, analysis, and other applications.

  9. Real time adaptive filtering for digital X-ray applications.

    PubMed

    Bockenbach, Olivier; Mangin, Michel; Schuberth, Sebastian

    2006-01-01

    Over the last decade, many methods for adaptively filtering a data stream have been proposed. Those methods have applications in two dimensional imaging as well as in three dimensional image reconstruction. Although the primary objective of this filtering technique is to reduce the noise while avoiding to blur the edges, diagnostic, automated segmentation and surgery show a growing interest in enhancing the features contained in the image flow. Most of the methods proposed so far emerged from thorough studies of the physics of the considered modality and therefore show only a marginal capability to be extended across modalities. Moreover, adaptive filtering belongs to the family of processing intensive algorithms. Existing technology has often driven to simplifications and modality specific optimization to sustain the expected performances. In the specific case of real time digital X-ray as used surgery, the system has to sustain a throughput of 30 frames per second. In this study, we take a generalized approach for adaptive filtering based on multiple oriented filters. Mapping the filtering part to the embedded real time image processing while a user/application defined adaptive recombination of the filter outputs allow to change the smoothing and edge enhancement properties of the filter without changing the oriented filter parameters. We have implemented the filtering on a Cell Broadband Engine processor and the adaptive recombination on an off-the-shelf PC, connected via Gigabit Ethernet. This implementation is capable of filtering images of 5122 pixels at a throughput in excess of 40 frames per second while allowing to change the parameters in real time. PMID:17354937

  10. Magneto-optical system for high speed real time imaging

    NASA Astrophysics Data System (ADS)

    Baziljevich, M.; Barness, D.; Sinvani, M.; Perel, E.; Shaulov, A.; Yeshurun, Y.

    2012-08-01

    A new magneto-optical system has been developed to expand the range of high speed real time magneto-optical imaging. A special source for the external magnetic field has also been designed, using a pump solenoid to rapidly excite the field coil. Together with careful modifications of the cryostat, to reduce eddy currents, ramping rates reaching 3000 T/s have been achieved. Using a powerful laser as the light source, a custom designed optical assembly, and a high speed digital camera, real time imaging rates up to 30 000 frames per seconds have been demonstrated.

  11. Magneto-optical system for high speed real time imaging.

    PubMed

    Baziljevich, M; Barness, D; Sinvani, M; Perel, E; Shaulov, A; Yeshurun, Y

    2012-08-01

    A new magneto-optical system has been developed to expand the range of high speed real time magneto-optical imaging. A special source for the external magnetic field has also been designed, using a pump solenoid to rapidly excite the field coil. Together with careful modifications of the cryostat, to reduce eddy currents, ramping rates reaching 3000 T/s have been achieved. Using a powerful laser as the light source, a custom designed optical assembly, and a high speed digital camera, real time imaging rates up to 30 000 frames per seconds have been demonstrated. PMID:22938303

  12. Continuous focus tracking for real-time optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Cobb, Michael J.; Liu, Xiumei; Li, Xingde

    2005-07-01

    We report an approach to achieving continuous focus tracking and a depth-independent transverse resolution for real-time optical coherence tomography (OCT) imaging. Continuous real-time focus tracking is permitted by use of a lateral-priority image acquisition sequence in which the depth-scanning rate is equivalent to the imaging frame rate. Real-time OCT imaging with continuous focus tracking is performed at 1 frame/s by reciprocal translation of a rapid lateral-scanning miniature imaging probe (e.g., an endoscope). The optical path length in the reference arm is scanned synchronously to ensure that the coherence gate coincides with the imaging beam focus. The image quality improvement is experimentally demonstrated by imaging a tissue phantom embedded with polystyrene microspheres and rabbit esophageal tissues.

  13. Real-time Adaptive Control Using Neural Generalized Predictive Control

    NASA Technical Reports Server (NTRS)

    Haley, Pam; Soloway, Don; Gold, Brian

    1999-01-01

    The objective of this paper is to demonstrate the feasibility of a Nonlinear Generalized Predictive Control algorithm by showing real-time adaptive control on a plant with relatively fast time-constants. Generalized Predictive Control has classically been used in process control where linear control laws were formulated for plants with relatively slow time-constants. The plant of interest for this paper is a magnetic levitation device that is nonlinear and open-loop unstable. In this application, the reference model of the plant is a neural network that has an embedded nominal linear model in the network weights. The control based on the linear model provides initial stability at the beginning of network training. In using a neural network the control laws are nonlinear and online adaptation of the model is possible to capture unmodeled or time-varying dynamics. Newton-Raphson is the minimization algorithm. Newton-Raphson requires the calculation of the Hessian, but even with this computational expense the low iteration rate make this a viable algorithm for real-time control.

  14. Real-time optical holographic tracking of multiple objects

    NASA Technical Reports Server (NTRS)

    Chao, Tien-Hsin; Liu, Hua-Kuang

    1989-01-01

    A coherent optical correlation technique for real-time simultaneous tracking of several different objects making independent movements is described, and experimental results are presented. An evaluation of this system compared with digital computing systems is made. The real-time processing capability is obtained through the use of a liquid crystal television spatial light modulator and a dichromated gelatin multifocus hololens. A coded reference beam is utilized in the separation of the output correlation plane associated with each input target so that independent tracking can be achieved.

  15. Noncontact optical motion sensing for real-time analysis

    NASA Astrophysics Data System (ADS)

    Fetzer, Bradley R.; Imai, Hiromichi

    1990-08-01

    The adaptation of an image dissector tube (IDT) within the OPTFOLLOW system provides high resolution displacement measurement of a light discontinuity. Due to the high speed response of the IDT and the advanced servo loop circuitry, the system is capable of real time analysis of the object under test. The image of the discontinuity may be contoured by direct or reflected light and ranges spectrally within the field of visible light. The image is monitored to 500 kHz through a lens configuration which transposes the optical image upon the photocathode of the IDT. The photoelectric effect accelerates the resultant electrons through a photomultiplier and an enhanced current is emitted from the anode. A servo loop controls the electron beam, continually centering it within the IDT using magnetic focusing of deflection coils. The output analog voltage from the servo amplifier is thereby proportional to the displacement of the target. The system is controlled by a microprocessor with a 32kbyte memory and provides a digital display as well as instructional readout on a color monitor allowing for offset image tracking and automatic system calibration.

  16. Real-time detection of optical transients with RAPTOR

    SciTech Connect

    Borozdin, K. N.; Brumby, Steven P.; Galassi, M. C.; McGowan, K. E.; Starr, D. L.; Vestrand, W. T.; White, R. R.; Wozniak, P. R.; Wren, J.

    2002-01-01

    Fast variability of optical objects is an interesting though poorly explored subject in modern astronomy. Real-time data processing and identification of transient, celestial events in the images is very important, for such study as it allows rapid follow-up with more sensitive instruments, We discuss an approach which we have chosen for the RAPTOR project which is a pioneering close-loop system combining real-time transient detection with rapid follow-up. Our data processing pipeline is able to identify and localize an optical transient within seconds after the observation. We describe the challenges we met, solutions we found and some results obtained in our search for fast optical transients. The software pipeline we have developed for RAPTOR can easily be applied to the data from other experiments.

  17. Searching for Optical Transients in "Real-Time"

    NASA Astrophysics Data System (ADS)

    Vestrand, W. T.; Borozdin, K.; Brumby, S.; Casperson, D.; Fenimore, E.; Galassi, M.; Gisler, G.; McGowan, K.; Perkins, S.; Priedhorsky, W.; Wozniak, P.; Wren, J.

    2001-12-01

    A rich, but relatively unexplored, region in optical astronomy is the study of transients with durations of less than a day. We describe a wide-field optical monitoring system, RAPTOR, that is designed to identify and make follow-up observations of optical transients in real-time. The system is composed of an array of telescopes that continuously monitor about 1600 square degrees of sky for transients down to about 12th magnitude in 60 seconds and a central "fovea" telescope that can reach 16th magnitude in 60 seconds. Coupled to the telescope array is a real-time data analysis pipeline that is designed to identify transients on timescales of seconds. In a manner analogous to human vision, the entire array is mounted on a rapidly slewing robotic mount so that "fovea" of the array can be rapidly directed at transients identified by the wide-field system.

  18. Real-Time Detection of Optical Transients with RAPTOR

    NASA Astrophysics Data System (ADS)

    Borozdin, Konstantin N.; Brumby, Steven P.; Galassi, Mark C.; McGowan, Katherine; Starr, Daniel; Vestrand, Thomas; White, Robert; Wozniak, Przemek; Wren, James A.

    2002-12-01

    Fast variability of optical objects is an interesting though poorly explored subject in modern astronomy. Real-time data processing and identification of transient celestial events in the images is very important for such study as it allows rapid follow-up with more sensitive instruments. We discuss an approach which we have developed for the RAPTOR project, a pioneering closed-loop system combining real-time transient detection with rapid follow-up. RAPTOR's data processing pipeline is able to identify and localize an optical transient within seconds after the observation. The testing we performed so far have been confirming the effectiveness of our method for the optical transient detection. The software pipeline we have developed for RAPTOR can easily be applied to the data from other experiments.

  19. Optical real-time defect-enhancement diagnostic system.

    PubMed

    Gaeta, C J; Mitchell, P V; Pepper, D M

    1992-12-15

    We have demonstrated an all-optical diagnostic system that enhances the observation of defects in periodic structures. This real-time technique employs a spatial light modulator as a smart-pixel array for information processing in the Fourier transform plane of a lens. The system also includes a phase-conjugate mirror for autoalignment and for correction of optical wave-front aberrations that are imparted on the object light by the smart-pixel processor and its associated optical train. PMID:19798320

  20. Real-time tracking of moving objects by optical correlation.

    PubMed

    Gara, A D

    1979-01-15

    A low-contrast diffusely scattering object was identified and tracked in real-time by coherent optical correlation. The coherent input image is generated with a liquid crystal incoherent-to-coherent image transducer. A cast iron connecting rod (the test object) was tracked with an accuracy of 1 part in 130 over a 0.6-m distance while traveling at speeds up to 0.25 m/sec. PMID:20208682

  1. Evaluation of the Xeon phi processor as a technology for the acceleration of real-time control in high-order adaptive optics systems

    NASA Astrophysics Data System (ADS)

    Barr, David; Basden, Alastair; Dipper, Nigel; Schwartz, Noah; Vick, Andy; Schnetler, Hermine

    2014-08-01

    We present wavefront reconstruction acceleration of high-order AO systems using an Intel Xeon Phi processor. The Xeon Phi is a coprocessor providing many integrated cores and designed for accelerating compute intensive, numerical codes. Unlike other accelerator technologies, it allows virtually unchanged C/C++ to be recompiled to run on the Xeon Phi, giving the potential of making development, upgrade and maintenance faster and less complex. We benchmark the Xeon Phi in the context of AO real-time control by running a matrix vector multiply (MVM) algorithm. We investigate variability in execution time and demonstrate a substantial speed-up in loop frequency. We examine the integration of a Xeon Phi into an existing RTC system and show that performance improvements can be achieved with limited development effort.

  2. Real-time optical processor prototype for remote SAR applications

    NASA Astrophysics Data System (ADS)

    Marchese, Linda; Doucet, Michel; Harnisch, Bernd; Suess, Martin; Bourqui, Pascal; Legros, Mathieu; Desnoyers, Nichola; Guillot, Ludovic; Mercier, Luc; Savard, Maxime; Martel, Anne; Châteauneuf, François; Bergeron, Alain

    2009-09-01

    A Compact Real-Time Optical SAR Processor has been successfully developed and tested. SAR, or Synthetic Aperture Radar, is a powerful tool providing enhanced day and night imaging capabilities. SAR systems typically generate large amounts of information generally in the form of complex data that are difficult to compress. Specifically, for planetary missions and unmanned aerial vehicle (UAV) systems with limited communication data rates this is a clear disadvantage. SAR images are typically processed electronically applying dedicated Fourier transformations. This, however, can also be performed optically in real-time. Indeed, the first SAR images have been optically processed. The optical processor architecture provides inherent parallel computing capabilities that can be used advantageously for the SAR data processing. Onboard SAR image generation would provide local access to processed information paving the way for real-time decision-making. This could eventually benefit navigation strategy and instrument orientation decisions. Moreover, for interplanetary missions, onboard analysis of images could provide important feature identification clues and could help select the appropriate images to be transmitted to Earth, consequently helping bandwidth management. This could ultimately reduce the data throughput requirements and related transmission bandwidth. This paper reviews the design of a compact optical SAR processor prototype that would reduce power, weight, and size requirements and reviews the analysis of SAR image generation using the table-top optical processor. Various SAR processor parameters such as processing capabilities, image quality (point target analysis), weight and size are reviewed. Results of image generation from simulated point targets as well as real satellite-acquired raw data are presented.

  3. A real-time optical data processing device

    NASA Technical Reports Server (NTRS)

    Jacobson, A.; Grinberg, J.; Bleha, W.; Miller, L.; Fraas, L.; Myer, G.; Boswell, D.

    1975-01-01

    The design, operation, and structure of the hybrid field effect light valve, a real-time input device for application to coherent optical data processing (CODP), is described. The device consists of a sandwich of thin films that electrically control the optical birefringence of a thin (2 micrometer) liquid crystal layer. It has high resolution (greater than 100 1/mm), contrast ratio (greater than 100:1), speed (10 sec on, 15 sec off) and input sensitivity (about 0.3 ergs/sq cm) in addition to cost and size advantages. Performance data for a laboratory model are presented.

  4. Real-time incoherent-to-coherent optical converter

    NASA Technical Reports Server (NTRS)

    Vohl, P.; Nisenson, P.; Oliver, D. S.

    1973-01-01

    Description of a real-time incoherent-to-coherent optical converter designed for application in image processing systems. The converter utilizes the photoconductivity effect of the compound Bi(12)SiO(20) for spatial modulation of electrical polarization in the compound. An optically absorbed write-in image is stored as an image polarization pattern in the device. Readout is effectuated electrooptically by using phase retardation in a polarized coherent light beam during the passage through the crystal. The operating mode required for achieving continuous image conversion with a high-speed recyclability is discussed. The performance characteristics of the converter are given and the fabrication technology is described.

  5. Real-Time Adaptive Color Segmentation by Neural Networks

    NASA Technical Reports Server (NTRS)

    Duong, Tuan A.

    2004-01-01

    Artificial neural networks that would utilize the cascade error projection (CEP) algorithm have been proposed as means of autonomous, real-time, adaptive color segmentation of images that change with time. In the original intended application, such a neural network would be used to analyze digitized color video images of terrain on a remote planet as viewed from an uninhabited spacecraft approaching the planet. During descent toward the surface of the planet, information on the segmentation of the images into differently colored areas would be updated adaptively in real time to capture changes in contrast, brightness, and resolution, all in an effort to identify a safe and scientifically productive landing site and provide control feedback to steer the spacecraft toward that site. Potential terrestrial applications include monitoring images of crops to detect insect invasions and monitoring of buildings and other facilities to detect intruders. The CEP algorithm is reliable and is well suited to implementation in very-large-scale integrated (VLSI) circuitry. It was chosen over other neural-network learning algorithms because it is better suited to realtime learning: It provides a self-evolving neural-network structure, requires fewer iterations to converge and is more tolerant to low resolution (that is, fewer bits) in the quantization of neural-network synaptic weights. Consequently, a CEP neural network learns relatively quickly, and the circuitry needed to implement it is relatively simple. Like other neural networks, a CEP neural network includes an input layer, hidden units, and output units (see figure). As in other neural networks, a CEP network is presented with a succession of input training patterns, giving rise to a set of outputs that are compared with the desired outputs. Also as in other neural networks, the synaptic weights are updated iteratively in an effort to bring the outputs closer to target values. A distinctive feature of the CEP neural

  6. Real-time inverse scattering for optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Ralston, Tyler S.; Marks, Daniel L.; Carney, P. Scott; Boppart, Stephen A.

    2007-02-01

    We have developed and implemented a system which can acquire, process, and display the inverse scattering solution for optical coherence tomography (OCT) in real-time at frame rates of 2.25 fps for 512 X 1024 images. Frames which previously required 60 s, now take under 500 ms, an improvement in processing speed by a factor of over 120 times. An efficient routine was designed which requires two interpolations of the columns, one one-dimensional real-to-complex fast Fourier transform (FFT) of the columns, and two two-dimensional FFTs. The limits to speed are now reliant on the parallelizability of the processing hardware. Our system provides quantitatively meaningful structural information from previously indistinguishable scattering intensities and provides proof of feasibility for future real-time systems.

  7. ROAMing terrain (Real-time Optimally Adapting Meshes)

    SciTech Connect

    Duchaineau, M.; Wolinsky, M.; Sigeti, D.E.; Miller, M.C.; Aldrich, C.; Mineev, M.

    1997-07-01

    Terrain visualization is a difficult problem for applications requiring accurate images of large datasets at high frame rates, such as flight simulation and ground-based aircraft testing using synthetic sensor stimulation. On current graphics hardware, the problem is to maintain dynamic, view-dependent triangle meshes and texture maps that produce good images at the required frame rate. We present an algorithm for constructing triangle meshes that optimizes flexible view-dependent error metrics, produces guaranteed error bounds, achieves specified triangle counts directly, and uses frame-to-frame coherence to operate at high frame rates for thousands of triangles per frame. Our method, dubbed Real-time Optimally Adapting Meshes (ROAM), uses two priority queues to drive split and merge operations that maintain continuous triangulations built from pre-processed bintree triangles. We introduce two additional performance optimizations: incremental triangle stripping and priority-computation deferral lists. ROAM execution time is proportionate to the number of triangle changes per frame, which is typically a few percent of the output mesh size, hence ROAM performance is insensitive to the resolution and extent of the input terrain. Dynamic terrain and simple vertex morphing are supported.

  8. Real-time automatic registration in optical surgical navigation

    NASA Astrophysics Data System (ADS)

    Lin, Qinyong; Yang, Rongqian; Cai, Ken; Si, Xuan; Chen, Xiuwen; Wu, Xiaoming

    2016-05-01

    An image-guided surgical navigation system requires the improvement of the patient-to-image registration time to enhance the convenience of the registration procedure. A critical step in achieving this aim is performing a fully automatic patient-to-image registration. This study reports on a design of custom fiducial markers and the performance of a real-time automatic patient-to-image registration method using these markers on the basis of an optical tracking system for rigid anatomy. The custom fiducial markers are designed to be automatically localized in both patient and image spaces. An automatic localization method is performed by registering a point cloud sampled from the three dimensional (3D) pedestal model surface of a fiducial marker to each pedestal of fiducial markers searched in image space. A head phantom is constructed to estimate the performance of the real-time automatic registration method under four fiducial configurations. The head phantom experimental results demonstrate that the real-time automatic registration method is more convenient, rapid, and accurate than the manual method. The time required for each registration is approximately 0.1 s. The automatic localization method precisely localizes the fiducial markers in image space. The averaged target registration error for the four configurations is approximately 0.7 mm. The automatic registration performance is independent of the positions relative to the tracking system and the movement of the patient during the operation.

  9. Real-time edge-enhanced optical correlator

    NASA Technical Reports Server (NTRS)

    Liu, Tsuen-Hsi (Inventor); Cheng, Li-Jen (Inventor)

    1992-01-01

    Edge enhancement of an input image by four-wave mixing a first write beam with a second write beam in a photorefractive crystal, GaAs, was achieved for VanderLugt optical correlation with an edge enhanced reference image by optimizing the power ratio of a second write beam to the first write beam (70:1) and optimizing the power ratio of a read beam, which carries the reference image to the first write beam (100:701). Liquid crystal TV panels are employed as spatial light modulators to change the input and reference images in real time.

  10. Real-time dosimetry in radiotherapy using tailored optical fibers

    NASA Astrophysics Data System (ADS)

    Rahman, A. K. M. Mizanur; Zubair, H. T.; Begum, Mahfuza; Abdul-Rashid, H. A.; Yusoff, Z.; Omar, Nasr Y. M.; Ung, N. M.; Mat-Sharif, K. A.; Bradley, D. A.

    2016-05-01

    Real-time dosimetry plays an important role for accurate patient-dose measurement during radiotherapy. A tiny piece of laboratory fabricated Ge-doped optical fiber has been investigated as a radioluminescence (RL) sensor for real-time dosimetry over the dose range from 1 Gy to 8 Gy under 6 MV photon beam by LINAC. Fiber-coupled software-based RL prototype system was used to assess essential dosimetric characteristics including dose response linearity, dose rate dependency, sensitivity, repeatability and output dependence on field sizes. The consistency level of RL photon counts versus dose rate was also compared with that of standard Al2O3:C chips. Sensitivity of Ge-doped fiber were found to be sufficiently sensitive for practical use and also provided linear dose responses for various dose rates from 100 cGy/min to 600 cGy/min using both 6 MV photon and 6 MeV electron beams. SEM-EDX analysis was performed to identify Ge-dopant concentration level within the optical fiber RL material. Accumulated doses were also estimated using simple integral technique and the error was found to be around less than 1% under dissimilar dose rates or repeat measurements. The evaluation of the Ge-doped optical fiber based RL dosimeter system indicates its potential in medical dosimetry.

  11. Optical Sensor Demands On Real-Time Reconnaissance Data Transmission

    NASA Astrophysics Data System (ADS)

    McAhron, Max C.

    1987-02-01

    The application of optical sensors (photographic, electro-optic, and infrared) to the tactical military reconnaissance scenario is increasing both in number and performance expectations. The resolution and collection rate capabilities of these optical sensors lead to massive amounts of raw data requiring reduction and interpretation. Exploitation of the collected information must be accomplished in near-real-time (immediate to several minutes) to fully realize the sensor's potential in the tactical operating environment. Exploitation delayed hours from collection becomes useless at best and misinformation at worst. Herein, the first objective is to approximately quantify the existing capabilities for data collection, recording, and transmission, both in rate and volume. The second objective is to suggest several means whereby preprocessing may reduce the volume of data without influencing the substantive information. The third objective is to suggest means whereby the sensor utilization is more selective, thereby providing a better focus of the collection process.

  12. Real-Time Simulator of Black Hole Optics

    NASA Astrophysics Data System (ADS)

    Bakala, Pavel; Sramkova, Eva; Torok, Gabriel; Goluchova, Katerina

    Our electronic poster presents complex hardware and software simulator of an optical projection for an observer in strong gravitational field of axially symmetric rotating black holes described by the Kerr metric, spherically symmetric Schwarzschild black holes and compact neutron or quark stars. The real-time simulation was created by the application of advanced numerical methods for the integration of zero geodesics and massive parallel computing. The simulation software scans the surroundings and transforms them into a form of an optical projection in the local reference frame of the observers who are inside and outside the ergosphere, above and below the circular photon orbit and in the close vicinity of the black hole’s horizon or at the surface of a neutron star. The simulation contains all the characteristic effects of relativistic optics: multiple direct and indirect pictures, the gravitational and Doppler frequency shift, and the amplification of the intensity of the observed emission. The hardware part of the simulator uses two large TV monitors, four cameras for scanning the surroundings and two powerful laptops. This hardware configuration allows to process the whole surroundings around full 360 degrees and to model their relativistic optical projection in real time. The interactive computer simulation explicitly demonstrates the significant difference between the optics in the strong gravitational field background and the optics we know from our daily life. The properties of the latter, being seemingly obvious, have determined our perception, intuition and imagination from time immemorial. The simulator therefore provides the chance of an intuitive insight into the properties of the curved spacetimes in the vicinity of compact objects to the general public without specific knowledge of mathematical and physical background.

  13. Hybrid integrated optic modules for real-time signal processing

    NASA Technical Reports Server (NTRS)

    Tsai, C. S.

    1984-01-01

    The most recent progress on four relatively new hybrid integrated optic device modules in LiNbO3 waveguides and one in YIG/GGG waveguide that are currently being studied are discussed. The five hybrid modules include a time-integrating acoustooptic correlator, a channel waveguide acoustooptic frequency shifter/modulator, an electrooptic channel waveguide total internal reflection moculator/switch, an electrooptic analog-to-digital converter using a Fabry-Perot modulator array, and a noncollinear magnetooptic modulator using magnetostatic surface waves. All of these devices possess the desirable characteristics of very large bandwidth (GHz or higher), very small substrate size along the optical path (typically 1.5 cm or less), single-mode optical propagation, and low drive power requirement. The devices utilize either acoustooptic, electrooptic or magnetooptic effects in planar or channel waveguides and, therefore, act as efficient interface devices between a light wave and temporal signals. Major areas of application lie in wideband multichannel optical real-time signal processing and communications. Some of the specific applications include spectral analysis and correlation of radio frequency (RF) signals, fiber-optic sensing, optical computing and multiport switching/routing, and analog-to-digital conversion of wide RF signals.

  14. Multi-layer holographic bifurcative neural network system for real-time adaptive EOS data analysis

    NASA Technical Reports Server (NTRS)

    Liu, Hua-Kuang; Huang, K.; Diep, J.

    1992-01-01

    Optical data processing techniques have the inherent advantage of high data throughout, low weight and low power requirements. These features are particularly desirable for onboard spacecraft in-situ real-time data analysis and data compression applications. The proposed multi-layer optical holographic neural net pattern recognition technique will utilize the nonlinear photorefractive devices for real-time adaptive learning to classify input data content and recognize unexpected features. Information can be stored either in analog or digital form in a nonlinear photorefractive device. The recording can be accomplished in time scales ranging from milliseconds to microseconds. When a system consisting of these devices is organized in a multi-layer structure, a feed forward neural net with bifurcating data classification capability is formed. The interdisciplinary research will involve the collaboration with top digital computer architecture experts at the University of Southern California.

  15. Multi-layer holographic bifurcative neural network system for real-time adaptive EOS data analysis

    NASA Technical Reports Server (NTRS)

    Liu, Hua-Kuang; Huang, K. S.; Diep, J.

    1993-01-01

    Optical data processing techniques have the inherent advantage of high data throughout, low weight and low power requirements. These features are particularly desirable for onboard spacecraft in-situ real-time data analysis and data compression applications. the proposed multi-layer optical holographic neural net pattern recognition technique will utilize the nonlinear photorefractive devices for real-time adaptive learning to classify input data content and recognize unexpected features. Information can be stored either in analog or digital form in a nonlinear photofractive device. The recording can be accomplished in time scales ranging from milliseconds to microseconds. When a system consisting of these devices is organized in a multi-layer structure, a feedforward neural net with bifurcating data classification capability is formed. The interdisciplinary research will involve the collaboration with top digital computer architecture experts at the University of Southern California.

  16. Resource Management for Real-Time Adaptive Agents

    NASA Technical Reports Server (NTRS)

    Welch, Lonnie; Chelberg, David; Pfarr, Barbara; Fleeman, David; Parrott, David; Tan, Zhen-Yu; Jain, Shikha; Drews, Frank; Bruggeman, Carl; Shuler, Chris

    2003-01-01

    Increased autonomy and automation in onboard flight systems offer numerous potential benefits, including cost reduction and greater flexibility. The existence of generic mechanisms for automation is critical for handling unanticipated science events and anomalies where limitations in traditional control software with fixed, predetermined algorithms can mean loss of science data and missed opportunities for observing important terrestrial events. We have developed such a mechanism by adding a Hierarchical Agent-based ReaLTime technology (HART) extension to our Dynamic Resource Management (DRM) middleware. Traditional DRM provides mechanisms to monitor the realtime performance of distributed applications and to move applications among processors to improve real-time performance. In the HART project we have designed and implemented a performance adaptation mechanism to improve reaktime performance. To use this mechanism, applications are developed that can run at various levels of quality. The DRM can choose a setting for the quality level of an application dynamically at run-time in order to manage satellite resource usage more effectively. A groundbased prototype of a satellite system that captures and processes images has also been developed as part of this project to be used as a benchmark for evaluating the resource management framework A significant enhancement of this generic mission-independent framework allows scientists to specify the utility, or "scientific benefit," of science observations under various conditions like cloud cover and compression method. The resource manager then uses these benefit tables to determine in redtime how to set the quality levels for applications to maximize overall system utility as defined by the scientists running the mission. We also show how maintenance functions llke health and safety data can be integrated into the utility framework. Once thls framework has been certified for missions and successfully flight tested it

  17. Real-time in vivo computed optical interferometric tomography.

    PubMed

    Ahmad, Adeel; Shemonski, Nathan D; Adie, Steven G; Kim, Hee-Seok; Hwu, Wen-Mei W; Carney, P Scott; Boppart, Stephen A

    2013-06-01

    High-resolution real-time tomography of scattering tissues is important for many areas of medicine and biology(1-6). However, the compromise between transverse resolution and depth-of-field in addition to low sensitivity deep in tissue continue to impede progress towards cellular-level volumetric tomography. Computed imaging has the potential to solve these long-standing limitations. Interferometric synthetic aperture microscopy (ISAM)(7-9) is a computed imaging technique enabling high-resolution volumetric tomography with spatially invariant resolution. However, its potential for clinical diagnostics remains largely untapped since full volume reconstructions required lengthy postprocessing, and the phase-stability requirements have been difficult to satisfy in vivo. Here we demonstrate how 3-D Fourier-domain resampling, in combination with high-speed optical coherence tomography (OCT), can achieve high-resolution in vivo tomography. Enhanced depth sensitivity was achieved over a depth-of-field extended in real time by more than an order of magnitude. This work lays the foundation for high-speed volumetric cellular-level tomography. PMID:23956790

  18. Real-time dissipation of optical pulses in passive dielectrics

    SciTech Connect

    Glasgow, S.; Ware, M.

    2009-10-15

    We discuss the inevitable dissipation of energy that must accompany the creation of a pulse-medium excitation state in a passive dielectric. We show that there is a minimum amount of energy that an optical pulse must deposit in the medium to create a given pulse-medium state and that energy deposited beyond this minimum value must be dissipated in the medium. We compare this notion of dissipation to a related concept found by determining the fraction of energy stored in a medium that is irrecoverable by future fields. These two notions of dissipation are model-independent and form upper and lower bounds for real-time loss. Any model-dependent notion of loss that falls outside these bounds has serious conceptual difficulties. We show that a traditional notion of real-time loss based on a multiple-Lorentz oscillator model fails to give reasonable results in classes of passive linear media near EIT, while the notions of loss we introduce give sensible results for all passive media.

  19. Radiochromic leuko dye real time dosimeter, one way optical waveguide

    SciTech Connect

    Kronenberg, S.

    1982-11-15

    This invention relates generally to nuclear radiation dosimetry, and more particularly to a radiochromic leuko dye dosimeter constructed and arranged to measure absorbed radiation doses, such as gamma rays, X-rays and fast neutrons, in real time; viz., as the dose is being delivered. A radiochromic leuko dye dosimeter includes a plastic tube containing a solution of a radiochromic dye which is sensitive to ionizing radiation, one end of the tube being closed by a reflective surface, the opposite end of the tube being closed by a transparent plug to form a one-way optical waveguide. Light enters the tube through the transparent end thereof and is reflected back and exists through the transparent end. The intensity of the existing light is measured to determine radiation induced absorption of the leuko dye.

  20. Real-Time Road Surveillance By An Optical Sensor

    NASA Astrophysics Data System (ADS)

    Burkhard, Matthias; Rehfeld, Nils

    1988-04-01

    We describe a real-time optical device for vehicle detection and recognition on roads. With vehicle traffic on public roads steadily increasing, there is a growing need for efficient monitoring and control of traffic flow. There is need for traffic counting (vehicle detection), estimation of vehicle speed and for vehicle classification (i.e. passenger car, truck). An optical sensor is very well suited to this problem giving detailed information from vehicles seen from a position beside or above the road. We implemented a device for this task operating in real-time with image scanning rates of about 100 Hz. Such rates are necessary for vehicle speeds up to 100 km/h. We solved the problem of high data rates by reducing the sensor's field of view down to two parallel receptor columns with a well known spacing and by sampling the grayvalues from the columns with a rate well fitted to the minimum of the required information. The principal idea of the applied image processing is to use change detection by means of difference pictures, embedded in a dynamic scene driven control. For the reliable detection and segmentation of moving vehicles a simple vehicle model and some rough estimates of the traffic flow are used. The segmented image data of the vehicles together with the derived information are collected for further inspection and processing. The system is realized on the Visual Interpretation System for Technical Applications (VISTA) developed by the Fraunhofer Institute IITB /1/. Most data processing is performed by software. The system achieves well the picture scanning rate of 100 Hz. For experimental purposes all image processing data are continuously displayed on a video monitor.

  1. Real-time digital signal processing-based optical coherence tomography and Doppler optical coherence tomography.

    PubMed

    Schaefer, Alexander W; Reynolds, J Joshua; Marks, Daniel L; Boppart, Stephen A

    2004-01-01

    We present the development and use of a real-time digital signal processing (DSP)-based optical coherence tomography (OCT) and Doppler OCT system. Images of microstructure and transient fluid-flow profiles are acquired using the DSP architecture for real-time processing of computationally intensive calculations. This acquisition system is readily configurable for a wide range of real-time signal processing and image processing applications in OCT. PMID:14723509

  2. Medical Image Processing Using Real-Time Optical Fourier Technique

    NASA Astrophysics Data System (ADS)

    Rao, D. V. G. L. N.; Panchangam, Appaji; Sastry, K. V. L. N.; Material Science Team

    2001-03-01

    Optical Image Processing Techniques are inherently fast in view of parallel processing. A self-adaptive Optical Fourier Processing system using photo induced dichroism in a Bacteriorhodopsin film was experimentally demonstrated for medical image processing. Application of this powerful analog all-optical interactive technique for cancer diagnostics is illustrated with mammograms and Pap smears. Micro calcification clusters buried in surrounding tissue showed up clearly in the processed image. By playing with one knob, which rotates the analyzer in the optical system, either the micro calcification clusters or the surrounding dense tissue can be selectively displayed. Bacteriorhodopsin films are stable up to 140^oC and environmental friendly. As no interference is involved in the experiments, vibration isolation and even a coherent light source are not required. It may be possible to develop a low-cost rugged battery operated portable signal-enhancing magnifier.

  3. Real-Time Optical Correlator Based On GaAs

    NASA Technical Reports Server (NTRS)

    Liu, Tsuen-Hsi; Cheng, Li-Jen

    1992-01-01

    Apparatus performs correlation between input image and reference image in real time by means of degenerate four-wave mixing in photorefractive crystal, which serves as real-time holographic medium. Gallium arsenide chosen to be photorefractive material in this application because at frame rate and level of illumination used in experiments, offers adequate diffraction efficiency. Frame rates as high as 1,000 s to negative 1st power achievable.

  4. Adaptive, real-time hypoxia measurements using an autonomous boat

    NASA Astrophysics Data System (ADS)

    Kerkez, B.; Wong, B. P.; Balzano, L.; Lipor, J.; Scavia, D.

    2015-12-01

    We present an autonomous system to measure hypoxia at high spatial resolutions. The approach combines a robotic boat, cloud hosted data services, and a suite of adaptive sampling algorithms to minimize the number of samples required to delineate hypoxic extents. The boat lowers sensors into the water column to provide depth profiles of temperature and oxygen concentrations. An adaptive path-planning algorithm continuously analyzes the in-situ observations and directs the boat to its next measurement location. This significantly reduces number of samples compared to a gridded sampling approach, while simultaneously improving the certainty with which the hypoxic regions are delineated. The method has been evaluated on small lakes throughout Michigan and shows significant promise to scale to the Great Lakes, where hypoxia is common occurrence that adversely affects various stakeholder and ecosystems.

  5. Real-Time Adaptive Least-Squares Drag Minimization for Performance Adaptive Aeroelastic Wing

    NASA Technical Reports Server (NTRS)

    Ferrier, Yvonne L.; Nguyen, Nhan T.; Ting, Eric

    2016-01-01

    This paper contains a simulation study of a real-time adaptive least-squares drag minimization algorithm for an aeroelastic model of a flexible wing aircraft. The aircraft model is based on the NASA Generic Transport Model (GTM). The wing structures incorporate a novel aerodynamic control surface known as the Variable Camber Continuous Trailing Edge Flap (VCCTEF). The drag minimization algorithm uses the Newton-Raphson method to find the optimal VCCTEF deflections for minimum drag in the context of an altitude-hold flight control mode at cruise conditions. The aerodynamic coefficient parameters used in this optimization method are identified in real-time using Recursive Least Squares (RLS). The results demonstrate the potential of the VCCTEF to improve aerodynamic efficiency for drag minimization for transport aircraft.

  6. Real-Time Adaptive Foreground/Background Segmentation

    NASA Astrophysics Data System (ADS)

    Butler, Darren E.; Bove, V. Michael; Sridharan, Sridha

    2005-12-01

    The automatic analysis of digital video scenes often requires the segmentation of moving objects from a static background. Historically, algorithms developed for this purpose have been restricted to small frame sizes, low frame rates, or offline processing. The simplest approach involves subtracting the current frame from the known background. However, as the background is rarely known beforehand, the key is how to learn and model it. This paper proposes a new algorithm that represents each pixel in the frame by a group of clusters. The clusters are sorted in order of the likelihood that they model the background and are adapted to deal with background and lighting variations. Incoming pixels are matched against the corresponding cluster group and are classified according to whether the matching cluster is considered part of the background. The algorithm has been qualitatively and quantitatively evaluated against three other well-known techniques. It demonstrated equal or better segmentation and proved capable of processing [InlineEquation not available: see fulltext.] PAL video at full frame rate using only 35%-40% of a [InlineEquation not available: see fulltext.] GHz Pentium 4 computer.

  7. A real-time digital adaptive tracking controller for a dc motor

    SciTech Connect

    Hwang, S.

    1995-12-31

    The objective of this design is to implement an accurate and cost effective adaptive tracking controller for a DC motor using an 80C196kr microcontroller system. The on-chip embedded functions, optical quadrature encoder and a Pulse Width Modulated (PWM) waveform generator, are used to measure motor positions and generate DC voltages to drive a DC motor respectively. A homing routine that incorporates a photo electric sensor is used to position the motor at a reference point. Users communicate with the system through a 4x4 matrix keypad and 20x2 LCD display or through a PC. The experimental results have shown the validity of this simple microcontroller-based digital control system. This system is performed on a real-time basis, and the control law can be easily replaced by any advanced control laws without changing the hardware setup.

  8. Adaptive, spatially-varying aberration correction for real-time holographic projectors.

    PubMed

    Kaczorowski, Andrzej; Gordon, George S D; Wilkinson, Timothy D

    2016-07-11

    A method of generating an aberration- and distortion-free wide-angle holographically projected image in real time is presented. The target projector is first calibrated using an automated adaptive-optical mechanism. The calibration parameters are then fed into the hologram generation program, which applies a novel piece-wise aberration correction algorithm. The method is found to offer hologram generation times up to three orders of magnitude faster than the standard method. A projection of an aberration- and distortion-free image with a field of view of 90x45 degrees is demonstrated. The implementation on a mid-range GPU achieves high resolution at a frame rate up to 12fps. The presented methods are automated and can be performed on any holographic projector. PMID:27410846

  9. Optical, real-time monitoring of the glomerular filtration rate

    NASA Astrophysics Data System (ADS)

    Rabito, Carlos A.; Chen, Yang; Schomacker, Kevin T.; Modell, Mark D.

    2005-10-01

    An easy and accurate assessment of the renal function is a critical requirement for detecting the initial functional decline of the kidney induced by acute or chronic renal disease. A method for measuring the glomerular filtration rate is developed with the accuracy of clearance techniques and the convenience of plasma creatinine. The renal function is measured in rats as the rate of clearance determined from time-resolved transcutaneous fluorescence measurements of a new fluorescent glomerular filtration agent. The agent has a large dose-safety coefficient and the same space distribution and clearance characteristics as iothalamate. This new approach is a convenient and accurate way to perform real-time measurements of the glomerular filtration rate to detect early kidney disease before the renal function becomes severely and irreversibly compromised.

  10. A surgical confocal microlaparoscope for real-time optical biopsies

    NASA Astrophysics Data System (ADS)

    Tanbakuchi, Anthony Amir

    The first real-time fluorescence confocal microlaparoscope has been developed that provides instant in vivo cellular images, comparable to those provided by histology, through a nondestructive procedure. The device includes an integrated contrast agent delivery mechanism and a computerized depth scan system. The instrument uses a fiber bundle to relay the image plane of a slit-scan confocal microlaparoscope into tissue. The confocal laparoscope was used to image the ovaries of twenty-one patients in vivo using fluorescein sodium and acridine orange as the fluorescent contrast agents. The results indicate that the device is safe and functions as designed. A Monte Carlo model was developed to characterize the system performance in a scattering media representative of human tissues. The results indicate that a slit aperture has limited ability to image below the surface of tissue. In contrast, the results show that multi-pinhole apertures such as a Nipkow disk or a linear pinhole array can achieve nearly the same depth performance as a single pinhole aperture. The model was used to determine the optimal aperture spacing for the multi-pinhole apertures. The confocal microlaparoscope represents a new type of in vivo imaging device. With its ability to image cellular details in real time, it has the potential to aid in the early diagnosis of cancer. Initially, the device may be used to locate unusual regions for guided biopsies. In the long term, the device may be able to supplant traditional biopsies and allow the surgeon to identify early stage cancer in vivo.

  11. Real-time optical laboratory solution of parabolic differential equations

    NASA Technical Reports Server (NTRS)

    Casasent, David; Jackson, James

    1988-01-01

    An optical laboratory matrix-vector processor is used to solve parabolic differential equations (the transient diffusion equation with two space variables and time) by an explicit algorithm. This includes optical matrix-vector nonbase-2 encoded laboratory data, the combination of nonbase-2 and frequency-multiplexed data on such processors, a high-accuracy optical laboratory solution of a partial differential equation, new data partitioning techniques, and a discussion of a multiprocessor optical matrix-vector architecture.

  12. Fiber Optics Deliver Real-Time Structural Monitoring

    NASA Technical Reports Server (NTRS)

    2013-01-01

    To alter the shape of aircraft wings during flight, researchers at Dryden Flight Research Center worked on a fiber optic sensor system with Austin-based 4DSP LLC. The company has since commercialized a new fiber optic system for monitoring applications in health and medicine, oil and gas, and transportation, increasing company revenues by 60 percent.

  13. A Real-Time Optical Tracking and Measurement Processing System for Flying Targets

    PubMed Central

    Guo, Pengyu; Ding, Shaowen; Zhang, Hongliang; Zhang, Xiaohu

    2014-01-01

    Optical tracking and measurement for flying targets is unlike the close range photography under a controllable observation environment, which brings extreme conditions like diverse target changes as a result of high maneuver ability and long cruising range. This paper first designed and realized a distributed image interpretation and measurement processing system to achieve resource centralized management, multisite simultaneous interpretation and adaptive estimation algorithm selection; then proposed a real-time interpretation method which contains automatic foreground detection, online target tracking, multiple features location, and human guidance. An experiment is carried out at performance and efficiency evaluation of the method by semisynthetic video. The system can be used in the field of aerospace tests like target analysis including dynamic parameter, transient states, and optical physics characteristics, with security control. PMID:24987748

  14. A real-time optical tracking and measurement processing system for flying targets.

    PubMed

    Guo, Pengyu; Ding, Shaowen; Zhang, Hongliang; Zhang, Xiaohu

    2014-01-01

    Optical tracking and measurement for flying targets is unlike the close range photography under a controllable observation environment, which brings extreme conditions like diverse target changes as a result of high maneuver ability and long cruising range. This paper first designed and realized a distributed image interpretation and measurement processing system to achieve resource centralized management, multisite simultaneous interpretation and adaptive estimation algorithm selection; then proposed a real-time interpretation method which contains automatic foreground detection, online target tracking, multiple features location, and human guidance. An experiment is carried out at performance and efficiency evaluation of the method by semisynthetic video. The system can be used in the field of aerospace tests like target analysis including dynamic parameter, transient states, and optical physics characteristics, with security control. PMID:24987748

  15. Real-time optical monitoring of the wastewater treatment process.

    PubMed

    Tomperi, Jani; Koivuranta, Elisa; Kuokkanen, Anna; Juuso, Esko; Leiviskä, Kauko

    2016-01-01

    One activated sludge process line was optically monitored in situ by a novel image analysis equipment. The results of the image analysis were studied to find out dependencies to the process variables of the wastewater treatment plant (WWTP) and to the quality of the treated wastewater. The quality parameter of the treated wastewater, suspended solids, was modelled using the image analysis results. The model can be used for evaluating the performance of the WWTP and for the better control for stable effluent quality. It was shown that the results of the online optical monitoring reveal useful information from the process and can be used in forecasting the quality of biologically treated wastewater. The optical monitoring method together with process measurements has an important role in keeping the process in stable operating conditions and avoiding environmental risks. PMID:26238162

  16. Quantum optical arbitrary waveform manipulation and measurement in real time.

    PubMed

    Kowligy, Abijith S; Manurkar, Paritosh; Corzo, Neil V; Velev, Vesselin G; Silver, Michael; Scott, Ryan P; Yoo, S J B; Kumar, Prem; Kanter, Gregory S; Huang, Yu-Ping

    2014-11-17

    We describe a technique for dynamic quantum optical arbitrary-waveform generation and manipulation, which is capable of mode selectively operating on quantum signals without inducing significant loss or decoherence. It is built upon combining the developed tools of quantum frequency conversion and optical arbitrary waveform generation. Considering realistic parameters, we propose and analyze applications such as programmable reshaping of picosecond-scale temporal modes, selective frequency conversion of any one or superposition of those modes, and mode-resolved photon counting. We also report on experimental progress to distinguish two overlapping, orthogonal temporal modes, demonstrating over 8 dB extinction between picosecond-scale time-frequency modes, which agrees well with our theory. Our theoretical and experimental progress, as a whole, points to an enabling optical technique for various applications such as ultradense quantum coding, unity-efficiency cavity-atom quantum memories, and high-speed quantum computing. PMID:25402035

  17. Real-time processing for Fourier domain optical coherence tomography using a field programmable gate array

    PubMed Central

    Ustun, Teoman E.; Iftimia, Nicusor V.; Ferguson, R. Daniel; Hammer, Daniel X.

    2008-01-01

    Real-time display of processed Fourier domain optical coherence tomography (FDOCT) images is important for applications that require instant feedback of image information, for example, systems developed for rapid screening or image-guided surgery. However, the computational requirements for high-speed FDOCT image processing usually exceeds the capabilities of most computers and therefore display rates rarely match acquisition rates for most devices. We have designed and developed an image processing system, including hardware based upon a field programmable gated array, firmware, and software that enables real-time display of processed images at rapid line rates. The system was designed to be extremely flexible and inserted in-line between any FDOCT detector and any Camera Link frame grabber. Two versions were developed for spectrometer-based and swept source-based FDOCT systems, the latter having an additional custom high-speed digitizer on the front end but using all the capabilities and features of the former. The system was tested in humans and monkeys using an adaptive optics retinal imager, in zebrafish using a dual-beam Doppler instrument, and in human tissue using a swept source microscope. A display frame rate of 27 fps for fully processed FDOCT images (1024 axial pixels×512 lateral A-scans) was achieved in the spectrometer-based systems. PMID:19045902

  18. Real-time caries diagnostics by optical PNC method

    NASA Astrophysics Data System (ADS)

    Masychev, Victor I.; Alexandrov, Michail T.

    2000-11-01

    The results of hard tooth tissues research by the optical PNC- method in experimental and clinical conditions are presented. In the experiment under 90 test-sample of tooth slices with thickness about 1mm (enamel, dentine and cement) were researched. The results of the experiment were processed by the method of correlation analyze. Clinical researches were executed on teeth of 210 patients. The regions of tooth tissue diseases with initial, moderate and deep caries were investigated. Spectral characteristics of intact and pathologically changed tooth tissues are presented and their peculiar features are discussed. The results the optical PNC-method application while processing tooth carious cavities are presented in order to estimate efficiency of the mechanical and antiseptic processing of teeth. It is revealed that the PNC-method can be sued as for differential diagnostics of a degree dental carious stage, as for estimating of carefulness of tooth cavity processing before filling.

  19. Features: Real-Time Adaptive Feature and Document Learning for Web Search.

    ERIC Educational Resources Information Center

    Chen, Zhixiang; Meng, Xiannong; Fowler, Richard H.; Zhu, Binhai

    2001-01-01

    Describes Features, an intelligent Web search engine that is able to perform real-time adaptive feature (i.e., keyword) and document learning. Explains how Features learns from users' document relevance feedback and automatically extracts and suggests indexing keywords relevant to a search query, and learns from users' keyword relevance feedback…

  20. Remote mission specialist - A study in real-time, adaptive planning

    NASA Technical Reports Server (NTRS)

    Rokey, Mark J.

    1990-01-01

    A high-level planning architecture for robotic operations is presented. The remote mission specialist integrates high-level directives with low-level primitives executable by a run-time controller for command of autonomous servicing activities. The planner has been designed to address such issues as adaptive plan generation, real-time performance, and operator intervention.

  1. Radiochromic leuko dye real time dosimeter, one way optical waveguide

    SciTech Connect

    Kronenberg, S.; McLaughlin, W.L.; Siebentritt, C.R.

    1984-12-18

    A radiochromic leuko dye dosimeter includes a plastic tube containing a solution of a radiochromic dye which is sensitive to ionizing radiation, one end of the tube being closed by a reflective surface, the opposite end of the tube being closed by a transparent plug to form a one-way optical waveguide. Light enters the tube through the transparent end thereof and is reflected back and exits through the transparent end. The intensity of the exiting light is measured to determine radiation induced absorption of the leuko dye.

  2. Real-time Optical Network for Accelerator Control

    SciTech Connect

    Lee, Keun

    2012-06-27

    The timing requirements of a modern accelerator complex call for several features. The first is a system for high precision relative timing among accelerator components. Stabilized fiber links have already been demonstrated to achieve sub-10 femtoseconds relative timing precision. The second is a system for timing distribution of absolute time with sufficient precision to identify a specific RF bucket. The White Rabbit technology is a promising candidate to deliver the absolute time that is linked to the GPS clock. In this study we demonstrated that these two technologies can be combined in a way that the absolute time information can be delivered to the stabilized fiber link system. This was accomplished by researching the design of the stabilized fiber and White Rabbit systems and devising adaptation modules that facilitate co-existence of both systems in the same FPGA environment. We built a prototype system using off-the-shelf products and implemented a proof-of-concept version of the FPGA firmware. The test verified that the White Rabbit features operate correctly under the stabilized fiber system environment. This work demonstrates that turn-key femtosecond timing systems with absolute time information can be built cost effectively and deployed in various accelerator environments. This will lead to many new applications in chemistry, biology and surface dynamics, to name a few.

  3. Real-time control of geometry and stiffness in adaptive structures

    NASA Technical Reports Server (NTRS)

    Ramesh, A. V.; Utku, S.; Wada, B. K.

    1991-01-01

    The basic theory is presented for the geometry, stiffness, and damping control of adaptive structures, with emphasis on adaptive truss structures. Necessary and sufficient conditions are given for stress-free geometry control in statically determinate and indeterminate adaptive discrete structures. Two criteria for selecting the controls are proposed, and their use in real-time control is illustrated by numerical simulation results. It is shown that the stiffness and damping control of adaptive truss structures for vibration suppression is possible by elongation and elongation rate dependent feedback forces from the active elements.

  4. Real Time Data Processing for Optical Remote Sensing Payloads

    NASA Astrophysics Data System (ADS)

    Wohlfeil, J.; Börner, A.; Buder, M.; Ernst, I.; Krutz, D.; Reulke, R.

    2012-07-01

    The application of operational systems for remote sensing requires new approaches for data processing. It has to be the goal to derive user relevant information close the sensor itself and to downlink this information to a ground station or to provide them as input to an actuator of the space-borne platform. A complete automation of data processing is an essential first step for a thematic onboard data processing. In a second step, an appropriate onboard computer system has to be de-signed being able to fulfill the requirements. In this paper, standard data processing steps will be introduced correcting systematic errors during image capturing. A new hardware operating system, which is the interface between FPGA hardware and data processing algorithms, gives the opportunity to implement complex data processing modules in an effective way. As an example the derivation the camera's orientation based on data of an optical payload is described in detail. The thereby derived absolute or relative orientation is essential for high level data products. This will be illustrated by means of an onboard image matcher

  5. Computing the total atmospheric refraction for real-time optical imaging sensor simulation

    NASA Astrophysics Data System (ADS)

    Olson, Richard F.

    2015-05-01

    Fast and accurate computation of light path deviation due to atmospheric refraction is an important requirement for real-time simulation of optical imaging sensor systems. A large body of existing literature covers various methods for application of Snell's Law to the light path ray tracing problem. This paper provides a discussion of the adaptation to real time simulation of atmospheric refraction ray tracing techniques used in mid-1980's LOWTRAN releases. The refraction ray trace algorithm published in a LOWTRAN-6 technical report by Kneizys (et. al.) has been coded in MATLAB for development, and in C-language for simulation use. To this published algorithm we have added tuning parameters for variable path segment lengths, and extensions for Earth grazing and exoatmospheric "near Earth" ray paths. Model atmosphere properties used to exercise the refraction algorithm were obtained from tables published in another LOWTRAN-6 related report. The LOWTRAN-6 based refraction model is applicable to atmospheric propagation at wavelengths in the IR and visible bands of the electromagnetic spectrum. It has been used during the past two years by engineers at the U.S. Army Aviation and Missile Research, Development and Engineering Center (AMRDEC) in support of several advanced imaging sensor simulations. Recently, a faster (but sufficiently accurate) method using Gauss-Chebyshev Quadrature integration for evaluating the refraction integral was adopted.

  6. In vivo dynamic process imaging using real-time optical-resolution photoacoustic microscopy

    NASA Astrophysics Data System (ADS)

    Shi, Wei; Shao, Peng; Hajireza, Parsin; Forbrich, Alexander; Zemp, Roger J.

    2013-02-01

    The authors demonstrate in vivo dynamic process imaging using a label-free real-time optical-resolution photoacoustic microscope (OR-PAM). This reflection-mode system takes advantage of a 532-nm fiber laser source with a high pulse repetition rate of up to 600 kHz combined with a fast-scanning mirror system. Microvasculature in SCID mouse ears is imaged at near real-time (0.5 fps) for a 1×1 mm2 field of view (FOV) with micron-scale lateral resolution. We also demonstrate imaging of cardiac-induced microhemodynamics in murine microvasculature at real-time frame-rates (30 fps) over a 250×250 μ FOV using real-time C-scan OR-PAM with ability to provide sustained imaging with near real-time feedback for focusing and positioning.

  7. In vivo dynamic process imaging using real-time optical-resolution photoacoustic microscopy.

    PubMed

    Shi, Wei; Shao, Peng; Hajireza, Parsin; Forbrich, Alexander; Zemp, Roger J

    2013-02-01

    The authors demonstrate in vivo dynamic process imaging using a label-free real-time optical-resolution photoacoustic microscope (OR-PAM). This reflection-mode system takes advantage of a 532-nm fiber laser source with a high pulse repetition rate of up to 600 kHz combined with a fast-scanning mirror system. Microvasculature in SCID mouse ears is imaged at near real-time (0.5 fps) for a 1×1 mm2 field of view (FOV) with micron-scale lateral resolution. We also demonstrate imaging of cardiac-induced microhemodynamics in murine microvasculature at real-time frame-rates (30 fps) over a 250×250 μm2 FOV using real-time C-scan OR-PAM with ability to provide sustained imaging with near real-time feedback for focusing and positioning. PMID:23377002

  8. Real-time optical path control method that utilizes multiple support vector machines for traffic prediction

    NASA Astrophysics Data System (ADS)

    Kawase, Hiroshi; Mori, Yojiro; Hasegawa, Hiroshi; Sato, Ken-ichi

    2016-02-01

    An effective solution to the continuous Internet traffic expansion is to offload traffic to lower layers such as the L2 or L1 optical layers. One possible approach is to introduce dynamic optical path operations such as adaptive establishment/tear down according to traffic variation. Path operations cannot be done instantaneously; hence, traffic prediction is essential. Conventional prediction techniques need optimal parameter values to be determined in advance by averaging long-term variations from the past. However, this does not allow adaptation to the ever-changing short-term variations expected to be common in future networks. In this paper, we propose a real-time optical path control method based on a machinelearning technique involving support vector machines (SVMs). A SVM learns the most recent traffic characteristics, and so enables better adaptation to temporal traffic variations than conventional techniques. The difficulty lies in determining how to minimize the time gap between optical path operation and buffer management at the originating points of those paths. The gap makes the required learning data set enormous and the learning process costly. To resolve the problem, we propose the adoption of multiple SVMs running in parallel, trained with non-overlapping subsets of the original data set. The maximum value of the outputs of these SVMs will be the estimated number of necessary paths. Numerical experiments prove that our proposed method outperforms a conventional prediction method, the autoregressive moving average method with optimal parameter values determined by Akaike's information criterion, and reduces the packet-loss ratio by up to 98%.

  9. Adaptive Kalman filtering for real-time mapping of the visual field

    PubMed Central

    Ward, B. Douglas; Janik, John; Mazaheri, Yousef; Ma, Yan; DeYoe, Edgar A.

    2013-01-01

    This paper demonstrates the feasibility of real-time mapping of the visual field for clinical applications. Specifically, three aspects of this problem were considered: (1) experimental design, (2) statistical analysis, and (3) display of results. Proper experimental design is essential to achieving a successful outcome, particularly for real-time applications. A random-block experimental design was shown to have less sensitivity to measurement noise, as well as greater robustness to error in modeling of the hemodynamic impulse response function (IRF) and greater flexibility than common alternatives. In addition, random encoding of the visual field allows for the detection of voxels that are responsive to multiple, not necessarily contiguous, regions of the visual field. Due to its recursive nature, the Kalman filter is ideally suited for real-time statistical analysis of visual field mapping data. An important feature of the Kalman filter is that it can be used for nonstationary time series analysis. The capability of the Kalman filter to adapt, in real time, to abrupt changes in the baseline arising from subject motion inside the scanner and other external system disturbances is important for the success of clinical applications. The clinician needs real-time information to evaluate the success or failure of the imaging run and to decide whether to extend, modify, or terminate the run. Accordingly, the analytical software provides real-time displays of (1) brain activation maps for each stimulus segment, (2) voxel-wise spatial tuning profiles, (3) time plots of the variability of response parameters, and (4) time plots of activated volume. PMID:22100663

  10. Rapid scanning all-reflective optical delay line for real-time optical coherence tomography.

    PubMed

    Liu, Xiumei; Cobb, Michael J; Li, Xingde

    2004-01-01

    We describe a dispersion-free high-speed scanning optical delay line that is suitable for real-time optical coherence tomography, in particular, when an ultrabroadband light source is used. The delay line is based on all-reflective optics consisting of two flat and one curved mirrors. We achieve optical path-length scanning by oscillating one of the two flat mirrors with a resonant galvanometer. The delay line is compact and easy to implement. A total scanning depth of 1.50 mm with an 89% duty ratio, a maximal scanning speed of approximately 9.1 m/s, and a 4.1-kHz repetition rate has been demonstrated. PMID:14719667

  11. Verification and Validation Methodology of Real-Time Adaptive Neural Networks for Aerospace Applications

    NASA Technical Reports Server (NTRS)

    Gupta, Pramod; Loparo, Kenneth; Mackall, Dale; Schumann, Johann; Soares, Fola

    2004-01-01

    Recent research has shown that adaptive neural based control systems are very effective in restoring stability and control of an aircraft in the presence of damage or failures. The application of an adaptive neural network with a flight critical control system requires a thorough and proven process to ensure safe and proper flight operation. Unique testing tools have been developed as part of a process to perform verification and validation (V&V) of real time adaptive neural networks used in recent adaptive flight control system, to evaluate the performance of the on line trained neural networks. The tools will help in certification from FAA and will help in the successful deployment of neural network based adaptive controllers in safety-critical applications. The process to perform verification and validation is evaluated against a typical neural adaptive controller and the results are discussed.

  12. Performance evaluation of gratings applied by genetic algorithm for the real-time optical interconnection

    NASA Astrophysics Data System (ADS)

    Yoon, Jin-Seon; Kim, Nam; Suh, HoHyung; Jeon, Seok Hee

    2000-03-01

    In this paper, gratings to apply for the optical interconnection are designed using a genetic algorithm (GA) for a robust and efficient schema. The real-time optical interconnection system architecture is composed with LC-SLM, CCD array detector, IBM-PC, He-Ne laser, and Fourier transform lens. A pixelated binary phase grating is displayed on LC-SLM and could interconnect incoming beams to desired output spots freely by real-time. So as to adapt a GA for finding near globally-cost solutions, a chromosome is coded as a binary integer of length 32 X 32, the stochastic tournament method for decreasing the stochastic sampling error is performed, and a single-point crossover having 16 X 16 block size is used. The characteristics on the several parameters are analyzed in the desired grating design. Firstly, as the analysis of the effect on the probability of crossover, a designed grating when the probability of crossover is 0.75 has a 74.7[%] high diffraction efficiency and a 1.73 X 10-1 uniformity quantitatively, where the probability of mutation is 0.001 and the population size is 300. Secondly, on the probability of mutation, a designed grating when the probability of mutation is 0.001 has a 74.4[%] high efficiency and a 1.61 X 10-1 uniformity quantitatively, where the probability of crossover is 1.0 and the population size is 300. Thirdly, on the population size, a designed grating when the population size is 300 and the generation is 400 has above 74[%] diffraction efficiency, where the probability of mutation is 0.001 and the probability of crossover is 1.0.

  13. Real-time restoration of white-light confocal microscope optical sections

    PubMed Central

    Balasubramanian, Madhusudhanan; Iyengar, S. Sitharama; Beuerman, Roger W.; Reynaud, Juan; Wolenski, Peter

    2009-01-01

    Confocal microscopes (CM) are routinely used for building 3-D images of microscopic structures. Nonideal imaging conditions in a white-light CM introduce additive noise and blur. The optical section images need to be restored prior to quantitative analysis. We present an adaptive noise filtering technique using Karhunen–Loéve expansion (KLE) by the method of snapshots and a ringing metric to quantify the ringing artifacts introduced in the images restored at various iterations of iterative Lucy–Richardson deconvolution algorithm. The KLE provides a set of basis functions that comprise the optimal linear basis for an ensemble of empirical observations. We show that most of the noise in the scene can be removed by reconstructing the images using the KLE basis vector with the largest eigenvalue. The prefiltering scheme presented is faster and does not require prior knowledge about image noise. Optical sections processed using the KLE prefilter can be restored using a simple inverse restoration algorithm; thus, the methodology is suitable for real-time image restoration applications. The KLE image prefilter outperforms the temporal-average prefilter in restoring CM optical sections. The ringing metric developed uses simple binary morphological operations to quantify the ringing artifacts and confirms with the visual observation of ringing artifacts in the restored images. PMID:20186290

  14. Real-time motion-adaptive-optimization (MAO) in TomoTherapy

    NASA Astrophysics Data System (ADS)

    Lu, Weiguo; Chen, Mingli; Ruchala, Kenneth J.; Chen, Quan; Langen, Katja M.; Kupelian, Patrick A.; Olivera, Gustavo H.

    2009-07-01

    IMRT delivery follows a planned leaf sequence, which is optimized before treatment delivery. However, it is hard to model real-time variations, such as respiration, in the planning procedure. In this paper, we propose a negative feedback system of IMRT delivery that incorporates real-time optimization to account for intra-fraction motion. Specifically, we developed a feasible workflow of real-time motion-adaptive-optimization (MAO) for TomoTherapy delivery. TomoTherapy delivery is characterized by thousands of projections with a fast projection rate and ultra-fast binary leaf motion. The technique of MAO-guided delivery calculates (i) the motion-encoded dose that has been delivered up to any given projection during the delivery and (ii) the future dose that will be delivered based on the estimated motion probability and future fluence map. These two pieces of information are then used to optimize the leaf open time of the upcoming projection right before its delivery. It consists of several real-time procedures, including 'motion detection and prediction', 'delivered dose accumulation', 'future dose estimation' and 'projection optimization'. Real-time MAO requires that all procedures are executed in time less than the duration of a projection. We implemented and tested this technique using a TomoTherapy® research system. The MAO calculation took about 100 ms per projection. We calculated and compared MAO-guided delivery with two other types of delivery, motion-without-compensation delivery (MD) and static delivery (SD), using simulated 1D cases, real TomoTherapy plans and the motion traces from clinical lung and prostate patients. The results showed that the proposed technique effectively compensated for motion errors of all test cases. Dose distributions and DVHs of MAO-guided delivery approached those of SD, for regular and irregular respiration with a peak-to-peak amplitude of 3 cm, and for medium and large prostate motions. The results conceptually proved that

  15. Real-time measurements of the largest Lyapunov exponent in optical fields

    NASA Astrophysics Data System (ADS)

    Gavrylyak, M. S.; Maksimyak, P. P.

    2012-01-01

    An analog interference method for measuring the largest Lyapunov exponent in optical fields generated by scattering objects and mediums is proposed. The method is used to make a device for high-speed real time transverse correlation function optical fields measurement.

  16. Real-time measurements of the largest Lyapunov exponent in optical fields

    NASA Astrophysics Data System (ADS)

    Gavrylyak, M. S.; Maksimyak, P. P.

    2011-09-01

    An analog interference method for measuring the largest Lyapunov exponent in optical fields generated by scattering objects and mediums is proposed. The method is used to make a device for high-speed real time transverse correlation function optical fields measurement.

  17. Real Time Updating Genetic Network Programming for Adapting to the Change of Stock Prices

    NASA Astrophysics Data System (ADS)

    Chen, Yan; Mabu, Shingo; Shimada, Kaoru; Hirasawa, Kotaro

    The key in stock trading model is to take the right actions for trading at the right time, primarily based on the accurate forecast of future stock trends. Since an effective trading with given information of stock prices needs an intelligent strategy for the decision making, we applied Genetic Network Programming (GNP) to creating a stock trading model. In this paper, we propose a new method called Real Time Updating Genetic Network Programming (RTU-GNP) for adapting to the change of stock prices. There are three important points in this paper: First, the RTU-GNP method makes a stock trading decision considering both the recommendable information of technical indices and the candlestick charts according to the real time stock prices. Second, we combine RTU-GNP with a Sarsa learning algorithm to create the programs efficiently. Also, sub-nodes are introduced in each judgment and processing node to determine appropriate actions (buying/selling) and to select appropriate stock price information depending on the situation. Third, a Real Time Updating system has been firstly introduced in our paper considering the change of the trend of stock prices. The experimental results on the Japanese stock market show that the trading model with the proposed RTU-GNP method outperforms other models without real time updating. We also compared the experimental results using the proposed method with Buy&Hold method to confirm its effectiveness, and it is clarified that the proposed trading model can obtain much higher profits than Buy&Hold method.

  18. Optimized quantum sensing with a single electron spin using real-time adaptive measurements

    NASA Astrophysics Data System (ADS)

    Bonato, C.; Blok, M. S.; Dinani, H. T.; Berry, D. W.; Markham, M. L.; Twitchen, D. J.; Hanson, R.

    2016-03-01

    Quantum sensors based on single solid-state spins promise a unique combination of sensitivity and spatial resolution. The key challenge in sensing is to achieve minimum estimation uncertainty within a given time and with high dynamic range. Adaptive strategies have been proposed to achieve optimal performance, but their implementation in solid-state systems has been hindered by the demanding experimental requirements. Here, we realize adaptive d.c. sensing by combining single-shot readout of an electron spin in diamond with fast feedback. By adapting the spin readout basis in real time based on previous outcomes, we demonstrate a sensitivity in Ramsey interferometry surpassing the standard measurement limit. Furthermore, we find by simulations and experiments that adaptive protocols offer a distinctive advantage over the best known non-adaptive protocols when overhead and limited estimation time are taken into account. Using an optimized adaptive protocol we achieve a magnetic field sensitivity of 6.1 ± 1.7 nT Hz-1/2 over a wide range of 1.78 mT. These results open up a new class of experiments for solid-state sensors in which real-time knowledge of the measurement history is exploited to obtain optimal performance.

  19. Real-Time Robust Adaptive Modeling and Scheduling for an Electronic Commerce Server

    NASA Astrophysics Data System (ADS)

    Du, Bing; Ruan, Chun

    With the increasing importance and pervasiveness of Internet services, it is becoming a challenge for the proliferation of electronic commerce services to provide performance guarantees under extreme overload. This paper describes a real-time optimization modeling and scheduling approach for performance guarantee of electronic commerce servers. We show that an electronic commerce server may be simulated as a multi-tank system. A robust adaptive server model is subject to unknown additive load disturbances and uncertain model matching. Overload control techniques are based on adaptive admission control to achieve timing guarantees. We evaluate the performance of the model using a complex simulation that is subjected to varying model parameters and massive overload.

  20. Real-time phase measurement of optical vortices based on pixelated micropolarizer array.

    PubMed

    Zhang, Zhigang; Dong, Fengliang; Qian, Kemao; Zhang, Qingchuan; Chu, Weiguo; Zhang, Yuntian; Ma, Xuan; Wu, Xiaoping

    2015-08-10

    The special spiral phase structure of an optical vortex leads to an intriguing study in modern singular optics. This paper proposes a real-time phase measurement method of vortex beam based on pixelated micropolarizer array (PMA). Four phase-shifting fringe images can be obtained from a single interference image, thus the vortex beam phase can be obtained in real-time. The proposed method can achieve full-field phase measurement of the vortex beam with the advantages of lower computation and vibration resistance. In the experiments, the typical phases of vortex with different topological charges are loaded on a spatial light modulator (SLM) to generate diffraction vortex beam, and the phase distribution of vortex beam is obtained in real-time, which confirm the robustness of this method. This method is of great significance in promoting the study of optical vortices. PMID:26367904

  1. A highly adjustable magnetorheological elastomer base isolator for applications of real-time adaptive control

    NASA Astrophysics Data System (ADS)

    Li, Yancheng; Li, Jianchun; Tian, Tongfei; Li, Weihua

    2013-09-01

    Inspired by its controllable and field-dependent stiffness/damping properties, there has been increasing research and development of magnetorheological elastomer (MRE) for mitigation of unwanted structural or machinery vibrations using MRE isolators or absorbers. Recently, a breakthrough pilot research on the development of a highly innovative prototype adaptive MRE base isolator, with the ability for real-time adaptive control of base isolated structures against various types of earthquakes including near- or far-fault earthquakes, has been reported by the authors. As a further effort to improve the proposed MRE adaptive base isolator and to address some of the shortcomings and challenges, this paper presents systematic investigations on the development of a new highly adjustable MRE base isolator, including experimental testing and characterization of the new isolator. A soft MR elastomer has been designed, fabricated and incorporated in the laminated structure of the new MRE base isolator, which aims to obtain a highly adjustable shear modulus under a medium level of magnetic field. Comprehensive static and dynamic testing was conducted on this new adaptive MRE base isolator to examine its characteristics and evaluate its performance. The experimental results show that this new MRE base isolator can remarkably change the lateral stiffness of the isolator up to 1630% under a medium level of magnetic field. Such highly adjustable MRE base isolator makes the design and implementation of truly real-time adaptive (e.g. semi-active or smart passive) seismic isolation systems become feasible.

  2. Real-time quantitative fluorescence imaging using a single snapshot optical properties technique for neurosurgical guidance

    NASA Astrophysics Data System (ADS)

    Valdes, Pablo A.; Angelo, Joseph; Gioux, Sylvain

    2015-03-01

    Fluorescence imaging has shown promise as an adjunct to improve the extent of resection in neurosurgery and oncologic surgery. Nevertheless, current fluorescence imaging techniques do not account for the heterogeneous attenuation effects of tissue optical properties. In this work, we present a novel imaging system that performs real time quantitative fluorescence imaging using Single Snapshot Optical Properties (SSOP) imaging. We developed the technique and performed initial phantom studies to validate the quantitative capabilities of the system for intraoperative feasibility. Overall, this work introduces a novel real-time quantitative fluorescence imaging method capable of being used intraoperatively for neurosurgical guidance.

  3. Real-time artificial intelligence issues in the development of the adaptive tactical navigator

    NASA Technical Reports Server (NTRS)

    Green, Peter E.; Glasson, Douglas P.; Pomarede, Jean-Michel L.; Acharya, Narayan A.

    1987-01-01

    Adaptive Tactical Navigation (ATN) is a laboratory prototype of a knowledge based system to provide navigation system management and decision aiding in the next generation of tactical aircraft. ATN's purpose is to manage a set of multimode navigation equipment, dynamically selecting the best equipment to use in accordance with mission goals and phase, threat environment, equipment malfunction status, and battle damage. ATN encompasses functions as diverse as sensor data interpretation, diagnosis, and planning. Real time issues that were identified in ATN and the approaches used to address them are addressed. Functional requirements and a global architecture for the ATN system are described. Decision making with time constraints are discussed. Two subproblems are identified; making decisions with incomplete information and with limited resources. Approaches used in ATN to address real time performance are described and simulation results are discussed.

  4. A novel algorithm for real-time adaptive signal detection and identification

    SciTech Connect

    Sleefe, G.E.; Ladd, M.D.; Gallegos, D.E.; Sicking, C.W.; Erteza, I.A.

    1998-04-01

    This paper describes a novel digital signal processing algorithm for adaptively detecting and identifying signals buried in noise. The algorithm continually computes and updates the long-term statistics and spectral characteristics of the background noise. Using this noise model, a set of adaptive thresholds and matched digital filters are implemented to enhance and detect signals that are buried in the noise. The algorithm furthermore automatically suppresses coherent noise sources and adapts to time-varying signal conditions. Signal detection is performed in both the time-domain and the frequency-domain, thereby permitting the detection of both broad-band transients and narrow-band signals. The detection algorithm also provides for the computation of important signal features such as amplitude, timing, and phase information. Signal identification is achieved through a combination of frequency-domain template matching and spectral peak picking. The algorithm described herein is well suited for real-time implementation on digital signal processing hardware. This paper presents the theory of the adaptive algorithm, provides an algorithmic block diagram, and demonstrate its implementation and performance with real-world data. The computational efficiency of the algorithm is demonstrated through benchmarks on specific DSP hardware. The applications for this algorithm, which range from vibration analysis to real-time image processing, are also discussed.

  5. Real-time microstructural and functional imaging and image processing in optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Westphal, Volker

    Optical Coherence Tomography (OCT) is a noninvasive optical imaging technique that allows high-resolution cross-sectional imaging of tissue microstructure, achieving a spatial resolution of about 10 mum. OCT is similar to B-mode ultrasound (US) except that it uses infrared light instead of ultrasound. In contrast to US, no coupling gel is needed, simplifying the image acquisition. Furthermore, the fiber optic implementation of OCT is compatible with endoscopes. In recent years, the transition from slow imaging, bench-top systems to real-time clinical systems has been under way. This has lead to a variety of applications, namely in ophthalmology, gastroenterology, dermatology and cardiology. First, this dissertation will demonstrate that OCT is capable of imaging and differentiating clinically relevant tissue structures in the gastrointestinal tract. A careful in vitro correlation study between endoscopic OCT images and corresponding histological slides was performed. Besides structural imaging, OCT systems were further developed for functional imaging, as for example to visualize blood flow. Previously, imaging flow in small vessels in real-time was not possible. For this research, a new processing scheme similar to real-time Doppler in US was introduced. It was implemented in dedicated hardware to allow real-time acquisition and overlayed display of blood flow in vivo. A sensitivity of 0.5mm/s was achieved. Optical coherence microscopy (OCM) is a variation of OCT, improving the resolution even further to a few micrometers. Advances made in the OCT scan engine for the Doppler setup enabled real-time imaging in vivo with OCM. In order to generate geometrical correct images for all the previous applications in real-time, extensive image processing algorithms were developed. Algorithms for correction of distortions due to non-telecentric scanning, nonlinear scan mirror movements, and refraction were developed and demonstrated. This has led to interesting new

  6. Enhancing the Quality of Service for Real Time Traffic over Optical Burst Switching (OBS) Networks with Ensuring the Fairness for Other Traffics.

    PubMed

    Al-Shargabi, Mohammed A; Shaikh, Asadullah; Ismail, Abdulsamad S

    2016-01-01

    Optical burst switching (OBS) networks have been attracting much consideration as a promising approach to build the next generation optical Internet. A solution for enhancing the Quality of Service (QoS) for high priority real time traffic over OBS with the fairness among the traffic types is absent in current OBS' QoS schemes. In this paper we present a novel Real Time Quality of Service with Fairness Ratio (RT-QoSFR) scheme that can adapt the burst assembly parameters according to the traffic QoS needs in order to enhance the real time traffic QoS requirements and to ensure the fairness for other traffic. The results show that RT-QoSFR scheme is able to fulfill the real time traffic requirements (end to end delay, and loss rate) ensuring the fairness for other traffics under various conditions such as the type of real time traffic and traffic load. RT-QoSFR can guarantee that the delay of the real time traffic packets does not exceed the maximum packets transfer delay value. Furthermore, it can reduce the real time traffic packets loss, at the same time guarantee the fairness for non real time traffic packets by determining the ratio of real time traffic inside the burst to be 50-60%, 30-40%, and 10-20% for high, normal, and low traffic loads respectively. PMID:27583557

  7. A novel adaptive, real-time algorithm to detect gait events from wearable sensors.

    PubMed

    Chia Bejarano, Noelia; Ambrosini, Emilia; Pedrocchi, Alessandra; Ferrigno, Giancarlo; Monticone, Marco; Ferrante, Simona

    2015-05-01

    A real-time, adaptive algorithm based on two inertial and magnetic sensors placed on the shanks was developed for gait-event detection. For each leg, the algorithm detected the Initial Contact (IC), as the minimum of the flexion/extension angle, and the End Contact (EC) and the Mid-Swing (MS), as minimum and maximum of the angular velocity, respectively. The algorithm consisted of calibration, real-time detection, and step-by-step update. Data collected from 22 healthy subjects (21 to 85 years) walking at three self-selected speeds were used to validate the algorithm against the GaitRite system. Comparable levels of accuracy and significantly lower detection delays were achieved with respect to other published methods. The algorithm robustness was tested on ten healthy subjects performing sudden speed changes and on ten stroke subjects (43 to 89 years). For healthy subjects, F1-scores of 1 and mean detection delays lower than 14 ms were obtained. For stroke subjects, F1-scores of 0.998 and 0.944 were obtained for IC and EC, respectively, with mean detection delays always below 31 ms. The algorithm accurately detected gait events in real time from a heterogeneous dataset of gait patterns and paves the way for the design of closed-loop controllers for customized gait trainings and/or assistive devices. PMID:25069118

  8. Practical Method of Adaptive Radiotherapy for Prostate Cancer Using Real-Time Electromagnetic Tracking

    SciTech Connect

    Olsen, Jeffrey R.; Noel, Camille E.; Baker, Kenneth; Santanam, Lakshmi; Michalski, Jeff M.; Parikh, Parag J.

    2012-04-01

    Purpose: We have created an automated process using real-time tracking data to evaluate the adequacy of planning target volume (PTV) margins in prostate cancer, allowing a process of adaptive radiotherapy with minimal physician workload. We present an analysis of PTV adequacy and a proposed adaptive process. Methods and Materials: Tracking data were analyzed for 15 patients who underwent step-and-shoot multi-leaf collimation (SMLC) intensity-modulated radiation therapy (IMRT) with uniform 5-mm PTV margins for prostate cancer using the Calypso Registered-Sign Localization System. Additional plans were generated with 0- and 3-mm margins. A custom software application using the planned dose distribution and structure location from computed tomography (CT) simulation was developed to evaluate the dosimetric impact to the target due to motion. The dose delivered to the prostate was calculated for the initial three, five, and 10 fractions, and for the entire treatment. Treatment was accepted as adequate if the minimum delivered prostate dose (D{sub min}) was at least 98% of the planned D{sub min}. Results: For 0-, 3-, and 5-mm PTV margins, adequate treatment was obtained in 3 of 15, 12 of 15, and 15 of 15 patients, and the delivered D{sub min} ranged from 78% to 99%, 96% to 100%, and 99% to 100% of the planned D{sub min}. Changes in D{sub min} did not correlate with magnitude of prostate motion. Treatment adequacy during the first 10 fractions predicted sufficient dose delivery for the entire treatment for all patients and margins. Conclusions: Our adaptive process successfully used real-time tracking data to predict the need for PTV modifications, without the added burden of physician contouring and image analysis. Our methods are applicable to other uses of real-time tracking, including hypofractionated treatment.

  9. Hierarchical Adaptive Means (HAM) clustering for hardware-efficient, unsupervised and real-time spike sorting.

    PubMed

    Paraskevopoulou, Sivylla E; Wu, Di; Eftekhar, Amir; Constandinou, Timothy G

    2014-09-30

    This work presents a novel unsupervised algorithm for real-time adaptive clustering of neural spike data (spike sorting). The proposed Hierarchical Adaptive Means (HAM) clustering method combines centroid-based clustering with hierarchical cluster connectivity to classify incoming spikes using groups of clusters. It is described how the proposed method can adaptively track the incoming spike data without requiring any past history, iteration or training and autonomously determines the number of spike classes. Its performance (classification accuracy) has been tested using multiple datasets (both simulated and recorded) achieving a near-identical accuracy compared to k-means (using 10-iterations and provided with the number of spike classes). Also, its robustness in applying to different feature extraction methods has been demonstrated by achieving classification accuracies above 80% across multiple datasets. Last but crucially, its low complexity, that has been quantified through both memory and computation requirements makes this method hugely attractive for future hardware implementation. PMID:25035965

  10. Real-time in vivo imaging by high-speed spectral optical coherence tomography.

    PubMed

    Wojtkowski, Maciej; Bajraszewski, Tomasz; Targowski, Piotr; Kowalczyk, Andrzej

    2003-10-01

    An improved spectral optical coherence tomography technique is used to obtain cross-sectional ophthalmic images at an exposure time of 64 micros per A-scan. This method allows real-time images as well as static tomograms to be recorded in vivo. PMID:14514087

  11. Real-Time Adaptive Control Allocation Applied to a High Performance Aircraft

    NASA Technical Reports Server (NTRS)

    Davidson, John B.; Lallman, Frederick J.; Bundick, W. Thomas

    2001-01-01

    Abstract This paper presents the development and application of one approach to the control of aircraft with large numbers of control effectors. This approach, referred to as real-time adaptive control allocation, combines a nonlinear method for control allocation with actuator failure detection and isolation. The control allocator maps moment (or angular acceleration) commands into physical control effector commands as functions of individual control effectiveness and availability. The actuator failure detection and isolation algorithm is a model-based approach that uses models of the actuators to predict actuator behavior and an adaptive decision threshold to achieve acceptable false alarm/missed detection rates. This integrated approach provides control reconfiguration when an aircraft is subjected to actuator failure, thereby improving maneuverability and survivability of the degraded aircraft. This method is demonstrated on a next generation military aircraft Lockheed-Martin Innovative Control Effector) simulation that has been modified to include a novel nonlinear fluid flow control control effector based on passive porosity. Desktop and real-time piloted simulation results demonstrate the performance of this integrated adaptive control allocation approach.

  12. Adaptive mode control of a few-mode fiber by real-time mode decomposition.

    PubMed

    Huang, Liangjin; Leng, Jinyong; Zhou, Pu; Guo, Shaofeng; Lü, Haibin; Cheng, Xiang'ai

    2015-10-19

    A novel approach to adaptively control the beam profile in a few-mode fiber is experimentally demonstrated. We stress the fiber through an electric-controlled polarization controller, whose driven voltage depends on the current and target modal content difference obtained with the real-time mode decomposition. We have achieved selective excitations of LP01 and LP11 modes, as well as significant improvement of the beam quality factor, which may play crucial roles for high-power fiber lasers, fiber based telecommunication systems and other fundamental researches and applications. PMID:26480466

  13. An optical real-time 3D measurement for analysis of facial shape and movement

    NASA Astrophysics Data System (ADS)

    Zhang, Qican; Su, Xianyu; Chen, Wenjing; Cao, Yiping; Xiang, Liqun

    2003-12-01

    Optical non-contact 3-D shape measurement provides a novel and useful tool for analysis of facial shape and movement in presurgical and postsurgical regular check. In this article we present a system, which allows a precise 3-D visualization of the patient's facial before and after craniofacial surgery. We discussed, in this paper, the real time 3-D image capture, processing and the 3-D phase unwrapping method to recover complex shape deformation when the movement of the mouth. The result of real-time measurement for facial shape and movement will be helpful for the more ideal effect in plastic surgery.

  14. [Real-time forecasting model for monitoring pollutant with differential optical absorption spectroscopy].

    PubMed

    Li, Su-Wen; Liu, Wen-Qing; Xie, Pin-Hua; Wang, Feng-Sui; Yang, Yi-Jun

    2009-11-01

    For real-time and on-line monitoring DOAS (differential optical absorption spectroscopy) system, a model based on an improved Elman network for monitoring pollutant concentrations was proposed. In order to reduce the systematical complexity, the forecasting factors have been obtained based on the step-wise regression method. The forecasting factors were current concentrations, temperature and relative humidity, and wind speed and wind direction. The dynamic back propagation (BP) algorithm was used for creating training set. The experiment results show that the predicted value follows the real well. So the modified Elman network can meet the demand of DOAS system's real time forecasting. PMID:20101985

  15. Full-field detection of surface defects using real-time holography and optical correlation techniques

    NASA Astrophysics Data System (ADS)

    Blackshire, James L.; Duncan, Bradley D.

    1999-02-01

    Innovative optical NDE techniques are being developed for the full-field detection and evaluation of surface defects and defect precursors in titanium and aluminum based alloys. The techniques are based on frequency-translated holography and optical correlation principles, and use bacteriohodopsin (bR) holographic films and temporal correlation techniques for real-time storage and retrieval of Surface Acoustic Waves (SAW) features and embedded surface defect information. The SAW waves induced on the material surface being studied are made to interfere with optical light waves, and fringes are produced that are a function of optical Doppler shifts induced by phonon-photon interaction on the surface of the materials. Visualization of these SAW patterns allow for NDE characterization of features on and near the surface of the materials, including defect and defect precursor sites. Preliminary results are provided for real-time bR holographic recordings of acoustic patterns induced on Al2024-T3 material surfaces.

  16. Real-time pattern recognition using an optical generalized Hough transform.

    PubMed

    Fernández, Ariel; Flores, Jorge L; Alonso, Julia R; Ferrari, José A

    2015-12-20

    We present some pattern recognition applications of a generalized optical Hough transform and the temporal multiplexing strategies for dynamic scale and orientation-variant detection. Unlike computer-based implementations of the Hough transform, in principle its optical implementation does not impose restrictions on the execution time or on the resolution of the images or frame rate of the videos to be processed, which is potentially useful for real-time applications. Validation experiments are presented. PMID:26837021

  17. A robust adaptive denoising framework for real-time artifact removal in scalp EEG measurements

    NASA Astrophysics Data System (ADS)

    Kilicarslan, Atilla; Grossman, Robert G.; Contreras-Vidal, Jose Luis

    2016-04-01

    Objective. Non-invasive measurement of human neural activity based on the scalp electroencephalogram (EEG) allows for the development of biomedical devices that interface with the nervous system for scientific, diagnostic, therapeutic, or restorative purposes. However, EEG recordings are often considered as prone to physiological and non-physiological artifacts of different types and frequency characteristics. Among them, ocular artifacts and signal drifts represent major sources of EEG contamination, particularly in real-time closed-loop brain-machine interface (BMI) applications, which require effective handling of these artifacts across sessions and in natural settings. Approach. We extend the usage of a robust adaptive noise cancelling (ANC) scheme ({H}∞ filtering) for removal of eye blinks, eye motions, amplitude drifts and recording biases simultaneously. We also characterize the volume conduction, by estimating the signal propagation levels across all EEG scalp recording areas due to ocular artifact generators. We find that the amplitude and spatial distribution of ocular artifacts vary greatly depending on the electrode location. Therefore, fixed filtering parameters for all recording areas would naturally hinder the true overall performance of an ANC scheme for artifact removal. We treat each electrode as a separate sub-system to be filtered, and without the loss of generality, they are assumed to be uncorrelated and uncoupled. Main results. Our results show over 95-99.9% correlation between the raw and processed signals at non-ocular artifact regions, and depending on the contamination profile, 40-70% correlation when ocular artifacts are dominant. We also compare our results with the offline independent component analysis and artifact subspace reconstruction methods, and show that some local quantities are handled better by our sample-adaptive real-time framework. Decoding performance is also compared with multi-day experimental data from 2 subjects

  18. Real-Time Accelerated Interactive MRI With Adaptive TSENSE and UNFOLD

    PubMed Central

    Guttman, Michael A.; Kellman, Peter; Dick, Alexander J.; Lederman, Robert J.; McVeigh, Elliot R.

    2007-01-01

    Reduced field-of-view (FOV) acceleration using time-adaptive sensitivity encoding (TSENSE) or unaliasing by Fourier encoding the overlaps using the temporal dimension (UNFOLD) can improve the depiction of motion in real-time MRI. However, increased computational resources are required to maintain a high frame rate and low latency in image reconstruction and display. A high-performance software system has been implemented to perform TSENSE and UNFOLD reconstructions for real-time MRI with interactive, on-line display. Images were displayed in the scanner room to investigate image-guided procedures. Examples are shown for normal volunteers and cardiac interventional experiments in animals using a steady-state free precession (SSFP) sequence. In order to maintain adequate image quality for interventional procedures, the imaging rate was limited to seven frames per second after an acceleration factor of 2 with a voxel size of 1.8 × 3.5 × 8 mm. Initial experiences suggest that TSENSE and UNFOLD can each improve the compromise between spatial and temporal resolution in real-time imaging, and can function well in interactive imaging. UNFOLD places no additional constraints on receiver coils, and is therefore more flexible than SENSE methods; however, the temporal image filtering can blur motion and reduce the effective acceleration. Methods are proposed to overcome the challenges presented by the use of TSENSE in interactive imaging. TSENSE may be temporarily disabled after changing the imaging plane to avoid transient artifacts as the sensitivity coefficients adapt. For imaging with a combination of surface and interventional coils, a hybrid reconstruction approach is proposed whereby UNFOLD is used for the interventional coils, and TSENSE with or without UNFOLD is used for the surface coils. PMID:12876708

  19. Real time endoscopic and functional imaging of biological ultrastructure using optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Rollins, Andrew Martin

    2000-10-01

    Optical coherence tomography (OCT) is a relatively new, non-invasive optical imaging technique. OCT is well suited to in situ imaging of biological ultrastructure, providing micron-scale resolution in three dimensions to a depth of a few millimeters without contacting the tissue. The objective of this research was to advance the state of the art in OCT imaging in order to enable endoscopic examination of gastrointestinal mucosae, and to explore functional imaging extensions to the technology. We present a high speed OCT system capable of imaging in real time. Issues critical to real time OCT imaging are discussed, with an emphasis on rapid scanning optical delay lines, and real time signal conditioning, acquisition, and display instrumentation. Results of experiments demonstrating real time OCT imaging are presented, including in vivo samples. The real time OCT system was integrated with a custom catheter probe in a prototype endoscopic OCT (EOCT) unit appropriate for clinical studies. We report on the design and initial clinical experience with the real-time EOCT imaging system. Results of initial clinical studies are presented. EOCT imaging clearly delineates the substructure of the mucosa and submucosa in several gastrointestinal organs. Color Doppler optical coherence tomography (CDOCT) is a functional extension of OCT that can image flow in turbid media with micron-scale spatial resolution. We present a real-time CDOCT system that is capable of imaging flow at high frame rates. Imaging of flow in tissue simulating phantom and in vivo in an animal model is demonstrated. Further, we introduce a family of power-conserving fiber- optic interferometer designs for OCT. Simple design equations for optimization of the signal to noise ratio of the interferometers are expressed in terms of relevant signal and noise sources and measurable system parameters. Finally, we discuss a number of future directions for OCT research. The spectroscopic OCT techniques of wavelength

  20. Data rate management and real time operation: recursive adaptive frame integration of limited data

    NASA Astrophysics Data System (ADS)

    Rafailov, Michael K.

    2006-08-01

    Recursive Limited Frame Integration was proposed as a way to improve frame integration performance and mitigate issues related to high data rate needed to support conventional frame integration. The technique uses two thresholds -one tuned for optimum probability of detection, the other to manage required false alarm rate, and places integration process between those thresholds. This configuration allows a non-linear integration process that, along with Signal-to-Noise Ratio (SNR) gain, provides system designers more capability where cost, weight, or power considerations limit system data rate, processing, or memory capability. However, Recursive Frame Integration Limited may have performance issues when single-frame SNR is really low. Recursive Adaptive Limited Frame Integration was proposed as a means to improve limited integration performance with really low single-frame SNR. It combines the benefits of nonlinear recursive limited frame integration and adaptive thresholds with a kind of conventional frame integration. Adding the third threshold may help in managing real time operations. In the paper the Recursive Frame Integration is presented in form of multiple parallel recursive integration. Such an approach can help not only in data rate management but in mitigation of low single frame SNR issue for Recursive Integration as well as in real time operations with frame integration.

  1. Real-Time Adaptive EEG Source Separation Using Online Recursive Independent Component Analysis.

    PubMed

    Hsu, Sheng-Hsiou; Mullen, Tim R; Jung, Tzyy-Ping; Cauwenberghs, Gert

    2016-03-01

    Independent component analysis (ICA) has been widely applied to electroencephalographic (EEG) biosignal processing and brain-computer interfaces. The practical use of ICA, however, is limited by its computational complexity, data requirements for convergence, and assumption of data stationarity, especially for high-density data. Here we study and validate an optimized online recursive ICA algorithm (ORICA) with online recursive least squares (RLS) whitening for blind source separation of high-density EEG data, which offers instantaneous incremental convergence upon presentation of new data. Empirical results of this study demonstrate the algorithm's: 1) suitability for accurate and efficient source identification in high-density (64-channel) realistically-simulated EEG data; 2) capability to detect and adapt to nonstationarity in 64-ch simulated EEG data; and 3) utility for rapidly extracting principal brain and artifact sources in real 61-channel EEG data recorded by a dry and wearable EEG system in a cognitive experiment. ORICA was implemented as functions in BCILAB and EEGLAB and was integrated in an open-source Real-time EEG Source-mapping Toolbox (REST), supporting applications in ICA-based online artifact rejection, feature extraction for real-time biosignal monitoring in clinical environments, and adaptable classifications in brain-computer interfaces. PMID:26685257

  2. Real-time In-Flight Strain and Deflection Monitoring with Fiber Optic Sensors

    NASA Technical Reports Server (NTRS)

    Richards, Lance; Parker, Allen R.; Ko, William L.; Piazza, Anthony

    2008-01-01

    This viewgraph presentation reviews Dryden's efforts to develop in-flight monitoring based on Fiber Optics. One of the motivating factors for this development was the breakup of the Helios aircraft. On Ikhana the use of fiber optics for wing shape sensing is being developed. They are being used to flight validate fiber optic sensor measurements and real-time wing shape sensing predictions on NASA's Ikhana vehicle; validate fiber optic mathematical models and design tools; Assess technical viability and, if applicable, develop methodology and approach to incorporate wing shape measurements within the vehicle flight control system, and develop and flight validate advanced approaches to perform active wing shape control.

  3. Optical time-domain analog pattern correlator for high-speed real-time image recognition.

    PubMed

    Kim, Sang Hyup; Goda, Keisuke; Fard, Ali; Jalali, Bahram

    2011-01-15

    The speed of image processing is limited by image acquisition circuitry. While optical pattern recognition techniques can reduce the computational burden on digital image processing, their image correlation rates are typically low due to the use of spatial optical elements. Here we report a method that overcomes this limitation and enables fast real-time analog image recognition at a record correlation rate of 36.7 MHz--1000 times higher rates than conventional methods. This technique seamlessly performs image acquisition, correlation, and signal integration all optically in the time domain before analog-to-digital conversion by virtue of optical space-to-time mapping. PMID:21263506

  4. The Information Adaptive System - A demonstration of real-time onboard image processing

    NASA Technical Reports Server (NTRS)

    Thomas, G. L.; Carney, P. C.; Meredith, B. D.

    1983-01-01

    The Information Adaptive System (IAS) program has the objective to develop and demonstrate, at the brassboard level, an architecture which can be used to perform advanced signal procesing functions on board the spacecraft. Particular attention is given to the processing of high-speed multispectral imaging data in real-time, and the development of advanced technology which could be employed for future space applications. An IAS functional description is provided, and questions of radiometric correction are examined. Problems of data packetization are considered along with data selection, a distortion coefficient processor, an adaptive system controller, an image processing demonstration system, a sensor simulator and output data buffer, a test support and demonstration controller, and IAS demonstration operating modes.

  5. [Non-linear real-time adaptive filtration of ultrasound TI628A echotomoscope images].

    PubMed

    Barannik, E A; Volokhov, Iu V; Marusenko, A I

    1997-01-01

    The statistical uncertainty caused by speckle noise artifacts is the reason for the great importance of the problem which is the optimum choice between the medical diagnostic systems resolution and the statistical accuracy of histological tissue identification. The way of speckle noise suppression, which is closely associated with the well-known idea of adaptive filtration and based on the physical analysis of the origin of true and false signals, is very promising. The testing results of the nonlinear real-time adaptive filter which has been designed for a TI628A echotomoscope are presented. The filter has been shown to have a rather high contrast and space resolution and reduces the speckle noise and other artifacts of the images. PMID:9445983

  6. Real-time Graphics Processing Unit Based Fourier Domain Optical Coherence Tomography and Surgical Applications

    NASA Astrophysics Data System (ADS)

    Zhang, Kang

    2011-12-01

    In this dissertation, real-time Fourier domain optical coherence tomography (FD-OCT) capable of multi-dimensional micrometer-resolution imaging targeted specifically for microsurgical intervention applications was developed and studied. As a part of this work several ultra-high speed real-time FD-OCT imaging and sensing systems were proposed and developed. A real-time 4D (3D+time) OCT system platform using the graphics processing unit (GPU) to accelerate OCT signal processing, the imaging reconstruction, visualization, and volume rendering was developed. Several GPU based algorithms such as non-uniform fast Fourier transform (NUFFT), numerical dispersion compensation, and multi-GPU implementation were developed to improve the impulse response, SNR roll-off and stability of the system. Full-range complex-conjugate-free FD-OCT was also implemented on the GPU architecture to achieve doubled image range and improved SNR. These technologies overcome the imaging reconstruction and visualization bottlenecks widely exist in current ultra-high speed FD-OCT systems and open the way to interventional OCT imaging for applications in guided microsurgery. A hand-held common-path optical coherence tomography (CP-OCT) distance-sensor based microsurgical tool was developed and validated. Through real-time signal processing, edge detection and feed-back control, the tool was shown to be capable of track target surface and compensate motion. The micro-incision test using a phantom was performed using a CP-OCT-sensor integrated hand-held tool, which showed an incision error less than +/-5 microns, comparing to >100 microns error by free-hand incision. The CP-OCT distance sensor has also been utilized to enhance the accuracy and safety of optical nerve stimulation. Finally, several experiments were conducted to validate the system for surgical applications. One of them involved 4D OCT guided micro-manipulation using a phantom. Multiple volume renderings of one 3D data set were

  7. Searching for Optical Transients in Real-Time: The RAPTOR Experiment

    NASA Astrophysics Data System (ADS)

    Vestrand, W. T.; Borozdin, K.; Brumby, S. P.; Casperson, D.; Fenimore, E.; Galassi, M.; Gisler, G.; McGowan, K.; Perkins, S.; Priedhorsky, W.; Starr, D.; White, R.; Wozniak, P.; Wren, J.

    2003-04-01

    A rich, but relatively unexplored, region in optical astronomy is the study of transients with durations of less than a day. We describe a wide-field optical monitoring system, RAPTOR, which is designed to identify and make follow-up observations of optical transients in real-time. The system is composed of an array of telescopes that continuously monitor about 1500 square degrees of the sky for transients down to about 12th magnitude in 60 seconds and a central fovea telescope that can reach 16th magnitude in 60 seconds. Coupled to the telescope array is a real-time data analysis pipeline that is designed to identify transients on timescales of seconds. In a manner analogous to human vision, the entire array is mounted on a rapidly slewing robotic mount so that the fovea of the array can be rapidly directed at transients identified by the wide-field system. The goal of the project is to develop a ground-based optical system that can reliably identify transients in real-time and ultimately generate alerts with source locations to enable follow-up observations with other, larger, telescopes.

  8. Searching for optical transients in real-time : the RAPTOR experiment /.

    SciTech Connect

    Vestrand, W. T.; Borozdin, K. N.; Brumby, Steven P.; Casperson, D. E.; Fenimore, Edward E.; Galassi, M. C.; Gisler, Galen R.; McGowan, K. E.; Perkins, S. J.; Priedhorsky, W. C.; Starr, D. L.; White, R. A.; Wozniak, Przemyslaw; Wren, J.

    2002-01-01

    A rich, but relatively unexplored, region in optical astronomy is the study of transients with durations of less than a day. We describe a wide-field optical monitoring system, RAPTOR, which is designed to identify and make follow-up observations of optical transients in real-time. The system is composed of an array of telescopes that continuously monitor about 1500 square degrees of the sky for transients down to about 12' magnitude in 60 seconds and a central fovea telescope that can reach 16{approx}m' agnitude in 60 seconds. Coupled to the telescope array is a real-time data analysis pipeline that is designed to identify transients on timescales of seconds. In a manner analogous to human vision, the entire array is mounted on a rapidly slewing robotic mount so that the fovea of the array can be rapidly directed at transients identified by the wide-field system. The goal of the project is to develop a ground-based optical system that can reliably identify transients in real-time and ultimately generate alerts with source locations to enable follow-up observations wilh other, larger, telescopes.

  9. Hard real-time beam scheduler enables adaptive images in multi-probe systems

    NASA Astrophysics Data System (ADS)

    Tobias, Richard J.

    2014-03-01

    Real-time embedded-system concepts were adapted to allow an imaging system to responsively control the firing of multiple probes. Large-volume, operator-independent (LVOI) imaging would increase the diagnostic utility of ultrasound. An obstacle to this innovation is the inability of current systems to drive multiple transducers dynamically. Commercial systems schedule scanning with static lists of beams to be fired and processed; here we allow an imager to adapt to changing beam schedule demands, as an intelligent response to incoming image data. An example of scheduling changes is demonstrated with a flexible duplex mode two-transducer application mimicking LVOI imaging. Embedded-system concepts allow an imager to responsively control the firing of multiple probes. Operating systems use powerful dynamic scheduling algorithms, such as fixed priority preemptive scheduling. Even real-time operating systems lack the timing constraints required for ultrasound. Particularly for Doppler modes, events must be scheduled with sub-nanosecond precision, and acquired data is useless without this requirement. A successful scheduler needs unique characteristics. To get close to what would be needed in LVOI imaging, we show two transducers scanning different parts of a subjects leg. When one transducer notices flow in a region where their scans overlap, the system reschedules the other transducer to start flow mode and alter its beams to get a view of the observed vessel and produce a flow measurement. The second transducer does this in a focused region only. This demonstrates key attributes of a successful LVOI system, such as robustness against obstructions and adaptive self-correction.

  10. Space Weather Prediction Error Bounding for Real-Time Ionospheric Threat Adaptation of GNSS Augmentation Systems

    NASA Astrophysics Data System (ADS)

    Lee, J.; Yoon, M.; Lee, J.

    2014-12-01

    Current Global Navigation Satellite Systems (GNSS) augmentation systems attempt to consider all possible ionospheric events in their correction computations of worst-case errors. This conservatism can be mitigated by subdividing anomalous conditions and using different values of ionospheric threat-model bounds for each class. A new concept of 'real-time ionospheric threat adaptation' that adjusts the threat model in real time instead of always using the same 'worst-case' model was introduced in my previous research. The concept utilizes predicted values of space weather indices for determining the corresponding threat model based on the pre-defined worst-case threat as a function of space weather indices. Since space weather prediction is not reliable due to prediction errors, prediction errors are needed to be bounded to the required level of integrity of the system being supported. The previous research performed prediction error bounding using disturbance, storm time (Dst) index. The distribution of Dst prediction error over the 15-year data was bounded by applying 'inflated-probability density function (pdf) Gaussian bounding'. Since the error distribution has thick and non-Gaussian tails, investigation on statistical distributions which properly describe heavy tails with less conservatism is required for the system performance. This paper suggests two potential approaches for improving space weather prediction error bounding. First, we suggest using different statistical models when fit the error distribution, such as the Laplacian distribution which has fat tails, and the folded Gaussian cumulative distribution function (cdf) distribution. Second approach is to bound the error distribution by segregating data based on the overall level of solar activity. Bounding errors using only solar minimum period data will have less uncertainty and it may allow the use of 'solar cycle prediction' provided by NASA when implementing to real-time threat adaptation. Lastly

  11. Electromagnetic Detection and Real-Time DMLC Adaptation to Target Rotation During Radiotherapy

    SciTech Connect

    Wu Junqing; Ruan, Dan; Cho, Byungchul; Sawant, Amit; Petersen, Jay; Newell, Laurence J.; Cattell, Herbert; Keall, Paul J.

    2012-03-01

    Purpose: Intrafraction rotation of more than 45 Degree-Sign and 25 Degree-Sign has been observed for lung and prostate tumors, respectively. Such rotation is not routinely adapted to during current radiotherapy, which may compromise tumor dose coverage. The aim of the study was to investigate the geometric and dosimetric performance of an electromagnetically guided real-time dynamic multileaf collimator (DMLC) tracking system to adapt to intrafractional tumor rotation. Materials/Methods: Target rotation was provided by changing the treatment couch angle. The target rotation was measured by a research Calypso system integrated with a real-time DMLC tracking system employed on a Varian linac. The geometric beam-target rotational alignment difference was measured using electronic portal images. The dosimetric accuracy was quantified using a two-dimensional ion chamber array. For each beam, the following five delivery modes were tested: 1) nonrotated target (reference); 2) fixed rotated target with tracking; 3) fixed rotated target without tracking; 4) actively rotating target with tracking; and 5) actively rotating target without tracking. Dosimetric performance of the latter four modes was measured and compared to the reference dose distribution using a 3 mm/3% {gamma}-test. Results: Geometrically, the beam-target rotational alignment difference was 0.3 Degree-Sign {+-} 0.6 Degree-Sign for fixed rotation and 0.3 Degree-Sign {+-} 1.3 Degree-Sign for active rotation. Dosimetrically, the average failure rate for the {gamma}-test for a fixed rotated target was 11% with tracking and 36% without tracking. The average failure rate for an actively rotating target was 9% with tracking and 35% without tracking. Conclusions: For the first time, real-time target rotation has been accurately detected and adapted to during radiation delivery via DMLC tracking. The beam-target rotational alignment difference was mostly within 1 Degree-Sign . Dose distributions to fixed and actively

  12. An Adaptive Framework for Real-Time ECG Transmission in Mobile Environments

    PubMed Central

    2014-01-01

    Wireless electrocardiogram (ECG) monitoring involves the measurement of ECG signals and their timely transmission over wireless networks to remote healthcare professionals. However, fluctuations in wireless channel conditions pose quality-of-service challenges for real-time ECG monitoring services in a mobile environment. We present an adaptive framework for layered coding and transmission of ECG data that can cope with a time-varying wireless channel. The ECG is segmented into layers with differing importance with respect to the quality of the reconstructed signal. According to this observation, we have devised a simple and efficient real-time scheduling algorithm based on the earliest deadline first (EDF) policy, which decides the order of transmitting or retransmitting packets that contain ECG data at any given time for the delivery of scalable ECG data over a lossy channel. The algorithm takes into account the differing priorities of packets in each layer, which prevents the perceived quality of the reconstructed ECG signal from degrading abruptly as channel conditions worsen, while using the available bandwidth efficiently. Extensive simulations demonstrate this improvement in perceived quality. PMID:25097886

  13. Toward fast feature adaptation and localization for real-time face recognition systems

    NASA Astrophysics Data System (ADS)

    Zuo, Fei; de With, Peter H.

    2003-06-01

    In a home environment, video surveillance employing face detection and recognition is attractive for new applications. Facial feature (e.g. eyes and mouth) localization in the face is an essential task for face recognition because it constitutes an indispensable step for face geometry normalization. This paper presents a new and efficient feature localization approach for real-time personal surveillance applications with low-quality images. The proposed approach consists of three major steps: (1) self-adaptive iris tracing, which is preceded by a trace-point selection process with multiple initializations to overcome the local convergence problem, (2) eye structure verification using an eye template with limited deformation freedom, and (3) eye-pair selection based on a combination of metrics. We have tested our facial feature localization method on about 100 randomly selected face images from the AR database and 30 face images downloaded from the Internet. The results show that our approach achieves a correct detection rate of 96%. Since our eye-selection technique does not involve time-consuming deformation processes, it yields relatively fast processing. The proposed algorithm has been successfully applied to a real-time home video surveillance system and proven to be an effective and computationally efficient face normalization method preceding the face recognition.

  14. Real-time detection of generic objects using objectness estimation and locally adaptive regression kernels matching

    NASA Astrophysics Data System (ADS)

    Zheng, Zhihui; Gao, Lei; Xiao, Liping; Zhou, Bin; Gao, Shibo

    2015-12-01

    Our purpose is to develop a detection algorithm capable of searching for generic interest objects in real time without large training sets and long-time training stages. Instead of the classical sliding window object detection paradigm, we employ an objectness measure to produce a small set of candidate windows efficiently using Binarized Normed Gradients and a Laplacian of Gaussian-like filter. We then extract Locally Adaptive Regression Kernels (LARKs) as descriptors both from a model image and the candidate windows which measure the likeness of a pixel to its surroundings. Using a matrix cosine similarity measure, the algorithm yields a scalar resemblance map, indicating the likelihood of similarity between the model and the candidate windows. By employing nonparametric significance tests and non-maxima suppression, we detect the presence of objects similar to the given model. Experiments show that the proposed detection paradigm can automatically detect the presence, the number, as well as location of similar objects to the given model. The high quality and efficiency of our method make it suitable for real time multi-category object detection applications.

  15. Real-time optical imaging using quantum dot and related nanocrystals

    PubMed Central

    Kosaka, Nobuyuki; McCann, Thomas E; Mitsunaga, Makoto; Choyke, Peter L; Kobayashi, Hisataka

    2012-01-01

    Biomedical optical imaging is rapidly evolving because of its desirable features of rapid frame rates, high sensitivity, low cost, portability and lack of radiation. Quantum dots are attractive as imaging agents owing to their high brightness, and photo- and bio-stability. Here, the current status of in vitro and in vivo real-time optical imaging with quantum dots is reviewed. In addition, we consider related nanocrystals based on solid-state semiconductors, including upconverting nanoparticles and bioluminescence resonance energy transfer quantum dots. These particles can improve the signal-to-background ratio for real-time imaging largely by suppressing background signal. Although toxicity and biodistribution of quantum dots and their close relatives remain prime concerns for translation to human imaging, these agents have many desirable features that should be explored for medical purposes. PMID:20662647

  16. Real-time tissue differentiation based on optical emission spectroscopy for guided electrosurgical tumor resection

    PubMed Central

    Spether, Dominik; Scharpf, Marcus; Hennenlotter, Jörg; Schwentner, Christian; Neugebauer, Alexander; Nüßle, Daniela; Fischer, Klaus; Zappe, Hans; Stenzl, Arnulf; Fend, Falko; Seifert, Andreas; Enderle, Markus

    2015-01-01

    Complete surgical removal of cancer tissue with effective preservation of healthy tissue is one of the most important challenges in modern oncology. We present a method for real-time, in situ differentiation of tissue based on optical emission spectroscopy (OES) performed during electrosurgery not requiring any biomarkers, additional light sources or other excitation processes. The analysis of the optical emission spectra, enables the differentiation of healthy and tumorous tissue. By using multi-class support vector machine (SVM) algorithms, distinguishing between tumor types also seems to be possible. Due to its fast reaction time (0.05s) the method can be used for real-time navigation helping the surgeon achieve complete resection. The system’s easy realization has been proven by successful integration in a commercial electro surgical unit (ESU). In a first step the method was verified by using ex vivo tissue samples. The histological analysis confirmed, 95% of correctly classified tissue types. PMID:25909025

  17. Adaptive load-stand design for real-time HWIL JSOW missile control section characterization

    NASA Astrophysics Data System (ADS)

    Strauss, E. Paul

    1996-05-01

    The purpose of having dynamically adaptive load stand capability is to verify and monitor control section actuator performance under simulated free-flight aerodynamic load conditions in a Closed Loop Real Time HWIL environment. HWIL testing is a cost effective and risk reducing means of evaluating missile system prior to flight testing. This article develops methods of designing, analyzing, and testing of an extension spring driven load stand. Load stand spring natural and surging frequencies are evaluated. Nonlinear control section actuator anomalies are discussed in terms of load stand testing. Actuator time response data is examined under hinge moment and normal force loaded conditions. A design verification procedure was executed to provide a high degree of assurance that the load stand would perform as predicted by analytical methods.

  18. Real-time infrared gas detection based on an adaptive Savitzky-Golay algorithm

    NASA Astrophysics Data System (ADS)

    Li, Jingsong; Deng, Hao; Li, Pengfei; Yu, Benli

    2015-08-01

    Based on the Savitzky-Golay filter, we have developed in the present study a simple but robust method for real-time processing of tunable diode laser absorption spectroscopy (TDLAS) signals. Our method was developed to resolve the blindness of selecting the input filter parameters and to mitigate potential signal distortion induced in digital signal processing. Application of the developed adaptive Savitzky-Golay filter algorithm to the simulated and experimentally observed signals and comparison with the wavelet-based de-noising technique indicate that the newly developed method is effective in obtaining high-quality TDLAS data for a wide variety of applications including atmospheric environmental monitoring and industrial processing control.

  19. A stereoscopic movie player with real-time content adaptation to the display geometry

    NASA Astrophysics Data System (ADS)

    Duch"ne, Sylvain; Lambers, Martin; Devernay, Frédéric

    2012-03-01

    3D shape perception in a stereoscopic movie depends on several depth cues, including stereopsis. For a given content, the depth perceived from stereopsis highly depends on the camera setup as well as on the display size and distance. This can lead to disturbing depth distortions such as the cardboard effect or the puppet theater effect. As more and more stereoscopic 3D content is produced in 3D (feature movies, documentaries, sports broadcasts), a key point is to get the same 3D experience on any display. For this purpose, perceived depth distortions can be resolved by performing view synthesis. We propose a real time implementation of a stereoscopic player based on the open-source software Bino, which is able to adapt a stereoscopic movie to any display, based on user-provided camera and display parameters.

  20. Real-time optimal adaptation for planetary geometry and texture: 4-8 tile hierarchies.

    PubMed

    Hwa, Lok M; Duchaineau, Mark A; Joy, Kenneth I

    2005-01-01

    The real-time display of huge geometry and imagery databases involves view-dependent approximations, typically through the use of precomputed hierarchies that are selectively refined at runtime. A classic motivating problem is terrain visualization in which planetary databases involving billions of elevation and color values are displayed on PC graphics hardware at high frame rates. This paper introduces a new diamond data structure for the basic selective-refinement processing, which is a streamlined method of representing the well-known hierarchies of right triangles that have enjoyed much success in real-time, view-dependent terrain display. Regular-grid tiles are proposed as the payload data per diamond for both geometry and texture. The use of 4-8 grid refinement and coarsening schemes allows level-of-detail transitions that are twice as gradual as traditional quadtree-based hierarchies, as well as very high-quality low-pass filtering compared to subsampling-based hierarchies. An out-of-core storage organization is introduced based on Sierpinski indices per diamond, along with a tile preprocessing framework based on fine-to-coarse, same-level, and coarse-to-fine gathering operations. To attain optimal frame-to-frame coherence and processing-order priorities, dual split and merge queues are developed similar to the Realtime Optimally Adapting Meshes (ROAM) Algorithm, as well as an adaptation of the ROAM frustum culling technique. Example applications of lake-detection and procedural terrain generation demonstrate the flexibility of the tile processing framework. PMID:16138547

  1. Medical alert management: a real-time adaptive decision support tool to reduce alert fatigue.

    PubMed

    Lee, Eva K; Wu, Tsung-Lin; Senior, Tal; Jose, James

    2014-01-01

    With the adoption of electronic medical records (EMRs), drug safety alerts are increasingly recognized as valuable tools for reducing adverse drug events and improving patient safety. However, even with proper tuning of the EMR alert parameters, the volume of unfiltered alerts can be overwhelming to users. In this paper, we design an adaptive decision support tool in which past cognitive overriding decisions of users are learned, adapted and used for filtering actions to be performed on current alerts. The filters are designed and learned based on a moving time window, number of alerts, overriding rates, and monthly overriding fluctuations. Using alerts from two separate years to derive filters and test performance, predictive accuracy rates of 91.3%-100% are achieved. The moving time window works better than a static training approach. It allows continuous learning and capturing of the most recent decision characteristics and seasonal variations in drug usage. The decision support system facilitates filtering of non-essential alerts and adaptively learns critical alerts and highlights them prominently to catch providers' attention. The tool can be plugged into an existing EMR system as an add-on, allowing real-time decision support to users without interfering with existing EMR functionalities. By automatically filtering the alerts, the decision support tool mitigates alert fatigue and allows users to focus resources on potentially vital alerts, thus reducing the occurrence of adverse drug events. PMID:25954391

  2. a Real-Time Optical/digital Radon Space Image Processing System

    NASA Astrophysics Data System (ADS)

    Woolven, Steve

    A unique hybrid optical/digital general image processing system which potentially functions at real-time rates and performs analysis on low object-to-background contrast images in Radon space is investigated. The system is capable of some real-time functions which are invariant to object distortions. This research is presented in three stages: the development and analysis of the theory of Radon space, the hardware and software design and implementation of the working system, and the results achieved. This original system functions by using the forward Radon transform ^1, which is achieved by a front-end optical processor, followed by a digital processing subsystem operating in Radon space instead of the more familiar image space. The system works by converting the two dimensional image data into a series of one dimensional projections, and it is demonstrated that several digital image processing functions can potentially be performed faster on the projection data than on the original image data. Using the transform, it is shown that the system is theoretically capable of performing real-time two dimensional Fourier transforms and matched filtering operations. Also, this document presents and demonstrates a method of potential real-time object-moment analysis which allows objects to undergo distortions and continue to be recognized as the original object. It is shown that these moments can be calculated in Radon space using significantly less image data and fewer digital processing operations than in image space. The optical system is potentially capable of performing 6.04 times 10^{10 } operations per second on the two dimensional image data. ftn^1The Radon transform refers to a mathematical tomographic transform of image data from two dimensional image space to a one dimensional space (Radon space).

  3. Active learning of introductory optics: real-time physics labs, interactive lecture demonstrations and magic

    NASA Astrophysics Data System (ADS)

    Sokoloff, David R.

    2005-10-01

    Widespread physics education research has shown that most introductory physics students have difficulty learning essential optics concepts - even in the best of traditional courses, and that well-designed active learning approaches can remedy this problem. This mini-workshop and the associated poster session will provide direct experience with methods for promoting students' active involvement in the learning process in lecture and laboratory. Participants will have hands-on experience with activities from RealTime Physics labs and Interactive Lecture Demonstrations - a learning strategy for large (and small) lectures, including specially designed Optics Magic Tricks. The poster will provide more details on these highly effective curricula.

  4. Fabrication and characterization of a real-time optical fiber dosimeter probe

    NASA Astrophysics Data System (ADS)

    Croteau, André; Caron, Serge; Rink, Alexandra; Jaffray, David; Mermut, Ozzy

    2011-07-01

    There is a pressing need for a low cost, passive optical fiber dosimeter probe for use in real-time monitoring of radiation dose delivered to clinical radiation therapy patients. An optical fiber probe using radiochromic material has been designed and fabricated based on the deposition of a radiochromic thin film on a dielectric mirror. Measurements of the net optical density vs. time before, during, and after irradiation at a rate of 500 cGy/minute to a total dose of 5 Gy were performed. Net optical densities increased from 0.2 to 2.0 for radiochromic thin film thicknesses of 2 to 20 μm, respectively. An improved optical fiber probe fabrication method is presented.

  5. Real-time detection of moving objects from moving vehicles using dense stereo and optical flow

    NASA Technical Reports Server (NTRS)

    Talukder, Ashit; Matthies, Larry

    2004-01-01

    Dynamic scene perception is very important for autonomous vehicles operating around other moving vehicles and humans. Most work on real-time object tracking from moving platforms has used sparse features or assumed flat scene structures. We have recently extended a real-time, dense stereo system to include real-time, dense optical flow, enabling more comprehensive dynamic scene analysis. We describe algorithms to robustly estimate 6-DOF robot egomotion in the presence of moving objects using dense flow and dense stereo. We then use dense stereo and egomotion estimates to identity other moving objects while the robot itself is moving. We present results showing accurate egomotion estimation and detection of moving people and vehicles under general 6-DOF motion of the robot and independently moving objects. The system runs at 18.3 Hz on a 1.4 GHz Pentium M laptop, computing 160x120 disparity maps and optical flow fields, egomotion, and moving object segmentation. We believe this is a significant step toward general unconstrained dynamic scene analysis for mobile robots, as well as for improved position estimation where GPS is unavailable.

  6. Real-time locating and speed measurement of fibre fuse using optical frequency-domain reflectometry.

    PubMed

    Jiang, Shoulin; Ma, Lin; Fan, Xinyu; Wang, Bin; He, Zuyuan

    2016-01-01

    We propose and experimentally demonstrate real-time locating and speed measurement of fibre fuse by analysing the Doppler shift of reflected light using optical frequency-domain reflectometry (OFDR). Our method can detect the start of a fibre fuse within 200 ms which is equivalent to a propagation distance of about 10 cm in standard single-mode fibre. We successfully measured instantaneous speed of propagating fibre fuses and observed their subtle fluctuation owing to the laser power instability. The resolution achieved for speed measurement in our demonstration is 1 × 10(-3) m/s. We studied the fibre fuse propagation speed dependence on the launched power in different fibres. Our method is promising for both real time fibre fuse monitoring and future studies on its propagation and termination. PMID:27146550

  7. Real-time locating and speed measurement of fibre fuse using optical frequency-domain reflectometry

    NASA Astrophysics Data System (ADS)

    Jiang, Shoulin; Ma, Lin; Fan, Xinyu; Wang, Bin; He, Zuyuan

    2016-05-01

    We propose and experimentally demonstrate real-time locating and speed measurement of fibre fuse by analysing the Doppler shift of reflected light using optical frequency-domain reflectometry (OFDR). Our method can detect the start of a fibre fuse within 200 ms which is equivalent to a propagation distance of about 10 cm in standard single-mode fibre. We successfully measured instantaneous speed of propagating fibre fuses and observed their subtle fluctuation owing to the laser power instability. The resolution achieved for speed measurement in our demonstration is 1 × 10‑3 m/s. We studied the fibre fuse propagation speed dependence on the launched power in different fibres. Our method is promising for both real time fibre fuse monitoring and future studies on its propagation and termination.

  8. The real-time monitoring surface figure of optical elements in continuous polishing

    NASA Astrophysics Data System (ADS)

    Chen, Jun; Xu, Xueke; Wei, Chaoyang; Gu, Jianxun; Dun, Aihuan; Shao, Jianda

    2014-08-01

    Continuous ring polishing is the key process in large aperture optical elements. The surface figure of polishing pad is inferred by the offline testing surface figure of workpiece. The defects, low processing efficiency and uncertainty processing time in traditional continuous polishing, the real-time monitoring method of polishing is proposed. The realtime monitoring system is set up based on the computer, the dynamic interferometer, a beam expanding system and a beam reflecting system. There are a workpiece and a glass monitoring plate placing in same ring. The surface figure of workpiece, monitored by the monitoring plate, synchronize with the surface of glass monitoring plate in Peak-Valley (PV) and POWER. The new method with simple structure is fast measuring and judgmental directly to the changes of surface figures. The results of real-time monitoring and surface figure converging on the workpiece are valid for continuous polishing through experimental validation.

  9. Real-time locating and speed measurement of fibre fuse using optical frequency-domain reflectometry

    PubMed Central

    Jiang, Shoulin; Ma, Lin; Fan, Xinyu; Wang, Bin; He, Zuyuan

    2016-01-01

    We propose and experimentally demonstrate real-time locating and speed measurement of fibre fuse by analysing the Doppler shift of reflected light using optical frequency-domain reflectometry (OFDR). Our method can detect the start of a fibre fuse within 200 ms which is equivalent to a propagation distance of about 10 cm in standard single-mode fibre. We successfully measured instantaneous speed of propagating fibre fuses and observed their subtle fluctuation owing to the laser power instability. The resolution achieved for speed measurement in our demonstration is 1 × 10−3 m/s. We studied the fibre fuse propagation speed dependence on the launched power in different fibres. Our method is promising for both real time fibre fuse monitoring and future studies on its propagation and termination. PMID:27146550

  10. Real-time optical diagnosis of gastric cancer with serosal invasion using multiphoton imaging

    PubMed Central

    Yan, Jun; Zheng, Yu; Zheng, Xiaoling; Liu, Zhangyuanzhu; Liu, Wenju; Chen, Dexin; Dong, Xiaoyu; Li, Kai; Liu, Xiumin; Chen, Gang; Lu, Jianping; Chen, Jianxin; Zhuo, Shuangmu; Li, Guoxin

    2016-01-01

    A real-time optical biopsy, which could determine tissue histopathology, would be of extraordinary benefit to staging laparoscopy for gastric cancer with serosal invasion (T4) that requires downstage treatment. We investigated the feasibility of using multiphoton imaging to perform a real-time optical diagnosis of gastric cancer with or without serosal invasion. First, a pilot study was performed to establish the optical diagnostic features of gastric cancer with or without serosal invasion using multiphoton imaging compared with hematoxylin-eosin staining and Masson’s trichrome staining. Second, a blinded study was performed to compare the diagnostic sensitivity, specificity, and accuracy of multiphoton imaging and endoscopic ultrasonography (EUS) for T4 gastric cancer. In the pilot study, multiphoton imaging revealed collagen loss and degradation and cellular and nuclear pleomorphism in gastric cancer with serosal invasion. The collagen content in gastric cancer with or without serosal invasion was 0.36 ± 0.18 and 0.79 ± 0.16 (p < 0.001), respectively. In the blinded study, the sensitivity, specificity, and accuracy of EUS and multiphoton imaging for T4 gastric cancer were 70% and 90% (p = 0.029), 66.67% and 96.67% (p = 0.003), and 68.33% and 93.33% (p = 0.001), respectively. It is feasible to use multiphoton imaging to make a real-time optical diagnosis of gastric cancer with or without serosal invasion. PMID:27499365

  11. The RAPTOR experiment: a system for monitoring the optical sky in real time

    NASA Astrophysics Data System (ADS)

    Vestrand, W. T.; Borozdin, Konstantin N.; Brumby, Steven P.; Casperson, Donald E.; Fenimore, Edward E.; Galassi, Mark C.; McGowan, Katherine; Perkins, Simon J.; Priedhorsky, William C.; Starr, Daniel; White, Robert; Wozniak, Przemek; Wren, James A.

    2002-11-01

    The Rapid Telescopes for Optical Response (RAPTOR) experiment is a spatially distributed system of autonomous robotic telescopes that is designed to monitor the sky for optical transients. The core of the ystem is composed of two telescope arrays, separated by 38 kilometers, that stereoscopically view the same 1500 square-degree field with a wide-field imaging array and a central 4 square-degree field with a more sensitive narrow-field ``fovea" imager. Coupled to each telescope array is a real-time data analysis pipeline that is designed to identify interesting transients on timescales of seconds and, when a celestial transient is identified, to command the rapidly slewing robotic mounts to point the narrow-field ``fovea'' imagers at the transient. The two narrow-field telescopes then image the transient with higher spatial resolution and at a faster cadence to gather light curve information. Each ``fovea" camera also images the transient through a different filter to provide color information. This stereoscopic monitoring array is supplemented by a rapidly slewing telescope with a low resolution spectrograph for follow-up observations of transients and a sky patrol telescope that nightly monitors about 10,000 square-degrees for variations, with timescales of a day or longer, to a depth about 100 times fainter. In addition to searching for fast transients, we will use the data stream from RAPTOR as a real-time sentinel for recognizing important variations in known sources. All of the data will be publically released through a virtual observatory called SkyDOT (Sky Database for Objects in the Time Domain) that we are developing for studying variability of the optical sky. Altogether, the RAPTOR project aims to construct a new type of system for discovery in optical astronomy---one that explores the time domain by "mining the sky in real time".

  12. Real-time and static in vivo ophthalmic imaging by spectral optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Wojtkowski, Maciej; Bajraszewski, Tomasz; Targowski, Piotr; Kowalczyk, Andrzej

    2004-07-01

    Fast Spectral Optical Coherence Tomography (SOCT) technique is used to perform cross sectional and three-dimensional ophthalmic images. Static, real-time and 3-D in vivo images of the human cornea, lens, iris, corneo-scleral junction, retinal layers, optic disc and macula lutea are presented. The ophthalmic application of SOCT is promising because this technique ensures fast acquisition with relatively low optical power of incident light. All demonstrated images are obtained with the aid of SOCT instrument, which was constructed in the optical laboratory of medical physics group at Nicolaus Copernicus University (Torun, Poland). What is to our knowledge there are the first good quality (>90dB sensitivity) ophthalmic OCT images obtained by technique, which is different than time domain OCT.

  13. Real-time endoscopic oxygenation imaging using single snapshot of optical properties (SSOP) imaging (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Angelo, Joseph P.; van de Giessen, Martijn; Gioux, Sylvain

    2016-03-01

    With 50% of all interventional procedures in the US being minimally invasive, there is a need for objective tools to help guide surgeons in this challenging environment. Tissue oxygenation is a useful biomarker of tissue viability and suitable for surgical guidance. Here we present our efforts to perform real-time quantitative optical imaging through a rigid endoscope using Single Snapshot of Optical Properties (SSOP) imaging. In particular, in this work we introduce for the first time 3 dimensionally-corrected dual wavelength optical properties imaging using SSOP through an endoscope, allowing accurate oxygenation maps to be obtained on tissue simulating phantoms and in vivo samples. We compared the results with state-of-the-art wide-field spatial frequency domain imaging (SFDI). Overall, results from the novel endoscopic imaging system agreed within 10% in absorption, reduced scattering, and oxygenation. Moreover, we introduce here real-time, video-rate quantitative optical imaging with 3D profile correction through an endoscope. These results demonstrate the potential of endoscopic SSOP as an objective surgical guidance tool for the clinic.

  14. Bifunctional electro-optical nanoprobe to real-time detect local biochemical processes in single cells.

    PubMed

    Zheng, Xin Ting; Hu, Weihua; Wang, Houxiao; Yang, Hongbin; Zhou, Wei; Li, Chang Ming

    2011-07-15

    A bifunctional electro-optical nanoprobe with integrated nanoring electrode and optical nanotip was fabricated and investigated to simultaneously detect both electrical and optical signals in real-time with high spatial resolution. Concurrent measurements of the oxidant generation and the intracellular antioxidant levels in single cells correlate the stronger oxidant generation with an altered initial antioxidant response in the breast cancer cells in comparison to the normal ones suggesting that the cell malignancy is associated with the strength of oxidative stress, and the higher antioxidant level may be the cause of the drug resistance. While the optical detection indicates the fluctuation of the intracellular redox homeostasis, the chronoamperometric signals allow quantitative real-time detection of the H₂O₂ release and decay. Furthermore, the nanoscale probe enables localized simultaneous detections thus discovering that activated enzymes responsible for the oxidative stress target at specific membrane regions. This method promises applications in study of the dynamics of important physiological processes, and provides the opportunity to unravel the interplay of various signaling pathways. PMID:21632233

  15. Real-time Fourier transformation of lightwave spectra and application in optical reflectometry.

    PubMed

    Malacarne, Antonio; Park, Yongwoo; Li, Ming; LaRochelle, Sophie; Azaña, José

    2015-12-14

    We propose and experimentally demonstrate a fiber-optics scheme for real-time analog Fourier transform (FT) of a lightwave energy spectrum, such that the output signal maps the FT of the spectrum of interest along the time axis. This scheme avoids the need for analog-to-digital conversion and subsequent digital signal post-processing of the photo-detected spectrum, thus being capable of providing the desired FT processing directly in the optical domain at megahertz update rates. The proposed concept is particularly attractive for applications requiring FT analysis of optical spectra, such as in many optical Fourier-domain reflectrometry (OFDR), interferometry, spectroscopy and sensing systems. Examples are reported to illustrate the use of the method for real-time OFDR, where the target axial-line profile is directly observed in a single-shot oscilloscope trace, similarly to a time-of-flight measurement, but with a resolution and depth of range dictated by the underlying interferometry scheme. PMID:26699041

  16. Scalable digital spatial light modulator-micromesh heterostructures for real time wave optical applications.

    PubMed

    Jeong, Hoon; Choi, Jaewu

    2014-09-22

    For large-scale real time wave optical applications, we propose and demonstrate scalable simple digital spatial light modulator (SLM)-micromesh (μM) heterostructures, which fully harness ubiquitous well developed consumer information displays for real time large-scale SLMs and advanced patterning technologies for promoting the wave optical properties of SLMs of any size. Weakly diffractive projection mode large-scale SLMs with poor demultiplexity are transformed to highly diffractive mode heterostructures with fine patterned micromeshes as efficient demultiplexers or wave optical promoters. As a result, diffraction efficiency, diffraction angle, demultiplexity, multiplexity, reconstructed image quality and numbers of visibly reconstructed images largely increase even though the pixel pitches of the employed SLMs are many orders of magnitude larger than the wavelength of the illuminating light. The approach shown in this study can be applicable even for any sized weakly diffractive SLMs, and can simultaneously increase the effective spatial bandwidth and the physical dimension required for their wave optical applications. This can't be achieved by presently available SLMs alone. PMID:25321757

  17. Pupil Tracking for Real-Time Motion Corrected Anterior Segment Optical Coherence Tomography.

    PubMed

    Carrasco-Zevallos, Oscar M; Nankivil, Derek; Viehland, Christian; Keller, Brenton; Izatt, Joseph A

    2016-01-01

    Volumetric acquisition with anterior segment optical coherence tomography (ASOCT) is necessary to obtain accurate representations of the tissue structure and to account for asymmetries of the anterior eye anatomy. Additionally, recent interest in imaging of anterior segment vasculature and aqueous humor flow resulted in application of OCT angiography techniques to generate en face and 3D micro-vasculature maps of the anterior segment. Unfortunately, ASOCT structural and vasculature imaging systems do not capture volumes instantaneously and are subject to motion artifacts due to involuntary eye motion that may hinder their accuracy and repeatability. Several groups have demonstrated real-time tracking for motion-compensated in vivo OCT retinal imaging, but these techniques are not applicable in the anterior segment. In this work, we demonstrate a simple and low-cost pupil tracking system integrated into a custom swept-source OCT system for real-time motion-compensated anterior segment volumetric imaging. Pupil oculography hardware coaxial with the swept-source OCT system enabled fast detection and tracking of the pupil centroid. The pupil tracking ASOCT system with a field of view of 15 x 15 mm achieved diffraction-limited imaging over a lateral tracking range of +/- 2.5 mm and was able to correct eye motion at up to 22 Hz. Pupil tracking ASOCT offers a novel real-time motion compensation approach that may facilitate accurate and reproducible anterior segment imaging. PMID:27574800

  18. Pupil Tracking for Real-Time Motion Corrected Anterior Segment Optical Coherence Tomography

    PubMed Central

    Carrasco-Zevallos, Oscar M.; Nankivil, Derek; Viehland, Christian; Keller, Brenton; Izatt, Joseph A.

    2016-01-01

    Volumetric acquisition with anterior segment optical coherence tomography (ASOCT) is necessary to obtain accurate representations of the tissue structure and to account for asymmetries of the anterior eye anatomy. Additionally, recent interest in imaging of anterior segment vasculature and aqueous humor flow resulted in application of OCT angiography techniques to generate en face and 3D micro-vasculature maps of the anterior segment. Unfortunately, ASOCT structural and vasculature imaging systems do not capture volumes instantaneously and are subject to motion artifacts due to involuntary eye motion that may hinder their accuracy and repeatability. Several groups have demonstrated real-time tracking for motion-compensated in vivo OCT retinal imaging, but these techniques are not applicable in the anterior segment. In this work, we demonstrate a simple and low-cost pupil tracking system integrated into a custom swept-source OCT system for real-time motion-compensated anterior segment volumetric imaging. Pupil oculography hardware coaxial with the swept-source OCT system enabled fast detection and tracking of the pupil centroid. The pupil tracking ASOCT system with a field of view of 15 x 15 mm achieved diffraction-limited imaging over a lateral tracking range of +/- 2.5 mm and was able to correct eye motion at up to 22 Hz. Pupil tracking ASOCT offers a novel real-time motion compensation approach that may facilitate accurate and reproducible anterior segment imaging. PMID:27574800

  19. Real-Time THz Imaging Using Full-Field Electro-Optic Sampling

    NASA Astrophysics Data System (ADS)

    Ayesheshim, A.; Bushfield, I.; Hegmann, F. A.

    2010-03-01

    Real time terahertz imaging offers diverse opportunities and applications for non-destructive imaging applications [1,2]. In this paper, we demonstrate real-time THz imaging of still, moving, and concealed objects. Using a Ti: sapphire amplifier laser system, a THz beam is generated and detected via optical rectification and EO sampling respectively using [110] ZnTe wafers. Real time THz video rate imaging of metal objects and dripping water within a cardboard cylinder are clearly seen by an 8-bit grayscale CCD camera. The ring-like temporal and spatial intensity distribution of the various frequency components of the THz signal on the focal plane is also studied. To improve SNR, we use frame averaging and dynamic subtraction methods [3]. [4pt] [1] B .B. Hu and M. C. Nuss, Opt.Lett. 20, 1716(1995). [0pt] [2] K.Kawase, Y.Ogawa, Y.Watanabe, Opt. Express 11, 2546(2003). [0pt] [3] Z.Jiang, X.G.Xu, and X. -C. Zhang, Appl.Opt.39, 2982-2987(2000).

  20. A New Approach to Interference Excision in Radio Astronomy: Real-Time Adaptive Cancellation

    NASA Astrophysics Data System (ADS)

    Barnbaum, Cecilia; Bradley, Richard F.

    1998-11-01

    Every year, an increasing amount of radio-frequency (RF) spectrum in the VHF, UHF, and microwave bands is being utilized to support new commercial and military ventures, and all have the potential to interfere with radio astronomy observations. Such services already cause problems for radio astronomy even in very remote observing sites, and the potential for this form of light pollution to grow is alarming. Preventive measures to eliminate interference through FCC legislation and ITU agreements can be effective; however, many times this approach is inadequate and interference excision at the receiver is necessary. Conventional techniques such as RF filters, RF shielding, and postprocessing of data have been only somewhat successful, but none has been sufficient. Adaptive interference cancellation is a real-time approach to interference excision that has not been used before in radio astronomy. We describe here, for the first time, adaptive interference cancellation in the context of radio astronomy instrumentation, and we present initial results for our prototype receiver. In the 1960s, analog adaptive interference cancelers were developed that obtain a high degree of cancellation in problems of radio communications and radar. However, analog systems lack the dynamic range, noised performance, and versatility required by radio astronomy. The concept of digital adaptive interference cancellation was introduced in the mid-1960s as a way to reduce unwanted noise in low-frequency (audio) systems. Examples of such systems include the canceling of maternal ECG in fetal electrocardiography and the reduction of engine noise in the passenger compartments of automobiles. These audio-frequency applications require bandwidths of only a few tens of kilohertz. Only recently has high-speed digital filter technology made high dynamic range adaptive canceling possible in a bandwidth as large as a few megahertz, finally opening the door to application in radio astronomy. We have

  1. Evaluating real-time image reconstruction in diffuse optical tomography using physiologically realistic test data

    PubMed Central

    Brigadoi, Sabrina; Powell, Samuel; Cooper, Robert J.; Dempsey, Laura A.; Arridge, Simon; Everdell, Nick; Hebden, Jeremy; Gibson, Adam P.

    2015-01-01

    In diffuse optical tomography (DOT), real-time image reconstruction of oxy- and deoxy-haemoglobin changes occurring in the brain could give valuable information in clinical care settings. Although non-linear reconstruction techniques could provide more accurate results, their computational burden makes them unsuitable for real-time applications. Linear techniques can be employed under the assumption that the expected change in absorption is small. Several approaches exist, differing primarily in their handling of regularization and the noise statistics. In real experiments, it is impossible to compute the true noise statistics, because of the presence of physiological oscillations in the measured data. This is even more critical in real-time applications, where no off-line filtering and averaging can be performed to reduce the noise level. Therefore, many studies substitute the noise covariance matrix with the identity matrix. In this paper, we examined two questions: does using the noise model with realistic, imperfect data yield an improvement in image quality compared to using the identity matrix; and what is the difference in quality between online and offline reconstructions. Bespoke test data were created using a novel process through which simulated changes in absorption were added to real resting-state DOT data. A realistic multi-layer head model was used as the geometry for the reconstruction. Results validated our assumptions, highlighting the validity of computing the noise statistics from the measured data for online image reconstruction, which was performed at 2 Hz. Our results can be directly extended to a real application where real-time imaging is required. PMID:26713189

  2. Real time assessment of RF cardiac tissue ablation with optical spectroscopy

    SciTech Connect

    Demos, S G; Sharareh, S

    2008-03-20

    An optical spectroscopy approach is demonstrated allowing for critical parameters during RF ablation of cardiac tissue to be evaluated in real time. The method is based on incorporating in a typical ablation catheter transmitting and receiving fibers that terminate at the tip of the catheter. By analyzing the spectral characteristics of the NIR diffusely reflected light, information is obtained on such parameters as, catheter-tissue proximity, lesion formation, depth of penetration of the lesion, formation of char during the ablation, formation of coagulum around the ablation site, differentiation of ablated from healthy tissue, and recognition of micro-bubble formation in the tissue.

  3. Real-time in vivo imaging of dental tissue by means of optical coherence tomography (OCT)

    NASA Astrophysics Data System (ADS)

    Brandenburg, Roland; Haller, Bernd; Hauger, Christoph

    2003-11-01

    We have carried out real-time in vivo and in vitro imaging of human dental tissue in a clinical setting by means of optical coherence tomography (OCT). We have used a compact, commercial prototype OCT system applying for the first time a surgical microscope as a beam delivery system for investigations of dental tissue. We have imaged demineralised tissue, caries lesions, restored teeth and oral mucosa and demonstrate the detection of changes in tissue microstructure. We discuss the details of this system and its potential and limitations with respect to dental applications.

  4. Miniature real-time intraoperative forward-imaging optical coherence tomography probe

    PubMed Central

    Joos, Karen M.; Shen, Jin-Hui

    2013-01-01

    Optical coherence tomography (OCT) has a tremendous global impact upon the ability to diagnose, treat, and monitor eye diseases. A miniature 25-gauge forward-imaging OCT probe with a disposable tip was developed for real-time intraoperative ocular imaging of posterior pole and peripheral structures to improve vitreoretinal surgery. The scanning range was 2 mm when the probe tip was held 3-4 mm from the tissue surface. The axial resolution was 4-6 µm and the lateral resolution was 25-35 µm. The probe was used to image cellophane tape and multiple ocular structures. PMID:24009997

  5. Real-time optical multiple object recognition and tracking system and method

    NASA Technical Reports Server (NTRS)

    Chao, Tien-Hsin (Inventor); Liu, Hua Kuang (Inventor)

    1987-01-01

    The invention relates to an apparatus and associated methods for the optical recognition and tracking of multiple objects in real time. Multiple point spatial filters are employed that pre-define the objects to be recognized at run-time. The system takes the basic technology of a Vander Lugt filter and adds a hololens. The technique replaces time, space and cost-intensive digital techniques. In place of multiple objects, the system can also recognize multiple orientations of a single object. This later capability has potential for space applications where space and weight are at a premium.

  6. Real-time gamma dosimetry using PMMA optical fibres for applications in the sterilization industry

    NASA Astrophysics Data System (ADS)

    O'Keeffe, S.; Fernandez Fernandez, A.; Fitzpatrick, C.; Brichard, B.; Lewis, E.

    2007-10-01

    The use of polymethylmethacrylate (PMMA)-based plastic optical fibre as an intrinsic real-time gamma dosimeter is investigated. The radiation-induced attenuation of the fibres is monitored in situ during the course of irradiation. The PMMA fibre exhibited a linear radiation- induced attenuation response at various wavelengths for a dose range of 50 Gy to 50 kGy. The sensitivity, ranging from 0.4 dBm-1 kGy-1 to 0.03 dBm-1 kGy-1, is wavelength dependent, with high sensitivity at the lower wavelengths.

  7. Real-time, profile-corrected single snapshot imaging of optical properties.

    PubMed

    van de Giessen, Martijn; Angelo, Joseph P; Gioux, Sylvain

    2015-10-01

    A novel acquisition and processing method that enables real-time, single snapshot of optical properties (SSOP) and 3-dimensional (3D) profile measurements in the spatial frequency domain is described. This method makes use of a dual sinusoidal wave projection pattern permitting to extract the DC and AC components in the frequency domain to recover optical properties as well as the phase for measuring the 3D profile. In this method, the 3D profile is used to correct for the effect of sample's height and angle and directly obtain profile-corrected absorption and reduced scattering maps from a single acquired image. In this manuscript, the 3D-SSOP method is described and validated on tissue-mimicking phantoms as well as in vivo, in comparison with the standard profile-corrected SFDI (3D-SFDI) method. On average, in comparison with 3D-SFDI method, the 3D-SSOP method allows to recover the profile within 1.2mm and profile-corrected optical properties within 12% for absorption and 6% for reduced scattering over a large field-of-view and in real-time. PMID:26504653

  8. Real-time, profile-corrected single snapshot imaging of optical properties

    PubMed Central

    van de Giessen, Martijn; Angelo, Joseph P.; Gioux, Sylvain

    2015-01-01

    A novel acquisition and processing method that enables real-time, single snapshot of optical properties (SSOP) and 3-dimensional (3D) profile measurements in the spatial frequency domain is described. This method makes use of a dual sinusoidal wave projection pattern permitting to extract the DC and AC components in the frequency domain to recover optical properties as well as the phase for measuring the 3D profile. In this method, the 3D profile is used to correct for the effect of sample’s height and angle and directly obtain profile-corrected absorption and reduced scattering maps from a single acquired image. In this manuscript, the 3D-SSOP method is described and validated on tissue-mimicking phantoms as well as in vivo, in comparison with the standard profile-corrected SFDI (3D-SFDI) method. On average, in comparison with 3D-SFDI method, the 3D-SSOP method allows to recover the profile within 1.2mm and profile-corrected optical properties within 12% for absorption and 6% for reduced scattering over a large field-of-view and in real-time. PMID:26504653

  9. Optical Response of Warm Dense Matter Using Real-Time Electron Dynamics

    NASA Astrophysics Data System (ADS)

    Baczewski, Andrew; Shulenburger, Luke; Desjarlais, Michael; Magyar, Rudolph

    2014-03-01

    The extreme temperatures and solid-like densities in warm dense matter present a unique challenge for theory, wherein neither conventional models from condensed matter nor plasma physics capture all of the relevant phenomenology. While Kubo-Greenwood DFT calculations have proven capable of reproducing optical properties of WDM, they require a significant number of virtual orbitals to reach convergence due to their perturbative nature. Real-time TDDFT presents a complementary framework with a number of computationally favorable properties, including reduced cost complexity and better scalability, and has been used to reproduce the optical response of finite and ordered extended systems. We will describe the use of Ehrenfest-TDDFT to evolve coupled electron-nuclear dynamics in WDM systems, and the subsequent evaluation of optical response functions from the real-time electron dynamics. The advantages and disadvantages of this approach will be discussed relative to the current state-of-the-art. Sandia National Laboratories is a multi-program laboratory managed and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Corporation, for the U.S. Department of Energy's National Security Administration under contract DE-AC04-94AL85000.

  10. Identification of complex scattered signals with a fast real-time hybrid electro-optical correlator

    NASA Astrophysics Data System (ADS)

    Majumdar, Arun K.; Sandomirsky, Sergey

    1997-10-01

    The goal of this work was to develop a fast optical correlator for automatic real-time target recognition. The tremendous importance of optical correlators for military and civilian applications was recognized recently and approved by a US conference committee of senators nd representatives. This publication presents the experimental results of detecting and identifying complex scattered signals by using an innovative, hybrid electro-optical correlator. Our technique is based on achieving optical correlation by utilizing state-of-the-art devices: time delay integration, charge coupled devices, liquid crystal displays, and electronically controllable light sources. Results of the experiment with our optical correlator, performed with simulated sonar signals with a center frequency of 100 kHz and duration of 8 to 512 pulses, show the possibility of recognizing a Doppler shift of 20 Hz. This Doppler shift corresponds to a target velocity of 20.7 m/sec. Simulation results indicate that we can achieve significant correlation for a noisy signal by using appropriate signal length. Our experiments demonstrate that we can perform approximately 1010 multiply accumulate operations per second with the high parallel optical corrector, compared to approximately 106 multiply accumulate operations per second using a Pentium 133 MHz personal computer. This new optical correlation scheme can provide solutions for overcoming the inherent shortcomings attributable to the low dynamic range of CCD, and the problem of compatibility caused by different pixel patterns between LCD and CCD by making use of high-quality optics and modern means of achieving uniform illumination.

  11. Adaptive neuro-fuzzy inference system for real-time monitoring of integrated-constructed wetlands.

    PubMed

    Dzakpasu, Mawuli; Scholz, Miklas; McCarthy, Valerie; Jordan, Siobhán; Sani, Abdulkadir

    2015-01-01

    Monitoring large-scale treatment wetlands is costly and time-consuming, but required by regulators. Some analytical results are available only after 5 days or even longer. Thus, adaptive neuro-fuzzy inference system (ANFIS) models were developed to predict the effluent concentrations of 5-day biochemical oxygen demand (BOD5) and NH4-N from a full-scale integrated constructed wetland (ICW) treating domestic wastewater. The ANFIS models were developed and validated with a 4-year data set from the ICW system. Cost-effective, quicker and easier to measure variables were selected as the possible predictors based on their goodness of correlation with the outputs. A self-organizing neural network was applied to extract the most relevant input variables from all the possible input variables. Fuzzy subtractive clustering was used to identify the architecture of the ANFIS models and to optimize fuzzy rules, overall, improving the network performance. According to the findings, ANFIS could predict the effluent quality variation quite strongly. Effluent BOD5 and NH4-N concentrations were predicted relatively accurately by other effluent water quality parameters, which can be measured within a few hours. The simulated effluent BOD5 and NH4-N concentrations well fitted the measured concentrations, which was also supported by relatively low mean squared error. Thus, ANFIS can be useful for real-time monitoring and control of ICW systems. PMID:25607665

  12. Motion-adapted catheter navigation with real-time instantiation and improved visualisation

    PubMed Central

    Kwok, Ka-Wai; Wang, Lichao; Riga, Celia; Bicknell, Colin; Cheshire, Nicholas; Yang, Guang-Zhong

    2014-01-01

    The improvements to catheter manipulation by the use of robot-assisted catheter navigation for endovascular procedures include increased precision, stability of motion and operator comfort. However, navigation through the vasculature under fluoroscopic guidance is still challenging, mostly due to physiological motion and when tortuous vessels are involved. In this paper, we propose a motion-adaptive catheter navigation scheme based on shape modelling to compensate for these dynamic effects, permitting predictive and dynamic navigations. This allows for timed manipulations synchronised with the vascular motion. The technical contribution of the paper includes the following two aspects. Firstly, a dynamic shape modelling and real-time instantiation scheme based on sparse data obtained intra-operatively is proposed for improved visualisation of the 3D vasculature during endovascular intervention. Secondly, a reconstructed frontal view from the catheter tip using the derived dynamic model is used as an interventional aid to user guidance. To demonstrate the practical value of the proposed framework, a simulated aortic branch cannulation procedure is used with detailed user validation to demonstrate the improvement in navigation quality and efficiency. PMID:24744817

  13. Refinement and evaluation of helicopter real-time self-adaptive active vibration controller algorithms

    NASA Technical Reports Server (NTRS)

    Davis, M. W.

    1984-01-01

    A Real-Time Self-Adaptive (RTSA) active vibration controller was used as the framework in developing a computer program for a generic controller that can be used to alleviate helicopter vibration. Based upon on-line identification of system parameters, the generic controller minimizes vibration in the fuselage by closed-loop implementation of higher harmonic control in the main rotor system. The new generic controller incorporates a set of improved algorithms that gives the capability to readily define many different configurations by selecting one of three different controller types (deterministic, cautious, and dual), one of two linear system models (local and global), and one or more of several methods of applying limits on control inputs (external and/or internal limits on higher harmonic pitch amplitude and rate). A helicopter rotor simulation analysis was used to evaluate the algorithms associated with the alternative controller types as applied to the four-bladed H-34 rotor mounted on the NASA Ames Rotor Test Apparatus (RTA) which represents the fuselage. After proper tuning all three controllers provide more effective vibration reduction and converge more quickly and smoothly with smaller control inputs than the initial RTSA controller (deterministic with external pitch-rate limiting). It is demonstrated that internal limiting of the control inputs a significantly improves the overall performance of the deterministic controller.

  14. Real-Time Reconfigurable Adaptive Speech Recognition Command and Control Apparatus and Method

    NASA Technical Reports Server (NTRS)

    Salazar, George A. (Inventor); Haynes, Dena S. (Inventor); Sommers, Marc J. (Inventor)

    1998-01-01

    An adaptive speech recognition and control system and method for controlling various mechanisms and systems in response to spoken instructions and in which spoken commands are effective to direct the system into appropriate memory nodes, and to respective appropriate memory templates corresponding to the voiced command is discussed. Spoken commands from any of a group of operators for which the system is trained may be identified, and voice templates are updated as required in response to changes in pronunciation and voice characteristics over time of any of the operators for which the system is trained. Provisions are made for both near-real-time retraining of the system with respect to individual terms which are determined not be positively identified, and for an overall system training and updating process in which recognition of each command and vocabulary term is checked, and in which the memory templates are retrained if necessary for respective commands or vocabulary terms with respect to an operator currently using the system. In one embodiment, the system includes input circuitry connected to a microphone and including signal processing and control sections for sensing the level of vocabulary recognition over a given period and, if recognition performance falls below a given level, processing audio-derived signals for enhancing recognition performance of the system.

  15. Design of the first optical system for real-time tomographic holography (RTTH)

    NASA Astrophysics Data System (ADS)

    Galeotti, John M.; Siegel, Mel; Rallison, Richard D.; Stetten, George

    2008-08-01

    The design of the first Real-Time-Tomographic-Holography (RTTH) optical system for augmented-reality applications is presented. RTTH places a viewpoint-independent real-time (RT) virtual image (VI) of an object into its actual location, enabling natural hand-eye coordination to guide invasive procedures, without requiring tracking or a head-mounted device. The VI is viewed through a narrow-band Holographic Optical Element (HOE) with built-in power that generates the largest possible near-field, in-situ VI from a small display chip without noticeable parallax error or obscuring direct view of the physical world. Rigidly fixed upon a medical-ultrasound probe, RTTH could show the scan in its actual location inside the patient, because the VI would move with the probe. We designed the image source along with the system-optics, allowing us to ignore both planer geometric distortions and field curvature, respectively compensated by using RT pre-processing software and attaching a custom-surfaced fiber-optic-faceplate (FOFP) to our image source. Focus in our fast, non-axial system was achieved by placing correcting lenses near the FOFP and custom-optically-fabricating our volume-phase HOE using a recording beam that was specially shaped by extra lenses. By simultaneously simulating and optimizing the system's playback performance across variations in both the total playback and HOE-recording optical systems, we derived and built a design that projects a 104x112 mm planar VI 1 m from the HOE using a laser-illuminated 19x16 mm LCD+FOFP image-source. The VI appeared fixed in space and well focused. Viewpoint-induced location errors were <3 mm, and unexpected first-order astigmatism produced 3 cm (3% of 1 m) ambiguity in depth, typically unnoticed by human observers.

  16. Real-time nutrient monitoring in rivers: adaptive sampling strategies, technological challenges and future directions

    NASA Astrophysics Data System (ADS)

    Blaen, Phillip; Khamis, Kieran; Lloyd, Charlotte; Bradley, Chris

    2016-04-01

    Excessive nutrient concentrations in river waters threaten aquatic ecosystem functioning and can pose substantial risks to human health. Robust monitoring strategies are therefore required to generate reliable estimates of river nutrient loads and to improve understanding of the catchment processes that drive spatiotemporal patterns in nutrient fluxes. Furthermore, these data are vital for prediction of future trends under changing environmental conditions and thus the development of appropriate mitigation measures. In recent years, technological developments have led to an increase in the use of continuous in-situ nutrient analysers, which enable measurements at far higher temporal resolutions than can be achieved with discrete sampling and subsequent laboratory analysis. However, such instruments can be costly to run and difficult to maintain (e.g. due to high power consumption and memory requirements), leading to trade-offs between temporal and spatial monitoring resolutions. Here, we highlight how adaptive monitoring strategies, comprising a mixture of temporal sample frequencies controlled by one or more 'trigger variables' (e.g. river stage, turbidity, or nutrient concentration), can advance our understanding of catchment nutrient dynamics while simultaneously overcoming many of the practical and economic challenges encountered in typical in-situ river nutrient monitoring applications. We present examples of short-term variability in river nutrient dynamics, driven by complex catchment behaviour, which support our case for the development of monitoring systems that can adapt in real-time to rapid environmental changes. In addition, we discuss the advantages and disadvantages of current nutrient monitoring techniques, and suggest new research directions based on emerging technologies and highlight how these might improve: 1) monitoring strategies, and 2) understanding of linkages between catchment processes and river nutrient fluxes.

  17. Imaging the eye fundus with real-time en-face spectral domain optical coherence tomography.

    PubMed

    Bradu, Adrian; Podoleanu, Adrian Gh

    2014-04-01

    Real-time display of processed en-face spectral domain optical coherence tomography (SD-OCT) images is important for diagnosis. However, due to many steps of data processing requirements, such as Fast Fourier transformation (FFT), data re-sampling, spectral shaping, apodization, zero padding, followed by software cut of the 3D volume acquired to produce an en-face slice, conventional high-speed SD-OCT cannot render an en-face OCT image in real time. Recently we demonstrated a Master/Slave (MS)-OCT method that is highly parallelizable, as it provides reflectivity values of points at depth within an A-scan in parallel. This allows direct production of en-face images. In addition, the MS-OCT method does not require data linearization, which further simplifies the processing. The computation in our previous paper was however time consuming. In this paper we present an optimized algorithm that can be used to provide en-face MS-OCT images much quicker. Using such an algorithm we demonstrate around 10 times faster production of sets of en-face OCT images than previously obtained as well as simultaneous real-time display of up to 4 en-face OCT images of 200 × 200 pixels(2) from the fovea and the optic nerve of a volunteer. We also demonstrate 3D and B-scan OCT images obtained from sets of MS-OCT C-scans, i.e. with no FFT and no intermediate step of generation of A-scans. PMID:24761303

  18. Real-time detection of moving objects from moving vehicles using dense stereo and optical flow

    NASA Technical Reports Server (NTRS)

    Talukder, Ashit; Matthies, Larry

    2004-01-01

    Dynamic scene perception is very important for autonomous vehicles operating around other moving vehicles and humans. Most work on real-time object tracking from moving platforms has used sparse features or assumed flat scene structures. We have recently extended a real-time, dense stereo system to include realtime, dense optical flow, enabling more comprehensive dynamic scene analysis. We describe algorithms to robustly estimate 6-DOF robot egomotion in the presence of moving objects using dense flow and dense stereo. We then use dense stereo and egomotion estimates to identify & other moving objects while the robot itself is moving. We present results showing accurate egomotion estimation and detection of moving people and vehicles under general 6-DOF motion of the robot and independently moving objects. The system runs at 18.3 Hz on a 1.4 GHz Pentium M laptop, computing 160x120 disparity maps and optical flow fields, egomotion, and moving object segmentation. We believe this is a significant step toward general unconstrained dynamic scene analysis for mobile robots, as well as for improved position estimation where GPS is unavailable.

  19. Real-time Detection of Moving Objects from Moving Vehicles Using Dense Stereo and Optical Flow

    NASA Technical Reports Server (NTRS)

    Talukder, Ashit; Matthies, Larry

    2004-01-01

    Dynamic scene perception is very important for autonomous vehicles operating around other moving vehicles and humans. Most work on real-time object tracking from moving platforms has used sparse features or assumed flat scene structures. We have recently extended a real-time. dense stereo system to include realtime. dense optical flow, enabling more comprehensive dynamic scene analysis. We describe algorithms to robustly estimate 6-DOF robot egomotion in the presence of moving objects using dense flow and dense stereo. We then use dense stereo and egomotion estimates to identify other moving objects while the robot itself is moving. We present results showing accurate egomotion estimation and detection of moving people and vehicles under general 6DOF motion of the robot and independently moving objects. The system runs at 18.3 Hz on a 1.4 GHz Pentium M laptop. computing 160x120 disparity maps and optical flow fields, egomotion, and moving object segmentation. We believe this is a significant step toward general unconstrained dynamic scene analysis for mobile robots, as well as for improved position estimation where GPS is unavailable.

  20. Development of a real-time closed-loop dual wavelength optical polarimeter for glucose monitoring

    NASA Astrophysics Data System (ADS)

    Malik, Bilal H.; Coté, Gerard L.

    2010-02-01

    Over the last decade, noninvasive glucose sensors based on optical polarimetry have been proposed to probe the anterior chamber of the eye. Such sensors would ultimately be used to measure the aqueous humor glucose concentration which is correlated with blood glucose concentration. Although the effect of other chiral components in the eye has been minimized, the time-variant corneal birefringence due to motion artifact is still a limiting factor which needs to be resolved for realization of such a device. Here we present the development of a real-time dual wavelength optical polarimetric system employing a classical three-term feedback controller. Our dual wavelength system utilizes real-time closed-loop feedback based on proportional-integral-derivative (PID) control, which effectively reduced the time taken by the system to stabilize to less than 300 ms while minimizing the effect of motion artifact, which appears as common noise source for both wavelengths. Measurements in the presence of time-variant test cell birefringence demonstrate the sensitivity of the current system to measure glucose within the range of 0-600 mg/dl with a standard error of less than 13 mg/dl using the dual wavelength information.

  1. Estimation of skin optical parameters for real-time hyperspectral imaging applications

    NASA Astrophysics Data System (ADS)

    Bjorgan, Asgeir; Milanic, Matija; Randeberg, Lise Lyngsnes

    2014-06-01

    Hyperspectral imaging combines high spectral and spatial resolution in one modality. This imaging technique is a promising tool for objective medical diagnostics. However, to be attractive in a clinical setting, the technique needs to be fast and accurate. Hyperspectral imaging can be used to analyze tissue properties using spectroscopic methods, and is thus useful as a general purpose diagnostic tool. We combine an analytic diffusion model for photon transport with real-time analysis of the hyperspectral images. This is achieved by parallelizing the inverse photon transport model on a graphics processing unit to yield optical parameters from diffuse reflectance spectra. The validity of this approach was verified by Monte Carlo simulations. Hyperspectral images of human skin in the wavelength range 400-1000 nm, with a spectral resolution of 3.6 nm and 1600 pixels across the field of view (Hyspex VNIR-1600), were used to develop the presented approach. The implemented algorithm was found to output optical properties at a speed of 3.5 ms per line of image data. The presented method is thus capable of meeting the defined real-time requirement, which was 30 ms per line of data.The algorithm is a proof of principle, which will be further developed.

  2. Ranque-Hilsch vortex tube thermocycler for fast DNA amplification and real-time optical detection

    NASA Astrophysics Data System (ADS)

    Ebmeier, Ryan J.; Whitney, Scott E.; Sarkar, Amitabha; Nelson, Michael; Padhye, Nisha V.; Gogos, George; Viljoen, Hendrik J.

    2004-12-01

    An innovative polymerase chain reaction (PCR) thermocycler capable of performing real-time optical detection is described below. This device utilizes the Ranque-Hilsch vortex tube in a system to efficiently and rapidly cycle three 20 μL samples between the denaturation, annealing, and elongation temperatures. The reaction progress is displayed real-time by measuring the size of a fluorescent signal emitted by SYBR green/double-stranded DNA complexes. This device can produce significant reaction yields with very small amounts of initial DNA, for example, it can amplify 0.25 fg (˜5 copies) of a 96 bp bacteriophage λ-DNA fragment 2.7×1011-fold by performing 45 cycles in less than 12 min. The optical threshold (150% of the baseline intensity) was passed 8 min into the reaction at cycle 34. Besides direct applications, the speed and sensitivity of this device enables it to be used as a scientific instrument for basic studies such as PCR assembly and polymerase kinetics.

  3. Selection of fluorescent DNA dyes for real-time LAMP with portable and simple optics.

    PubMed

    Seyrig, Gregoire; Stedtfeld, Robert D; Tourlousse, Dieter M; Ahmad, Farhan; Towery, Keara; Cupples, Alison M; Tiedje, James M; Hashsham, Syed A

    2015-12-01

    Loop-mediated isothermal amplification (LAMP) is increasingly used for point-of-care nucleic acid based diagnostics. LAMP can be monitored in real-time by measuring the increase in fluorescence of DNA binding dyes. However, there is little information comparing the effect of various fluorescent dyes on signal to noise ratio (SNR) or threshold time (Tt). This information is critical for implementation with field deployable diagnostic tools that require small, low power consumption, robust, and inexpensive optical components with reagent saving low volume reactions. In this study, SNR and Tt during real-time LAMP was evaluated with eleven fluorescent dyes. Of all dyes tested, SYTO-82, SYTO-84, and SYTOX Orange resulted in the shortest Tt, and SYTO-81 had the widest range of working concentrations. The optimized protocol detected 10 genome copies of Mycobacterium tuberculosis in less than 10 min, 10 copies of Giardia intestinalis in ~20 min, and 10 copies of Staphylococcus aureus or Salmonella enterica in less than 15 min. Results demonstrate that reaction efficiency depends on both dye type and concentration and the selected polymerase. The optimized protocol was evaluated in the Gene-Z™ device, a hand-held battery operated platform characterized via simple and low cost optics, and a multiple assay microfluidic chip with micron volume reaction wells. Compared to the more conventional intercalating dye (SYBR Green), reliable amplification was only observed in the Gene-Z™ when using higher concentrations of SYTO-81. PMID:26554941

  4. Optical fibre luminescence sensor for real-time LDR brachytherapy dosimetry

    NASA Astrophysics Data System (ADS)

    Woulfe, P.; Sullivan, F. J.; O'Keeffe, S.

    2016-05-01

    An optical fibre sensor for monitoring low dose radiation is presented. The sensor is based on a scintillation material embedded within the optical fibre core, which emits visible light when exposed to low level ionising radiation. The incident level of ionising radiation can be determined by analysing the optical emission. An optical fibre sensor is presented, based on radioluminescence whereby radiation sensitive scintillation material, terbium doped gadolinium oxysulphide (Gd2O2S:Tb), is embedded in a cavity of 250μm of a 500μm plastic optical fibre. The sensor is designed for in-vivo monitoring of the radiation dose during radio-active seed implantation for brachytherapy, in prostate cancer treatment, providing oncologists with real-time information of the radiation dose to the target area and/or nearby critical structures. The radiation from the brachytherapy seeds causes emission of visible light from the scintillation material through the process of radioluminescence, which penetrates the fibre, propagating along the optical fibre for remote detection using a multi-pixel photon counter. The sensor demonstrates a high sensitivity to Iodine-125, the radioactive source most commonly used in brachytherapy for treating prostate cancer.

  5. Real-time detection of lipid bilayer assembly and detergent-initiated solubilization using optical cavities

    NASA Astrophysics Data System (ADS)

    Sun, V.; Armani, A. M.

    2015-02-01

    The cellular membrane governs numerous fundamental biological processes. Therefore, developing a comprehensive understanding of its structure and function is critical. However, its inherent biological complexity gives rise to numerous inter-dependent physical phenomena. In an attempt to develop a model, two different experimental approaches are being pursued in parallel: performing single cell experiments (top down) and using biomimetic structures (bottom up), such as lipid bilayers. One challenge in many of these experiments is the reliance on fluorescent probes for detection which can create confounds in this already complex system. In the present work, a label-free detection method based on an optical resonant cavity is used to detect one of the fundamental physical phenomena in the system: assembly and solubilization of the lipid bilayer. The evanescent field of the cavity strongly interacts with the lipid bilayer, enabling the detection of the bilayer behavior in real-time. Two independent detection mechanisms confirm the formation and detergent-assisted solubilization of the lipid bilayers: (1) a refractive index change and (2) a material loss change. Both mechanisms can be monitored in parallel, on the same device, thus allowing for cross-confirmation of the results. To verify the proposed method, we have detected the formation of self-assembled phosphatidylcholine lipid bilayers from small unilamellar vesicles on the device surface in real-time. Subsequently, we exposed the bilayers to two different detergents (non-ionic Triton X-100 and anionic sodium dodecyl sulfate) to initiate solubilization, and this process was also detected in real-time. After the bilayer solubilization, the device returned to its initial state, exhibiting minimal hysteresis. The experimental wash-off was also collected and analyzed using dynamic light scattering.

  6. Automatic real time evaluation of red blood cell elasticity by optical tweezers.

    PubMed

    Moura, Diógenes S; Silva, Diego C N; Williams, Ajoke J; Bezerra, Marcos A C; Fontes, Adriana; de Araujo, Renato E

    2015-05-01

    Optical tweezers have been used to trap, manipulate, and measure individual cell properties. In this work, we show that the association of a computer controlled optical tweezers system with image processing techniques allows rapid and reproducible evaluation of cell deformability. In particular, the deformability of red blood cells (RBCs) plays a key role in the transport of oxygen through the blood microcirculation. The automatic measurement processes consisted of three steps: acquisition, segmentation of images, and measurement of the elasticity of the cells. An optical tweezers system was setup on an upright microscope equipped with a CCD camera and a motorized XYZ stage, computer controlled by a Labview platform. On the optical tweezers setup, the deformation of the captured RBC was obtained by moving the motorized stage. The automatic real-time homemade system was evaluated by measuring RBCs elasticity from normal donors and patients with sickle cell anemia. Approximately 150 erythrocytes were examined, and the elasticity values obtained by using the developed system were compared to the values measured by two experts. With the automatic system, there was a significant time reduction (60×) of the erythrocytes elasticity evaluation. Automated system can help to expand the applications of optical tweezers in hematology and hemotherapy. PMID:26026527

  7. Automatic real time evaluation of red blood cell elasticity by optical tweezers

    NASA Astrophysics Data System (ADS)

    Moura, Diógenes S.; Silva, Diego C. N.; Williams, Ajoke J.; Bezerra, Marcos A. C.; Fontes, Adriana; de Araujo, Renato E.

    2015-05-01

    Optical tweezers have been used to trap, manipulate, and measure individual cell properties. In this work, we show that the association of a computer controlled optical tweezers system with image processing techniques allows rapid and reproducible evaluation of cell deformability. In particular, the deformability of red blood cells (RBCs) plays a key role in the transport of oxygen through the blood microcirculation. The automatic measurement processes consisted of three steps: acquisition, segmentation of images, and measurement of the elasticity of the cells. An optical tweezers system was setup on an upright microscope equipped with a CCD camera and a motorized XYZ stage, computer controlled by a Labview platform. On the optical tweezers setup, the deformation of the captured RBC was obtained by moving the motorized stage. The automatic real-time homemade system was evaluated by measuring RBCs elasticity from normal donors and patients with sickle cell anemia. Approximately 150 erythrocytes were examined, and the elasticity values obtained by using the developed system were compared to the values measured by two experts. With the automatic system, there was a significant time reduction (60 × ) of the erythrocytes elasticity evaluation. Automated system can help to expand the applications of optical tweezers in hematology and hemotherapy.

  8. Development of an equipment for real time MTF measurement of optical systems

    NASA Astrophysics Data System (ADS)

    Romano, Dimas Rodrigues; de Almeida Nobre, Sergio Antonio; de Albuquerque, Bráulio Fonseca Carneiro

    2008-04-01

    The quality of optical systems concerning contrast and resolution can be quantified through the use of the modulation transfer function (MTF) analysis. This metrology method can give us information about how much contrast is lost when light traverses an optical system for each spatial frequency until the cutoff, or Nyquist frequency. In this work is presented a procedure based on the measurement of a knife edge target from which one can extract the line spread function and, as a consequence, the optical transfer function needed to the MTF analysis. We used in the analysis a least square algorithm to fit the experimental data of the edge spread function and a FFT algorithm to extract the optical transfer function from the line spread function of the measured system. It is of great interest to apply this metrology analysis directly in lens production in order to have real measurements of quality for the optical components as they are manufactured. With this objective in mind we developed a MTF measurement equipment and we will talk about the difficulties involved, and its general characteristics. The main characteristic of our measurement equipment is the possibility of real time measurements, important in the fast quality control assurance needed in lens production.

  9. FPGA based image processing for optical surface inspection with real time constraints

    NASA Astrophysics Data System (ADS)

    Hasani, Ylber; Bodenstorfer, Ernst; Brodersen, Jörg; Mayer, Konrad J.

    2015-02-01

    Today, high-quality printing products like banknotes, stamps, or vouchers, are automatically checked by optical surface inspection systems. In a typical optical surface inspection system, several digital cameras acquire the printing products with fine resolution from different viewing angles and at multiple wavelengths of the visible and also near infrared spectrum of light. The cameras deliver data streams with a huge amount of image data that have to be processed by an image processing system in real time. Due to the printing industry's demand for higher throughput together with the necessity to check finer details of the print and its security features, the data rates to be processed tend to explode. In this contribution, a solution is proposed, where the image processing load is distributed between FPGAs and digital signal processors (DSPs) in such a way that the strengths of both technologies can be exploited. The focus lies upon the implementation of image processing algorithms in an FPGA and its advantages. In the presented application, FPGAbased image-preprocessing enables real-time implementation of an optical color surface inspection system with a spatial resolution of 100 μm and for object speeds over 10 m/s. For the implementation of image processing algorithms in the FPGA, pipeline parallelism with clock frequencies up to 150 MHz together with spatial parallelism based on multiple instantiations of modules for parallel processing of multiple data streams are exploited for the processing of image data of two cameras and three color channels. Due to their flexibility and their fast response times, it is shown that FPGAs are ideally suited for realizing a configurable all-digital PLL for the processing of camera line-trigger signals with frequencies about 100 kHz, using pure synchronous digital circuit design.

  10. All-optical quality-of-signal monitoring in real time

    NASA Astrophysics Data System (ADS)

    Anderson, Betty Lise; Abou-Galala, Feras; Rabb, David; Durresi, Arjan

    2003-08-01

    An new optical correlator containing a tapped delay line with thousands of taps is described. This enables ultra-high resolution correlation. We apply this to monitoring quality-of-signal by correlating the received, degraded bits with and un-degraded signal. The strength of the correlation signal, which is all optical, is proportional to the quality. Dispersion and attenuation can be evaluated in less than 100 ps at 40Gb/s, and jitter and noise in less than 100 ns. This is a significant improvement over minutes or even hours for bit-error-rate measurements. Simulations show good correspondence to eye-diagram measurements, the conventional (but slow) way to measure signal quality. If a network node can know the quality of all its links in real-time, it can re-route signals around poor links, and provide restoration and protection as well. The key to all this is an optical correlator with a very large number of taps in its internal tapped delay line. Our device uses a White cell and a fixed micro-mirror array. In a White cell, light bounces back and forth between three spherical mirrors. Multiple beams circulate in the same cell without interfering and are each refocused to a unique pattern of spots. We make the spots land on the micro-mirror array to switch between cells of slightly different lengths. Our current design provides 6550 possible delays for thousands of light beams, using only ten mirrors, a lens, and the micro-mirror array. We have developed two routing and protection protocols to exploit having this real-time information available to the network.

  11. Real-time characterization of spectral coherence of ultrafast laser based on optical time-stretch

    NASA Astrophysics Data System (ADS)

    Xu, Yiqing; Wei, Xiaoming; Ren, Zhibo; Wong, Kenneth K. Y.; Tsia, Kevin

    2016-03-01

    Nonlinearly generated broadband ultrafast laser have been increasingly utilized in many applications. However, traditional techniques of characterizing these sources lack the ability to observe the instantaneous features and transitory behaviours of both amplitude and phase. With the advent of the optical time stretch techniques, the instantaneous shotto- shot spectral intensity can be directly measured continuously at an unprecedentedly high speed. Meanwhile, the information of the real-time phase variation, which is carried by the frequency-time mapped spectral signal has yet been fully explored. We present a technique of experimentally measuring the spectral coherence dynamics of broadband pulsed sources. Our method relies on a delayed Young's type interferometer combined with optical time-stretch. We perform the proof-of-principle demonstrations of spectral coherence dynamics measurement on two sources: a supercontinuum source and a fiber ring buffered cavity source, both with a repetition rate of MHz. By employing the optical time stretch with a dispersive fiber, we directly map the spectral interference fringes of the delayed neighbouring pulses and obtain a sufficiently large ensemble of spectral interferograms with a real-time oscilloscope (80Gb/s sampling rate). This enables us to directly quantify the spectral coherence dynamics of the ultrafast sources with a temporal resolution down to microseconds. Having the ensemble of single-shot interferograms, we also further calculate the cross spectral coherence correlation matrices of these ultrafast sources. We anticipate that our technique provides a general approach for experimentally evaluating the spectral coherence dynamics of ultrafast laser generated by the nonlinear processes e.g. modulation instability, supercontinuum generation, and Kerr resonator.

  12. Real-time Functional Analysis of Inertial Microfluidic Devices via Spectral Domain Optical Coherence Tomography.

    PubMed

    Dong, Biqin; Chen, Siyu; Zhou, Fan; Chan, Christina H Y; Yi, Ji; Zhang, Hao F; Sun, Cheng

    2016-01-01

    We report the application of spectral-domain optical coherence tomography (SD-OCT) technology that enables real-time functional analysis of sorting microparticles and cells in an inertial microfluidic device. We demonstrated high-speed, high-resolution acquisition of cross-sectional images at a frame rate of 350 Hz, with a lateral resolution of 3 μm and an axial resolution of 1 μm within the microfluidic channel filled with water. We analyzed the temporal sequence of cross-sectional SD-OCT images to determine the position and diameter of microspheres in a spiral microfluidic channel under various flow rates. We used microspheres with known diameters to validate the sub-micrometer precision of the particle size analysis based on a scattering model of spherical microparticles. An additional investigation of sorting live HT-29 cells in the spiral microfluidic channel indicated that the distribution of cells within in the microchannel has a close correspondence with the cells' size distribution. The label-free real-time imaging and analysis of microscale particles in flow offers robustness for practical applications with live cells and allows us to better understand the mechanisms of particle separations in microfluidic sorting systems. PMID:27619202

  13. Intraoperative brain hemodynamic response assessment with real-time hyperspectral optical imaging (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Laurence, Audrey; Pichette, Julien; Angulo-Rodríguez, Leticia M.; Saint Pierre, Catherine; Lesage, Frédéric; Bouthillier, Alain; Nguyen, Dang Khoa; Leblond, Frédéric

    2016-03-01

    Following normal neuronal activity, there is an increase in cerebral blood flow and cerebral blood volume to provide oxygenated hemoglobin to active neurons. For abnormal activity such as epileptiform discharges, this hemodynamic response may be inadequate to meet the high metabolic demands. To verify this hypothesis, we developed a novel hyperspectral imaging system able to monitor real-time cortical hemodynamic changes during brain surgery. The imaging system is directly integrated into a surgical microscope, using the white-light source for illumination. A snapshot hyperspectral camera is used for detection (4x4 mosaic filter array detecting 16 wavelengths simultaneously). We present calibration experiments where phantoms made of intralipid and food dyes were imaged. Relative concentrations of three dyes were recovered at a video rate of 30 frames per second. We also present hyperspectral recordings during brain surgery of epileptic patients with concurrent electrocorticography recordings. Relative concentration maps of oxygenated and deoxygenated hemoglobin were extracted from the data, allowing real-time studies of hemodynamic changes with a good spatial resolution. Finally, we present preliminary results on phantoms obtained with an integrated spatial frequency domain imaging system to recover tissue optical properties. This additional module, used together with the hyperspectral imaging system, will allow quantification of hemoglobin concentrations maps. Our hyperspectral imaging system offers a new tool to analyze hemodynamic changes, especially in the case of epileptiform discharges. It also offers an opportunity to study brain connectivity by analyzing correlations between hemodynamic responses of different tissue regions.

  14. Real-Time Optical Surveillance of LEO/MEO with Small Telescopes

    NASA Astrophysics Data System (ADS)

    Zimmer, P.; McGraw, J.; Ackermann, M.

    J.T. McGraw and Associates, LLC operates two proof-of-concept wide-field imaging systems to test novel techniques for uncued surveillance of LEO/MEO/GEO and, in collaboration with the University of New Mexico (UNM), uses a third small telescope for rapidly queued same-orbit follow-up observations. Using our GPU-accelerated detection scheme, the proof-of-concept systems operating at sites near and within Albuquerque, NM, have detected objects fainter than V=13 at greater than 6 sigma significance. This detection approximately corresponds to a 16 cm object with albedo of 0.12 at 1000 km altitude. Dozens of objects are measured during each operational twilight period, many of which have no corresponding catalog object. The two proof-of-concept systems, separated by ~30km, work together by taking simultaneous images of the same orbital volume to constrain the orbits of detected objects using parallax measurements. These detections are followed-up by imaging photometric observations taken at UNM to confirm and further constrain the initial orbit determination and independently assess the objects and verify the quality of the derived orbits. This work continues to demonstrate that scalable optical systems designed for real-time detection of fast moving objects, which can be then handed off to other instruments capable of tracking and characterizing them, can provide valuable real-time surveillance data at LEO and beyond, which substantively informs the SSA process.

  15. Real-time speckle variance swept-source optical coherence tomography using a graphics processing unit

    PubMed Central

    Lee, Kenneth K. C.; Mariampillai, Adrian; Yu, Joe X. Z.; Cadotte, David W.; Wilson, Brian C.; Standish, Beau A.; Yang, Victor X. D.

    2012-01-01

    Abstract: Advances in swept source laser technology continues to increase the imaging speed of swept-source optical coherence tomography (SS-OCT) systems. These fast imaging speeds are ideal for microvascular detection schemes, such as speckle variance (SV), where interframe motion can cause severe imaging artifacts and loss of vascular contrast. However, full utilization of the laser scan speed has been hindered by the computationally intensive signal processing required by SS-OCT and SV calculations. Using a commercial graphics processing unit that has been optimized for parallel data processing, we report a complete high-speed SS-OCT platform capable of real-time data acquisition, processing, display, and saving at 108,000 lines per second. Subpixel image registration of structural images was performed in real-time prior to SV calculations in order to reduce decorrelation from stationary structures induced by the bulk tissue motion. The viability of the system was successfully demonstrated in a high bulk tissue motion scenario of human fingernail root imaging where SV images (512 × 512 pixels, n = 4) were displayed at 54 frames per second. PMID:22808428

  16. Real-time three-dimensional Fourier-domain optical coherence tomography video image guided microsurgeries

    PubMed Central

    Huang, Yong; Zhang, Kang; Ibrahim, Zuhaib; Cha, Jaepyeong; Lee, W. P. Andrew; Brandacher, Gerald; Gehlbach, Peter L.

    2012-01-01

    Abstract. The authors describe the development of an ultrafast three-dimensional (3D) optical coherence tomography (OCT) imaging system that provides real-time intraoperative video images of the surgical site to assist surgeons during microsurgical procedures. This system is based on a full-range complex conjugate free Fourier-domain OCT (FD-OCT). The system was built in a CPU-GPU heterogeneous computing architecture capable of video OCT image processing. The system displays at a maximum speed of 10  volume/s for an image volume size of 160×80×1024 (X×Y×Z) pixels. We have used this system to visualize and guide two prototypical microsurgical maneuvers: microvascular anastomosis of the rat femoral artery and ultramicrovascular isolation of the retinal arterioles of the bovine retina. Our preliminary experiments using 3D-OCT-guided microvascular anastomosis showed optimal visualization of the rat femoral artery (diameter<0.8  mm), instruments, and suture material. Real-time intraoperative guidance helped facilitate precise suture placement due to optimized views of the vessel wall during anastomosis. Using the bovine retina as a model system, we have performed “ultra microvascular” feasibility studies by guiding handheld surgical micro-instruments to isolate retinal arterioles (diameter∼0.1  mm). Isolation of the microvessels was confirmed by successfully passing a suture beneath the vessel in the 3D imaging environment. PMID:23224164

  17. Real-time, closed-loop dual-wavelength optical polarimetry for glucose monitoring

    NASA Astrophysics Data System (ADS)

    Malik, Bilal H.; Coté, Gerard L.

    2010-01-01

    The development of a real-time, dual-wavelength optical polarimetric system to ultimately probe the aqueous humor glucose concentrations as a means of noninvasive diabetic glucose monitoring is the long-term goal of this research. The key impact of the work is the development of an approach for the reduction of the time-variant corneal birefringence due to motion artifact, which is still a limiting factor preventing the realization of such a device. Our dual-wavelength approach utilizes real-time, closed-loop feedback that employs a classical three-term feedback controller and efficiently reduces the effect of motion artifact that appears as a common noise source for both wavelengths. In vitro results are shown for the open-loop system, and although the dual-wavelength system helps to reduce the noise, it is shown that closed-loop control is necessary to bring the noise down to a sufficient level for physiological monitoring. Specifically, in vitro measurement results with the closed-loop dual-wavelength approach demonstrate a sensitivity of 12.8 mg/dl across the physiologic glucose range in the presence of time-variant test cell birefringence. Overall, it is shown that this polarimetric system has the potential to be used as a noninvasive measure of glucose for diabetes.

  18. Real-time optical flow estimation on a GPU for a skied-steered mobile robot

    NASA Astrophysics Data System (ADS)

    Kniaz, V. V.

    2016-04-01

    Accurate egomotion estimation is required for mobile robot navigation. Often the egomotion is estimated using optical flow algorithms. For an accurate estimation of optical flow most of modern algorithms require high memory resources and processor speed. However simple single-board computers that control the motion of the robot usually do not provide such resources. On the other hand, most of modern single-board computers are equipped with an embedded GPU that could be used in parallel with a CPU to improve the performance of the optical flow estimation algorithm. This paper presents a new Z-flow algorithm for efficient computation of an optical flow using an embedded GPU. The algorithm is based on the phase correlation optical flow estimation and provide a real-time performance on a low cost embedded GPU. The layered optical flow model is used. Layer segmentation is performed using graph-cut algorithm with a time derivative based energy function. Such approach makes the algorithm both fast and robust in low light and low texture conditions. The algorithm implementation for a Raspberry Pi Model B computer is discussed. For evaluation of the algorithm the computer was mounted on a Hercules mobile skied-steered robot equipped with a monocular camera. The evaluation was performed using a hardware-in-the-loop simulation and experiments with Hercules mobile robot. Also the algorithm was evaluated using KITTY Optical Flow 2015 dataset. The resulting endpoint error of the optical flow calculated with the developed algorithm was low enough for navigation of the robot along the desired trajectory.

  19. Real-time implementation of structural and aero-optical effects for hypervelocity missiles

    NASA Astrophysics Data System (ADS)

    Thompson, Rhoe A.; Krawczyk, Walter J.; Kircher, James R.; Trolier, James W.

    1996-05-01

    The Kinetic-kill-vehicle Hardware-in-the-Loop Simulation Facility (KHILS), located at Eglin AFB FL, has been involved in the development and ground testing of Ballistic Missile Defense Organization hit-to-kill interceptor concepts for 10 years. Work is ongoing to characterize the implement hardware-in-the-loop models for missile `environment' effects that are associated with high speed flight in general and endo-atmospheric flight in particular. Two critical areas of interest in endo-atmospheric simulation are: (1) effects on the line-of-sight due to divert thruster firings and the resulting structural vibration, and (2) the line-of-sight aero-optical environment which can be influenced by heated missile flowfields, coolant layers, and thruster fringes. The structural and aero-optical effects manifest themselves as image jitter, blurring, boresight shifts, and increased background radiance. At the KHILS facility, real-time closed-loop simulation techniques are being developed for structural and aero-optical effects presentation. These techniques include both software and hardware solutions. This paper describe the status of activities by describing the issues and the present KHILS solutions. The paper includes discussion of model interfaces with hardware-in-the-loop simulations, timing issues, and data transmittal bandwidth requirements. Image show the effects of structural and aero-optical disturbances on seeker focal plane energy distributions.

  20. Efficient method for near real-time diffuse optical tomography of the human brain

    NASA Astrophysics Data System (ADS)

    Wu, Xue; Eggebrecht, Adam T.; Ferradal, Silvina L.; Culver, Joseph P.; Dehghani, Hamid

    2015-07-01

    Previous studies have showed only regions with a sensitivity higher that 1% of the maximum value can affect the recovery result for diffuse optical tomography (DOT). Two methods of efficient sensitivity map generation based on Finite Element Models (FEM) are developed based on (1) reduced sensitivity matrix and (2) parallelisation process. Time and memory efficiency of these processes are evaluated and compared with conventional methods. It is shown that the computational time for a full head model containing 200k nodes is reduced from 3 hours to 48 minutes and the required memory is reduced from 5.5 GB to 0.5 GB. For a range of mesh densities up to 320k nodes, the required memory is improved by ~1000% and computational time by ~400% to allow near real-time image recovery.

  1. Sensitive Real-Time Monitoring of Refractive Indexes Using a Novel Graphene-Based Optical Sensor

    PubMed Central

    Xing, Fei; Liu, Zhi-Bo; Deng, Zhi-Chao; Kong, Xiang-Tian; Yan, Xiao-Qing; Chen, Xu-Dong; Ye, Qing; Zhang, Chun-Ping; Chen, Yong-Sheng; Tian, Jian-Guo

    2012-01-01

    Based on the polarization-sensitive absorption of graphene under conditions of total internal reflection, a novel optical sensor combining graphene and a microfluidic structure was constructed to achieve the sensitive real-time monitoring of refractive indexes. The atomic thickness and strong broadband absorption of graphene cause it to exhibit very different reflectivity for transverse electric and transverse magnetic modes in the context of a total internal reflection structure, which is sensitive to the media in contact with the graphene. A graphene refractive index sensor can quickly and sensitively monitor changes in the local refractive index with a fast response time and broad dynamic range. These results indicate that graphene, used in a simple and efficient total internal reflection structure and combined with microfluidic techniques, is an ideal material for fabricating refractive index sensors and biosensor devices, which are in high demand. PMID:23205270

  2. Digital signal processor-based real-time optical Doppler tomography system.

    PubMed

    Yan, Shikui; Piao, Daqing; Chen, Yueli; Zhu, Quing

    2004-01-01

    We present a real-time data-processing and display unit based on a custom-designed digital signal processor (DSP) module for imaging tissue structure and Doppler blood flow. The DSP module is incorporated into a conventional optical coherence tomography system. We also demonstrate the flexibility of embedding advanced Doppler processing algorithms in the DSP module. Two advanced velocity estimation algorithms previously introduced by us are incorporated in this DSP module. Experiments on Intralipid flow demonstrate that a pulsatile flow of several hundred pulses per minute can be faithfully captured in M-scan mode by this DSP system. In vivo imaging of a rat's abdominal blood flow is also presented. PMID:15189082

  3. Real-time optical monitoring of permanent lesion progression in radiofrequency ablated cardiac tissue (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Singh-Moon, Rajinder P.; Hendon, Christine P.

    2016-02-01

    Despite considerable advances in guidance of radiofrequency ablation (RFA) therapies for atrial fibrillation, success rates have been hampered by an inability to intraoperatively characterize the extent of permanent injury. Insufficient lesions can elusively create transient conduction blockages that eventually reconduct. Prior studies suggest significantly greater met-myoglobin (Mmb) concentrations in the lesion core than those in the healthy myocardium and may serve as a marker for irreversible tissue damage. In this work, we present real-time monitoring of permanent injury through spectroscopic assessment of Mmb concentrations at the catheter tip. Atrial wedges (n=6) were excised from four fresh swine hearts and submerged under pulsatile flow of warm (37oC) phosphate buffered saline. A commercial RFA catheter inserted into a fiber optic sheath allowed for simultaneous measurement of tissue diffuse reflectance (DR) spectra (500-650nm) during application of RF energy. Optical measurements were continuously acquired before, during, and post-ablation, in addition to healthy neighboring tissue. Met-myoglobin, oxy-myoglobin, and deoxy-myoglobin concentrations were extracted from each spectrum using an inverse Monte Carlo method. Tissue injury was validated with Masson's trichrome and hematoxylin and eosin staining. Time courses revealed a rapid increase in tissue Mmb concentrations at the onset of RFA treatment and a gradual plateauing thereafter. Extracted Mmb concentrations were significantly greater post-ablation (p<0.0001) as compared to healthy tissue and correlated well with histological assessment of severe thermal tissue destruction. On going studies are aimed at integrating these findings with prior work on near infrared spectroscopic lesion depth assessment. These results support the use of spectroscopy-facilitated guidance of RFA therapies for real-time permanent injury estimation.

  4. Real time optical coherence tomography monitoring of Candida albicans biofilm in vitro during photodynamic treatment

    NASA Astrophysics Data System (ADS)

    Suzuki, Luis Cláudio; Araujo Prates, Renato; Raele, Marcus Paulo; Zanardi di Freitas, Anderson; Simões Ribeiro, Martha

    2010-04-01

    The biofilm formed by Candida albicans is the mainly cause of infections associated to medical devices such as catheters. Studies have shown that photodynamic antimicrobial therapy (PAT) has lethal effect on C. albicans, and it is based on photosensitizer (PS) in the presence of low intensity light to generate reactive oxygen species in biological systems. The aim of this study was to analyze in real time, by Optical Coherence Tomography (OCT), the alterations in C. albicans biofilm in vitro during PAT using methylene blue (MB) as a PS and red light. An OCT system with working at 930nm was used, sequential images of 2000×512 pixels were generated at the frame rate of 2.5frames/sec. The dimension of the analyzed sample was 6000μm wide by 1170μm of depth corrected by refraction index of 1.35. We recorded 1min. before and after the irradiation with LED for PAT, generating 8min. of video. For biofilm formation, discs were made from elastomeric silicone catheters. The PS was dissolved in PBS solution, and a final concentration of 1mM MB was applied on biofilm, followed by a red LED irradiation (λ=630nm+/-20nm) during 6min. We performed a curve of survival fraction versus time of irradiation and it was reduced by 100% following 6min. of irradiation. OCT was performed for measurement of biofilm thickness of 110μm when biofilm was formed. During irradiation, the variation of biofilm thickness was ~70μm. We conclude that OCT system is able to show real time optical changes provided by PAT in yeasts organized in biofilm.

  5. Real-Time Optical Fuel-to-Air Ratio Sensor for Gas Turbine Combustors

    NASA Technical Reports Server (NTRS)

    Nguyen, Quang-Viet; Mongia, Rajiv K.; Dibble, Robert W.

    1999-01-01

    The measurement of the temporal distribution of fuel in gas turbine combustors is important in considering pollution, combustion efficiency and combustor dynamics and acoustics. Much of the previous work in measuring fuel distributions in gas turbine combustors has focused on the spatial aspect of the distribution. The temporal aspect however, has often been overlooked, even though it is just as important. In part, this is due to the challenges of applying real-time diagnostic techniques in a high pressure and high temperature environment. A simple and low-cost instrument that non-intrusively measures the real-time fuel-to-air ratio (FAR) in a gas turbine combustor has been developed. The device uses a dual wavelength laser absorption technique to measure the concentration of most hydrocarbon fuels such as jet fuel, methane, propane, etc. The device can be configured to use fiber optics to measure the local FAR inside a high pressure test rig without the need for windows. Alternatively, the device can readily be used in test rigs that have existing windows without modifications. An initial application of this instrument was to obtain time-resolved measurements of the FAR in the premixer of a lean premixed prevaporized (LPP) combustor at inlet air pressures and temperatures as high as 17 atm at 800 K, with liquid JP-8 as the fuel. Results will be presented that quantitatively show the transient nature of the local FAR inside a LPP gas turbine combustor at actual operating conditions. The high speed (kHz) time resolution of this device, combined with a rugged fiber optic delivery system, should enable the realization of a flight capable active-feedback and control system for the abatement of noise and pollutant emissions in the future. Other applications that require an in-situ and time-resolved measurement of fuel vapor concentrations should also find this device to be of use.

  6. Germanium-doped optical fiber for real-time radiation dosimetry

    NASA Astrophysics Data System (ADS)

    Mizanur Rahman, A. K. M.; Zubair, H. T.; Begum, Mahfuza; Abdul-Rashid, H. A.; Yusoff, Z.; Ung, N. M.; Mat-Sharif, K. A.; Wan Abdullah, W. S.; Amouzad Mahdiraji, Ghafour; Amin, Y. M.; Maah, M. J.; Bradley, D. A.

    2015-11-01

    Over the past three decades growing demand for individualized in vivo dosimetry and subsequent dose verification has led to the pursuit of newer, novel and economically feasible materials for dosimeters. These materials are to facilitate features such as real-time sensing and fast readouts. In this paper, purposely composed SiO2:Ge optical fiber is presented as a suitable candidate for dosimetry. The optical fiber is meant to take advantage of the RL/OSL technique, providing both online remote monitoring of dose rate, and fast readouts for absorbed dose. A laboratory-assembled OSL reader has been used to acquire the RL/OSL response to LINAC irradiations (6 MV photons). The notable RL characteristics observed include constant level of luminescence for the same dose rate (providing better consistency compared to TLD-500), and linearity of response in the radiotherapy range (1 Gy/min to 6 Gy/min). The OSL curve was found to conform to an exponential decay characteristic (illumination with low LED source). The Ge doping resulted in an effective atomic number, Zeff, of 13.5 (within the bone equivalent range). The SiO2:Ge optical fiber sensor, with efficient coupling, can be a viable solution for in vivo dosimetry, besides a broad range of applications.

  7. Real-time ground-based optical detection system for space debris

    NASA Astrophysics Data System (ADS)

    Marchant, Jonathan; Green, Simon; Dick, James

    1996-10-01

    There are many advantages to supplementing ground based radar debris detection systems with optical systems. For example: objects with a low radar signature can still be optically bright (and vice versa); in the field of space debris optical detection is less sensitive to range; the minimum detectable debris size for a given range is less than that for radar. Destructive debris can be as small as 1 cm, so any improvement in detection sensitivity towards this standard is important. To improve the accuracy of debris orbital elements, a real-time detection system might be preferable in contrast to one in which images are stored for post-observation ('daytime') analysis. This is because more than one telescope is needed to lengthen the observing baseline and so increase the detected fraction of the debris orbit. Therefore, any software based at one telescope that recognizes debris in its field of view, produces a first approximation of its orbit elements and alerts extra telescopes along track, must process its data quickly, and preferably during the same pass. A prototype of such a software system under development for use with a CCD camera at the Royal Greenwich Observatory's satellite laser ranger at Herstmonceux, East Sussex, England, is outlined. The methods which the detection algorithm employs to handle data from the camera system are described, along with the limitations that the hardware and processing time impose on the physical nature of the problem.

  8. Genetic algorithms for adaptive real-time control in space systems

    NASA Technical Reports Server (NTRS)

    Vanderzijp, J.; Choudry, A.

    1988-01-01

    Genetic Algorithms that are used for learning as one way to control the combinational explosion associated with the generation of new rules are discussed. The Genetic Algorithm approach tends to work best when it can be applied to a domain independent knowledge representation. Applications to real time control in space systems are discussed.

  9. Application of independent component analysis method in real-time spectral analysis of gaseous mixtures for acousto-optical spectrometers based on differential optical absorption spectroscopy

    NASA Astrophysics Data System (ADS)

    Fadeyev, A. V.; Pozhar, V. E.

    2012-10-01

    It is discussed the reliability problem of time-optimized method for remote optical spectral analysis of gas-polluted ambient air. The method based on differential optical absorption spectroscopy (DOAS) enables fragmentary spectrum registration (FSR) and is suitable for random-spectral-access (RSA) optical spectrometers like acousto-optical (AO) ones. Here, it is proposed the algorithm based on statistical method of independent component analysis (ICA) for estimation of a correctness of absorption spectral lines selection for FSR-method. Implementations of ICA method for RSA-based real-time adaptive systems are considered. Numerical simulations are presented with use of real spectra detected by the trace gas monitoring system GAOS based on AO spectrometer.

  10. Portable real-time optical coherence tomography system for intraoperative imaging and staging of breast cancer

    NASA Astrophysics Data System (ADS)

    Nguyen, Freddy T.; Zysk, Adam M.; Kotynek, Jan G.; Bellafiore, Frank J.; Rowland, Kendrith M.; Johnson, Patricia A.; Chaney, J. Eric; Boppart, Stephen A.

    2007-02-01

    Breast cancer continues to be one of the most widely diagnosed forms of cancer amongst women and the second leading type of cancer deaths amongst women. The recurrence rate of breast cancer is highly dependent on several factors including the complete removal of the primary tumor and the presence of cancer cells in involved lymph nodes. The metastatic spread and staging of breast cancer is also evaluated through the nodal assessment of the regional lymphatic system. A portable real-time spectral domain optical coherence tomography system is being presented as a clinical diagnostic tool in the intraoperative delineation of tumor margins as well as for real time lymph node assessment. The system employs a super luminescent diode centered at 1310 nm with a bandwidth of 92 nm. Using a spectral domain detection system, the data is acquired at a rate of 5 KHz / axial scan. The sample arm is a galvanometer scanning telecentric probe with an objective lens (f = 60 mm, confocal parameter = 1.5 mm) yielding an axial resolution of 8.3 μm and a transverse resolution of 35.0 μm. Images of tumor margins are acquired in the operating room ex vivo on freshly excised human tissue specimen. This data shows the potential of the use of OCT in defining the structural tumor margins in breast cancer. Images taken from ex-vivo samples on the bench system clearly delineate the differences between clusters of tumor cells and nearby adipose cells. In addition, the data shows the potential for OCT as a diagnostic tool in the staging of cancer metastasis through locoregional lymph node assessment.

  11. Optical coherence tomography imaging of retinal damage in real time under a stimulus electrode

    NASA Astrophysics Data System (ADS)

    Cohen, Ethan; Agrawal, Anant; Connors, Megan; Hansen, Barry; Charkhkar, Hamid; Pfefer, Joshua

    2011-10-01

    We have developed a novel method to study the effects of electrical stimulation of the local retina directly under an epiretinal stimulus electrode in real time. Using optical coherence tomography (OCT) and a superfused retinal eyecup preparation, we obtained high-resolution images of the rabbit retina directly under an optically transparent saline-filled fluoropolymer stimulation tube electrode. During OCT imaging, 50 Hz trains of biphasic current pulses 1 ms/phase (23-749 µC cm-2 ph-1) were applied to the retinal surface for 5 min. After imaging, the stimulated regions were stained with the dye propidium iodide (PI) to reveal cytotoxic damage. Pulse train stimulation at 44-133 µC cm-2 ph-1 had little effect on the retina; however, trains >=442 µC cm-2 ph-1 caused increases in the reflectance of the inner plexiform layer (IPL) and edema. The damage seen in retinal OCT images matched the pattern observed in histological sections, and in the PI staining. With pulse trains >=442 µC cm-2 ph-1, rapid increases in the reflectivity of the IPL could be observed under the stimulus electrode. Below the electrode, we observed a ring-like pattern of retinal detachment in the subretinal space. The OCT imaging method may be useful for analyzing overstimulation of neuronal tissue by electrodes in many brain regions. This paper was originally submitted for the special issue containing contributions from the Sixth Biennial Research Congress of The Eye and the Chip.

  12. Retinal angiography with real-time speckle variance optical coherence tomography.

    PubMed

    Xu, Jing; Han, Sherry; Balaratnasingam, Chandrakumar; Mammo, Zaid; Wong, Kevin S K; Lee, Sieun; Cua, Michelle; Young, Mei; Kirker, Andrew; Albiani, David; Forooghian, Farzin; Mackenzie, Paul; Merkur, Andrew; Yu, Dao-Yi; Sarunic, Marinko V

    2015-10-01

    This report describes a novel, non-invasive and label-free optical imaging technique, speckle variance optical coherence tomography (svOCT), for visualising blood flow within human retinal capillary networks. This imaging system uses a custom-built swept source OCT system operating at a line rate of 100 kHz. Real-time processing and visualisation is implemented on a consumer grade graphics processing unit. To investigate the quality of microvascular detail acquired with this device we compared images of human capillary networks acquired with svOCT and fluorescein angiography. We found that the density of capillary microvasculature acquired with this svOCT device was visibly greater than fluorescein angiography. We also found that this svOCT device had the capacity to generate en face images of distinct capillary networks that are morphologically comparable with previously published histological studies. Finally, we found that this svOCT device has the ability to non-invasively illustrate the common manifestations of diabetic retinopathy and retinal vascular occlusion. The results of this study suggest that graphics processing unit accelerated svOCT has the potential to non-invasively provide useful quantitative information about human retinal capillary networks. Therefore svOCT may have clinical and research applications for the management of retinal microvascular diseases, which are a major cause of visual morbidity worldwide. PMID:25733527

  13. Adaptation of Control Center Software to Commerical Real-Time Display Applications

    NASA Technical Reports Server (NTRS)

    Collier, Mark D.

    1994-01-01

    NASA-Marshall Space Flight Center (MSFC) is currently developing an enhanced Huntsville Operation Support Center (HOSC) system designed to support multiple spacecraft missions. The Enhanced HOSC is based upon a distributed computing architecture using graphic workstation hardware and industry standard software including POSIX, X Windows, Motif, TCP/IP, and ANSI C. Southwest Research Institute (SwRI) is currently developing a prototype of the Display Services application for this system. Display Services provides the capability to generate and operate real-time data-driven graphic displays. This prototype is a highly functional application designed to allow system end users to easily generate complex data-driven displays. The prototype is easy to use, flexible, highly functional, and portable. Although this prototype is being developed for NASA-MSFC, the general-purpose real-time display capability can be reused in similar mission and process control environments. This includes any environment depending heavily upon real-time data acquisition and display. Reuse of the prototype will be a straight-forward transition because the prototype is portable, is designed to add new display types easily, has a user interface which is separated from the application code, and is very independent of the specifics of NASA-MSFC's system. Reuse of this prototype in other environments is a excellent alternative to creation of a new custom application, or for environments with a large number of users, to purchasing a COTS package.

  14. Near Real-Time Automatic Marine Vessel Detection on Optical Satellite Images

    NASA Astrophysics Data System (ADS)

    Máttyus, G.

    2013-05-01

    Vessel monitoring and surveillance is important for maritime safety and security, environment protection and border control. Ship monitoring systems based on Synthetic-aperture Radar (SAR) satellite images are operational. On SAR images the ships made of metal with sharp edges appear as bright dots and edges, therefore they can be well distinguished from the water. Since the radar is independent from the sun light and can acquire images also by cloudy weather and rain, it provides a reliable service. Vessel detection from spaceborne optical images (VDSOI) can extend the SAR based systems by providing more frequent revisit times and overcoming some drawbacks of the SAR images (e.g. lower spatial resolution, difficult human interpretation). Optical satellite images (OSI) can have a higher spatial resolution thus enabling the detection of smaller vessels and enhancing the vessel type classification. The human interpretation of an optical image is also easier than as of SAR image. In this paper I present a rapid automatic vessel detection method which uses pattern recognition methods, originally developed in the computer vision field. In the first step I train a binary classifier from image samples of vessels and background. The classifier uses simple features which can be calculated very fast. For the detection the classifier is slided along the image in various directions and scales. The detector has a cascade structure which rejects most of the background in the early stages which leads to faster execution. The detections are grouped together to avoid multiple detections. Finally the position, size(i.e. length and width) and heading of the vessels is extracted from the contours of the vessel. The presented method is parallelized, thus it runs fast (in minutes for 16000 × 16000 pixels image) on a multicore computer, enabling near real-time applications, e.g. one hour from image acquisition to end user.

  15. An SDR-Based Real-Time Testbed for GNSS Adaptive Array Anti-Jamming Algorithms Accelerated by GPU.

    PubMed

    Xu, Hailong; Cui, Xiaowei; Lu, Mingquan

    2016-01-01

    Nowadays, software-defined radio (SDR) has become a common approach to evaluate new algorithms. However, in the field of Global Navigation Satellite System (GNSS) adaptive array anti-jamming, previous work has been limited due to the high computational power demanded by adaptive algorithms, and often lack flexibility and configurability. In this paper, the design and implementation of an SDR-based real-time testbed for GNSS adaptive array anti-jamming accelerated by a Graphics Processing Unit (GPU) are documented. This testbed highlights itself as a feature-rich and extendible platform with great flexibility and configurability, as well as high computational performance. Both Space-Time Adaptive Processing (STAP) and Space-Frequency Adaptive Processing (SFAP) are implemented with a wide range of parameters. Raw data from as many as eight antenna elements can be processed in real-time in either an adaptive nulling or beamforming mode. To fully take advantage of the parallelism resource provided by the GPU, a batched method in programming is proposed. Tests and experiments are conducted to evaluate both the computational and anti-jamming performance. This platform can be used for research and prototyping, as well as a real product in certain applications. PMID:26978363

  16. An SDR-Based Real-Time Testbed for GNSS Adaptive Array Anti-Jamming Algorithms Accelerated by GPU

    PubMed Central

    Xu, Hailong; Cui, Xiaowei; Lu, Mingquan

    2016-01-01

    Nowadays, software-defined radio (SDR) has become a common approach to evaluate new algorithms. However, in the field of Global Navigation Satellite System (GNSS) adaptive array anti-jamming, previous work has been limited due to the high computational power demanded by adaptive algorithms, and often lack flexibility and configurability. In this paper, the design and implementation of an SDR-based real-time testbed for GNSS adaptive array anti-jamming accelerated by a Graphics Processing Unit (GPU) are documented. This testbed highlights itself as a feature-rich and extendible platform with great flexibility and configurability, as well as high computational performance. Both Space-Time Adaptive Processing (STAP) and Space-Frequency Adaptive Processing (SFAP) are implemented with a wide range of parameters. Raw data from as many as eight antenna elements can be processed in real-time in either an adaptive nulling or beamforming mode. To fully take advantage of the parallelism resource provided by the GPU, a batched method in programming is proposed. Tests and experiments are conducted to evaluate both the computational and anti-jamming performance. This platform can be used for research and prototyping, as well as a real product in certain applications. PMID:26978363

  17. Real-time motion-adaptive delivery (MAD) using binary MLC: I. Static beam (topotherapy) delivery

    NASA Astrophysics Data System (ADS)

    Lu, Weiguo

    2008-11-01

    Intra-fraction target motion hits the fundamental basis of IMRT where precise target positions are assumed. Real-time motion compensation is necessary to ensure that the same dose is delivered as planned. Strategies for conventional IMRT delivery for moving targets by dynamic multi-leaf collimators (MLC) tracking are well published. Binary MLC-based IMRT, such as TomoTherapy®, requires synchronized motion of MLC, the couch and the gantry, which suggests a unique motion management strategy. Thanks to its ultra-fast leaf response and fast projection rate, real-time motion compensation for binary MLC-based IMRT is feasible. Topotherapy is a new IMRT delivery technique, which can be implemented in commercial helical TomoTherapy® machines using only fixed gantry positions. In this paper, we present a novel approach for TopoTherapy delivery that adjusts for moving targets without additional hardware and control requirement. This technique uses the planned leaf sequence but rearranges the projection and leaf indices. It does not involve time-consuming operations, such as reoptimization. Unlike gating or breath-hold-based methods, this technique can achieve nearly a 100% duty cycle with little breath control. Unlike dynamic MLC-based tracking methods, this technique requires neither the whole target motion trajectory nor the velocity of target motion. Instead, it only requires instantaneous target positions, which greatly simplifies the system implementation. Extensive simulations, including the worst-case scenarios, validated the presented technique to be applicable to relatively regular or mild irregular respirations. The delivered dose conforms well to the target, and significant margin reduction can be achieved provided that accurate, real-time tumor localization is available.

  18. Real time pulse width monitor for Intensified Charge Coupled Device (ICCD) electro-optic shutters

    SciTech Connect

    Yates, G.J.

    1996-12-01

    A method is described or controlling and measuring the pulse width of electrical gate pulses used for optical shuttering of image intensifier. The intensifiers are coupled to high frame rate Charge-Coupled-Devices (CCD) or Focus-Projection Scan (FPS) vidicon TV cameras for readout and telemetry of time resolved image sequences. The shutter duration or gate width of individual shutters is measured in real time and encoded in the video frame corresponding to a given shutter interval. The shutter information is updated once catch video frame by strobing new data with each TV camera vertical sync pulse. This circuitry is used in conjunction with commercial video insertion/annotation equipment to provide die shutter width information in alpha numeric text form along with the time resolved video image on a frame-by-frame basis. The measurement technique and circuitry involving a combination of high speed digital counters and analog integrators for measurements in the Ins to 1024 ns range are described. The accuracy obtained is compared with measurements obtained using batch speed DSOs. The measured data are provided in 10-bit Binary (Bi) and four decades of Binary Coded Decimal (BCD) and also displayed on four digit seven segment displays. The control circuitry including digital and analog input means for gate width selection are described. The implementation of both measurement and control circuitry into an Intensified Shuttered CCD (ISCCD) radiometric system for recording fast shuttered images at RS-170 to 4 KHz frame rates is presented.

  19. Real-time imaging of suction blistering in human skin using optical coherence tomography.

    PubMed

    Carvalho, Joana C O; Palero, Jonathan A; Jurna, Martin

    2015-12-01

    Separation of skin epidermis from the dermis by suction blistering has been used with high success rate for autologous skin epidermal grafting in burns, chronic wounds and vitiligo transplantation treatment. Although commercial products that achieve epidermal grafting by suction blistering are presently available, there is still limited knowledge and understanding on the dynamic process of epidermal-dermal separation during suction blistering. In this report we integrated a suction system to an Optical Coherence Tomography (OCT) which allowed for the first time, real-time imaging of the suction blistering process in human skin. We describe in this report the evolution of a suction blister where the growth is modeled with a Boltzmann sigmoid function. We further investigated the relationship between onset and steady-state blister times, blister growth rate, applied suction pressure and applied local skin temperature. Our results show that while the blister time is inversely proportional to the applied suction pressure, the relationship between the blister time and the applied temperature is described by an exponential decay. PMID:26713194

  20. Real time imaging of peripheral nerve vasculature using optical coherence angiography

    NASA Astrophysics Data System (ADS)

    Vasudevan, Srikanth; Kumsa, Doe; Takmakov, Pavel; Welle, Cristin G.; Hammer, Daniel X.

    2016-03-01

    The peripheral nervous system (PNS) carries bidirectional information between the central nervous system and distal organs. PNS stimulation has been widely used in medical devices for therapeutic indications, such as bladder control and seizure cessation. Investigational uses of PNS stimulation include providing sensory feedback for improved control of prosthetic limbs. While nerve safety has been well documented for stimulation parameters used in marketed devices, novel PNS stimulation devices may require alternative stimulation paradigms to achieve maximum therapeutic benefit. Improved testing paradigms to assess the safety of stimulation will expedite the development process for novel PNS stimulation devices. The objective of this research is to assess peripheral nerve vascular changes in real-time with optical coherence angiography (OCA). A 1300-nm OCA system was used to image vasculature changes in the rat sciatic nerve in the region around a surface contacting single electrode. Nerves and vasculature were imaged without stimulation for 180 minutes to quantify resting blood vessel diameter. Walking track analysis was used to assess motor function before and 6 days following experiments. There was no significant change in vessel diameter between baseline and other time points in all animals. Motor function tests indicated the experiments did not impair functionality. We also evaluated the capabilities to image the nerve during electrical stimulation in a pilot study. Combining OCA with established nerve assessment methods can be used to study the effects of electrical stimulation safety on neural and vascular tissue in the periphery.

  1. Optimization of compute unified device architecture for real-time ultrahigh-resolution optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Kim, Ji-hyun; Aum, Jaehong; Han, Jae-Ho; Jeong, Jichai

    2015-01-01

    We propose an optimized signal processing scheme that utilizes the compute unified device architecture (CUDA) for real-time spectral domain optical coherence tomography (OCT). Because linear spline interpolation and the direct spectral reshaping method have low data and control dependencies, these algorithms maximally utilize graphic processing unit (GPU) resources for dispersion control. In addition, data transfer between main memory and GPU, regarded as one of the most wasteful and time-consuming processes in GPU computing, is executed in parallel with the signal processing by overlapping kernel execution and data transfers. Experimental results obtained from application of the proposed scheme to a laboratory constructed OCT system comprising five spectrally shifted SLDs indicate that the OCT system has an axial resolution of 4.8 μm and transverse resolution of 13 μm in air. Further, coherence artifacts are reduced by 3-14 dB over the side-lobes in the point spread function. The optimization of CUDA enables OCT imaging rates up to 350 kHz (A-lines/sec) with a single GTX680 GPU.

  2. Real-time imaging of suction blistering in human skin using optical coherence tomography

    PubMed Central

    Carvalho, Joana C.O.; Palero, Jonathan A.; Jurna, Martin

    2015-01-01

    Separation of skin epidermis from the dermis by suction blistering has been used with high success rate for autologous skin epidermal grafting in burns, chronic wounds and vitiligo transplantation treatment. Although commercial products that achieve epidermal grafting by suction blistering are presently available, there is still limited knowledge and understanding on the dynamic process of epidermal-dermal separation during suction blistering. In this report we integrated a suction system to an Optical Coherence Tomography (OCT) which allowed for the first time, real-time imaging of the suction blistering process in human skin. We describe in this report the evolution of a suction blister where the growth is modeled with a Boltzmann sigmoid function. We further investigated the relationship between onset and steady-state blister times, blister growth rate, applied suction pressure and applied local skin temperature. Our results show that while the blister time is inversely proportional to the applied suction pressure, the relationship between the blister time and the applied temperature is described by an exponential decay. PMID:26713194

  3. Real-time optical monitoring of microbial growth using optimal combination of light-emitting diodes

    NASA Astrophysics Data System (ADS)

    Kobayashi, Ken-ichi; Yamada, Takeshi; Hiraishi, Akira; Nakauchi, Shigeki

    2012-12-01

    We developed a real-time optical monitoring system consisting of a monochrome complementary metal-oxide semiconductor (CMOS) camera and two light-emitting diodes (LEDs) with a constant temperature incubator for the rapid detection of microbial growth on solid media. As a target organism, we used Alicyclobacillus acidocaldarius, which is an acidophilic thermophilic endospore-forming bacterium able to survive in pasteurization processes and grow in acidic drink products such as apple juice. This bacterium was cultured on agar medium with a redox dye applied to improve detection sensitivity. On the basis of spectroscopic properties of the colony, medium, and LEDs, an optimal combination of two LED illuminations was selected to maximize the contrast between the colony and medium areas. We measured A. acidocaldarius and Escherichia coli at two different dilution levels using these two LEDs. From the results of time-course changes in the number of detected pixels in the detection images, a similar growth rate was estimated amongst the same species of microbes, regardless of the dilution level. This system has the ability to detect a colony of approximately 26 μm in diameter in a detection image, and it can be interpreted that the size corresponds to less than 20 μm diameter in visual inspection.

  4. Real-time display on Fourier domain optical coherence tomography system using a graphics processing unit.

    PubMed

    Watanabe, Yuuki; Itagaki, Toshiki

    2009-01-01

    Fourier domain optical coherence tomography (FD-OCT) requires resampling of spectrally resolved depth information from wavelength to wave number, and the subsequent application of the inverse Fourier transform. The display rates of OCT images are much slower than the image acquisition rates due to processing speed limitations on most computers. We demonstrate a real-time display of processed OCT images using a linear-in-wave-number (linear-k) spectrometer and a graphics processing unit (GPU). We use the linear-k spectrometer with the combination of a diffractive grating with 1200 lines/mm and a F2 equilateral prism in the 840-nm spectral region to avoid calculating the resampling process. The calculations of the fast Fourier transform (FFT) are accelerated by the GPU with many stream processors, which realizes highly parallel processing. A display rate of 27.9 frames/sec for processed images (2048 FFT size x 1000 lateral A-scans) is achieved in our OCT system using a line scan CCD camera operated at 27.9 kHz. PMID:20059237

  5. Real-time display on Fourier domain optical coherence tomography system using a graphics processing unit

    NASA Astrophysics Data System (ADS)

    Watanabe, Yuuki; Itagaki, Toshiki

    2009-11-01

    Fourier domain optical coherence tomography (FD-OCT) requires resampling of spectrally resolved depth information from wavelength to wave number, and the subsequent application of the inverse Fourier transform. The display rates of OCT images are much slower than the image acquisition rates due to processing speed limitations on most computers. We demonstrate a real-time display of processed OCT images using a linear-in-wave-number (linear-k) spectrometer and a graphics processing unit (GPU). We use the linear-k spectrometer with the combination of a diffractive grating with 1200 lines/mm and a F2 equilateral prism in the 840-nm spectral region to avoid calculating the resampling process. The calculations of the fast Fourier transform (FFT) are accelerated by the GPU with many stream processors, which realizes highly parallel processing. A display rate of 27.9 frames/sec for processed images (2048 FFT size×1000 lateral A-scans) is achieved in our OCT system using a line scan CCD camera operated at 27.9 kHz.

  6. Legionellosis and Lung Abscesses: Contribution of Legionella Quantitative Real-Time PCR to an Adapted Followup

    PubMed Central

    Descours, G.; Tellini, C.; Flamens, C.; Philit, F.; Celard, M.; Etienne, J.; Lina, G.; Jarraud, S.

    2013-01-01

    We report a case of severe Legionnaires' disease (LD) complicated by a lung abscess in an immunocompetent patient who required ECMO therapy and thoracic surgery. The results of repeated Legionella quantitative real-time PCR performed on both sera and respiratory samples correlated with the LD severity and the poor clinical outcome. Moreover, the PCR allowed for the detection of Legionella DNA in the lung abscess specimen, which was negative when cultured for Legionella. This case report provides a logical basis for further investigations to examine whether the Legionella quantitative PCR could improve the assessment of LD severity and constitute a prognostic marker. PMID:23862082

  7. Adaptive Interface Approach Using a Real Time Biocybernetic System: Control of Hazardous Awareness

    NASA Technical Reports Server (NTRS)

    Ray, William J.

    2002-01-01

    The focus of this current grant was to continue our work which focused on the manner in which psychophysiological markers can be used to index hazardous states of awareness and to explore the feasibility of developing on-line systems that utilize real time feedback to modify on-going behavioral processes. In this work we have incorporated a multifaceted approach which includes psychophysiological, subjective, and performance based measures. We have considered this from both an internal and external perspective as reflected in work from a variety of labs.

  8. Patient-Specific Learning in Real Time for Adaptive Monitoring in Critical Care

    PubMed Central

    Szolovits, Peter

    2011-01-01

    Intensive care monitoring systems are typically developed from population data, but do not take into account the variability among individual patients’ characteristics. This study develops patient-specific alarm algorithms in real time. Classification tree and neural network learning were carried out in batch mode on individual patients’ vital sign numerics in successive intervals of incremental duration to generate binary classifiers of patient state and thus to determine when to issue an alarm. Results suggest that the performance of these classifiers follows the course of a learning curve. After eight hours of patient-specific training during each of ten monitoring sessions, our neural networks reached average sensitivity, specificity, positive predictive value, and accuracy of 0.96, 0.99, 0.79, and 0.99 respectively. The classification trees achieved 0.84, 0.98, 0.72, and 0.98 respectively. Thus, patient-specific modeling in real time is not only feasible but also effective in generating alerts at the bedside. PMID:18463000

  9. Adapting CALIPSO Climate Measurements for Near Real Time Analyses and Forecasting

    NASA Technical Reports Server (NTRS)

    Vaughan, Mark A.; Trepte, Charles R.; Winker, David M.; Avery, Melody A.; Campbell, James; Hoff, Ray; Young, Stuart; Getzewich, Brian J.; Tackett, Jason L.; Kar, Jayanta

    2011-01-01

    The Cloud-Aerosol Lidar and Infrared Pathfinder satellite Observations (CALIPSO) mission was originally conceived and designed as a climate measurements mission, with considerable latency between data acquisition and the release of the level 1 and level 2 data products. However, the unique nature of the CALIPSO lidar backscatter profiles quickly led to the qualitative use of CALIPSO?s near real time (i.e., ? expedited?) lidar data imagery in several different forecasting applications. To enable quantitative use of their near real time analyses, the CALIPSO project recently expanded their expedited data catalog to include all of the standard level 1 and level 2 lidar data products. Also included is a new cloud cleared level 1.5 profile product developed for use by operational forecast centers for verification of aerosol predictions. This paper describes the architecture and content of the CALIPSO expedited data products. The fidelity and accuracy of the expedited products are assessed via comparisons to the standard CALIPSO data products.

  10. Real-time image dehazing using local adaptive neighborhoods and dark-channel-prior

    NASA Astrophysics Data System (ADS)

    Valderrama, Jesus A.; Díaz-Ramírez, Víctor H.; Kober, Vitaly; Hernandez, Enrique

    2015-09-01

    A real-time algorithm for single image dehazing is presented. The algorithm is based on calculation of local neighborhoods of a hazed image inside a moving window. The local neighborhoods are constructed by computing rank-order statistics. Next the dark-channel-prior approach is applied to the local neighborhoods to estimate the transmission function of the scene. By using the suggested approach there is no need for applying a refining algorithm to the estimated transmission such as the soft matting algorithm. To achieve high-rate signal processing the proposed algorithm is implemented exploiting massive parallelism on a graphics processing unit (GPU). Computer simulation results are carried out to test the performance of the proposed algorithm in terms of dehazing efficiency and speed of processing. These tests are performed using several synthetic and real images. The obtained results are analyzed and compared with those obtained with existing dehazing algorithms.

  11. Characterization, adaptive traffic shaping, and multiplexing of real-time MPEG II video

    NASA Astrophysics Data System (ADS)

    Agrawal, Sanjay; Barry, Charles F.; Binnai, Vinay; Kazovsky, Leonid G.

    1997-01-01

    We obtain network traffic model for real-time MPEG-II encoded digital video by analyzing video stream samples from real-time encoders from NUKO Information Systems. MPEG-II sample streams include a resolution intensive movie, City of Joy, an action intensive movie, Aliens, a luminance intensive (black and white) movie, Road To Utopia, and a chrominance intensive (color) movie, Dick Tracy. From our analysis we obtain a heuristic model for the encoded video traffic which uses a 15-stage Markov process to model the I,B,P frame sequences within a group of pictures (GOP). A jointly-correlated Gaussian process is used to model the individual frame sizes. Scene change arrivals are modeled according to a gamma process. Simulations show that our MPEG-II traffic model generates, I,B,P frame sequences and frame sizes that closely match the sample MPEG-II stream traffic characteristics as they relate to latency and buffer occupancy in network queues. To achieve high multiplexing efficiency we propose a traffic shaping scheme which sets preferred 1-frame generation times among a group of encoders so as to minimize the overall variation in total offered traffic while still allowing the individual encoders to react to scene changes. Simulations show that our scheme results in multiplexing gains of up to 10% enabling us to multiplex twenty 6 Mbps MPEG-II video streams instead of 18 streams over an ATM/SONET OC3 link without latency or cell loss penalty. This scheme is due for a patent.

  12. Real-Time Automatic Segmentation of Optical Coherence Tomography Volume Data of the Macular Region

    PubMed Central

    Tian, Jing; Varga, Boglárka; Somfai, Gábor Márk; Lee, Wen-Hsiang; Smiddy, William E.; Cabrera DeBuc, Delia

    2015-01-01

    Optical coherence tomography (OCT) is a high speed, high resolution and non-invasive imaging modality that enables the capturing of the 3D structure of the retina. The fast and automatic analysis of 3D volume OCT data is crucial taking into account the increased amount of patient-specific 3D imaging data. In this work, we have developed an automatic algorithm, OCTRIMA 3D (OCT Retinal IMage Analysis 3D), that could segment OCT volume data in the macular region fast and accurately. The proposed method is implemented using the shortest-path based graph search, which detects the retinal boundaries by searching the shortest-path between two end nodes using Dijkstra’s algorithm. Additional techniques, such as inter-frame flattening, inter-frame search region refinement, masking and biasing were introduced to exploit the spatial dependency between adjacent frames for the reduction of the processing time. Our segmentation algorithm was evaluated by comparing with the manual labelings and three state of the art graph-based segmentation methods. The processing time for the whole OCT volume of 496×644×51 voxels (captured by Spectralis SD-OCT) was 26.15 seconds which is at least a 2-8-fold increase in speed compared to other, similar reference algorithms used in the comparisons. The average unsigned error was about 1 pixel (∼ 4 microns), which was also lower compared to the reference algorithms. We believe that OCTRIMA 3D is a leap forward towards achieving reliable, real-time analysis of 3D OCT retinal data. PMID:26258430

  13. Real-time 3D Fourier-domain optical coherence tomography guided microvascular anastomosis

    NASA Astrophysics Data System (ADS)

    Huang, Yong; Ibrahim, Zuhaib; Lee, W. P. A.; Brandacher, Gerald; Kang, Jin U.

    2013-03-01

    Vascular and microvascular anastomosis is considered to be the foundation of plastic and reconstructive surgery, hand surgery, transplant surgery, vascular surgery and cardiac surgery. In the last two decades innovative techniques, such as vascular coupling devices, thermo-reversible poloxamers and suture-less cuff have been introduced. Intra-operative surgical guidance using a surgical imaging modality that provides in-depth view and 3D imaging can improve outcome following both conventional and innovative anastomosis techniques. Optical coherence tomography (OCT) is a noninvasive high-resolution (micron level), high-speed, 3D imaging modality that has been adopted widely in biomedical and clinical applications. In this work we performed a proof-of-concept evaluation study of OCT as an assisted intraoperative and post-operative imaging modality for microvascular anastomosis of rodent femoral vessels. The OCT imaging modality provided lateral resolution of 12 μm and 3.0 μm axial resolution in air and 0.27 volume/s imaging speed, which could provide the surgeon with clearly visualized vessel lumen wall and suture needle position relative to the vessel during intraoperative imaging. Graphics processing unit (GPU) accelerated phase-resolved Doppler OCT (PRDOCT) imaging of the surgical site was performed as a post-operative evaluation of the anastomosed vessels and to visualize the blood flow and thrombus formation. This information could help surgeons improve surgical precision in this highly challenging anastomosis of rodent vessels with diameter less than 0.5 mm. Our imaging modality could not only detect accidental suture through the back wall of lumen but also promptly diagnose and predict thrombosis immediately after reperfusion. Hence, real-time OCT can assist in decision-making process intra-operatively and avoid post-operative complications.

  14. Clinical development of BLZ-100 for real-time optical imaging of tumors during resection

    NASA Astrophysics Data System (ADS)

    Franklin, Heather L.; Miller, Dennis M.; Hedges, Teresa; Perry, Jeff; Parrish-Novak, Julia

    2016-03-01

    Complete initial resection can give cancer patients the best opportunity for long-term survival. There is unmet need in surgical oncology for optical imaging that enables simple and precise visualization of tumors and consistent contrast with surrounding normal tissues. Near-infrared (NIR) contrast agents and camera systems that can detect them represent an area of active research and development. The investigational Tumor Paint agent BLZ-100 is a conjugate of a chlorotoxin peptide and the NIR dye indocyanine green (ICG) that has been shown to specifically bind to a broad range of solid tumors. Clinical efficacy studies with BLZ-100 are in progress, a necessary step in bringing the product into clinical practice. To ensure a product that will be useful for and accepted by surgeons, the early clinical development of BLZ- 100 incorporates multiple tumor types and imaging devices so that surgeon feedback covers the range of anticipated clinical uses. Key contrast agent characteristics include safety, specificity, flexibility in timing between dose and surgery, and breadth of tumor types recognized. Imaging devices should use wavelengths that are optimal for the contrast agent, be sensitive enough that contrast agent dosing can be adjusted for optimal contrast, include real-time video display of fluorescence and white light image, and be simple for surgeons to use with minimal disruption of surgical flow. Rapid entry into clinical studies provides the best opportunity for early surgeon feedback, enabling development of agents and devices that will gain broad acceptance and provide information that helps surgeons achieve more complete and precise resections.

  15. Super continuum generation for real time ultrahigh resolution optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Nishizawa, Norihiko; Aguirre, Aaron D.; Fujimoto, James G.

    2006-02-01

    Optical coherence tomography (OCT) is an emerging technology for micrometer-scale, cross-sectional imaging of biological tissue and materials. One of the key limitations to achieving ultrahigh-resolution OCT imaging outside the laboratory setting has been the lack of compact, high-performance broadband light sources with sufficient power and stability to allow practical real-time imaging. The broad-bandwidth supercontinuum (SC) sources were recently demonstrated with femtosecond lasers in combination with nonlinear fibers. Using SC, we can demonstrate ultrahigh resolution OCT. However, wideband SC generally has large excess noise and significant fine structure. Low noise and smooth spectral shape are desired in the ideal supercontinnum source. In this paper, we describe recent studies on practical SC generation for ultrahigh-resolution OCT. SC generation is first analyzed both numerically and experimentally in terms of OCT imaging requirements and optimized conditions for generation are discussed. Supercontinua generated by use of highly nonlinear fiber which have a zero-dispersion wavelength near the pump wavelength, generally result in severe spectral modulation and fluctuating fine structure in the spectra. This spectral modulation produces sidelobes and reduced contrast in the interferometric point-spread function. In contrast, normally dispersive, highly nonlinear fibers (ND-HNFs) can generate smooth and Gaussian shaped supercontinua by the combination of self-phase modulation and normal dispersion. Low noise and wideband SC generation is demonstrated using ND-HNFs. Two colored SC generation is also demonstrated using a photonic crystal fiber which has two close zero dispersion wavelengths. The numerical results are almost in agreement with the experimental ones. Finally, low noise SC generation is demonstrated in an all fiber system based on an ultrashort pulse fiber laser. Wideband, low noise, near Gaussian shaped, high power SC is generated in the 1.55

  16. Real-Time Optical Monitoring of Flow Kinetics and Gas Phase Reactions Under High-Pressure OMCVD Conditions

    NASA Technical Reports Server (NTRS)

    Dietz, N.; McCall, S.; Bachmann, K. J.

    2001-01-01

    This contribution addresses the real-time optical characterization of gas flow and gas phase reactions as they play a crucial role for chemical vapor phase depositions utilizing elevated and high pressure chemical vapor deposition (HPCVD) conditions. The objectives of these experiments are to validate on the basis of results on real-time optical diagnostics process models simulation codes, and provide input parameter sets needed for analysis and control of chemical vapor deposition at elevated pressures. Access to microgravity is required to retain high pressure conditions of laminar flow, which is essential for successful acquisition and interpretation of the optical data. In this contribution, we describe the design and construction of the HPCVD system, which include access ports for various optical methods of real-time process monitoring and to analyze the initial stages of heteroepitaxy and steady-state growth in the different pressure ranges. To analyze the onset of turbulence, provisions are made for implementation of experimental methods for in-situ characterization of the nature of flow. This knowledge will be the basis for the design definition of experiments under microgravity, where gas flow conditions, gas phase and surface chemistry, might be analyzed by remote controlled real-time diagnostics tools, developed in this research project.

  17. Development of a hybrid Raman spectroscopy and optical coherence tomography technique for real-time in vivo tissue measurements.

    PubMed

    Wang, Jianfeng; Zheng, Wei; Lin, Kan; Huang, Zhiwei

    2016-07-01

    We report on the development of a unique sideview handheld hybrid Raman spectroscopy (RS) and optical coherence tomography (OCT) technique for real-time in vivo tissue measurements. A sideview handheld RS-OCT optical probe is designed to coalign the optical paths of RS and OCT sampling arms, whereby a compact long-pass dichroic mirror (LPDM) is utilized to transmit the OCT signal through a gradient index rod lens and a reflection mirror, whereas the LPDM deflects the tissue Raman signal by 90°, leading to coaligned RS/OCT optical samplings on the tissue. Further study shows that the hybrid RS and OCT technique developed is capable of simultaneously acquiring both morphological and biochemical information about the oral tissue in vivo, facilitating real-time, in vivo tissue diagnoses and characterizations in the oral cavity. PMID:27367097

  18. Near real-time monitoring systems for adaptive management and improved forest governance

    NASA Astrophysics Data System (ADS)

    Musinsky, J.; Tabor, K.; Cano, A.

    2012-12-01

    The destruction and degradation of the world's forests from deforestation, illegal logging and fire has wide-ranging environmental and economic impacts, including biodiversity loss, the degradation of ecosystem services and the emission of greenhouse gases. In an effort to strengthen local capacity to respond to these threats, Conservation International has developed a suite of near real-time satellite monitoring systems generating daily alerts, maps and reports of forest fire, fire risk, deforestation and degradation that are used by national and sub-national government agencies, NGO's, scientists, communities, and the media to respond to and report on threats to forest resources. Currently, the systems support more than 1000 subscribers from 45 countries, focusing on Madagascar, Indonesia, Bolivia and Peru. This presentation will explore the types of innovative applications users have found for these data, challenges they've encountered in data acquisition and accuracy, and feedback they've given on the usefulness of these systems for REDD+ implementation, protected areas management and improved forest governance.;

  19. Neuromorphic learning of continuous-valued mappings in the presence of noise: Application to real-time adaptive control

    NASA Technical Reports Server (NTRS)

    Troudet, Terry; Merrill, Walter C.

    1989-01-01

    The ability of feed-forward neural net architectures to learn continuous-valued mappings in the presence of noise is demonstrated in relation to parameter identification and real-time adaptive control applications. Factors and parameters influencing the learning performance of such nets in the presence of noise are identified. Their effects are discussed through a computer simulation of the Back-Error-Propagation algorithm by taking the example of the cart-pole system controlled by a nonlinear control law. Adequate sampling of the state space is found to be essential for canceling the effect of the statistical fluctuations and allowing learning to take place.

  20. Real-time depth-resolved fiber optic Raman endoscopy for in vivo diagnosis of gastric precancer

    NASA Astrophysics Data System (ADS)

    Bergholt, Mads S.; Zheng, Wei; Ho, Khek Yu; Yeoh, Khay Guan; Teh, Ming; So, Jimmy B. Y.; Huang, Zhiwei

    2014-03-01

    Raman spectroscopy represents a unique optical vibrational technique based on the fundamental premise of inelastic light scattering. Raman spectroscopy enables histopathological assessment at the biomolecular level. We have developed a fiber-optic depth-resolved near-infrared (NIR) Raman endoscopy technique integrated with on-line diagnostic algorithms for in vivo real-time epithelial diagnostics under multimodal wide-field imaging (i.e., white light reflectance (WLR), narrow-band imaging (NBI), autofluorescence imaging (AFI)) modalities. A selection of 450 patients who previously underwent Raman endoscopy (n=1900 spectra) was used to render diagnostic models for identifying gastric precancer (i.e., dysplasia) based on probabilistic partial least squares (PLS) - discriminant analysis (DA). The on-line Raman endoscopy technique was tested prospectively on (n=5) patients for real-time in vivo gastric epithelium tissue diagnosis. The fiber-optic confocal Raman endoscopic technique developed could prospectively identify gastric dysplasia in real-time with a sensitivity: 81.3% (61/75) and specificity 88.3% (188/213) on spectrum basis. On lesion basis, all dysplastic lesions were identified. This study successfully demonstrates for the first time the prospective real-time in vivo diagnosis of gastric precancer using depth-resolved Raman endoscopy.

  1. Real-Time Molecular Monitoring of Chemical Environment in ObligateAnaerobes during Oxygen Adaptive Response

    SciTech Connect

    Holman, Hoi-Ying N.; Wozei, Eleanor; Lin, Zhang; Comolli, Luis R.; Ball, David. A.; Borglin, Sharon; Fields, Matthew W.; Hazen, Terry C.; Downing, Kenneth H.

    2009-02-25

    Determining the transient chemical properties of the intracellular environment canelucidate the paths through which a biological system adapts to changes in its environment, for example, the mechanisms which enable some obligate anaerobic bacteria to survive a sudden exposure to oxygen. Here we used high-resolution Fourier Transform Infrared (FTIR) spectromicroscopy to continuously follow cellular chemistry within living obligate anaerobes by monitoring hydrogen bonding in their cellular water. We observed a sequence of wellorchestrated molecular events that correspond to changes in cellular processes in those cells that survive, but only accumulation of radicals in those that do not. We thereby can interpret the adaptive response in terms of transient intracellular chemistry and link it to oxygen stress and survival. This ability to monitor chemical changes at the molecular level can yield important insights into a wide range of adaptive responses.

  2. Real-time 3D adaptive filtering for portable imaging systems

    NASA Astrophysics Data System (ADS)

    Bockenbach, Olivier; Ali, Murtaza; Wainwright, Ian; Nadeski, Mark

    2015-03-01

    Portable imaging devices have proven valuable for emergency medical services both in the field and hospital environments and are becoming more prevalent in clinical settings where the use of larger imaging machines is impractical. 3D adaptive filtering is one of the most advanced techniques aimed at noise reduction and feature enhancement, but is computationally very demanding and hence often not able to run with sufficient performance on a portable platform. In recent years, advanced multicore DSPs have been introduced that attain high processing performance while maintaining low levels of power dissipation. These processors enable the implementation of complex algorithms like 3D adaptive filtering, improving the image quality of portable medical imaging devices. In this study, the performance of a 3D adaptive filtering algorithm on a digital signal processor (DSP) is investigated. The performance is assessed by filtering a volume of size 512x256x128 voxels sampled at a pace of 10 MVoxels/sec.

  3. Real-Time Observations of Optical Properties of Arctic Sea Ice with an Autonomous System

    NASA Astrophysics Data System (ADS)

    Wang, C.; Gerland, S.; Nicolaus, M.; Granskog, M. A.; Hudson, S. R.; Perovich, D. K.; Karlsen, T. I.; Fossan, K.

    2012-12-01

    The recent drastic changes in the Arctic sea ice cover have altered the interaction of solar radiation and sea ice. To improve our understanding of this interaction, a Spectral Radiation Buoy (SRB) for measuring sea ice optical properties was developed, based on a system used during the last International Polar Year at the drift of "Tara" across the Arctic Ocean. A first version of the SRB was deployed on drifting ice in the high Arctic in April 2012. It includes three Satlantic spectral radiometers (two in air, one under ice), covering the wavelength range from 347 nm to 804 nm with 3.3 nm spectral resolution, a bio-shutter to protect the under-ice radiometer, a data logger to handle and store collected data, and an Iridium satellite modem to transfer data in real-time. The under-ice radiometer is mounted on an adjustable under-ice arm, and the other instruments are mounted on a triangular frame frozen into the ice. The SRB measures simultaneously, autonomously and continuously the spectral fluxes of incident and reflected solar radiation, as well as under-ice irradiance, water temperature and water pressure every hour. So far, between mid April and early August 2012, the system has drifted about 600 km, from the starting position near the North Pole towards the Fram Strait. The data collected during this deployment, so far, already demonstrate that this system is suitable for autonomous and long-term observations over and under sea ice in harsh conditions. Along with the SRB, commercially available Ice Mass Balance buoys (IMB) were deployed on the same ice floe. In the vicinity of the site, manned baseline measurements of snow and sea ice physical properties have been carried out during the SRB deployment. The combined datasets allow description of the evolution of the ice floe during seasonal melt. With snow melt, the spectral surface albedo decreased and the transmittance through the snow and ice increased after mid-April, especially when melt ponds started to

  4. Real-Time Feedback Control of Flow-Induced Cavity Tones. Part 2; Adaptive Control

    NASA Technical Reports Server (NTRS)

    Kegerise, M. A.; Cabell, R. H.; Cattafesta, L. N., III

    2006-01-01

    An adaptive generalized predictive control (GPC) algorithm was formulated and applied to the cavity flow-tone problem. The algorithm employs gradient descent to update the GPC coefficients at each time step. Past input-output data and an estimate of the open-loop pulse response sequence are all that is needed to implement the algorithm for application at fixed Mach numbers. Transient measurements made during controller adaptation revealed that the controller coefficients converged to a steady state in the mean, and this implies that adaptation can be turned off at some point with no degradation in control performance. When converged, the control algorithm demonstrated multiple Rossiter mode suppression at fixed Mach numbers ranging from 0.275 to 0.38. However, as in the case of fixed-gain GPC, the adaptive GPC performance was limited by spillover in sidebands around the suppressed Rossiter modes. The algorithm was also able to maintain suppression of multiple cavity tones as the freestream Mach number was varied over a modest range (0.275 to 0.29). Beyond this range, stable operation of the control algorithm was not possible due to the fixed plant model in the algorithm.

  5. Real-Time Tracking Framework with Adaptive Features and Constrained Labels.

    PubMed

    Li, Daqun; Xu, Tingfa; Chen, Shuoyang; Zhang, Jizhou; Jiang, Shenwang

    2016-01-01

    This paper proposes a novel tracking framework with adaptive features and constrained labels (AFCL) to handle illumination variation, occlusion and appearance changes caused by the variation of positions. The novel ensemble classifier, including the Forward-Backward error and the location constraint is applied, to get the precise coordinates of the promising bounding boxes. The Forward-Backward error can enhance the adaptation and accuracy of the binary features, whereas the location constraint can overcome the label noise to a certain degree. We use the combiner which can evaluate the online templates and the outputs of the classifier to accommodate the complex situation. Evaluation of the widely used tracking benchmark shows that the proposed framework can significantly improve the tracking accuracy, and thus reduce the processing time. The proposed framework has been tested and implemented on the embedded system using TMS320C6416 and Cyclone Ⅲ kernel processors. The outputs show that achievable and satisfying results can be obtained. PMID:27618052

  6. A dosimetric comparison of real-time adaptive and non-adaptive radiotherapy: A multi-institutional study encompassing robotic, gimbaled, multileaf collimator and couch tracking

    PubMed Central

    Colvill, Emma; Booth, Jeremy; Nill, Simeon; Fast, Martin; Bedford, James; Oelfke, Uwe; Nakamura, Mitsuhiro; Poulsen, Per; Worm, Esben; Hansen, Rune; Ravkilde, Thomas; Scherman Rydhög, Jonas; Pommer, Tobias; Munck af Rosenschold, Per; Lang, Stephanie; Guckenberger, Matthias; Groh, Christian; Herrmann, Christian; Verellen, Dirk; Poels, Kenneth; Wang, Lei; Hadsell, Michael; Sothmann, Thilo; Blanck, Oliver; Keall, Paul

    2016-01-01

    Purpose A study of real-time adaptive radiotherapy systems was performed to test the hypothesis that, across delivery systems and institutions, the dosimetric accuracy is improved with adaptive treatments over non-adaptive radiotherapy in the presence of patient-measured tumor motion. Methods and materials Ten institutions with robotic(2), gimbaled(2), MLC(4) or couch tracking(2) used common materials including CT and structure sets, motion traces and planning protocols to create a lung and a prostate plan. For each motion trace, the plan was delivered twice to a moving dosimeter; with and without real-time adaptation. Each measurement was compared to a static measurement and the percentage of failed points for γ-tests recorded. Results For all lung traces all measurement sets show improved dose accuracy with a mean 2%/2 mm γ-fail rate of 1.6% with adaptation and 15.2% without adaptation (p < 0.001). For all prostate the mean 2%/2 mm γ-fail rate was 1.4% with adaptation and 17.3% without adaptation (p < 0.001). The difference between the four systems was small with an average 2%/2 mm γ-fail rate of <3% for all systems with adaptation for lung and prostate. Conclusions The investigated systems all accounted for realistic tumor motion accurately and performed to a similar high standard, with real-time adaptation significantly outperforming non-adaptive delivery methods. PMID:27016171

  7. Closed-loop optical stimulation and recording system with GPU-based real-time spike sorting

    NASA Astrophysics Data System (ADS)

    Wang, Ling; Nguyen, Thoa; Cabral, Henrique; Gysbrechts, Barbara; Battaglia, Francesco; Bartic, Carmen

    2014-05-01

    Closed-loop brain computer interfaces are rapidly progressing due to their applications in fundamental neuroscience and prosthetics. For optogenetic experiments, the integration of optical stimulation and electrophysiological recordings is emerging as an imperative engineering research topic. Optical stimulation does not only bring the advantage of cell-type selectivity, but also provides an alternative solution to the electrical stimulation-induced artifacts, a challenge in closedloop architectures. A closed-loop system must identify the neuronal signals in real-time such that a strategy is selected immediately (within a few milliseconds) for delivering stimulation patterns. Real-time spike sorting poses important challenges especially when a large number of recording channels are involved. Here we present a prototype allowing simultaneous optical stimulation and electro-physiological recordings in a closed-loop manner. The prototype was implemented with online spike detection and classification capabilities for selective cell stimulation. Real-time spike sorting was achieved by computations with a high speed, low cost graphic processing unit (GPU). We have successfully demonstrated the closed-loop operation, i.e. optical stimulation in vivo based on spike detection from 8 tetrodes (32 channels). The performance of GPU computation in spike sorting for different channel numbers and signal lengths was also investigated.

  8. Graphics processing unit-accelerated real-time compressive sensing spectral domain optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Xu, Daguang; Huang, Yong; Kang, Jin U.

    2015-03-01

    In this paper, we systematically demonstrate two real-time CS SD OCT systems based on a conventional desktop having three GPUs. The first one takes fast Fourier transform (FFT) as the sensing technique and under-sampled linear wavenumber spectral sampling as input data, while the second one uses non-uniform fast Fourier transform (NUFFT) and under-sampled nonlinear wavenumber spectral sampling, respectively. The maximum reconstruction speed of 72k and 33.5k A-line/s were achieved for these two systems, respectively, with A-scan size 2048. It is >100 times faster than the C++ implementation and >400 times faster than the MATLAB implementation. Finally, we present real-time dispersion compensated image reconstruction for both systems.

  9. Real-Time Adaptive Control of Flow-Induced Cavity Tones

    NASA Technical Reports Server (NTRS)

    Kegerise, Michael A.; Cabell, Randolph H.; Cattafesta, Louis N.

    2004-01-01

    An adaptive generalized predictive control (GPC) algorithm was formulated and applied to the cavity flow-tone problem. The algorithm employs gradient descent to update the GPC coefficients at each time step. The adaptive control algorithm demonstrated multiple Rossiter mode suppression at fixed Mach numbers ranging from 0.275 to 0.38. The algorithm was also able t o maintain suppression of multiple cavity tones as the freestream Mach number was varied over a modest range (0.275 to 0.29). Controller performance was evaluated with a measure of output disturbance rejection and an input sensitivity transfer function. The results suggest that disturbances entering the cavity flow are colocated with the control input at the cavity leading edge. In that case, only tonal components of the cavity wall-pressure fluctuations can be suppressed and arbitrary broadband pressure reduction is not possible. In the control-algorithm development, the cavity dynamics are treated as linear and time invariant (LTI) for a fixed Mach number. The experimental results lend support this treatment.

  10. A self-adaptive parameter optimization algorithm in a real-time parallel image processing system.

    PubMed

    Li, Ge; Zhang, Xuehe; Zhao, Jie; Zhang, Hongli; Ye, Jianwei; Zhang, Weizhe

    2013-01-01

    Aiming at the stalemate that precision, speed, robustness, and other parameters constrain each other in the parallel processed vision servo system, this paper proposed an adaptive load capacity balance strategy on the servo parameters optimization algorithm (ALBPO) to improve the computing precision and to achieve high detection ratio while not reducing the servo circle. We use load capacity functions (LC) to estimate the load for each processor and then make continuous self-adaptation towards a balanced status based on the fluctuated LC results; meanwhile, we pick up a proper set of target detection and location parameters according to the results of LC. Compared with current load balance algorithm, the algorithm proposed in this paper is proceeded under an unknown informed status about the maximum load and the current load of the processors, which means it has great extensibility. Simulation results showed that the ALBPO algorithm has great merits on load balance performance, realizing the optimization of QoS for each processor, fulfilling the balance requirements of servo circle, precision, and robustness of the parallel processed vision servo system. PMID:24174920

  11. Real-time optical gating for three-dimensional beating heart imaging

    NASA Astrophysics Data System (ADS)

    Taylor, Jonathan M.; Saunter, Christopher D.; Love, Gordon D.; Girkin, John M.; Henderson, Deborah J.; Chaudhry, Bill

    2011-11-01

    We demonstrate real-time microscope image gating to an arbitrary position in the cycle of the beating heart of a zebrafish embryo. We show how this can be used for high-precision prospective gating of fluorescence image slices of the moving heart. We also present initial results demonstrating the application of this technique to 3-D structural imaging of the beating embryonic heart.

  12. High dynamic range adaptive real-time smart camera: an overview of the HDR-ARTiST project

    NASA Astrophysics Data System (ADS)

    Lapray, Pierre-Jean; Heyrman, Barthélémy; Ginhac, Dominique

    2015-04-01

    Standard cameras capture only a fraction of the information that is visible to the human visual system. This is specifically true for natural scenes including areas of low and high illumination due to transitions between sunlit and shaded areas. When capturing such a scene, many cameras are unable to store the full Dynamic Range (DR) resulting in low quality video where details are concealed in shadows or washed out by sunlight. The imaging technique that can overcome this problem is called HDR (High Dynamic Range) imaging. This paper describes a complete smart camera built around a standard off-the-shelf LDR (Low Dynamic Range) sensor and a Virtex-6 FPGA board. This smart camera called HDR-ARtiSt (High Dynamic Range Adaptive Real-time Smart camera) is able to produce a real-time HDR live video color stream by recording and combining multiple acquisitions of the same scene while varying the exposure time. This technique appears as one of the most appropriate and cheapest solution to enhance the dynamic range of real-life environments. HDR-ARtiSt embeds real-time multiple captures, HDR processing, data display and transfer of a HDR color video for a full sensor resolution (1280 1024 pixels) at 60 frames per second. The main contributions of this work are: (1) Multiple Exposure Control (MEC) dedicated to the smart image capture with alternating three exposure times that are dynamically evaluated from frame to frame, (2) Multi-streaming Memory Management Unit (MMMU) dedicated to the memory read/write operations of the three parallel video streams, corresponding to the different exposure times, (3) HRD creating by combining the video streams using a specific hardware version of the Devebecs technique, and (4) Global Tone Mapping (GTM) of the HDR scene for display on a standard LCD monitor.

  13. Highly Dynamic and Adaptive Traffic Congestion Avoidance in Real-Time Inspired by Honey Bee Behavior

    NASA Astrophysics Data System (ADS)

    Wedde, Horst F.; Lehnhoff, Sebastian; van Bonn, Bernhard; Bay, Z.; Becker, S.; Böttcher, S.; Brunner, C.; Büscher, A.; Fürst, T.; Lazarescu, A. M.; Rotaru, E.; Senge, S.; Steinbach, B.; Yilmaz, F.; Zimmermann, T.

    Traffic congestions have become a major problem in metropolitan areas world-wide, within and between cities, to an extent where they make driving and transportation times largely unpredictable. Due to the highly dynamic character of congestion building and dissolving this phenomenon appears even to resist a formal treatment. Static approaches, and even more their global management, have proven counterproductive in practice. Given the latest progress in VANET technology and the remarkable commercially driven efforts like in the European C2C consortium, or the VSC Project in the US, allow meanwhile to tackle various aspects of traffic regulation through VANET communication. In this paper we introduce a novel, completely decentralized multi-agent routing algorithm (termed BeeJamA) which we have derived from the foraging behavior of honey bees. It is highly dynamic, adaptive, robust, and scalable, and it allows for both avoiding congestions, and minimizing traveling times to individual destinations. Vehicle guidance is provided well ahead of every intersection, depending on the individual speeds. Thus strict deadlines are imposed on, and respected by, the BeeJamA algorithm. We report on extensive simulation experiments which show the superior performance of BeeJamA over conventional approaches.

  14. Ensemble framework based real-time respiratory motion prediction for adaptive radiotherapy applications.

    PubMed

    Tatinati, Sivanagaraja; Nazarpour, Kianoush; Tech Ang, Wei; Veluvolu, Kalyana C

    2016-08-01

    Successful treatment of tumors with motion-adaptive radiotherapy requires accurate prediction of respiratory motion, ideally with a prediction horizon larger than the latency in radiotherapy system. Accurate prediction of respiratory motion is however a non-trivial task due to the presence of irregularities and intra-trace variabilities, such as baseline drift and temporal changes in fundamental frequency pattern. In this paper, to enhance the accuracy of the respiratory motion prediction, we propose a stacked regression ensemble framework that integrates heterogeneous respiratory motion prediction algorithms. We further address two crucial issues for developing a successful ensemble framework: (1) selection of appropriate prediction methods to ensemble (level-0 methods) among the best existing prediction methods; and (2) finding a suitable generalization approach that can successfully exploit the relative advantages of the chosen level-0 methods. The efficacy of the developed ensemble framework is assessed with real respiratory motion traces acquired from 31 patients undergoing treatment. Results show that the developed ensemble framework improves the prediction performance significantly compared to the best existing methods. PMID:27238760

  15. Automatic Near-Real-Time Image Processing Chain for Very High Resolution Optical Satellite Data

    NASA Astrophysics Data System (ADS)

    Ostir, K.; Cotar, K.; Marsetic, A.; Pehani, P.; Perse, M.; Zaksek, K.; Zaletelj, J.; Rodic, T.

    2015-04-01

    In response to the increasing need for automatic and fast satellite image processing SPACE-SI has developed and implemented a fully automatic image processing chain STORM that performs all processing steps from sensor-corrected optical images (level 1) to web-delivered map-ready images and products without operator's intervention. Initial development was tailored to high resolution RapidEye images, and all crucial and most challenging parts of the planned full processing chain were developed: module for automatic image orthorectification based on a physical sensor model and supported by the algorithm for automatic detection of ground control points (GCPs); atmospheric correction module, topographic corrections module that combines physical approach with Minnaert method and utilizing anisotropic illumination model; and modules for high level products generation. Various parts of the chain were implemented also for WorldView-2, THEOS, Pleiades, SPOT 6, Landsat 5-8, and PROBA-V. Support of full-frame sensor currently in development by SPACE-SI is in plan. The proposed paper focuses on the adaptation of the STORM processing chain to very high resolution multispectral images. The development concentrated on the sub-module for automatic detection of GCPs. The initially implemented two-step algorithm that worked only with rasterized vector roads and delivered GCPs with sub-pixel accuracy for the RapidEye images, was improved with the introduction of a third step: super-fine positioning of each GCP based on a reference raster chip. The added step exploits the high spatial resolution of the reference raster to improve the final matching results and to achieve pixel accuracy also on very high resolution optical satellite data.

  16. Excited-State Absorption from Real-Time Time-Dependent Density Functional Theory: Optical Limiting in Zinc Phthalocyanine.

    PubMed

    Fischer, Sean A; Cramer, Christopher J; Govind, Niranjan

    2016-04-01

    Optical-limiting materials are capable of attenuating light to protect delicate equipment from high-intensity light sources. Phthalocyanines have attracted a lot of attention for optical-limiting applications due to their versatility and large nonlinear absorption. With excited-state absorption (ESA) being the primary mechanism for optical limiting behavior in phthalocyanines, the ability to tune the optical absorption of ground and excited states in phthalocyanines would allow for the development of advanced optical limiters. We recently developed a method for the calculation of ESA based on real-time time-dependent density functional theory propagation of an excited-state density. In this work, we apply the approach to zinc phthalocyanine, demonstrating the ability of our method to efficiently identify the optical limiting potential of a molecular complex. PMID:27007445

  17. Using dual-energy x-ray imaging to enhance automated lung tumor tracking during real-time adaptive radiotherapy

    SciTech Connect

    Menten, Martin J. Fast, Martin F.; Nill, Simeon; Oelfke, Uwe

    2015-12-15

    Purpose: Real-time, markerless localization of lung tumors with kV imaging is often inhibited by ribs obscuring the tumor and poor soft-tissue contrast. This study investigates the use of dual-energy imaging, which can generate radiographs with reduced bone visibility, to enhance automated lung tumor tracking for real-time adaptive radiotherapy. Methods: kV images of an anthropomorphic breathing chest phantom were experimentally acquired and radiographs of actual lung cancer patients were Monte-Carlo-simulated at three imaging settings: low-energy (70 kVp, 1.5 mAs), high-energy (140 kVp, 2.5 mAs, 1 mm additional tin filtration), and clinical (120 kVp, 0.25 mAs). Regular dual-energy images were calculated by weighted logarithmic subtraction of high- and low-energy images and filter-free dual-energy images were generated from clinical and low-energy radiographs. The weighting factor to calculate the dual-energy images was determined by means of a novel objective score. The usefulness of dual-energy imaging for real-time tracking with an automated template matching algorithm was investigated. Results: Regular dual-energy imaging was able to increase tracking accuracy in left–right images of the anthropomorphic phantom as well as in 7 out of 24 investigated patient cases. Tracking accuracy remained comparable in three cases and decreased in five cases. Filter-free dual-energy imaging was only able to increase accuracy in 2 out of 24 cases. In four cases no change in accuracy was observed and tracking accuracy worsened in nine cases. In 9 out of 24 cases, it was not possible to define a tracking template due to poor soft-tissue contrast regardless of input images. The mean localization errors using clinical, regular dual-energy, and filter-free dual-energy radiographs were 3.85, 3.32, and 5.24 mm, respectively. Tracking success was dependent on tumor position, tumor size, imaging beam angle, and patient size. Conclusions: This study has highlighted the influence of

  18. Locally connected adaptive Gabor filter for real-time motion compensation

    NASA Astrophysics Data System (ADS)

    Li, Hau

    1994-07-01

    Software has been developed to implement the Gabor motion detection algorithm. This software consists of utility functions, algorithm modules, and test pattern generators for the experiments and verification of the spatial and temporal selectivity. Based on the theoretical analysis, the optical flow was computed for several artificially generated test patterns. These test patterns are designed to test the concept of spatial and orientation selectivity. The patterns were generated by using virtual reality technique based on three-dimensional computer graphics. In addition to the algorithm development and verification, we have also started work on the design and verification of the electronics basic building blocks for the VLSI implementation. This early start of the hardware design concurrent with the algorithm analysis and verification will further ensure the quality of the work in both hardware and software. In order to benchmark the VLSI chips, a hardware prototype board is under design and construction. This board will be used to compare the performance of digital approach vs. analog approach, analog approach based on the standard off-the-shelf components vs. analog customer-design VLSI approach.

  19. Diffusion-sensitive optical coherence tomography for real-time monitoring of mucus thinning treatments

    NASA Astrophysics Data System (ADS)

    Blackmon, Richard L.; Kreda, Silvia M.; Sears, Patrick R.; Ostrowski, Lawrence E.; Hill, David B.; Chapman, Brian S.; Tracy, Joseph B.; Oldenburg, Amy L.

    2016-03-01

    Mucus hydration (wt%) has become an increasingly useful metric in real-time assessment of respiratory health in diseases like cystic fibrosis and COPD, with higher wt% indicative of diseased states. However, available in vivo rheological techniques are lacking. Gold nanorods (GNRs) are attractive biological probes whose diffusion through tissue is sensitive to the correlation length of comprising biopolymers. Through employment of dynamic light scattering theory on OCT signals from GNRs, we find that weakly-constrained GNR diffusion predictably decreases with increasing wt% (more disease-like) mucus. Previously, we determined this method is robust against mucus transport on human bronchial epithelial (hBE) air-liquid interface cultures (R2=0.976). Here we introduce diffusion-sensitive OCT (DS-OCT), where we collect M-mode image ensembles, from which we derive depth- and temporally-resolved GNR diffusion rates. DS-OCT allows for real-time monitoring of changing GNR diffusion as a result of topically applied mucus-thinning agents, enabling monitoring of the dynamics of mucus hydration never before seen. Cultured human airway epithelial cells (Calu-3 cell) with a layer of endogenous mucus were doped with topically deposited GNRs (80x22nm), and subsequently treated with hypertonic saline (HS) or isotonic saline (IS). DS-OCT provided imaging of the mucus thinning response up to a depth of 600μm with 4.65μm resolution, over a total of 8 minutes in increments of >=3 seconds. For both IS and HS conditions, DS-OCT captured changes in the pattern of mucus hydration over time. DS-OCT opens a new window into understanding mechanisms of mucus thinning during treatment, enabling real-time efficacy feedback needed to optimize and tailor treatments for individual patients.

  20. Real-Time Wastewater System Operational Strategy Adaptation for Rainfall Variability

    NASA Astrophysics Data System (ADS)

    Zimmer, A. L.; Minsker, B. S.; Schmidt, A.; Ostfeld, A.; Treinish, L. A.

    2010-12-01

    Management strategies for many large-scale wastewater systems are based on longstanding rules and may not effectively utilize system capacity for every storm event. Conservative operational rules are established to prevent flow instabilities. However, the rules may be modified to retain more wastewater and reduce overflows while continuing to avoid hydraulic conditions that lead to transients. Possible adaptation of system decision rules can be evaluated through coupling radar rainfall, a hydrologic system model, and an optimization routine. In this study, genetic algorithm optimization is evaluated for a hydrologic test case modeled after the Chicago Tunnel and Reservoir Plan (TARP) that minimizes combined sewer overflow (CSO) discharge to nearby waterways. This approach identifies potential new operational rules that reliably utilize deep tunnel storage and reduce overflows for a variety of historic storm events. The study utilizes a model based on the portion of the TARP deep tunnel system that flows directly under the North Branch of the Chicago River. Potential overflows coming from the upstream pipe and interceptor system are directed into the deep tunnel through sluice gates. System decision variables consist of sluice gate positions that control whether water enters the deep tunnel or flows into the river, as well as a treatment plant pumping rate on the interceptor lines. For different optimization runs, modifications are made to existing hydraulic structures to evaluate solution robustness for comparable hydraulic systems. The operational objective is to minimize the total volume of overflows for each storm event through a decision sequence, generated at discretized intervals, within a model predictive control (MPC) framework. Current operational strategies restrict water entry to the deep tunnel when an averaged tunnel water level reaches 70 percent of the diameter to avoid hydraulic transients. The optimization routine implements constraints that

  1. Task-oriented quality assessment and adaptation in real-time mission critical video streaming applications

    NASA Astrophysics Data System (ADS)

    Nightingale, James; Wang, Qi; Grecos, Christos

    2015-02-01

    In recent years video traffic has become the dominant application on the Internet with global year-on-year increases in video-oriented consumer services. Driven by improved bandwidth in both mobile and fixed networks, steadily reducing hardware costs and the development of new technologies, many existing and new classes of commercial and industrial video applications are now being upgraded or emerging. Some of the use cases for these applications include areas such as public and private security monitoring for loss prevention or intruder detection, industrial process monitoring and critical infrastructure monitoring. The use of video is becoming commonplace in defence, security, commercial, industrial, educational and health contexts. Towards optimal performances, the design or optimisation in each of these applications should be context aware and task oriented with the characteristics of the video stream (frame rate, spatial resolution, bandwidth etc.) chosen to match the use case requirements. For example, in the security domain, a task-oriented consideration may be that higher resolution video would be required to identify an intruder than to simply detect his presence. Whilst in the same case, contextual factors such as the requirement to transmit over a resource-limited wireless link, may impose constraints on the selection of optimum task-oriented parameters. This paper presents a novel, conceptually simple and easily implemented method of assessing video quality relative to its suitability for a particular task and dynamically adapting videos streams during transmission to ensure that the task can be successfully completed. Firstly we defined two principle classes of tasks: recognition tasks and event detection tasks. These task classes are further subdivided into a set of task-related profiles, each of which is associated with a set of taskoriented attributes (minimum spatial resolution, minimum frame rate etc.). For example, in the detection class

  2. Real-time three-dimensional optical coherence tomography image-guided core-needle biopsy system

    PubMed Central

    Kuo, Wei-Cheng; Kim, Jongsik; Shemonski, Nathan D.; Chaney, Eric J.; Spillman, Darold R.; Boppart, Stephen A.

    2012-01-01

    Advances in optical imaging modalities, such as optical coherence tomography (OCT), enable us to observe tissue microstructure at high resolution and in real time. Currently, core-needle biopsies are guided by external imaging modalities such as ultrasound imaging and x-ray computed tomography (CT) for breast and lung masses, respectively. These image-guided procedures are frequently limited by spatial resolution when using ultrasound imaging, or by temporal resolution (rapid real-time feedback capabilities) when using x-ray CT. One feasible approach is to perform OCT within small gauge needles to optically image tissue microstructure. However, to date, no system or core-needle device has been developed that incorporates both three-dimensional OCT imaging and tissue biopsy within the same needle for true OCT-guided core-needle biopsy. We have developed and demonstrate an integrated core-needle biopsy system that utilizes catheter-based 3-D OCT for real-time image-guidance for target tissue localization, imaging of tissue immediately prior to physical biopsy, and subsequent OCT imaging of the biopsied specimen for immediate assessment at the point-of-care. OCT images of biopsied ex vivo tumor specimens acquired during core-needle placement are correlated with corresponding histology, and computational visualization of arbitrary planes within the 3-D OCT volumes enables feedback on specimen tissue type and biopsy quality. These results demonstrate the potential for using real-time 3-D OCT for needle biopsy guidance by imaging within the needle and tissue during biopsy procedures. PMID:22741064

  3. A Real-Time Capable Software-Defined Receiver Using GPU for Adaptive Anti-Jam GPS Sensors

    PubMed Central

    Seo, Jiwon; Chen, Yu-Hsuan; De Lorenzo, David S.; Lo, Sherman; Enge, Per; Akos, Dennis; Lee, Jiyun

    2011-01-01

    Due to their weak received signal power, Global Positioning System (GPS) signals are vulnerable to radio frequency interference. Adaptive beam and null steering of the gain pattern of a GPS antenna array can significantly increase the resistance of GPS sensors to signal interference and jamming. Since adaptive array processing requires intensive computational power, beamsteering GPS receivers were usually implemented using hardware such as field-programmable gate arrays (FPGAs). However, a software implementation using general-purpose processors is much more desirable because of its flexibility and cost effectiveness. This paper presents a GPS software-defined radio (SDR) with adaptive beamsteering capability for anti-jam applications. The GPS SDR design is based on an optimized desktop parallel processing architecture using a quad-core Central Processing Unit (CPU) coupled with a new generation Graphics Processing Unit (GPU) having massively parallel processors. This GPS SDR demonstrates sufficient computational capability to support a four-element antenna array and future GPS L5 signal processing in real time. After providing the details of our design and optimization schemes for future GPU-based GPS SDR developments, the jamming resistance of our GPS SDR under synthetic wideband jamming is presented. Since the GPS SDR uses commercial-off-the-shelf hardware and processors, it can be easily adopted in civil GPS applications requiring anti-jam capabilities. PMID:22164116

  4. Imaging the Ocular Anterior Segment With Real-Time, Full-Range Fourier-Domain Optical Coherence Tomography

    PubMed Central

    Sarunic, Marinko V.; Asrani, Sanjay; Izatt, Joseph A.

    2009-01-01

    We have demonstrated a novel Fourier-domain optical coherence tomography system and signal-processing algorithm for full-range, real-time, artifact-free quantitative imaging of the anterior chamber. Cross-sectional full-range images comprising 1024×800 pixels (axial×lateral) were acquired and displayed at 6.7 images/s. Volumetric data comprising 1024×400×60 pixels (axial×lateral×elevation) were acquired in 4.5 seconds with real-time visualization of individual slices and 3-dimensional reconstruction performed in postprocessing. Details of the cornea, limbus, iris, anterior lens capsule, trabecular meshwork, and Schlemm’s canal were visualized. Quantitative surface height maps of the corneal epithelium and endothelium were obtained from the volumetric data and used to generate corneal thickness maps. PMID:18413525

  5. Optical Spectrum Analysis of Real-Time TDDFT Using the Maximum Entropy Method

    NASA Astrophysics Data System (ADS)

    Toogoshi, M.; Kato, M.; Kano, S. S.; Zempo, Y.

    2014-05-01

    In the calculation of time-dependent density-functional theory in real time, we apply an external field to perturb the optimized electronic structure, and follow the time evolution of the dipole moment to calculate the oscillator strength distribution. We solve the time-dependent equation of motion, keeping track of the dipole moment as time-series data. We adopt Burg's maximum entropy method (MEM) to compute the spectrum of the oscillator strength, and apply this technique to several molecules. We find that MEM provides the oscillator strength distribution at high resolution even with a half of the evolution time of a simple FFT of the dynamic dipole moment. In this paper we show the effectiveness and efficiency of MEM in comparison with that of FFT. Not only the total number of time steps, but also the length of the autocorrelation, the lag, plays an important role in improving the resolution of the spectrum.

  6. Chemically unassisted phototherapy: dose effects via real-time optical monitoring of cancer cells

    NASA Astrophysics Data System (ADS)

    Landry, Sylvie; Keeler, Werden

    2010-03-01

    Ultraviolet (UV) light and short wavelength visible (VIS) light have been used to kill pathogens for many years. Although the adverse effects of UV radiation on living cells have been extensively studied using biochemical and biomolecular techniques, most of the light therapies used for medical treatment are chemically assisted (i.e., photodynamic therapy). However, the use of light alone could prove both cost and therapeutically effective as an alternative treatment modality for localized diseases. In this study, real-time oblique incidence reflection (OIR) microscopy and image analysis were used to visualize and quantify the effects of chemically unassisted light therapy on untagged live cancer cells in vitro. The incident radiation fluence (in mJ/cm^2) required to induce cell death was determined for selected quasi-monochromatic UV to VIS wavelengths ranging from 275nm to 460nm. A predictive mathematical equation quantifying the lethal fluence as a function of wavelength will be discussed.

  7. Real-time experimental demonstrations of software reconfigurable optical OFDM transceivers utilizing DSP-based digital orthogonal filters for SDN PONs.

    PubMed

    Duan, X; Giddings, R P; Bolea, M; Ling, Y; Cao, B; Mansoor, S; Tang, J M

    2014-08-11

    Real-time optical OFDM (OOFDM) transceivers with on-line software-controllable channel reconfigurability and transmission performance adaptability are experimentally demonstrated, for the first time, utilizing Hilbert-pair-based 32-tap digital orthogonal filters implemented in FPGAs. By making use of an 8-bit DAC/ADC operating at 2GS/s, an oversampling factor of 2 and an EML intensity modulator, the demonstrated RF conversion-free transceiver supports end-to-end real-time simultaneous adaptive transmissions, within a 1GHz signal spectrum region, of a 2.03Gb/s in-phase OOFDM channel and a 1.41Gb/s quadrature-phase OOFDM channel over a 25km SSMF IMDD system. In addition, detailed experimental explorations are also undertaken of key physical mechanisms limiting the maximum achievable transmission performance, impacts of transceiver's channel multiplexing/demultiplexing operations on the system BER performance, and the feasibility of utilizing adaptive modulation to combat impairments associated with low-complexity digital filter designs. Furthermore, experimental results indicate that the transceiver incorporating a fixed digital orthogonal filter DSP architecture can be made transparent to various signal modulation formats up to 64-QAM. PMID:25321051

  8. An optical super-microscope for far-field, real-time imaging beyond the diffraction limit.

    PubMed

    Wong, Alex M H; Eleftheriades, George V

    2013-01-01

    Optical microscopy suffers from a fundamental resolution limitation arising from the diffractive nature of light. While current solutions to sub-diffraction optical microscopy involve combinations of near-field, non-linear and fine scanning operations, we hereby propose and demonstrate the optical super-microscope (OSM) - a superoscillation-based linear imaging system with far-field working and observation distances - which can image an object in real-time and with sub-diffraction resolution. With our proof-of-principle prototype we report a point spread function with a spot size clearly reduced from the diffraction limit, and demonstrate corresponding improvements in two-point resolution experiments. Harnessing a new understanding of superoscillations, based on antenna array theory, our OSM achieves far-field, sub-diffraction optical imaging of an object without the need for fine scanning, data post-processing or object pre-treatment. Hence the OSM can be used in a wide variety of imaging applications beyond the diffraction limit, including real-time imaging of moving objects. PMID:23612684

  9. An Optical Super-Microscope for Far-field, Real-time Imaging Beyond the Diffraction Limit

    PubMed Central

    Wong, Alex M. H.; Eleftheriades, George V.

    2013-01-01

    Optical microscopy suffers from a fundamental resolution limitation arising from the diffractive nature of light. While current solutions to sub-diffraction optical microscopy involve combinations of near-field, non-linear and fine scanning operations, we hereby propose and demonstrate the optical super-microscope (OSM) – a superoscillation-based linear imaging system with far-field working and observation distances – which can image an object in real-time and with sub-diffraction resolution. With our proof-of-principle prototype we report a point spread function with a spot size clearly reduced from the diffraction limit, and demonstrate corresponding improvements in two-point resolution experiments. Harnessing a new understanding of superoscillations, based on antenna array theory, our OSM achieves far-field, sub-diffraction optical imaging of an object without the need for fine scanning, data post-processing or object pre-treatment. Hence the OSM can be used in a wide variety of imaging applications beyond the diffraction limit, including real-time imaging of moving objects. PMID:23612684

  10. Sensitive fiber optics-based system for real-time detection of PCR-amplified DNA using molecular beacons

    NASA Astrophysics Data System (ADS)

    Reid, Taylor A.; Cayouette, Michelle; Brown, Larry; Mousavi, Ali R.; Slaney, John; Moores, Jane

    1999-05-01

    Molecular Beacon hairpin shaped fluorescent oligonucleotide probes are powerful tools for quantifying specific nucleic acid sequences. Stratagene is developing a sensitive system, using these probes, for detecting and quantifying initial template copy number of nucleic acid sequences in real time during PCR amplification. The system allows parallel multiple fluorophore detection for many applications including allele discrimination and quantitative gene expression analysis. This instrument, combined with Stratagene's Sentinel Molecular Beacon kits, provides an effective system for molecular biology research. We report here the design and utility of an instrument that combines the capabilities of a microplate fluorescence reader with a PCR thermocycler into a low cost real time detection system. The instrument integrates a multiple fluorophore parallel fiber optic excitation and emission detection system, a precision X-Y translation stage, and a high performance thermoelectric temperature cycler with a computer controlled data collection and analysis system. The system uses standard PCR tubes, tube strips, and 96 well plates as the sample format. The result is a low cost, reliable, and easy to use system with premium performance for nucleic acid quantification in real time. 10

  11. Optical eye tracking system for real-time noninvasive tumor localization in external beam radiotherapy

    SciTech Connect

    Via, Riccardo Fassi, Aurora; Fattori, Giovanni; Fontana, Giulia; Pella, Andrea; Tagaste, Barbara; Ciocca, Mario; Riboldi, Marco; Baroni, Guido; Orecchia, Roberto

    2015-05-15

    Purpose: External beam radiotherapy currently represents an important therapeutic strategy for the treatment of intraocular tumors. Accurate target localization and efficient compensation of involuntary eye movements are crucial to avoid deviations in dose distribution with respect to the treatment plan. This paper describes an eye tracking system (ETS) based on noninvasive infrared video imaging. The system was designed for capturing the tridimensional (3D) ocular motion and provides an on-line estimation of intraocular lesions position based on a priori knowledge coming from volumetric imaging. Methods: Eye tracking is performed by localizing cornea and pupil centers on stereo images captured by two calibrated video cameras, exploiting eye reflections produced by infrared illumination. Additionally, torsional eye movements are detected by template matching in the iris region of eye images. This information allows estimating the 3D position and orientation of the eye by means of an eye local reference system. By combining ETS measurements with volumetric imaging for treatment planning [computed tomography (CT) and magnetic resonance (MR)], one is able to map the position of the lesion to be treated in local eye coordinates, thus enabling real-time tumor referencing during treatment setup and irradiation. Experimental tests on an eye phantom and seven healthy subjects were performed to assess ETS tracking accuracy. Results: Measurements on phantom showed an overall median accuracy within 0.16 mm and 0.40° for translations and rotations, respectively. Torsional movements were affected by 0.28° median uncertainty. On healthy subjects, the gaze direction error ranged between 0.19° and 0.82° at a median working distance of 29 cm. The median processing time of the eye tracking algorithm was 18.60 ms, thus allowing eye monitoring up to 50 Hz. Conclusions: A noninvasive ETS prototype was designed to perform real-time target localization and eye movement monitoring

  12. Results from GROCSE I: A real-time search for gamma ray burst optical counterparts

    SciTech Connect

    Lee, B.; Akerlof, C.; Ables, E.

    1995-10-27

    The GROCSE I experiment (Gamma-Ray Optical Counterpart Search Experiment) is a rapid slewing wide field of view optical telescope at Lawrence Livermore National Laboratory which responds to triggers from the BATSE GRB data telemetry stream that have been processed and distributed by the BACODINE network. GROCSE 1 has been in continuous automated operation since January 1994. As of October 1995, sky images for 22 GRB triggers have been recorded, in some cases while the burst was still emitting gamma rays. The preliminary analysis of eight of these events are presented here. No optical counterparts have yet been detected. Limits for optical emission are given.

  13. A Miniature Forward-imaging B-scan Optical Coherence Tomography Probe to Guide Real-time Laser Ablation

    PubMed Central

    Li, Zhuoyan; Shen, Jin H.; Kozub, John A.; Prasad, Ratna; Lu, Pengcheng; Joos, Karen M.

    2014-01-01

    Background and Objective Investigations have shown that pulsed lasers tuned to 6.1 μm in wavelength are capable of ablating ocular and neural tissue with minimal collateral damage. This study investigated whether a miniature B-scan forward-imaging optical coherence tomography (OCT) probe can be combined with the laser to provide real-time visual feedback during laser incisions. Study Design/Methods and Materials A miniature 25-gauge B-scan forward-imaging OCT probe was developed and combined with a 250 μm hollow-glass waveguide to permit delivery of 6.1 μm laser energy. A gelatin mixture and both porcine corneal and retinal tissues were simultaneously imaged and lased (6.1 μm, 10 Hz, 0.4-0.7 mJ) through air. The ablation studies were observed and recorded in real time. The crater dimensions were measured using OCT imaging software (Bioptigen, Durham, NC). Histological analysis was performed on the ocular tissues. Results The combined miniature forward-imaging OCT and mid-infrared laser-delivery probe successfully imaged real-time tissue ablation in gelatin, corneal tissue, and retinal tissue. Application of a constant number of 60 pulses at 0.5 mJ/pulse to the gelatin resulted in a mean crater depth of 123 ± 15 μm. For the corneal tissue, there was a significant correlation between the number of pulses used and depth of the lased hole (Pearson correlation coefficient = 0.82; P = 0.0002). Histological analysis of the cornea and retina tissues showed discrete holes with minimal thermal damage. Conclusions A combined miniature OCT and laser -delivery probe can monitor real-time tissue laser ablation. With additional testing and improvements, this novel instrument has the future possibility of effectively guiding surgeries by simultaneously imaging and ablating tissue. PMID:24648326

  14. Real-time automated thickness measurement of the in vivo human tympanic membrane using optical coherence tomography

    PubMed Central

    Hubler, Zita; Shemonski, Nathan D.; Shelton, Ryan L.; Monroy, Guillermo L.; Nolan, Ryan M.

    2015-01-01

    Background Otitis media (OM), an infection in the middle ear, is extremely common in the pediatric population. Current gold-standard methods for diagnosis include otoscopy for visualizing the surface features of the tympanic membrane (TM) and making qualitative assessments to determine middle ear content. OM typically presents as an acute infection, but can progress to chronic OM, and after numerous infections and antibiotic treatments over the course of many months, this disease is often treated by surgically inserting small tubes in the TM to relieve pressure, enable drainage, and provide aeration to the middle ear. Diagnosis and monitoring of OM is critical for successful management, but remains largely qualitative. Methods We have developed an optical coherence tomography (OCT) system for high-resolution, depth-resolved, cross-sectional imaging of the TM and middle ear content, and for the quantitative assessment of in vivo TM thickness including the presence or absence of a middle ear biofilm. A novel algorithm was developed and demonstrated for automatic, real-time, and accurate measurement of TM thickness to aid in the diagnosis and monitoring of OM and other middle ear conditions. The segmentation algorithm applies a Hough transform to the OCT image data to determine the boundaries of the TM to calculate thickness. Results The use of OCT and this segmentation algorithm is demonstrated first on layered phantoms and then during real-time acquisition of in vivo OCT from humans. For the layered phantoms, measured thicknesses varied by approximately 5 µm over time in the presence of large axial and rotational motion. In vivo data also demonstrated differences in thicknesses both spatially on a single TM, and across normal, acute, and chronic OM cases. Conclusions Real-time segmentation and thickness measurements of image data from both healthy subjects and those with acute and chronic OM demonstrate the use of OCT and this algorithm as a robust, quantitative

  15. Real-Time Detection of Staphylococcus Aureus Using Whispering Gallery Mode Optical Microdisks.

    PubMed

    Ghali, Hala; Chibli, Hicham; Nadeau, Jay L; Bianucci, Pablo; Peter, Yves-Alain

    2016-01-01

    Whispering Gallery Mode (WGM) microresonators have recently been studied as a means to achieve real-time label-free detection of biological targets such as virus particles, specific DNA sequences, or proteins. Due to their high quality (Q) factors, WGM resonators can be highly sensitive. A biosensor also needs to be selective, requiring proper functionalization of its surface with the appropriate ligand that will attach the biomolecule of interest. In this paper, WGM microdisks are used as biosensors for detection of Staphylococcus aureus. The microdisks are functionalized with LysK, a phage protein specific for staphylococci at the genus level. A binding event on the surface shifts the resonance peak of the microdisk resonator towards longer wavelengths. This reactive shift can be used to estimate the surface density of bacteria that bind to the surface of the resonator. The limit of detection of a microdisk with a Q-factor around 10⁴ is on the order of 5 pg/mL, corresponding to 20 cells. No binding of Escherichia coli to the resonators is seen, supporting the specificity of the functionalization scheme. PMID:27153099

  16. Real time corner detection for miniaturized electro-optical sensors onboard small unmanned aerial systems.

    PubMed

    Forlenza, Lidia; Carton, Patrick; Accardo, Domenico; Fasano, Giancarmine; Moccia, Antonio

    2012-01-01

    This paper describes the target detection algorithm for the image processor of a vision-based system that is installed onboard an unmanned helicopter. It has been developed in the framework of a project of the French national aerospace research center Office National d'Etudes et de Recherches Aérospatiales (ONERA) which aims at developing an air-to-ground target tracking mission in an unknown urban environment. In particular, the image processor must detect targets and estimate ground motion in proximity of the detected target position. Concerning the target detection function, the analysis has dealt with realizing a corner detection algorithm and selecting the best choices in terms of edge detection methods, filtering size and type and the more suitable criterion of detection of the points of interest in order to obtain a very fast algorithm which fulfills the computation load requirements. The compared criteria are the Harris-Stephen and the Shi-Tomasi, ones, which are the most widely used in literature among those based on intensity. Experimental results which illustrate the performance of the developed algorithm and demonstrate that the detection time is fully compliant with the requirements of the real-time system are discussed. PMID:22368499

  17. Real-Time Detection of Staphylococcus Aureus Using Whispering Gallery Mode Optical Microdisks

    PubMed Central

    Ghali, Hala; Chibli, Hicham; Nadeau, Jay L.; Bianucci, Pablo; Peter, Yves-Alain

    2016-01-01

    Whispering Gallery Mode (WGM) microresonators have recently been studied as a means to achieve real-time label-free detection of biological targets such as virus particles, specific DNA sequences, or proteins. Due to their high quality (Q) factors, WGM resonators can be highly sensitive. A biosensor also needs to be selective, requiring proper functionalization of its surface with the appropriate ligand that will attach the biomolecule of interest. In this paper, WGM microdisks are used as biosensors for detection of Staphylococcus aureus. The microdisks are functionalized with LysK, a phage protein specific for staphylococci at the genus level. A binding event on the surface shifts the resonance peak of the microdisk resonator towards longer wavelengths. This reactive shift can be used to estimate the surface density of bacteria that bind to the surface of the resonator. The limit of detection of a microdisk with a Q-factor around 104 is on the order of 5 pg/mL, corresponding to 20 cells. No binding of Escherichia coli to the resonators is seen, supporting the specificity of the functionalization scheme. PMID:27153099

  18. Real Time Corner Detection for Miniaturized Electro-Optical Sensors Onboard Small Unmanned Aerial Systems

    PubMed Central

    Forlenza, Lidia; Carton, Patrick; Accardo, Domenico; Fasano, Giancarmine; Moccia, Antonio

    2012-01-01

    This paper describes the target detection algorithm for the image processor of a vision-based system that is installed onboard an unmanned helicopter. It has been developed in the framework of a project of the French national aerospace research center Office National d’Etudes et de Recherches Aérospatiales (ONERA) which aims at developing an air-to-ground target tracking mission in an unknown urban environment. In particular, the image processor must detect targets and estimate ground motion in proximity of the detected target position. Concerning the target detection function, the analysis has dealt with realizing a corner detection algorithm and selecting the best choices in terms of edge detection methods, filtering size and type and the more suitable criterion of detection of the points of interest in order to obtain a very fast algorithm which fulfills the computation load requirements. The compared criteria are the Harris-Stephen and the Shi-Tomasi, ones, which are the most widely used in literature among those based on intensity. Experimental results which illustrate the performance of the developed algorithm and demonstrate that the detection time is fully compliant with the requirements of the real-time system are discussed. PMID:22368499

  19. The use of real-time optical feedback to improve outcomes

    NASA Astrophysics Data System (ADS)

    Magaña, Isidro B.; Adhikari, Pratik; Yendluri, Raghuvara B.; Goodrich, Glenn P.; Schwartz, Jon A.; O'Neal, D. P.

    2014-03-01

    More than a decade into the development of gold nanoparticles for cancer therapies, with multiple clinical trials underway, ongoing pre-clinical research continues towards better understanding in vivo interactions with the goal of treatment optimization through improved best practices. In an effort to collect information for healthcare providers, enabling informed decisions in a relevant time frame, instrumentation for real-time plasma concentration (multi-wavelength pulse photometry) and protocols for rapid elemental analysis (energy dispersive X-Ray fluorescence) of biopsied tumor tissue have been developed in a murine model. An initial analysis, designed to demonstrate the robust nature and utility of the techniques, revealed that area under the bioavailability curve (AUC) alone does not currently inform tumor accumulation with a high degree of accuracy (R2=0.32), This finding suggests that the control of additional experimental and physiological variables may yield more predictable tumor accumulation. Subject core temperature are blood pressure were monitored, but did not demonstrate clear trends. An effort to modulate AUC has produced an adjuvant therapy which is employed to enhance circulation parameters, including the AUC, of nanorods and gold nanoshells. Preliminary studies demonstrated a greater than 300% increase in average AUC through the use of a reticuloendothelial blockade agent versus control groups. Given a better understanding of the relative importance of the physiological factors which impact rates of tumor accumulation, a proposed set of experimental best practices is presented.

  20. Optical fiber micro-analyzer for real-time monitoring of trimethylamine

    NASA Astrophysics Data System (ADS)

    Silva, Lurdes I. B.; Freitas, Ana C.; Rocha-Santos, Teresa A. P.; Pereira, M. E.; Duarte, Armando C.

    2010-09-01

    An analytical device based on optical fiber detection has been developed for monitoring of trimethylamine (TMA) in fish handling environments and for indirect assessment of fish quality. The fiber optic analyzer was firstly calibrated and then its analytical performance evaluated by correlating TMA levels in fish tissue and in air samples from an experimental chamber containing sardines.

  1. MTF measurements on real time for performance analysis of electro-optical systems

    NASA Astrophysics Data System (ADS)

    Stuchi, Jose Augusto; Signoreto Barbarini, Elisa; Vieira, Flavio Pascoal; dos Santos, Daniel, Jr.; Stefani, Mário Antonio; Yasuoka, Fatima Maria Mitsue; Castro Neto, Jarbas C.; Linhari Rodrigues, Evandro Luis

    2012-06-01

    The need of methods and tools that assist in determining the performance of optical systems is actually increasing. One of the most used methods to perform analysis of optical systems is to measure the Modulation Transfer Function (MTF). The MTF represents a direct and quantitative verification of the image quality. This paper presents the implementation of the software, in order to calculate the MTF of electro-optical systems. The software was used for calculating the MTF of Digital Fundus Camera, Thermal Imager and Ophthalmologic Surgery Microscope. The MTF information aids the analysis of alignment and measurement of optical quality, and also defines the limit resolution of optical systems. The results obtained with the Fundus Camera and Thermal Imager was compared with the theoretical values. For the Microscope, the results were compared with MTF measured of Microscope Zeiss model, which is the quality standard of ophthalmological microscope.

  2. ERIS adaptive optics system design

    NASA Astrophysics Data System (ADS)

    Marchetti, Enrico; Le Louarn, Miska; Soenke, Christian; Fedrigo, Enrico; Madec, Pierre-Yves; Hubin, Norbert

    2012-07-01

    The Enhanced Resolution Imager and Spectrograph (ERIS) is the next-generation instrument planned for the Very Large Telescope (VLT) and the Adaptive Optics facility (AOF). It is an AO assisted instrument that will make use of the Deformable Secondary Mirror and the new Laser Guide Star Facility (4LGSF), and it is planned for the Cassegrain focus of the telescope UT4. The project is currently in its Phase A awaiting for approval to continue to the next phases. The Adaptive Optics system of ERIS will include two wavefront sensors (WFS) to maximize the coverage of the proposed sciences cases. The first is a high order 40x40 Pyramid WFS (PWFS) for on axis Natural Guide Star (NGS) observations. The second is a high order 40x40 Shack-Hartmann WFS for single Laser Guide Stars (LGS) observations. The PWFS, with appropriate sub-aperture binning, will serve also as low order NGS WFS in support to the LGS mode with a field of view patrolling capability of 2 arcmin diameter. Both WFSs will be equipped with the very low read-out noise CCD220 based camera developed for the AOF. The real-time reconstruction and control is provided by a SPARTA real-time platform adapted to support both WFS modes. In this paper we will present the ERIS AO system in all its main aspects: opto-mechanical design, real-time computer design, control and calibrations strategy. Particular emphasis will be given to the system performance obtained via dedicated numerical simulations.

  3. Experimental demonstration of the real-time online fault monitoring technique for chaos-based passive optical networks

    NASA Astrophysics Data System (ADS)

    Dou, Xinyu; Yin, Hongxi; Yue, Hehe; Jin, Yu; Shen, Jing; Li, Lin

    2015-09-01

    In this paper, a real-time online fault monitoring technique for chaos-based passive optical networks (PONs) is proposed and experimentally demonstrated. The fault monitoring is performed by the chaotic communication signal. The proof-of-concept experiments are demonstrated for two PON structures, i.e., wavelength-division-multiplexing (WDM) PON and Ethernet PON (EPON), respectively. For WDM PON, two monitoring approaches are investigated, one deploying a chaotic optical time domain reflectometry (OTDR) for each transmitter, and the other using only one tunable chaotic OTDR. The experimental results show that the faults at beyond 20 km from the OLT can be detected and located. The spatial resolution of the tunable chaotic OTDR is an order of magnitude of centimeter. Meanwhile, the monitoring process can operate in parallel with the chaotic optical secure communications. The proposed technique has benefits of real-time, online, precise fault location, and simple realization, which will significantly reduce the cost of operation, administration and maintenance (OAM) of PON.

  4. Novel real-time monitoring technique of the all-optical poling process

    NASA Astrophysics Data System (ADS)

    Apostoluk, Aleksandra; Chapron, David; Sahraoui, Bouchta; Gadret, Gregory; Fiorini-Debuisschert, Celine; Raimond, Paul; Nunzi, Jean-Michel

    2002-03-01

    All-optical poling technique permits purely optical orientation of molecules. The experiment consists of two steps: the writing (so-called seeding) period and the readout one. In the seeding phase two beams, the fundamental one ((omega) ) and its second harmonic (SH, 2(omega) ) illuminate the sample and print in the medium the second order (chi) (2) susceptibility grating with a periodicity satisfying the condition of phase matching for SH generation. In the readout period only the fundamental beam irradiates the sample, and the second harmonic generation is observed at the sample output. Efficient all-optical poling requires optimisation of the seeding beam intensities and their relative phase difference. We propose a novel technique for non-perturbative monitoring of the all-optical poling process and the easy method of orienting molecules without any necessity of taking into account the phase difference between seeding beams.

  5. Real-Time Temperature Measurement in a Vacuum Degasser Using Optical Pyrometry

    SciTech Connect

    Michel Bonin - Process Metrix; Peter Hues - Process Metrix; William Federoff - US Steel Nichloas Rymarchyk - Berry Metals; Todd Smith - Berry Metals

    2007-02-14

    The objective of the research was the development of a fiber-coupled, optical pyrometer for continuous temperature measurement in a vacuum degasser that reduces process time, enhances process control, and eliminates manual or robot-operated thermocouples. Through the live testing performed at US Steel's Edgar Thompson Works, the challenges associated with making optical temperature measurements in a vacuum chamber were identified. As a result of these challenges it was determined that continuous temperature monitoring in RH-type degassers was not a viable alternative to standard immersion thermocouples. The project was not successful.

  6. Neural adaptation and perceptual learning using a portable real-time cochlear implant simulator in natural environments.

    PubMed

    Smalt, Christopher J; Talavage, Thomas M; Pisoni, David B; Svirsky, Mario A

    2011-01-01

    A portable real-time speech processor that implements an acoustic simulation model of a cochlear implant (CI) has been developed on the Apple iPhone / iPod Touch to permit testing and experimentation under extended exposure in real-world environments. This simulator allows for both a variable number of noise band channels and electrode insertion depth. Utilizing this portable CI simulator, we tested perceptual learning in normal hearing listeners by measuring word and sentence comprehension behaviorally before and after 2 weeks of exposure. To evaluate changes in neural activation related to adaptation to transformed speech, fMRI was also conducted. Differences in brain activation after training occurred in the inferior frontal gyrus and areas related to language processing. A 15-20% improvement in word and sentence comprehension of cochlear implant simulated speech was also observed. These results demonstrate the effectiveness of a portable CI simulator as a research tool and provide new information about the physiological changes that accompany perceptual learning of degraded auditory input. PMID:22254517

  7. Real-time, adaptive machine learning for non-stationary, near chaotic gasoline engine combustion time series.

    PubMed

    Vaughan, Adam; Bohac, Stanislav V

    2015-10-01

    Fuel efficient Homogeneous Charge Compression Ignition (HCCI) engine combustion timing predictions must contend with non-linear chemistry, non-linear physics, period doubling bifurcation(s), turbulent mixing, model parameters that can drift day-to-day, and air-fuel mixture state information that cannot typically be resolved on a cycle-to-cycle basis, especially during transients. In previous work, an abstract cycle-to-cycle mapping function coupled with ϵ-Support Vector Regression was shown to predict experimentally observed cycle-to-cycle combustion timing over a wide range of engine conditions, despite some of the aforementioned difficulties. The main limitation of the previous approach was that a partially acasual randomly sampled training dataset was used to train proof of concept offline predictions. The objective of this paper is to address this limitation by proposing a new online adaptive Extreme Learning Machine (ELM) extension named Weighted Ring-ELM. This extension enables fully causal combustion timing predictions at randomly chosen engine set points, and is shown to achieve results that are as good as or better than the previous offline method. The broader objective of this approach is to enable a new class of real-time model predictive control strategies for high variability HCCI and, ultimately, to bring HCCI's low engine-out NOx and reduced CO2 emissions to production engines. PMID:26164437

  8. Real-time sensor mapping display for airborne imaging sensor test with the adaptive infrared imaging spectroradiometer (AIRIS)

    NASA Astrophysics Data System (ADS)

    Burton, Megan M.; Cruger, William E.; Gittins, Christopher; Kindle, Harry; Ricks, Timothy P.

    2005-11-01

    Captive flight testing (CFT) of sensors and seekers requires accurate data collection and display for sensor performance evaluation. The U.S. Army Redstone Technical Test Center (RTTC), in support of the U.S. Army Edgewood Chemical Biological Center (ECBC), has developed a data collection suite to facilitate airborne test of hyperspectral chemical/biological sensors. The data collection suite combines global positioning system (GPS) tracking, inertial measurement unit (IMU) data, accurate timing streams, and other test scenario information. This data collection suite also contains an advanced real-time display of aircraft and sensor field-of-view information. The latest evolution of this system has been used in support of the Adaptive InfraRed Imaging Spectroradiometer (AIRIS), currently under development by Physical Sciences Incorporated for ECBC. For this test, images from the AIRIS sensor were overlaid on a digitized background of the test area, with latencies of 1 second or less. Detects of surrogate chemicals were displayed and geo-referenced. Video overlay was accurate and reliable. This software suite offers great versatility in the display of imaging sensor data; support of future tests with the AIRIS sensor are planned as the system evolves.

  9. Neuromorphic learning of continuous-valued mappings from noise-corrupted data. Application to real-time adaptive control

    NASA Technical Reports Server (NTRS)

    Troudet, Terry; Merrill, Walter C.

    1990-01-01

    The ability of feed-forward neural network architectures to learn continuous valued mappings in the presence of noise was demonstrated in relation to parameter identification and real-time adaptive control applications. An error function was introduced to help optimize parameter values such as number of training iterations, observation time, sampling rate, and scaling of the control signal. The learning performance depended essentially on the degree of embodiment of the control law in the training data set and on the degree of uniformity of the probability distribution function of the data that are presented to the net during sequence. When a control law was corrupted by noise, the fluctuations of the training data biased the probability distribution function of the training data sequence. Only if the noise contamination is minimized and the degree of embodiment of the control law is maximized, can a neural net develop a good representation of the mapping and be used as a neurocontroller. A multilayer net was trained with back-error-propagation to control a cart-pole system for linear and nonlinear control laws in the presence of data processing noise and measurement noise. The neurocontroller exhibited noise-filtering properties and was found to operate more smoothly than the teacher in the presence of measurement noise.

  10. Neural Adaptation and Perceptual Learning using a Portable Real-Time Cochlear Implant Simulator in Natural Environments

    PubMed Central

    Smalt, Christopher J.; Talavage, Thomas M.; Pisoni, David B.; Svirsky, Mario A.

    2013-01-01

    A portable real-time speech processor that implements an acoustic simulation model of a cochlear implant (CI) has been developed on the Apple iPhone/iPod Touch to permit testing and experimentation under extended exposure in real-world environments. This simulator allows for both a variable number of noise band channels and electrode insertion depth. Utilizing this portable CI simulator, we tested perceptual learning in normal hearing listeners by measuring word and sentence comprehension behaviorally before and after 2 weeks of exposure. To evaluate changes in neural activation related to adaptation to transformed speech, fMRI was also conducted. Differences in brain activation after training occurred in the inferior frontal gyrus and areas related to language processing. A 15–20% improvement in word and sentence comprehension of cochlear implant simulated speech was also observed. These results demonstrate the effectiveness of a portable CI simulator as a research tool and provide new information about the physiological changes that accompany perceptual learning of degraded auditory input. PMID:22254517

  11. Real-time correction by optical tracking with integrated geometric distortion correction for reducing motion artifacts in functional MRI.

    PubMed

    Rotenberg, David; Chiew, Mark; Ranieri, Shawn; Tam, Fred; Chopra, Rajiv; Graham, Simon J

    2013-03-01

    Head motion artifacts are a major problem in functional MRI that limit its use in neuroscience research and clinical settings. Real-time scan-plane correction by optical tracking has been shown to correct slice misalignment and nonlinear spin-history artifacts; however, residual artifacts due to dynamic magnetic field nonuniformity may remain in the data. A recently developed correction technique, Phase Labeling for Additional Coordinate Encoding, can correct for absolute geometric distortion using only the complex image data from two echo planar images with slightly shifted k-space trajectories. An approach is presented that integrates Phase Labeling for Additional Coordinate Encoding into a real-time scan-plane update system by optical tracking, applied to a tissue-equivalent phantom undergoing complex motion and an functional MRI finger tapping experiment with overt head motion to induce dynamic field nonuniformity. Experiments suggest that such integrated volume-by-volume corrections are very effective at artifact suppression, with potential to expand functional MRI applications. PMID:22585554

  12. Rugged, Portable, Real-Time Optical Gaseous Analyzer for Hydrogen Fluoride

    NASA Technical Reports Server (NTRS)

    Pilgrim, Jeffrey; Gonzales, Paula

    2012-01-01

    Hydrogen fluoride (HF) is a primary evolved combustion product of fluorinated and perfluorinated hydrocarbons. HF is produced during combustion by the presence of impurities and hydrogen- containing polymers including polyimides. This effect is especially dangerous in closed occupied volumes like spacecraft and submarines. In these systems, combinations of perfluorinated hydrocarbons and polyimides are used for insulating wiring. HF is both highly toxic and short-lived in closed environments due to its reactivity. The high reactivity also makes HF sampling problematic. An infrared optical sensor can detect promptly evolving HF with minimal sampling requirements, while providing both high sensitivity and high specificity. A rugged optical path length enhancement architecture enables both high HF sensitivity and rapid environmental sampling with minimal gaseous contact with the low-reactivity sensor surfaces. The inert optical sample cell, combined with infrared semiconductor lasers, is joined with an analog and digital electronic control architecture that allows for ruggedness and compactness. The combination provides both portability and battery operation on a simple camcorder battery for up to eight hours. Optical detection of gaseous HF is confounded by the need for rapid sampling with minimal contact between the sensor and the environmental sample. A sensor is required that must simultaneously provide the required sub-parts-permillion detection limits, but with the high specificity and selectivity expected of optical absorption techniques. It should also be rugged and compact for compatibility with operation onboard spacecraft and submarines. A new optical cell has been developed for which environmental sampling is accomplished by simply traversing the few mm-thick cell walls into an open volume where the measurement is made. A small, low-power fan or vacuum pump may be used to push or pull the gaseous sample into the sample volume for a response time of a few

  13. Real-time distributed fiber optic sensor for security systems: Performance, event classification and nuisance mitigation

    NASA Astrophysics Data System (ADS)

    Mahmoud, Seedahmed S.; Visagathilagar, Yuvaraja; Katsifolis, Jim

    2012-09-01

    The success of any perimeter intrusion detection system depends on three important performance parameters: the probability of detection (POD), the nuisance alarm rate (NAR), and the false alarm rate (FAR). The most fundamental parameter, POD, is normally related to a number of factors such as the event of interest, the sensitivity of the sensor, the installation quality of the system, and the reliability of the sensing equipment. The suppression of nuisance alarms without degrading sensitivity in fiber optic intrusion detection systems is key to maintaining acceptable performance. Signal processing algorithms that maintain the POD and eliminate nuisance alarms are crucial for achieving this. In this paper, a robust event classification system using supervised neural networks together with a level crossings (LCs) based feature extraction algorithm is presented for the detection and recognition of intrusion and non-intrusion events in a fence-based fiber-optic intrusion detection system. A level crossings algorithm is also used with a dynamic threshold to suppress torrential rain-induced nuisance alarms in a fence system. Results show that rain-induced nuisance alarms can be suppressed for rainfall rates in excess of 100 mm/hr with the simultaneous detection of intrusion events. The use of a level crossing based detection and novel classification algorithm is also presented for a buried pipeline fiber optic intrusion detection system for the suppression of nuisance events and discrimination of intrusion events. The sensor employed for both types of systems is a distributed bidirectional fiber-optic Mach-Zehnder (MZ) interferometer.

  14. Real-time self-induced nonlinear optical Zernike-type filter in a bacteriorhodopsin film

    NASA Astrophysics Data System (ADS)

    Iturbe Castillo, David; Sanchez-de-la-Llave, David; Garcia, Ruben R.; Olivos-Perez, L. I.; Gonzalez, Luis A.; Rodriguez-Ortiz, M.

    2001-11-01

    We propose the use of a nonlinear bacteriorhodopsin film to self-induce a Zernike-type filter in robust optical phase-contrast systems. The device requires relatively low light intensity levels (as low as 200 nW/cm2) at wavelengths around 633 nm and can contrast dynamical phase distributions.

  15. Real-time optical fiber digital speckle pattern interferometry for industrial applications

    NASA Astrophysics Data System (ADS)

    Chan, Robert K.; Cheung, Y. M.; Lo, C. H.; Tam, T. K.

    1997-03-01

    There is current interest, especially in the industrial sector, to use the digital speckle pattern interferometry (DSPI) technique to measure surface stress. Indeed, many publications in the subject are evident of the growing interests in the field. However, to bring the technology to industrial use requires the integration of several emerging technologies, viz. optics, feedback control, electronics, imaging processing and digital signal processing. Due to the highly interdisciplinary nature of the technique, successful implementation and development require expertise in all of the fields. At Baptist University, under the funding of a major industrial grant, we are developing the technology for the industrial sector. Our system fully exploits optical fibers and diode lasers in the design to enable practical and rugged systems suited for industrial applications. Besides the development in optics, we have broken away from the reliance of a microcomputer PC platform for both image capture and processing, and have developed a digital signal processing array system that can handle simultaneous and independent image capture/processing with feedback control. The system, named CASPA for 'cascadable architecture signal processing array,' is a third generation development system that utilizes up to 7 digital signal processors has proved to be a very powerful system. With our CASPA we are now in a better position to developing novel optical measurement systems for industrial application that may require different measurement systems to operate concurrently and requiring information exchange between the systems. Applications in mind such as simultaneous in-plane and out-of-plane DSPI image capture/process, vibrational analysis with interactive DSPI and phase shifting control of optical systems are a few good examples of the potentials.

  16. Adaptive Radiation Therapy for Postprostatectomy Patients Using Real-Time Electromagnetic Target Motion Tracking During External Beam Radiation Therapy

    SciTech Connect

    Zhu, Mingyao; Bharat, Shyam; Michalski, Jeff M.; Gay, Hiram A.; Hou, Wei-Hsien; Parikh, Parag J.

    2013-03-15

    Purpose: Using real-time electromagnetic (EM) transponder tracking data recorded by the Calypso 4D Localization System, we report inter- and intrafractional target motion of the prostate bed, describe a strategy to evaluate treatment adequacy in postprostatectomy patients receiving intensity modulated radiation therapy (IMRT), and propose an adaptive workflow. Methods and Materials: Tracking data recorded by Calypso EM transponders was analyzed for postprostatectomy patients that underwent step-and-shoot IMRT. Rigid target motion parameters during beam delivery were calculated from recorded transponder positions in 16 patients with rigid transponder geometry. The delivered doses to the clinical target volume (CTV) were estimated from the planned dose matrix and the target motion for the first 3, 5, 10, and all fractions. Treatment adequacy was determined by comparing the delivered minimum dose (D{sub min}) with the planned D{sub min} to the CTV. Treatments were considered adequate if the delivered CTV D{sub min} is at least 95% of the planned CTV D{sub min}. Results: Translational target motion was minimal for all 16 patients (mean: 0.02 cm; range: −0.12 cm to 0.07 cm). Rotational motion was patient-specific, and maximum pitch, yaw, and roll were 12.2, 4.1, and 10.5°, respectively. We observed inadequate treatments in 5 patients. In these treatments, we observed greater target rotations along with large distances between the CTV centroid and transponder centroid. The treatment adequacy from the initial 10 fractions successfully predicted the overall adequacy in 4 of 5 inadequate treatments and 10 of 11 adequate treatments. Conclusion: Target rotational motion could cause underdosage to partial volume of the postprostatectomy targets. Our adaptive treatment strategy is applicable to post-prostatectomy patients receiving IMRT to evaluate and improve radiation therapy delivery.

  17. Real-time verification of multileaf collimator-driven radiotherapy using a novel optical attenuation-based fluence monitor

    SciTech Connect

    Goulet, Mathieu; Gingras, Luc; Beaulieu, Luc

    2011-03-15

    observed a very low intrinsic dispersion, dominated by Poisson statistics, for both x{sub c} (standard deviations of less than 1 mm) and {Phi}{sub int} (standard deviations of less than 0.20%). When confronted with random leaf positioning errors from IMRT segments, {Phi}{sub int} was highly sensitive to single leaf positioning errors as small as 1 mm at isocenter, while x{sub c} was sensitive to leaf pair translation errors of at least 2 mm at isocenter. Owing to the uncertainties in the doses calculated in regions of high perpendicular dose gradients, the measured values of x{sub c} and {Phi}{sub int} deviated from the predicted values of x{sub c} and {Phi}{sub int} by a mean of 1.3 mm and 2.6%, respectively. Conclusion: Our study showed that an optical attenuation-based detector can be used to effectively monitor integral fluence during radiotherapy delivery. The performance of such a system would enable real-time quality control of the incident fluence in current MLC-driven treatments such as IMRT and future adaptive radiotherapy procedures where new treatment plans will have to be delivered without passing thru the current standard quality control chain.

  18. An Engineered Approach to Stem Cell Culture: Automating the Decision Process for Real-Time Adaptive Subculture of Stem Cells

    PubMed Central

    Ker, Dai Fei Elmer; Weiss, Lee E.; Junkers, Silvina N.; Chen, Mei; Yin, Zhaozheng; Sandbothe, Michael F.; Huh, Seung-il; Eom, Sungeun; Bise, Ryoma; Osuna-Highley, Elvira; Kanade, Takeo; Campbell, Phil G.

    2011-01-01

    Current cell culture practices are dependent upon human operators and remain laborious and highly subjective, resulting in large variations and inconsistent outcomes, especially when using visual assessments of cell confluency to determine the appropriate time to subculture cells. Although efforts to automate cell culture with robotic systems are underway, the majority of such systems still require human intervention to determine when to subculture. Thus, it is necessary to accurately and objectively determine the appropriate time for cell passaging. Optimal stem cell culturing that maintains cell pluripotency while maximizing cell yields will be especially important for efficient, cost-effective stem cell-based therapies. Toward this goal we developed a real-time computer vision-based system that monitors the degree of cell confluency with a precision of 0.791±0.031 and recall of 0.559±0.043. The system consists of an automated phase-contrast time-lapse microscope and a server. Multiple dishes are sequentially imaged and the data is uploaded to the server that performs computer vision processing, predicts when cells will exceed a pre-defined threshold for optimal cell confluency, and provides a Web-based interface for remote cell culture monitoring. Human operators are also notified via text messaging and e-mail 4 hours prior to reaching this threshold and immediately upon reaching this threshold. This system was successfully used to direct the expansion of a paradigm stem cell population, C2C12 cells. Computer-directed and human-directed control subcultures required 3 serial cultures to achieve the theoretical target cell yield of 50 million C2C12 cells and showed no difference for myogenic and osteogenic differentiation. This automated vision-based system has potential as a tool toward adaptive real-time control of subculturing, cell culture optimization and quality assurance/quality control, and it could be integrated with current and developing robotic cell

  19. Fabrication of continuous relief micro-optic elements using real-time maskless lithography technique based on DMD

    NASA Astrophysics Data System (ADS)

    Zhong, Kejun; Gao, Yiqing; Li, Feng; Luo, Ningning; Zhang, Weiwei

    2014-03-01

    A novel method is proposed to fabricate continuous relief micro-optic elements using real-time maskless lithography technique based on digital mirror device (DMD). To evaluate the method, aspheric and spheric micro-lens array was fabricated by following the proposed principle. Firstly distribution of the required exposure dose of lens array was obtained and sliced into a number of contours of equal proportions. Then the contour planes instead of virtual masks were converted into binary image. On the lithography system, the dose accumulated over multiple exposures and the required exposure dose profiles were reconstructed. Finally in the photoresist layer, virtual profiles of lens array were formed, consistent with the original designed elements. The method is feasible and reliable for the fabrication of arbitrary continuous relief micro-optic elements.

  20. An improved optical flow tracking technique for real-time MR-guided beam therapies in moving organs

    NASA Astrophysics Data System (ADS)

    Zachiu, C.; Papadakis, N.; Ries, M.; Moonen, C.; de Senneville, B. Denis

    2015-12-01

    Magnetic resonance (MR) guided high intensity focused ultrasound and external beam radiotherapy interventions, which we shall refer to as beam therapies/interventions, are promising techniques for the non-invasive ablation of tumours in abdominal organs. However, therapeutic energy delivery in these areas becomes challenging due to the continuous displacement of the organs with respiration. Previous studies have addressed this problem by coupling high-framerate MR-imaging with a tracking technique based on the algorithm proposed by Horn and Schunck (H and S), which was chosen due to its fast convergence rate and highly parallelisable numerical scheme. Such characteristics were shown to be indispensable for the real-time guidance of beam therapies. In its original form, however, the algorithm is sensitive to local grey-level intensity variations not attributed to motion such as those that occur, for example, in the proximity of pulsating arteries. In this study, an improved motion estimation strategy which reduces the impact of such effects is proposed. Displacements are estimated through the minimisation of a variation of the H and S functional for which the quadratic data fidelity term was replaced with a term based on the linear L1norm, resulting in what we have called an L2-L1 functional. The proposed method was tested in the livers and kidneys of two healthy volunteers under free-breathing conditions, on a data set comprising 3000 images equally divided between the volunteers. The results show that, compared to the existing approaches, our method demonstrates a greater robustness to local grey-level intensity variations introduced by arterial pulsations. Additionally, the computational time required by our implementation make it compatible with the work-flow of real-time MR-guided beam interventions. To the best of our knowledge this study was the first to analyse the behaviour of an L1-based optical flow functional in an applicative context: real-time MR

  1. Real-time optical multiple object recognition and tracking system and method

    NASA Technical Reports Server (NTRS)

    Chao, Tien-Hsin (Inventor); Liu, Hua-Kuang (Inventor)

    1990-01-01

    System for optically recognizing and tracking a plurality of objects within a field of vision. Laser (46) produces a coherent beam (48). Beam splitter (24) splits the beam into object (26) and reference (28) beams. Beam expanders (50) and collimators (52) transform the beams (26, 28) into coherent collimated light beams (26', 28'). A two-dimensional SLM (54), disposed in the object beam (26'), modulates the object beam with optical information as a function of signals from a first camera (16) which develops X and Y signals reflecting the contents of its field of vision. A hololens (38), positioned in the object beam (26') subsequent to the modulator (54), focuses the object beam at a plurality of focal points (42). A planar transparency-forming film (32), disposed with the focal points on an exposable surface, forms a multiple position interference filter (62) upon exposure of the surface and development processing of the film (32). A reflector (53) directing the reference beam (28') onto the film (32), exposes the surface, with images focused by the hololens (38), to form interference patterns on the surface. There is apparatus (16', 64) for sensing and indicating light passage through respective ones of the positions of the filter (62), whereby recognition of objects corresponding to respective ones of the positions of the filter (62) is affected. For tracking, apparatus (64) focuses light passing through the filter (62) onto a matrix of CCD's in a second camera (16') to form a two-dimensional display of the recognized objects.

  2. Fiber optic distributed chemical sensor for the real time detection of hydrocarbon fuel leaks

    NASA Astrophysics Data System (ADS)

    Mendoza, Edgar; Kempen, C.; Esterkin, Yan; Sun, Sunjian

    2015-09-01

    With the increase worldwide demand for hydrocarbon fuels and the vast development of new fuel production and delivery infrastructure installations around the world, there is a growing need for reliable hydrocarbon fuel leak detection technologies to provide safety and reduce environmental risks. Hydrocarbon leaks (gas or liquid) pose an extreme danger and need to be detected very quickly to avoid potential disasters. Gas leaks have the greatest potential for causing damage due to the explosion risk from the dispersion of gas clouds. This paper describes progress towards the development of a fast response, high sensitivity, distributed fiber optic fuel leak detection (HySense™) system based on the use of an optical fiber that uses a hydrocarbon sensitive fluorescent coating to detect the presence of fuel leaks present in close proximity along the length of the sensor fiber. The HySense™ system operates in two modes, leak detection and leak localization, and will trigger an alarm within seconds of exposure contact. The fast and accurate response of the sensor provides reliable fluid leak detection for pipelines, storage tanks, airports, pumps, and valves to detect and minimize any potential catastrophic damage.

  3. Single-Molecule Real-Time Sequencing Combined with Optical Mapping Yields Completely Finished Fungal Genome

    PubMed Central

    Faino, Luigi; Seidl, Michael F.; Datema, Erwin; van den Berg, Grardy C. M.; Janssen, Antoine; Wittenberg, Alexander H. J.

    2015-01-01

    ABSTRACT Next-generation sequencing (NGS) technologies have increased the scalability, speed, and resolution of genomic sequencing and, thus, have revolutionized genomic studies. However, eukaryotic genome sequencing initiatives typically yield considerably fragmented genome assemblies. Here, we assessed various state-of-the-art sequencing and assembly strategies in order to produce a contiguous and complete eukaryotic genome assembly, focusing on the filamentous fungus Verticillium dahliae. Compared with Illumina-based assemblies of the V. dahliae genome, hybrid assemblies that also include PacBio-generated long reads establish superior contiguity. Intriguingly, provided that sufficient sequence depth is reached, assemblies solely based on PacBio reads outperform hybrid assemblies and even result in fully assembled chromosomes. Furthermore, the addition of optical map data allowed us to produce a gapless and complete V. dahliae genome assembly of the expected eight chromosomes from telomere to telomere. Consequently, we can now study genomic regions that were previously not assembled or poorly assembled, including regions that are populated by repetitive sequences, such as transposons, allowing us to fully appreciate an organism’s biological complexity. Our data show that a combination of PacBio-generated long reads and optical mapping can be used to generate complete and gapless assemblies of fungal genomes. PMID:26286689

  4. Real-time resampling in Fourier domain optical coherence tomography using a graphics processing unit.

    PubMed

    Van der Jeught, Sam; Bradu, Adrian; Podoleanu, Adrian Gh

    2010-01-01

    Fourier domain optical coherence tomography (FD-OCT) requires either a linear-in-wavenumber spectrometer or a computationally heavy software algorithm to recalibrate the acquired optical signal from wavelength to wavenumber. The first method is sensitive to the position of the prism in the spectrometer, while the second method drastically slows down the system speed when it is implemented on a serially oriented central processing unit. We implement the full resampling process on a commercial graphics processing unit (GPU), distributing the necessary calculations to many stream processors that operate in parallel. A comparison between several recalibration methods is made in terms of performance and image quality. The GPU is also used to accelerate the fast Fourier transform (FFT) and to remove the background noise, thereby achieving full GPU-based signal processing without the need for extra resampling hardware. A display rate of 25 framessec is achieved for processed images (1,024 x 1,024 pixels) using a line-scan charge-coupled device (CCD) camera operating at 25.6 kHz. PMID:20614994

  5. Real-time resampling in Fourier domain optical coherence tomography using a graphics processing unit

    NASA Astrophysics Data System (ADS)

    van der Jeught, Sam; Bradu, Adrian; Podoleanu, Adrian Gh.

    2010-05-01

    Fourier domain optical coherence tomography (FD-OCT) requires either a linear-in-wavenumber spectrometer or a computationally heavy software algorithm to recalibrate the acquired optical signal from wavelength to wavenumber. The first method is sensitive to the position of the prism in the spectrometer, while the second method drastically slows down the system speed when it is implemented on a serially oriented central processing unit. We implement the full resampling process on a commercial graphics processing unit (GPU), distributing the necessary calculations to many stream processors that operate in parallel. A comparison between several recalibration methods is made in terms of performance and image quality. The GPU is also used to accelerate the fast Fourier transform (FFT) and to remove the background noise, thereby achieving full GPU-based signal processing without the need for extra resampling hardware. A display rate of 25 frames/sec is achieved for processed images (1024×1024 pixels) using a line-scan charge-coupled device (CCD) camera operating at 25.6 kHz.

  6. Real-Time Monitoring of Morphology and Optical Properties during Sputter Deposition for Tailoring Metal-Polymer Interfaces.

    PubMed

    Schwartzkopf, Matthias; Santoro, Gonzalo; Brett, Calvin J; Rothkirch, André; Polonskyi, Oleksandr; Hinz, Alexander; Metwalli, Ezzeldin; Yao, Yuan; Strunskus, Thomas; Faupel, Franz; Müller-Buschbaum, Peter; Roth, Stephan V

    2015-06-24

    The reproducible low-cost fabrication of functional metal-polymer nanocomposites with tailored optoelectronic properties for advanced applications remains a major challenge in applied nanotechnology. To obtain full control over the nanostructural evolution at the metal-polymer interface and its impact on optoelectronic properties, we employed combined in situ time-resolved microfocus grazing incidence small angle X-ray scattering (μGISAXS) with in situ UV/vis specular reflectance spectroscopy (SRS) during sputter deposition of gold on thin polystyrene films. On the basis of the temporal evolution of the key scattering features in the real-time μGISAXS experiment, we directly observed four different growth regimes: nucleation, isolated island growth, growth of larger aggregates via partial coalescence, and continuous layer growth. Moreover, their individual thresholds were identified with subnanometer resolution and correlated to the changes in optical properties. During sputter deposition, a change in optical reflectivity of the pristine gray-blue PS film was observed ranging from dark blue color due to the presence of isolated nanoclusters at the interface to bright red color from larger Au aggregates. We used simplified geometrical assumptions to model the evolution of average real space parameters (distance, size, density, contact angle) in excellent agreement with the qualitative observation of key scattering features. A decrease of contact angles was observed during the island-to-percolation transition and confirmed by simulations. Furthermore, a surface diffusion coefficient according to the kinetic freezing model and interfacial energy of Au on PS at room temperature were calculated based on a real-time experiment. The morphological characterization is complemented by X-ray reflectivity, optical, and electron microscopy. Our study permits a better understanding of the growth kinetics of gold clusters and their self-organization into complex nanostructures

  7. Multi-particle three-dimensional coordinate estimation in real-time optical manipulation

    NASA Astrophysics Data System (ADS)

    Dam, J. S.; Perch-Nielsen, I.; Palima, D.; Gluckstad, J.

    2009-11-01

    We have previously shown how stereoscopic images can be obtained in our three-dimensional optical micromanipulation system [J. S. Dam et al, Opt. Express 16, 7244 (2008)]. Here, we present an extension and application of this principle to automatically gather the three-dimensional coordinates for all trapped particles with high tracking range and high reliability without requiring user calibration. Through deconvolving of the red, green, and blue colour planes to correct for bleeding between colour planes, we show that we can extend the system to also utilize green illumination, in addition to the blue and red. Applying the green colour as on-axis illumination yields redundant information for enhanced error correction, which is used to verify the gathered data, resulting in reliable coordinates as well as producing visually attractive images.

  8. A real-time measurement system for parameters of live biology metabolism process with fiber optics

    NASA Astrophysics Data System (ADS)

    Tao, Wei; Zhao, Hui; Liu, Zemin; Cheng, Jinke; Cai, Rong

    2010-08-01

    Energy metabolism is one of the basic life activities of cellular in which lactate, O2 and CO2 will be released into the extracellular environment. By monitoring the quantity of these parameters, the mitochondrial performance will be got. A continuous measurement system for the concentration of O2, CO2 and PH value is introduced in this paper. The system is made up of several small-sized fiber optics biosensors corresponding to the container. The setup of the system and the principle of measurement of several parameters are explained. The setup of the fiber PH sensor based on principle of light absorption is also introduced in detail and some experimental results are given. From the results we can see that the system can measure the PH value precisely suitable for cell cultivation. The linear and repeatable accuracies are 3.6% and 6.7% respectively, which can fulfill the measurement task.

  9. Noninvasive, real-time measurements of plasma parameters via optical emission spectroscopy

    SciTech Connect

    Wang Shicong; Wendt, Amy E.; Boffard, John B.; Lin, Chun C.; Radovanov, Svetlana; Persing, Harold

    2013-03-15

    Plasma process control applications require acquisition of diagnostic data at a rate faster than the characteristic timescale of perturbations to the plasma. Diagnostics based on optical emission spectroscopy of intense emission lines permit rapid noninvasive measurements with low-resolution ({approx}1 nm), fiber-coupled spectrographs, which are included on many plasma process tools for semiconductor processing. Here the authors report on rapid analysis of Ar emissions with such a system to obtain electron temperatures, electron densities, and metastable densities in argon and argon/mixed-gas (Ar/N{sub 2}, Ar/O{sub 2}, Ar/H{sub 2}) inductively coupled plasmas. Accuracy of the results (compared to measurements made by Langmuir probe and white-light absorption spectroscopy) are typically better than {+-}15% with a time resolution of 0.1 s, which is more than sufficient to capture the transient behavior of many processes, limited only by the time response of the spectrograph used.

  10. Real time optical edge enhancement using a Hughes liquid crystal light valve

    NASA Technical Reports Server (NTRS)

    Chao, Tien-Hsin

    1989-01-01

    The discovery of an edge enhancement effect in using a Hughes CdS liquid crystal light valve (LCLV) is reported. An edge-enhanced version of the input writing image can be directly obtained by operating the LCLV at a lower bias frequency and bias voltage. Experimental conditions in which this edge enhancement effect can be optimized are described. Experimental results show that the SNR of the readout image using this technique is superior to that obtained using high-pass filtering. The repeatability of this effect is confirmed by obtaining an edge enhancement result using two different Hughes LCLVs. The applicability of this effect to improve discrimination capability in optical pattern recognition is addressed. The results show that the Hughes LCLV can be used in both continuous tone and edge-enhancing modes by simply adjusting its bias conditions.

  11. Optical joint correlator for real-time image tracking and retinal surgery

    NASA Technical Reports Server (NTRS)

    Juday, Richard D. (Inventor)

    1991-01-01

    A method for tracking an object in a sequence of images is described. Such sequence of images may, for example, be a sequence of television frames. The object in the current frame is correlated with the object in the previous frame to obtain the relative location of the object in the two frames. An optical joint transform correlator apparatus is provided to carry out the process. Such joint transform correlator apparatus forms the basis for laser eye surgical apparatus where an image of the fundus of an eyeball is stabilized and forms the basis for the correlator apparatus to track the position of the eyeball caused by involuntary movement. With knowledge of the eyeball position, a surgical laser can be precisely pointed toward a position on the retina.

  12. Real-time, noninvasive optical coherence tomography of cross-sectional living cell-sheets in vitro and in vivo.

    PubMed

    Kobayashi, Mari; Haraguchi, Yuji; Shimizu, Tatsuya; Mizuuchi, Kiminori; Iseki, Hiroshi

    2015-08-01

    Cell sheet technology has a history of application in regenerating various tissues, having successfully completed several clinical trials using autologous cell sheets. Tomographic analysis of living cell sheets is an important tool in the field of cell sheet-based regenerative medicine and tissue engineering to analyze the inner structure of layered living cells. Optical coherence tomography (OCT) is commonly used in ophthalmology to noninvasively analyze cross-sections of target tissues at high resolution. This study used OCT to conduct real-time, noninvasive analysis of living cell sheet cross sections. OCT showed the internal structure of cell sheets in tomographic images synthesized with backscatter signals from inside the living cell sheet without invasion or damage. OCT observations were used to analyze the static and dynamic behaviors of living cell sheets in vitro and in vivo including (1) the harvesting process of a C2C12 mouse skeletal myoblast sheet from a temperature-responsive culture surface; (2) cell-sheet adhesion onto various surfaces including a culture surface, a synthetic rubber glove, and the dorsal subcutaneous tissue of rats; and (3) the real-time propagation of beating rat cardiac cells within cardiac cell sheets. This study showed that OCT technology is a powerful tool in the field of cell sheet-based regenerative medicine and tissue engineering. PMID:25350859

  13. Real-time frequency domain temperature and oxygen sensor with a single optical fiber.

    PubMed

    Liao, S C; Xu, Z; Izatt, J A; Alcala, J R

    1997-11-01

    The combined excited-state phosphorescence life-times of an alexandrite crystal and platinum tetraphenylporphyrin Pt(TPP) in a single-fiber sensor are used to monitor temperature and oxygen concentration in the physiological range from 15-45 degrees C and 0-50% O2 with precision of 0.24 degree C and 0.15% O2 and accuracy of 0.28 degree C and 0.2% O2. A 500-micron cubic alexandrite crystal bound to the distal end of a 750-micron-diameter optical fiber core and the Pt(TPP) coated circumferentially with a length of 1 cm from the end of the same fiber are excited with pulsed super-bright blue LED light. This apparatus uses a 125-kHz sampler for data acquisition and frequency domain methods for signal processing. The instrument amplifies both the dc and ac components of the photomultiplier output and band limits the signal to 20 kHz. The fundamental frequency of the excitation is set to 488.3 Hz and the highest harmonic used is the 35th. This bandlimited signal is sampled and averaged over a few hundred cycles in the time domain. The frequency domain representation of the data is obtained by employing fast Fourier transform algorithms. The phase delay and the modulation ratio of each sampled harmonic are then computed. At least four log-spaced harmonic phases or modulations are averaged before decoding the two lifetimes of temperature and oxygen phosphorescent sensors. A component of zero lifetime is introduced to account for the excitation backscatter leakage through optical interference filters seen by the photodetector. Linear and second-order empirical polynomials are employed to compute the temperatures and oxygen concentrations from the inverse lifetimes. In the situation of constant oxygen concentration, the lifetime of Pt(TPP) changes with temperature but can be compensated using the measured temperature lifetime. The system drift is 0.24 degree C for the temperature measurement and 0.59% for the oxygen concentration measurement over 30 h of continuous operation

  14. Telescope Adaptive Optics Code

    SciTech Connect

    Phillion, D.

    2005-07-28

    The Telescope AO Code has general adaptive optics capabilities plus specialized models for three telescopes with either adaptive optics or active optics systems. It has the capability to generate either single-layer or distributed Kolmogorov turbulence phase screens using the FFT. Missing low order spatial frequencies are added using the Karhunen-Loeve expansion. The phase structure curve is extremely dose to the theoreUcal. Secondly, it has the capability to simulate an adaptive optics control systems. The default parameters are those of the Keck II adaptive optics system. Thirdly, it has a general wave optics capability to model the science camera halo due to scintillation from atmospheric turbulence and the telescope optics. Although this capability was implemented for the Gemini telescopes, the only default parameter specific to the Gemini telescopes is the primary mirror diameter. Finally, it has a model for the LSST active optics alignment strategy. This last model is highly specific to the LSST

  15. Real Time Gabor-Domain Optical Coherence Microscopy for 3D Imaging.

    PubMed

    Rolland, Jannick P; Canavesi, Cristina; Tankam, Patrice; Cogliati, Andrea; Lanis, Mara; Santhanam, Anand P

    2016-01-01

    Fast, robust, nondestructive 3D imaging is needed for the characterization of microscopic tissue structures across various clinical applications. A custom microelectromechanical system (MEMS)-based 2D scanner was developed to achieve, together with a multi-level GPU architecture, 55 kHz fast-axis A-scan acquisition in a Gabor-domain optical coherence microscopy (GD-OCM) custom instrument. GD-OCM yields high-definition micrometer-class volumetric images. A dynamic depth of focusing capability through a bio-inspired liquid lens-based microscope design, as in whales' eyes, was developed to enable the high definition instrument throughout a large field of view of 1 mm3 volume of imaging. Developing this technology is prime to enable integration within the workflow of clinical environments. Imaging at an invariant resolution of 2 μm has been achieved throughout a volume of 1 × 1 × 0.6 mm3, acquired in less than 2 minutes. Volumetric scans of human skin in vivo and an excised human cornea are presented. PMID:27046601

  16. Real-time monitoring of hemodynamic changes in tumor vessels during photoimmunotherapy using optical coherence tomography

    PubMed Central

    Liang, Chia-Pin; Nakajima, Takahito; Watanabe, Rira; Sato, Kazuhide; Choyke, Peter L.; Chen, Yu; Kobayashi, Hisataka

    2014-01-01

    Abstract. Photoimmunotherapy (PIT) is a cell-specific cancer therapy based on an armed antibody conjugate that induces rapid and highly selective cancer cell necrosis after exposure to near-infrared (NIR) light. The PIT treatment also induces the superenhanced permeability and retention effect, which allows high concentrations of nanoparticles to accumulate in the tumor bed. In our pilot studies, optical coherence tomography (OCT) reveals dramatic hemodynamic changes during PIT. We developed and applied speckle variance analysis, Doppler flow measurement, bulk motion removal, and automatic region of interest selection to quantify vessel diameter and blood velocity within tumors in vivo. OCT imaging reveals that blood velocity in peripheral tumor vessels quickly drops below the detection limit while the vessel lumen remains open (4 vessels from 3 animals). On the other hand, control tumor vessels (receive NIR illumination but no PIT drug) do not show the sustained blood velocity drop (5 vessels from 3 animals). Ultraslow blood velocity could result in a long drug circulation time in tumor. Increase of the blood pool volume within the central tumor (shown in histology) may be the leading cause of the periphery blood velocity drop and could also increase the drug pool volume in tumor vessels. PMID:25253195

  17. Mitochondrial function and tissue vitality: bench-to-bedside real-time optical monitoring system

    NASA Astrophysics Data System (ADS)

    Mayevsky, Avraham; Walden, Raphael; Pewzner, Eliyahu; Deutsch, Assaf; Heldenberg, Eitan; Lavee, Jacob; Tager, Salis; Kachel, Erez; Raanani, Ehud; Preisman, Sergey; Glauber, Violete; Segal, Eran

    2011-06-01

    Background: The involvement of mitochondria in pathological states, such as neurodegenerative diseases, sepsis, stroke, and cancer, are well documented. Monitoring of nicotinamide adenine dinucleotide (NADH) fluorescence in vivo as an intracellular oxygen indicator was established in 1950 to 1970 by Britton Chance and collaborators. We use a multiparametric monitoring system enabling assessment of tissue vitality. In order to use this technology in clinical practice, the commercial developed device, the CritiView (CRV), is tested in animal models as well as in patients. Methods and Results: The new CRV enables the optical monitoring of four different parameters, representing the energy balance of various tissues in vivo. Mitochondrial NADH is measured by surface fluorometry/reflectometry. In addition, tissue microcirculatory blood flow, tissue reflectance and oxygenation are measured as well. The device is tested both in vitro and in vivo in a small animal model and in preliminary clinical trials in patients undergoing vascular or open heart surgery. In patients, the monitoring is started immediately after the insertion of a three-way Foley catheter (urine collection) to the patient and is stopped when the patient is discharged from the operating room. The results show that monitoring the urethral wall vitality provides information in correlation to the surgical procedure performed.

  18. Real-time monitoring of hemodynamic changes in tumor vessels during photoimmunotherapy using optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Liang, Chia-Pin; Nakajima, Takahito; Watanabe, Rira; Sato, Kazuhide; Choyke, Peter L.; Chen, Yu; Kobayashi, Hisataka

    2014-09-01

    Photoimmunotherapy (PIT) is a cell-specific cancer therapy based on an armed antibody conjugate that induces rapid and highly selective cancer cell necrosis after exposure to near-infrared (NIR) light. The PIT treatment also induces the superenhanced permeability and retention effect, which allows high concentrations of nanoparticles to accumulate in the tumor bed. In our pilot studies, optical coherence tomography (OCT) reveals dramatic hemodynamic changes during PIT. We developed and applied speckle variance analysis, Doppler flow measurement, bulk motion removal, and automatic region of interest selection to quantify vessel diameter and blood velocity within tumors in vivo. OCT imaging reveals that blood velocity in peripheral tumor vessels quickly drops below the detection limit while the vessel lumen remains open (4 vessels from 3 animals). On the other hand, control tumor vessels (receive NIR illumination but no PIT drug) do not show the sustained blood velocity drop (5 vessels from 3 animals). Ultraslow blood velocity could result in a long drug circulation time in tumor. Increase of the blood pool volume within the central tumor (shown in histology) may be the leading cause of the periphery blood velocity drop and could also increase the drug pool volume in tumor vessels.

  19. [Adaptive optics for ophthalmology].

    PubMed

    Saleh, M

    2016-04-01

    Adaptive optics is a technology enhancing the visual performance of an optical system by correcting its optical aberrations. Adaptive optics have already enabled several breakthroughs in the field of visual sciences, such as improvement of visual acuity in normal and diseased eyes beyond physiologic limits, and the correction of presbyopia. Adaptive optics technology also provides high-resolution, in vivo imaging of the retina that may eventually help to detect the onset of retinal conditions at an early stage and provide better assessment of treatment efficacy. PMID:27019970

  20. Note: Real time optical sensing of alpha-radiation emitting radioactive aerosols based on solid state nuclear track detector.

    PubMed

    Kulkarni, A; Ha, S; Joshirao, P; Manchanda, V; Bak, M S; Kim, T

    2015-06-01

    A sensitive radioactive aerosols sensor has been designed and developed. Its design guidance is based on the need for a low operational cost and reliable measurements to provide daily aerosol monitoring. The exposure of diethylene-glycol bis (allylcarbonate) to radiation causes modification of its physico-chemical properties like surface roughness and reflectance. In the present study, optical sensor based on the reflectance measurement has been developed with an aim to monitor real time presence of alpha radioactive aerosols emitted from thorium nitrate hydrate. The results shows that the fabricated sensor can detect 0.0157 kBq to 0.1572 kBq of radio activity by radioactive aerosols generated from (Th(NO3)4 ⋅ 5H2O) at 0.1 ml/min flow rate. The proposed instrument will be helpful to monitor radioactive aerosols in/around a nuclear facility, building construction sites, mines, and granite polishing factories. PMID:26133876

  1. Real-time and high-performance calibration method for high-speed swept-source optical coherence tomography

    PubMed Central

    Azimi, Ehsan; Liu, Bin; Brezinski, Mark E.

    2010-01-01

    For high-speed swept-source optical coherence tomography (SS-OCT), the real-time calibration process to convert the OCT signal to wave number space is highly essential. A novel calibration process∕algorithm using a genetic algorithm and precise interpolation is developed. This algorithm is embedded and validated in a SS-OCT system with 16-kHz A-scan rate. The performance of the new algorithm is evaluated by measuring point spread functions at two distinct locations in the entire imaging range. The data is compared to the same system but embedded with a regular calibration algorithm, which demonstrates about 20% improvement in the axial resolution. The steady improvement at different locations of the range suggests the strong robustness of the algorithm, which will ultimately optimize the operation performance of this SS-OCT system in terms of resolution and dynamic range and improves details in biological tissues. PMID:20210451

  2. Note: Real time optical sensing of alpha-radiation emitting radioactive aerosols based on solid state nuclear track detector

    SciTech Connect

    Kulkarni, A.; Bak, M. S. E-mail: moonsoo@skku.edu; Ha, S.; Joshirao, P.; Manchanda, V.; Kim, T. E-mail: moonsoo@skku.edu

    2015-06-15

    A sensitive radioactive aerosols sensor has been designed and developed. Its design guidance is based on the need for a low operational cost and reliable measurements to provide daily aerosol monitoring. The exposure of diethylene-glycol bis (allylcarbonate) to radiation causes modification of its physico-chemical properties like surface roughness and reflectance. In the present study, optical sensor based on the reflectance measurement has been developed with an aim to monitor real time presence of alpha radioactive aerosols emitted from thorium nitrate hydrate. The results shows that the fabricated sensor can detect 0.0157 kBq to 0.1572 kBq of radio activity by radioactive aerosols generated from (Th(NO{sub 3}){sub 4} ⋅ 5H{sub 2}O) at 0.1 ml/min flow rate. The proposed instrument will be helpful to monitor radioactive aerosols in/around a nuclear facility, building construction sites, mines, and granite polishing factories.

  3. Driver Code for Adaptive Optics

    NASA Technical Reports Server (NTRS)

    Rao, Shanti

    2007-01-01

    A special-purpose computer code for a deformable-mirror adaptive-optics control system transmits pixel-registered control from (1) a personal computer running software that generates the control data to (2) a circuit board with 128 digital-to-analog converters (DACs) that generate voltages to drive the deformable-mirror actuators. This program reads control-voltage codes from a text file, then sends them, via the computer s parallel port, to a circuit board with four AD5535 (or equivalent) chips. Whereas a similar prior computer program was capable of transmitting data to only one chip at a time, this program can send data to four chips simultaneously. This program is in the form of C-language code that can be compiled and linked into an adaptive-optics software system. The program as supplied includes source code for integration into the adaptive-optics software, documentation, and a component that provides a demonstration of loading DAC codes from a text file. On a standard Windows desktop computer, the software can update 128 channels in 10 ms. On Real-Time Linux with a digital I/O card, the software can update 1024 channels (8 boards in parallel) every 8 ms.

  4. Laser-induced fluorescence over optical fibers for real time in situ measurement of petroleum hydrocarbons in seawater

    NASA Astrophysics Data System (ADS)

    Lieberman, S. H.; Inman, S. M.; Theriault, G. A.

    1993-04-01

    A fiber optic-based fluorometer system is described that uses a pulsed laser to induce fluorescence and a time-gated linear photodiode array coupled to a spectrograph for rapid measurement of fluorescence emission spectra and fluorescence decay times. Data is presented from studies conducted in San Diego Bay where the system has been used for real-time in situ measurements of temporal and spatial variability of petroleum hydrocarbons in seawater. Results show that the optical fiber fluorometer system is capable of direct quantification of low level (parts-per-billion diesel fuel marine equivalent) concentrations of petroleum hydrocarbons. Analysis times for measurement of complete fluorescence emission spectra are fast (tens of milliseconds) and compare with the temporal response characteristics for temperature and conductivity sensors that are used for measuring standard physical hydrographic parameters. Results obtained with the fiber optic fluorometer system during a mapping study in San Diego Bay show good correlation with GC-MS analysis of total polycyclic aromatic hydrocarbons (PAHs) measured on discrete samples collected during the study.

  5. Retinal Imaging: Adaptive Optics

    NASA Astrophysics Data System (ADS)

    Goncharov, A. S.; Iroshnikov, N. G.; Larichev, Andrey V.

    This chapter describes several factors influencing the performance of ophthalmic diagnostic systems with adaptive optics compensation of human eye aberration. Particular attention is paid to speckle modulation, temporal behavior of aberrations, and anisoplanatic effects. The implementation of a fundus camera with adaptive optics is considered.

  6. Experimental demonstration of a real-time high-throughput digital DC blocker for compensating ADC imperfections in optical fast-OFDM receivers.

    PubMed

    Zhang, Lu; Ouyang, Xing; Shao, Xiaopeng; Zhao, Jian

    2016-06-27

    Performance degradation induced by the DC components at the output of real-time analogue-to-digital converter (ADC) is experimentally investigated for optical fast-OFDM receiver. To compensate this degradation, register transfer level (RTL) circuits for real-time digital DC blocker with 20GS/s throughput are proposed and implemented in field programmable gate array (FPGA). The performance of the proposed real-time digital DC blocker is experimentally investigated in a 15Gb/s optical fast-OFDM system with intensity modulation and direct detection over 40 km standard single-mode fibre. The results show that the fixed-point DC blocker has negligible performance penalty compared to the offline floating point one, and can overcome the error floor of the fast OFDM receiver caused by the DC components from the real-time ADC output. PMID:27410579

  7. Adaptive error detection for HDR/PDR brachytherapy: Guidance for decision making during real-time in vivo point dosimetry

    SciTech Connect

    Kertzscher, Gustavo Andersen, Claus E.; Tanderup, Kari

    2014-05-15

    Purpose: This study presents an adaptive error detection algorithm (AEDA) for real-timein vivo point dosimetry during high dose rate (HDR) or pulsed dose rate (PDR) brachytherapy (BT) where the error identification, in contrast to existing approaches, does not depend on an a priori reconstruction of the dosimeter position. Instead, the treatment is judged based on dose rate comparisons between measurements and calculations of the most viable dosimeter position provided by the AEDA in a data driven approach. As a result, the AEDA compensates for false error cases related to systematic effects of the dosimeter position reconstruction. Given its nearly exclusive dependence on stable dosimeter positioning, the AEDA allows for a substantially simplified and time efficient real-time in vivo BT dosimetry implementation. Methods: In the event of a measured potential treatment error, the AEDA proposes the most viable dosimeter position out of alternatives to the original reconstruction by means of a data driven matching procedure between dose rate distributions. If measured dose rates do not differ significantly from the most viable alternative, the initial error indication may be attributed to a mispositioned or misreconstructed dosimeter (false error). However, if the error declaration persists, no viable dosimeter position can be found to explain the error, hence the discrepancy is more likely to originate from a misplaced or misreconstructed source applicator or from erroneously connected source guide tubes (true error). Results: The AEDA applied on twoin vivo dosimetry implementations for pulsed dose rate BT demonstrated that the AEDA correctly described effects responsible for initial error indications. The AEDA was able to correctly identify the major part of all permutations of simulated guide tube swap errors and simulated shifts of individual needles from the original reconstruction. Unidentified errors corresponded to scenarios where the dosimeter position was

  8. Efficient Hardware Implementation of the Horn-Schunck Algorithm for High-Resolution Real-Time Dense Optical Flow Sensor

    PubMed Central

    Komorkiewicz, Mateusz; Kryjak, Tomasz; Gorgon, Marek

    2014-01-01

    This article presents an efficient hardware implementation of the Horn-Schunck algorithm that can be used in an embedded optical flow sensor. An architecture is proposed, that realises the iterative Horn-Schunck algorithm in a pipelined manner. This modification allows to achieve data throughput of 175 MPixels/s and makes processing of Full HD video stream (1, 920 × 1, 080 @ 60 fps) possible. The structure of the optical flow module as well as pre- and post-filtering blocks and a flow reliability computation unit is described in details. Three versions of optical flow modules, with different numerical precision, working frequency and obtained results accuracy are proposed. The errors caused by switching from floating- to fixed-point computations are also evaluated. The described architecture was tested on popular sequences from an optical flow dataset of the Middlebury University. It achieves state-of-the-art results among hardware implementations of single scale methods. The designed fixed-point architecture achieves performance of 418 GOPS with power efficiency of 34 GOPS/W. The proposed floating-point module achieves 103 GFLOPS, with power efficiency of 24 GFLOPS/W. Moreover, a 100 times speedup compared to a modern CPU with SIMD support is reported. A complete, working vision system realized on Xilinx VC707 evaluation board is also presented. It is able to compute optical flow for Full HD video stream received from an HDMI camera in real-time. The obtained results prove that FPGA devices are an ideal platform for embedded vision systems. PMID:24526303

  9. Efficient hardware implementation of the Horn-Schunck algorithm for high-resolution real-time dense optical flow sensor.

    PubMed

    Komorkiewicz, Mateusz; Kryjak, Tomasz; Gorgon, Marek

    2014-01-01

    This article presents an efficient hardware implementation of the Horn-Schunck algorithm that can be used in an embedded optical flow sensor. An architecture is proposed, that realises the iterative Horn-Schunck algorithm in a pipelined manner. This modification allows to achieve data throughput of 175 MPixels/s and makes processing of Full HD video stream (1; 920 × 1; 080 @ 60 fps) possible. The structure of the optical flow module as well as pre- and post-filtering blocks and a flow reliability computation unit is described in details. Three versions of optical flow modules, with different numerical precision, working frequency and obtained results accuracy are proposed. The errors caused by switching from floating- to fixed-point computations are also evaluated. The described architecture was tested on popular sequences from an optical flow dataset of the Middlebury University. It achieves state-of-the-art results among hardware implementations of single scale methods. The designed fixed-point architecture achieves performance of 418 GOPS with power efficiency of 34 GOPS/W. The proposed floating-point module achieves 103 GFLOPS, with power efficiency of 24 GFLOPS/W. Moreover, a 100 times speedup compared to a modern CPU with SIMD support is reported. A complete, working vision system realized on Xilinx VC707 evaluation board is also presented. It is able to compute optical flow for Full HD video stream received from an HDMI camera in real-time. The obtained results prove that FPGA devices are an ideal platform for embedded vision systems. PMID:24526303

  10. Reliability aspects of the future hybrid optical network and quality of service issues for real time and packet traffic

    NASA Astrophysics Data System (ADS)

    Marciniak, Marian

    2004-09-01

    While Internet traffic increases dramatically and now it exceeds the almost stable voice traffic, new efficient solutions for network architecture are sought. One of the main problems to be resolved is the basic concept of the future network performance. While actual networks are based on 'circuit switching' connection networks with IP packets forwarded given the network offers some free resources, a number of researchers foresee the future network as a 'packet switched' connectionless network which would support also the traditional real time services with phone calls as the most representative example. This is driven by the growing use of voice over IP services. Unfortunately, the Quality of Service is actually not sufficient for wide acceptance of that technique. In fact, Internet is based on the 'best-effort' principle in what it fudamentally differs from circuit-switched network which has been developed uniquely to provide excellent voice quality during last century. Moreover, the reliability of the network is a crucial factor in emergency communications, what has recently became a subject of intense activity at national and international scale. As a consequence, the idea of dropping the converged network with voice-over-IP concept is hard to accept for a great majority and those expressing it are usually looked as strange or even dangerous individuals. Nevertheless, those fundamental difficulties become obvious for a growing number of people who approach the future network evolution more fundamentally, and try to trace reasonable and economic ways of the future network development. The author of this paper has extensively developed a concept of a "hybrid network" which consists of real-time subnetwork and packet network separated in the optical frequency domain that will be discussed in detail in this paper. This optimized network concept is intended to guarantee both reliability of the network and Quality of Service as well.

  11. In Site Analysis of a High Temperature Cure Reaction in Real Time Using Modulated Fiber-Optic FT-Raman Spectroscopy

    NASA Technical Reports Server (NTRS)

    Cooper, John; Aust, Jeffrey F.; Wise, Kent L.; Jensen, Brian J.

    1999-01-01

    The vibrational spectrum of a high temperature (330 C) polymerization reaction was successfully monitored in real time using a modulated fiber-optic FT-Raman spectrometer. A phenylethynyl terminated monomer was cured, and spectral evidence for two different reaction products was acquired. The products are a conjugated polyene chain and a cyclized trimer. This is the first report describing the use of FT-Raman spectroscopy to monitor a high temperature (greater than 250 C) reaction in real time.

  12. Large-strain optical fiber sensing and real-time FEM updating of steel structures under the high temperature effect

    NASA Astrophysics Data System (ADS)

    Huang, Ying; Fang, Xia; Bevans, Wesley James; Zhou, Zhi; Xiao, Hai; Chen, Genda

    2013-01-01

    Steel buildings are subjected to fire hazards during or immediately after a major earthquake. Under combined gravity and thermal loads, they have non-uniformly distributed stiffness and strength, and thus collapse progressively with large deformation. In this study, large-strain optical fiber sensors for high temperature applications and a temperature-dependent finite element model updating method are proposed for accurate prediction of structural behavior in real time. The optical fiber sensors can measure strains up to 10% at approximately 700 °C. Their measurements are in good agreement with those from strain gauges up to 0.5%. In comparison with the experimental results, the proposed model updating method can reduce the predicted strain errors from over 75% to below 20% at 800 °C. The minimum number of sensors in a fire zone that can properly characterize the vertical temperature distribution of heated air due to the gravity effect should be included in the proposed model updating scheme to achieve a predetermined simulation accuracy.

  13. GPU accelerated real-time multi-functional spectral-domain optical coherence tomography system at 1300 nm.

    PubMed

    Wang, Yan; Oh, Christian M; Oliveira, Michael C; Islam, M Shahidul; Ortega, Arthur; Park, B Hyle

    2012-07-01

    We present a GPU accelerated multi-functional spectral domain optical coherence tomography system at 1300 nm. The system is capable of real-time processing and display of every intensity image, comprised of 512 pixels by 2048 A-lines acquired at 20 frames per second. The update rate for all four images with size of 512 pixels by 2048 A-lines simultaneously (intensity, phase retardation, flow and en face view) is approximately 10 frames per second. Additionally, we report for the first time the characterization of phase retardation and diattenuation by a sample comprised of a stacked set of polarizing film and wave plate. The calculated optic axis orientation, phase retardation and diattenuation match well with expected values. The speed of each facet of the multi-functional OCT CPU-GPU hybrid acquisition system, intensity, phase retardation, and flow, were separately demonstrated by imaging a horseshoe crab lateral compound eye, a non-uniformly heated chicken muscle, and a microfluidic device. A mouse brain with thin skull preparation was imaged in vivo and demonstrated the capability of the system for live multi-functional OCT visualization. PMID:22772175

  14. In vivo imaging of dynamic biological specimen by real-time single-shot full-field optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Hrebesh, Molly Subhash; Dabu, Razvan; Sato, Manabu

    2009-02-01

    We demonstrate the feasibility of a compact single-shot full-field time domain optical coherence tomography (OCT) for imaging dynamic biological sample in real-time. The system is based on a Linnik type polarization Michelson interferometer and a four-quadrature phase-stepper optics, which can simultaneously capture four quadraturely phase-stepped interferograms on a single CCD. Using a superluminescent diode as light source with center wavelength of 842 nm and spectral width of 16.2 nm, the system yields an axial resolution of 19.8 μm, and covers a field of view of 280 × 320 μm2 (220 × 250 pixels) with a transverse resolution of 4.4 μm by using a 10× microscope objective (0.3 NA). Three-dimensional OCT images of biological samples such as an onion slice and a diaptomus were obtained without any image averaging or pixel binning. In addition, in vivo depth resolved dynamic imaging was demonstrated to show the beating internal structure of a diaptomus with a fame rate of 5 fps.

  15. Hybrid optoacoustic and ultrasound imaging in three dimensions and real time by optical excitation of a passive element

    NASA Astrophysics Data System (ADS)

    Fehm, Thomas F.; Deán-Ben, Xosé L.; Razansky, Daniel

    2015-03-01

    Pulse-echo ultrasound and optoacoustic imaging possess very different, yet highly complementary, advantages of mechanical and optical contrast in living tissues. Integration of pulse-echo ultrasound with optoacoustic imaging may therefore significantly enhance the potential range of clinical applications. Nonetheless, efficient integration of these modalities remains challenging owing to the fundamental differences in the underlying physical contrast, optimal signal acquisition and image reconstruction approaches. We report on a new method for hybrid three-dimensional optoacoustic and pulse-echo ultrasound imaging based on passive generation of ultrasound with a spherical optical absorber, thus avoiding the hardware complexity of active ultrasound generation. The proposed approach allows for acquisition of complete hybrid datasets with a single laser interrogation pulse, resulting in simultaneous rendering of ultrasound and optoacoustic images at a rate of 10 volumetric frames per second. Real time image rendering for both modalities is enabled by using parallel GPU-based implementation of the reconstruction algorithms. Performance is first characterized in tubing phantoms followed by in vivo measurements in healthy human volunteers, confirming general clinical applicability of the method.

  16. The aquatic real-time monitoring network; in-situ optical sensors for monitoring the nation's water quality

    USGS Publications Warehouse

    Pellerin, Brian A.; Bergamaschi, Brian A.; Murdoch, Peter S.; Downing, Bryan D.; Saraceno, John Franco; Aiken, George R.; Striegl, Robert G.

    2011-01-01

    Floods, hurricanes, and longer-term changes in climate and land use can have profound effects on water quality due to shifts in hydrologic flow paths, water residence time, precipitation patterns, connectivity between rivers and uplands, and many other factors. In order to understand and respond to changes in hydrology and water quality, resource managers and policy makers have a need for accurate and early indicators, as well as the ability to assess possible mechanisms and likely outcomes. In-situ optical sensors-those making continuous measurements of constituents by absorbance or fluorescence properties in the environment at timescales of minutes to years-have a long history in oceanography for developing highly resolved concentrations and fluxes, but are not commonly used in freshwater systems. The United States Geological Survey (USGS) has developed the Aquatic Real-Time Monitoring Network, with high-resolution optical data collection for organic carbon, nutrients, and sediment in large coastal rivers, along with continuous measurements of discharge, water temperature, and dissolved inorganic carbon. The collecting of continuous water-quality data in the Nation?s waterways has revealed temporal trends and spatial patterns in constituents that traditional sampling approaches fail to capture, and will serve a critical role in monitoring, assessment and decision-making in a rapidly changing landscape.

  17. Volmer-Weber growth stages of polycrystalline metal films probed by in situ and real-time optical diagnostics

    NASA Astrophysics Data System (ADS)

    Abadias, G.; Simonot, L.; Colin, J. J.; Michel, A.; Camelio, S.; Babonneau, D.

    2015-11-01

    The Volmer-Weber growth of high-mobility metal films is associated with the development of a complex compressive-tensile-compressive stress behavior as the film deposition proceeds through nucleation of islands, coalescence, and formation of a continuous layer. The tensile force maximum has been attributed to the end of the islands coalescence stage, based on ex situ morphological observations. However, microstructural rearrangements are likely to occur in such films during post-deposition, somewhat biasing interpretations solely based on ex situ analysis. Here, by combining two simultaneous in situ and real-time optical sensing techniques, based on surface differential reflectance spectroscopy (SDRS) and change in wafer curvature probed by multibeam optical stress sensor (MOSS), we provide direct evidence that film continuity does coincide with tensile stress maximum during sputter deposition of a series of metal (Ag, Au, and Pd) films on amorphous SiOx. Stress relaxation after growth interruption was testified from MOSS, whose magnitude scaled with adatom mobility, while no change in SDRS signal could be revealed, ruling out possible changes of the surface roughness at the micron scale.

  18. WE-G-BRD-03: Development of a Real-Time Optical Tracking Goggle System (OTGS) for Intracranial Stereotactic Radiotherapy

    SciTech Connect

    Mittauer, K; Yan, G; Lu, B; Barraclough, B; Li, J; Liu, C

    2014-06-15

    Purpose: Optical tracking systems (OTS) are an acceptable alternative to frame-based stereotactic radiotherapy (SRT). However, current surface-based OTS lack the ability to target exclusively rigid/bony anatomical features. We propose a novel marker-based optical tracking goggle system (OTGS) that provides real-time guidance based on the nose/facial bony anatomy. This ongoing study involves the development and characterization of the OTGS for clinical implementation in intracranial stereotactic radiotherapy. Methods: The OTGS consists of eye goggles, a custom thermoplastic nosepiece, and 6 infrared markers pre-attached to the goggles. A phantom and four healthy volunteers were used to evaluate the calibration/registration accuracy, intrafraction accuracy, interfraction reproducibility, and end-to-end accuracy of the OTGS. The performance of the OTGS was compared with that of the frameless SonArray system and cone-beam computed tomography (CBCT) for volunteer and phantom cases, respectively. The performance of the OTGS with commercial immobilization devices and under treatment conditions (i.e., couch rotation and translation range) was also evaluated. Results: The difference in the calibration/registration accuracy of 24 translations or rotation combinations between CBCT and in-house OTS software was within 0.5 mm/0.4°. The mean intrafraction and interfraction accuracy among the volunteers was 0.004+/−0.4mm with −0.09+/−0.5° (n=6,170) and −0.26+/−0.8mm with 0.15+/0.8° (n=11), respectively. The difference in end-to-end accuracy between the OTGS and CBCT was within 1.3 mm/1.1°. The predetermined marker pattern (1) minimized marker occlusions, (2) allowed for continuous tracking for couch angles +/− 90°, (3) and eliminated individual marker misplacement. The device was feasible with open and half masks for immobilization. Conclusion: Bony anatomical localization eliminated potential errors due to facial hair changes and/or soft tissue deformation. The

  19. Adaptive optics revisited.

    PubMed

    Babcock, H W

    1990-07-20

    From the earliest days and nights of telescopic astronomy, atmospheric turbulence has been a serious detriment to optical performance. The new technology of adaptive optics can overcome this problem by compensating for the wavefront distortion that results from turbulence. The result will be large gains in resolving power and limiting magnitude, closely approaching the theoretical limit. In other words, telescopic images will be very significantly sharpened. Rapid and accelerating progress is being made today by several groups. Adaptive optics, together with the closely related technology of active optics, seems certain to be utilized in large astronomical telescopes of the future. This may entail significant changes in telescope design. PMID:17750109

  20. Tubular optical waveguide particle plasmon resonance biosensor for multiplex real-time and label-free detection

    NASA Astrophysics Data System (ADS)

    Huang, Chen-Han; Lin, Hsing-Ying; Chau, Lai-Kwan

    2013-05-01

    A tubular optical waveguide particle plasmon resonance (TW-PPR) sensor is demonstrated for higher-throughput and sensitive label-free biochemical detections. Compared to other evanescent field absorption sensors, the TW-PPR sensor possesses merits of itself being a microchamber of a defined sample volume, a mechanical support for sensor coatings, and ease of systematic multichannel expansion. The sensor resolution is estimated to be 2.6 × 10-6 RIU in measuring solutions of various refractive indices (RIs). Additionally, the multichannel TW-PPR sensing system can perform independent measurements simultaneously and its limit of detection (LOD) of anti-DNP antibody and streptavidin separately measured by DNP-functionalized and biotin-functionalized TW-PPR microchambers is demonstrated to be 1.21 × 10-10 and 2.27 × 10-10 g/ml, respectively. Accurate determinations of these molecules with known concentrations spiked in artificial urine are examined and the sensor responses give excellent correlation with results demonstrated in standard buffer examinations, supporting the utility of the device for analyte screening in more complex media. The TWPPR sensor can be inexpensively fabricated and has a special niche as high-sensitivity refractive index sensor as well as biosensor for label-free monitoring biomolecular interactions in real-time. It is ideally suitable for disposable uses, especially promising for convenient higher-throughput biochemical sensing applications.

  1. Fiber-optic detector for real time dosimetry of a micro-planar x-ray beam

    PubMed Central

    Belley, Matthew D.; Stanton, Ian N.; Hadsell, Mike; Ger, Rachel; Langloss, Brian W.; Lu, Jianping; Zhou, Otto; Chang, Sha X.; Therien, Michael J.; Yoshizumi, Terry T.

    2015-01-01

    Purpose: Here, the authors describe a dosimetry measurement technique for microbeam radiation therapy using a nanoparticle-terminated fiber-optic dosimeter (nano-FOD). Methods: The nano-FOD was placed in the center of a 2 cm diameter mouse phantom to measure the deep tissue dose and lateral beam profile of a planar x-ray microbeam. Results: The continuous dose rate at the x-ray microbeam peak measured with the nano-FOD was 1.91 ± 0.06 cGy s−1, a value 2.7% higher than that determined via radiochromic film measurements (1.86 ± 0.15 cGy s−1). The nano-FOD-determined lateral beam full-width half max value of 420 μm exceeded that measured using radiochromic film (320 μm). Due to the 8° angle of the collimated microbeam and resulting volumetric effects within the scintillator, the profile measurements reported here are estimated to achieve a resolution of ∼0.1 mm; however, for a beam angle of 0°, the theoretical resolution would approach the thickness of the scintillator (∼0.01 mm). Conclusions: This work provides proof-of-concept data and demonstrates that the novel nano-FOD device can be used to perform real-time dosimetry in microbeam radiation therapy to measure the continuous dose rate at the x-ray microbeam peak as well as the lateral beam shape. PMID:25832087

  2. A Real-Time Orbit Determination Method for Smooth Transition from Optical Tracking to Laser Ranging of Debris

    PubMed Central

    Li, Bin; Sang, Jizhang; Zhang, Zhongping

    2016-01-01

    A critical requirement to achieve high efficiency of debris laser tracking is to have sufficiently accurate orbit predictions (OP) in both the pointing direction (better than 20 arc seconds) and distance from the tracking station to the debris objects, with the former more important than the latter because of the narrow laser beam. When the two line element (TLE) is used to provide the orbit predictions, the resultant pointing errors are usually on the order of tens to hundreds of arc seconds. In practice, therefore, angular observations of debris objects are first collected using an optical tracking sensor, and then used to guide the laser beam pointing to the objects. The manual guidance may cause interrupts to the laser tracking, and consequently loss of valuable laser tracking data. This paper presents a real-time orbit determination (OD) and prediction method to realize smooth and efficient debris laser tracking. The method uses TLE-computed positions and angles over a short-arc of less than 2 min as observations in an OD process where simplified force models are considered. After the OD convergence, the OP is performed from the last observation epoch to the end of the tracking pass. Simulation and real tracking data processing results show that the pointing prediction errors are usually less than 10″, and the distance errors less than 100 m, therefore, the prediction accuracy is sufficient for the blind laser tracking. PMID:27347958

  3. A Real-Time Orbit Determination Method for Smooth Transition from Optical Tracking to Laser Ranging of Debris.

    PubMed

    Li, Bin; Sang, Jizhang; Zhang, Zhongping

    2016-01-01

    A critical requirement to achieve high efficiency of debris laser tracking is to have sufficiently accurate orbit predictions (OP) in both the pointing direction (better than 20 arc seconds) and distance from the tracking station to the debris objects, with the former more important than the latter because of the narrow laser beam. When the two line element (TLE) is used to provide the orbit predictions, the resultant pointing errors are usually on the order of tens to hundreds of arc seconds. In practice, therefore, angular observations of debris objects are first collected using an optical tracking sensor, and then used to guide the laser beam pointing to the objects. The manual guidance may cause interrupts to the laser tracking, and consequently loss of valuable laser tracking data. This paper presents a real-time orbit determination (OD) and prediction method to realize smooth and efficient debris laser tracking. The method uses TLE-computed positions and angles over a short-arc of less than 2 min as observations in an OD process where simplified force models are considered. After the OD convergence, the OP is performed from the last observation epoch to the end of the tracking pass. Simulation and real tracking data processing results show that the pointing prediction errors are usually less than 10″, and the distance errors less than 100 m, therefore, the prediction accuracy is sufficient for the blind laser tracking. PMID:27347958

  4. Real-time pressure monitoring for dynamic control during paper mill operation using fiber optic pressure sensors

    NASA Astrophysics Data System (ADS)

    Fielder, Robert S.; Boyd, Clark; Palmer, Matthew; Eriksen, Oddbjørn

    2006-03-01

    Fiber optic pressure sensors were integrated into the grinding plates of an operational paper pulp mill for real-time monitoring of the pulp grinding process. On-line system monitoring will allow smart, active control of the grinding plates thereby improving the quality and consistency of the pulp produced. Sensors were constructed and calibrated for use in the harsh environment of an operating paper pulp grinder. The sensors were 1.65mm in diameter including titanium housing, and were installed directly into the grooves of the grinding plates. The sensing elements were flush-mounted with the wall and exposed to the wood pulp slurry. Nine sensors were calibrated up to 1000psi. During operation, pressure was sampled at 1.0MHz, and pressure spikes up to 175psi were observed. Pressure pulses measured are due to the relative motion between the grooves and channels on two pulp grinding plates. The consistency, size distribution, and quality of paper pulp exiting from the grinder are directly related to the distance between the channels on the two rotating elements. The pressure pulses produced are also proportional to the distance between channels. Therefore, by monitoring pressure fluctuations, grinding elements can be dynamically controlled thereby producing a "smart mill."

  5. Microvascular anastomosis guidance and evaluation using real-time three-dimensional Fourier-domain Doppler optical coherence tomography

    PubMed Central

    Ibrahim, Zuhaib; Tong, Dedi; Zhu, Shan; Mao, Qi; Pang, John; Andrew Lee, Wei Ping; Brandacher, Gerald; Kang, Jin U.

    2013-01-01

    Abstract. Vascular and microvascular anastomoses are critical components of reconstructive microsurgery, vascular surgery, and transplant surgery. Intraoperative surgical guidance using a surgical imaging modality that provides an in-depth view and three-dimensional (3-D) imaging can potentially improve outcome following both conventional and innovative anastomosis techniques. Objective postoperative imaging of the anastomosed vessel can potentially improve the salvage rate when combined with other clinical assessment tools, such as capillary refill, temperature, blanching, and skin turgor. Compared to other contemporary postoperative monitoring modalities—computed tomography angiograms, magnetic resonance (MR) angiograms, and ultrasound Doppler—optical coherence tomography (OCT) is a noninvasive high-resolution (micron-level), high-speed, 3-D imaging modality that has been adopted widely in biomedical and clinical applications. For the first time, to the best of our knowledge, the feasibility of real-time 3-D phase-resolved Doppler OCT (PRDOCT) as an assisted intra- and postoperative imaging modality for microvascular anastomosis of rodent femoral vessels is demonstrated, which will provide new insights and a potential breakthrough to microvascular and supermicrovascular surgery. PMID:23856833

  6. Rapid Fiber-optic Raman Spectroscopy for Real-Time In Vivo Detection of Gastric Intestinal Metaplasia during Clinical Gastroscopy.

    PubMed

    Lin, Kan; Wang, Jianfeng; Zheng, Wei; Ho, Khek Yu; Teh, Ming; Yeoh, Khay Guan; Huang, Zhiwei

    2016-06-01

    We report a unique simultaneous fingerprint (FP) and high-wavenumber (HW) Raman spectroscopy technique coupled with a beveled fiber-optic Raman probe for improving in vivo detection of gastric intestinal metaplasia (IM)-precancerous lesions in real-time during clinical gastroscopy. A total of 4,520 high-quality in vivo FP/HW gastric Raman spectra (normal = 4,178; IM = 342) were acquired from 157 gastric patients undergoing endoscopic examination. Multivariate diagnostic algorithms based on principal components analysis and linear discriminant analysis together with the leave-one tissue site-out, cross-validation on in vivo tissue Raman spectra yield the diagnostic sensitivities of 89.3%, 89.3%, and 75.0%; specificities of 92.2%, 84.4%, and 82.0%; positive predictive values of 52.1%, 35.2%, and 28.4%; and negative predictive values of 98.9%, 98.8%, and 97.2%, respectively, by using the integrated FP/HW, FP, and HW Raman techniques for identifying IM from normal gastric tissue. Further, ROC curves generated show that the integrated FP/HW Raman technique gives the integration area under the ROC curve of 0.92 for IM classification, which is superior to either FP (0.89) or HW Raman (0.86) technique alone. This work demonstrates for the first time that the simultaneous FP/HW fiber-optic Raman spectroscopy has great potential to enhance early diagnosis of gastric precancer in vivo during routine endoscopic examination. Cancer Prev Res; 9(6); 476-83. ©2016 AACR. PMID:27034388

  7. Three Experiments Examining the Use of Electroencephalogram,Event-Related Potentials, and Heart-Rate Variability for Real-Time Human-Centered Adaptive Automation Design

    NASA Technical Reports Server (NTRS)

    Prinzel, Lawrence J., III; Parasuraman, Raja; Freeman, Frederick G.; Scerbo, Mark W.; Mikulka, Peter J.; Pope, Alan T.

    2003-01-01

    Adaptive automation represents an advanced form of human-centered automation design. The approach to automation provides for real-time and model-based assessments of human-automation interaction, determines whether the human has entered into a hazardous state of awareness and then modulates the task environment to keep the operator in-the-loop , while maintaining an optimal state of task engagement and mental alertness. Because adaptive automation has not matured, numerous challenges remain, including what the criteria are, for determining when adaptive aiding and adaptive function allocation should take place. Human factors experts in the area have suggested a number of measures including the use of psychophysiology. This NASA Technical Paper reports on three experiments that examined the psychophysiological measures of event-related potentials, electroencephalogram, and heart-rate variability for real-time adaptive automation. The results of the experiments confirm the efficacy of these measures for use in both a developmental and operational role for adaptive automation design. The implications of these results and future directions for psychophysiology and human-centered automation design are discussed.

  8. Telescope Adaptive Optics Code

    2005-07-28

    The Telescope AO Code has general adaptive optics capabilities plus specialized models for three telescopes with either adaptive optics or active optics systems. It has the capability to generate either single-layer or distributed Kolmogorov turbulence phase screens using the FFT. Missing low order spatial frequencies are added using the Karhunen-Loeve expansion. The phase structure curve is extremely dose to the theoreUcal. Secondly, it has the capability to simulate an adaptive optics control systems. The defaultmore » parameters are those of the Keck II adaptive optics system. Thirdly, it has a general wave optics capability to model the science camera halo due to scintillation from atmospheric turbulence and the telescope optics. Although this capability was implemented for the Gemini telescopes, the only default parameter specific to the Gemini telescopes is the primary mirror diameter. Finally, it has a model for the LSST active optics alignment strategy. This last model is highly specific to the LSST« less

  9. Real-Time Adaptive Lossless Hyperspectral Image Compression using CCSDS on Parallel GPGPU and Multicore Processor Systems

    NASA Technical Reports Server (NTRS)

    Hopson, Ben; Benkrid, Khaled; Keymeulen, Didier; Aranki, Nazeeh; Klimesh, Matt; Kiely, Aaron

    2012-01-01

    The proposed CCSDS (Consultative Committee for Space Data Systems) Lossless Hyperspectral Image Compression Algorithm was designed to facilitate a fast hardware implementation. This paper analyses that algorithm with regard to available parallelism and describes fast parallel implementations in software for GPGPU and Multicore CPU architectures. We show that careful software implementation, using hardware acceleration in the form of GPGPUs or even just multicore processors, can exceed the performance of existing hardware and software implementations by up to 11x and break the real-time barrier for the first time for a typical test application.

  10. Real-time polarization mode dispersion monitoring system for a multiple-erbium-doped fiber amplifier, dense wavelength division multiplexing optical fiber transmission by amplified spontaneous emission modulation and acousto-optic tunable fiber scanning techniques.

    PubMed

    Tseng, Bao-Jang; Tarn, Chen-Wen

    2009-03-01

    Without interruption or affecting the transmission of ordinary payload channels, we propose a real time polarization mode dispersion (PMD) monitoring system for long-haul, multiple erbium-doped fiber amplifier (EDFA), dense wavelength division multiplexing (DWDM) optical fiber transmission using modulated amplified spontaneous emission (ASE) of one of the EDFAs as the supervisory (SV) signal source. An acousto-optic tunable filter (AOTF) at the receiver side is adopted to scan the spectrum of the transmitted ASE SV signal. Using the fixed-analyzer method, PMDs of different wavelength bands that range from 1545 to 1580 nm of a DWDM fiber-optic communication system can be found by adaptively changing the radio frequency of the AOTF. The resolution and the measuring range of the proposed monitoring system can be significantly improved by cascading the AOTFs at the receiver side. PMID:19252622

  11. Adaptive Optics at Lawrence Livermore National Laboratory

    SciTech Connect

    Gavel, D T

    2003-03-10

    Adaptive optics enables high resolution imaging through the atmospheric by correcting for the turbulent air's aberrations to the light waves passing through it. The Lawrence Livermore National Laboratory for a number of years has been at the forefront of applying adaptive optics technology to astronomy on the world's largest astronomical telescopes, in particular at the Keck 10-meter telescope on Mauna Kea, Hawaii. The technology includes the development of high-speed electrically driven deformable mirrors, high-speed low-noise CCD sensors, and real-time wavefront reconstruction and control hardware. Adaptive optics finds applications in many other areas where light beams pass through aberrating media and must be corrected to maintain diffraction-limited performance. We describe systems and results in astronomy, medicine (vision science), and horizontal path imaging, all active programs in our group.

  12. Intraoperative optical coherence tomography using an optimized reflective optical relay, real-time heads-up display, and semitransparent surgical instrumentation

    NASA Astrophysics Data System (ADS)

    Tao, Yuankai K.; El-Haddad, Mohamed T.; Srivastava, Sunil K.; Feiler, Daniel; Noonan, Amanda I.; Rollins, Andrew M.; Ehlers, Justis P.

    2015-03-01

    Ophthalmic surgical maneuvers are currently limited by the ability of surgeons to visualize and manipulate semitransparent tissue layers as thin as tens of microns. We describe several iterative advances in iOCT technology, including a novel iOCT system, real-time heads-up display (HUD) feedback, visualization of intraoperative maneuvers, and OCT-compatible surgical instrumentation. Simulated surgical maneuvers were performed on freshly enucleated porcine eyes. Subretinal space cannulation with injection was performed and imaged using spatial compounding. The optical properties of semitransparent materials were quantified to identify OCT-compatible substrates, and surgical instrument prototypes were machined, including corneal, surgical picks, and retinal forceps.

  13. Fiber-optic detector for real time dosimetry of a micro-planar x-ray beam

    SciTech Connect

    Belley, Matthew D.; Stanton, Ian N.; Langloss, Brian W.; Therien, Michael J.; Hadsell, Mike; Ger, Rachel; Lu, Jianping; Zhou, Otto; Chang, Sha X.; Yoshizumi, Terry T.

    2015-04-15

    Purpose: Here, the authors describe a dosimetry measurement technique for microbeam radiation therapy using a nanoparticle-terminated fiber-optic dosimeter (nano-FOD). Methods: The nano-FOD was placed in the center of a 2 cm diameter mouse phantom to measure the deep tissue dose and lateral beam profile of a planar x-ray microbeam. Results: The continuous dose rate at the x-ray microbeam peak measured with the nano-FOD was 1.91 ± 0.06 cGy s{sup −1}, a value 2.7% higher than that determined via radiochromic film measurements (1.86 ± 0.15 cGy s{sup −1}). The nano-FOD-determined lateral beam full-width half max value of 420 μm exceeded that measured using radiochromic film (320 μm). Due to the 8° angle of the collimated microbeam and resulting volumetric effects within the scintillator, the profile measurements reported here are estimated to achieve a resolution of ∼0.1 mm; however, for a beam angle of 0°, the theoretical resolution would approach the thickness of the scintillator (∼0.01 mm). Conclusions: This work provides proof-of-concept data and demonstrates that the novel nano-FOD device can be used to perform real-time dosimetry in microbeam radiation therapy to measure the continuous dose rate at the x-ray microbeam peak as well as the lateral beam shape.

  14. Thin, nearly wireless adaptive optical device

    NASA Technical Reports Server (NTRS)

    Knowles, Gareth (Inventor); Hughes, Eli (Inventor)

    2008-01-01

    A thin, nearly wireless adaptive optical device capable of dynamically modulating the shape of a mirror in real time to compensate for atmospheric distortions and/or variations along an optical material is provided. The device includes an optical layer, a substrate, at least one electronic circuit layer with nearly wireless architecture, an array of actuators, power electronic switches, a reactive force element, and a digital controller. Actuators are aligned so that each axis of expansion and contraction intersects both substrate and reactive force element. Electronics layer with nearly wireless architecture, power electronic switches, and digital controller are provided within a thin-film substrate. The size and weight of the adaptive optical device is solely dominated by the size of the actuator elements rather than by the power distribution system.

  15. Thin, nearly wireless adaptive optical device

    NASA Technical Reports Server (NTRS)

    Knowles, Gareth (Inventor); Hughes, Eli (Inventor)

    2007-01-01

    A thin, nearly wireless adaptive optical device capable of dynamically modulating the shape of a mirror in real time to compensate for atmospheric distortions and/or variations along an optical material is provided. The device includes an optical layer, a substrate, at least one electronic circuit layer with nearly wireless architecture, an array of actuators, power electronic switches, a reactive force element, and a digital controller. Actuators are aligned so that each axis of expansion and contraction intersects both substrate and reactive force element. Electronics layer with nearly wireless architecture, power electronic switches, and digital controller are provided within a thin-film substrate. The size and weight of the adaptive optical device is solely dominated by the size of the actuator elements rather than by the power distribution system.

  16. Thin nearly wireless adaptive optical device

    NASA Technical Reports Server (NTRS)

    Knowles, Gareth J. (Inventor); Hughes, Eli (Inventor)

    2009-01-01

    A thin nearly wireless adaptive optical device capable of dynamically modulating the shape of a mirror in real time to compensate for atmospheric distortions and/or variations along an optical material is provided. The device includes an optical layer, a substrate, at least one electronic circuit layer with nearly wireless architecture, an array of actuators, power electronic switches, a reactive force element, and a digital controller. Actuators are aligned so that each axis of expansion and contraction intersects both substrate and reactive force element. Electronics layer with nearly wireless architecture, power electronic switches, and digital controller are provided within a thin-film substrate. The size and weight of the adaptive optical device is solely dominated by the size of the actuator elements rather than by the power distribution system.

  17. Robust Wiener filtering for Adaptive Optics

    SciTech Connect

    Poyneer, L A

    2004-06-17

    In many applications of optical systems, the observed field in the pupil plane has a non-uniform phase component. This deviation of the phase of the field from uniform is called a phase aberration. In imaging systems this aberration will degrade the quality of the images. In the case of a large astronomical telescope, random fluctuations in the atmosphere lead to significant distortion. These time-varying distortions can be corrected using an Adaptive Optics (AO) system, which is a real-time control system composed of optical, mechanical and computational parts. Adaptive optics is also applicable to problems in vision science, laser propagation and communication. For a high-level overview, consult this web site. For an in-depth treatment of the astronomical case, consult these books.

  18. In Situ Analysis of a High-Temperature Cure Reaction in Real Time Using Modulated Fiber-Optic FT-Raman Spectroscopy

    NASA Technical Reports Server (NTRS)

    Aust, Jeffrey F.; Cooper, John B.; Wise, Kent L.; Jensen, Brian J.

    1999-01-01

    The vibrational spectrum of a high-temperature (330 C) polymerization reaction was successfully monitored in real time with the use of a modulated fiber-optic Fourier transform (FT)-Raman spectrometer. A phenylethynyl-terminated monomer was cured, and spectral evidence for two different reaction products was acquired. The products are a conjugated polyene chain and a cyclized trimer. This is the first report describing the use of FT-Raman spectroscopy to monitor a high temperature (greater than 250 C) reaction in real time.

  19. Optical PEBBLE nanosensors and fiber optic sensors for real-time intracellular imaging and analysis of magnesium and oxygen

    NASA Astrophysics Data System (ADS)

    Park, Edwin J.

    A highly selective magnesium fluorescent optical nanosensor, made possible by PEBBLE (Probe Encapsulated By Biologically Localized Embedding) technology is presented. Ratiometric sensors were prepared, via a microemulsion polymerization process, by co-immobilizing a highly selective magnesium dye with a reference dye inside a polymer matrix. The resultant spherical sensors are ˜40 nm in diameter. Several dyes were investigated with coumarin 343 (C343) providing the best selectivity towards Mg2+ vs. ions such as Ca 2+, Na+, and K+. The dynamic range of the sensors was 1 to 30 mM (linear from 1 to 10 mM) with a response time of less than 4 s. The fully reversible sensors exhibit minimal leaching and photobleaching. In vitro intracellular changes in Mg2+ concentration were monitored in C6 Glioma cells. Preliminary experiments demonstrated the capability of these sensors thus they were used to investigate the PhoP/Q transmembrane protein system on the internal membrane of salmonella . The sensors were used to monitor the magnesium levels inside salmonella containing vacuoles. Previously believed hypotheses on changes in magnesium concentration are challenged with the newly obtained results. The selectivity for Mg2+ along with the biocompatibility of the matrix of these sensors provides a new and reliable tool for intracellular magnesium measurements. A second sensor platform was developed for the detection of intracellular dissolved oxygen, using a fiber optic probe. The design and fabrication of an oxygen fiber optic sensor based on the fluorescence quenching properties of the oxygen sensitive platinum (II) octaethylporphine ketone (PtOEPK) is presented. Octaethyl porphyrin (OEP) or bodipy maleimide 577/618, was also entrapped, as a reference dye, in a polyvinyl chloride matrix including the plasticizing agent bis 2-ethylhexyl sebacate (DOS). The multi mode fibers were pulled down to submicron dimensions and a dip coating procedure was used to apply the sensing

  20. The ERIS adaptive optics system

    NASA Astrophysics Data System (ADS)

    Marchetti, Enrico; Fedrigo, Enrico; Le Louarn, Miska; Madec, Pierre-Yves; Soenke, Christian; Brast, Roland; Conzelmann, Ralf; Delabre, Bernard; Duchateau, Michel; Frank, Christoph; Klein, Barbara; Amico, Paola; Hubin, Norbert; Esposito, Simone; Antichi, Jacopo; Carbonaro, Luca; Puglisi, Alfio; Quirós-Pacheco, Fernando; Riccardi, Armando; Xompero, Marco

    2014-07-01

    The Enhanced Resolution Imager and Spectrograph (ERIS) is the new Adaptive Optics based instrument for ESO's VLT aiming at replacing NACO and SINFONI to form a single compact facility with AO fed imaging and integral field unit spectroscopic scientific channels. ERIS completes the instrument suite at the VLT adaptive telescope. In particular it is equipped with a versatile AO system that delivers up to 95% Strehl correction in K band for science observations up to 5 micron It comprises high order NGS and LGS correction enabling the observation from exoplanets to distant galaxies with a large sky coverage thanks to the coupling of the LGS WFS with the high sensitivity of its visible WFS and the capability to observe in dust embedded environment thanks to its IR low order WFS. ERIS will be installed at the Cassegrain focus of the VLT unit hosting the Adaptive Optics Facility (AOF). The wavefront correction is provided by the AOF deformable secondary mirror while the Laser Guide Star is provided by one of the four launch units of the 4 Laser Guide Star Facility for the AOF. The overall layout of the ERIS AO system is extremely compact and highly optimized: the SPIFFI spectrograph is fed directly by the Cassegrain focus and both the NIX's (IR imager) and SPIFFI's entrance windows work as visible/infrared dichroics. In this paper we describe the concept of the ERIS AO system in detail, starting from the requirements and going through the estimated performance, the opto-mechanical design and the Real-Time Computer design.

  1. Real-time terahertz wave imaging by nonlinear optical frequency up-conversion in a 4-dimethylamino-N'-methyl-4'-stilbazolium tosylate crystal

    NASA Astrophysics Data System (ADS)

    Fan, Shuzhen; Qi, Feng; Notake, Takashi; Nawata, Kouji; Matsukawa, Takeshi; Takida, Yuma; Minamide, Hiroaki

    2014-03-01

    Real-time terahertz (THz) wave imaging has wide applications in areas such as security, industry, biology, medicine, pharmacy, and arts. In this letter, we report on real-time room-temperature THz imaging by nonlinear optical frequency up-conversion in organic 4-dimethylamino-N'-methyl-4'-stilbazolium tosylate crystal. The active projection-imaging system consisted of (1) THz wave generation, (2) THz-near-infrared hybrid optics, (3) THz wave up-conversion, and (4) an InGaAs camera working at 60 frames per second. The pumping laser system consisted of two optical parametric oscillators pumped by a nano-second frequency-doubled Nd:YAG laser. THz-wave images of handmade samples at 19.3 THz were taken, and videos of a sample moving and a ruler stuck with a black polyethylene film moving were supplied online to show real-time ability. Thanks to the high speed and high responsivity of this technology, real-time THz imaging with a higher signal-to-noise ratio than a commercially available THz micro-bolometer camera was proven to be feasible. By changing the phase-matching condition, i.e., by changing the wavelength of the pumping laser, we suggest THz imaging with a narrow THz frequency band of interest in a wide range from approximately 2 to 30 THz is possible.

  2. Adaptive optical processors.

    PubMed

    Ghosh, A

    1989-06-15

    There are two different approaches for improving the accuracy of analog optical associative processors: postprocessing with a bimodal system and preprocessing with a preconditioner. These two approaches can be combined to develop an adaptive optical multiprocessor that can adjust the computational steps depending on the data and produce solutions of linear algebra problems with a specified accuracy in a given amount of time. PMID:19752909

  3. OPTICAL AND MICROCANTILEVER-BASED SENSORS FOR REAL-TIME IN SITU CHARACTERIZATION OF HIGH-LEVEL WASTE

    EPA Science Inventory

    Fundamental research is being conducted to develop sensors for strontium that can be used in real-time to characterize high-level waste (HLW) process streams. Two fundamentally different approaches are being pursued, which have in common the dependence on highly selective molecul...

  4. FPGA-accelerated adaptive optics wavefront control

    NASA Astrophysics Data System (ADS)

    Mauch, S.; Reger, J.; Reinlein, C.; Appelfelder, M.; Goy, M.; Beckert, E.; Tünnermann, A.

    2014-03-01

    The speed of real-time adaptive optical systems is primarily restricted by the data processing hardware and computational aspects. Furthermore, the application of mirror layouts with increasing numbers of actuators reduces the bandwidth (speed) of the system and, thus, the number of applicable control algorithms. This burden turns out a key-impediment for deformable mirrors with continuous mirror surface and highly coupled actuator influence functions. In this regard, specialized hardware is necessary for high performance real-time control applications. Our approach to overcome this challenge is an adaptive optics system based on a Shack-Hartmann wavefront sensor (SHWFS) with a CameraLink interface. The data processing is based on a high performance Intel Core i7 Quadcore hard real-time Linux system. Employing a Xilinx Kintex-7 FPGA, an own developed PCie card is outlined in order to accelerate the analysis of a Shack-Hartmann Wavefront Sensor. A recently developed real-time capable spot detection algorithm evaluates the wavefront. The main features of the presented system are the reduction of latency and the acceleration of computation For example, matrix multiplications which in general are of complexity O(n3 are accelerated by using the DSP48 slices of the field-programmable gate array (FPGA) as well as a novel hardware implementation of the SHWFS algorithm. Further benefits are the Streaming SIMD Extensions (SSE) which intensively use the parallelization capability of the processor for further reducing the latency and increasing the bandwidth of the closed-loop. Due to this approach, up to 64 actuators of a deformable mirror can be handled and controlled without noticeable restriction from computational burdens.

  5. Real time on-chip sequential adaptive principal component analysis for data feature extraction and image compression

    NASA Technical Reports Server (NTRS)

    Duong, T. A.

    2004-01-01

    In this paper, we present a new, simple, and optimized hardware architecture sequential learning technique for adaptive Principle Component Analysis (PCA) which will help optimize the hardware implementation in VLSI and to overcome the difficulties of the traditional gradient descent in learning convergence and hardware implementation.

  6. A real-time regional adaptive exposure method for saving dose-area product in x-ray fluoroscopy

    PubMed Central

    Burion, Steve; Speidel, Michael A.; Funk, Tobias

    2013-01-01

    Purpose: Reduction of radiation dose in x-ray imaging has been recognized as a high priority in the medical community. Here the authors show that a regional adaptive exposure method can reduce dose-area product (DAP) in x-ray fluoroscopy. The authors' method is particularly geared toward providing dose savings for the pediatric population. Methods: The scanning beam digital x-ray system uses a large-area x-ray source with 8000 focal spots in combination with a small photon-counting detector. An imaging frame is obtained by acquiring and reconstructing up to 8000 detector images, each viewing only a small portion of the patient. Regional adaptive exposure was implemented by varying the exposure of the detector images depending on the local opacity of the object. A family of phantoms ranging in size from infant to obese adult was imaged in anteroposterior view with and without adaptive exposure. The DAP delivered to each phantom was measured in each case, and noise performance was compared by generating noise arrays to represent regional noise in the images. These noise arrays were generated by dividing the image into regions of about 6 mm2, calculating the relative noise in each region, and placing the relative noise value of each region in a one-dimensional array (noise array) sorted from highest to lowest. Dose-area product savings were calculated as the difference between the ratio of DAP with adaptive exposure to DAP without adaptive exposure. The authors modified this value by a correction factor that matches the noise arrays where relative noise is the highest to report a final dose-area product savings. Results: The average dose-area product saving across the phantom family was (42 ± 8)% with the highest dose-area product saving in the child-sized phantom (50%) and the lowest in the phantom mimicking an obese adult (23%). Conclusions: Phantom measurements indicate that a regional adaptive exposure method can produce large DAP savings without compromising the

  7. A real-time regional adaptive exposure method for saving dose-area product in x-ray fluoroscopy

    SciTech Connect

    Burion, Steve; Funk, Tobias; Speidel, Michael A.

    2013-05-15

    Purpose: Reduction of radiation dose in x-ray imaging has been recognized as a high priority in the medical community. Here the authors show that a regional adaptive exposure method can reduce dose-area product (DAP) in x-ray fluoroscopy. The authors' method is particularly geared toward providing dose savings for the pediatric population. Methods: The scanning beam digital x-ray system uses a large-area x-ray source with 8000 focal spots in combination with a small photon-counting detector. An imaging frame is obtained by acquiring and reconstructing up to 8000 detector images, each viewing only a small portion of the patient. Regional adaptive exposure was implemented by varying the exposure of the detector images depending on the local opacity of the object. A family of phantoms ranging in size from infant to obese adult was imaged in anteroposterior view with and without adaptive exposure. The DAP delivered to each phantom was measured in each case, and noise performance was compared by generating noise arrays to represent regional noise in the images. These noise arrays were generated by dividing the image into regions of about 6 mm{sup 2}, calculating the relative noise in each region, and placing the relative noise value of each region in a one-dimensional array (noise array) sorted from highest to lowest. Dose-area product savings were calculated as the difference between the ratio of DAP with adaptive exposure to DAP without adaptive exposure. The authors modified this value by a correction factor that matches the noise arrays where relative noise is the highest to report a final dose-area product savings. Results: The average dose-area product saving across the phantom family was (42 {+-} 8)% with the highest dose-area product saving in the child-sized phantom (50%) and the lowest in the phantom mimicking an obese adult (23%). Conclusions: Phantom measurements indicate that a regional adaptive exposure method can produce large DAP savings without

  8. Terbium-doped gadolinium oxysulfide (Gd2O2S:Tb) scintillation-based polymer optical fibre sensor for real time monitoring of radiation dose in oncology

    NASA Astrophysics Data System (ADS)

    Lewis, E.; O'Keeffe, S.; Grattan, M.; Hounsell, A.; McCarthy, D.; Woulfe, P.; Cronin, J.; Mihai, L.; Sporea, D.; Santhanam, A.; Agazaryan, N.

    2014-05-01

    A PMMA based plastic optical fibre sensor for use in real time radiotherapy dosimetry is presented. The optical fibre tip is coated with a scintillation material, terbium-doped gadolinium oxysulfide (Gd2O2S:Tb), which fluoresces when exposed to ionising radiation (X-Ray). The emitted visible light signal penetrates the sensor optical fibre and propagates along the transmitting fibre at the end of which it is remotely monitored using a fluorescence spectrometer. The results demonstrate good repeatability, with a maximum percentage error of 0.5% and the response is independent of dose rate.

  9. Real-time single-shot three-dimensional and contrast-enhanced optical coherence imaging using phase coherent photorefractive quantum wells

    NASA Astrophysics Data System (ADS)

    Kabir, A.; Dongol, A.; Wang, X.; Wagner, H. P.

    2010-12-01

    We demonstrate two real-time optical coherence imaging acquisition modes using all-optical phase coherent photorefractive ZnSe quantum wells as dynamic holographic films. These films use the coherence of excitons for time-gating which provides depth information of an object according to the brightness profile of its holographic image. This quality allows depth-resolved imaging of moving particles with a resolution of a few micrometers in a single-shot three-dimensional mode. In a complementary contrast-enhanced mode moving particles are imaged by the local enhancement of a static reference hologram, enabling optical coherence imaging at a large depth-of-field.

  10. Real-Time Assessment of Autonomic Nerve Activity During Adaptive Servo-Ventilation Support or Waon Therapy.

    PubMed

    Imamura, Teruhiko; Kinugawa, Koichiro; Nitta, Daisuke; Komuro, Issei

    2016-07-27

    Adaptive servo-ventilation support and Waon therapy are recently developed non-pharmacological and noninvasive therapies for patients with heart failure refractory to guideline-directed medical therapy. These therapies decrease both preload and afterload, increase cardiac output, and appear to ameliorate autonomic nerve activity. However, the time course of autonomic nerve activity during these therapies remains unclear. We performed heart rate variability analysis using the MemCalc power spectral density method (MemCalc system; Suwa Trust Co, Tokyo) to assess autonomic nerve activity during adaptive servo-ventilation support and Waon therapy in two different cases and determined the time course of autonomic nerve activity during these therapies. During both therapies, we found a drastic increase in parasympathetic nerve activity and continuous suppression of sympathetic nerve activity. Heart rate variability analysis using the MemCalc method may be promising for the assessment of the efficacy of various treatments, including adaptive servo-ventilation support and Waon therapy, from the viewpoint of autonomic nerve activity. PMID:27385607

  11. The Raptor Real-Time Processing Architecture

    NASA Astrophysics Data System (ADS)

    Galassi, M.; Starr, D.; Wozniak, P.; Brozdin, K.

    The primary goal of Raptor is ambitious: to identify interesting optical transients from very wide field of view telescopes in real time, and then to quickly point the higher resolution Raptor ``fovea'' cameras and spectrometer to the location of the optical transient. The most interesting of Raptor's many applications is the real-time search for orphan optical counterparts of Gamma Ray Bursts. The sequence of steps (data acquisition, basic calibration, source extraction, astrometry, relative photometry, the smarts of transient identification and elimination of false positives, telescope pointing feedback, etc.) is implemented with a ``component'' approach. All basic elements of the pipeline functionality have been written from scratch or adapted (as in the case of SExtractor for source extraction) to form a consistent modern API operating on memory resident images and source lists. The result is a pipeline which meets our real-time requirements and which can easily operate as a monolithic or distributed processing system. Finally, the Raptor architecture is entirely based on free software (sometimes referred to as ``open source'' software). In this paper we also discuss the interplay between various free software technologies in this type of astronomical problem.

  12. Raptor -- Mining the Sky in Real Time

    NASA Astrophysics Data System (ADS)

    Galassi, M.; Borozdin, K.; Casperson, D.; McGowan, K.; Starr, D.; White, R.; Wozniak, P.; Wren, J.

    2004-06-01

    The primary goal of Raptor is ambitious: to identify interesting optical transients from very wide field of view telescopes in real time, and then to quickly point the higher resolution Raptor ``fovea'' cameras and spectrometer to the location of the optical transient. The most interesting of Raptor's many applications is the real-time search for orphan optical counterparts of Gamma Ray Bursts. The sequence of steps (data acquisition, basic calibration, source extraction, astrometry, relative photometry, the smarts of transient identification and elimination of false positives, telescope pointing feedback...) is implemented with a ``component'' aproach. All basic elements of the pipeline functionality have been written from scratch or adapted (as in the case of SExtractor for source extraction) to form a consistent modern API operating on memory resident images and source lists. The result is a pipeline which meets our real-time requirements and which can easily operate as a monolithic or distributed processing system. Finally: the Raptor architecture is entirely based on free software (sometimes referred to as "open source" software). In this paper we also discuss the interplay between various free software technologies in this type of astronomical problem.

  13. Toward a real time multi-tissue Adaptive Physics-Based Non-Rigid Registration framework for brain tumor resection

    PubMed Central

    Drakopoulos, Fotis; Foteinos, Panagiotis; Liu, Yixun; Chrisochoides, Nikos P.

    2013-01-01

    This paper presents an adaptive non-rigid registration method for aligning pre-operative MRI with intra-operative MRI (iMRI) to compensate for brain deformation during brain tumor resection. This method extends a successful existing Physics-Based Non-Rigid Registration (PBNRR) technique implemented in ITKv4.5. The new method relies on a parallel adaptive heterogeneous biomechanical Finite Element (FE) model for tissue/tumor removal depicted in the iMRI. In contrast the existing PBNRR in ITK relies on homogeneous static FE model designed for brain shift only (i.e., it is not designed to handle brain tumor resection). As a result, the new method (1) accurately captures the intra-operative deformations associated with the tissue removal due to tumor resection and (2) reduces the end-to-end execution time to within the time constraints imposed by the neurosurgical procedure. The evaluation of the new method is based on 14 clinical cases with: (i) brain shift only (seven cases), (ii) partial tumor resection (two cases), and (iii) complete tumor resection (five cases). The new adaptive method can reduce the alignment error up to seven and five times compared to a rigid and ITK's PBNRR registration methods, respectively. On average, the alignment error of the new method is reduced by 9.23 and 5.63 mm compared to the alignment error from the rigid and PBNRR method implemented in ITK. Moreover, the total execution time for all the case studies is about 1 min or less in a Linux Dell workstation with 12 Intel Xeon 3.47 GHz CPU cores and 96 GB of RAM. PMID:24596553

  14. Toward a real time multi-tissue Adaptive Physics-Based Non-Rigid Registration framework for brain tumor resection.

    PubMed

    Drakopoulos, Fotis; Foteinos, Panagiotis; Liu, Yixun; Chrisochoides, Nikos P

    2014-01-01

    This paper presents an adaptive non-rigid registration method for aligning pre-operative MRI with intra-operative MRI (iMRI) to compensate for brain deformation during brain tumor resection. This method extends a successful existing Physics-Based Non-Rigid Registration (PBNRR) technique implemented in ITKv4.5. The new method relies on a parallel adaptive heterogeneous biomechanical Finite Element (FE) model for tissue/tumor removal depicted in the iMRI. In contrast the existing PBNRR in ITK relies on homogeneous static FE model designed for brain shift only (i.e., it is not designed to handle brain tumor resection). As a result, the new method (1) accurately captures the intra-operative deformations associated with the tissue removal due to tumor resection and (2) reduces the end-to-end execution time to within the time constraints imposed by the neurosurgical procedure. The evaluation of the new method is based on 14 clinical cases with: (i) brain shift only (seven cases), (ii) partial tumor resection (two cases), and (iii) complete tumor resection (five cases). The new adaptive method can reduce the alignment error up to seven and five times compared to a rigid and ITK's PBNRR registration methods, respectively. On average, the alignment error of the new method is reduced by 9.23 and 5.63 mm compared to the alignment error from the rigid and PBNRR method implemented in ITK. Moreover, the total execution time for all the case studies is about 1 min or less in a Linux Dell workstation with 12 Intel Xeon 3.47 GHz CPU cores and 96 GB of RAM. PMID:24596553

  15. Identification of Hot Moments and Hot Spots for Real-Time Adaptive Control of Multi-scale Environmental Sensor Networks

    NASA Astrophysics Data System (ADS)

    Wietsma, T.; Minsker, B. S.

    2012-12-01

    Increased sensor throughput combined with decreasing hardware costs has led to a disruptive growth in data volume. This disruption, popularly termed "the data deluge," has placed new demands for cyberinfrastructure and information technology skills among researchers in many academic fields, including the environmental sciences. Adaptive sampling has been well established as an effective means of improving network resource efficiency (energy, bandwidth) without sacrificing sample set quality relative to traditional uniform sampling. However, using adaptive sampling for the explicit purpose of improving resolution over events -- situations displaying intermittent dynamics and unique hydrogeological signatures -- is relatively new. In this paper, we define hot spots and hot moments in terms of sensor signal activity as measured through discrete Fourier analysis. Following this frequency-based approach, we apply the Nyquist-Shannon sampling theorem, a fundamental contribution from signal processing that led to the field of information theory, for analysis of uni- and multivariate environmental signal data. In the scope of multi-scale environmental sensor networks, we present several sampling control algorithms, derived from the Nyquist-Shannon theorem, that operate at local (field sensor), regional (base station for aggregation of field sensor data), and global (Cloud-based, computationally intensive models) scales. Evaluated over soil moisture data, results indicate significantly greater sample density during precipitation events while reducing overall sample volume. Using these algorithms as indicators rather than control mechanisms, we also discuss opportunities for spatio-temporal modeling as a tool for planning/modifying sensor network deployments. Locally adaptive model based on Nyquist-Shannon sampling theorem Pareto frontiers for local, regional, and global models relative to uniform sampling. Objectives are (1) overall sampling efficiency and (2) sampling

  16. Advanced Adaptive Optics Technology Development

    SciTech Connect

    Olivier, S

    2001-09-18

    The NSF Center for Adaptive Optics (CfAO) is supporting research on advanced adaptive optics technologies. CfAO research activities include development and characterization of micro-electro-mechanical systems (MEMS) deformable mirror (DM) technology, as well as development and characterization of high-resolution adaptive optics systems using liquid crystal (LC) spatial light modulator (SLM) technology. This paper presents an overview of the CfAO advanced adaptive optics technology development activities including current status and future plans.

  17. Adaptive optics ophthalmoscopy

    PubMed Central

    Roorda, Austin; Duncan, Jacque L.

    2016-01-01

    This review starts with a brief history and description of adaptive optics (AO) technology, followed by a showcase of the latest capabilities of AO systems for imaging the human retina and an extensive review of the literature on where AO is being used clinically. The review concludes with a discussion on future directions and guidance on usage and interpretation of images from AO systems for the eye. PMID:26973867

  18. In-vivo, real-time cross-sectional images of retina using a GPU enhanced master slave optical coherence tomography system

    NASA Astrophysics Data System (ADS)

    Bradu, Adrian; Kapinchev, Konstantin; Barnes, Frederick; Podoleanu, Adrian

    2016-03-01

    In our previous reports we demonstrated a novel Fourier domain optical coherence tomography method, Master Slave optical coherence tomography (MS-OCT), that does not require resampling of data and can deliver en-face images from several depths simultaneously. While ideally suited for delivering information from a selected depth, the MS-OCT has been so far inferior to the conventional FFT based OCT in terms of time of producing cross section images. Here, we demonstrate that by taking advantage of the parallel processing capabilities offered by the MS-OCT method, cross-sectional OCT images of the human retina can be produced in real-time by assembling several T-scans from different depths. We analyze the conditions that ensure a real-time B-scan imaging operation, and demonstrate in-vivo real-time images from human fovea and the optic nerve, of comparable resolution and sensitivity to those produced using the traditional Fourier domain based method.

  19. Optics based signal processing methods for intraoperative blood vessel detection and quantification in real time (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Chaturvedi, Amal; Shukair, Shetha A.; Le Rolland, Paul; Vijayvergia, Mayank; Subramanian, Hariharan; Gunn, Jonathan W.

    2016-03-01

    Minimally invasive operations require surgeons to make difficult cuts to blood vessels and other tissues with impaired tactile and visual feedback. This leads to inadvertent cuts to blood vessels hidden beneath tissue, causing serious health risks to patients and a non-reimbursable financial burden to hospitals. Intraoperative imaging technologies have been developed, but these expensive systems can be cumbersome and provide only a high-level view of blood vessel networks. In this research, we propose a lean reflectance-based system, comprised of a dual wavelength LED, photodiode, and novel signal processing algorithms for rapid vessel characterization. Since this system takes advantage of the inherent pulsatile light absorption characteristics of blood vessels, no contrast agent is required for its ability to detect the presence of a blood vessel buried deep inside any tissue type (up to a cm) in real time. Once a vessel is detected, the system is able to estimate the distance of the vessel from the probe and the diameter size of the vessel (with a resolution of ~2mm), as well as delineate the type of tissue surrounding the vessel. The system is low-cost, functions in real-time, and could be mounted on already existing surgical tools, such as Kittner dissectors or laparoscopic suction irrigation cannulae. Having been successfully validated ex vivo, this technology will next be tested in a live porcine study and eventually in clinical trials.

  20. Real-Time Very Large-Scale Integration Recognition System with an On-Chip Adaptive K-Means Learning Algorithm

    NASA Astrophysics Data System (ADS)

    Hou, Zuoxun; Ma, Yitao; Zhu, Hongbo; Zheng, Nanning; Shibata, Tadashi

    2013-04-01

    A very large-scale integration (VLSI) recognition system equipped with an on-chip learning capability has been developed for real-time processing applications. This system can work in two functional modes of operation: adaptive K-means learning mode and recognition mode. In the adaptive K-means learning mode, the variance ratio criterion (VRC) has been employed to evaluate the quality of K-means classification results, and the evaluation algorithm has been implemented on the chip. As a result, it has become possible for the system to autonomously determine the optimum number of clusters (K). In the recognition mode, the nearest-neighbor search algorithm is very efficiently carried out by the fully parallel architecture employed in the chip. In both modes of operation, many hardware resources are shared and the functionality is flexibly altered by the system controller designed as a finite-state machine (FSM). The chip is implemented on Altera Cyclone II FPGA with 46K logic cells. Its operating clock is 25 MHz and the processing times for adaptive learning and recognition with 256 64-dimension feature vectors are about 0.42 ms and 4 µs, respectively. Both adaptive K-means learning and recognition functions have been verified by experiments using the image data from the COIL-100 (Columbia University Object Image Library) database.

  1. On the possibility of producing true real-time retinal cross-sectional images using a graphics processing unit enhanced master-slave optical coherence tomography system

    NASA Astrophysics Data System (ADS)

    Bradu, Adrian; Kapinchev, Konstantin; Barnes, Frederick; Podoleanu, Adrian

    2015-07-01

    In a previous report, we demonstrated master-slave optical coherence tomography (MS-OCT), an OCT method that does not need resampling of data and can be used to deliver en face images from several depths simultaneously. In a separate report, we have also demonstrated MS-OCT's capability of producing cross-sectional images of a quality similar to those provided by the traditional Fourier domain (FD) OCT technique, but at a much slower rate. Here, we demonstrate that by taking advantage of the parallel processing capabilities offered by the MS-OCT method, cross-sectional OCT images of the human retina can be produced in real time. We analyze the conditions that ensure a true real-time B-scan imaging operation and demonstrate in vivo real-time images from human fovea and the optic nerve, with resolution and sensitivity comparable to those produced using the traditional FD-based method, however, without the need of data resampling.

  2. On the possibility of producing true real-time retinal cross-sectional images using a graphics processing unit enhanced master-slave optical coherence tomography system.

    PubMed

    Bradu, Adrian; Kapinchev, Konstantin; Barnes, Frederick; Podoleanu, Adrian

    2015-07-01

    In a previous report, we demonstrated master-slave optical coherence tomography (MS-OCT), an OCT method that does not need resampling of data and can be used to deliver en face images from several depths simultaneously. In a separate report, we have also demonstrated MS-OCT's capability of producing cross-sectional images of a quality similar to those provided by the traditional Fourier domain (FD) OCT technique, but at a much slower rate. Here, we demonstrate that by taking advantage of the parallel processing capabilities offered by the MS-OCT method, cross-sectional OCT images of the human retina can be produced in real time. We analyze the conditions that ensure a true real-time B-scan imaging operation and demonstrate in vivo real-time images from human fovea and the optic nerve, with resolution and sensitivity comparable to those produced using the traditional FD-based method, however, without the need of data resampling. PMID:26198418

  3. Atmospheric and adaptive optics

    NASA Astrophysics Data System (ADS)

    Hickson, Paul

    2014-11-01

    Atmospheric optics is the study of optical effects induced by the atmosphere on light propagating from distant sources. Of particular concern to astronomers is atmospheric turbulence, which limits the performance of ground-based telescopes. The past two decades have seen remarkable growth in the capabilities and performance of adaptive optics (AO) systems. These opto-mechanical systems actively compensate for the blurring effect of the Earth's turbulent atmosphere. By sensing, and correcting, wavefront distortion introduced by atmospheric index-of-refraction variations, AO systems can produce images with resolution approaching the diffraction limit of the telescope at near-infrared wavelengths. This review highlights the physical processes and fundamental relations of atmospheric optics that are most relevant to astronomy, and discusses the techniques used to characterize atmospheric turbulence. The fundamentals of AO are then introduced and the many types of advanced AO systems that have been developed are described. The principles of each are outlined, and the performance and limitations are examined. Aspects of photometric and astrometric measurements of AO-corrected images are considered. The paper concludes with a discussion of some of the challenges related to current and future AO systems, particularly those that will equip the next generation of large, ground-based optical and infrared telescopes.

  4. Real-time monitoring of cardiac radio-frequency ablation lesion formation using an optical coherence tomography forward-imaging catheter

    PubMed Central

    Fleming, Christine P.; Wang, Hui; Quan, Kara J.; Rollins, Andrew M.

    2010-01-01

    Radio-frequency ablation (rfa) is the standard of care for the treatment of cardiac arrhythmias; however, there are no direct measures of the successful delivery of ablation lesions. Optical coherence tomography (OCT) imaging has the potential to provide real-time monitoring of cardiac rfa therapy, visualizing lesion formation and assessing tissue contact in the presence of blood. A rfa-compatible forward-imaging conical scanning probe is prototyped to meet this need. The forward-imaging probe provides circular scanning, with a 2-mm scan diameter and 30-μm spot size. During the application of rf energy, dynamics are recorded at 20 frames per second with a 40-kHz A-line rate. Real-time monitoring of cardiac rfa lesion formation and imaging in the presence of blood is demonstrated ex vivo in a swine left ventricle with a forward, flexible, circular scanning OCT catheter. PMID:20614999

  5. Generation and transmission of 85.4 Gb/s real-time 16QAM coherent optical OFDM signals over 400 km SSMF with preamble-less reception.

    PubMed

    Bouziane, Rachid; Schmogrow, Rene; Hillerkuss, D; Milder, P A; Koos, C; Freude, W; Leuthold, J; Bayvel, P; Killey, R I

    2012-09-10

    This paper presents a real-time, coherent optical OFDM transmitter based on a field programmable gate array implementation. The transmitter uses 16QAM mapping and runs at 28 GSa/s achieving a data rate of 85.4 Gb/s on a single polarization. A cyclic prefix of 25% of the symbol duration is added enabling dispersion-tolerant transmission over up to 400 km of SSMF. This is the first transmission experiment performed with a real-time OFDM transmitter running at data rates higher than 40 Gb/s. A key aspect of the paper is the introduction of a novel method for OFDM symbol synchronization without relying on training symbols. Unlike conventional preamble-based synchronization methods which perform cross-correlations at regular time intervals and let the system run freely in between, the proposed method performs synchronization in a continuous manner ensuring correct symbol alignment at all times. PMID:23037279

  6. Gait adaptation to visual kinematic perturbations using a real-time closed-loop brain–computer interface to a virtual reality avatar

    NASA Astrophysics Data System (ADS)

    Phat Luu, Trieu; He, Yongtian; Brown, Samuel; Nakagame, Sho; Contreras-Vidal, Jose L.

    2016-06-01

    Objective. The control of human bipedal locomotion is of great interest to the field of lower-body brain–computer interfaces (BCIs) for gait rehabilitation. While the feasibility of closed-loop BCI systems for the control of a lower body exoskeleton has been recently shown, multi-day closed-loop neural decoding of human gait in a BCI virtual reality (BCI-VR) environment has yet to be demonstrated. BCI-VR systems provide valuable alternatives for movement rehabilitation when wearable robots are not desirable due to medical conditions, cost, accessibility, usability, or patient preferences. Approach. In this study, we propose a real-time closed-loop BCI that decodes lower limb joint angles from scalp electroencephalography (EEG) during treadmill walking to control a walking avatar in a virtual environment. Fluctuations in the amplitude of slow cortical potentials of EEG in the delta band (0.1–3 Hz) were used for prediction; thus, the EEG features correspond to time-domain amplitude modulated potentials in the delta band. Virtual kinematic perturbations resulting in asymmetric walking gait patterns of the avatar were also introduced to investigate gait adaptation using the closed-loop BCI-VR system over a period of eight days. Main results. Our results demonstrate the feasibility of using a closed-loop BCI to learn to control a walking avatar under normal and altered visuomotor perturbations, which involved cortical adaptations. The average decoding accuracies (Pearson’s r values) in real-time BCI across all subjects increased from (Hip: 0.18 ± 0.31 Knee: 0.23 ± 0.33 Ankle: 0.14 ± 0.22) on Day 1 to (Hip: 0.40 ± 0.24 Knee: 0.55 ± 0.20 Ankle: 0.29 ± 0.22) on Day 8. Significance. These findings have implications for the development of a real-time closed-loop EEG-based BCI-VR system for gait rehabilitation after stroke and for understanding cortical plasticity induced by a closed-loop BCI-VR system.

  7. Record-high and robust 17.125 Gb/s gross-rate over 25 km SSMF transmissions of real-time dual-band optical OFDM signals directly modulated by 1 GHz RSOAs.

    PubMed

    Zhang, Q W; Hugues-Salas, E; Ling, Y; Zhang, H B; Giddings, R P; Zhang, J J; Wang, M; Tang, J M

    2014-03-24

    Aggregated 17.125 Gb/s real-time end-to-end dual-band optical OFDM (OOFDM) transmissions over 25 km SSMF IMDD systems with 7 dB receiver sensitivity improvements are experimentally demonstrated, for the first time, by utilizing low-cost transceiver components such as directly modulated 1GHz RSOAs and DACs/ADCs operating at sampling speeds as low as 4GS/s. The demonstrated OOFDM transceivers have both strong adaptability and sufficiently large passband carrier frequency tunability, which enable full use of highly dynamic spectral characteristics of the transmission systems. This results in the achievements of not only excellent performance robustness to variations in system operating conditions but also significantly relaxed requirements on RSOA small-signal modulation bandwidth. It is shown that the aforementioned transmission capacity only varies by <23% over a RSOA-injected optical power variation range as large as 20dB, and that the 1 GHz RSOAs can support successful transmissions of adaptively modulated OOFDM signals having bandwidths of 8.5 GHz. By taking into account the adopted 25% cyclic prefix and a typical 7.3% FEC overhead, the demonstrated real-time OOFDM transmission systems are capable of conveying 11.6 Gb/s user data. PMID:24663982

  8. Adaptive Optical Scanning Holography

    PubMed Central

    Tsang, P. W. M.; Poon, Ting-Chung; Liu, J.-P.

    2016-01-01

    Optical Scanning Holography (OSH) is a powerful technique that employs a single-pixel sensor and a row-by-row scanning mechanism to capture the hologram of a wide-view, three-dimensional object. However, the time required to acquire a hologram with OSH is rather lengthy. In this paper, we propose an enhanced framework, which is referred to as Adaptive OSH (AOSH), to shorten the holographic recording process. We have demonstrated that the AOSH method is capable of decreasing the acquisition time by up to an order of magnitude, while preserving the content of the hologram favorably. PMID:26916866

  9. Adaptive Optical Scanning Holography.

    PubMed

    Tsang, P W M; Poon, Ting-Chung; Liu, J-P

    2016-01-01

    Optical Scanning Holography (OSH) is a powerful technique that employs a single-pixel sensor and a row-by-row scanning mechanism to capture the hologram of a wide-view, three-dimensional object. However, the time required to acquire a hologram with OSH is rather lengthy. In this paper, we propose an enhanced framework, which is referred to as Adaptive OSH (AOSH), to shorten the holographic recording process. We have demonstrated that the AOSH method is capable of decreasing the acquisition time by up to an order of magnitude, while preserving the content of the hologram favorably. PMID:26916866

  10. New Adaptive Optics Technique Demonstrated

    NASA Astrophysics Data System (ADS)

    2007-03-01

    First ever Multi-Conjugate Adaptive Optics at the VLT Achieves First Light On the evening of 25 March 2007, the Multi-Conjugate Adaptive Optics Demonstrator (MAD) achieved First Light at the Visitor Focus of Melipal, the third Unit Telescope of the Very Large Telescope (VLT). MAD allowed the scientists to obtain images corrected for the blurring effect of atmospheric turbulence over the full 2x2 arcminute field of view. This world premiere shows the promises of a crucial technology for Extremely Large Telescopes. ESO PR Photo 19a/07 ESO PR Photo 19a/07 The MCAO Demonstrator Telescopes on the ground suffer from the blurring effect induced by atmospheric turbulence. This turbulence causes the stars to twinkle in a way which delights the poets but frustrates the astronomers, since it blurs the fine details of the images. However, with Adaptive Optics (AO) techniques, this major drawback can be overcome so that the telescope produces images that are as sharp as theoretically possible, i.e., approaching space conditions. Adaptive Optics systems work by means of a computer-controlled deformable mirror (DM) that counteracts the image distortion induced by atmospheric turbulence. It is based on real-time optical corrections computed from image data obtained by a 'wavefront sensor' (a special camera) at very high speed, many hundreds of times each second. The concept is not new. Already in 1989, the first Adaptive Optics system ever built for Astronomy (aptly named "COME-ON") was installed on the 3.6-m telescope at the ESO La Silla Observatory, as the early fruit of a highly successful continuing collaboration between ESO and French research institutes (ONERA and Observatoire de Paris). Ten years ago, ESO initiated an Adaptive Optics program to serve the needs for its frontline VLT project. Today, the Paranal Observatory is without any doubt one of the most advanced of its kind with respect to AO with no less than 7 systems currently installed (NACO, SINFONI, CRIRES and

  11. Adaptive optics with pupil tracking for high resolution retinal imaging

    PubMed Central

    Sahin, Betul; Lamory, Barbara; Levecq, Xavier; Harms, Fabrice; Dainty, Chris

    2012-01-01

    Adaptive optics, when integrated into retinal imaging systems, compensates for rapidly changing ocular aberrations in real time and results in improved high resolution images that reveal the photoreceptor mosaic. Imaging the retina at high resolution has numerous potential medical applications, and yet for the development of commercial products that can be used in the clinic, the complexity and high cost of the present research systems have to be addressed. We present a new method to control the deformable mirror in real time based on pupil tracking measurements which uses the default camera for the alignment of the eye in the retinal imaging system and requires no extra cost or hardware. We also present the first experiments done with a compact adaptive optics flood illumination fundus camera where it was possible to compensate for the higher order aberrations of a moving model eye and in vivo in real time based on pupil tracking measurements, without the real time contribution of a wavefront sensor. As an outcome of this research, we showed that pupil tracking can be effectively used as a low cost and practical adaptive optics tool for high resolution retinal imaging because eye movements constitute an important part of the ocular wavefront dynamics. PMID:22312577

  12. Real-time Molecular Study of Bystander Effects of Low dose Low LET radiation Using Living Cell Imaging and Nanoparticale Optics

    SciTech Connect

    Natarajan, Mohan; Xu, Nancy R; Mohan, Sumathy

    2013-06-03

    cGy on coverslips will be examined for (a) low LET radiation-induced alterations of cellular function and its physiological relevance in real time; and (b) radiation damage triggered bystander effect on the neighboring unirradiated cells. First, to determine the low LET radiation induced alteration of cellular function we will examine: (i) the real time transformation of single membrane transporters in single living cells; (ii) the pump efficiency of membrane efflux pump of live cells in real time at the molecular level; (iii) the kinetics of single-ligand receptor interaction on single live cell surface (Figure C); and (iv) alteration in chromosome replication in living cell. Second, to study the radiation triggered bystander responses, we will examine one of the key signaling pathway i.e. TNF- alpha/NF-kappa B mediated signaling. TNF-alpha specific nano particle sensors (green) will be developed to detect the releasing dynamics, transport mechanisms and ligand-receptor binding on live cell surface in real time. A second sensor (blue) will be developed to simultaneously monitor the track of NF-kB inside the cell. The proposed nano-particle optics approach would complement our DOE funded study on biochemical mechanisms of TNF-alpha- NF-kappa B-mediated bystander effect.

  13. Real-time GPU-accelerated processing and volumetric display for wide-field laser-scanning optical-resolution photoacoustic microscopy.

    PubMed

    Kang, Heesung; Lee, Sang-Won; Lee, Eun-Soo; Kim, Se-Hwa; Lee, Tae Geol

    2015-12-01

    Fast signal processing and real-time displays are essential for practical imaging modality in various fields of applications. However, the imaging speed in optical-resolution photoacoustic microscopy (OR-PAM), in particular, depends on factors such as the pulse repetition rate of the laser, scanning method, field of view (FOV), and signal processing time. In the past, efforts to increase acquisition speed either focused on developing new scanning methods or using lasers with higher pulse repetition rates. However, high-speed signal processing is also important for real-time volumetric display in OR-PAM. In this study, we carried out parallel signal processing using a graphics processing unit (GPU) to enable fast signal processing and wide-field real-time displays in laser-scanning OR-PAM. The average total GPU processing time for a B-mode PAM image was approximately 1.35 ms at a display speed of 480 fps when the data samples were acquired with 736 (axial) × 500 (lateral) points/B-mode-frame at a pulse repetition rate of 300 kHz. In addition, we successfully displayed maximum amplitude projection images of a mouse's ear as volumetric images with an FOV of 3 mm × 3 mm (500 × 500 pixels) at 1.02 s, corresponding to 0.98 fps. PMID:26713184

  14. Transvaginal photoacoustic imaging probe and system based on a multiport fiber-optic beamsplitter and a real time imager for ovarian cancer detection

    NASA Astrophysics Data System (ADS)

    Kumavor, Patrick D.; Alqasemi, Umar; Tavakoli, Behnoosh; Li, Hai; Yang, Yi; Zhu, Quing

    2013-03-01

    This paper presents a real-time transvaginal photoacoustic imaging probe for imaging human ovaries in vivo. The probe consists of a high-throughput (up to 80%) fiber-optic 1 x 19 beamsplitters, a commercial array ultrasound transducer, and a fiber protective sheath. The beamsplitter has a 940-micron core diameter input fiber and 240-micron core diameter output fibers numbering 36. The 36 small-core output fibers surround the ultrasound transducer and delivers light to the tissue during imaging. A protective sheath, modeled in the form of the transducer using a 3-D printer, encloses the transducer with array of fibers. A real-time image acquisition system collects and processes the photoacoustic RF signals from the transducer, and displays the images formed on a monitor in real time. Additionally, the system is capable of coregistered pulse-echo ultrasound imaging. In this way, we obtain both morphological and functional information from the ovarian tissue. Photoacousitc images of malignant human ovaries taken ex vivo with the probe revealed blood vascular and networks that was distinguishable from normal ovaries, making the probe potential useful for characterizing ovarian tissue.

  15. Real-time GPU-accelerated processing and volumetric display for wide-field laser-scanning optical-resolution photoacoustic microscopy

    PubMed Central

    Kang, Heesung; Lee, Sang-Won; Lee, Eun-Soo; Kim, Se-Hwa; Lee, Tae Geol

    2015-01-01

    Fast signal processing and real-time displays are essential for practical imaging modality in various fields of applications. However, the imaging speed in optical-resolution photoacoustic microscopy (OR-PAM), in particular, depends on factors such as the pulse repetition rate of the laser, scanning method, field of view (FOV), and signal processing time. In the past, efforts to increase acquisition speed either focused on developing new scanning methods or using lasers with higher pulse repetition rates. However, high-speed signal processing is also important for real-time volumetric display in OR-PAM. In this study, we carried out parallel signal processing using a graphics processing unit (GPU) to enable fast signal processing and wide-field real-time displays in laser-scanning OR-PAM. The average total GPU processing time for a B-mode PAM image was approximately 1.35 ms at a display speed of 480 fps when the data samples were acquired with 736 (axial) × 500 (lateral) points/B-mode-frame at a pulse repetition rate of 300 kHz. In addition, we successfully displayed maximum amplitude projection images of a mouse’s ear as volumetric images with an FOV of 3 mm × 3 mm (500 × 500 pixels) at 1.02 s, corresponding to 0.98 fps. PMID:26713184

  16. Optical monitor for real time thickness change measurements via lateral-translation induced phase-stepping interferometry

    DOEpatents

    Rushford, Michael C.

    2002-01-01

    An optical monitoring instrument monitors etch depth and etch rate for controlling a wet-etching process. The instrument provides means for viewing through the back side of a thick optic onto a nearly index-matched interface. Optical baffling and the application of a photoresist mask minimize spurious reflections to allow for monitoring with extremely weak signals. A Wollaston prism enables linear translation for phase stepping.

  17. Real-time optical recording of beta1-adrenergic receptor activation reveals supersensitivity of the Arg389 variant to carvedilol.

    PubMed

    Rochais, Francesca; Vilardaga, Jean-Pierre; Nikolaev, Viacheslav O; Bünemann, Moritz; Lohse, Martin J; Engelhardt, Stefan

    2007-01-01

    Antagonists of beta-adrenergic receptors (beta-ARs) have become a main therapeutic regimen for the treatment of heart failure even though the mechanisms of their beneficial effects are still poorly understood. Here, we used fluorescent resonance energy transfer-based (FRET-based) approaches to directly monitor activation of the beta(1)-AR and downstream signaling. While the commonly used beta-AR antagonists metoprolol, bisoprolol, and carvedilol displayed varying degrees of inverse agonism on the Gly389 variant of the receptor (i.e., actively switching off the beta(1)-AR), surprisingly, only carvedilol showed very specific and marked inverse agonist effects on the more frequent Arg389 variant. These specific effects of carvedilol on the Arg389 variant of the beta(1)-AR were also seen for control of beating frequency in rat cardiac myocytes expressing the 2 receptor variants. This FRET sensor permitted direct observation of activation of the beta(1)-AR in living cells in real time. It revealed that beta(1)-AR variants dramatically differ in their responses to diverse beta blockers, with possible consequences for their clinical use. PMID:17200720

  18. Real-time optical monitoring of thin film growth by in situ pyrometry through multiple layers and effective media approximation modeling

    SciTech Connect

    Benedic, F.; Bruno, P.; Pigeat, Ph.

    2007-03-26

    A model combining multiple layer description and effective media approximation is developed for pyrometry in the case of thin film synthesis, in order to estimate the film property evolution along its thickness during the growth process in real time. The model is used to investigate optical properties of polycrystalline diamond film prepared by H{sub 2}/CH{sub 4}/N{sub 2} microwave plasma. It is shown that in the presence of nitrogen, the growth is strongly nonhomogeneous. The deposit, initially composed of large amounts of void and nondiamond phases, evolves rapidly towards highest quality dense film where the diamond phase is predominant.

  19. Real-time simultaneous single snapshot of optical properties and blood flow using coherent spatial frequency domain imaging (cSFDI).

    PubMed

    Ghijsen, Michael; Choi, Bernard; Durkin, Anthony J; Gioux, Sylvain; Tromberg, Bruce J

    2016-03-01

    In this work we present and validate a wide-field method for the real-time mapping of tissue absorption, scattering and blood flow properties over wide regions of tissue (15 cm x 15 cm) with high temporal resolution (50 frames per second). We achieve this by applying Fourier Domain demodulation techniques to coherent spatial frequency domain imaging to extract optical properties and speckle flow index from a single snapshot. Applying this technique to forearm reactive hyperemia protocols demonstrates the ability to resolve intrinsic physiological signals such as the heart beat waveform and the buildup of deoxyhemoglobin associated with oxygen consumption. PMID:27231595

  20. Real-time simultaneous single snapshot of optical properties and blood flow using coherent spatial frequency domain imaging (cSFDI)

    PubMed Central

    Ghijsen, Michael; Choi, Bernard; Durkin, Anthony J.; Gioux, Sylvain; Tromberg, Bruce J.

    2016-01-01

    In this work we present and validate a wide-field method for the real-time mapping of tissue absorption, scattering and blood flow properties over wide regions of tissue (15 cm x 15 cm) with high temporal resolution (50 frames per second). We achieve this by applying Fourier Domain demodulation techniques to coherent spatial frequency domain imaging to extract optical properties and speckle flow index from a single snapshot. Applying this technique to forearm reactive hyperemia protocols demonstrates the ability to resolve intrinsic physiological signals such as the heart beat waveform and the buildup of deoxyhemoglobin associated with oxygen consumption. PMID:27231595

  1. Novel optical oxy/deoxy hemoglobin monitoring as a modality for non-invasive real-time monitoring of cognitive activity and beyond

    NASA Astrophysics Data System (ADS)

    Davies-Shaw, Dana; Huser, Thomas R.

    2008-02-01

    We report on the successful development of a custom in vitro system that provides a physiologically relevant means of demonstrating optical methodologies for the calibration and validation of oxygen delivery and hemoglobin oxygen binding dynamics in the brain. While measured optical signals have generally been equated to heme absorbance values that are, in turn, presumed to correspond to oxygen delivery, there has been little specific study of the sigmoidal oxygen binding dynamics of hemoglobin, a tetrameric protein, within physiologically relevant parameters. Our development of this novel analytical device addresses this issue, and is a significant step towards the minimally invasive and real-time monitoring of spatially resolved cognitive processes. As such, it is of particular interest for the detection of autistic brain activity in infants and young children. Moreover, our device and approach bring with them the ability to quantify and spatially resolve oxygen delivery down to volumes relevant to individual cell oxygen uptake, without any oxygen consumption, and with a temporal resolution that is physically unachievable by any oxygen tracking modality such as fMRI etc. Such a capability opens up myriad possibilities for further investigation, such as real-time tumor biopsy and resection; the tracking and quantification of cellular proliferation, as well as metabolic measures of tissue viability, to name but a few. Our system has also been engineered to be synergistic with virtually all imaging techniques, optical and otherwise.

  2. A low-cost, portable optical sensing system with wireless communication compatible of real-time and remote detection of dissolved ammonia

    NASA Astrophysics Data System (ADS)

    Deng, Shijie; Doherty, William; McAuliffe, Michael AP; Salaj-Kosla, Urszula; Lewis, Liam; Huyet, Guillaume

    2016-06-01

    A low-cost and portable optical chemical sensor based ammonia sensing system that is capable of detecting dissolved ammonia up to 5 ppm is presented. In the system, an optical chemical sensor is designed and fabricated for sensing dissolved ammonia concentrations. The sensor uses eosin as the fluorescence dye which is immobilized on the glass substrate by a gas-permeable protection layer. A compact module is developed to hold the optical components, and a battery powered micro-controller system is designed to read out and process the data measured. The system operates without the requirement of laboratory instruments that makes it cost effective and highly portable. Moreover, the calculated results in the system can be transmitted to a PC wirelessly, which allows the remote and real-time monitoring of dissolved ammonia.

  3. Adaptive thresholding with inverted triangular area for real-time detection of the heart rate from photoplethysmogram traces on a smartphone.

    PubMed

    Jiang, Wen Jun; Wittek, Peter; Zhao, Li; Gao, Shi Chao

    2014-01-01

    Photoplethysmogram (PPG) signals acquired by smartphone cameras are weaker than those acquired by dedicated pulse oximeters. Furthermore, the signals have lower sampling rates, have notches in the waveform and are more severely affected by baseline drift, leading to specific morphological characteristics. This paper introduces a new feature, the inverted triangular area, to address these specific characteristics. The new feature enables real-time adaptive waveform detection using an algorithm of linear time complexity. It can also recognize notches in the waveform and it is inherently robust to baseline drift. An implementation of the algorithm on Android is available for free download. We collected data from 24 volunteers and compared our algorithm in peak detection with two competing algorithms designed for PPG signals, Incremental-Merge Segmentation (IMS) and Adaptive Thresholding (ADT). A sensitivity of 98.0% and a positive predictive value of 98.8% were obtained, which were 7.7% higher than the IMS algorithm in sensitivity, and 8.3% higher than the ADT algorithm in positive predictive value. The experimental results confirmed the applicability of the proposed method. PMID:25570674

  4. Real-time displacement measurement system using phase-shifted optical pulse interferometry: Application to a seismic observation system

    NASA Astrophysics Data System (ADS)

    Yoshida, Minoru; Hirayama, Yoshiharu; Takahara, Atsushi; Kashi, Motofumi; Takeuchi, Keiji; Ikeda, Toshiharu; Hirai, Fumio; Mizuno, Yosuke; Nakamura, Kentaro; Kimura, Hitoshi; Ino, Norio; Inoue, Wataru

    2016-02-01

    We developed a method of detecting incident light levels on the oscillator surfaces and light pulses that include two interfering pulses with a phase shift of π/2 (phase-shifted optical pulse interferometry). This system enables the measurement of displacements greatly exceeding the half wavelength of the laser. Moreover, it allows measurements at multiple locations with a single optical fiber for using optical pulses. In this study, we conducted an interference experiment using 30 ns optical pulses and transmitted them at 1 µs intervals. We confirmed that the above two measurements are possible. Furthermore, from the data of the oscillator used for verification, we showed that measurements on the order of nanometers are possible. Since this method does not require a power supply to the oscillator, its widespread applications in physical exploration can be expected.

  5. Tissue distribution and real-time fluorescence measurement of a tumor-targeted nanodevice by a two photon optical fiber fluorescence probe

    NASA Astrophysics Data System (ADS)

    Thomas, Thommey P.; Ye, Jing Yong; Yang, Chu-Sheng; Myaing, Monthiri; Majoros, Istvan J.; Kotlyar, Alina; Cao, Zhengyi; Norris, Theodore B.; Baker, James R., Jr.

    2006-02-01

    Real-time fluorescence measurement in deep tumors in live animals (or humans) by conventional methods has significant challenges. We have developed a two-photon optical fiber fluorescence (TPOFF) probe as a minimally invasive technique for quantifying fluorescence in solid tumors in live mice. Here we demonstrate TPOFF for real-time measurements of targeted drug delivery dynamics to tumors in live mice. 50-femtosecond laser pulses at 800 nm were coupled into a single mode optical fiber and delivered into the tumor through a 27-gauge needle. Fluorescence was collected back through the same fiber, filtered, and detected with photon counting. Biocompatible dendrimer-based nanoparticles were used for targeted delivery of fluorescent materials into tumors. Dendrimers with targeting agent folic acid and fluorescent reporter 6-TAMRA (G5-6T-FA) were synthesized. KB cell tumors expressing high levels of FA receptors were developed in SCID mice. We initially demonstrated the specific uptake of the targeted conjugates into tumor, kidney and liver, using the TPOFF probe. The tumor fluorescence was then taken in live mice at 30 min, 2 h and 24 h with the TPOFF probe. G5-6T-FA accumulated in the tumor with maximum mean levels reaching 673 +/- 67 nM at the 2 h time point. In contrast, the levels of a control, non-targeted conjugate (G5-6T) at 2 h reached a level of only 136 +/- 28 nM in tumors, and decrease quickly. This indicates that the TPOFF probe can be used as a minimally invasive detection system for quantifying the specific targeting of a fluorescent nanodevice on a real-time basis.

  6. Modulated FT- Raman Fiber-Optic Spectroscopy: A technique for Remotely Monitoring High-Temperature Reactions in Real-Time

    NASA Technical Reports Server (NTRS)

    Cooper, John B.; Wise, Kent L.; Jensen, Brian J.

    1997-01-01

    A modification to a commercial FT-Raman spectrometer is presented for the elimination of thermal backgrounds in FT-Raman spectra. The modification involves the use of a mechanical chopper to modulate the CW laser, remote collection of the signal via fiber optics, and connection of a dual-phase digital signal processor lock-in amplifier between the detector and the spectrometer's collection electronics to demodulate and filter the optical signals. The resulting modulated FT-Raman fiber-optic spectrometer is capable of completely eliminating thermal backgrounds at temperatures exceeding 370 C. In addition, the signal/noise of generated Raman spectra is greater than for spectra collected with the conventional FT-Raman under identical conditions and incident laser power. This is true for both room-temperature and hot samples. The method allows collection of data using preexisting spectrometer software. The total cost of the modification (excluding fiber optics) is approximately $3000 and requires less than 2 h to implement. This is the first report of Fr-Raman spectra collected at temperatures in excess of 300 C in the absence of thermal backgrounds.

  7. Real-time radiography

    SciTech Connect

    Bossi, R.H.; Oien, C.T.

    1981-02-26

    Real-time radiography is used for imaging both dynamic events and static objects. Fluorescent screens play an important role in converting radiation to light, which is then observed directly or intensified and detected. The radiographic parameters for real-time radiography are similar to conventional film radiography with special emphasis on statistics and magnification. Direct-viewing fluoroscopy uses the human eye as a detector of fluorescent screen light or the light from an intensifier. Remote-viewing systems replace the human observer with a television camera. The remote-viewing systems have many advantages over the direct-viewing conditions such as safety, image enhancement, and the capability to produce permanent records. This report reviews real-time imaging system parameters and components.

  8. Linking aerosol size and optical properties to trace gases emitted from biomass burning in real-time

    NASA Astrophysics Data System (ADS)

    McMeeking, G. R.; Carrico, C. M.; Stockwell, C.; Yokelson, R. J.; Veres, P. R.; DeMott, P. J.; Kreidenweis, S. M.

    2014-12-01

    Biomass burning aerosols have large impacts on regional and global climate that are partly determined by their optical properties. The optical properties of aerosol depend on their size and composition, which in turn are related to fire combustion processes. Here we investigate relationships between a large suite of trace gases and aerosol size and optical properties to better understand processes governing the optical properties of fresh biomass burning aerosol emissions. We examined over 100 individual burns of biomass fuels during the Fire Laboratory at Missoula Experiment 4 (FLAME 4). Emissions were measured directly from an exhaust stack designed to capture all emissions from relatively small-scale fires burned at the base of a large burn chamber. Trace gas species were measured using a combination of an open-path Fourier transform infrared spectrometer (OP-FTIR) and proton-transfer mass spectrometer (PTR-MS). Aerosol optical properties at 870 nm were measured using a photoacoustic extinctiometer (PAX) and particle size distributions were measured using a Fast Mobility Particle Sizer (FMPS) and Aerodynamic Particle Sizer. The rapid response of the instruments allowed for comparisons of the emissions and particle properties over the duration of the fire. For example, we observed correlations between aerosol absorption, particle size, and gas-phase species associated with different types of combustion such as flaming and smoldering. We also report fire-integrated emissions for aerosol absorption and scattering coefficients and compare these to other fire-integrated properties. Many of our burn experiments examined a number of fuels that had not before been characterized in laboratory conditions, including a number of peat fuels, African savanna grasses and crop residuals.

  9. Surface functionalization allowing repetitive use of optical sensors for real-time detection of antibody-bacteria interaction.

    PubMed

    Kutscher, Marika; Rosenberger, Manuel; Schmauss, Bernhard; Meinel, Lorenz; Lorenz, Udo; Ohlsen, Knut; Hellmann, Ralf; Germershaus, Oliver

    2016-07-01

    In this study, sensor surface functionalization allowing the repetitive use of a sensing device was evaluated for antibody-based detection of living bacteria using an optical planar Bragg grating sensor. To achieve regenerable immobilization of bacteria specific antibodies, the heterobifunctional cross-linker N-succinimidyl 3-(2-pyridyldithio) propionate (SPDP) was linked to an aminosilanized sensor surface and subsequently reduced to expose sulfhydryl groups enabling the covalent conjugation of SPDP-activated antibodies via disulfide bonds. The immobilization of a capture antibody specific for Staphylococcus aureus on the sensor surface as well as specific binding of S. aureus could be monitored, highlighting the applicability of optical sensors for the specific detection of large biological structures. Reusability of bacteria saturated sensors was successfully demonstrated by cleaving the antibody along with bound bacteria through reduction of disulfide bonds and subsequent re-functionalization with activated antibody, resulting in comparable sensitivity towards S. aureus. PMID:26486822

  10. Real-time optical correlator using computer-generated holographic filter on a liquid crystal light valve

    NASA Technical Reports Server (NTRS)

    Chao, Tien-Hsin; Yu, Jeffrey

    1990-01-01

    Limitations associated with the binary phase-only filter often used in optical correlators are presently circumvented in the writing of complex-valued data on a gray-scale spatial light modulator through the use of a computer-generated hologram (CGH) algorithm. The CGH encodes complex-valued data into nonnegative real CGH data in such a way that it may be encoded in any of the available gray-scale spatial light modulators. A CdS liquid-crystal light valve is used for the complex-valued CGH encoding; computer simulations and experimental results are compared, and the use of such a CGH filter as the synapse hologram in a holographic optical neural net is discussed.

  11. Real-time monitoring of tumor response to preoperative radiochemotherapy for rectal carcinoma by nonlinear optical microscopy

    NASA Astrophysics Data System (ADS)

    Li, Lianhuang; Chen, Zhifen; Wang, Xingfu; Jiang, Weizhong; Guan, Guoxian; Chen, Jianxin

    2015-03-01

    The continuing advancement of nonlinear optical imaging techniques has opened many new windows in biological exploration. In this work, the nonlinear optical microscopy, based on two-photon excited fluorescence (TPEF) and second harmonic generation (SHG), was extended to probe tumor response to preoperative radiochemotherapy (RCT) for rectal carcinoma. It was found that MPM has the ability of direct visualization of histopathologic changes in rectal carcinoma following preoperative RCT including stromal fibrosis, colloid response and residual tumors. Our results also showed the capability of MPM using the quantitative analyses of images to quantify these changes. This work may provide the groundwork for further exploration into the application of multiphoton-based endoscopy in a clinical setting.

  12. Self-contained diffuse optical imaging system for real-time detection and localization of vascular occlusions.

    PubMed

    Pollonini, Luca; Forseth, Kiefer J; Dacso, Clifford C; Parazynski, Scott E; Friedman, Jeffrey D

    2015-08-01

    Free flap surgery is a procedure where healthy tissue is transferred from a donor site to a recipient site of the body to fill a defect without maintaining the original blood supply to the flap. The anastomosis of the vascular network of the flap to the blood vessels adjacent to the recipient site has associated risks of arterial and/or venous occlusions that must be promptly detected to avoid temporary or permanent tissue damage. In this work, we present a skin-contact diffusion optical imaging (DOI) system able to continuously provide a three-dimensional representation of the flap oxygenation to promptly detect vascular occlusions potentially occurring in the flap. Multiple near-infrared LEDs and photodetectors were embedded into a self-contained optical sensor for prolonged monitoring of concentration changes of oxygenated (HbO) and deoxygenated hemoglobin (HbR) at multiple locations and depths. A time-efficient algorithm mapped measured oxygenation changes in a three-dimensional volume to allow surgeons and clinical personnel to detect and localize abnormal blood perfusion changes during or after surgery, in time for corrective intervention. The image reconstruction algorithm was validated using computerized flap models in which oxygenation was synthetically altered, whereas the optical system was preliminarily tested on a healthy forearm simulating a flap undergoing arterial and venous occlusions, proving the feasibility of implementing DOI in the form of a wearable patch for prolonged perfusion monitoring. PMID:26737630

  13. Optimal Throughput and Self-adaptability of Robust Real-Time IEEE 802.15.4 MAC for AMI Mesh Network

    NASA Astrophysics Data System (ADS)

    Shabani, Hikma; Mohamud Ahmed, Musse; Khan, Sheroz; Hameed, Shahab Ahmed; Hadi Habaebi, Mohamed

    2013-12-01

    A smart grid refers to a modernization of the electricity system that brings intelligence, reliability, efficiency and optimality to the power grid. To provide an automated and widely distributed energy delivery, the smart grid will be branded by a two-way flow of electricity and information system between energy suppliers and their customers. Thus, the smart grid is a power grid that integrates data communication networks which provide the collected and analysed data at all levels in real time. Therefore, the performance of communication systems is so vital for the success of smart grid. Merit to the ZigBee/IEEE802.15.4std low cost, low power, low data rate, short range, simplicity and free licensed spectrum that makes wireless sensor networks (WSNs) the most suitable wireless technology for smart grid applications. Unfortunately, almost all ZigBee channels overlap with wireless local area network (WLAN) channels, resulting in severe performance degradation due to interference. In order to improve the performance of communication systems, this paper proposes an optimal throughput and self-adaptability of ZigBee/IEEE802.15.4std for smart grid.

  14. Tubular optical waveguide-based particle plasmon resonance biosensor for label-free and real-time detection

    NASA Astrophysics Data System (ADS)

    Lin, Hsing-Ying; Huang, Chen-Han; Liu, Yu-Chia; Chen, Shin-Huei; Chau, Lai-Kwan

    2012-02-01

    A novel tubular optical waveguide-based particle plasmon resonance (TOW-PPR) device for chemical and biochemical sensing is presented. The sensor is based on intensity measurement of consecutive total internal reflections (TIRs) along the wall of the gold nanoparticles-modified glass vial at a fixed wavelength from a miniaturized light emitting diode (LED). The extinction cross-section of self-assembled gold nanoparticles on the inner wall surface of a tubular glass vial changes with different refractive indexes (RIs) of surroundings in the vicinity of nanoparticles. In comparison with other evanescent wave based optical sensors, the TOW-PPR sensor possesses merits of being a wavelength-selectable optical waveguide sensor to fit application needs, microchamber of a defined sample volume, and itself of being a mechanical support for sensor coatings. The sensor resolution is estimated to be 2.7x10-6 RIU in measuring solutions of various RIs ranging from 1.343 to 1.403 obtained by dissolving sucrose in ultrapure water with a concentration between 6.8% and 41.7%. Moreover, the TOW-PPR microchamber was chemically modified with N-(2,4-dinitrophenyl)-6-aminohexanoic acid (DNP, MW = 297.27 Da) and has been shown to be able to detect different concentration of anti-dinitrophenyl antibody (anti-DNP, MW = 220 kDa) in buffer solutions. From corresponding calibrations, a detection limit of 1.21x10-10 g/ml by DNP-functionalized TOW-PPR sensor chip for anti-DNP detection is demonstrated. The device can be simply and inexpensively fabricated, and therefore is ideally suitable for disposable plasmonic sensors, especially promising for high-throughput biochemical sensing applications.

  15. SU-E-J-127: Real-Time Dosimetric Assessment for Adaptive Head-And-Neck Treatment Via A GPU-Based Deformable Image Registration Framework

    SciTech Connect

    Qi, S; Neylon, J; Chen, A; Low, D; Kupelian, P; Steinberg, M; Santhanam, A

    2014-06-01

    Purposes: To systematically monitor anatomic variations and their dosimetric consequences during head-and-neck (H'N) radiation therapy using a GPU-based deformable image registration (DIR) framework. Methods: Eleven H'N IMRT patients comprised the subject population. The daily megavoltage CT and weekly kVCT scans were acquired for each patient. The pre-treatment CTs were automatically registered with their corresponding planning CT through an in-house GPU-based DIR framework. The deformation of each contoured structure was computed to account for non-rigid change in the patient setup. The Jacobian determinant for the PTVs and critical structures was used to quantify anatomical volume changes. Dose accumulation was performed to determine the actual delivered dose and dose accumulation. A landmark tool was developed to determine the uncertainty in the dose distribution due to registration error. Results: Dramatic interfraction anatomic changes leading to dosimetric variations were observed. During the treatment courses of 6–7 weeks, the parotid gland volumes changed up to 34.7%, the center-of-mass displacement of the two parotids varied in the range of 0.9–8.8mm. Mean doses were within 5% and 3% of the planned mean doses for all PTVs and CTVs, respectively. The cumulative minimum/mean/EUD doses were lower than the planned doses by 18%, 2%, and 7%, respectively for the PTV1. The ratio of the averaged cumulative cord maximum doses to the plan was 1.06±0.15. The cumulative mean doses assessed by the weekly kVCTs were significantly higher than the planned dose for the left-parotid (p=0.03) and right-parotid gland (p=0.006). The computation time was nearly real-time (∼ 45 seconds) for registering each pre-treatment CT to the planning CT and dose accumulation with registration accuracy (for kVCT) at sub-voxel level (<1.5mm). Conclusions: Real-time assessment of anatomic and dosimetric variations is feasible using the GPU-based DIR framework. Clinical implementation

  16. Real time observation of the ultrasound stimulated disintegration of optically trapped microbubbles in proximity to biological cells

    NASA Astrophysics Data System (ADS)

    Prentice, Paul; MacDonald, Michael P.; Cuschieri, Alfred; Dholakia, Kishan; Campbell, Paul

    2005-08-01

    Cells that are exposed to varying amounts of ultrasonic energy in the presence of ultrasound contrast agent (UCA) may undergo either permanent cell membrane damage (lethal sonoporation), or a transient enhancement of membrane permeability (reversible or non lethal sonoporation). The merits of each mode are clear; lethal sonoporation constitutes a significant tumour therapy weapon, whilst its less intrusive counterpart, reversible sonoporation, represents an effective non-invasive targeted drug delivery technique. Our working hypothesis for understanding this problem was that the root cause and effect in sonoporation involves the interaction of individual cells with single microbubbles, and to that end we devised an experiment that facilitates video rate observation of this specific scenario under well defined optical control. Specifically, we have constructed an innovative hybridization apparatus involving holographic optical trapping of single and multiple UCA microbubbles, together with the facility to irradiate with MHz pulsed ultrasound energy in the presence cancerous cells. This approach allows the isolation of a target microbubble from a resident population and the relocation to a [controllable] predetermined position relative to a cell within a monolayer. Frame extraction from standard framing rate video microscopy demonstrates the individuality of single microbubble-cell interactions. We describe a fluorescence microscopy protocol that will allow future study of the potential to deliver molecular species to cells, the dependence of the delivery on the initial microbubble-cell distance and to determine the targeted cell survival.

  17. Single particle optical extinction and scattering allows real time quantitative characterization of drug payload and degradation of polymeric nanoparticles

    PubMed Central

    Potenza, M. A. C.; Sanvito, T.; Argentiere, S.; Cella, C.; Paroli, B.; Lenardi, C.; Milani, P.

    2015-01-01

    The behavior of nanoparticles in biological systems is determined by their dimensions, size distribution, shape, surface chemistry, density, drug loading and stability; the characterization of these parameters in realistic conditions and the possibility to follow their evolution in vitro and in vivo are, in most of the cases, far from the capabilities of the standard characterization technologies. Optical techniques such as dynamic light scattering (DLS) are, in principle, well suited for in line characterization of nanoparticle, however their fail in characterizing the evolution of nanoparticle in solution where change in particle dimension and density is present. Here we present an in-line optical technique based on single particle extinction and scattering (SPES) overcoming the limitations typical of DLS and allowing for the efficient characterization of nanoparticle polydispersity, index of refraction and degradation dynamics in solution. Using SPES, we characterized the evolution of PLGA nanoparticles with different structures and drug payloads in solution and we compared the results with DLS. Our results suggest that SPES could be used as a process analytical technology for pharmaceutical nanoparticle production. PMID:26667064

  18. Single particle optical extinction and scattering allows real time quantitative characterization of drug payload and degradation of polymeric nanoparticles

    NASA Astrophysics Data System (ADS)

    Potenza, M. A. C.; Sanvito, T.; Argentiere, S.; Cella, C.; Paroli, B.; Lenardi, C.; Milani, P.

    2015-12-01

    The behavior of nanoparticles in biological systems is determined by their dimensions, size distribution, shape, surface chemistry, density, drug loading and stability; the characterization of these parameters in realistic conditions and the possibility to follow their evolution in vitro and in vivo are, in most of the cases, far from the capabilities of the standard characterization technologies. Optical techniques such as dynamic light scattering (DLS) are, in principle, well suited for in line characterization of nanoparticle, however their fail in characterizing the evolution of nanoparticle in solution where change in particle dimension and density is present. Here we present an in-line optical technique based on single particle extinction and scattering (SPES) overcoming the limitations typical of DLS and allowing for the efficient characterization of nanoparticle polydispersity, index of refraction and degradation dynamics in solution. Using SPES, we characterized the evolution of PLGA nanoparticles with different structures and drug payloads in solution and we compared the results with DLS. Our results suggest that SPES could be used as a process analytical technology for pharmaceutical nanoparticle production.

  19. Adaptive-optics optical coherence tomography processing using a graphics processing unit.

    PubMed

    Shafer, Brandon A; Kriske, Jeffery E; Kocaoglu, Omer P; Turner, Timothy L; Liu, Zhuolin; Lee, John Jaehwan; Miller, Donald T

    2014-01-01

    Graphics processing units are increasingly being used for scientific computing for their powerful parallel processing abilities, and moderate price compared to super computers and computing grids. In this paper we have used a general purpose graphics processing unit to process adaptive-optics optical coherence tomography (AOOCT) images in real time. Increasing the processing speed of AOOCT is an essential step in moving the super high resolution technology closer to clinical viability. PMID:25570838

  20. Simultaneous fingerprint and high-wavenumber fiber-optic Raman spectroscopy enhances real-time in vivo diagnosis of adenomatous polyps during colonoscopy.

    PubMed

    Bergholt, Mads Sylvest; Lin, Kan; Wang, Jianfeng; Zheng, Wei; Xu, Hongzhi; Huang, Qingwen; Ren, Jian-Lin; Ho, Khek Yu; Teh, Ming; Srivastava, Supriya; Wong, Benjamin; Yeoh, Khay Guan; Huang, Zhiwei

    2016-04-01

    Colorectal cancer can be prevented if detected early (e.g., precancerous polyps-adenoma). Endoscopic differential diagnosis of hyperplastic polyps (that have little or no risk of malignant transformation) and adenomas (that have prominent malignant latency) remains an unambiguous clinical challenge. Raman spectroscopy is an optical vibrational technique capable of probing biomolecular changes of tissue associated with neoplastic transformation. This work aims to apply a fiber-optic simultaneous fingerprint (FP) and high wavenumber (HW) Raman spectroscopy technique for real-time in vivo assessment of adenomatous polyps during clinical colonoscopy. We have developed a fiber-optic Raman endoscopic technique capable of simultaneously acquiring both the FP (i.e., 800-1800 cm(-1) ) and HW (i.e., 2800-3600 cm(-1) ) Raman spectra from colorectal tissue subsurface (<200 µm) for real-time assessment of colorectal carcinogenesis. In vivo FP/HW Raman spectra were acquired from 50 patients with 17 colorectal polyps during clinical colonoscopy. Prominent Raman spectral differences (p < 0.001) were found between hyperplastic (n = 118 spectra), adenoma (n = 184 spectra) that could be attributed to changes in inter- and intra-cellular proteins, lipids, DNA and water structures and conformations. Simultaneous FP/HW Raman endoscopy provides a diagnostic sensitivity of 90.9% and specificity of 83.3% for differentiating adenoma from hyperplastic polyps, which is superior to either the FP or HW Raman technique alone. This study shows that simultaneous FP/HW Raman spectroscopy technique has the potential to be a clinically powerful tool for improving early diagnosis of adenomatous polyps in vivo during colonoscopic examination. PMID:25850576

  1. Low power real time signal processing engine for optical coherence tomography systems using multi-core digital signal processor

    NASA Astrophysics Data System (ADS)

    Ali, Murtaza; Parlapalli, Renuka; John, Renu; Boppart, Stephen A.

    2011-03-01

    Optical Coherence Tomography (OCT) imaging is a high-resolution, sub-surface non-invasive imaging technique, using the principle of low coherence interferometry, that has become increasingly popular for various applications for structural and quantitative imaging [1]. Applications for OCT technology have been demonstrated in ophthalmology, dentistry, cardiology/intravascular imaging, endoscopy and intra-operative surgery, and many new applications are being researched. Due to higher sensitivity and faster rate of image acquisition, frequency domain OCT systems are now replacing the first generation time domain systems. These include spectral domain systems, which use a broadband low coherent source with spectrometer and a line scan camera based receive system, and swept source systems, that use wavelength sweeping source with a photo-detector based receive system. Both of these systems require very similar signal processing to recover the desired image from the captured digitized interference or fringe data.

  2. The potential offered by real-time, high-sensitivity monitoring of ethane in breath and some pilot studies using optical spectroscopy

    NASA Astrophysics Data System (ADS)

    Skeldon, Kenneth D.; Patterson, Claire; Wyse, Cathy A.; Gibson, Graham M.; Padgett, Miles J.; Longbottom, Chris; McMillan, Lesley C.

    2005-06-01

    Breath analysis applied to biomedical applications has gained much momentum is recent years due to the growing research demonstrating that breath gas can provide clinically useful data. Particularly exciting is the area of real-time breath analysis which, when coupled with appropriately chosen target species, can offer a novel method for non-invasive patient monitoring. Here we describe the role of ethane, a breath gas of universal appeal in assessing in vivo oxidative stress (cell damage). We first present a review of emerging applications where real-time ethane monitoring could yield original new results for healthcare. We then report on results from a portable ethane spectroscopy system (accuracy better then 100 parts per trillion (1 part in 1010) over a 1 s time response) that we have developed to exploit some of these applications. By presenting some initial results from pilot studies in the life sciences, we comment on the requirements that the next stage of optical spectroscopy technology has to meet in order to benefit clinical end-users.

  3. The research and development of the adaptive optics in ophthalmology

    NASA Astrophysics Data System (ADS)

    Wu, Chuhan; Zhang, Xiaofang; Chen, Weilin

    2015-08-01

    Recently the combination of adaptive optics and ophthalmology has made great progress and become highly effective. The retina disease is diagnosed by retina imaging technique based on scanning optical system, so the scanning of eye requires optical system characterized by great ability of anti-moving and optical aberration correction. The adaptive optics possesses high level of adaptability and is available for real time imaging, which meets the requirement of medical retina detection with accurate images. Now the Scanning Laser Ophthalmoscope and the Optical Coherence Tomography are widely used, which are the core techniques in the area of medical retina detection. Based on the above techniques, in China, a few adaptive optics systems used for eye medical scanning have been designed by some researchers from The Institute of Optics And Electronics of CAS(The Chinese Academy of Sciences); some foreign research institutions have adopted other methods to eliminate the interference of eye moving and optical aberration; there are many relevant patents at home and abroad. In this paper, the principles and relevant technique details of the Scanning Laser Ophthalmoscope and the Optical Coherence Tomography are described. And the recent development and progress of adaptive optics in the field of eye retina imaging are analyzed and summarized.

  4. Simultaneous real-time quantification of blood flow and vascular growth in the chick embryo using optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Kowalski, William J.; Teslovich, Nikola C.; Chen, Chia-Yuan; Keller, Bradley B.; Pekkan, Kerem

    2014-03-01

    Experimental and clinical data indicate that hemodynamic forces within the embryo provide critical biomechanical cues for cardiovascular morphogenesis, growth, and remodeling and that perturbed flow is a major etiology of congenital heart disease. However, embryonic flow-growth relationships are largely qualitative and poorly defined. In this work, we provide a quantitative analysis of in vivo flow and growth trends in the chick embryo using optical coherence tomography (OCT) to acquire simultaneous velocity and structural data of the right vitelline artery continuously over a ten hour period beginning at stage 16 (hour 54). We obtained 3D vessel volumes (15 μm lateral, 4.3 μm axial resolutions, 6 μm slice spacing) at 60 minute intervals, taking a B-scan time series totaling one cardiac cycle at each slice. Embryos were maintained at a constant 37°C and 60% humidity during the entire acquisition period through an inhouse built chamber. The 3D vessel lumen geometries were reconstructed manually to assess growth. Blood flow velocity was computed from the central B-scan using red blood cell particle image velocimetry. The use of extended OCT imaging as a non-invasive method for continuous and simultaneous flow and structural data can enhance our understanding of the biomechanical regulation of critical events in morphogenesis. Data acquired will be useful to validate predictive finite-element 3D growth models.

  5. Electrical resistance tomography for real-time mapping of the solid-liquid interface in tanks containing optically opaque fluids

    NASA Astrophysics Data System (ADS)

    Madupu, Amar; Mazumdar, Anindra; Zhang, Jinsong; Roelant, David; Srivastava, Rajiv

    2005-03-01

    The visualization of settled solid layers in vessels have many applications, of interest here is for facilitating the efficient retrieval of high-level radioactive waste (HLW) from underground storage tanks at Department of Energy sites. Visualization of the solids interface with opaque liquid above can"t be accomplished by regular optical imaging methods and hence our interest in using Electrical Resistance Tomography (ERT). The ideal arrangement for 3-D ERT imaging inside tanks is to use a multiple ring electrode system, which is complex and expensive. This research describes ERT imaging done with a single linear array as a benchmark study to ascertain the viability of its imaging of the interface. Experiments focused upon systematic analysis of many ERT tomograms of two simple settled solids layers (horizontal, 30o) using pulverized kaolin clay (10μdia) and water. Visualization was done using commercial ERT software. Injection current and electrode orientation were the two system parameters varied and analyzed. Reproducibility, accuracy and reliability of this ERT system will be presented.

  6. Real-time Monitoring of Sustained Drug Release using the Optical Properties of Porous Silicon Photonic Crystal Particles

    PubMed Central

    Wu, E.C.; Andrew, J.S.; Cheng, L; Freeman, W.R.; Pearson, L; Sailor, M.J.

    2011-01-01

    A controlled and observable drug delivery system that enables long-term local drug administration is reported. Biodegradable and biocompatible drug-loaded porous Si microparticles were prepared from silicon wafers, resulting in a porous 1-dimensional photonic crystal (rugate filter) approx. 12 micrometers thick and 35 micrometers across. An organic linker, 1-undecylenic acid, was attached to the Si-H terminated inner surface of the particles by hydrosilylation and the anthracycline drug daunorubicin was bound to the carboxy terminus of the linker. Degradation of the porous Si matrix in vitro was found to release the drug in a linear and sustained fashion for 30 d. The bioactivity of the released daunorubicin was verified on retinal pigment epithelial (RPE) cells. The degradation/drug delivery process was monitored in situ by digital imaging or spectroscopic measurement of the photonic resonance reflected from the nanostructured particles, and a simple linear correlation between observed wavelength and drug release was observed. Changes in the optical reflectance spectrum were sufficiently large to be visible as a distinctive red to green color change. PMID:21122914

  7. Optical Coherence Tomography for Retinal Surgery: Perioperative Analysis to Real-Time Four-Dimensional Image-Guided Surgery.

    PubMed

    Carrasco-Zevallos, Oscar M; Keller, Brenton; Viehland, Christian; Shen, Liangbo; Seider, Michael I; Izatt, Joseph A; Toth, Cynthia A

    2016-07-01

    Magnification of the surgical field using the operating microscope facilitated profound innovations in retinal surgery in the 1970s, such as pars plana vitrectomy. Although surgical instrumentation and illumination techniques are continually developing, the operating microscope for vitreoretinal procedures has remained essentially unchanged and currently limits the surgeon's depth perception and assessment of subtle microanatomy. Optical coherence tomography (OCT) has revolutionized clinical management of retinal pathology, and its introduction into the operating suite may have a similar impact on surgical visualization and treatment. In this article, we review the evolution of OCT for retinal surgery, from perioperative analysis to live volumetric (four-dimensional, 4D) image-guided surgery. We begin by briefly addressing the benefits and limitations of the operating microscope, the progression of OCT technology, and OCT applications in clinical/perioperative retinal imaging. Next, we review intraoperative OCT (iOCT) applications using handheld probes during surgical pauses, two-dimensional (2D) microscope-integrated OCT (MIOCT) of live surgery, and volumetric MIOCT of live surgery. The iOCT discussion focuses on technological advancements, applications during human retinal surgery, translational difficulties and limitations, and future directions. PMID:27409495

  8. Real-time data processing for in-line monitoring of a pharmaceutical coating process by optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Markl, Daniel; Ziegler, Jakob; Hannesschläger, Günther; Sacher, Stephan; Buchsbaum, Andreas; Leitner, Michael; Khinast, Johannes G.

    2014-05-01

    Coating of tablets is a widely applied unit operation in the pharmaceutical industry. Thickness and uniformity of the coating layer are crucial for efficacy as well as for compliance. Not only due to different initiatives it is thus essential to monitor and control the coating process in-line. Optical coherence tomography (OCT) was already shown in previous works to be a suitable candidate for in-line monitoring of coating processes. However, to utilize the full potential of the OCT technology an automatic evaluation of the OCT measurements is essential. The automatic evaluation is currently implemented in MATLAB and includes several steps: (1) extraction of features of each A-scan, (2) classification of Ascan measurements based on their features, (3) detection of interfaces (air/coating and coating/tablet core), (4) correction of distortions due to the curvature of the bi-convex tablets and the oblique orientation of the tablets, and (5) determining the coating thickness. The algorithm is tested on OCT data acquired by moving the sensor head of the OCT system across a static tablet bed. The coating thickness variations of single tablets (i.e., intra-tablet coating variability) can additionally be analyzed as OCT allows the measurement of the coating thickness on multiple displaced positions on one single tablet. Specifically, the information about those parameters emphasizes the high capability of the OCT technology to improve process understanding and to assure a high product quality.

  9. Near-field-induced optical force on a metal particle and C{sub 60}: Real-time and real-space electron dynamics simulation

    SciTech Connect

    Iwasa, Takeshi; Nobusada, Katsuyuki

    2010-10-15

    Optical forces induced by a near field are calculated for a 1-mm-sized metal particle mimicked by a jellium model and for C{sub 60} in the framework of real-time and real-space time-dependent density-functional theory combined with a nonuniform light-matter interaction formalism, fully taking account of multipole interaction. A highly localized near field nonuniformly polarizes these molecules. The locally induced polarization charges in the molecules are partly canceled by the screening charges. The polarization and screening charges generally contribute to the attractive and repulsive forces, respectively, and a sensible balance between these charges results in several peaks in the optical force as a function of the frequency of the near field. The resonance excitation does not necessarily maximally induce the net force, and the force exerted on the molecules strongly depends on the details of their electronic structures. The optical force is larger in the metal particle than in C{sub 60}. We also found that the optical force depends linearly on the intensity of the near field.

  10. A real-time structural parametric identification system based on fiber optic sensing and neural network algorithms

    NASA Astrophysics Data System (ADS)

    Wu, Zhishen; Xu, Bin

    2003-07-01

    A structural parametric identification strategy based on neural networks algorithms using dynamic macro-strain measurements in time domain from a long-gage strain sensor by fiber optic sensing technique such as Fiber Bragg Grating (FBG) sensor is developed. An array of long-gage sensors is bounded on the structure to measure reliably and accurately macro-strains. By the proposed methodology, the structural parameter of stiffness can be identified. A beam model with known mass distribution is considered as an object structure. Without any eigenvalue analysis or optimization computation, the structural parameter of stiffness can be identified. First an emulator neural network is presented to identify the beam structure in current state. Free vibration macro-strain responses of the beam structure are used to train the emulator neural network. The trained emulator neural network can be used to forecast the free vibration macro-strain response of the beam structure with enough precision and decide the difference between the free vibration macro-strain responses of other assumed structure with different structural parameters and those of the original beam structure. The root mean square (RMS) error vector is presented to evaluate the difference. Subsequently, corresponding to each assumed structure with different structural parameters, the RMS error vector can be calculated. By using the training data set composed of the structural parameters and RMS error vector, a parametric evaluation neural network is trained. A beam structure is considered as an existing structure, based on the trained parametric evaluation neural network, the stiffness of the beam structure can be forecast. It is shown that the parametric identification strategy using macro-strain measurement from long-gage sensors has the potential of being a practical tool for a health monitoring methodology applied to civil engineering structures.

  11. Real-Time Simulation

    NASA Technical Reports Server (NTRS)

    1997-01-01

    Coryphaeus Software, founded in 1989 by former NASA electronic engineer Steve Lakowske, creates real-time 3D software. Designer's Workbench, the company flagship product, is a modeling and simulation tool for the development of both static and dynamic 3D databases. Other products soon followed. Activation, specifically designed for game developers, allows developers to play and test the 3D games before they commit to a target platform. Game publishers can shorten development time and prove the "playability" of the title, maximizing their chances of introducing a smash hit. Another product, EasyT, lets users create massive, realistic representation of Earth terrains that can be viewed and traversed in real time. Finally, EasyScene software control the actions among interactive objects within a virtual world. Coryphaeus products are used on Silican Graphics workstation and supercomputers to simulate real-world performance in synthetic environments. Customers include aerospace, aviation, architectural and engineering firms, game developers, and the entertainment industry.

  12. In-situ, Real-Time Monitoring of Mechanical and Chemical Structure Changes in a V2O5 Battery Electrode Using a MEMS Optical Sensor

    SciTech Connect

    Jung, H.; Gerasopoulos, K.; Gnerlich, Markus; Talin, A. Alec; Ghodssi, Reza

    2014-06-01

    This work presents the first demonstration of a MEMS optical sensor for in-situ, real-time monitoring of both mechanical and chemical structure evolutions in a V2O5 lithium-ion battery (LIB) cathode during battery operation. A reflective membrane forms one side of a Fabry-Perot (FP) interferometer, while the other side is coated with V2O5 and exposed to electrolyte in a half-cell LIB. Using one microscope and two laser sources, both the induced membrane deflection and the corresponding Raman intensity changes are observed during lithium cycling. Results are in good agreement with the expected mechanical behavior and disorder change of the V2O5 layers, highlighting the significant potential of MEMS as enabling tools for advanced scientific investigations.

  13. Adaptive Optics Communications Performance Analysis

    NASA Technical Reports Server (NTRS)

    Srinivasan, M.; Vilnrotter, V.; Troy, M.; Wilson, K.

    2004-01-01

    The performance improvement obtained through the use of adaptive optics for deep-space communications in the presence of atmospheric turbulence is analyzed. Using simulated focal-plane signal-intensity distributions, uncoded pulse-position modulation (PPM) bit-error probabilities are calculated assuming the use of an adaptive focal-plane detector array as well as an adaptively sized single detector. It is demonstrated that current practical adaptive optics systems can yield performance gains over an uncompensated system ranging from approximately 1 dB to 6 dB depending upon the PPM order and background radiation level.

  14. Real-Time PCR

    NASA Astrophysics Data System (ADS)

    Evrard, A.; Boulle, N.; Lutfalla, G. S.

    Over the past few years there has been a considerable development of DNA amplification by polymerase chain reaction (PCR), and real-time PCR has now superseded conventional PCR techniques in many areas, e.g., the quantification of nucleic acids and genotyping. This new approach is based on the detection and quantification of a fluorescent signal proportional to the amount of amplicons generated by PCR. Real-time detection is achieved by coupling a thermocycler with a fluorimeter. This chapter discusses the general principles of quantitative real-time PCR, the different steps involved in implementing the technique, and some examples of applications in medicine. The polymerase chain reaction (PCR) provides a way of obtaining a large number of copies of a double-stranded DNA fragment of known sequence. This DNA amplification technique, developed in 1985 by K. Mullis (Cetus Corporation), saw a spectacular development over the space of a few years, revolutionising the methods used up to then in molecular biology. Indeed, PCR has many applications, such as the detection of small amounts of DNA, cloning, and quantitative analysis (assaying), each of which will be discussed further below.

  15. Wavefront sensorless adaptive optics ophthalmoscopy in the human eye

    NASA Astrophysics Data System (ADS)

    Hofer, Heidi; Sredar, Nripun; Queener, Hope; Li, Chaohong; Porter, Jason

    2011-07-01

    Wavefront sensor noise and fidelity place a fundamental limit on achievable image quality in current adaptive optics ophthalmoscopes. Additionally, the wavefront sensor `beacon' can interfere with visual experiments. We demonstrate real-time (25 Hz), wavefront sensorless adaptive optics imaging in the living human eye with image quality rivaling that of wavefront sensor based control in the same system. A stochastic parallel gradient descent algorithm directly optimized the mean intensity in retinal image frames acquired with a confocal adaptive optics scanning laser ophthalmoscope (AOSLO). When imaging through natural, undilated pupils, both control methods resulted in comparable mean image intensities. However, when imaging through dilated pupils, image intensity was generally higher following wavefront sensor-based control. Despite the typically reduced intensity, image contrast was higher, on average, with sensorless control. Wavefront sensorless control is a viable option for imaging the living human eye and future refinements of this technique may result in even greater optical gains.

  16. Adaptive optical zoom sensor.

    SciTech Connect

    Sweatt, William C.; Bagwell, Brett E.; Wick, David Victor

    2005-11-01

    In order to optically vary the magnification of an imaging system, continuous mechanical zoom lenses require multiple optical elements and use fine mechanical motion to precisely adjust the separations between individual or groups of lenses. By incorporating active elements into the optical design, we have designed and demonstrated imaging systems that are capable of variable optical magnification with no macroscopic moving parts. Changing the effective focal length and magnification of an imaging system can be accomplished by adeptly positioning two or more active optics in the optical design and appropriately adjusting the optical power of those elements. In this application, the active optics (e.g. liquid crystal spatial light modulators or deformable mirrors) serve as variable focal-length lenses. Unfortunately, the range over which currently available devices can operate (i.e. their dynamic range) is relatively small. Therefore, the key to this concept is to create large changes in the effective focal length of the system with very small changes in the focal lengths of individual elements by leveraging the optical power of conventional optical elements surrounding the active optics. By appropriately designing the optical system, these variable focal-length lenses can provide the flexibility necessary to change the overall system focal length, and therefore magnification, that is normally accomplished with mechanical motion in conventional zoom lenses.

  17. Phase Adaptation and Correction by Adaptive Optics

    NASA Astrophysics Data System (ADS)

    Tiziani, Hans J.

    2010-04-01

    Adaptive optical elements and systems for imaging or laser beam propagation are used for some time in particular in astronomy, where the image quality is degraded by atmospheric turbulence. In astronomical telescopes a deformable mirror is frequently used to compensate wavefront-errors due to deformations of the large mirror, vibrations as well as turbulence and hence to increase the image quality. In the last few years interesting elements like Spatial Light Modulators, SLM's, such as photorefractive crystals, liquid crystals and micro mirrors and membrane mirrors were introduced. The development of liquid crystals and micro mirrors was driven by data projectors as consumer products. They contain typically a matrix of individually addressable pixels of liquid crystals and flip mirrors respectively or more recently piston mirrors for special applications. Pixel sizes are in the order of a few microns and therefore also appropriate as active diffractive elements in digital holography or miniature masks. Although liquid crystals are mainly optimized for intensity modulation; they can be used for phase modulation. Adaptive optics is a technology for beam shaping and wavefront adaptation. The application of spatial light modulators for wavefront adaptation and correction and defect analysis as well as sensing will be discussed. Dynamic digital holograms are generated with liquid crystal devices (LCD) and used for wavefront correction as well as for beam shaping and phase manipulation, for instance. Furthermore, adaptive optics is very useful to extend the measuring range of wavefront sensors and for the wavefront adaptation in order to measure and compare the shape of high precision aspherical surfaces.

  18. Net-zero Building Cluster Simulations and On-line Energy Forecasting for Adaptive and Real-Time Control and Decisions

    NASA Astrophysics Data System (ADS)

    Li, Xiwang

    Buildings consume about 41.1% of primary energy and 74% of the electricity in the U.S. Moreover, it is estimated by the National Energy Technology Laboratory that more than 1/4 of the 713 GW of U.S. electricity demand in 2010 could be dispatchable if only buildings could respond to that dispatch through advanced building energy control and operation strategies and smart grid infrastructure. In this study, it is envisioned that neighboring buildings will have the tendency to form a cluster, an open cyber-physical system to exploit the economic opportunities provided by a smart grid, distributed power generation, and storage devices. Through optimized demand management, these building clusters will then reduce overall primary energy consumption and peak time electricity consumption, and be more resilient to power disruptions. Therefore, this project seeks to develop a Net-zero building cluster simulation testbed and high fidelity energy forecasting models for adaptive and real-time control and decision making strategy development that can be used in a Net-zero building cluster. The following research activities are summarized in this thesis: 1) Development of a building cluster emulator for building cluster control and operation strategy assessment. 2) Development of a novel building energy forecasting methodology using active system identification and data fusion techniques. In this methodology, a systematic approach for building energy system characteristic evaluation, system excitation and model adaptation is included. The developed methodology is compared with other literature-reported building energy forecasting methods; 3) Development of the high fidelity on-line building cluster energy forecasting models, which includes energy forecasting models for buildings, PV panels, batteries and ice tank thermal storage systems 4) Small scale real building validation study to verify the performance of the developed building energy forecasting methodology. The outcomes of

  19. Near-real-time radiotherapy dosimetry using optically stimulated luminescence of Al{sub 2}O{sub 3}:C: Mathematical models and preliminary results

    SciTech Connect

    Gaza, R.; McKeever, S.W.S.; Akselrod, M.S.

    2005-04-01

    In this paper we report investigations aimed toward applying optically stimulated luminescence (OSL) of Al{sub 2}O{sub 3}:C for near-real-time medical dosimetry, especially in radiotherapy. The classical mathematical model normally used for the description of OSL phenomena was expanded to predict the behavior of the luminescence signal in the case when the OSL sample is simultaneously irradiated and optically stimulated. The predictions obtained were used to develop different measurement approaches and correction algorithms for the luminescence signals, thus enabling dose estimation from OSL during rather then after the irradiation procedure. Radiation probes with diameters of less than 1 mm, suitable for the envisioned in-vivo measurements were constructed by attaching small Al{sub 2}O{sub 3}:C crystals to optical fiber cables. The OSL fiber probes and a purpose-built, portable OSL stimulation and readout system were used to measure doses at speeds up to 1 data point every 3s, under irradiation at dose rates of the same order of magnitude as those found in conventional radiotherapy techniques. The corrected OSL signal was found to be proportional to the absorbed dose, and accurately followed sudden transitions in the irradiation dose rate.

  20. Simple distortion-invariant optical identification tag based on encrypted binary-phase computer-generated hologram for real-time vehicle identification and verification

    NASA Astrophysics Data System (ADS)

    Kim, Cheol-Su

    2010-11-01

    A simple distortion-invariant optical identification (ID) tag is presented for real-time vehicle identification and verification. The proposed scheme is composed of image encryption, ID tag creation, image decryption, and optical correlation for verification. To create the ID tag, a binary-phase computer-generated hologram (BPCGH) of a symbol image representing a vehicle is created using a simulated annealing algorithm. The BPCGH is then encrypted using an XOR operation and enlargement transformed into polar coordinates. The resulting ID tag is then attached to the vehicle. As the BPCGH consists of only binary phase values, it is robust to external distortions. To identify and verify the vehicle, several reverse processes are required, such as capturing the ID tag with a camera, extracting the ID tag from the captured image, transformation of the ID tag into rectangular coordinates, decryption, an inverse Fourier transform, and correlation. Computer simulation and experimental results confirm that the proposed optical ID tag is secure and robust to such distortions as scaling, rotation, cropping (scratches), and random noise. The ID tag can also be easily implemented, as it consists of only binary phase components.

  1. Graphics processing unit aided highly stable real-time spectral-domain optical coherence tomography at 1375 nm based on dual-coupled-line subtraction

    NASA Astrophysics Data System (ADS)

    Kim, Ji-hyun; Han, Jae-Ho; Jeong, Jichai

    2013-04-01

    We have proposed and demonstrated a highly stable spectral-domain optical coherence tomography (SD-OCT) system based on dual-coupled-line subtraction. The proposed system achieved an ultrahigh axial resolution of 5 μm by combining four kinds of spectrally shifted superluminescent diodes at 1375 nm. Using the dual-coupled-line subtraction method, we made the system insensitive to fluctuations of the optical intensity that can possibly arise in various clinical and experimental conditions. The imaging stability was verified by perturbing the intensity by bending an optical fiber, our system being the only one to reduce the noise among the conventional systems. Also, the proposed method required less computational complexity than conventional mean- and median-line subtraction. The real-time SD-OCT scheme was implemented by graphics processing unit aided signal processing. This is the first reported reduction method for A-line-wise fixed-pattern noise in a single-shot image without estimating the DC component.

  2. The real-time control system of NAOMI

    NASA Astrophysics Data System (ADS)

    Goodsell, Stephen J.; Myers, Richard M.; Clark, Paul; Buscher, D.

    2004-09-01

    The Nasmyth Adaptive Optics for Multi-purpose Instrumentation (NAOMI) is the common-user Adaptive Optics (AO) system on the 4.2m William Herschel Telescope (WHT) operated by the Isaac Newton Group of Telescopes (ING). The system contains a 76-element Deformable Mirror (DM) containing 228-degrees of freedom with Strain Gauge (SG) feedback capabilities and an 8x8 Shack Hartmann Wavefront Sensor (WFS). The wavefront corrector and wavefront sensor are controlled and coordinated by the third key component of the adaptive optics system, the Real-Time Control System (RTCS). The RTCS manages and processes interrupts and inputs including WFS image data and SG feedback signals. It also provides calculated drive signals for the system's DM and Fast Steering Mirror (FSM) as well as debug, visualisation and logging data to the user's workstation. This paper contains a description of both the control hardware and software architecture of the RTCS including the WFS and SG real-time control loops. Each loop contains 8 Texas Instrument TMS320C44 digital signal processors, housed on DBV44 cards seated inside the NAOMI Real-Time Control Rack (RTCR) VME crate. A description of the complete processor architecture and ring structure is provided, detailing each processor's connections and external hardware communications. The described software architecture incorporates Bulk Synchronisation Parallelism (BSP) methodology, Interrupt Service Routines (ISRs), "General Purpose" (GP) messaging, Lovetrains, Cowcatchers, the Data Transfer Mechanism (DTM) and Parameter Block Transactions (PBT). The paper concludes with revealing planned enhancements to the current RTCS.

  3. Development of a frameless stereotactic radiosurgery system based on real-time 6D position monitoring and adaptive head motion compensation

    NASA Astrophysics Data System (ADS)

    Wiersma, Rodney D.; Wen, Zhifei; Sadinski, Meredith; Farrey, Karl; Yenice, Kamil M.

    2010-01-01

    Stereotactic radiosurgery delivers radiation with great spatial accuracy. To achieve sub-millimeter accuracy for intracranial SRS, a head ring is rigidly fixated to the skull to create a fixed reference. For some patients, the invasiveness of the ring can be highly uncomfortable and not well tolerated. In addition, placing and removing the ring requires special expertise from a neurosurgeon, and patient setup time for SRS can often be long. To reduce the invasiveness, hardware limitations and setup time, we are developing a system for performing accurate head positioning without the use of a head ring. The proposed method uses real-time 6D optical position feedback for turning on and off the treatment beam (gating) and guiding a motor-controlled 3D head motion compensation stage. The setup consists of a central control computer, an optical patient motion tracking system and a 3D motion compensation stage attached to the front of the LINAC couch. A styrofoam head cast was custom-built for patient support and was mounted on the compensation stage. The motion feedback of the markers was processed by the control computer, and the resulting motion of the target was calculated using a rigid body model. If the target deviated beyond a preset position of 0.2 mm, an automatic position correction was performed with stepper motors to adjust the head position via the couch mount motion platform. In the event the target deviated more than 1 mm, a safety relay switch was activated and the treatment beam was turned off. The feasibility of the concept was tested using five healthy volunteers. Head motion data were acquired with and without the use of motion compensation over treatment times of 15 min. On average, test subjects exceeded the 0.5 mm tolerance 86% of the time and the 1.0 mm tolerance 45% of the time without motion correction. With correction, this percentage was reduced to 5% and 2% for the 0.5 mm and 1.0 mm tolerances, respectively.

  4. Real time Faraday spectrometer

    DOEpatents

    Smith, Jr., Tommy E.; Struve, Kenneth W.; Colella, Nicholas J.

    1991-01-01

    This invention uses a dipole magnet to bend the path of a charged particle beam. As the deflected particles exit the magnet, they are spatially dispersed in the bend-plane of the magnet according to their respective momenta and pass to a plurality of chambers having Faraday probes positioned therein. Both the current and energy distribution of the particles is then determined by the non-intersecting Faraday probes located along the chambers. The Faraday probes are magnetically isolated from each other by thin metal walls of the chambers, effectively providing real time current-versus-energy particle measurements.

  5. Adaptive Optics for Industry and Medicine

    NASA Astrophysics Data System (ADS)

    Dainty, Christopher

    2008-01-01

    at Iris AO (poster paper) / Michael A. Helmbrecht ... [et al.]. Electrostatic push pull mirror improvernents in visual optics (poster paper) / S. Bonora and L. Poletto. 25cm bimorph mirror for petawatt laser / S. Bonora ... [et al.]. Hysteresis compensation for piezo deformable mirror (poster paper) / H. Song ... [et al.]. Static and dynamic responses of an adaptive optics ferrofluidic mirror (poster paper) / A. Seaman ... [et al.]. New HDTV (1920 x 1080) phase-only SLM (poster paper) / Stefan Osten and Sven Krueger. Monomorph large aperture deformable mirror for laser applications (poster paper) / J-C Sinquin, J-M Lurcon, C. Guillemard. Low cost, high speed for adaptive optics control (oral paper) / Christopher D. Saunter and Gordon D. Love. Open loop woofer-tweeter adaptive control on the LAO multi-conjugate adaptive optics testbed (oral paper) / Edward Laag, Don Gavel and Mark Ammons -- pt. 2. Wavefront sensors. Wave front sensorless adaptive optics for imaging and microscopy (invited paper) / Martin J. Booth, Delphine Débarre and Tony Wilson. A fundamental limit for wavefront sensing (oral paper) / Carl Paterson. Coherent fibre-bundle wavefront sensor (oral paper) / Brian Vohnsen, I. Iglesias and Pablo Artal. Maximum-likelihood methods in wave-front sensing: nuisance parameters (oral paper) / David Lara, Harrison H. Barrett, and Chris Dainty. Real-time wavefront sensing for ultrafast high-power laser beams (oral paper) / Juan M. Bueno ... [et al.]. Wavefront sensing using a random phase screen (oral paper) / M. Loktev, G. Vdovin and O. Soloviev. Quadri-Wave Lateral Shearing Interferometry: a new mature technique for wave front sensing in adaptive optics (oral paper) / Benoit Wattellier ... [et al.]. In vivo measurement of ocular aberrations with a distorted grating wavefront sensor (oral paper) / P. Harrison ... [et al.]. Position-sensitive detector designed with unusual CMOS layout strategies for a Hartman-Shack wavefront sensor (oral Paper) / Davies W. de Lima

  6. Real-time optical diagnosis of the rat brain exposed to a laser-induced shock wave: observation of spreading depolarization, vasoconstriction and hypoxemia-oligemia.

    PubMed

    Sato, Shunichi; Kawauchi, Satoko; Okuda, Wataru; Nishidate, Izumi; Nawashiro, Hiroshi; Tsumatori, Gentaro

    2014-01-01

    Despite many efforts, the pathophysiology and mechanism of blast-induced traumatic brain injury (bTBI) have not yet been elucidated, partially due to the difficulty of real-time diagnosis and extremely complex factors determining the outcome. In this study, we topically applied a laser-induced shock wave (LISW) to the rat brain through the skull, for which real-time measurements of optical diffuse reflectance and electroencephalogram (EEG) were performed. Even under conditions showing no clear changes in systemic physiological parameters, the brain showed a drastic light scattering change accompanied by EEG suppression, which indicated the occurrence of spreading depression, long-lasting hypoxemia and signal change indicating mitochondrial energy impairment. Under the standard LISW conditions examined, hemorrhage and contusion were not apparent in the cortex. To investigate events associated with spreading depression, measurement of direct current (DC) potential, light scattering imaging and stereomicroscopic observation of blood vessels were also conducted for the brain. After LISW application, we observed a distinct negative shift in the DC potential, which temporally coincided with the transit of a light scattering wave, showing the occurrence of spreading depolarization and concomitant change in light scattering. Blood vessels in the brain surface initially showed vasodilatation for 3-4 min, which was followed by long-lasting vasoconstriction, corresponding to hypoxemia. Computer simulation based on the inverse Monte Carlo method showed that hemoglobin oxygen saturation declined to as low as ∼35% in the long-term hypoxemic phase. Overall, we found that topical application of a shock wave to the brain caused spreading depolarization/depression and prolonged severe hypoxemia-oligemia, which might lead to pathological conditions in the brain. Although further study is needed, our findings suggest that spreading depolarization/depression is one of the key events

  7. Real-Time Optical Diagnosis of the Rat Brain Exposed to a Laser-Induced Shock Wave: Observation of Spreading Depolarization, Vasoconstriction and Hypoxemia-Oligemia

    PubMed Central

    Sato, Shunichi; Kawauchi, Satoko; Okuda, Wataru; Nishidate, Izumi; Nawashiro, Hiroshi; Tsumatori, Gentaro

    2014-01-01

    Despite many efforts, the pathophysiology and mechanism of blast-induced traumatic brain injury (bTBI) have not yet been elucidated, partially due to the difficulty of real-time diagnosis and extremely complex factors determining the outcome. In this study, we topically applied a laser-induced shock wave (LISW) to the rat brain through the skull, for which real-time measurements of optical diffuse reflectance and electroencephalogram (EEG) were performed. Even under conditions showing no clear changes in systemic physiological parameters, the brain showed a drastic light scattering change accompanied by EEG suppression, which indicated the occurrence of spreading depression, long-lasting hypoxemia and signal change indicating mitochondrial energy impairment. Under the standard LISW conditions examined, hemorrhage and contusion were not apparent in the cortex. To investigate events associated with spreading depression, measurement of direct current (DC) potential, light scattering imaging and stereomicroscopic observation of blood vessels were also conducted for the brain. After LISW application, we observed a distinct negative shift in the DC potential, which temporally coincided with the transit of a light scattering wave, showing the occurrence of spreading depolarization and concomitant change in light scattering. Blood vessels in the brain surface initially showed vasodilatation for 3–4 min, which was followed by long-lasting vasoconstriction, corresponding to hypoxemia. Computer simulation based on the inverse Monte Carlo method showed that hemoglobin oxygen saturation declined to as low as ∼35% in the long-term hypoxemic phase. Overall, we found that topical application of a shock wave to the brain caused spreading depolarization/depression and prolonged severe hypoxemia-oligemia, which might lead to pathological conditions in the brain. Although further study is needed, our findings suggest that spreading depolarization/depression is one of the key

  8. Real-time imaging of RGC death with a cell-impermeable nucleic acid dyeing compound after optic nerve crush in a murine model.

    PubMed

    Tsuda, Satoru; Tanaka, Yuji; Kunikata, Hiroshi; Yokoyama, Yu; Yasuda, Masayuki; Ito, Azusa; Nakazawa, Toru

    2016-05-01

    The retinal ganglion cells (RGCs) are the main source of therapeutic targets for neuroprotective glaucoma treatment, and evaluating RGCs is key for effective glaucoma care. Thus, we developed a minimally invasive, quick, real-time method to evaluate RGC death in mice. In this article we describe the details of our method, report new results obtained from C57BL/6J mice, and report that our method was usable in wild type (WT) and knockout (KO) mice lacking an RGC-death-suppressing gene. It used a non-invasive confocal scanning laser ophthalmoscope (cSLO) and a low molecular weight, photo-switching, cell-impermeant, fluorescent nucleic acid dyeing compound, SYTOX orange (SO). The RGCs were retrogradely labeled with Fluorogold (FG), the optic nerve was crushed (ONC), and SO was injected into the vitreous. After ten minutes, RGC death was visualized with cSLO in vivo. The retinas were then extracted and flat mounted for histological observation. SO-labeled RGCs were counted in vivo and FG-labeled RGCs were counted in retinal flat mounts. The time course of RGC death was examined in Calpastatin KO mice and wild type (WT) mice. Our in vivo imaging method revealed that SO-positive dead RGCs were mainly present from 4 to 6 days after ONC, and the peak of RGC death was after 5 days. Moreover, the number of SO-positive dead RGCs after 5 days differed significantly in the Calpastatin KO mice and the WT mice. Counting FG-labeled RGCs in isolated retinas confirmed these results. Thus, real-time imaging with SO was able to quickly quantify ONC-induced RGC death. This technique may aid research into RGC death and the development of new neuroprotective therapies for glaucoma. PMID:27013099

  9. Self-Management of Patient Body Position, Pose, and Motion Using Wide-Field, Real-Time Optical Measurement Feedback: Results of a Volunteer Study

    SciTech Connect

    Parkhurst, James M.; Price, Gareth J.; Sharrock, Phil J.; Jackson, Andrew S.N.; Stratford, Julie; Moore, Christopher J.

    2013-12-01

    Purpose: We present the results of a clinical feasibility study, performed in 10 healthy volunteers undergoing a simulated treatment over 3 sessions, to investigate the use of a wide-field visual feedback technique intended to help patients control their pose while reducing motion during radiation therapy treatment. Methods and Materials: An optical surface sensor is used to capture wide-area measurements of a subject's body surface with visualizations of these data displayed back to them in real time. In this study we hypothesize that this active feedback mechanism will enable patients to control their motion and help them maintain their setup pose and position. A capability hierarchy of 3 different level-of-detail abstractions of the measured surface data is systematically compared. Results: Use of the device enabled volunteers to increase their conformance to a reference surface, as measured by decreased variability across their body surfaces. The use of visual feedback also enabled volunteers to reduce their respiratory motion amplitude to 1.7 ± 0.6 mm compared with 2.7 ± 1.4 mm without visual feedback. Conclusions: The use of live feedback of their optically measured body surfaces enabled a set of volunteers to better manage their pose and motion when compared with free breathing. The method is suitable to be taken forward to patient studies.

  10. Field programmable gate-array-based real-time optical Doppler tomography system for in vivo imaging of cardiac dynamics in the chick embryo

    NASA Astrophysics Data System (ADS)

    Thrane, Lars; Larsen, Henning E.; Norozi, Kambiz; Pedersen, Finn; Thomsen, Jakob B.; Trojer, Maja; Yelbuz, Talât Mesud

    2009-02-01

    We demonstrate a field programmable gate-array-based real-time optical Doppler tomography system. A complex-valued bandpass filter is used for the first time in optical coherence tomography signal processing to create the analytic signal. This method simplifies the filter design, and allows efficient and compact implementation by combining the conversion to an analytic signal with a pulse shaping function without the need for extra resources as compared to the Hilbert transform method. The conversion of the analytic signal to amplitude and phase is done by use of the coordinate rotation digital computer (CORDIC) algorithm, which is an efficient algorithm that maps well to the field programmable gate array. Flow phantom experiments, and the use of this system for in vivo imaging of cardiac dynamics in the chick embryo, are presented. We demonstrate the visualization of blood flow in the early embryonic heart as well as in the aorta, small peripheric vitelline vessels, and coronary arteries of fully formed chick hearts.

  11. Real-time optical wireless transmissions of digital TV signals using white InGaN LEDs grown with an asymmetric quantum barrier.

    PubMed

    Tsai, Chia-Lung; Chen, Yen-Jen

    2015-10-19

    The feasibility of using InGaN LEDs grown with asymmetric barrier layer (ABL) as transmitters in visible light communications is investigated experimentally. Compared with normal LEDs, the improvement in the spontaneous emission rate due to enhanced carrier localization and better uniformity of carrier distribution in ABL-containing MQWs leads to the fabricated LEDs can exhibit a 32.6% (@ 350 mA) increase in emission intensity and a 10.5% increase in modulation bandwidth. After eliminating the slow-responding phosphorescent components emitting from the phosphor-converted white LEDs, an open eye-diagram at 180 Mb/s is demonstrated over a distance of 100 cm in directed line-of-sight optical links. With the use of proposed LEDs, real-time transmissions of digital TV signals over a moderate distance (~100 cm) in free space is shown to be available in a 150 Mbit/s white LED-based optical link with conventional on-off keying modulation. PMID:26480463

  12. Adaptive Optics for Large Telescopes

    SciTech Connect

    Olivier, S

    2008-06-27

    The use of adaptive optics was originally conceived by astronomers seeking to correct the blurring of images made with large telescopes due to the effects of atmospheric turbulence. The basic idea is to use a device, a wave front corrector, to adjust the phase of light passing through an optical system, based on some measurement of the spatial variation of the phase transverse to the light propagation direction, using a wave front sensor. Although the original concept was intended for application to astronomical imaging, the technique can be more generally applied. For instance, adaptive optics systems have been used for several decades to correct for aberrations in high-power laser systems. At Lawrence Livermore National Laboratory (LLNL), the world's largest laser system, the National Ignition Facility, uses adaptive optics to correct for aberrations in each of the 192 beams, all of which must be precisely focused on a millimeter scale target in order to perform nuclear physics experiments.

  13. Adaptive optics for space debris tracking

    NASA Astrophysics Data System (ADS)

    Bennet, Francis; D'Orgeville, Celine; Gao, Yue; Gardhouse, William; Paulin, Nicolas; Price, Ian; Rigaut, Francois; Ritchie, Ian T.; Smith, Craig H.; Uhlendorf, Kristina; Wang, Yanjie

    2014-07-01

    Space debris in Low Earth Orbit (LEO) is becoming an increasing threat to satellite and spacecraft. A reliable and cost effective method for detecting possible collisions between orbiting objects is required to prevent an exponential growth in the number of debris. Current RADAR survey technologies used to monitor the orbits of thousands of space debris objects are relied upon to manoeuvre operational satellites to prevent possible collisions. A complimentary technique, ground-based laser LIDAR (Light Detection and Ranging) have been used to track much smaller objects with higher accuracy than RADAR, giving greater prediction of possible collisions and avoiding unnecessary manoeuvring. Adaptive optics will play a key role in any ground based LIDAR tracking system as a cost effective way of utilising smaller ground stations or less powerful lasers. The use of high power and high energy lasers for the orbital modification of debris objects will also require an adaptive optic system to achieve the high photon intensity on the target required for photon momentum transfer and laser ablation. EOS Space Systems have pioneered the development of automated laser space debris tracking for objects in low Earth orbit. The Australian National University have been developing an adaptive optics system to improve this space debris tracking capability at the EOS Space Systems Mount Stromlo facility in Canberra, Australia. The system is integrated with the telescope and commissioned as an NGS AO system before moving on to LGS AO and tracking operations. A pulsed laser propagated through the telescope is used to range the target using time of flight data. Adaptive optics is used to increase the maximum range and number or targets available to the LIDAR system, by correcting the uplink laser beam. Such a system presents some unique challenges for adaptive optics: high power lasers reflecting off deformable mirrors, high slew rate tracking, and variable off-axis tracking correction. A

  14. Adaptation of a Phytophthora ramorum Real-Time Polymerase Chain Reaction Assay based on a mitochondrial gene region for use on the Cepheid SmartCycler

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Detection of Phytophthora ramorum (causal agent of sudden oak death) in U.S. commercial nurseries has led to quarantine regulations including inspection of nurseries in infested areas. Since P. ramorum can be difficult to culture from symptomatic tissue, methods such as real-time PCR provide rapid ...

  15. Real time automated inspection

    DOEpatents

    Fant, Karl M.; Fundakowski, Richard A.; Levitt, Tod S.; Overland, John E.; Suresh, Bindinganavle R.; Ulrich, Franz W.

    1985-01-01

    A method and apparatus relating to the real time automatic detection and classification of characteristic type surface imperfections occurring on the surfaces of material of interest such as moving hot metal slabs produced by a continuous steel caster. A data camera transversely scans continuous lines of such a surface to sense light intensities of scanned pixels and generates corresponding voltage values. The voltage values are converted to corresponding digital values to form a digital image of the surface which is subsequently processed to form an edge-enhanced image having scan lines characterized by intervals corresponding to the edges of the image. The edge-enhanced image is thresholded to segment out the edges and objects formed by the edges are segmented out by interval matching and bin tracking. Features of the objects are derived and such features are utilized to classify the objects into characteristic type surface imperfections.

  16. Real time automated inspection

    DOEpatents

    Fant, K.M.; Fundakowski, R.A.; Levitt, T.S.; Overland, J.E.; Suresh, B.R.; Ulrich, F.W.

    1985-05-21

    A method and apparatus are described relating to the real time automatic detection and classification of characteristic type surface imperfections occurring on the surfaces of material of interest such as moving hot metal slabs produced by a continuous steel caster. A data camera transversely scans continuous lines of such a surface to sense light intensities of scanned pixels and generates corresponding voltage values. The voltage values are converted to corresponding digital values to form a digital image of the surface which is subsequently processed to form an edge-enhanced image having scan lines characterized by intervals corresponding to the edges of the image. The edge-enhanced image is thresholded to segment out the edges and objects formed by the edges by interval matching and bin tracking. Features of the objects are derived and such features are utilized to classify the objects into characteristic type surface imperfections. 43 figs.

  17. Adaptive Optics for Industry and Medicine

    NASA Astrophysics Data System (ADS)

    Dainty, Christopher

    2008-01-01

    at Iris AO (poster paper) / Michael A. Helmbrecht ... [et al.]. Electrostatic push pull mirror improvernents in visual optics (poster paper) / S. Bonora and L. Poletto. 25cm bimorph mirror for petawatt laser / S. Bonora ... [et al.]. Hysteresis compensation for piezo deformable mirror (poster paper) / H. Song ... [et al.]. Static and dynamic responses of an adaptive optics ferrofluidic mirror (poster paper) / A. Seaman ... [et al.]. New HDTV (1920 x 1080) phase-only SLM (poster paper) / Stefan Osten and Sven Krueger. Monomorph large aperture deformable mirror for laser applications (poster paper) / J-C Sinquin, J-M Lurcon, C. Guillemard. Low cost, high speed for adaptive optics control (oral paper) / Christopher D. Saunter and Gordon D. Love. Open loop woofer-tweeter adaptive control on the LAO multi-conjugate adaptive optics testbed (oral paper) / Edward Laag, Don Gavel and Mark Ammons -- pt. 2. Wavefront sensors. Wave front sensorless adaptive optics for imaging and microscopy (invited paper) / Martin J. Booth, Delphine Débarre and Tony Wilson. A fundamental limit for wavefront sensing (oral paper) / Carl Paterson. Coherent fibre-bundle wavefront sensor (oral paper) / Brian Vohnsen, I. Iglesias and Pablo Artal. Maximum-likelihood methods in wave-front sensing: nuisance parameters (oral paper) / David Lara, Harrison H. Barrett, and Chris Dainty. Real-time wavefront sensing for ultrafast high-power laser beams (oral paper) / Juan M. Bueno ... [et al.]. Wavefront sensing using a random phase screen (oral paper) / M. Loktev, G. Vdovin and O. Soloviev. Quadri-Wave Lateral Shearing Interferometry: a new mature technique for wave front sensing in adaptive optics (oral paper) / Benoit Wattellier ... [et al.]. In vivo measurement of ocular aberrations with a distorted grating wavefront sensor (oral paper) / P. Harrison ... [et al.]. Position-sensitive detector designed with unusual CMOS layout strategies for a Hartman-Shack wavefront sensor (oral Paper) / Davies W. de Lima

  18. Real-time display with large field of view on fourier domain optical coherence tomography at 1310 nm wavelength for dermatology

    NASA Astrophysics Data System (ADS)

    Xiao, Qing; Hou, Jue; Fu, Ling

    2012-06-01

    A Fourier domain optical coherence tomography (OCT) system with 1310 nm light was demonstrated to study inflammatory human skin and the skin coated with a moisturizer in vivo. By using a graphics processing unit (GPU), the display rate could reach 20 frames/s with 1000 A-scans contained in one image. The field of view (FOV) of the cross-sectional image is 7 mm in the lateral direction and the penetration depth is ˜1 mm in skin. The result shows that, in inflammatory skin, the epidermis became thicker and had a decreased scattering; furthermore, the region of the severe lesion present an uneven thickness of the epidermis compared with the peripheral area. For the result of a finger tip coated with the moisturizer, the antireflection effect was significant and the stratum corneum became more transparent. In this letter, we demonstrated that real-time display with a large FOV could enable screening of a large tissue area; thereby increasing the dermatologic diagnostic potential of the method by permitting a comparison of the lesion and the normal peripheral region.

  19. A Physics-Based Modeling and Real-Time Simulation of Biomechanical Diffusion Process Through Optical Imaged Alveolar Tissues on Graphical Processing Units

    NASA Astrophysics Data System (ADS)

    Kaya, Ilhan; Santhanam, Anand P.; Lee, Kye-Sung; Meemon, Panomsak; Papp, Nicolene; Rolland, Jannick P.

    Tissue engineering has broad applications from creating the much-needed engineered tissue and organ structures for regenerative medicine to providing in vitro testbeds for drug testing. In the latter, application domain, creating alveolar lung tissue, and simulating the diffusion process of oxygen and other possible agents from the air into the blood stream as well as modeling the removal of carbon dioxide and other possible entities from the blood stream are of critical importance to simulating lung functions in various environments. In this chapter, we propose a physics-based model to simulate the alveolar gas exchange and the alveolar process. Tissue engineers, for the first time, may utilize these simulation results to better understand the underlying gas exchange process and properly adjust the tissue growing cycles. In this work, alveolar tissues are imaged by means of an optical coherence microscopy (OCM) system developed in our laboratory. As a consequence, 3D alveoli tissue data with its inherent complex boundary is taken as input to the system, which is based on computational fluid mechanics in simulating the alveolar gas exchange. The visualization and the simulation of diffusion of the air into the blood through the alveoli tissue is performed using a state-of-art graphics processing unit (GPU). Results show the real-time simulation of the gas exchange through the 2D alveoli tissue.

  20. Real-time monitoring of benzene, toluene, and p-xylene in a photoreaction chamber with a tunable mid-infrared laser and ultraviolet differential optical absorption spectroscopy.

    PubMed

    Parsons, Matthew T; Sydoryk, Ihor; Lim, Alan; McIntyre, Thomas J; Tulip, John; Jäger, Wolfgang; McDonald, Karen

    2011-02-01

    We describe the implementation of a mid-infrared laser-based trace gas sensor with a photoreaction chamber, used for reproducing chemical transformations of benzene, toluene, and p-xylene (BTX) gases that may occur in the atmosphere. The system performance was assessed in the presence of photoreaction products including aerosol particles. A mid-infrared external cavity quantum cascade laser (EC-QCL)-tunable from 9.41-9.88 μm (1012-1063 cm(-1))-was used to monitor gas phase concentrations of BTX simultaneously and in real time during chemical processing of these compounds with hydroxyl radicals in a photoreaction chamber. Results are compared to concurrent measurements using ultraviolet differential optical absorption spectroscopy (UV DOAS). The EC-QCL based system provides quantitation limits of approximately 200, 200, and 600 parts in 10(9) (ppb) for benzene, toluene, and p-xylene, respectively, which represents a significant improvement over our previous work with this laser system. Correspondingly, we observe the best agreement between the EC-QCL measurements and the UV DOAS measurements with benzene, followed by toluene, then p-xylene. Although BTX gas-detection limits are not as low for the EC-QCL system as for UV DOAS, an unidentified by-product of the photoreactions was observed with the EC-QCL, but not with the UV DOAS system. PMID:21283225

  1. Reflection-mode micro-spherical fiber-optic probes for in vitro real-time and single-cell level pH sensing

    PubMed Central

    Yang, Qingbo; Wang, Hanzheng; Lan, Xinwei; Cheng, Baokai; Chen, Sisi; Shi, Honglan; Xiao, Hai; Ma, Yinfa

    2014-01-01

    pH sensing at the single-cell level without negatively affecting living cells is very important but still a remaining issue in the biomedical studies. A 70 μm reflection-mode fiber-optic micro-pH sensor was designed and fabricated by dip-coating thin layer of organically modified aerogel onto a tapered spherical probe head. A pH sensitive fluorescent dye 2′, 7′-Bis (2-carbonylethyl)-5(6)-carboxyfluorescein (BCECF) was employed and covalently bonded within the aerogel networks. By tuning the alkoxide mixing ratio and adjusting hexamethyldisilazane (HMDS) priming procedure, the sensor can be optimized to have high stability and pH sensing ability. The in vitro real-time sensing capability was then demonstrated in a simple spectroscopic way, and showed linear measurement responses with a pH resolution up to an average of 0.049 pH unit within a narrow, but biological meaningful pH range of 6.12–7.81. Its novel characterizations of high spatial resolution, reflection mode operation, fast response and high stability, great linear response within biological meaningful pH range and high pH resolutions, make this novel pH probe a very cost-effective tool for chemical/biological sensing, especially within the single cell level research field. PMID:25530670

  2. High-resolution retinal imaging using adaptive optics and Fourier-domain optical coherence tomography

    DOEpatents

    Olivier, Scot S.; Werner, John S.; Zawadzki, Robert J.; Laut, Sophie P.; Jones, Steven M.

    2010-09-07

    This invention permits retinal images to be acquired at high speed and with unprecedented resolution in three dimensions (4.times.4.times.6 .mu.m). The instrument achieves high lateral resolution by using adaptive optics to correct optical aberrations of the human eye in real time. High axial resolution and high speed are made possible by the use of Fourier-domain optical coherence tomography. Using this system, we have demonstrated the ability to image microscopic blood vessels and the cone photoreceptor mosaic.

  3. Coherent Digital Holographic Adaptive Optics

    NASA Astrophysics Data System (ADS)

    Liu, Changgeng

    A new type of adaptive optics (AO) based on the principles of digital holography (DH) is proposed and developed for the use in wide-field and confocal retinal imaging. Digital holographic adaptive optics (DHAO) dispenses with the wavefront sensor and wavefront corrector of the conventional AO system. DH is an emergent imaging technology that gives direct numerical access to the phase of the optical field, thus allowing precise control and manipulation of the optical field. Incorporation of DH in an ophthalmic imaging system can lead to versatile imaging capabilities at substantially reduced complexity and cost of the instrument. A typical conventional AO system includes several critical hardware pieces: spatial light modulator, lenslet array, and a second CCD camera in addition to the camera for imaging. The proposed DHAO system replaces these hardware components with numerical processing for wavefront measurement and compensation of aberration through the principles of DH. (Abstract shortened by UMI.).

  4. Manufacturing of the ESO adaptive optics facility

    NASA Astrophysics Data System (ADS)

    Arsenault, R.,; Madec, P.-Y.; Hubin, N.; Stroebele, S.; Paufique, J.; Vernet, E.; Hackenberg, W.; Pirard, J.-F.; Jochum, L.; Glindemann, A.; Jost, A.; Conzelmann, R.; Kiekebusch, M.; Tordo, S.; Lizon, J.-L.; Donaldson, R.; Fedrigo, E.; Soenke, C.; Duchateau, M.; Bruton, A.; Delabre, B.; Downing, M.; Reyes, J.; Kolb, J.; Bechet, C.; Lelouarn, M.; Bonaccini Calia, D.; Quattri, M.; Guidolin, I.; Buzzoni, B.; Dupuy, C.; Guzman, R.; Comin, M.; Silber, A.; Quentin, J.; La Penna, P.; Manescau, A.; Jolley, P.; Heinz, V.; Duhoux, P.; Argomedo, J.; Gallieni, D.; Lazzarini, P.; Biasi, R.; Andrighettoni, M.; Angerer, G.; Pescoller, D.; Stuik, R.,; Deep, A.

    2010-07-01

    The ESO Adaptive Optics Facility (AOF) consists in an evolution of one of the ESO VLT unit telescopes to a laser driven adaptive telescope with a deformable mirror in its optical train, in this case the secondary 1.1m mirror, and four Laser Guide Stars (LGSs). This evolution implements many challenging technologies like the Deformable Secondary Mirror (DSM) including a thin shell mirror (1.1 m diameter and 2mm thin), the high power Na lasers (20W), the low Read-Out Noise (RON) WaveFront Sensor (WFS) camera (< 1e-) and SPARTA the new generation of Real Time Computers (RTC) for adaptive control. It also faces many problematic similar to any Extremely Large Telescope (ELT) and as such, will validate many technologies and solutions needed for the European ELT (E-ELT) 42m telescope. The AOF will offer a very large (7 arcmin) Field Of View (FOV) GLAO correction in J, H and K bands (GRAAL+Hawk-I), a visible integral field spectrograph with a 1 arcmin GLAO corrected FOV (GALACSI-MUSE WFM) and finally a LTAO 7.5" FOV (GALACSI-MUSE NFM). Most systems of the AOF have completed final design and are in manufacturing phase. Specific activities are linked to the modification of the 8m telescope in order to accommodate the new DSM and the 4 LGS Units assembled on its Center-Piece. A one year test period in Europe is planned to test and validate all modes and their performance followed by a commissioning phase in Paranal scheduled for 2014.

  5. Real-time analysis keratometer

    NASA Technical Reports Server (NTRS)

    Adachi, Iwao P. (Inventor); Adachi, Yoshifumi (Inventor); Frazer, Robert E. (Inventor)

    1987-01-01

    A computer assisted keratometer in which a fiducial line pattern reticle illuminated by CW or pulsed laser light is projected on a corneal surface through lenses, a prismoidal beamsplitter quarterwave plate, and objective optics. The reticle surface is curved as a conjugate of an ideal corneal curvature. The fiducial image reflected from the cornea undergoes a polarization shift through the quarterwave plate and beamsplitter whereby the projected and reflected beams are separated and directed orthogonally. The reflected beam fiducial pattern forms a moire pattern with a replica of the first recticle. This moire pattern contains transverse aberration due to differences in curvature between the cornea and the ideal corneal curvature. The moire pattern is analyzed in real time by computer which displays either the CW moire pattern or a pulsed mode analysis of the transverse aberration of the cornea under observation, in real time. With the eye focused on a plurality of fixation points in succession, a survey of the entire corneal topography is made and a contour map or three dimensional plot of the cornea can be made as a computer readout in addition to corneal radius and refractive power analysis.

  6. Real time polarimetric dehazing.

    PubMed

    Mudge, Jason; Virgen, Miguel

    2013-03-20

    Remote sensing is a rich topic due to its utility in gathering detailed accurate information from locations that are not economically feasible traveling destinations or are physically inaccessible. However, poor visibility over long path lengths is problematic for a variety of reasons. Haze induced by light scatter is one cause for poor visibility and is the focus of this article. Image haze comes about as a result of light scattering off particles and into the imaging path causing a haziness to appear on the image. Image processing using polarimetric information of light scatter can be used to mitigate image haze. An imaging polarimeter which provides the Stokes values in real time combined with a "dehazing" algorithm can automate image haze removal for instant applications. Example uses are to improve visual display providing on-the-spot detection or imbedding in an active control loop to improve viewing and tracking while on a moving platform. In addition, removing haze in this manner allows the trade space for a system operational waveband to be opened up to bands which are object matched and not necessarily restricted by scatter effects. PMID:23518739

  7. A Physics-Based Modeling and Real-Time Simulation of Biomechanical Diffusion Process Through Optical Imaged Alveolar Tissues on Graphical Processing Units

    NASA Astrophysics Data System (ADS)

    Kaya, Ilhan; Santhanam, Anand P.; Lee, Kye-Sung; Meemon, Panomsak; Papp, Nicolene; Rolland, Jannick P.

    Tissue engineering has broad applications from creating the much-needed engineered tissue and organ structures for regenerative medicine to providing in vitro testbeds for drug testing. In the latter, application domain, creating alveolar lung tissue, and simulating the diffusion process of oxygen and other possible agents from the air into the blood stream as well as modeling the removal of carbon dioxide and other possible entities from the blood stream are of critical importance to simulating lung functions in various environments. In this chapter, we propose a physics-based model to simulate the alveolar gas exchange and the alveolar diffusionDiffusion alveolar process. Tissue engineers, for the first time, may utilize these simulation results to better understand the underlying gas exchange process and properly adjust the tissue growing cycles. In this work, alveolar tissues are imaged by means of an optical coherence microscopyOptical coherence microscopy (OCM Modality OCM ) system developed in our laboratory. As a consequence, 3D alveoli tissue data with its inherent complex boundary is taken as input to the simulationSimulation diffusion system, which is based on computational fluid mechanics in simulating the alveolar gas exchange. The visualizationVisualization and the simulation of diffusion of the air into the blood through the alveoli tissue is performed using a state-of-art graphics processing unitGraphics processing unit (GPU). Results show the real-time simulation of the gas exchange through the 2D alveoli tissue.

  8. Adsorption calorimetry during metal vapor deposition on single crystal surfaces: Increased flux, reduced optical radiation, and real-time flux and reflectivity measurements

    SciTech Connect

    Sellers, Jason R. V.; James, Trevor E.; Hemmingson, Stephanie L.; Farmer, Jason A.; Campbell, Charles T.

    2013-12-15

    Thin films of metals and other materials are often grown by physical vapor deposition. To understand such processes, it is desirable to measure the adsorption energy of the deposited species as the film grows, especially when grown on single crystal substrates where the structure of the adsorbed species, evolving interface, and thin film are more homogeneous and well-defined in structure. Our group previously described in this journal an adsorption calorimeter capable of such measurements on single-crystal surfaces under the clean conditions of ultrahigh vacuum [J. T. Stuckless, N. A. Frei, and C. T. Campbell, Rev. Sci. Instrum. 69, 2427 (1998)]. Here we describe several improvements to that original design that allow for heat measurements with ∼18-fold smaller standard deviation, greater absolute accuracy in energy calibration, and, most importantly, measurements of the adsorption of lower vapor-pressure materials which would have previously been impossible. These improvements are accomplished by: (1) using an electron beam evaporator instead of a Knudsen cell to generate the metal vapor at the source of the pulsed atomic beam, (2) changing the atomic beam design to decrease the relative amount of optical radiation that accompanies evaporation, (3) adding an off-axis quartz crystal microbalance for real-time measurement of the flux of the atomic beam during calorimetry experiments, and (4) adding capabilities for in situ relative diffuse optical reflectivity determinations (necessary for heat signal calibration). These improvements are not limited to adsorption calorimetry during metal deposition, but also could be applied to better study film growth of other elements and even molecular adsorbates.

  9. Near-Real-Time Monitoring and Reporting of Crop Growth Condition and Harvest Status Using an Integrated Optical and Radar Approach at the National-Scale in Canada

    NASA Astrophysics Data System (ADS)

    Shang, J.

    2015-12-01

    There has been an increasing need to have accurate and spatially detailed information on crop growth condition and harvest status over Canada's agricultural land so that the impacts of environmental conditions, market supply and demand, and transportation network limitations on crop production can be understood fully and acted upon in a timely manner. Presently, Canada doesn't have a national dataset that can provide near-real-time geospatial information on crop growth stage and harvest systematically so that reporting on risk events can be linked directly to the grain supply chain and crop production fluctuations. The intent of this study is to develop an integrated approach using Earth observation (EO) technology to provide a consistent, comprehensive picture of crop growth cycles (growth conditions and stages) and agricultural management activities (field preparation for seeding, harvest, and residue management). Integration of the optical and microwave satellite remote sensing technologies is imperative for robust methodology development and eventually for operational implementation. Particularly, the current synthetic aperture radar (SAR) system Radarsat-2 and to be launched Radarsat Constellation Mission (RCM) are unique EO resources to Canada. Incorporating these Canadian SAR resources with international SAR missions such as the Cosmesky-Med and TerraSAR, could be of great potential for developing change detection technologies particularly useful for monitoring harvest as well as other types of agricultural management events. The study revealed that radar and multi-scale (30m and 250m) optical satellite data can directly detect or infer 1) seeding date, 2) crop growth stages and gross primary productivity (GPP), and 3) harvest progress. Operational prototypes for providing growing-season information at the crop-specific level will be developed across the Canadian agricultural land base.

  10. Experimental demonstrations of record high REAM intensity modulator-enabled 19.25Gb/s real-time end-to-end dual-band optical OFDM colorless transmissions over 25km SSMF IMDD systems.

    PubMed

    Zhang, Q W; Hugues-Salas, E; Giddings, R P; Wang, M; Tang, J M

    2013-04-01

    Record-high 19.25Gb/s real-time end-to-end dual-band optical OFDM (OOFDM) colorless transmissions across the entire C-band are experimentally demonstrated, for the first time, in reflective electro-absorption modulator (REAM)-based 25km standard SMF systems using intensity modulation and direct detection. Adaptively modulated baseband (0-2GHz) and passband (6.125 ± 2GHz) OFDM RF sub-bands, supporting signal line rates of 9.75Gb/s and 9.5Gb/s respectively, are independently generated and detected with FPGA-based DSP clocked at only 100MHz as well as DACs/ADCs operating at sampling speeds as low as 4GS/s. The two OFDM sub-bands are electrically multiplexed for intensity modulation of a single optical carrier by an 8GHz REAM. The REAM colorlessness is experimentally characterized, based on which optimum REAM operating conditions are identified. To maximize and balance the signal transmission performance of each sub-band, on-line adaptive transceiver optimization functions and live performance monitoring are fully exploited to optimize key OOFDM transceiver and system parameters. For different wavelengths within the C-band, corresponding minimum received optical powers at the FEC limit vary in a range of <0.5dB and bit error rate performances for both baseband and passband signals are almost identical. Furthermore, detailed investigations are also undertaken of the maximum aggregated signal line rate sensitivity to electrical sub-band power variation. It is shown that the aforementioned system has approximately 3dB tolerance to RF sub-band power variation. PMID:23572005

  11. Adaptive optics projects at ESO

    NASA Astrophysics Data System (ADS)

    Hubin, Norbert N.; Arsenault, Robin; Bonnet, Henri; Conan, Rodolphe; Delabre, Bernard; Donaldson, Robert; Dupuy, Christophe; Fedrigo, Enrico; Ivanescu, L.; Kasper, Markus E.; Kissler-Patig, Markus; Lizon, Jean-Luis; Le Louarn, Miska; Marchetti, Enrico; Paufique, J.; Stroebele, Stefan; Tordo, Sebastien

    2003-02-01

    Over the past two years ESO has reinforced its efforts in the field of Adaptive Optics. The AO team has currently the challenging objectives to provide 8 Adaptive Optics systems for the VLT in the coming years and has now a world-leading role in that field. This paper will review all AO projects and plans. We will present an overview of the Nasmyth Adaptive Optics System (NAOS) with its infrared imager CONICA installed successfully at the VLT last year. Sodium Laser Guide Star plans will be introduced. The status of the 4 curvature AO systems (MACAO) developed for the VLT interferometer will be discussed. The status of the SINFONI AO module developed to feed the infrared integral field spectrograph (SPIFFI) will be presented. A short description of the Multi-conjugate Adaptive optics Demonstrator MAD and its instrumentation will be introduced. Finally, we will present the plans for the VLT second-generation AO systems and the researches performed in the frame of OWL.

  12. Real-Time Keratometer

    NASA Technical Reports Server (NTRS)

    Frazer, Robert E.; Adachi, Iwao P.; Adachi, Yoshifumi

    1988-01-01

    Optical/electronic keratometer system produces contour map of corneal surface illuminated by infrared light pulses. Prevents operator error and eliminates need to apply fluorescent liquids to cornea. Keratometer provides both video display and numerical recording for corneal-transplant and radial-keratotomy surgery and for contact-lens fitting. Optical system of keratometer, circular grating pattern transmitted to corneal surface reflected onto identical circular grating on surface of fiber plate, producing Moire pattern. Data-analysis-and-display mode, laser light pulsed, and Moire pattern converted to digital information in frame grabber. Digital picture information sent to computer for processing and display.

  13. Real-time calibration-free C-scan images of the eye fundus using Master Slave swept source optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Bradu, Adrian; Kapinchev, Konstantin; Barnes, Fred; Garway-Heath, David F.; Rajendram, Ranjan; Keane, Pearce; Podoleanu, Adrian G.

    2015-03-01

    Recently, we introduced a novel Optical Coherence Tomography (OCT) method, termed as Master Slave OCT (MS-OCT), specialized for delivering en-face images. This method uses principles of spectral domain interfereometry in two stages. MS-OCT operates like a time domain OCT, selecting only signals from a chosen depth only while scanning the laser beam across the eye. Time domain OCT allows real time production of an en-face image, although relatively slowly. As a major advance, the Master Slave method allows collection of signals from any number of depths, as required by the user. The tremendous advantage in terms of parallel provision of data from numerous depths could not be fully employed by using multi core processors only. The data processing required to generate images at multiple depths simultaneously is not achievable with commodity multicore processors only. We compare here the major improvement in processing and display, brought about by using graphic cards. We demonstrate images obtained with a swept source at 100 kHz (which determines an acquisition time [Ta] for a frame of 200×200 pixels2 of Ta =1.6 s). By the end of the acquired frame being scanned, using our computing capacity, 4 simultaneous en-face images could be created in T = 0.8 s. We demonstrate that by using graphic cards, 32 en-face images can be displayed in Td 0.3 s. Other faster swept source engines can be used with no difference in terms of Td. With 32 images (or more), volumes can be created for 3D display, using en-face images, as opposed to the current technology where volumes are created using cross section OCT images.

  14. Chemical vapor deposition of anisotropic ultrathin gold films on optical fibers: real-time sensing by tilted fiber Bragg gratings and use of a dielectric pre-coating

    NASA Astrophysics Data System (ADS)

    Mandia, David J.; Zhou, Wenjun; Ward, Matthew J.; Joress, Howie; Giorgi, Javier B.; Gordon, Peter; Albert, Jacques; Barry, Seán. T.

    2014-09-01

    Tilted fiber Bragg gratings (TFBGs) are refractometry-based sensor platforms that have been employed herein as devices for the real-time monitoring of chemical vapour deposition (CVD) in the near-infrared range (NIR). The coreguided light launched within the TFBG core is back-reflected off a gold mirror sputtered onto the fiber-end and is scattered out into the cladding where it can interact with a nucleating thin film. Evanescent fields of the growing gold nanostructures behave differently depending on the polarization state of the core-guided light interrogating the growing film, therefore the resulting spectral profile is typically decomposed into two separate peak families for the orthogonal S- and P-polarizations. Wavelength shifts and attenuation profiles generated from gold films in the thickness regime of 5-100 nm are typically degenerate for deposition directly onto the TFBG. However, a polarization-dependence can be imposed by adding a thin dielectric pre-coating onto the TFBG prior to using the device for CVD monitoring of the ultrathin gold films. It is found that addition of the pre-coating enhances the sensitivity of the P-polarized peak family to the deposition of ultrathin gold films and renders the films optically anisotropic. It is shown herein that addition of the metal oxide coating can increase the peak-to-peak wavelength separation between orthogonal polarization modes as well as allow for easy resonance tracking during deposition. This is also the first reporting of anisotropic gold films generated from this particular gold precursor and CVD process. Using an ensemble of x-ray techniques, the local fine structure of the gold films deposited directly on the TFBG is compared to gold films of similar thicknesses deposited on the Al2O3 pre-coated TFBG and witness slides.

  15. Simultaneous monitoring of biofilm growth, microbial activity, and inorganic deposits on surfaces with an in situ, online, real-time, non-destructive, optical sensor.

    PubMed

    Strathmann, Martin; Mittenzwey, Klaus-Henrik; Sinn, Gert; Papadakis, Wassilios; Flemming, Hans-Curt

    2013-01-01

    Deposits on surfaces in water-bearing systems, also known as 'fouling', can lead to substantial losses in the performance of industrial processes as well as a decreased product quality. Early detection and localization of such deposits can, to a considerable extent, save such losses. However, most of the surfaces that become fouled, for example, in process water pipes, membrane systems, power plants, and food and beverage industries, are difficult to access and analyses conducted on the water phase do not reveal the site or extent of deposits. Furthermore, it is of interest to distinguish biological from non-biological deposits. Although they usually occur together, different countermeasures are necessary. Therefore, sensors are required that indicate the development of surface fouling in real-time, non-destructively, and in situ, preferably allowing for discrimination between chemical and/or biological deposits. In this paper, an optical deposit sensor is presented which fulfills these requirements. Based on multiple fluorescence excitation emission matrix analysis, it detects autofluorescence of amino acids as indicators of biomass. Autofluorescence of nicotinamide adenine dinucleotide + hydrogen is interpreted as an indicator of biological activity, thus it acts as a viability marker, making the method suited for assessing the efficacy of disinfection treatments. Scattering signals from abiotic deposits such as calcium carbonate or corrosion products can clearly be distinguished from biotic substances and monitored separately. The sensor provides an early warning of fouling, allowing for timely countermeasures to be deployed. It also provides an assessment of the success of cleaning treatments and is a promising tool for integrated antifouling strategies. PMID:23682638

  16. Task 1.12 - Solid-Phase Microextraction (SPME) coupled with optical spectroscopy for near-real-time determination of fuel and related pollutants in water samples

    SciTech Connect

    1995-02-01

    Measurement of organic water pollutants requires that samples be collected, transported, extracted (usually with large volumes of chlorinated solvents), and analyzed using chromatographic techniques. Such limitations make rapid determinations in the field very expensive, with analytical turnaround times of several days. Similar limitations exist for the analysis of organic air pollutants. An alternative approach is being developed that has been demonstrated to yield good sensitivities (ppb to ppm) and to achieve rapid (< 30 minutes) and inexpensive field surveys. This approach is based on the preconcentration of organic pollutants in optically clear sorbent media followed by measurement with either ultraviolet (UV) spectroscopy or Fourier transform infrared spectrometry (FT-IR). Investigations using sorbent media including methylsilicone gums (for UV spectroscopy) and Parafilm (for FT-IR) have shown that quantitative determinations of aromatic fuel components, such as benzene and alkylbenzenes, can be achieved using UV spectrometry, and of common solvents can be achieved using FT-IR. Sample concentration and spectroscopic steps can be performed in a few minutes using the combination of solid-phase sorption followed by spectroscopic measurements. This work has demonstrated that the approach can yield low-ppm to low-ppb detection limits for organic pollutants in water without the negative influences of water matrix components (e.g., dissolved humic material) that prohibit the use of direct spectroscopic measurements. A good potential for real-time air monitoring of organic pollutants also exists. Additional advantages of the technique are that no organic solvents are used and that a simple, very inexpensive dipstick device can be used with conventional (and portable) spectroscopic instrumentation. The results demonstrated that the method can be used as a solvent-free and rapid survey method in the lab or the field. 1 fig., 1 tab.

  17. Real-Time Confocal Imaging Of The Living Eye

    NASA Astrophysics Data System (ADS)

    Jester, James V.; Cavanagh, H. Dwight; Essepian, John; Shields, William J.; Lemp, Michael A.

    1989-12-01

    In 1986, we adapted the Tandem Scanning Reflected Light Microscope of Petran and Hadraysky to permit non-invasive, confocal imaging of the living eye in real-time. We were first to obtain stable, confocal optical sections in vivo, from human and animal eyes. Using confocal imaging systems we have now studied living, normal volunteers, rabbits, cats and primates sequentially, non-invasively, and in real-time. The continued development of real-time confocal imaging systems will unlock the door to a new field of cell biology involving for the first time the study of dynamic cellular processes in living organ systems. Towards this end we have concentrated our initial studies on three areas (1) evaluation of confocal microscope systems for real-time image acquisition, (2) studies of the living normal cornea (epithelium, stroma, endothelium) in human and other species; and (3) sequential wound-healing responses in the cornea in single animals to lamellar-keratectomy injury (cellular migration, inflammation, scarring). We believe that this instrument represents an important, new paradigm for research in cell biology and pathology and that it will fundamentally alter all experimental and clinical approaches in future years.

  18. Intelligent Optical Systems Using Adaptive Optics

    NASA Technical Reports Server (NTRS)

    Clark, Natalie

    2012-01-01

    Until recently, the phrase adaptive optics generally conjured images of large deformable mirrors being integrated into telescopes to compensate for atmospheric turbulence. However, the development of smaller, cheaper devices has sparked interest for other aerospace and commercial applications. Variable focal length lenses, liquid crystal spatial light modulators, tunable filters, phase compensators, polarization compensation, and deformable mirrors are becoming increasingly useful for other imaging applications including guidance navigation and control (GNC), coronagraphs, foveated imaging, situational awareness, autonomous rendezvous and docking, non-mechanical zoom, phase diversity, and enhanced multi-spectral imaging. The active components presented here allow flexibility in the optical design, increasing performance. In addition, the intelligent optical systems presented offer advantages in size and weight and radiation tolerance.

  19. Towards real time speckle controlled retinal photocoagulation

    NASA Astrophysics Data System (ADS)

    Bliedtner, Katharina; Seifert, Eric; Stockmann, Leoni; Effe, Lisa; Brinkmann, Ralf

    2016-03-01

    Photocoagulation is a laser treatment widely used for the therapy of several retinal diseases. Intra- and inter-individual variations of the ocular transmission, light scattering and the retinal absorption makes it impossible to achieve a uniform effective exposure and hence a uniform damage throughout the therapy. A real-time monitoring and control of the induced damage is highly requested. Here, an approach to realize a real time optical feedback using dynamic speckle analysis is presented. A 532 nm continuous wave Nd:YAG laser is used for coagulation. During coagulation, speckle dynamics are monitored by a coherent object illumination using a 633nm HeNe laser and analyzed by a CMOS camera with a frame rate up to 1 kHz. It is obvious that a control system needs to determine whether the desired damage is achieved to shut down the system in a fraction of the exposure time. Here we use a fast and simple adaption of the generalized difference algorithm to analyze the speckle movements. This algorithm runs on a FPGA and is able to calculate a feedback value which is correlated to the thermal and coagulation induced tissue motion and thus the achieved damage. For different spot sizes (50-200 μm) and different exposure times (50-500 ms) the algorithm shows the ability to discriminate between different categories of retinal pigment epithelial damage ex-vivo in enucleated porcine eyes. Furthermore in-vivo experiments in rabbits show the ability of the system to determine tissue changes in living tissue during coagulation.

  20. Interferometer real time control development for SIM

    NASA Astrophysics Data System (ADS)

    Bell, Charles E.

    2003-02-01

    Real Time Control (RTC) for the Space Interferometry Mission will build on the real time core interferometer control technology under development at JPL since the mid 1990s, with heritage from the ground based MKII and Palomar Testbed Interferometer projects developed in the late '80s and early '90s. The core software and electronics technology for SIM interferometer real time control is successfully operating on several SIM technology demonstration testbeds, including the Real-time Interferometer Control System Testbed, System Testbed-3, and the Microarcsecond Metrology testbed. This paper provides an overview of the architecture, design, integration, and test of the SIM flight interferometer real time control to meet challenging flight system requirements for the high processor throughput, low-latency interconnect, and precise synchronization to support microarcsecond-level astrometric measurements for greater than five years at 1 AU in Earth-trailing orbit. The electronics and software architecture of the interferometer real time control core and its adaptation to a flight design concept are described. Control loops for pointing and pathlength control within each of four flight interferometers and for coordination of control and data across interferometers are illustrated. The nature of onboard data processing to fit average downlink rates while retaining post-processed astrometric measurement precision and accuracy is also addressed. Interferometer flight software will be developed using a software simulation environment incorporating models of the metrology and starlight sensors and actuators to close the real time control loops. RTC flight software and instrument flight electronics will in turn be integrated utilizing the same simulation architecture for metrology and starlight component models to close real time control loops and verify RTC functionality and performance prior to delivery to flight interferometer system integration at Lockheed Martin

  1. Smart adaptive optic systems using spatial light modulators.

    PubMed

    Clark, N; Banish, M; Ranganath, H S

    1999-01-01

    Many factors contribute to the aberrations induced in an optical system. Atmospheric turbulence between the object and the imaging system, physical or thermal perturbations in optical elements degrade the system's point spread function, and misaligned optics are the primary sources of aberrations that affect image quality. The design of a nonconventional real-time adaptive optic system using a micro-mirror device for wavefront correction is presented. The unconventional compensated imaging system presented offers advantages in speed, cost, power consumption, and weight. A pulsed-coupled neural network is used to as a preprocessor to enhance the performance of the wavefront sensor for low-light applications. Modeling results that characterize the system performance are presented. PMID:18252558

  2. Adaptive optics system for the IRSOL solar observatory

    NASA Astrophysics Data System (ADS)

    Ramelli, Renzo; Bucher, Roberto; Rossini, Leopoldo; Bianda, Michele; Balemi, Silvano

    2010-07-01

    We present a low cost adaptive optics system developed for the solar observatory at Istituto Ricerche Solari Locarno (IRSOL), Switzerland. The Shack-Hartmann Wavefront Sensor is based on a Dalsa CCD camera with 256 pixels × 256 pixels working at 1kHz. The wavefront compensation is obtained by a deformable mirror with 37 actuators and a Tip-Tilt mirror. A real time control software has been developed on a RTAI-Linux PC. Scicos/Scilab based software has been realized for an online analysis of the system behavior. The software is completely open source.

  3. A simplified adaptive optics system

    NASA Astrophysics Data System (ADS)

    Ivanescu, Liviu; Racine, René; Nadeau, Daniel

    2003-02-01

    Affordable adaptive optics on small telescopes allow to introduce the technology to a large community and provide opportunities to train new specialists in the field. We have developed a low order, low cost adaptive optics system for the 1.6m telescope of the Mont Megantic Observatory. The system corrects tip-tilt, focus, astigmatisms and one trefoil term. It explores a number of new approaches. The sensor receives a single out-of-focus image of the reference star. The central obstruction of the telescope can free the focus detection from the effect of seeing and allows a very small defocus. The deformable mirror is profiled so as to preserve a parabolic shape under pressure from actuators located at its edge. A separate piezoelectric platform drives the tilt mirror.

  4. Real-Time Observation of Antimicrobial Polycation Effects on Escherichia coli: Adapting the Carpet Model for Membrane Disruption to Quaternary Copolyoxetanes.

    PubMed

    Wang, Congzhou; Zolotarskaya, Olga Y; Nair, Sithara S; Ehrhardt, Christopher J; Ohman, Dennis E; Wynne, Kenneth J; Yadavalli, Vamsi K

    2016-03-29

    Real-time atomic force microscopy (AFM) was used for analyzing effects of the antimicrobial polycation copolyoxetane P[(C12)-(ME2Ox)-50/50], C12-50 on the membrane of a model bacterium, Escherichia coli (ATCC# 35218). AFM imaging showed cell membrane changes with increasing C12-50 concentration and time including nanopore formation and bulges associated with outer bacterial membrane disruption. A macroscale bactericidal concentration study for C12-50 showed a 4 log kill at 15 μg/mL with conditions paralleling imaging (1 h, 1x PBS, physiological pH, 25 °C). The dramatic changes from the control image to 1 h after introducing 15 μg/mL C12-50 are therefore reasonably attributed to cell death. At the highest concentration (60 μg/mL) further cell membrane disruption results in leakage of cytoplasm driven by detergent-like action. The sequence of processes for initial membrane disruption by the synthetic polycation C12-50 follows the carpet model posited for antimicrobial peptides (AMPs). However, the nanoscale details are distinctly different as C12-50 is a synthetic, water-soluble copolycation that is best modeled as a random coil. In a complementary AFM study, chemical force microscopy shows that incubating cells with C12-50 decreased the hydrophobicity across the entire cell surface at an early stage. This finding provides additional evidence indicating that C12-50 polycations initially bind with the cell membrane in a carpet-like fashion. Taken together, real time AFM imaging elucidates the mechanism of antimicrobial action for copolyoxetane C12-50 at the single cell level. In future work this approach will provide important insights into structure-property relationships and improved antimicrobial effectiveness for synthetic amphiphilic polycations. PMID:26948099

  5. In vivo imaging of human photoreceptor mosaic with wavefront sensorless adaptive optics optical coherence tomography.

    PubMed

    Wong, Kevin S K; Jian, Yifan; Cua, Michelle; Bonora, Stefano; Zawadzki, Robert J; Sarunic, Marinko V

    2015-02-01

    Wavefront sensorless adaptive optics optical coherence tomography (WSAO-OCT) is a novel imaging technique for in vivo high-resolution depth-resolved imaging that mitigates some of the challenges encountered with the use of sensor-based adaptive optics designs. This technique replaces the Hartmann Shack wavefront sensor used to measure aberrations with a depth-resolved image-driven optimization algorithm, with the metric based on the OCT volumes acquired in real-time. The custom-built ultrahigh-speed GPU processing platform and fast modal optimization algorithm presented in this paper was essential in enabling real-time, in vivo imaging of human retinas with wavefront sensorless AO correction. WSAO-OCT is especially advantageous for developing a clinical high-resolution retinal imaging system as it enables the use of a compact, low-cost and robust lens-based adaptive optics design. In this report, we describe our WSAO-OCT system for imaging the human photoreceptor mosaic in vivo. We validated our system performance by imaging the retina at several eccentricities, and demonstrated the improvement in photoreceptor visibility with WSAO compensation. PMID:25780747

  6. In vivo imaging of human photoreceptor mosaic with wavefront sensorless adaptive optics optical coherence tomography

    PubMed Central

    Wong, Kevin S. K.; Jian, Yifan; Cua, Michelle; Bonora, Stefano; Zawadzki, Robert J.; Sarunic, Marinko V.

    2015-01-01

    Wavefront sensorless adaptive optics optical coherence tomography (WSAO-OCT) is a novel imaging technique for in vivo high-resolution depth-resolved imaging that mitigates some of the challenges encountered with the use of sensor-based adaptive optics designs. This technique replaces the Hartmann Shack wavefront sensor used to measure aberrations with a depth-resolved image-driven optimization algorithm, with the metric based on the OCT volumes acquired in real-time. The custom-built ultrahigh-speed GPU processing platform and fast modal optimization algorithm presented in this paper was essential in enabling real-time, in vivo imaging of human retinas with wavefront sensorless AO correction. WSAO-OCT is especially advantageous for developing a clinical high-resolution retinal imaging system as it enables the use of a compact, low-cost and robust lens-based adaptive optics design. In this report, we describe our WSAO-OCT system for imaging the human photoreceptor mosaic in vivo. We validated our system performance by imaging the retina at several eccentricities, and demonstrated the improvement in photoreceptor visibility with WSAO compensation. PMID:25780747

  7. Contrast-based sensorless adaptive optics for retinal imaging.

    PubMed

    Zhou, Xiaolin; Bedggood, Phillip; Bui, Bang; Nguyen, Christine T O; He, Zheng; Metha, Andrew

    2015-09-01

    Conventional adaptive optics ophthalmoscopes use wavefront sensing methods to characterize ocular aberrations for real-time correction. However, there are important situations in which the wavefront sensing step is susceptible to difficulties that affect the accuracy of the correction. To circumvent these, wavefront sensorless adaptive optics (or non-wavefront sensing AO; NS-AO) imaging has recently been developed and has been applied to point-scanning based retinal imaging modalities. In this study we show, for the first time, contrast-based NS-AO ophthalmoscopy for full-frame in vivo imaging of human and animal eyes. We suggest a robust image quality metric that could be used for any imaging modality, and test its performance against other metrics using (physical) model eyes. PMID:26417525

  8. Real time computer controlled weld skate

    NASA Technical Reports Server (NTRS)

    Wall, W. A., Jr.

    1977-01-01

    A real time, adaptive control, automatic welding system was developed. This system utilizes the general case geometrical relationships between a weldment and a weld skate to precisely maintain constant weld speed and torch angle along a contoured workplace. The system is compatible with the gas tungsten arc weld process or can be adapted to other weld processes. Heli-arc cutting and machine tool routing operations are possible applications.

  9. Non-destructive optical clearing technique enhances optical coherence tomography (OCT) for real-time, 3D histomorphometry of brain tissue (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Paul, Akshay; Chang, Theodore H.; Chou, Li-Dek; Ramalingam, Tirunelveli S.

    2016-03-01

    Evaluation of neurodegenerative disease often requires examination of brain morphology. Volumetric analysis of brain regions and structures can be used to track developmental changes, progression of disease, and the presence of transgenic phenotypes. Current standards for microscopic investigation of brain morphology are limited to detection of superficial structures at a maximum depth of 300μm. While histological techniques can provide detailed cross-sections of brain structures, they require complicated tissue preparation and the ultimate destruction of the sample. A non-invasive, label-free imaging modality known as Optical Coherence Tomography (OCT) can produce 3-dimensional reconstructions through high-speed, cross-sectional scans of biological tissue. Although OCT allows for the preservation of intact samples, the highly scattering and absorbing properties of biological tissue limit imaging depth to 1-2mm. Optical clearing agents have been utilized to increase imaging depth by index matching and lipid digestion, however, these contemporary techniques are expensive and harsh on tissues, often irreversibly denaturing proteins. Here we present an ideal optical clearing agent that offers ease-of-use and reversibility. Similar to how SeeDB has been effective for microscopy, our fructose-based, reversible optical clearing technique provides improved OCT imaging and functional immunohistochemical mapping of disease. Fructose is a natural, non-toxic sugar with excellent water solubility, capable of increasing tissue transparency and reducing light scattering. We will demonstrate the improved depth-resolving performance of OCT for enhanced whole-brain imaging of normal and diseased murine brains following a fructose clearing treatment. This technique potentially enables rapid, 3-dimensional evaluation of biological tissues at axial and lateral resolutions comparable to histopathology.

  10. Real-Time Benchmark Suite

    1992-01-17

    This software provides a portable benchmark suite for real time kernels. It tests the performance of many of the system calls, as well as the interrupt response time and task response time to interrupts. These numbers provide a baseline for comparing various real-time kernels and hardware platforms.

  11. An Accurate, Flexible and Small Optical Fiber Sensor: A Novel Technological Breakthrough for Real-Time Analysis of Dynamic Blood Flow Data In Vivo

    PubMed Central

    Yuan, Qiao-ying; Zhang, Ling; Xiao, Dan; Zhao, Kun; Lin, Chun; Si, Liang-yi

    2014-01-01

    Because of the limitations of existing methods and techniques for directly obtaining real-time blood data, no accurate microflow in vivo real-time analysis method exists. To establish a novel technical platform for real-time in vivo detection and to analyze average blood pressure and other blood flow parameters, a small, accurate, flexible, and nontoxic Fabry-Perot fiber sensor was designed. The carotid sheath was implanted through intubation of the rabbit carotid artery (n = 8), and the blood pressure and other detection data were determined directly through the veins. The fiber detection results were compared with test results obtained using color Doppler ultrasound and a physiological pressure sensor recorder. Pairwise comparisons among the blood pressure results obtained using the three methods indicated that real-time blood pressure information obtained through the fiber sensor technique exhibited better correlation than the data obtained with the other techniques. The highest correlation (correlation coefficient of 0.86) was obtained between the fiber sensor and pressure sensor. The blood pressure values were positively related to the total cholesterol level, low-density lipoprotein level, number of red blood cells, and hemoglobin level, with correlation coefficients of 0.033, 0.129, 0.358, and 0.373, respectively. The blood pressure values had no obvious relationship with the number of white blood cells and high-density lipoprotein and had a negative relationship with triglyceride levels, with a correlation coefficient of –0.031. The average ambulatory blood pressure measured by the fiber sensor exhibited a negative correlation with the quantity of blood platelets (correlation coefficient of −0.839, P<0.05). The novel fiber sensor can thus obtain in vivo blood pressure data accurately, stably, and in real time; the sensor can also determine the content and status of the blood flow to some extent. Therefore, the fiber sensor can obtain partially real-time

  12. Real-time monitoring system for microfluidics

    NASA Astrophysics Data System (ADS)

    Sapuppo, F.; Cantelli, G.; Fortuna, L.; Arena, P.; Bucolo, M.

    2007-05-01

    A new non-invasive real-time system for the monitoring and control of microfluidodynamic phenomena is proposed. The general purpose design of such system is suitable for in vitro and in vivo experimental setup and therefore for microfluidic application in the biomedical field such as lab-on-chip and for research studies in the field of microcirculation. The system consists of an ad hoc optical setup for image magnification providing images suitable for image acquisition and processing. The optic system was designed and developed using discrete opto-mechanic components mounted on a breadboard in order to provide an optic path accessible at any point where the information needs to be acquired. The optic sensing, acquisition, and processing were performed using an integrated vision system based on the Cellular Nonlinear Networks (CNNs) analogic technology called Focal Plane Processor (FPP, Eye-RIS, Anafocus) and inserted in the optic path. Ad hoc algorithms were implemented for the real-time analysis and extraction of fluido-dynamic parameters in micro-channels. They were tested on images recorded during in vivo microcirculation experiments on hamsters and then they were applied on images optically acquired and processed in real-time during in vitro experiments on a continuous microfluidic device (serpentine mixer, ThinXXS) with a two-phase fluid.

  13. Real-time flutter identification

    NASA Technical Reports Server (NTRS)

    Roy, R.; Walker, R.

    1985-01-01

    The techniques and a FORTRAN 77 MOdal Parameter IDentification (MOPID) computer program developed for identification of the frequencies and damping ratios of multiple flutter modes in real time are documented. Physically meaningful model parameterization was combined with state of the art recursive identification techniques and applied to the problem of real time flutter mode monitoring. The performance of the algorithm in terms of convergence speed and parameter estimation error is demonstrated for several simulated data cases, and the results of actual flight data analysis from two different vehicles are presented. It is indicated that the algorithm is capable of real time monitoring of aircraft flutter characteristics with a high degree of reliability.

  14. Advancing High Contrast Adaptive Optics

    NASA Astrophysics Data System (ADS)

    Ammons, M.; Poyneer, L.; GPI Team

    2014-09-01

    A long-standing challenge has been to directly image faint extrasolar planets adjacent to their host suns, which may be ~1-10 million times brighter than the planet. Several extreme AO systems designed for high-contrast observations have been tested at this point, including SPHERE, Magellan AO, PALM-3000, Project 1640, NICI, and the Gemini Planet Imager (GPI, Macintosh et al. 2014). The GPI is the world's most advanced high-contrast adaptive optics system on an 8-meter telescope for detecting and characterizing planets outside of our solar system. GPI will detect a previously unstudied population of young analogs to the giant planets of our solar system and help determine how planetary systems form. GPI employs a 44x44 woofer-tweeter adaptive optics system with a Shack-Hartmann wavefront sensor operating at 1 kHz. The controller uses Fourier-based reconstruction and modal gains optimized from system telemetry (Poyneer et al. 2005, 2007). GPI has an apodized Lyot coronal graph to suppress diffraction and a near-infrared integral field spectrograph for obtaining planetary spectra. This paper discusses current performance limitations and presents the necessary instrumental modifications and sensitivity calculations for scenarios related to high-contrast observations of non-sidereal targets.

  15. Real-time software receiver

    NASA Technical Reports Server (NTRS)

    Ledvina, Brent M. (Inventor); Psiaki, Mark L. (Inventor); Powell, Steven P. (Inventor); Kintner, Jr., Paul M. (Inventor)

    2007-01-01

    A real-time software receiver that executes on a general purpose processor. The software receiver includes data acquisition and correlator modules that perform, in place of hardware correlation, baseband mixing and PRN code correlation using bit-wise parallelism.

  16. Real-time refinery optimization

    SciTech Connect

    Kennedy, J.P.

    1989-05-01

    This article discusses refinery operation with specific consideration of the topics of: gasoline; control projects; catalytic reforming control; hydrocracker control packages; blending optimization; real-time data acquisition; and other plant automation packages.

  17. Real-time software receiver

    NASA Technical Reports Server (NTRS)

    Ledvina, Brent M. (Inventor); Psiaki, Mark L. (Inventor); Powell, Steven P. (Inventor); Kintner, Jr., Paul M. (Inventor)

    2006-01-01

    A real-time software receiver that executes on a general purpose processor. The software receiver includes data acquisition and correlator modules that perform, in place of hardware correlation, baseband mixing and PRN code correlation using bit-wise parallelism.

  18. Real Time Data System (RTDS)

    NASA Technical Reports Server (NTRS)

    Muratore, John F.

    1991-01-01

    Lessons learned from operational real time expert systems are examined. The basic system architecture is discussed. An expert system is any software that performs tasks to a standard that would normally require a human expert. An expert system implies knowledge contained in data rather than code. And an expert system implies the use of heuristics as well as algorithms. The 15 top lessons learned by the operation of a real time data system are presented.

  19. Real-time vision systems

    SciTech Connect

    Johnson, R.; Hernandez, J.E.; Lu, Shin-yee

    1994-11-15

    Many industrial and defence applications require an ability to make instantaneous decisions based on sensor input of a time varying process. Such systems are referred to as `real-time systems` because they process and act on data as it occurs in time. When a vision sensor is used in a real-time system, the processing demands can be quite substantial, with typical data rates of 10-20 million samples per second. A real-time Machine Vision Laboratory (MVL) was established in FY94 to extend our years of experience in developing computer vision algorithms to include the development and implementation of real-time vision systems. The laboratory is equipped with a variety of hardware components, including Datacube image acquisition and processing boards, a Sun workstation, and several different types of CCD cameras, including monochrome and color area cameras and analog and digital line-scan cameras. The equipment is reconfigurable for prototyping different applications. This facility has been used to support several programs at LLNL, including O Division`s Peacemaker and Deadeye Projects as well as the CRADA with the U.S. Textile Industry, CAFE (Computer Aided Fabric Inspection). To date, we have successfully demonstrated several real-time applications: bullet tracking, stereo tracking and ranging, and web inspection. This work has been documented in the ongoing development of a real-time software library.

  20. Solar adaptive optics with the DKIST: status report

    NASA Astrophysics Data System (ADS)

    Johnson, Luke C.; Cummings, Keith; Drobilek, Mark; Gregory, Scott; Hegwer, Steve; Johansson, Erik; Marino, Jose; Richards, Kit; Rimmele, Thomas; Sekulic, Predrag; Wöger, Friedrich

    2014-08-01

    The DKIST wavefront correction system will be an integral part of the telescope, providing active alignment control, wavefront correction, and jitter compensation to all DKIST instruments. The wavefront correction system will operate in four observing modes, diffraction-limited, seeing-limited on-disk, seeing-limited coronal, and limb occulting with image stabilization. Wavefront correction for DKIST includes two major components: active optics to correct low-order wavefront and alignment errors, and adaptive optics to correct wavefront errors and high-frequency jitter caused by atmospheric turbulence. The adaptive optics system is built around a fast tip-tilt mirror and a 1600 actuator deformable mirror, both of which are controlled by an FPGA-based real-time system running at 2 kHz. It is designed to achieve on-axis Strehl of 0.3 at 500 nm in median seeing (r0 = 7 cm) and Strehl of 0.6 at 630 nm in excellent seeing (r0 = 20 cm). We present the current status of the DKIST high-order adaptive optics, focusing on system design, hardware procurements, and error budget management.