Science.gov

Sample records for adaptive regression spline

  1. G/SPLINES: A hybrid of Friedman's Multivariate Adaptive Regression Splines (MARS) algorithm with Holland's genetic algorithm

    NASA Technical Reports Server (NTRS)

    Rogers, David

    1991-01-01

    G/SPLINES are a hybrid of Friedman's Multivariable Adaptive Regression Splines (MARS) algorithm with Holland's Genetic Algorithm. In this hybrid, the incremental search is replaced by a genetic search. The G/SPLINE algorithm exhibits performance comparable to that of the MARS algorithm, requires fewer least squares computations, and allows significantly larger problems to be considered.

  2. Prediction of longitudinal dispersion coefficient using multivariate adaptive regression splines

    NASA Astrophysics Data System (ADS)

    Haghiabi, Amir Hamzeh

    2016-07-01

    In this paper, multivariate adaptive regression splines (MARS) was developed as a novel soft-computing technique for predicting longitudinal dispersion coefficient (D L ) in rivers. As mentioned in the literature, experimental dataset related to D L was collected and used for preparing MARS model. Results of MARS model were compared with multi-layer neural network model and empirical formulas. To define the most effective parameters on D L , the Gamma test was used. Performance of MARS model was assessed by calculation of standard error indices. Error indices showed that MARS model has suitable performance and is more accurate compared to multi-layer neural network model and empirical formulas. Results of the Gamma test and MARS model showed that flow depth (H) and ratio of the mean velocity to shear velocity (u/u ∗) were the most effective parameters on the D L .

  3. Prediction of longitudinal dispersion coefficient using multivariate adaptive regression splines

    NASA Astrophysics Data System (ADS)

    Haghiabi, Amir Hamzeh

    2016-07-01

    In this paper, multivariate adaptive regression splines (MARS) was developed as a novel soft-computing technique for predicting longitudinal dispersion coefficient ( D L ) in rivers. As mentioned in the literature, experimental dataset related to D L was collected and used for preparing MARS model. Results of MARS model were compared with multi-layer neural network model and empirical formulas. To define the most effective parameters on D L , the Gamma test was used. Performance of MARS model was assessed by calculation of standard error indices. Error indices showed that MARS model has suitable performance and is more accurate compared to multi-layer neural network model and empirical formulas. Results of the Gamma test and MARS model showed that flow depth ( H) and ratio of the mean velocity to shear velocity ( u/ u ∗) were the most effective parameters on the D L .

  4. Multivariate adaptive regression splines models for the prediction of energy expenditure in children and adolescents

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Advanced mathematical models have the potential to capture the complex metabolic and physiological processes that result in heat production, or energy expenditure (EE). Multivariate adaptive regression splines (MARS), is a nonparametric method that estimates complex nonlinear relationships by a seri...

  5. Stock price forecasting for companies listed on Tehran stock exchange using multivariate adaptive regression splines model and semi-parametric splines technique

    NASA Astrophysics Data System (ADS)

    Rounaghi, Mohammad Mahdi; Abbaszadeh, Mohammad Reza; Arashi, Mohammad

    2015-11-01

    One of the most important topics of interest to investors is stock price changes. Investors whose goals are long term are sensitive to stock price and its changes and react to them. In this regard, we used multivariate adaptive regression splines (MARS) model and semi-parametric splines technique for predicting stock price in this study. The MARS model as a nonparametric method is an adaptive method for regression and it fits for problems with high dimensions and several variables. semi-parametric splines technique was used in this study. Smoothing splines is a nonparametric regression method. In this study, we used 40 variables (30 accounting variables and 10 economic variables) for predicting stock price using the MARS model and using semi-parametric splines technique. After investigating the models, we select 4 accounting variables (book value per share, predicted earnings per share, P/E ratio and risk) as influencing variables on predicting stock price using the MARS model. After fitting the semi-parametric splines technique, only 4 accounting variables (dividends, net EPS, EPS Forecast and P/E Ratio) were selected as variables effective in forecasting stock prices.

  6. PM10 modeling in the Oviedo urban area (Northern Spain) by using multivariate adaptive regression splines

    NASA Astrophysics Data System (ADS)

    Nieto, Paulino José García; Antón, Juan Carlos Álvarez; Vilán, José Antonio Vilán; García-Gonzalo, Esperanza

    2014-10-01

    The aim of this research work is to build a regression model of the particulate matter up to 10 micrometers in size (PM10) by using the multivariate adaptive regression splines (MARS) technique in the Oviedo urban area (Northern Spain) at local scale. This research work explores the use of a nonparametric regression algorithm known as multivariate adaptive regression splines (MARS) which has the ability to approximate the relationship between the inputs and outputs, and express the relationship mathematically. In this sense, hazardous air pollutants or toxic air contaminants refer to any substance that may cause or contribute to an increase in mortality or serious illness, or that may pose a present or potential hazard to human health. To accomplish the objective of this study, the experimental dataset of nitrogen oxides (NOx), carbon monoxide (CO), sulfur dioxide (SO2), ozone (O3) and dust (PM10) were collected over 3 years (2006-2008) and they are used to create a highly nonlinear model of the PM10 in the Oviedo urban nucleus (Northern Spain) based on the MARS technique. One main objective of this model is to obtain a preliminary estimate of the dependence between PM10 pollutant in the Oviedo urban area at local scale. A second aim is to determine the factors with the greatest bearing on air quality with a view to proposing health and lifestyle improvements. The United States National Ambient Air Quality Standards (NAAQS) establishes the limit values of the main pollutants in the atmosphere in order to ensure the health of healthy people. Firstly, this MARS regression model captures the main perception of statistical learning theory in order to obtain a good prediction of the dependence among the main pollutants in the Oviedo urban area. Secondly, the main advantages of MARS are its capacity to produce simple, easy-to-interpret models, its ability to estimate the contributions of the input variables, and its computational efficiency. Finally, on the basis of

  7. An Implementation of Bayesian Adaptive Regression Splines (BARS) in C with S and R Wrappers.

    PubMed

    Wallstrom, Garrick; Liebner, Jeffrey; Kass, Robert E

    2008-06-01

    BARS (DiMatteo, Genovese, and Kass 2001) uses the powerful reversible-jump MCMC engine to perform spline-based generalized nonparametric regression. It has been shown to work well in terms of having small mean-squared error in many examples (smaller than known competitors), as well as producing visually-appealing fits that are smooth (filtering out high-frequency noise) while adapting to sudden changes (retaining high-frequency signal). However, BARS is computationally intensive. The original implementation in S was too slow to be practical in certain situations, and was found to handle some data sets incorrectly. We have implemented BARS in C for the normal and Poisson cases, the latter being important in neurophysiological and other point-process applications. The C implementation includes all needed subroutines for fitting Poisson regression, manipulating B-splines (using code created by Bates and Venables), and finding starting values for Poisson regression (using code for density estimation created by Kooperberg). The code utilizes only freely-available external libraries (LAPACK and BLAS) and is otherwise self-contained. We have also provided wrappers so that BARS can be used easily within S or R. PMID:19777145

  8. Splines for Diffeomorphic Image Regression

    PubMed Central

    Singh, Nikhil; Niethammer, Marc

    2016-01-01

    This paper develops a method for splines on diffeomorphisms for image regression. In contrast to previously proposed methods to capture image changes over time, such as geodesic regression, the method can capture more complex spatio-temporal deformations. In particular, it is a first step towards capturing periodic motions for example of the heart or the lung. Starting from a variational formulation of splines the proposed approach allows for the use of temporal control points to control spline behavior. This necessitates the development of a shooting formulation for splines. Experimental results are shown for synthetic and real data. The performance of the method is compared to geodesic regression. PMID:25485370

  9. Air quality modeling in the Oviedo urban area (NW Spain) by using multivariate adaptive regression splines.

    PubMed

    Nieto, P J García; Antón, J C Álvarez; Vilán, J A Vilán; García-Gonzalo, E

    2015-05-01

    The aim of this research work is to build a regression model of air quality by using the multivariate adaptive regression splines (MARS) technique in the Oviedo urban area (northern Spain) at a local scale. To accomplish the objective of this study, the experimental data set made up of nitrogen oxides (NO x ), carbon monoxide (CO), sulfur dioxide (SO2), ozone (O3), and dust (PM10) was collected over 3 years (2006-2008). The US National Ambient Air Quality Standards (NAAQS) establishes the limit values of the main pollutants in the atmosphere in order to ensure the health of healthy people. Firstly, this MARS regression model captures the main perception of statistical learning theory in order to obtain a good prediction of the dependence among the main pollutants in the Oviedo urban area. Secondly, the main advantages of MARS are its capacity to produce simple, easy-to-interpret models, its ability to estimate the contributions of the input variables, and its computational efficiency. Finally, on the basis of these numerical calculations, using the MARS technique, conclusions of this research work are exposed. PMID:25414030

  10. Using Multivariate Adaptive Regression Spline and Artificial Neural Network to Simulate Urbanization in Mumbai, India

    NASA Astrophysics Data System (ADS)

    Ahmadlou, M.; Delavar, M. R.; Tayyebi, A.; Shafizadeh-Moghadam, H.

    2015-12-01

    Land use change (LUC) models used for modelling urban growth are different in structure and performance. Local models divide the data into separate subsets and fit distinct models on each of the subsets. Non-parametric models are data driven and usually do not have a fixed model structure or model structure is unknown before the modelling process. On the other hand, global models perform modelling using all the available data. In addition, parametric models have a fixed structure before the modelling process and they are model driven. Since few studies have compared local non-parametric models with global parametric models, this study compares a local non-parametric model called multivariate adaptive regression spline (MARS), and a global parametric model called artificial neural network (ANN) to simulate urbanization in Mumbai, India. Both models determine the relationship between a dependent variable and multiple independent variables. We used receiver operating characteristic (ROC) to compare the power of the both models for simulating urbanization. Landsat images of 1991 (TM) and 2010 (ETM+) were used for modelling the urbanization process. The drivers considered for urbanization in this area were distance to urban areas, urban density, distance to roads, distance to water, distance to forest, distance to railway, distance to central business district, number of agricultural cells in a 7 by 7 neighbourhoods, and slope in 1991. The results showed that the area under the ROC curve for MARS and ANN was 94.77% and 95.36%, respectively. Thus, ANN performed slightly better than MARS to simulate urban areas in Mumbai, India.

  11. Validation of cross-sectional time series and multivariate adaptive regression splines models for the prediction of energy expenditure in children and adolescents using doubly labeled water

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Accurate, nonintrusive, and inexpensive techniques are needed to measure energy expenditure (EE) in free-living populations. Our primary aim in this study was to validate cross-sectional time series (CSTS) and multivariate adaptive regression splines (MARS) models based on observable participant cha...

  12. Estimation of soil cation exchange capacity using Genetic Expression Programming (GEP) and Multivariate Adaptive Regression Splines (MARS)

    NASA Astrophysics Data System (ADS)

    Emamgolizadeh, S.; Bateni, S. M.; Shahsavani, D.; Ashrafi, T.; Ghorbani, H.

    2015-10-01

    The soil cation exchange capacity (CEC) is one of the main soil chemical properties, which is required in various fields such as environmental and agricultural engineering as well as soil science. In situ measurement of CEC is time consuming and costly. Hence, numerous studies have used traditional regression-based techniques to estimate CEC from more easily measurable soil parameters (e.g., soil texture, organic matter (OM), and pH). However, these models may not be able to adequately capture the complex and highly nonlinear relationship between CEC and its influential soil variables. In this study, Genetic Expression Programming (GEP) and Multivariate Adaptive Regression Splines (MARS) were employed to estimate CEC from more readily measurable soil physical and chemical variables (e.g., OM, clay, and pH) by developing functional relations. The GEP- and MARS-based functional relations were tested at two field sites in Iran. Results showed that GEP and MARS can provide reliable estimates of CEC. Also, it was found that the MARS model (with root-mean-square-error (RMSE) of 0.318 Cmol+ kg-1 and correlation coefficient (R2) of 0.864) generated slightly better results than the GEP model (with RMSE of 0.270 Cmol+ kg-1 and R2 of 0.807). The performance of GEP and MARS models was compared with two existing approaches, namely artificial neural network (ANN) and multiple linear regression (MLR). The comparison indicated that MARS and GEP outperformed the MLP model, but they did not perform as good as ANN. Finally, a sensitivity analysis was conducted to determine the most and the least influential variables affecting CEC. It was found that OM and pH have the most and least significant effect on CEC, respectively.

  13. The Analysis of Internet Addiction Scale Using Multivariate Adaptive Regression Splines

    PubMed Central

    Kayri, M

    2010-01-01

    Background: Determining real effects on internet dependency is too crucial with unbiased and robust statistical method. MARS is a new non-parametric method in use in the literature for parameter estimations of cause and effect based research. MARS can both obtain legible model curves and make unbiased parametric predictions. Methods: In order to examine the performance of MARS, MARS findings will be compared to Classification and Regression Tree (C&RT) findings, which are considered in the literature to be efficient in revealing correlations between variables. The data set for the study is taken from “The Internet Addiction Scale” (IAS), which attempts to reveal addiction levels of individuals. The population of the study consists of 754 secondary school students (301 female, 443 male students with 10 missing data). MARS 2.0 trial version is used for analysis by MARS method and C&RT analysis was done by SPSS. Results: MARS obtained six base functions of the model. As a common result of these six functions, regression equation of the model was found. Over the predicted variable, MARS showed that the predictors of daily Internet-use time on average, the purpose of Internet-use, grade of students and occupations of mothers had a significant effect (P< 0.05). In this comparative study, MARS obtained different findings from C&RT in dependency level prediction. Conclusion: The fact that MARS revealed extent to which the variable, which was considered significant, changes the character of the model was observed in this study. PMID:23113038

  14. Modeling of topographic effects on Antarctic sea ice using multivariate adaptive regression splines

    NASA Technical Reports Server (NTRS)

    De Veaux, Richard D.; Gordon, Arnold L.; Comiso, Joey C.; Bacherer, Nadine E.

    1993-01-01

    The role of seafloor topography in the spatial variations of the southern ocean sea ice cover as observed (every other day) by the Nimbus 7 scanning multichannel microwave radiometer satellite in the years 1980, 1983, and 1984 is studied. Bottom bathymetry can affect sea ice surface characteristics because of the basically barotropic circulation of the ocean south of the Antarctic Circumpolar current. The main statistical tool used to quantify this effect is a local nonparametric regression model of sea ice concentration as a function of the depth and its first two derivatives in both meridional and zonal directions. First, we model the relationship of bathymetry to sea ice concentration in two sudy areas, one over the Maud Rise and the other over the Ross Sea shelf region. The multiple correlation coefficient is found to average 44% in the Maud Rise study area and 62% in the Ross Sea study area over the years 1980, 1983, and 1984. Second, a strategy of dividing the entire Antarctic region into an overlapping mosaic of small areas, or windows is considered. Keeping the windows small reduces the correlation of bathymetry with other factors such as wind, sea temperature, and distance to the continent. We find that although the form of the model varies from window to window due to the changing role of other relevant environmental variables, we are left with a spatially consistent ordering of the relative importance of the topographic predictors. For a set of three representative days in the Austral winter of 1980, the analysis shows that an average of 54% of the spatial variation in sea ice concentration over the entire ice cover can be attributed to topographic variables. The results thus support the hypothesis that there is a sea ice to bottom bathymetry link. However this should not undermine the considerable influence of wind, current, and temperature which affect the ice distribution directly and are partly responsible for the observed bathymetric effects.

  15. Pan evaporation modeling using least square support vector machine, multivariate adaptive regression splines and M5 model tree

    NASA Astrophysics Data System (ADS)

    Kisi, Ozgur

    2015-09-01

    Pan evaporation (Ep) modeling is an important issue in reservoir management, regional water resources planning and evaluation of drinking-water supplies. The main purpose of this study is to investigate the accuracy of least square support vector machine (LSSVM), multivariate adaptive regression splines (MARS) and M5 Model Tree (M5Tree) in modeling Ep. The first part of the study focused on testing the ability of the LSSVM, MARS and M5Tree models in estimating the Ep data of Mersin and Antalya stations located in Mediterranean Region of Turkey by using cross-validation method. The LSSVM models outperformed the MARS and M5Tree models in estimating Ep of Mersin and Antalya stations with local input and output data. The average root mean square error (RMSE) of the M5Tree and MARS models was decreased by 24-32.1% and 10.8-18.9% using LSSVM models for the Mersin and Antalya stations, respectively. The ability of three different methods was examined in estimation of Ep using input air temperature, solar radiation, relative humidity and wind speed data from nearby station in the second part of the study (cross-station application without local input data). The results showed that the MARS models provided better accuracy than the LSSVM and M5Tree models with respect to RMSE, mean absolute error (MAE) and determination coefficient (R2) criteria. The average RMSE accuracy of the LSSVM and M5Tree was increased by 3.7% and 16.5% using MARS. In the case of without local input data, the average RMSE accuracy of the LSSVM and M5Tree was respectively increased by 11.4% and 18.4% using MARS. In the third part of the study, the ability of the applied models was examined in Ep estimation using input and output data of nearby station. The results reported that the MARS models performed better than the other models with respect to RMSE, MAE and R2 criteria. The average RMSE of the LSSVM and M5Tree was respectively decreased by 54% and 3.4% using MARS. The overall results indicated that

  16. A Spline Regression Model for Latent Variables

    ERIC Educational Resources Information Center

    Harring, Jeffrey R.

    2014-01-01

    Spline (or piecewise) regression models have been used in the past to account for patterns in observed data that exhibit distinct phases. The changepoint or knot marking the shift from one phase to the other, in many applications, is an unknown parameter to be estimated. As an extension of this framework, this research considers modeling the…

  17. Application of least square support vector machine and multivariate adaptive regression spline models in long term prediction of river water pollution

    NASA Astrophysics Data System (ADS)

    Kisi, Ozgur; Parmar, Kulwinder Singh

    2016-03-01

    This study investigates the accuracy of least square support vector machine (LSSVM), multivariate adaptive regression splines (MARS) and M5 model tree (M5Tree) in modeling river water pollution. Various combinations of water quality parameters, Free Ammonia (AMM), Total Kjeldahl Nitrogen (TKN), Water Temperature (WT), Total Coliform (TC), Fecal Coliform (FC) and Potential of Hydrogen (pH) monitored at Nizamuddin, Delhi Yamuna River in India were used as inputs to the applied models. Results indicated that the LSSVM and MARS models had almost same accuracy and they performed better than the M5Tree model in modeling monthly chemical oxygen demand (COD). The average root mean square error (RMSE) of the LSSVM and M5Tree models was decreased by 1.47% and 19.1% using MARS model, respectively. Adding TC input to the models did not increase their accuracy in modeling COD while adding FC and pH inputs to the models generally decreased the accuracy. The overall results indicated that the MARS and LSSVM models could be successfully used in estimating monthly river water pollution level by using AMM, TKN and WT parameters as inputs.

  18. Regional vertical total electron content (VTEC) modeling together with satellite and receiver differential code biases (DCBs) using semi-parametric multivariate adaptive regression B-splines (SP-BMARS)

    NASA Astrophysics Data System (ADS)

    Durmaz, Murat; Karslioglu, Mahmut Onur

    2015-04-01

    There are various global and regional methods that have been proposed for the modeling of ionospheric vertical total electron content (VTEC). Global distribution of VTEC is usually modeled by spherical harmonic expansions, while tensor products of compactly supported univariate B-splines can be used for regional modeling. In these empirical parametric models, the coefficients of the basis functions as well as differential code biases (DCBs) of satellites and receivers can be treated as unknown parameters which can be estimated from geometry-free linear combinations of global positioning system observables. In this work we propose a new semi-parametric multivariate adaptive regression B-splines (SP-BMARS) method for the regional modeling of VTEC together with satellite and receiver DCBs, where the parametric part of the model is related to the DCBs as fixed parameters and the non-parametric part adaptively models the spatio-temporal distribution of VTEC. The latter is based on multivariate adaptive regression B-splines which is a non-parametric modeling technique making use of compactly supported B-spline basis functions that are generated from the observations automatically. This algorithm takes advantage of an adaptive scale-by-scale model building strategy that searches for best-fitting B-splines to the data at each scale. The VTEC maps generated from the proposed method are compared numerically and visually with the global ionosphere maps (GIMs) which are provided by the Center for Orbit Determination in Europe (CODE). The VTEC values from SP-BMARS and CODE GIMs are also compared with VTEC values obtained through calibration using local ionospheric model. The estimated satellite and receiver DCBs from the SP-BMARS model are compared with the CODE distributed DCBs. The results show that the SP-BMARS algorithm can be used to estimate satellite and receiver DCBs while adaptively and flexibly modeling the daily regional VTEC.

  19. Validation of Cross-Sectional Time Series and Multivariate Adaptive Regression Splines Models for the Prediction of Energy Expenditure in Children and Adolescents Using Doubly Labeled Water12

    PubMed Central

    Butte, Nancy F.; Wong, William W.; Adolph, Anne L.; Puyau, Maurice R.; Vohra, Firoz A.; Zakeri, Issa F.

    2010-01-01

    Accurate, nonintrusive, and inexpensive techniques are needed to measure energy expenditure (EE) in free-living populations. Our primary aim in this study was to validate cross-sectional time series (CSTS) and multivariate adaptive regression splines (MARS) models based on observable participant characteristics, heart rate (HR), and accelerometer counts (AC) for prediction of minute-by-minute EE, and hence 24-h total EE (TEE), against a 7-d doubly labeled water (DLW) method in children and adolescents. Our secondary aim was to demonstrate the utility of CSTS and MARS to predict awake EE, sleep EE, and activity EE (AEE) from 7-d HR and AC records, because these shorter periods are not verifiable by DLW, which provides an estimate of the individual's mean TEE over a 7-d interval. CSTS and MARS models were validated in 60 normal-weight and overweight participants (ages 5–18 y). The Actiheart monitor was used to simultaneously measure HR and AC. For prediction of TEE, mean absolute errors were 10.7 ± 307 kcal/d and 18.7 ± 252 kcal/d for CSTS and MARS models, respectively, relative to DLW. Corresponding root mean square error values were 305 and 251 kcal/d for CSTS and MARS models, respectively. Bland-Altman plots indicated that the predicted values were in good agreement with the DLW-derived TEE values. Validation of CSTS and MARS models based on participant characteristics, HR monitoring, and accelerometry for the prediction of minute-by-minute EE, and hence 24-h TEE, against the DLW method indicated no systematic bias and acceptable limits of agreement for pediatric groups and individuals under free-living conditions. PMID:20573939

  20. Validation of cross-sectional time series and multivariate adaptive regression splines models for the prediction of energy expenditure in children and adolescents using doubly labeled water.

    PubMed

    Butte, Nancy F; Wong, William W; Adolph, Anne L; Puyau, Maurice R; Vohra, Firoz A; Zakeri, Issa F

    2010-08-01

    Accurate, nonintrusive, and inexpensive techniques are needed to measure energy expenditure (EE) in free-living populations. Our primary aim in this study was to validate cross-sectional time series (CSTS) and multivariate adaptive regression splines (MARS) models based on observable participant characteristics, heart rate (HR), and accelerometer counts (AC) for prediction of minute-by-minute EE, and hence 24-h total EE (TEE), against a 7-d doubly labeled water (DLW) method in children and adolescents. Our secondary aim was to demonstrate the utility of CSTS and MARS to predict awake EE, sleep EE, and activity EE (AEE) from 7-d HR and AC records, because these shorter periods are not verifiable by DLW, which provides an estimate of the individual's mean TEE over a 7-d interval. CSTS and MARS models were validated in 60 normal-weight and overweight participants (ages 5-18 y). The Actiheart monitor was used to simultaneously measure HR and AC. For prediction of TEE, mean absolute errors were 10.7 +/- 307 kcal/d and 18.7 +/- 252 kcal/d for CSTS and MARS models, respectively, relative to DLW. Corresponding root mean square error values were 305 and 251 kcal/d for CSTS and MARS models, respectively. Bland-Altman plots indicated that the predicted values were in good agreement with the DLW-derived TEE values. Validation of CSTS and MARS models based on participant characteristics, HR monitoring, and accelerometry for the prediction of minute-by-minute EE, and hence 24-h TEE, against the DLW method indicated no systematic bias and acceptable limits of agreement for pediatric groups and individuals under free-living conditions. PMID:20573939

  1. Cross-Sectional Time Series and Multivariate Adaptive Regression Splines Models Using Accelerometry and Heart Rate Predict Energy Expenditure of Preschoolers123

    PubMed Central

    Zakeri, Issa F.; Adolph, Anne L.; Puyau, Maurice R.; Vohra, Firoz A.; Butte, Nancy F.

    2013-01-01

    Prediction equations of energy expenditure (EE) using accelerometers and miniaturized heart rate (HR) monitors have been developed in older children and adults but not in preschool-aged children. Because the relationships between accelerometer counts (ACs), HR, and EE are confounded by growth and maturation, age-specific EE prediction equations are required. We used advanced technology (fast-response room calorimetry, Actiheart and Actigraph accelerometers, and miniaturized HR monitors) and sophisticated mathematical modeling [cross-sectional time series (CSTS) and multivariate adaptive regression splines (MARS)] to develop models for the prediction of minute-by-minute EE in 69 preschool-aged children. CSTS and MARS models were developed by using participant characteristics (gender, age, weight, height), Actiheart (HR+AC_x) or ActiGraph parameters (AC_x, AC_y, AC_z, steps, posture) [x, y, and z represent the directional axes of the accelerometers], and their significant 1- and 2-min lag and lead values, and significant interactions. Relative to EE measured by calorimetry, mean percentage errors predicting awake EE (−1.1 ± 8.7%, 0.3 ± 6.9%, and −0.2 ± 6.9%) with CSTS models were slightly higher than with MARS models (−0.7 ± 6.0%, 0.3 ± 4.8%, and −0.6 ± 4.6%) for Actiheart, ActiGraph, and ActiGraph+HR devices, respectively. Predicted awake EE values were within ±10% for 81–87% of individuals for CSTS models and for 91–98% of individuals for MARS models. Concordance correlation coefficients were 0.936, 0.931, and 0.943 for CSTS EE models and 0.946, 0.948, and 0.940 for MARS EE models for Actiheart, ActiGraph, and ActiGraph+HR devices, respectively. CSTS and MARS models should prove useful in capturing the complex dynamics of EE and movement that are characteristic of preschool-aged children. PMID:23190760

  2. Assessing the response of area burned to changing climate in western boreal North America using a Multivariate Adaptive Regression Splines (MARS) approach

    USGS Publications Warehouse

    Balshi, M. S.; McGuire, A.D.; Duffy, P.; Flannigan, M.; Walsh, J.; Melillo, J.

    2009-01-01

    Fire is a common disturbance in the North American boreal forest that influences ecosystem structure and function. The temporal and spatial dynamics of fire are likely to be altered as climate continues to change. In this study, we ask the question: how will area burned in boreal North America by wildfire respond to future changes in climate? To evaluate this question, we developed temporally and spatially explicit relationships between air temperature and fuel moisture codes derived from the Canadian Fire Weather Index System to estimate annual area burned at 2.5?? (latitude ?? longitude) resolution using a Multivariate Adaptive Regression Spline (MARS) approach across Alaska and Canada. Burned area was substantially more predictable in the western portion of boreal North America than in eastern Canada. Burned area was also not very predictable in areas of substantial topographic relief and in areas along the transition between boreal forest and tundra. At the scale of Alaska and western Canada, the empirical fire models explain on the order of 82% of the variation in annual area burned for the period 1960-2002. July temperature was the most frequently occurring predictor across all models, but the fuel moisture codes for the months June through August (as a group) entered the models as the most important predictors of annual area burned. To predict changes in the temporal and spatial dynamics of fire under future climate, the empirical fire models used output from the Canadian Climate Center CGCM2 global climate model to predict annual area burned through the year 2100 across Alaska and western Canada. Relative to 1991-2000, the results suggest that average area burned per decade will double by 2041-2050 and will increase on the order of 3.5-5.5 times by the last decade of the 21st century. To improve the ability to better predict wildfire across Alaska and Canada, future research should focus on incorporating additional effects of long-term and successional

  3. Semisupervised feature selection via spline regression for video semantic recognition.

    PubMed

    Han, Yahong; Yang, Yi; Yan, Yan; Ma, Zhigang; Sebe, Nicu; Zhou, Xiaofang

    2015-02-01

    To improve both the efficiency and accuracy of video semantic recognition, we can perform feature selection on the extracted video features to select a subset of features from the high-dimensional feature set for a compact and accurate video data representation. Provided the number of labeled videos is small, supervised feature selection could fail to identify the relevant features that are discriminative to target classes. In many applications, abundant unlabeled videos are easily accessible. This motivates us to develop semisupervised feature selection algorithms to better identify the relevant video features, which are discriminative to target classes by effectively exploiting the information underlying the huge amount of unlabeled video data. In this paper, we propose a framework of video semantic recognition by semisupervised feature selection via spline regression (S(2)FS(2)R) . Two scatter matrices are combined to capture both the discriminative information and the local geometry structure of labeled and unlabeled training videos: A within-class scatter matrix encoding discriminative information of labeled training videos and a spline scatter output from a local spline regression encoding data distribution. An l2,1 -norm is imposed as a regularization term on the transformation matrix to ensure it is sparse in rows, making it particularly suitable for feature selection. To efficiently solve S(2)FS(2)R , we develop an iterative algorithm and prove its convergency. In the experiments, three typical tasks of video semantic recognition, such as video concept detection, video classification, and human action recognition, are used to demonstrate that the proposed S(2)FS(2)R achieves better performance compared with the state-of-the-art methods. PMID:25608288

  4. Investigations in Reducing the Computational Expense of Transient 3D Multi-Phase CO2 Wellbore Leakage Simulations: Time-Series Matching versus Multivariate Adaptive Regression Splines

    NASA Astrophysics Data System (ADS)

    Harp, D. R.; Pawar, R.

    2014-12-01

    Depleted oil and gas reserves have abandoned wellbore densities up to 10 per square kilometer (Crow, 2010). These locations are considered to have favorable geological structure and properties for CO2 sequestration. To understand the risk of CO2 leakage along these abandoned wellbores requires the simulation of a comprehensive set of realizations encompassing the potential scenarios. The simulations must capture transient, 3D, multi-phase effects (i.e. supercritical, liquid, and gas CO2 phases along with liquid reservoir and aquifer fluids), and include capillary and buoyant flow. Performing a large number of these simulations becomes computationally burdensome. In order to reduce this computational burden, regression approaches have been used to develop computationally efficient reduced order models to try to capture the general trends of the simulations. In these approaches, model inputs and outputs are collected from the transient simulations at each time step. Recognizing that many of the inputs to the regression approach come from time series (i.e. pressures and CO2 saturations) and that all of the outputs are time series (i.e. CO2 and brine flow rates), we develop a time-series matching approach. In this approach, CO2 and brine flow rate time series are estimated given input time series and parameters by averaging the flow rates of the collected simulations weighted by the similarity of their input time series and parameter. Similarity of both time series and parameters is calculated by the Euclidean distance. Euclidean distances are converted to a generalized likelihood metric, and used to weight the flow-rate time-series averages. We present a comparison of this time series matching approach to the MARS algorithm.

  5. Proteomics Improves the Prediction of Burns Mortality: Results from Regression Spline Modeling

    PubMed Central

    Finnerty, Celeste C.; Ju, Hyunsu; Spratt, Heidi; Victor, Sundar; Jeschke, Marc G.; Hegde, Sachin; Bhavnani, Suresh K.; Luxon, Bruce A.; Brasier, Allan R.; Herndon, David N.

    2012-01-01

    Prediction of mortality in severely burned patients remains unreliable. Although clinical covariates and plasma protein abundance have been used with varying degrees of success, the triad of burn size, inhalation injury, and age remains the most reliable predictor. We investigated the effect of combining proteomics variables with these three clinical covariates on prediction of mortality in burned children. Serum samples were collected from 330 burned children (burns covering >25% of the total body surface area) between admission and the time of the first operation for clinical chemistry analyses and proteomic assays of cytokines. Principal component analysis revealed that serum protein abundance and the clinical covariates each provided independent information regarding patient survival. To determine whether combining proteomics with clinical variables improves prediction of patient mortality, we used multivariate adaptive regression splines, since the relationships between analytes and mortality were not linear. Combining these factors increased overall outcome prediction accuracy from 52% to 81% and area under the receiver operating characteristic curve from 0.82 to 0.95. Thus, the predictive accuracy of burns mortality is substantially improved by combining protein abundance information with clinical covariates in a multivariate adaptive regression splines classifier, a model currently being validated in a prospective study. PMID:22686201

  6. Determination of airplane model structure from flight data using splines and stepwise regression

    NASA Technical Reports Server (NTRS)

    Klein, V.; Batterson, J. G.

    1983-01-01

    A procedure for the determination of airplane model structure from flight data is presented. The model is based on a polynomial spline representation of the aerodynamic coefficients, and the procedure is implemented by use of a stepwise regression. First, a form of the aerodynamic force and moment coefficients amenable to the utilization of splines is developed. Next, expressions for the splines in one and two variables are introduced. Then the steps in the determination of an aerodynamic model structure and the estimation of parameters are discussed briefly. The focus is on the application to flight data of the techniques developed.

  7. Non-Stationary Hydrologic Frequency Analysis using B-Splines Quantile Regression

    NASA Astrophysics Data System (ADS)

    Nasri, B.; St-Hilaire, A.; Bouezmarni, T.; Ouarda, T.

    2015-12-01

    Hydrologic frequency analysis is commonly used by engineers and hydrologists to provide the basic information on planning, design and management of hydraulic structures and water resources system under the assumption of stationarity. However, with increasing evidence of changing climate, it is possible that the assumption of stationarity would no longer be valid and the results of conventional analysis would become questionable. In this study, we consider a framework for frequency analysis of extreme flows based on B-Splines quantile regression, which allows to model non-stationary data that have a dependence on covariates. Such covariates may have linear or nonlinear dependence. A Markov Chain Monte Carlo (MCMC) algorithm is used to estimate quantiles and their posterior distributions. A coefficient of determination for quantiles regression is proposed to evaluate the estimation of the proposed model for each quantile level. The method is applied on annual maximum and minimum streamflow records in Ontario, Canada. Climate indices are considered to describe the non-stationarity in these variables and to estimate the quantiles in this case. The results show large differences between the non-stationary quantiles and their stationary equivalents for annual maximum and minimum discharge with high annual non-exceedance probabilities. Keywords: Quantile regression, B-Splines functions, MCMC, Streamflow, Climate indices, non-stationarity.

  8. Estimates of genetic parameters for Holstein cows for test-day yield traits with a random regression cubic spline model

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Genetic parameters were estimated with REML for individual test-day milk, fat, and protein yields and SCS with a random regression cubic spline model. Test-day records of Holstein cows that calved from 1994 through early 1999 were obtained from Dairy Records Management Systems in Raleigh, North Car...

  9. An adaptive three-dimensional RHT-splines formulation in linear elasto-statics and elasto-dynamics

    NASA Astrophysics Data System (ADS)

    Nguyen-Thanh, N.; Muthu, J.; Zhuang, X.; Rabczuk, T.

    2014-02-01

    An adaptive three-dimensional isogeometric formulation based on rational splines over hierarchical T-meshes (RHT-splines) for problems in elasto-statics and elasto-dynamics is presented. RHT-splines avoid some short-comings of NURBS-based formulations; in particular they allow for adaptive h-refinement with ease. In order to drive the adaptive refinement, we present a recovery-based error estimator for RHT-splines. The method is applied to several problems in elasto-statics and elasto-dynamics including three-dimensional modeling of thin structures. The results are compared to analytical solutions and results of NURBS based isogeometric formulations.

  10. Regression Splines in the Time-Dependent Coefficient Rates Model for Recurrent Event Data

    PubMed Central

    Amorim, Leila D.; Cai, Jianwen; Zeng, Donglin; Barreto, Maurício L.

    2009-01-01

    SUMMARY Many epidemiologic studies involve the occurrence of recurrent events and much attention has been given for the development of modelling techniques that take into account the dependence structure of multiple event data. This paper presents a time-dependent coefficient rates model that incorporates regression splines in its estimation procedure. Such method would be appropriate in situations where the effect of an exposure or covariates changes over time in recurrent event data settings. The finite sample properties of the estimators are studied via simulation. Using data from a randomized community trial that was designed to evaluate the effect of vitamin A supplementation on recurrent diarrheal episodes in small children, we model the functional form of the treatment effect on the time to the occurrence of diarrhea. The results describe how this effect varies over time. In summary, we observed a major impact of the vitamin A supplementation on diarrhea after 2 months of the dosage, with the effect diminishing after the third dosage. The proposed method can be viewed as a flexible alternative to the marginal rates model with constant effect in situations where the effect of interest may vary over time. PMID:18696748

  11. Algebraic grid adaptation method using non-uniform rational B-spline surface modeling

    NASA Technical Reports Server (NTRS)

    Yang, Jiann-Cherng; Soni, B. K.

    1992-01-01

    An algebraic adaptive grid system based on equidistribution law and utilized by the Non-Uniform Rational B-Spline (NURBS) surface for redistribution is presented. A weight function, utilizing a properly weighted boolean sum of various flow field characteristics is developed. Computational examples are presented to demonstrate the success of this technique.

  12. Split spline screw

    NASA Technical Reports Server (NTRS)

    Vranish, John M. (Inventor)

    1993-01-01

    A split spline screw type payload fastener assembly, including three identical male and female type split spline sections, is discussed. The male spline sections are formed on the head of a male type spline driver. Each of the split male type spline sections has an outwardly projecting load baring segment including a convex upper surface which is adapted to engage a complementary concave surface of a female spline receptor in the form of a hollow bolt head. Additionally, the male spline section also includes a horizontal spline releasing segment and a spline tightening segment below each load bearing segment. The spline tightening segment consists of a vertical web of constant thickness. The web has at least one flat vertical wall surface which is designed to contact a generally flat vertically extending wall surface tab of the bolt head. Mutual interlocking and unlocking of the male and female splines results upon clockwise and counter clockwise turning of the driver element.

  13. Self-Adaptive Induction of Regression Trees.

    PubMed

    Fidalgo-Merino, Raúl; Núñez, Marlon

    2011-08-01

    A new algorithm for incremental construction of binary regression trees is presented. This algorithm, called SAIRT, adapts the induced model when facing data streams involving unknown dynamics, like gradual and abrupt function drift, changes in certain regions of the function, noise, and virtual drift. It also handles both symbolic and numeric attributes. The proposed algorithm can automatically adapt its internal parameters and model structure to obtain new patterns, depending on the current dynamics of the data stream. SAIRT can monitor the usefulness of nodes and can forget examples from selected regions, storing the remaining ones in local windows associated to the leaves of the tree. On these conditions, current regression methods need a careful configuration depending on the dynamics of the problem. Experimentation suggests that the proposed algorithm obtains better results than current algorithms when dealing with data streams that involve changes with different speeds, noise levels, sampling distribution of examples, and partial or complete changes of the underlying function. PMID:21263164

  14. Growth comparison of several Escherichia coli strains exposed to various concentrations of lactoferrin using linear spline regression

    PubMed Central

    2012-01-01

    Background We wanted to compare growth differences between 13 Escherichia coli strains exposed to various concentrations of the growth inhibitor lactoferrin in two different types of broth (Syncase and Luria-Bertani (LB)). To carry this out, we present a simple statistical procedure that separates microbial growth curves that are due to natural random perturbations and growth curves that are more likely caused by biological differences. Bacterial growth was determined using optical density data (OD) recorded for triplicates at 620 nm for 18 hours for each strain. Each resulting growth curve was divided into three equally spaced intervals. We propose a procedure using linear spline regression with two knots to compute the slopes of each interval in the bacterial growth curves. These slopes are subsequently used to estimate a 95% confidence interval based on an appropriate statistical distribution. Slopes outside the confidence interval were considered as significantly different from slopes within. We also demonstrate the use of related, but more advanced methods known collectively as generalized additive models (GAMs) to model growth. In addition to impressive curve fitting capabilities with corresponding confidence intervals, GAM’s allow for the computation of derivatives, i.e. growth rate estimation, with respect to each time point. Results The results from our proposed procedure agreed well with the observed data. The results indicated that there were substantial growth differences between the E. coli strains. Most strains exhibited improved growth in the nutrient rich LB broth compared to Syncase. The inhibiting effect of lactoferrin varied between the different strains. The atypical enteropathogenic aEPEC-2 grew, on average, faster in both broths than the other strains tested while the enteroinvasive strains, EIEC-6 and EIEC-7 grew slower. The enterotoxigenic ETEC-5 strain, exhibited exceptional growth in Syncase broth, but slower growth in LB broth

  15. Hierarchical Adaptive Regression Kernels for Regression with Functional Predictors

    PubMed Central

    Woodard, Dawn B.; Crainiceanu, Ciprian; Ruppert, David

    2013-01-01

    We propose a new method for regression using a parsimonious and scientifically interpretable representation of functional predictors. Our approach is designed for data that exhibit features such as spikes, dips, and plateaus whose frequency, location, size, and shape varies stochastically across subjects. We propose Bayesian inference of the joint functional and exposure models, and give a method for efficient computation. We contrast our approach with existing state-of-the-art methods for regression with functional predictors, and show that our method is more effective and efficient for data that include features occurring at varying locations. We apply our methodology to a large and complex dataset from the Sleep Heart Health Study, to quantify the association between sleep characteristics and health outcomes. Software and technical appendices are provided in online supplemental materials. PMID:24293988

  16. A baseline correction algorithm for Raman spectroscopy by adaptive knots B-spline

    NASA Astrophysics Data System (ADS)

    Wang, Xin; Fan, Xian-guang; Xu, Ying-jie; Wang, Xiu-fen; He, Hao; Zuo, Yong

    2015-11-01

    The Raman spectroscopy technique is a powerful and non-invasive technique for molecular fingerprint detection which has been widely used in many areas, such as food safety, drug safety, and environmental testing. But Raman signals can be easily corrupted by a fluorescent background, therefore we presented a baseline correction algorithm to suppress the fluorescent background in this paper. In this algorithm, the background of the Raman signal was suppressed by fitting a curve called a baseline using a cyclic approximation method. Instead of the traditional polynomial fitting, we used the B-spline as the fitting algorithm due to its advantages of low-order and smoothness, which can avoid under-fitting and over-fitting effectively. In addition, we also presented an automatic adaptive knot generation method to replace traditional uniform knots. This algorithm can obtain the desired performance for most Raman spectra with varying baselines without any user input or preprocessing step. In the simulation, three kinds of fluorescent background lines were introduced to test the effectiveness of the proposed method. We showed that two real Raman spectra (parathion-methyl and colza oil) can be detected and their baselines were also corrected by the proposed method.

  17. Adaptation of a cubic smoothing spline algortihm for multi-channel data stitching at the National Ignition Facility

    SciTech Connect

    Brown, C; Adcock, A; Azevedo, S; Liebman, J; Bond, E

    2010-12-28

    Some diagnostics at the National Ignition Facility (NIF), including the Gamma Reaction History (GRH) diagnostic, require multiple channels of data to achieve the required dynamic range. These channels need to be stitched together into a single time series, and they may have non-uniform and redundant time samples. We chose to apply the popular cubic smoothing spline technique to our stitching problem because we needed a general non-parametric method. We adapted one of the algorithms in the literature, by Hutchinson and deHoog, to our needs. The modified algorithm and the resulting code perform a cubic smoothing spline fit to multiple data channels with redundant time samples and missing data points. The data channels can have different, time-varying, zero-mean white noise characteristics. The method we employ automatically determines an optimal smoothing level by minimizing the Generalized Cross Validation (GCV) score. In order to automatically validate the smoothing level selection, the Weighted Sum-Squared Residual (WSSR) and zero-mean tests are performed on the residuals. Further, confidence intervals, both analytical and Monte Carlo, are also calculated. In this paper, we describe the derivation of our cubic smoothing spline algorithm. We outline the algorithm and test it with simulated and experimental data.

  18. Adaptive Confidence Bands for Nonparametric Regression Functions

    PubMed Central

    Cai, T. Tony; Low, Mark; Ma, Zongming

    2014-01-01

    A new formulation for the construction of adaptive confidence bands in non-parametric function estimation problems is proposed. Confidence bands are constructed which have size that adapts to the smoothness of the function while guaranteeing that both the relative excess mass of the function lying outside the band and the measure of the set of points where the function lies outside the band are small. It is shown that the bands adapt over a maximum range of Lipschitz classes. The adaptive confidence band can be easily implemented in standard statistical software with wavelet support. Numerical performance of the procedure is investigated using both simulated and real datasets. The numerical results agree well with the theoretical analysis. The procedure can be easily modified and used for other nonparametric function estimation models. PMID:26269661

  19. Local Adaptive Calibration of the GLASS Surface Incident Shortwave Radiation Product Using Smoothing Spline

    NASA Astrophysics Data System (ADS)

    Zhang, X.; Liang, S.; Wang, G.

    2015-12-01

    Incident solar radiation (ISR) over the Earth's surface plays an important role in determining the Earth's climate and environment. Generally, can be obtained from direct measurements, remotely sensed data, or reanalysis and general circulation models (GCMs) data. Each type of product has advantages and limitations: the surface direct measurements provide accurate but sparse spatial coverage, whereas other global products may have large uncertainties. Ground measurements have been normally used for validation and occasionally calibration, but transforming their "true values" spatially to improve the satellite products is still a new and challenging topic. In this study, an improved thin-plate smoothing spline approach is presented to locally "calibrate" the Global LAnd Surface Satellite (GLASS) ISR product using the reconstructed ISR data from surface meteorological measurements. The influences of surface elevation on ISR estimation was also considered in the proposed method. The point-based surface reconstructed ISR was used as the response variable, and the GLASS ISR product and the surface elevation data at the corresponding locations as explanatory variables to train the thin plate spline model. We evaluated the performance of the approach using the cross-validation method at both daily and monthly time scales over China. We also evaluated estimated ISR based on the thin-plate spline method using independent ground measurements at 10 sites from the Coordinated Enhanced Observation Network (CEON). These validation results indicated that the thin plate smoothing spline method can be effectively used for calibrating satellite derived ISR products using ground measurements to achieve better accuracy.

  20. PARAMETRIC AND NON PARAMETRIC (MARS: MULTIVARIATE ADDITIVE REGRESSION SPLINES) LOGISTIC REGRESSIONS FOR PREDICTION OF A DICHOTOMOUS RESPONSE VARIABLE WITH AN EXAMPLE FOR PRESENCE/ABSENCE OF AMPHIBIANS

    EPA Science Inventory

    The purpose of this report is to provide a reference manual that could be used by investigators for making informed use of logistic regression using two methods (standard logistic regression and MARS). The details for analyses of relationships between a dependent binary response ...

  1. Natural Cubic Spline Regression Modeling Followed by Dynamic Network Reconstruction for the Identification of Radiation-Sensitivity Gene Association Networks from Time-Course Transcriptome Data.

    PubMed

    Michna, Agata; Braselmann, Herbert; Selmansberger, Martin; Dietz, Anne; Hess, Julia; Gomolka, Maria; Hornhardt, Sabine; Blüthgen, Nils; Zitzelsberger, Horst; Unger, Kristian

    2016-01-01

    Gene expression time-course experiments allow to study the dynamics of transcriptomic changes in cells exposed to different stimuli. However, most approaches for the reconstruction of gene association networks (GANs) do not propose prior-selection approaches tailored to time-course transcriptome data. Here, we present a workflow for the identification of GANs from time-course data using prior selection of genes differentially expressed over time identified by natural cubic spline regression modeling (NCSRM). The workflow comprises three major steps: 1) the identification of differentially expressed genes from time-course expression data by employing NCSRM, 2) the use of regularized dynamic partial correlation as implemented in GeneNet to infer GANs from differentially expressed genes and 3) the identification and functional characterization of the key nodes in the reconstructed networks. The approach was applied on a time-resolved transcriptome data set of radiation-perturbed cell culture models of non-tumor cells with normal and increased radiation sensitivity. NCSRM detected significantly more genes than another commonly used method for time-course transcriptome analysis (BETR). While most genes detected with BETR were also detected with NCSRM the false-detection rate of NCSRM was low (3%). The GANs reconstructed from genes detected with NCSRM showed a better overlap with the interactome network Reactome compared to GANs derived from BETR detected genes. After exposure to 1 Gy the normal sensitive cells showed only sparse response compared to cells with increased sensitivity, which exhibited a strong response mainly of genes related to the senescence pathway. After exposure to 10 Gy the response of the normal sensitive cells was mainly associated with senescence and that of cells with increased sensitivity with apoptosis. We discuss these results in a clinical context and underline the impact of senescence-associated pathways in acute radiation response of normal

  2. Natural Cubic Spline Regression Modeling Followed by Dynamic Network Reconstruction for the Identification of Radiation-Sensitivity Gene Association Networks from Time-Course Transcriptome Data

    PubMed Central

    Michna, Agata; Braselmann, Herbert; Selmansberger, Martin; Dietz, Anne; Hess, Julia; Gomolka, Maria; Hornhardt, Sabine; Blüthgen, Nils; Zitzelsberger, Horst; Unger, Kristian

    2016-01-01

    Gene expression time-course experiments allow to study the dynamics of transcriptomic changes in cells exposed to different stimuli. However, most approaches for the reconstruction of gene association networks (GANs) do not propose prior-selection approaches tailored to time-course transcriptome data. Here, we present a workflow for the identification of GANs from time-course data using prior selection of genes differentially expressed over time identified by natural cubic spline regression modeling (NCSRM). The workflow comprises three major steps: 1) the identification of differentially expressed genes from time-course expression data by employing NCSRM, 2) the use of regularized dynamic partial correlation as implemented in GeneNet to infer GANs from differentially expressed genes and 3) the identification and functional characterization of the key nodes in the reconstructed networks. The approach was applied on a time-resolved transcriptome data set of radiation-perturbed cell culture models of non-tumor cells with normal and increased radiation sensitivity. NCSRM detected significantly more genes than another commonly used method for time-course transcriptome analysis (BETR). While most genes detected with BETR were also detected with NCSRM the false-detection rate of NCSRM was low (3%). The GANs reconstructed from genes detected with NCSRM showed a better overlap with the interactome network Reactome compared to GANs derived from BETR detected genes. After exposure to 1 Gy the normal sensitive cells showed only sparse response compared to cells with increased sensitivity, which exhibited a strong response mainly of genes related to the senescence pathway. After exposure to 10 Gy the response of the normal sensitive cells was mainly associated with senescence and that of cells with increased sensitivity with apoptosis. We discuss these results in a clinical context and underline the impact of senescence-associated pathways in acute radiation response of normal

  3. Hypnotizability as a Function of Repression, Adaptive Regression, and Mood

    ERIC Educational Resources Information Center

    Silver, Maurice Joseph

    1974-01-01

    Forty male undergraduates were assessed in a personality assessment session and a hypnosis session. The personality traits studied were repressive style and adaptive regression, while the transitory variable was mood prior to hypnosis. Hypnotizability was a significant interactive function of repressive style and mood, but not of adaptive…

  4. Use of a non-linear spline regression to model time-varying fluctuations in mammary-secretion element concentrations of periparturient mares in Michigan, USA.

    PubMed

    Lloyd, J W; Rook, J S; Braselton, E; Shea, M E

    2000-02-01

    A study was designed to model the fluctuations of nine specific element concentrations in mammary secretions from periparturient mares over time. During the 1992 foaling season, serial samples of mammary secretions were collected from all 18 pregnant Arabian mares at the Michigan State University equine teaching and research center. Non-linear regression techniques were used to model the relationship between element concentration in mammary secretions and days from foaling (which connected two separate sigmoid curves with a spline function); indicator variables were included for mare and mare parity. Element concentrations in mammary secretions varied significantly during the periparturient period in mares. Both time trends and individual variability explained a significant portion of the variation in these element concentrations. Multiparous mares had lower concentrations of K and Zn, but higher concentrations of Na. Substantial serial and spatial correlation were detected in spite of modeling efforts to avoid the problem. As a result, p-values obtained for parameter estimates were likely biased toward zero. Nonetheless, results of this analysis indicate that monitoring changes in mammary-secretion element concentrations might reasonably be used as a predictor of impending parturition in the mare. In addition, these results suggest that element concentrations warrant attention in the development of neonatal milk-replacement therapies. This study demonstrates that non-linear regression can be used successfully to model time-series data in animal-health management. This approach should be considered by investigators facing similar analytical challenges. PMID:10782599

  5. Adaptive support vector regression for UAV flight control.

    PubMed

    Shin, Jongho; Jin Kim, H; Kim, Youdan

    2011-01-01

    This paper explores an application of support vector regression for adaptive control of an unmanned aerial vehicle (UAV). Unlike neural networks, support vector regression (SVR) generates global solutions, because SVR basically solves quadratic programming (QP) problems. With this advantage, the input-output feedback-linearized inverse dynamic model and the compensation term for the inversion error are identified off-line, which we call I-SVR (inversion SVR) and C-SVR (compensation SVR), respectively. In order to compensate for the inversion error and the unexpected uncertainty, an online adaptation algorithm for the C-SVR is proposed. Then, the stability of the overall error dynamics is analyzed by the uniformly ultimately bounded property in the nonlinear system theory. In order to validate the effectiveness of the proposed adaptive controller, numerical simulations are performed on the UAV model. PMID:20970303

  6. GLOBALLY ADAPTIVE QUANTILE REGRESSION WITH ULTRA-HIGH DIMENSIONAL DATA

    PubMed Central

    Zheng, Qi; Peng, Limin; He, Xuming

    2015-01-01

    Quantile regression has become a valuable tool to analyze heterogeneous covaraite-response associations that are often encountered in practice. The development of quantile regression methodology for high dimensional covariates primarily focuses on examination of model sparsity at a single or multiple quantile levels, which are typically prespecified ad hoc by the users. The resulting models may be sensitive to the specific choices of the quantile levels, leading to difficulties in interpretation and erosion of confidence in the results. In this article, we propose a new penalization framework for quantile regression in the high dimensional setting. We employ adaptive L1 penalties, and more importantly, propose a uniform selector of the tuning parameter for a set of quantile levels to avoid some of the potential problems with model selection at individual quantile levels. Our proposed approach achieves consistent shrinkage of regression quantile estimates across a continuous range of quantiles levels, enhancing the flexibility and robustness of the existing penalized quantile regression methods. Our theoretical results include the oracle rate of uniform convergence and weak convergence of the parameter estimators. We also use numerical studies to confirm our theoretical findings and illustrate the practical utility of our proposal. PMID:26604424

  7. Complex Environmental Data Modelling Using Adaptive General Regression Neural Networks

    NASA Astrophysics Data System (ADS)

    Kanevski, Mikhail

    2015-04-01

    The research deals with an adaptation and application of Adaptive General Regression Neural Networks (GRNN) to high dimensional environmental data. GRNN [1,2,3] are efficient modelling tools both for spatial and temporal data and are based on nonparametric kernel methods closely related to classical Nadaraya-Watson estimator. Adaptive GRNN, using anisotropic kernels, can be also applied for features selection tasks when working with high dimensional data [1,3]. In the present research Adaptive GRNN are used to study geospatial data predictability and relevant feature selection using both simulated and real data case studies. The original raw data were either three dimensional monthly precipitation data or monthly wind speeds embedded into 13 dimensional space constructed by geographical coordinates and geo-features calculated from digital elevation model. GRNN were applied in two different ways: 1) adaptive GRNN with the resulting list of features ordered according to their relevancy; and 2) adaptive GRNN applied to evaluate all possible models N [in case of wind fields N=(2^13 -1)=8191] and rank them according to the cross-validation error. In both cases training were carried out applying leave-one-out procedure. An important result of the study is that the set of the most relevant features depends on the month (strong seasonal effect) and year. The predictabilities of precipitation and wind field patterns, estimated using the cross-validation and testing errors of raw and shuffled data, were studied in detail. The results of both approaches were qualitatively and quantitatively compared. In conclusion, Adaptive GRNN with their ability to select features and efficient modelling of complex high dimensional data can be widely used in automatic/on-line mapping and as an integrated part of environmental decision support systems. 1. Kanevski M., Pozdnoukhov A., Timonin V. Machine Learning for Spatial Environmental Data. Theory, applications and software. EPFL Press

  8. Splines and control theory

    NASA Technical Reports Server (NTRS)

    Zhang, Zhimin; Tomlinson, John; Martin, Clyde

    1994-01-01

    In this work, the relationship between splines and the control theory has been analyzed. We show that spline functions can be constructed naturally from the control theory. By establishing a framework based on control theory, we provide a simple and systematic way to construct splines. We have constructed the traditional spline functions including the polynomial splines and the classical exponential spline. We have also discovered some new spline functions such as trigonometric splines and the combination of polynomial, exponential and trigonometric splines. The method proposed in this paper is easy to implement. Some numerical experiments are performed to investigate properties of different spline approximations.

  9. Bisphenol-A exposures and behavioural aberrations: median and linear spline and meta-regression analyses of 12 toxicity studies in rodents.

    PubMed

    Peluso, Marco E M; Munnia, Armelle; Ceppi, Marcello

    2014-11-01

    Exposures to bisphenol-A, a weak estrogenic chemical, largely used for the production of plastic containers, can affect the rodent behaviour. Thus, we examined the relationships between bisphenol-A and the anxiety-like behaviour, spatial skills, and aggressiveness, in 12 toxicity studies of rodent offspring from females orally exposed to bisphenol-A, while pregnant and/or lactating, by median and linear splines analyses. Subsequently, the meta-regression analysis was applied to quantify the behavioural changes. U-shaped, inverted U-shaped and J-shaped dose-response curves were found to describe the relationships between bisphenol-A with the behavioural outcomes. The occurrence of anxiogenic-like effects and spatial skill changes displayed U-shaped and inverted U-shaped curves, respectively, providing examples of effects that are observed at low-doses. Conversely, a J-dose-response relationship was observed for aggressiveness. When the proportion of rodents expressing certain traits or the time that they employed to manifest an attitude was analysed, the meta-regression indicated that a borderline significant increment of anxiogenic-like effects was present at low-doses regardless of sexes (β)=-0.8%, 95% C.I. -1.7/0.1, P=0.076, at ≤120 μg bisphenol-A. Whereas, only bisphenol-A-males exhibited a significant inhibition of spatial skills (β)=0.7%, 95% C.I. 0.2/1.2, P=0.004, at ≤100 μg/day. A significant increment of aggressiveness was observed in both the sexes (β)=67.9,C.I. 3.4, 172.5, P=0.038, at >4.0 μg. Then, bisphenol-A treatments significantly abrogated spatial learning and ability in males (P<0.001 vs. females). Overall, our study showed that developmental exposures to low-doses of bisphenol-A, e.g. ≤120 μg/day, were associated to behavioural aberrations in offspring. PMID:25242006

  10. Robust, Adaptive Functional Regression in Functional Mixed Model Framework

    PubMed Central

    Zhu, Hongxiao; Brown, Philip J.; Morris, Jeffrey S.

    2012-01-01

    Functional data are increasingly encountered in scientific studies, and their high dimensionality and complexity lead to many analytical challenges. Various methods for functional data analysis have been developed, including functional response regression methods that involve regression of a functional response on univariate/multivariate predictors with nonparametrically represented functional coefficients. In existing methods, however, the functional regression can be sensitive to outlying curves and outlying regions of curves, so is not robust. In this paper, we introduce a new Bayesian method, robust functional mixed models (R-FMM), for performing robust functional regression within the general functional mixed model framework, which includes multiple continuous or categorical predictors and random effect functions accommodating potential between-function correlation induced by the experimental design. The underlying model involves a hierarchical scale mixture model for the fixed effects, random effect and residual error functions. These modeling assumptions across curves result in robust nonparametric estimators of the fixed and random effect functions which down-weight outlying curves and regions of curves, and produce statistics that can be used to flag global and local outliers. These assumptions also lead to distributions across wavelet coefficients that have outstanding sparsity and adaptive shrinkage properties, with great flexibility for the data to determine the sparsity and the heaviness of the tails. Together with the down-weighting of outliers, these within-curve properties lead to fixed and random effect function estimates that appear in our simulations to be remarkably adaptive in their ability to remove spurious features yet retain true features of the functions. We have developed general code to implement this fully Bayesian method that is automatic, requiring the user to only provide the functional data and design matrices. It is efficient

  11. A locally adaptive kernel regression method for facies delineation

    NASA Astrophysics Data System (ADS)

    Fernàndez-Garcia, D.; Barahona-Palomo, M.; Henri, C. V.; Sanchez-Vila, X.

    2015-12-01

    Facies delineation is defined as the separation of geological units with distinct intrinsic characteristics (grain size, hydraulic conductivity, mineralogical composition). A major challenge in this area stems from the fact that only a few scattered pieces of hydrogeological information are available to delineate geological facies. Several methods to delineate facies are available in the literature, ranging from those based only on existing hard data, to those including secondary data or external knowledge about sedimentological patterns. This paper describes a methodology to use kernel regression methods as an effective tool for facies delineation. The method uses both the spatial and the actual sampled values to produce, for each individual hard data point, a locally adaptive steering kernel function, self-adjusting the principal directions of the local anisotropic kernels to the direction of highest local spatial correlation. The method is shown to outperform the nearest neighbor classification method in a number of synthetic aquifers whenever the available number of hard data is small and randomly distributed in space. In the case of exhaustive sampling, the steering kernel regression method converges to the true solution. Simulations ran in a suite of synthetic examples are used to explore the selection of kernel parameters in typical field settings. It is shown that, in practice, a rule of thumb can be used to obtain suboptimal results. The performance of the method is demonstrated to significantly improve when external information regarding facies proportions is incorporated. Remarkably, the method allows for a reasonable reconstruction of the facies connectivity patterns, shown in terms of breakthrough curves performance.

  12. An Adaptive B-Spline Method for Low-order Image Reconstruction Problems - Final Report - 09/24/1997 - 09/24/2000

    SciTech Connect

    Li, Xin; Miller, Eric L.; Rappaport, Carey; Silevich, Michael

    2000-04-11

    A common problem in signal processing is to estimate the structure of an object from noisy measurements linearly related to the desired image. These problems are broadly known as inverse problems. A key feature which complicates the solution to such problems is their ill-posedness. That is, small perturbations in the data arising e.g. from noise can and do lead to severe, non-physical artifacts in the recovered image. The process of stabilizing these problems is known as regularization of which Tikhonov regularization is one of the most common. While this approach leads to a simple linear least squares problem to solve for generating the reconstruction, it has the unfortunate side effect of producing smooth images thereby obscuring important features such as edges. Therefore, over the past decade there has been much work in the development of edge-preserving regularizers. This technique leads to image estimates in which the important features are retained, but computationally the y require the solution of a nonlinear least squares problem, a daunting task in many practical multi-dimensional applications. In this thesis we explore low-order models for reducing the complexity of the re-construction process. Specifically, B-Splines are used to approximate the object. If a ''proper'' collection B-Splines are chosen that the object can be efficiently represented using a few basis functions, the dimensionality of the underlying problem will be significantly decreased. Consequently, an optimum distribution of splines needs to be determined. Here, an adaptive refining and pruning algorithm is developed to solve the problem. The refining part is based on curvature information, in which the intuition is that a relatively dense set of fine scale basis elements should cluster near regions of high curvature while a spares collection of basis vectors are required to adequately represent the object over spatially smooth areas. The pruning part is a greedy search algorithm to find

  13. A Free-Knot Spline Modeling Framework for Piecewise Linear Logistic Regression in Complex Samples with Body Mass Index and Mortality as an Example

    PubMed Central

    Keith, Scott W.; Allison, David B.

    2014-01-01

    This paper details the design, evaluation, and implementation of a framework for detecting and modeling non-linearity between a binary outcome and a continuous predictor variable adjusted for covariates in complex samples. The framework provides familiar-looking parameterizations of output in terms of linear slope coefficients and odds ratios. Estimation methods focus on maximum likelihood optimization of piecewise linear free-knot splines formulated as B-splines. Correctly specifying the optimal number and positions of the knots improves the model, but is marked by computational intensity and numerical instability. Our inference methods utilize both parametric and non-parametric bootstrapping. Unlike other non-linear modeling packages, this framework is designed to incorporate multistage survey sample designs common to nationally representative datasets. We illustrate the approach and evaluate its performance in specifying the correct number of knots under various conditions with an example using body mass index (BMI, kg/m2) and the complex multistage sampling design from the Third National Health and Nutrition Examination Survey to simulate binary mortality outcomes data having realistic non-linear sample-weighted risk associations with BMI. BMI and mortality data provide a particularly apt example and area of application since BMI is commonly recorded in large health surveys with complex designs, often categorized for modeling, and non-linearly related to mortality. When complex sample design considerations were ignored, our method was generally similar to or more accurate than two common model selection procedures, Schwarz’s Bayesian Information Criterion (BIC) and Akaike’s Information Criterion (AIC), in terms of correctly selecting the correct number of knots. Our approach provided accurate knot selections when complex sampling weights were incorporated, while AIC and BIC were not effective under these conditions. PMID:25610831

  14. Prediction of energy expenditure from heart rate and accelerometry in children and adolescents using multivariate adaptive regression splines modeling

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Free-living measurements of 24-h total energy expenditure (TEE) and activity energy expenditure (AEE) are required to better understand the metabolic, physiological, behavioral, and environmental factors affecting energy balance and contributing to the global epidemic of childhood obesity. The spec...

  15. Dissociating Conflict Adaptation from Feature Integration: A Multiple Regression Approach

    ERIC Educational Resources Information Center

    Notebaert, Wim; Verguts, Tom

    2007-01-01

    Congruency effects are typically smaller after incongruent than after congruent trials. One explanation is in terms of higher levels of cognitive control after detection of conflict (conflict adaptation; e.g., M. M. Botvinick, T. S. Braver, D. M. Barch, C. S. Carter, & J. D. Cohen, 2001). An alternative explanation for these results is based on…

  16. Adaptation of a Weighted Regression Approach to Evaluate Water Quality Trends in an Estuary

    EPA Science Inventory

    To improve the description of long-term changes in water quality, we adapted a weighted regression approach to analyze a long-term water quality dataset from Tampa Bay, Florida. The weighted regression approach, originally developed to resolve pollutant transport trends in rivers...

  17. Adaptation of a weighted regression approach to evaluate water quality trends in anestuary

    EPA Science Inventory

    To improve the description of long-term changes in water quality, a weighted regression approach developed to describe trends in pollutant transport in rivers was adapted to analyze a long-term water quality dataset from Tampa Bay, Florida. The weighted regression approach allows...

  18. Weighted Structural Regression: A Broad Class of Adaptive Methods for Improving Linear Prediction.

    ERIC Educational Resources Information Center

    Pruzek, Robert M.; Lepak, Greg M.

    1992-01-01

    Adaptive forms of weighted structural regression are developed and discussed. Bootstrapping studies indicate that the new methods have potential to recover known population regression weights and predict criterion score values routinely better than do ordinary least squares methods. The new methods are scale free and simple to compute. (SLD)

  19. Pax6 in Collembola: Adaptive Evolution of Eye Regression

    PubMed Central

    Hou, Ya-Nan; Li, Sheng; Luan, Yun-Xia

    2016-01-01

    Unlike the compound eyes in insects, collembolan eyes are comparatively simple: some species have eyes with different numbers of ocelli (1 + 1 to 8 + 8), and some species have no apparent eye structures. Pax6 is a universal master control gene for eye morphogenesis. In this study, full-length Pax6 cDNAs, Fc-Pax6 and Cd-Pax6, were cloned from an eyeless collembolan (Folsomia candida, soil-dwelling) and an eyed one (Ceratophysella denticulata, surface-dwelling), respectively. Their phylogenetic positions are between the two Pax6 paralogs in insects, eyeless (ey) and twin of eyeless (toy), and their protein sequences are more similar to Ey than to Toy. Both Fc-Pax6 and Cd-Pax6 could induce ectopic eyes in Drosophila, while Fc-Pax6 exhibited much weaker transactivation ability than Cd-Pax6. The C-terminus of collembolan Pax6 is indispensable for its transactivation ability, and determines the differences of transactivation ability between Fc-Pax6 and Cd-Pax6. One of the possible reasons is that Fc-Pax6 accumulated more mutations at some key functional sites of C-terminus under a lower selection pressure on eye development due to the dark habitats of F. candida. The composite data provide a first molecular evidence for the monophyletic origin of collembolan eyes, and indicate the eye degeneration of collembolans is caused by adaptive evolution. PMID:26856893

  20. Gear Spline Coupling Program

    2013-08-29

    An analytical model is developed to evaluate the design of a spline coupling. For a given torque and shaft misalignment, the model calculates the number of teeth in contact, tooth loads, stiffnesses, stresses, and safety factors. The analytic model provides essential spline coupling design and modeling information and could be easily integrated into gearbox design and simulation tools.

  1. Regularized logistic regression with adjusted adaptive elastic net for gene selection in high dimensional cancer classification.

    PubMed

    Algamal, Zakariya Yahya; Lee, Muhammad Hisyam

    2015-12-01

    Cancer classification and gene selection in high-dimensional data have been popular research topics in genetics and molecular biology. Recently, adaptive regularized logistic regression using the elastic net regularization, which is called the adaptive elastic net, has been successfully applied in high-dimensional cancer classification to tackle both estimating the gene coefficients and performing gene selection simultaneously. The adaptive elastic net originally used elastic net estimates as the initial weight, however, using this weight may not be preferable for certain reasons: First, the elastic net estimator is biased in selecting genes. Second, it does not perform well when the pairwise correlations between variables are not high. Adjusted adaptive regularized logistic regression (AAElastic) is proposed to address these issues and encourage grouping effects simultaneously. The real data results indicate that AAElastic is significantly consistent in selecting genes compared to the other three competitor regularization methods. Additionally, the classification performance of AAElastic is comparable to the adaptive elastic net and better than other regularization methods. Thus, we can conclude that AAElastic is a reliable adaptive regularized logistic regression method in the field of high-dimensional cancer classification. PMID:26520484

  2. Locally-Based Kernal PLS Smoothing to Non-Parametric Regression Curve Fitting

    NASA Technical Reports Server (NTRS)

    Rosipal, Roman; Trejo, Leonard J.; Wheeler, Kevin; Korsmeyer, David (Technical Monitor)

    2002-01-01

    We present a novel smoothing approach to non-parametric regression curve fitting. This is based on kernel partial least squares (PLS) regression in reproducing kernel Hilbert space. It is our concern to apply the methodology for smoothing experimental data where some level of knowledge about the approximate shape, local inhomogeneities or points where the desired function changes its curvature is known a priori or can be derived based on the observed noisy data. We propose locally-based kernel PLS regression that extends the previous kernel PLS methodology by incorporating this knowledge. We compare our approach with existing smoothing splines, hybrid adaptive splines and wavelet shrinkage techniques on two generated data sets.

  3. Speaker adaptation of HMMs using evolutionary strategy-based linear regression

    NASA Astrophysics Data System (ADS)

    Selouani, Sid-Ahmed; O'Shaughnessy, Douglas

    2002-05-01

    A new framework for speaker adaptation of continuous-density hidden Markov models (HMMs) is introduced. It aims to improve the robustness of speech recognizers by adapting HMM parameters to new conditions (e.g., from new speakers). It describes an optimization technique using an evolutionary strategy for linear regression-based spectral transformation. In classical iterative maximum likelihood linear regression (MLLR), a global transform matrix is estimated to make a general model better match particular target conditions. To permit adaptation on a small amount of data, a regression tree classification is performed. However, an important drawback of MLLR is that the number of regression classes is fixed. The new approach allows the degree of freedom of the global transform to be implicitly variable, as the evolutionary optimization permits the survival of only active classes. The fitness function is evaluated by the phoneme correctness through the evolution steps. The implementation requirements such as chromosome representation, selection function, genetic operators, and evaluation function have been chosen in order to lend more reliability to the global transformation matrix. Triphone experiments used the TIMIT and ARPA-RM1 databases. For new speakers, the new technique achieves 8 percent fewer word errors than the basic MLLR method.

  4. Genomewide Multiple-Loci Mapping in Experimental Crosses by Iterative Adaptive Penalized Regression

    PubMed Central

    Sun, Wei; Ibrahim, Joseph G.; Zou, Fei

    2010-01-01

    Genomewide multiple-loci mapping can be viewed as a challenging variable selection problem where the major objective is to select genetic markers related to a trait of interest. It is challenging because the number of genetic markers is large (often much larger than the sample size) and there is often strong linkage or linkage disequilibrium between markers. In this article, we developed two methods for genomewide multiple loci mapping: the Bayesian adaptive Lasso and the iterative adaptive Lasso. Compared with eight existing methods, the proposed methods have improved variable selection performance in both simulation and real data studies. The advantages of our methods come from the assignment of adaptive weights to different genetic makers and the iterative updating of these adaptive weights. The iterative adaptive Lasso is also computationally much more efficient than the commonly used marginal regression and stepwise regression methods. Although our methods are motivated by multiple-loci mapping, they are general enough to be applied to other variable selection problems. PMID:20157003

  5. Non polynomial B-splines

    NASA Astrophysics Data System (ADS)

    Laksâ, Arne

    2015-11-01

    B-splines are the de facto industrial standard for surface modelling in Computer Aided design. It is comparable to bend flexible rods of wood or metal. A flexible rod minimize the energy when bending, a third degree polynomial spline curve minimize the second derivatives. B-spline is a nice way of representing polynomial splines, it connect polynomial splines to corner cutting techniques, which induces many nice and useful properties. However, the B-spline representation can be expanded to something we can call general B-splines, i.e. both polynomial and non-polynomial splines. We will show how this expansion can be done, and the properties it induces, and examples of non-polynomial B-spline.

  6. Multivariate Spline Algorithms for CAGD

    NASA Technical Reports Server (NTRS)

    Boehm, W.

    1985-01-01

    Two special polyhedra present themselves for the definition of B-splines: a simplex S and a box or parallelepiped B, where the edges of S project into an irregular grid, while the edges of B project into the edges of a regular grid. More general splines may be found by forming linear combinations of these B-splines, where the three-dimensional coefficients are called the spline control points. Univariate splines are simplex splines, where s = 1, whereas splines over a regular triangular grid are box splines, where s = 2. Two simple facts render the development of the construction of B-splines: (1) any face of a simplex or a box is again a simplex or box but of lower dimension; and (2) any simplex or box can be easily subdivided into smaller simplices or boxes. The first fact gives a geometric approach to Mansfield-like recursion formulas that express a B-spline in B-splines of lower order, where the coefficients depend on x. By repeated recursion, the B-spline will be expressed as B-splines of order 1; i.e., piecewise constants. In the case of a simplex spline, the second fact gives a so-called insertion algorithm that constructs the new control points if an additional knot is inserted.

  7. RATIONAL SPLINE SUBROUTINES

    NASA Technical Reports Server (NTRS)

    Schiess, J. R.

    1994-01-01

    Scientific data often contains random errors that make plotting and curve-fitting difficult. The Rational-Spline Approximation with Automatic Tension Adjustment algorithm lead to a flexible, smooth representation of experimental data. The user sets the conditions for each consecutive pair of knots:(knots are user-defined divisions in the data set) to apply no tension; to apply fixed tension; or to determine tension with a tension adjustment algorithm. The user also selects the number of knots, the knot abscissas, and the allowed maximum deviations from line segments. The selection of these quantities depends on the actual data and on the requirements of a particular application. This program differs from the usual spline under tension in that it allows the user to specify different tension values between each adjacent pair of knots rather than a constant tension over the entire data range. The subroutines use an automatic adjustment scheme that varies the tension parameter for each interval until the maximum deviation of the spline from the line joining the knots is less than or equal to a user-specified amount. This procedure frees the user from the drudgery of adjusting individual tension parameters while still giving control over the local behavior of the spline The Rational Spline program was written completely in FORTRAN for implementation on a CYBER 850 operating under NOS. It has a central memory requirement of approximately 1500 words. The program was released in 1988.

  8. Clinical Trials: Spline Modeling is Wonderful for Nonlinear Effects.

    PubMed

    Cleophas, Ton J

    2016-01-01

    Traditionally, nonlinear relationships like the smooth shapes of airplanes, boats, and motor cars were constructed from scale models using stretched thin wooden strips, otherwise called splines. In the past decades, mechanical spline methods have been replaced with their mathematical counterparts. The objective of the study was to study whether spline modeling can adequately assess the relationships between exposure and outcome variables in a clinical trial and also to study whether it can detect patterns in a trial that are relevant but go unobserved with simpler regression models. A clinical trial assessing the effect of quantity of care on quality of care was used as an example. Spline curves consistent of 4 or 5 cubic functions were applied. SPSS statistical software was used for analysis. The spline curves of our data outperformed the traditional curves because (1) unlike the traditional curves, they did not miss the top quality of care given in either subgroup, (2) unlike the traditional curves, they, rightly, did not produce sinusoidal patterns, and (3) unlike the traditional curves, they provided a virtually 100% match of the original values. We conclude that (1) spline modeling can adequately assess the relationships between exposure and outcome variables in a clinical trial; (2) spline modeling can detect patterns in a trial that are relevant but may go unobserved with simpler regression models; (3) in clinical research, spline modeling has great potential given the presence of many nonlinear effects in this field of research and given its sophisticated mathematical refinement to fit any nonlinear effect in the mostly accurate way; and (4) spline modeling should enable to improve making predictions from clinical research for the benefit of health decisions and health care. We hope that this brief introduction to spline modeling will stimulate clinical investigators to start using this wonderful method. PMID:23689089

  9. Electronic monitoring device event modelling on an individual-subject basis using adaptive Poisson regression.

    PubMed

    Knafl, George J; Fennie, Kristopher P; Bova, Carol; Dieckhaus, Kevin; Williams, Ann B

    2004-03-15

    An adaptive approach to Poisson regression modelling is presented for analysing event data from electronic devices monitoring medication-taking. The emphasis is on applying this approach to data for individual subjects although it also applies to data for multiple subjects. This approach provides for visualization of adherence patterns as well as for objective comparison of actual device use with prescribed medication-taking. Example analyses are presented using data on openings of electronic pill bottle caps monitoring adherence of subjects with HIV undergoing highly active antiretroviral therapies. The modelling approach consists of partitioning the observation period, computing grouped event counts/rates for intervals in this partition, and modelling these event counts/rates in terms of elapsed time after entry into the study using Poisson regression. These models are based on adaptively selected sets of power transforms of elapsed time determined by rule-based heuristic search through arbitrary sets of parametric models, thereby effectively generating a smooth non-parametric regression fit to the data. Models are compared using k-fold likelihood cross-validation. PMID:14981675

  10. Better prediction by use of co-data: adaptive group-regularized ridge regression.

    PubMed

    van de Wiel, Mark A; Lien, Tonje G; Verlaat, Wina; van Wieringen, Wessel N; Wilting, Saskia M

    2016-02-10

    For many high-dimensional studies, additional information on the variables, like (genomic) annotation or external p-values, is available. In the context of binary and continuous prediction, we develop a method for adaptive group-regularized (logistic) ridge regression, which makes structural use of such 'co-data'. Here, 'groups' refer to a partition of the variables according to the co-data. We derive empirical Bayes estimates of group-specific penalties, which possess several nice properties: (i) They are analytical. (ii) They adapt to the informativeness of the co-data for the data at hand. (iii) Only one global penalty parameter requires tuning by cross-validation. In addition, the method allows use of multiple types of co-data at little extra computational effort. We show that the group-specific penalties may lead to a larger distinction between 'near-zero' and relatively large regression parameters, which facilitates post hoc variable selection. The method, termed GRridge, is implemented in an easy-to-use R-package. It is demonstrated on two cancer genomics studies, which both concern the discrimination of precancerous cervical lesions from normal cervix tissues using methylation microarray data. For both examples, GRridge clearly improves the predictive performances of ordinary logistic ridge regression and the group lasso. In addition, we show that for the second study, the relatively good predictive performance is maintained when selecting only 42 variables. PMID:26365903

  11. Interchangeable spline reference guide

    SciTech Connect

    Dolin, R.M.

    1994-05-01

    The WX-Division Integrated Software Tools (WIST) Team evolved from two previous committees, First was the W78 Solid Modeling Pilot Project`s Spline Subcommittee, which later evolved into the Vv`X-Division Spline Committee. The mission of the WIST team is to investigate current CAE engineering processes relating to complex geometry and to develop methods for improving those processes. Specifically, the WIST team is developing technology that allows the Division to use multiple spline representations. We are also updating the contour system (CONSYS) data base to take full advantage of the Division`s expanding electronic engineering process. Both of these efforts involve developing interfaces to commercial CAE systems and writing new software. The WIST team is comprised of members from V;X-11, -12 and 13. This {open_quotes}cross-functional{close_quotes} approach to software development is somewhat new in the Division so an effort is being made to formalize our processes and assure quality at each phase of development. Chapter one represents a theory manual and is one phase of the formal process. The theory manual is followed by a software requirements document, specification document, software verification and validation documents. The purpose of this guide is to present the theory underlying the interchangeable spline technology and application. Verification and validation test results are also presented for proof of principal.

  12. Global VTEC-modelling in near real-time based on space geodetic techniques, adapted B-spline expansions and Kalman-filtering including observations of the Sun's radiation

    NASA Astrophysics Data System (ADS)

    Börger, Klaus; Schmidt, Michael; Dettmering, Denise; Limberger, Marco; Erdogan, Eren; Seitz, Florian; Brandert, Sylvia; Görres, Barbara; Kersten, Wilhelm; Bothmer, Volker; Hinrichs, Johannes; Venzmer, Malte; Mrotzek, Niclas

    2016-04-01

    Today, the observations of space geodetic techniques are usually available with a rather low latency which applies to space missions observing the solar terrestrial environment, too. Therefore, we can use all these measurements in near real-time to compute and to provide ionosphere information, e.g. the vertical total electron content (VTEC). GSSAC and BGIC support a project aiming at a service for providing ionosphere information. This project is called OPTIMAP, meaning "Operational Tool for Ionosphere Mapping and Prediction"; the scientific work is mainly done by the German Geodetic Research Institute of the Technical University Munich (DGFI-TUM) and the Institute for Astrophysics of the University of Goettingen (IAG). The OPTIMAP strategy for providing ionosphere target quantities of high quality, such as VTEC or the electron density, includes mathematical approaches and tools allowing for the model adaptation to the real observational scenario as a significant improvement w.r.t. the traditional well-established methods. For example, OPTIMAP combines different observation types such as GNSS (GPS, GLONASS), Satellite Altimetry (Jason-2), DORIS as well as radio-occultation measurements (FORMOSAT#3/COSMIC). All these observations run into a Kalman-filter to compute global ionosphere maps, i.e. VTEC, for the current instant of time and as a forecast for a couple of subsequent days. Mathematically, the global VTEC is set up as a series expansion in terms of two-dimensional basis functions defined as tensor products of trigonometric B-splines for longitude and polynomial B-splines for latitude. Compared to the classical spherical harmonics, B-splines have a localizing character and, therefore, can handle an inhomogeneous data distribution properly. Finally, B-splines enable a so-called multi-resolution-representation (MRR) enabling the combination of global and regional modelling approaches. In addition to the geodetic measurements, Sun observations are pre

  13. Performance verification of bivariate regressive adaptive index for structural health monitoring

    NASA Astrophysics Data System (ADS)

    Su, Su; Kijewski-Correa, Tracy

    2007-04-01

    This study focuses on data-driven methods for structural health monitoring and introduces a Bivariate Regressive Adaptive INdex (BRAIN) for damage detection in a decentralized, wireless sensor network. BRAIN utilizes a dynamic damage sensitive feature (DSF) that automatically adapts to the data set, extracting the most damage sensitive model features, which vary with location, damage severity, loading condition and model type. This data-driven feature is key to providing the most flexible damage sensitive feature incorporating all available data for a given application to enhance reliability by including heterogeneous sensor arrays. This study will first evaluate several regressive-type models used for time-series damage detection, including common homogeneous formats and newly proposed heterogeneous descriptors and then demonstrate the performance of the newly proposed dynamic DSF against a comparable static DSF. Performance will be validated by documenting their damage success rates on repeated simulations of randomly-excited thin beams with minor levels of damage. It will be shown that BRAIN dramatically increases the detection capabilities over static, homogeneous damage detection frameworks.

  14. Regression-based adaptive sparse polynomial dimensional decomposition for sensitivity analysis

    NASA Astrophysics Data System (ADS)

    Tang, Kunkun; Congedo, Pietro; Abgrall, Remi

    2014-11-01

    Polynomial dimensional decomposition (PDD) is employed in this work for global sensitivity analysis and uncertainty quantification of stochastic systems subject to a large number of random input variables. Due to the intimate structure between PDD and Analysis-of-Variance, PDD is able to provide simpler and more direct evaluation of the Sobol' sensitivity indices, when compared to polynomial chaos (PC). Unfortunately, the number of PDD terms grows exponentially with respect to the size of the input random vector, which makes the computational cost of the standard method unaffordable for real engineering applications. In order to address this problem of curse of dimensionality, this work proposes a variance-based adaptive strategy aiming to build a cheap meta-model by sparse-PDD with PDD coefficients computed by regression. During this adaptive procedure, the model representation by PDD only contains few terms, so that the cost to resolve repeatedly the linear system of the least-square regression problem is negligible. The size of the final sparse-PDD representation is much smaller than the full PDD, since only significant terms are eventually retained. Consequently, a much less number of calls to the deterministic model is required to compute the final PDD coefficients.

  15. An adaptive online learning approach for Support Vector Regression: Online-SVR-FID

    NASA Astrophysics Data System (ADS)

    Liu, Jie; Zio, Enrico

    2016-08-01

    Support Vector Regression (SVR) is a popular supervised data-driven approach for building empirical models from available data. Like all data-driven methods, under non-stationary environmental and operational conditions it needs to be provided with adaptive learning capabilities, which might become computationally burdensome with large datasets cumulating dynamically. In this paper, a cost-efficient online adaptive learning approach is proposed for SVR by combining Feature Vector Selection (FVS) and Incremental and Decremental Learning. The proposed approach adaptively modifies the model only when different pattern drifts are detected according to proposed criteria. Two tolerance parameters are introduced in the approach to control the computational complexity, reduce the influence of the intrinsic noise in the data and avoid the overfitting problem of SVR. Comparisons of the prediction results is made with other online learning approaches e.g. NORMA, SOGA, KRLS, Incremental Learning, on several artificial datasets and a real case study concerning time series prediction based on data recorded on a component of a nuclear power generation system. The performance indicators MSE and MARE computed on the test dataset demonstrate the efficiency of the proposed online learning method.

  16. Locally Refined Splines Representation for Geospatial Big Data

    NASA Astrophysics Data System (ADS)

    Dokken, T.; Skytt, V.; Barrowclough, O.

    2015-08-01

    When viewed from distance, large parts of the topography of landmasses and the bathymetry of the sea and ocean floor can be regarded as a smooth background with local features. Consequently a digital elevation model combining a compact smooth representation of the background with locally added features has the potential of providing a compact and accurate representation for topography and bathymetry. The recent introduction of Locally Refined B-Splines (LR B-splines) allows the granularity of spline representations to be locally adapted to the complexity of the smooth shape approximated. This allows few degrees of freedom to be used in areas with little variation, while adding extra degrees of freedom in areas in need of more modelling flexibility. In the EU fp7 Integrating Project IQmulus we exploit LR B-splines for approximating large point clouds representing bathymetry of the smooth sea and ocean floor. A drastic reduction is demonstrated in the bulk of the data representation compared to the size of input point clouds. The representation is very well suited for exploiting the power of GPUs for visualization as the spline format is transferred to the GPU and the triangulation needed for the visualization is generated on the GPU according to the viewing parameters. The LR B-splines are interoperable with other elevation model representations such as LIDAR data, raster representations and triangulated irregular networks as these can be used as input to the LR B-spline approximation algorithms. Output to these formats can be generated from the LR B-spline applications according to the resolution criteria required. The spline models are well suited for change detection as new sensor data can efficiently be compared to the compact LR B-spline representation.

  17. Wavelets based on Hermite cubic splines

    NASA Astrophysics Data System (ADS)

    Cvejnová, Daniela; Černá, Dana; Finěk, Václav

    2016-06-01

    In 2000, W. Dahmen et al. designed biorthogonal multi-wavelets adapted to the interval [0,1] on the basis of Hermite cubic splines. In recent years, several more simple constructions of wavelet bases based on Hermite cubic splines were proposed. We focus here on wavelet bases with respect to which both the mass and stiffness matrices are sparse in the sense that the number of nonzero elements in any column is bounded by a constant. Then, a matrix-vector multiplication in adaptive wavelet methods can be performed exactly with linear complexity for any second order differential equation with constant coefficients. In this contribution, we shortly review these constructions and propose a new wavelet which leads to improved Riesz constants. Wavelets have four vanishing wavelet moments.

  18. Bivariate regressive adaptive index for structural health monitoring: performance assessment and experimental verification

    NASA Astrophysics Data System (ADS)

    Su, Su; Kijewski-Correa, Tracy; Pando Balandra, Juan Francisco

    2009-03-01

    This study focuses on embeddable algorithms that operate within multi-scale wireless sensor networks for damage detection in civil infrastructure systems, and in specific, the Bivariate Regressive Adaptive INdex (BRAIN) to detect damage in structures by examining the changes in regressive coefficients of time series models. As its name suggests, BRAIN exploits heterogeneous sensor arrays by a data-driven damage feature (DSF) to enhance detection capability through the use of two types of response data, each with its own unique sensitivities to damage. While previous studies have shown that BRAIN offers more reliable damage detection, a number of factors contributing to its performance are explored herein, including observability, damage proximity/severity, and relative signal strength. These investigations also include an experimental program to determine if performance is maintained when implementing the approaches in physical systems. The results of these investigations will be used to further verify that the use of heterogeneous sensing enhances overall detection capability of such data-driven damage metrics.

  19. Spline screw payload fastening system

    NASA Astrophysics Data System (ADS)

    Vranish, John M.

    1993-09-01

    A system for coupling an orbital replacement unit (ORU) to a space station structure via the actions of a robot and/or astronaut is described. This system provides mechanical and electrical connections both between the ORU and the space station structure and between the ORU and the ORU and the robot/astronaut hand tool. Alignment and timing features ensure safe, sure handling and precision coupling. This includes a first female type spline connector selectively located on the space station structure, a male type spline connector positioned on the orbital replacement unit so as to mate with and connect to the first female type spline connector, and a second female type spline connector located on the orbital replacement unit. A compliant drive rod interconnects the second female type spline connector and the male type spline connector. A robotic special end effector is used for mating with and driving the second female type spline connector. Also included are alignment tabs exteriorally located on the orbital replacement unit for berthing with the space station structure. The first and second female type spline connectors each include a threaded bolt member having a captured nut member located thereon which can translate up and down the bolt but are constrained from rotation thereabout, the nut member having a mounting surface with at least one first type electrical connector located on the mounting surface for translating with the nut member. At least one complementary second type electrical connector on the orbital replacement unit mates with at least one first type electrical connector on the mounting surface of the nut member. When the driver on the robotic end effector mates with the second female type spline connector and rotates, the male type spline connector and the first female type spline connector lock together, the driver and the second female type spline connector lock together, and the nut members translate up the threaded bolt members carrying the

  20. Spline screw payload fastening system

    NASA Astrophysics Data System (ADS)

    Vranish, John M.

    1992-09-01

    A system for coupling an orbital replacement unit (ORU) to a space station structure via the actions of a robot and/or astronaut is described. This system provides mechanical and electrical connections both between the ORU and the space station structure and between the ORU and the ORU and the robot/astronaut hand tool. Alignment and timing features ensure safe, sure handling and precision coupling. This includes a first female type spline connector selectively located on the space station structure, a male type spline connector positioned on the orbital replacement unit so as to mate with and connect to the first female type spline connector, and a second female type spline connector located on the orbital replacement unit. A compliant drive rod interconnects the second female type spline connector and the male type spline connector. A robotic special end effector is used for mating with and driving the second female type spline connector. Also included are alignment tabs exteriorally located on the orbital replacement unit for berthing with the space station structure. The first and second female type spline connectors each include a threaded bolt member having a captured nut member located thereon which can translate up and down the bolt but are constrained from rotation thereabout, the nut member having a mounting surface with at least one first type electrical connector located on the mounting surface for translating with the nut member. At least one complementary second type electrical connector on the orbital replacement unit mates with at least one first type electrical connector on the mounting surface of the nut member. When the driver on the robotic end effector mates with the second female type spline connector and rotates, the male type spline connector and the first female type spline connector lock together, the driver and the second female type spline connector lock together, and the nut members translate up the threaded bolt members carrying the

  1. Spline screw payload fastening system

    NASA Technical Reports Server (NTRS)

    Vranish, John M. (Inventor)

    1993-01-01

    A system for coupling an orbital replacement unit (ORU) to a space station structure via the actions of a robot and/or astronaut is described. This system provides mechanical and electrical connections both between the ORU and the space station structure and between the ORU and the ORU and the robot/astronaut hand tool. Alignment and timing features ensure safe, sure handling and precision coupling. This includes a first female type spline connector selectively located on the space station structure, a male type spline connector positioned on the orbital replacement unit so as to mate with and connect to the first female type spline connector, and a second female type spline connector located on the orbital replacement unit. A compliant drive rod interconnects the second female type spline connector and the male type spline connector. A robotic special end effector is used for mating with and driving the second female type spline connector. Also included are alignment tabs exteriorally located on the orbital replacement unit for berthing with the space station structure. The first and second female type spline connectors each include a threaded bolt member having a captured nut member located thereon which can translate up and down the bolt but are constrained from rotation thereabout, the nut member having a mounting surface with at least one first type electrical connector located on the mounting surface for translating with the nut member. At least one complementary second type electrical connector on the orbital replacement unit mates with at least one first type electrical connector on the mounting surface of the nut member. When the driver on the robotic end effector mates with the second female type spline connector and rotates, the male type spline connector and the first female type spline connector lock together, the driver and the second female type spline connector lock together, and the nut members translate up the threaded bolt members carrying the

  2. Using parametric {ital B} splines to fit specular reflectivities

    SciTech Connect

    Berk, N.F.; Majkrzak, C.F.

    1995-05-01

    Parametric {ital B}-spline curves offer a flexible and appropriate mathematical description of scattering length density profiles in specular reflectivity analysis. Profiles combining smooth and sharp features can be defined in low dimensional representations using control points in the density-depth plane which provide graded local influence on profile shape. These profiles exist in vector spaces defined by {ital B}-spline order and parameter knot set, which can be systematically densified during analysis. Such profiles can easily be rendered as adaptive histograms for reflectivity computation. {ital B}-spline order can be chosen to accommodate the asymptotic (large-{ital Q}) behavior indicated by reflectivity data. We describe an interactive fitting strategy in which the Nelder and Mead simplex method is used in the {ital B}-spline control point space to guide the discovery of profiles that can produce given reflectivity data. Examples using actual and simulated spectra are discussed.

  3. Surface deformation over flexible joints using spline blending techniques

    NASA Astrophysics Data System (ADS)

    Haavardsholm, Birgitte; Bratlie, Jostein; Dalmo, Rune

    2014-12-01

    Skinning over a skeleton joint is the process of skin deformation based on joint transformation. Popular geometric skinning techniques include implicit linear blending and dual quaternions. Generalized expo-rational B-splines (GERBS) is a blending type spline construction where local functions at each knot are blended by Ck-smooth basis functions. A smooth skinning surface can be constructed over a transformable skeleton joint by combining various types of local surface constructions and applying local Hermite interpolation. Compared to traditional spline methods, increased flexibility and local control with respect to surface deformation can be achieved using the GERBS blending construction. We present a method using a blending-type spline surface for skinning over a flexible joint, where local geometry is individually adapted to achieve natural skin deformation based on skeleton transformations..

  4. Modeling and simulation of output power of a high-power He-SrBr2 laser by using multivariate adaptive regression splines

    NASA Astrophysics Data System (ADS)

    Iliev, I. P.; Gocheva-Ilieva, S. G.

    2013-02-01

    Due to advancement in computing technology researchers are focusing onto novel predictive models and techniques for improving the design and performance of the devices. This study examines a recently developed high-powered SrBr2 laser excited in a nanosecond pulse longitudinal He-SrBr2 discharge. Based on the accumulated experiment data, a new approach is proposed for determining the relationship between laser output power and basic laser characteristics: geometric design, supplied electric power, helium pressure, etc. Piece-wise linear and nonlinear statistical models have been built with the help of the flexible predictive MARS technique. It is shown that the best nonlinear MARS model containing second degree terms provides the best description of the examined data, demonstrating a coefficient of determination of over 99%. The resulting theoretical models are used to estimate and predict the experiment as well as to analyze the local behavior of the relationships between laser output power and input laser characteristics. The second order model is applied to the design and optimization of the laser in order to enhance laser generation.

  5. Cross-sectional time series and multivariate adaptive regression splines models using accelerometry and heart rate predict energy expenditure of preschoolers

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Prediction equations of energy expenditure (EE) using accelerometers and miniaturized heart rate (HR) monitors have been developed in older children and adults but not in preschool-aged children. Because the relationships between accelerometer counts (ACs), HR, and EE are confounded by growth and ma...

  6. Mathematical research on spline functions

    NASA Technical Reports Server (NTRS)

    Horner, J. M.

    1973-01-01

    One approach in spline functions is to grossly estimate the integrand in J and exactly solve the resulting problem. If the integrand in J is approximated by Y" squared, the resulting problem lends itself to exact solution, the familiar cubic spline. Another approach is to investigate various approximations to the integrand in J and attempt to solve the resulting problems. The results are described.

  7. Real-time detection of generic objects using objectness estimation and locally adaptive regression kernels matching

    NASA Astrophysics Data System (ADS)

    Zheng, Zhihui; Gao, Lei; Xiao, Liping; Zhou, Bin; Gao, Shibo

    2015-12-01

    Our purpose is to develop a detection algorithm capable of searching for generic interest objects in real time without large training sets and long-time training stages. Instead of the classical sliding window object detection paradigm, we employ an objectness measure to produce a small set of candidate windows efficiently using Binarized Normed Gradients and a Laplacian of Gaussian-like filter. We then extract Locally Adaptive Regression Kernels (LARKs) as descriptors both from a model image and the candidate windows which measure the likeness of a pixel to its surroundings. Using a matrix cosine similarity measure, the algorithm yields a scalar resemblance map, indicating the likelihood of similarity between the model and the candidate windows. By employing nonparametric significance tests and non-maxima suppression, we detect the presence of objects similar to the given model. Experiments show that the proposed detection paradigm can automatically detect the presence, the number, as well as location of similar objects to the given model. The high quality and efficiency of our method make it suitable for real time multi-category object detection applications.

  8. An adaptive regression mixture model for fMRI cluster analysis.

    PubMed

    Oikonomou, Vangelis P; Blekas, Konstantinos

    2013-04-01

    Functional magnetic resonance imaging (fMRI) has become one of the most important techniques for studying the human brain in action. A common problem in fMRI analysis is the detection of activated brain regions in response to an experimental task. In this work we propose a novel clustering approach for addressing this issue using an adaptive regression mixture model. The main contribution of our method is the employment of both spatial and sparse properties over the body of the mixture model. Thus, the clustering approach is converted into a maximum a posteriori estimation approach, where the expectation-maximization algorithm is applied for model training. Special care is also given to estimate the kernel scalar parameter per cluster of the design matrix by presenting a multi-kernel scheme. In addition an incremental training procedure is presented so as to make the approach independent on the initialization of the model parameters. The latter also allows us to introduce an efficient stopping criterion of the process for determining the optimum brain activation area. To assess the effectiveness of our method, we have conducted experiments with simulated and real fMRI data, where we have demonstrated its ability to produce improved performance and functional activation detection capabilities. PMID:23047865

  9. Theory, computation, and application of exponential splines

    NASA Technical Reports Server (NTRS)

    Mccartin, B. J.

    1981-01-01

    A generalization of the semiclassical cubic spline known in the literature as the exponential spline is discussed. In actuality, the exponential spline represents a continuum of interpolants ranging from the cubic spline to the linear spline. A particular member of this family is uniquely specified by the choice of certain tension parameters. The theoretical underpinnings of the exponential spline are outlined. This development roughly parallels the existing theory for cubic splines. The primary extension lies in the ability of the exponential spline to preserve convexity and monotonicity present in the data. Next, the numerical computation of the exponential spline is discussed. A variety of numerical devices are employed to produce a stable and robust algorithm. An algorithm for the selection of tension parameters that will produce a shape preserving approximant is developed. A sequence of selected curve-fitting examples are presented which clearly demonstrate the advantages of exponential splines over cubic splines.

  10. Laser-induced Breakdown spectroscopy quantitative analysis method via adaptive analytical line selection and relevance vector machine regression model

    NASA Astrophysics Data System (ADS)

    Yang, Jianhong; Yi, Cancan; Xu, Jinwu; Ma, Xianghong

    2015-05-01

    A new LIBS quantitative analysis method based on analytical line adaptive selection and Relevance Vector Machine (RVM) regression model is proposed. First, a scheme of adaptively selecting analytical line is put forward in order to overcome the drawback of high dependency on a priori knowledge. The candidate analytical lines are automatically selected based on the built-in characteristics of spectral lines, such as spectral intensity, wavelength and width at half height. The analytical lines which will be used as input variables of regression model are determined adaptively according to the samples for both training and testing. Second, an LIBS quantitative analysis method based on RVM is presented. The intensities of analytical lines and the elemental concentrations of certified standard samples are used to train the RVM regression model. The predicted elemental concentration analysis results will be given with a form of confidence interval of probabilistic distribution, which is helpful for evaluating the uncertainness contained in the measured spectra. Chromium concentration analysis experiments of 23 certified standard high-alloy steel samples have been carried out. The multiple correlation coefficient of the prediction was up to 98.85%, and the average relative error of the prediction was 4.01%. The experiment results showed that the proposed LIBS quantitative analysis method achieved better prediction accuracy and better modeling robustness compared with the methods based on partial least squares regression, artificial neural network and standard support vector machine.

  11. Aerodynamic influence coefficient method using singularity splines.

    NASA Technical Reports Server (NTRS)

    Mercer, J. E.; Weber, J. A.; Lesferd, E. P.

    1973-01-01

    A new numerical formulation with computed results, is presented. This formulation combines the adaptability to complex shapes offered by paneling schemes with the smoothness and accuracy of the loading function methods. The formulation employs a continuous distribution of singularity strength over a set of panels on a paneled wing. The basic distributions are independent, and each satisfies all of the continuity conditions required of the final solution. These distributions are overlapped both spanwise and chordwise (termed 'spline'). Boundary conditions are satisfied in a least square error sense over the surface using a finite summing technique to approximate the integral.

  12. A Rapid Model Adaptation Technique for Emotional Speech Recognition with Style Estimation Based on Multiple-Regression HMM

    NASA Astrophysics Data System (ADS)

    Ijima, Yusuke; Nose, Takashi; Tachibana, Makoto; Kobayashi, Takao

    In this paper, we propose a rapid model adaptation technique for emotional speech recognition which enables us to extract paralinguistic information as well as linguistic information contained in speech signals. This technique is based on style estimation and style adaptation using a multiple-regression HMM (MRHMM). In the MRHMM, the mean parameters of the output probability density function are controlled by a low-dimensional parameter vector, called a style vector, which corresponds to a set of the explanatory variables of the multiple regression. The recognition process consists of two stages. In the first stage, the style vector that represents the emotional expression category and the intensity of its expressiveness for the input speech is estimated on a sentence-by-sentence basis. Next, the acoustic models are adapted using the estimated style vector, and then standard HMM-based speech recognition is performed in the second stage. We assess the performance of the proposed technique in the recognition of simulated emotional speech uttered by both professional narrators and non-professional speakers.

  13. Adaptive multitrack reconstruction for particle trajectories based on fuzzy c-regression models

    NASA Astrophysics Data System (ADS)

    Niu, Li-Bo; Li, Yu-Lan; Huang, Meng; Fu, Jian-Qiang; He, Bin; Li, Yuan-Jing

    2015-03-01

    In this paper, an approach to straight and circle track reconstruction is presented, which is suitable for particle trajectories in an homogenous magnetic field (or 0 T) or Cherenkov rings. The method is based on fuzzy c-regression models, where the number of the models stands for the track number. The approximate number of tracks and a rough evaluation of the track parameters given by Hough transform are used to initiate the fuzzy c-regression models. The technique effectively represents a merger between track candidates finding and parameters fitting. The performance of this approach is tested by some simulated data under various scenarios. Results show that this technique is robust and could provide very accurate results efficiently. Supported by National Natural Science Foundation of China (11275109)

  14. Aerodynamic influence coefficient method using singularity splines

    NASA Technical Reports Server (NTRS)

    Mercer, J. E.; Weber, J. A.; Lesferd, E. P.

    1974-01-01

    A numerical lifting surface formulation, including computed results for planar wing cases is presented. This formulation, referred to as the vortex spline scheme, combines the adaptability to complex shapes offered by paneling schemes with the smoothness and accuracy of loading function methods. The formulation employes a continuous distribution of singularity strength over a set of panels on a paneled wing. The basic distributions are independent, and each satisfied all the continuity conditions required of the final solution. These distributions are overlapped both spanwise and chordwise. Boundary conditions are satisfied in a least square error sense over the surface using a finite summing technique to approximate the integral. The current formulation uses the elementary horseshoe vortex as the basic singularity and is therefore restricted to linearized potential flow. As part of the study, a non planar development was considered, but the numerical evaluation of the lifting surface concept was restricted to planar configurations. Also, a second order sideslip analysis based on an asymptotic expansion was investigated using the singularity spline formulation.

  15. A Nonlinear Adaptive Beamforming Algorithm Based on Least Squares Support Vector Regression

    PubMed Central

    Wang, Lutao; Jin, Gang; Li, Zhengzhou; Xu, Hongbin

    2012-01-01

    To overcome the performance degradation in the presence of steering vector mismatches, strict restrictions on the number of available snapshots, and numerous interferences, a novel beamforming approach based on nonlinear least-square support vector regression machine (LS-SVR) is derived in this paper. In this approach, the conventional linearly constrained minimum variance cost function used by minimum variance distortionless response (MVDR) beamformer is replaced by a squared-loss function to increase robustness in complex scenarios and provide additional control over the sidelobe level. Gaussian kernels are also used to obtain better generalization capacity. This novel approach has two highlights, one is a recursive regression procedure to estimate the weight vectors on real-time, the other is a sparse model with novelty criterion to reduce the final size of the beamformer. The analysis and simulation tests show that the proposed approach offers better noise suppression capability and achieve near optimal signal-to-interference-and-noise ratio (SINR) with a low computational burden, as compared to other recently proposed robust beamforming techniques.

  16. Spline interpolation on unbounded domains

    NASA Astrophysics Data System (ADS)

    Skeel, Robert D.

    2016-06-01

    Spline interpolation is a splendid tool for multiscale approximation on unbounded domains. In particular, it is well suited for use by the multilevel summation method (MSM) for calculating a sum of pairwise interactions for a large set of particles in linear time. Outlined here is an algorithm for spline interpolation on unbounded domains that is efficient and elegant though not so simple. Further gains in efficiency are possible via quasi-interpolation, which compromises collocation but with minimal loss of accuracy. The MSM, which may also be of value for continuum models, embodies most of the best features of both hierarchical clustering methods (tree methods, fast multipole methods, hierarchical matrix methods) and FFT-based 2-level methods (particle-particle particle-mesh methods, particle-mesh Ewald methods).

  17. Spline screw multiple rotations mechanism

    NASA Technical Reports Server (NTRS)

    Vranish, John M. (Inventor)

    1993-01-01

    A system for coupling two bodies together and for transmitting torque from one body to another with mechanical timing and sequencing is reported. The mechanical timing and sequencing is handled so that the following criteria are met: (1) the bodies are handled in a safe manner and nothing floats loose in space, (2) electrical connectors are engaged as long as possible so that the internal processes can be monitored throughout by sensors, and (3) electrical and mechanical power and signals are coupled. The first body has a splined driver for providing the input torque. The second body has a threaded drive member capable of rotation and limited translation. The embedded drive member will mate with and fasten to the splined driver. The second body has an embedded bevel gear member capable of rotation and limited translation. This bevel gear member is coaxial with the threaded drive member. A compression spring provides a preload on the rotating threaded member, and a thrust bearing is used for limiting the translation of the bevel gear member so that when the bevel gear member reaches the upward limit of its translation the two bodies are fully coupled and the bevel gear member then rotates due to the input torque transmitted from the splined driver through the threaded drive member to the bevel gear member. An output bevel gear with an attached output drive shaft is embedded in the second body and meshes with the threaded rotating bevel gear member to transmit the input torque to the output drive shaft.

  18. Spline screw multiple rotations mechanism

    NASA Astrophysics Data System (ADS)

    Vranish, John M.

    1993-12-01

    A system for coupling two bodies together and for transmitting torque from one body to another with mechanical timing and sequencing is reported. The mechanical timing and sequencing is handled so that the following criteria are met: (1) the bodies are handled in a safe manner and nothing floats loose in space, (2) electrical connectors are engaged as long as possible so that the internal processes can be monitored throughout by sensors, and (3) electrical and mechanical power and signals are coupled. The first body has a splined driver for providing the input torque. The second body has a threaded drive member capable of rotation and limited translation. The embedded drive member will mate with and fasten to the splined driver. The second body has an embedded bevel gear member capable of rotation and limited translation. This bevel gear member is coaxial with the threaded drive member. A compression spring provides a preload on the rotating threaded member, and a thrust bearing is used for limiting the translation of the bevel gear member so that when the bevel gear member reaches the upward limit of its translation the two bodies are fully coupled and the bevel gear member then rotates due to the input torque transmitted from the splined driver through the threaded drive member to the bevel gear member. An output bevel gear with an attached output drive shaft is embedded in the second body and meshes with the threaded rotating bevel gear member to transmit the input torque to the output drive shaft.

  19. [A Brillouin Scattering Spectrum Feature Extraction Based on Flies Optimization Algorithm with Adaptive Mutation and Generalized Regression Neural Network].

    PubMed

    Zhang, Yan-jun; Liu, Wen-zhe; Fu, Xing-hu; Bi, Wei-hong

    2015-10-01

    According to the high precision extracting characteristics of scattering spectrum in Brillouin optical time domain reflection optical fiber sensing system, this paper proposes a new algorithm based on flies optimization algorithm with adaptive mutation and generalized regression neural network. The method takes advantages of the generalized regression neural network which has the ability of the approximation ability, learning speed and generalization of the model. Moreover, by using the strong search ability of flies optimization algorithm with adaptive mutation, it can enhance the learning ability of the neural network. Thus the fitting degree of Brillouin scattering spectrum and the extraction accuracy of frequency shift is improved. Model of actual Brillouin spectrum are constructed by Gaussian white noise on theoretical spectrum, whose center frequency is 11.213 GHz and the linewidths are 40-50, 30-60 and 20-70 MHz, respectively. Comparing the algorithm with the Levenberg-Marquardt fitting method based on finite element analysis, hybrid algorithm particle swarm optimization, Levenberg-Marquardt and the least square method, the maximum frequency shift error of the new algorithm is 0.4 MHz, the fitting degree is 0.991 2 and the root mean square error is 0.024 1. The simulation results show that the proposed algorithm has good fitting degree and minimum absolute error. Therefore, the algorithm can be used on distributed optical fiber sensing system based on Brillouin optical time domain reflection, which can improve the fitting of Brillouin scattering spectrum and the precision of frequency shift extraction effectively. PMID:26904844

  20. A novel method of target recognition based on 3D-color-space locally adaptive regression kernels model

    NASA Astrophysics Data System (ADS)

    Liu, Jiaqi; Han, Jing; Zhang, Yi; Bai, Lianfa

    2015-10-01

    Locally adaptive regression kernels model can describe the edge shape of images accurately and graphic trend of images integrally, but it did not consider images' color information while the color is an important element of an image. Therefore, we present a novel method of target recognition based on 3-D-color-space locally adaptive regression kernels model. Different from the general additional color information, this method directly calculate the local similarity features of 3-D data from the color image. The proposed method uses a few examples of an object as a query to detect generic objects with incompact, complex and changeable shapes. Our method involves three phases: First, calculating the novel color-space descriptors from the RGB color space of query image which measure the likeness of a voxel to its surroundings. Salient features which include spatial- dimensional and color -dimensional information are extracted from said descriptors, and simplifying them to construct a non-similar local structure feature set of the object class by principal components analysis (PCA). Second, we compare the salient features with analogous features from the target image. This comparison is done using a matrix generalization of the cosine similarity measure. Then the similar structures in the target image are obtained using local similarity structure statistical matching. Finally, we use the method of non-maxima suppression in the similarity image to extract the object position and mark the object in the test image. Experimental results demonstrate that our approach is effective and accurate in improving the ability to identify targets.

  1. Stochastic dynamic models and Chebyshev splines

    PubMed Central

    Fan, Ruzong; Zhu, Bin; Wang, Yuedong

    2015-01-01

    In this article, we establish a connection between a stochastic dynamic model (SDM) driven by a linear stochastic differential equation (SDE) and a Chebyshev spline, which enables researchers to borrow strength across fields both theoretically and numerically. We construct a differential operator for the penalty function and develop a reproducing kernel Hilbert space (RKHS) induced by the SDM and the Chebyshev spline. The general form of the linear SDE allows us to extend the well-known connection between an integrated Brownian motion and a polynomial spline to a connection between more complex diffusion processes and Chebyshev splines. One interesting special case is connection between an integrated Ornstein–Uhlenbeck process and an exponential spline. We use two real data sets to illustrate the integrated Ornstein–Uhlenbeck process model and exponential spline model and show their estimates are almost identical. PMID:26045632

  2. Eye regression in blind Astyanax cavefish may facilitate the evolution of an adaptive behavior and its sensory receptors.

    PubMed

    Borowsky, Richard

    2013-01-01

    The forces driving the evolutionary loss or simplification of traits such as vision and pigmentation in cave animals are still debated. Three alternative hypotheses are direct selection against the trait, genetic drift, and indirect selection due to antagonistic pleiotropy. Recent work establishes that Astyanax cavefish exhibit vibration attraction behavior (VAB), a presumed behavioral adaptation to finding food in the dark not exhibited by surface fish. Genetic analysis revealed two regions in the genome with quantitative trait loci (QTL) for both VAB and eye size. These observations were interpreted as genetic evidence that selection for VAB indirectly drove eye regression through antagonistic pleiotropy and, further, that this is a general mechanism to account for regressive evolution. These conclusions are unsupported by the data; the analysis fails to establish pleiotropy and ignores the numerous other QTL that map to, and potentially interact, in the same regions. It is likely that all three forces drive evolutionary change. We will be able to distinguish among them in individual cases only when we have identified the causative alleles and characterized their effects. PMID:23844714

  3. Isogeometric methods for computational electromagnetics: B-spline and T-spline discretizations

    NASA Astrophysics Data System (ADS)

    Buffa, A.; Sangalli, G.; Vázquez, R.

    2014-01-01

    In this paper we introduce methods for electromagnetic wave propagation, based on splines and on T-splines. We define spline spaces which form a De Rham complex and following the isogeometric paradigm, we map them on domains which are (piecewise) spline or NURBS geometries. We analyze their geometric and topological structure, as related to the connectivity of the underlying mesh, and we present degrees of freedom together with their physical interpretation. The theory is then extended to the case of meshes with T-junctions, leveraging on the recent theory of T-splines. The use of T-splines enhance our spline methods with local refinement capability and numerical tests show the efficiency and the accuracy of the techniques we propose.

  4. Radial spline assembly for antifriction bearings

    NASA Technical Reports Server (NTRS)

    Moore, Jerry H. (Inventor)

    1993-01-01

    An outer race carrier is constructed for receiving an outer race of an antifriction bearing assembly. The carrier in turn is slidably fitted in an opening of a support wall to accommodate slight axial movements of a shaft. A plurality of longitudinal splines on the carrier are disposed to be fitted into matching slots in the opening. A deadband gap is provided between sides of the splines and slots, with a radial gap at ends of the splines and slots and a gap between the splines and slots sized larger than the deadband gap. With this construction, operational distortions (slope) of the support wall are accommodated by the larger radial gaps while the deadband gaps maintain a relatively high springrate of the housing. Additionally, side loads applied to the shaft are distributed between sides of the splines and slots, distributing such loads over a larger surface area than a race carrier of the prior art.

  5. B-spline Method in Fluid Dynamics

    NASA Technical Reports Server (NTRS)

    Botella, Olivier; Shariff, Karim; Mansour, Nagi N. (Technical Monitor)

    2001-01-01

    B-spline functions are bases for piecewise polynomials that possess attractive properties for complex flow simulations : they have compact support, provide a straightforward handling of boundary conditions and grid nonuniformities, and yield numerical schemes with high resolving power, where the order of accuracy is a mere input parameter. This paper reviews the progress made on the development and application of B-spline numerical methods to computational fluid dynamics problems. Basic B-spline approximation properties is investigated, and their relationship with conventional numerical methods is reviewed. Some fundamental developments towards efficient complex geometry spline methods are covered, such as local interpolation methods, fast solution algorithms on cartesian grid, non-conformal block-structured discretization, formulation of spline bases of higher continuity over triangulation, and treatment of pressure oscillations in Navier-Stokes equations. Application of some of these techniques to the computation of viscous incompressible flows is presented.

  6. Stable Local Volatility Calibration Using Kernel Splines

    NASA Astrophysics Data System (ADS)

    Coleman, Thomas F.; Li, Yuying; Wang, Cheng

    2010-09-01

    We propose an optimization formulation using L1 norm to ensure accuracy and stability in calibrating a local volatility function for option pricing. Using a regularization parameter, the proposed objective function balances the calibration accuracy with the model complexity. Motivated by the support vector machine learning, the unknown local volatility function is represented by a kernel function generating splines and the model complexity is controlled by minimizing the 1-norm of the kernel coefficient vector. In the context of the support vector regression for function estimation based on a finite set of observations, this corresponds to minimizing the number of support vectors for predictability. We illustrate the ability of the proposed approach to reconstruct the local volatility function in a synthetic market. In addition, based on S&P 500 market index option data, we demonstrate that the calibrated local volatility surface is simple and resembles the observed implied volatility surface in shape. Stability is illustrated by calibrating local volatility functions using market option data from different dates.

  7. Semiparametric regression during 2003–2007*

    PubMed Central

    Ruppert, David; Wand, M.P.; Carroll, Raymond J.

    2010-01-01

    Semiparametric regression is a fusion between parametric regression and nonparametric regression that integrates low-rank penalized splines, mixed model and hierarchical Bayesian methodology – thus allowing more streamlined handling of longitudinal and spatial correlation. We review progress in the field over the five-year period between 2003 and 2007. We find semiparametric regression to be a vibrant field with substantial involvement and activity, continual enhancement and widespread application. PMID:20305800

  8. Number systems, α-splines and refinement

    NASA Astrophysics Data System (ADS)

    Zube, Severinas

    2004-12-01

    This paper is concerned with the smooth refinable function on a plane relative with complex scaling factor . Characteristic functions of certain self-affine tiles related to a given scaling factor are the simplest examples of such refinable function. We study the smooth refinable functions obtained by a convolution power of such charactericstic functions. Dahlke, Dahmen, and Latour obtained some explicit estimates for the smoothness of the resulting convolution products. In the case α=1+i, we prove better results. We introduce α-splines in two variables which are the linear combination of shifted basic functions. We derive basic properties of α-splines and proceed with a detailed presentation of refinement methods. We illustrate the application of α-splines to subdivision with several examples. It turns out that α-splines produce well-known subdivision algorithms which are based on box splines: Doo-Sabin, Catmull-Clark, Loop, Midedge and some -subdivision schemes with good continuity. The main geometric ingredient in the definition of α-splines is the fundamental domain (a fractal set or a self-affine tile). The properties of the fractal obtained in number theory are important and necessary in order to determine two basic properties of α-splines: partition of unity and the refinement equation.

  9. Fuzzy tuning B-spline curve

    NASA Astrophysics Data System (ADS)

    Fatah, Abd.; Rozaimi

    2015-12-01

    In this paper, we will discuss about the construction of fuzzy tuning B-spline curve based on fuzzy set theory. The concept of fuzzy tuning in designing this B-spline curve is based on the uncertain knots values which has to be defined first and then the result will be blended together with B-spline function which exists in users presumption in deciding the best knots value of tuning. Therefore, fuzzy set theory especially fuzzy number concepts are used to define the uncertain knots values and then it will be become fuzzy knots values. The Result by using different values of fuzzy knots for constructing a fuzzy tuning of B-spline curves will be illustrated.

  10. An algorithm for natural spline interpolation

    NASA Astrophysics Data System (ADS)

    Traversoni, Leonardo

    1993-01-01

    Based on the work of Robin Sibson concerning Natural Neighbor Interpolant, this paper is devoted to incorporate this concept in Spline theory. To do this, first a new concept, the "Covering Spheres", is presented, which is then linked with Sibson's interpolant. Finally, the interpolant is reformulated to present it as a Bernstein polynomial in local coordinates instead of the usual presentation as rational quartics. As a corollary, the whole idea is presented as modified Vertex Splines.

  11. Multivariate spline methods in surface fitting

    NASA Technical Reports Server (NTRS)

    Guseman, L. F., Jr. (Principal Investigator); Schumaker, L. L.

    1984-01-01

    The use of spline functions in the development of classification algorithms is examined. In particular, a method is formulated for producing spline approximations to bivariate density functions where the density function is decribed by a histogram of measurements. The resulting approximations are then incorporated into a Bayesiaan classification procedure for which the Bayes decision regions and the probability of misclassification is readily computed. Some preliminary numerical results are presented to illustrate the method.

  12. Smoothing two-dimensional Malaysian mortality data using P-splines indexed by age and year

    NASA Astrophysics Data System (ADS)

    Kamaruddin, Halim Shukri; Ismail, Noriszura

    2014-06-01

    Nonparametric regression implements data to derive the best coefficient of a model from a large class of flexible functions. Eilers and Marx (1996) introduced P-splines as a method of smoothing in generalized linear models, GLMs, in which the ordinary B-splines with a difference roughness penalty on coefficients is being used in a single dimensional mortality data. Modeling and forecasting mortality rate is a problem of fundamental importance in insurance company calculation in which accuracy of models and forecasts are the main concern of the industry. The original idea of P-splines is extended to two dimensional mortality data. The data indexed by age of death and year of death, in which the large set of data will be supplied by Department of Statistics Malaysia. The extension of this idea constructs the best fitted surface and provides sensible prediction of the underlying mortality rate in Malaysia mortality case.

  13. Electricity Consumption in the Industrial Sector of Jordan: Application of Multivariate Linear Regression and Adaptive Neuro-Fuzzy Techniques

    NASA Astrophysics Data System (ADS)

    Samhouri, M.; Al-Ghandoor, A.; Fouad, R. H.

    2009-08-01

    In this study two techniques, for modeling electricity consumption of the Jordanian industrial sector, are presented: (i) multivariate linear regression and (ii) neuro-fuzzy models. Electricity consumption is modeled as function of different variables such as number of establishments, number of employees, electricity tariff, prevailing fuel prices, production outputs, capacity utilizations, and structural effects. It was found that industrial production and capacity utilization are the most important variables that have significant effect on future electrical power demand. The results showed that both the multivariate linear regression and neuro-fuzzy models are generally comparable and can be used adequately to simulate industrial electricity consumption. However, comparison that is based on the square root average squared error of data suggests that the neuro-fuzzy model performs slightly better for future prediction of electricity consumption than the multivariate linear regression model. Such results are in full agreement with similar work, using different methods, for other countries.

  14. A smoothing algorithm using cubic spline functions

    NASA Technical Reports Server (NTRS)

    Smith, R. E., Jr.; Price, J. M.; Howser, L. M.

    1974-01-01

    Two algorithms are presented for smoothing arbitrary sets of data. They are the explicit variable algorithm and the parametric variable algorithm. The former would be used where large gradients are not encountered because of the smaller amount of calculation required. The latter would be used if the data being smoothed were double valued or experienced large gradients. Both algorithms use a least-squares technique to obtain a cubic spline fit to the data. The advantage of the spline fit is that the first and second derivatives are continuous. This method is best used in an interactive graphics environment so that the junction values for the spline curve can be manipulated to improve the fit.

  15. Adaptivity Assessment of Regional Semi-Parametric VTEC Modeling to Different Data Distributions

    NASA Astrophysics Data System (ADS)

    Durmaz, Murat; Onur Karslıoǧlu, Mahmut

    2014-05-01

    Semi-parametric modelling of Vertical Total Electron Content (VTEC) combines parametric and non-parametric models into a single regression model for estimating the parameters and functions from Global Positioning System (GPS) observations. The parametric part is related to the Differential Code Biases (DCBs), which are fixed unknown parameters of the geometry-free linear combination (or the so called ionospheric observable). On the other hand, the non-parametric component is referred to the spatio-temporal distribution of VTEC which is estimated by applying the method of Multivariate Adaptive Regression B-Splines (BMARS). BMARS algorithm builds an adaptive model by using tensor product of univariate B-splines that are derived from the data. The algorithm searches for best fitting B-spline basis functions in a scale by scale strategy, where it starts adding large scale B-splines to the model and adaptively decreases the scale for including smaller scale features through a modified Gram-Schmidt ortho-normalization process. Then, the algorithm is extended to include the receiver DCBs where the estimates of the receiver DCBs and the spatio-temporal VTEC distribution can be obtained together in an adaptive semi-parametric model. In this work, the adaptivity of regional semi-parametric modelling of VTEC based on BMARS is assessed in different ground-station and data distribution scenarios. To evaluate the level of adaptivity the resulting DCBs and VTEC maps from different scenarios are compared not only with each other but also with CODE distributed GIMs and DCB estimates .

  16. Spline-Screw Multiple-Rotation Mechanism

    NASA Technical Reports Server (NTRS)

    Vranish, John M.

    1994-01-01

    Mechanism functions like combined robotic gripper and nut runner. Spline-screw multiple-rotation mechanism related to spline-screw payload-fastening system described in (GSC-13454). Incorporated as subsystem in alternative version of system. Mechanism functions like combination of robotic gripper and nut runner; provides both secure grip and rotary actuation of other parts of system. Used in system in which no need to make or break electrical connections to payload during robotic installation or removal of payload. More complicated version needed to make and break electrical connections. Mechanism mounted in payload.

  17. General spline filters for discontinuous Galerkin solutions

    PubMed Central

    Peters, Jörg

    2015-01-01

    The discontinuous Galerkin (dG) method outputs a sequence of polynomial pieces. Post-processing the sequence by Smoothness-Increasing Accuracy-Conserving (SIAC) convolution not only increases the smoothness of the sequence but can also improve its accuracy and yield superconvergence. SIAC convolution is considered optimal if the SIAC kernels, in the form of a linear combination of B-splines of degree d, reproduce polynomials of degree 2d. This paper derives simple formulas for computing the optimal SIAC spline coefficients for the general case including non-uniform knots. PMID:26594090

  18. On the interest of combining an analog model to a regression model for the adaptation of the downscaling link. Application to probabilistic prediction of precipitation over France.

    NASA Astrophysics Data System (ADS)

    Chardon, Jérémy; Hingray, Benoit; Favre, Anne-Catherine

    2016-04-01

    Scenarios of surface weather required for the impact studies have to be unbiased and adapted to the space and time scales of the considered hydro-systems. Hence, surface weather scenarios obtained from global climate models and/or numerical weather prediction models are not really appropriated. Outputs of these models have to be post-processed, which is often carried out thanks to Statistical Downscaling Methods (SDMs). Among those SDMs, approaches based on regression are often applied. For a given station, a regression link can be established between a set of large scale atmospheric predictors and the surface weather variable. These links are then used for the prediction of the latter. However, physical processes generating surface weather vary in time. This is well known for precipitation for instance. The most relevant predictors and the regression link are also likely to vary in time. A better prediction skill is thus classically obtained with a seasonal stratification of the data. Another strategy is to identify the most relevant predictor set and establish the regression link from dates that are similar - or analog - to the target date. In practice, these dates can be selected thanks to an analog model. In this study, we explore the possibility of improving the local performance of an analog model - where the analogy is applied to the geopotential heights 1000 and 500 hPa - using additional local scale predictors for the probabilistic prediction of the Safran precipitation over France. For each prediction day, the prediction is obtained from two GLM regression models - for both the occurrence and the quantity of precipitation - for which predictors and parameters are estimated from the analog dates. Firstly, the resulting combined model noticeably allows increasing the prediction performance by adapting the downscaling link for each prediction day. Secondly, the selected predictors for a given prediction depend on the large scale situation and on the

  19. Schwarz and multilevel methods for quadratic spline collocation

    SciTech Connect

    Christara, C.C.; Smith, B.

    1994-12-31

    Smooth spline collocation methods offer an alternative to Galerkin finite element methods, as well as to Hermite spline collocation methods, for the solution of linear elliptic Partial Differential Equations (PDEs). Recently, optimal order of convergence spline collocation methods have been developed for certain degree splines. Convergence proofs for smooth spline collocation methods are generally more difficult than for Galerkin finite elements or Hermite spline collocation, and they require stronger assumptions and more restrictions. However, numerical tests indicate that spline collocation methods are applicable to a wider class of problems, than the analysis requires, and are very competitive to finite element methods, with respect to efficiency. The authors will discuss Schwarz and multilevel methods for the solution of elliptic PDEs using quadratic spline collocation, and compare these with domain decomposition methods using substructuring. Numerical tests on a variety of parallel machines will also be presented. In addition, preliminary convergence analysis using Schwarz and/or maximum principle techniques will be presented.

  20. Partitioning of multivariate phenotypes using regression trees reveals complex patterns of adaptation to climate across the range of black cottonwood (Populus trichocarpa)

    PubMed Central

    Oubida, Regis W.; Gantulga, Dashzeveg; Zhang, Man; Zhou, Lecong; Bawa, Rajesh; Holliday, Jason A.

    2015-01-01

    Local adaptation to climate in temperate forest trees involves the integration of multiple physiological, morphological, and phenological traits. Latitudinal clines are frequently observed for these traits, but environmental constraints also track longitude and altitude. We combined extensive phenotyping of 12 candidate adaptive traits, multivariate regression trees, quantitative genetics, and a genome-wide panel of SNP markers to better understand the interplay among geography, climate, and adaptation to abiotic factors in Populus trichocarpa. Heritabilities were low to moderate (0.13–0.32) and population differentiation for many traits exceeded the 99th percentile of the genome-wide distribution of FST, suggesting local adaptation. When climate variables were taken as predictors and the 12 traits as response variables in a multivariate regression tree analysis, evapotranspiration (Eref) explained the most variation, with subsequent splits related to mean temperature of the warmest month, frost-free period (FFP), and mean annual precipitation (MAP). These grouping matched relatively well the splits using geographic variables as predictors: the northernmost groups (short FFP and low Eref) had the lowest growth, and lowest cold injury index; the southern British Columbia group (low Eref and intermediate temperatures) had average growth and cold injury index; the group from the coast of California and Oregon (high Eref and FFP) had the highest growth performance and the highest cold injury index; and the southernmost, high-altitude group (with high Eref and low FFP) performed poorly, had high cold injury index, and lower water use efficiency. Taken together, these results suggest variation in both temperature and water availability across the range shape multivariate adaptive traits in poplar. PMID:25870603

  1. Shaft Coupler With Friction and Spline Clutches

    NASA Technical Reports Server (NTRS)

    Thebert, Glenn W.

    1987-01-01

    Coupling, developed for rotor of lift/cruise aircraft, employs two clutches for smooth transmission of power from gas-turbine engine to rotor. Prior to ascent, coupling applies friction-type transition clutch that accelerates rotor shaft to speeds matching those of engine shaft. Once shafts synchronized, spline coupling engaged and friction clutch released to provide positive mechanical drive.

  2. Spline smoothing of histograms by linear programming

    NASA Technical Reports Server (NTRS)

    Bennett, J. O.

    1972-01-01

    An algorithm for an approximating function to the frequency distribution is obtained from a sample of size n. To obtain the approximating function a histogram is made from the data. Next, Euclidean space approximations to the graph of the histogram using central B-splines as basis elements are obtained by linear programming. The approximating function has area one and is nonnegative.

  3. An algorithm for surface smoothing with rational splines

    NASA Technical Reports Server (NTRS)

    Schiess, James R.

    1987-01-01

    Discussed is an algorithm for smoothing surfaces with spline functions containing tension parameters. The bivariate spline functions used are tensor products of univariate rational-spline functions. A distinct tension parameter corresponds to each rectangular strip defined by a pair of consecutive spline knots along either axis. Equations are derived for writing the bivariate rational spline in terms of functions and derivatives at the knots. Estimates of these values are obtained via weighted least squares subject to continuity constraints at the knots. The algorithm is illustrated on a set of terrain elevation data.

  4. Time-Warped Geodesic Regression

    PubMed Central

    Hong, Yi; Singh, Nikhil; Kwitt, Roland; Niethammer, Marc

    2016-01-01

    We consider geodesic regression with parametric time-warps. This allows, for example, to capture saturation effects as typically observed during brain development or degeneration. While highly-flexible models to analyze time-varying image and shape data based on generalizations of splines and polynomials have been proposed recently, they come at the cost of substantially more complex inference. Our focus in this paper is therefore to keep the model and its inference as simple as possible while allowing to capture expected biological variation. We demonstrate that by augmenting geodesic regression with parametric time-warp functions, we can achieve comparable flexibility to more complex models while retaining model simplicity. In addition, the time-warp parameters provide useful information of underlying anatomical changes as demonstrated for the analysis of corpora callosa and rat calvariae. We exemplify our strategy for shape regression on the Grassmann manifold, but note that the method is generally applicable for time-warped geodesic regression. PMID:25485368

  5. Cubic-spline interpolation to estimate effects of inbreeding on milk yield in first lactation Holstein cows

    PubMed Central

    Geha, Makram J.; Keown, Jeffrey F.; Van Vleck, L. Dale

    2011-01-01

    Milk yield records (305d, 2X, actual milk yield) of 123,639 registered first lactation Holstein cows were used to compare linear regression (y = β0 + β1X + e), quadratic regression, (y = β0 + β1X + β2X2 + e) cubic regression (y = β0 + β1X + β2X2 + β3X3 +e) and fixed factor models, with cubic-spline interpolation models, for estimating the effects of inbreeding on milk yield. Ten animal models, all with herd-year-season of calving as fixed effect, were compared using the Akaike corrected-Information Criterion (AICc). The cubic-spline interpolation model with seven knots had the lowest AICc, whereas for all those labeled as “traditional”, AICc was higher than the best model. Results from fitting inbreeding using a cubic-spline with seven knots were compared to results from fitting inbreeding as a linear covariate or as a fixed factor with seven levels. Estimates of inbreeding effects were not significantly different between the cubic-spline model and the fixed factor model, but were significantly different from the linear regression model. Milk yield decreased significantly at inbreeding levels greater than 9%. Variance component estimates were similar for the three models. Ranking of the top 100 sires with daughter records remained unaffected by the model used. PMID:21931517

  6. The Effect of Taper Angle and Spline Geometry on the Initial Stability of Tapered, Splined Modular Titanium Stems.

    PubMed

    Pierson, Jeffery L; Small, Scott R; Rodriguez, Jose A; Kang, Michael N; Glassman, Andrew H

    2015-07-01

    Design parameters affecting initial mechanical stability of tapered, splined modular titanium stems (TSMTSs) are not well understood. Furthermore, there is considerable variability in contemporary designs. We asked if spline geometry and stem taper angle could be optimized in TSMTS to improve mechanical stability to resist axial subsidence and increase torsional stability. Initial stability was quantified with stems of varied taper angle and spline geometry implanted in a foam model replicating 2cm diaphyseal engagement. Increased taper angle and a broad spline geometry exhibited significantly greater axial stability (+21%-269%) than other design combinations. Neither taper angle nor spline geometry significantly altered initial torsional stability. PMID:25754255

  7. Bézier projection: A unified approach for local projection and quadrature-free refinement and coarsening of NURBS and T-splines with particular application to isogeometric design and analysis

    NASA Astrophysics Data System (ADS)

    Thomas, D. C.; Scott, M. A.; Evans, J. A.; Tew, K.; Evans, E. J.

    2015-02-01

    We introduce B\\'{e}zier projection as an element-based local projection methodology for B-splines, NURBS, and T-splines. This new approach relies on the concept of B\\'{e}zier extraction and an associated operation introduced here, spline reconstruction, enabling the use of B\\'{e}zier projection in standard finite element codes. B\\'{e}zier projection exhibits provably optimal convergence and yields projections that are virtually indistinguishable from global $L^2$ projection. B\\'{e}zier projection is used to develop a unified framework for spline operations including cell subdivision and merging, degree elevation and reduction, basis roughening and smoothing, and spline reparameterization. In fact, B\\'{e}zier projection provides a \\emph{quadrature-free} approach to refinement and coarsening of splines. In this sense, B\\'{e}zier projection provides the fundamental building block for $hpkr$-adaptivity in isogeometric analysis.

  8. Updating a finite element model to the real experimental setup by thermographic measurements and adaptive regression optimization

    NASA Astrophysics Data System (ADS)

    Peeters, J.; Arroud, G.; Ribbens, B.; Dirckx, J. J. J.; Steenackers, G.

    2015-12-01

    In non-destructive evaluation the use of finite element models to evaluate structural behavior and experimental setup optimization can complement with the inspector's experience. A new adaptive response surface methodology, especially adapted for thermal problems, is used to update the experimental setup parameters in a finite element model to the state of the test sample measured by pulsed thermography. Poly Vinyl Chloride (PVC) test samples are used to examine the results for thermal insulator models. A comparison of the achieved results is made by changing the target values from experimental pulsed thermography data to a fixed validation model. Several optimizers are compared and discussed with the focus on speed and accuracy. A time efficiency increase of over 20 and an accuracy of over 99.5% are achieved by the choice of the correct parameter sets and optimizer. Proper parameter set selection criteria are defined and the influence of the choice of the optimization algorithm and parameter set on the accuracy and convergence time are investigated.

  9. Spline-Screw Payload-Fastening System

    NASA Technical Reports Server (NTRS)

    Vranish, John M.

    1994-01-01

    Payload handed off securely between robot and vehicle or structure. Spline-screw payload-fastening system includes mating female and male connector mechanisms. Clockwise (or counter-clockwise) rotation of splined male driver on robotic end effector causes connection between robot and payload to tighten (or loosen) and simultaneously causes connection between payload and structure to loosen (or tighten). Includes mechanisms like those described in "Tool-Changing Mechanism for Robot" (GSC-13435) and "Self-Aligning Mechanical and Electrical Coupling" (GSC-13430). Designed for use in outer space, also useful on Earth in applications needed for secure handling and secure mounting of equipment modules during storage, transport, and/or operation. Particularly useful in machine or robotic applications.

  10. The basis spline method and associated techniques

    SciTech Connect

    Bottcher, C.; Strayer, M.R.

    1989-01-01

    We outline the Basis Spline and Collocation methods for the solution of Partial Differential Equations. Particular attention is paid to the theory of errors, and the handling of non-self-adjoint problems which are generated by the collocation method. We discuss applications to Poisson's equation, the Dirac equation, and the calculation of bound and continuum states of atomic and nuclear systems. 12 refs., 6 figs.

  11. Parameter Choices for Approximation by Harmonic Splines

    NASA Astrophysics Data System (ADS)

    Gutting, Martin

    2016-04-01

    The approximation by harmonic trial functions allows the construction of the solution of boundary value problems in geoscience, e.g., in terms of harmonic splines. Due to their localizing properties regional modeling or the improvement of a global model in a part of the Earth's surface is possible with splines. Fast multipole methods have been developed for some cases of the occurring kernels to obtain a fast matrix-vector multiplication. The main idea of the fast multipole algorithm consists of a hierarchical decomposition of the computational domain into cubes and a kernel approximation for the more distant points. This reduces the numerical effort of the matrix-vector multiplication from quadratic to linear in reference to the number of points for a prescribed accuracy of the kernel approximation. The application of the fast multipole method to spline approximation which also allows the treatment of noisy data requires the choice of a smoothing parameter. We investigate different methods to (ideally automatically) choose this parameter with and without prior knowledge of the noise level. Thereby, the performance of these methods is considered for different types of noise in a large simulation study. Applications to gravitational field modeling are presented as well as the extension to boundary value problems where the boundary is the known surface of the Earth itself.

  12. A natural spline interpolation and exponential parameterization

    NASA Astrophysics Data System (ADS)

    Kozera, R.; Wilkołazka, M.

    2016-06-01

    We consider here a natural spline interpolation based on reduced data and the so-called exponential parameterization (depending on parameter λ ∈ [0, 1]). In particular, the latter is studied in the context of the trajectory approximation in arbitrary euclidean space. The term reduced data refers to an ordered collection of interpolation points without provision of the corresponding knots. The numerical verification of the intrinsic asymptotics α(λ) in γ approximation by natural spline γ^3'N is conducted here for regular and sufficiently smooth curve γ sampled more-or-less uniformly. We select in this paper the substitutes for the missing knots according to the exponential parameterization. The outcomes of the numerical tests manifest sharp linear convergence orders α(λ) = 1, for all λ ∈ [0, 1). In addition, the latter results in unexpected left-hand side dis-continuity at λ = 1, since as shown again here a sharp quadratic order α(1) = 2 prevails. Remarkably, the case of α(1)=2 (derived for reduced data) coincides with the well-known asymptotics established for a natural spline to fit non-reduced data determined by the sequence of interpolation points supplemented with the corresponding knots (see e.g. [1]).

  13. Quantitative analysis of dynamic contrast-enhanced MR images based on Bayesian P-splines.

    PubMed

    Schmid, Volker J; Whitcher, Brandon; Padhani, Anwar R; Yang, Guang-Zhong

    2009-06-01

    Dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) is an important tool for detecting subtle kinetic changes in cancerous tissue. Quantitative analysis of DCE-MRI typically involves the convolution of an arterial input function (AIF) with a nonlinear pharmacokinetic model of the contrast agent concentration. Parameters of the kinetic model are biologically meaningful, but the optimization of the nonlinear model has significant computational issues. In practice, convergence of the optimization algorithm is not guaranteed and the accuracy of the model fitting may be compromised. To overcome these problems, this paper proposes a semi-parametric penalized spline smoothing approach, where the AIF is convolved with a set of B-splines to produce a design matrix using locally adaptive smoothing parameters based on Bayesian penalized spline models (P-splines). It has been shown that kinetic parameter estimation can be obtained from the resulting deconvolved response function, which also includes the onset of contrast enhancement. Detailed validation of the method, both with simulated and in vivo data, is provided. PMID:19272996

  14. Evolution of an adaptive behavior and its sensory receptors promotes eye regression in blind cavefish: response to Borowsky (2013).

    PubMed

    Yoshizawa, Masato; O'Quin, Kelly E; Jeffery, William R

    2013-01-01

    Vibration attraction behavior (VAB) is the swimming of fish toward an oscillating object, a behavior that is likely adaptive because it increases foraging efficiency in darkness. VAB is seen in a small proportion of Astyanax surface-dwelling populations (surface fish) but is pronounced in cave-dwelling populations (cavefish). In a recent study, we identified two quantitative trait loci for VAB on Astyanax linkage groups 2 and 17. We also demonstrated that a small population of superficial neuromast sensors located within the eye orbit (EO SN) facilitate VAB, and two quantitative trait loci (QTL) were identified for EO SN that were congruent with those for VAB. Finally, we showed that both VAB and EO SN are negatively correlated with eye size, and that two (of several) QTL for eye size overlap VAB and EO SN QTLs. From these results, we concluded that the adaptive evolution of VAB and EO SN has contributed to the indirect loss of eyes in cavefish, either as a result of pleiotropy or tight physical linkage of the mutations underlying these traits. In a subsequent commentary, Borowsky argues that there is poor experimental support for our conclusions. Specifically, Borowsky states that: (1) linkage groups (LGs) 2 and 17 harbor QTL for many traits and, therefore, no evidence exists for an exclusive interaction among the overlapping VAB, EO SN and eye size QTL; (2) some of the QTL we identified are too broad (>20 cM) to support the hypothesis of correlated evolution due to pleiotropy or hitchhiking; and (3) VAB is unnecessary to explain the indirect evolution of eye-loss since the negative polarity of numerous eye QTL is consistent with direct selection against eyes. Borowsky further argues that (4) it is difficult to envision an evolutionary scenario whereby VAB and EO SN drive eye loss, since the eyes must first be reduced in order to increase the number of EO SN and, therefore, VAB. In this response, we explain why the evidence of one trait influencing eye reduction

  15. Development and flight tests of vortex-attenuating splines

    NASA Technical Reports Server (NTRS)

    Hastings, E. C., Jr.; Patterson, J. C., Jr.; Shanks, R. E.; Champine, R. A.; Copeland, W. L.; Young, D. C.

    1975-01-01

    The ground tests and full-scale flight tests conducted during development of the vortex-attenuating spline are described. The flight tests were conducted using a vortex generating aircraft with and without splines; a second aircraft was used to probe the vortices generated in both cases. The results showed that splines significantly reduced the vortex effects, but resulted in some noise and climb performance penalties on the generating aircraft.

  16. Higher-order numerical solutions using cubic splines

    NASA Technical Reports Server (NTRS)

    Rubin, S. G.; Khosla, P. K.

    1976-01-01

    A cubic spline collocation procedure was developed for the numerical solution of partial differential equations. This spline procedure is reformulated so that the accuracy of the second-derivative approximation is improved and parallels that previously obtained for lower derivative terms. The final result is a numerical procedure having overall third-order accuracy of a nonuniform mesh. Solutions using both spline procedures, as well as three-point finite difference methods, are presented for several model problems.

  17. On the spline-based wavelet differentiation matrix

    NASA Technical Reports Server (NTRS)

    Jameson, Leland

    1993-01-01

    The differentiation matrix for a spline-based wavelet basis is constructed. Given an n-th order spline basis it is proved that the differentiation matrix is accurate of order 2n + 2 when periodic boundary conditions are assumed. This high accuracy, or superconvergence, is lost when the boundary conditions are no longer periodic. Furthermore, it is shown that spline-based bases generate a class of compact finite difference schemes.

  18. Fatigue crack growth monitoring of idealized gearbox spline component using acoustic emission

    NASA Astrophysics Data System (ADS)

    Zhang, Lu; Ozevin, Didem; Hardman, William; Kessler, Seth; Timmons, Alan

    2016-04-01

    The spline component of gearbox structure is a non-redundant element that requires early detection of flaws for preventing catastrophic failures. The acoustic emission (AE) method is a direct way of detecting active flaws; however, the method suffers from the influence of background noise and location/sensor based pattern recognition method. It is important to identify the source mechanism and adapt it to different test conditions and sensors. In this paper, the fatigue crack growth of a notched and flattened gearbox spline component is monitored using the AE method in a laboratory environment. The test sample has the major details of the spline component on a flattened geometry. The AE data is continuously collected together with strain gauges strategically positions on the structure. The fatigue test characteristics are 4 Hz frequency and 0.1 as the ratio of minimum to maximum loading in tensile regime. It is observed that there are significant amount of continuous emissions released from the notch tip due to the formation of plastic deformation and slow crack growth. The frequency spectra of continuous emissions and burst emissions are compared to understand the difference of sudden crack growth and gradual crack growth. The predicted crack growth rate is compared with the AE data using the cumulative AE events at the notch tip. The source mechanism of sudden crack growth is obtained solving the inverse mathematical problem from output signal to input signal. The spline component of gearbox structure is a non-redundant element that requires early detection of flaws for preventing catastrophic failures. In this paper, the fatigue crack growth of a notched and flattened gearbox spline component is monitored using the AE method The AE data is continuously collected together with strain gauges. There are significant amount of continuous emissions released from the notch tip due to the formation of plastic deformation and slow crack growth. The source mechanism of

  19. Color management with a hammer: the B-spline fitter

    NASA Astrophysics Data System (ADS)

    Bell, Ian E.; Liu, Bonny H. P.

    2003-01-01

    To paraphrase Abraham Maslow: If the only tool you have is a hammer, every problem looks like a nail. We have a B-spline fitter customized for 3D color data, and many problems in color management can be solved with this tool. Whereas color devices were once modeled with extensive measurement, look-up tables and trilinear interpolation, recent improvements in hardware have made B-spline models an affordable alternative. Such device characterizations require fewer color measurements than piecewise linear models, and have uses beyond simple interpolation. A B-spline fitter, for example, can act as a filter to remove noise from measurements, leaving a model with guaranteed smoothness. Inversion of the device model can then be carried out consistently and efficiently, as the spline model is well behaved and its derivatives easily computed. Spline-based algorithms also exist for gamut mapping, the composition of maps, and the extrapolation of a gamut. Trilinear interpolation---a degree-one spline---can still be used after nonlinear spline smoothing for high-speed evaluation with robust convergence. Using data from several color devices, this paper examines the use of B-splines as a generic tool for modeling devices and mapping one gamut to another, and concludes with applications to high-dimensional and spectral data.

  20. Analysis of the boundary conditions of the spline filter

    NASA Astrophysics Data System (ADS)

    Tong, Mingsi; Zhang, Hao; Ott, Daniel; Zhao, Xuezeng; Song, John

    2015-09-01

    The spline filter is a standard linear profile filter recommended by ISO/TS 16610-22 (2006). The main advantage of the spline filter is that no end-effects occur as a result of the filter. The ISO standard also provides the tension parameter β =0.625 24 to make the transmission characteristic of the spline filter approximately similar to the Gaussian filter. However, when the tension parameter β is not zero, end-effects appear. To resolve this problem, we analyze 14 different combinations of boundary conditions of the spline filter and propose a set of new boundary conditions in this paper. The new boundary conditions can provide satisfactory end portions of the output form without end-effects for the spline filter while still maintaining the value of β =0.625 24 .

  1. Metal flowing of involute spline cold roll-beating forming

    NASA Astrophysics Data System (ADS)

    Cui, Fengkui; Wang, Xiaoqiang; Zhang, Fengshou; Xu, Hongyu; Quan, Jianhui; Li, Yan

    2013-09-01

    The present research on involute spline cold roll-beating forming is mainly about the principles and motion relations of cold roll-beating, the theory of roller design, and the stress and strain field analysis of cold roll-beating, etc. However, the research on law of metal flow in the forming process of involute spline cold roll-beating is rare. According to the principle of involute spline cold roll-beating, the contact model between the rollers and the spline shaft blank in the process of cold roll-beating forming is established, and the theoretical analysis of metal flow in the cold roll-beating deforming region is proceeded. A finite element model of the spline cold roll-beating process is established, the formation mechanism of the involute spline tooth profile in cold roll-beating forming process is studied, and the node flow tracks of the deformation area are analyzed. The experimental research on the metal flow of cold roll-beating spline is conducted, and the metallographic structure variation, grain characteristics and metal flow line of the different tooth profile area are analyzed. The experimental results show that the particle flow directions of the deformable bodies in cold roll-beating deformation area are determined by the minimum moving resistance. There are five types of metal flow rules of the deforming region in the process of cold roll-beating forming. The characteristics of involute spline cold roll-beating forming are given, and the forming mechanism of involute spline cold roll-beating is revealed. This paper researches the law of metal flow in the forming process of involute spline cold roll-beating, which provides theoretical supports for solving the tooth profile forming quality problem.

  2. Spline Approximation of Thin Shell Dynamics

    NASA Technical Reports Server (NTRS)

    delRosario, R. C. H.; Smith, R. C.

    1996-01-01

    A spline-based method for approximating thin shell dynamics is presented here. While the method is developed in the context of the Donnell-Mushtari thin shell equations, it can be easily extended to the Byrne-Flugge-Lur'ye equations or other models for shells of revolution as warranted by applications. The primary requirements for the method include accuracy, flexibility and efficiency in smart material applications. To accomplish this, the method was designed to be flexible with regard to boundary conditions, material nonhomogeneities due to sensors and actuators, and inputs from smart material actuators such as piezoceramic patches. The accuracy of the method was also of primary concern, both to guarantee full resolution of structural dynamics and to facilitate the development of PDE-based controllers which ultimately require real-time implementation. Several numerical examples provide initial evidence demonstrating the efficacy of the method.

  3. Implicit B-spline surface reconstruction.

    PubMed

    Rouhani, Mohammad; Sappa, Angel D; Boyer, Edmond

    2015-01-01

    This paper presents a fast and flexible curve, and surface reconstruction technique based on implicit B-spline. This representation does not require any parameterization and it is locally supported. This fact has been exploited in this paper to propose a reconstruction technique through solving a sparse system of equations. This method is further accelerated to reduce the dimension to the active control lattice. Moreover, the surface smoothness and user interaction are allowed for controlling the surface. Finally, a novel weighting technique has been introduced in order to blend small patches and smooth them in the overlapping regions. The whole framework is very fast and efficient and can handle large cloud of points with very low computational cost. The experimental results show the flexibility and accuracy of the proposed algorithm to describe objects with complex topologies. Comparisons with other fitting methods highlight the superiority of the proposed approach in the presence of noise and missing data. PMID:25373084

  4. Spline-Locking Screw Fastening Strategy (SLSFS)

    NASA Technical Reports Server (NTRS)

    Vranish, John M.

    1991-01-01

    A fastener was developed by NASA Goddard for efficiently performing assembly, maintenance, and equipment replacement functions in space using either robotic or astronaut means. This fastener, the 'Spline Locking Screw' (SLS) would also have significant commercial value in advanced manufacturing. Commercial (or DoD) products could be manufactured in such a way that their prime subassemblies would be assembled using SLS fasteners. This would permit machines and robots to disconnect and replace these modules/parts with ease, greatly reducing life cycle costs of the products and greatly enhancing the quality, timeliness, and consistency of repairs, upgrades, and remanufacturing. The operation of the basic SLS fastener is detailed, including hardware and test results. Its extension into a comprehensive fastening strategy for NASA use in space is also outlined. Following this, the discussion turns toward potential commercial and government applications and the potential market significance of same.

  5. Spline-locking screw fastening strategy

    NASA Technical Reports Server (NTRS)

    Vranish, John M.

    1992-01-01

    A fastener was developed by NASA Goddard for efficiently performing assembly, maintenance, and equipment replacement functions in space using either robotics or astronaut means. This fastener, the 'Spline Locking Screw' (SLS) would also have significant commercial value in advanced space manufacturing. Commercial (or DoD) products could be manufactured in such a way that their prime subassemblies would be assembled using SLS fasteners. This would permit machines and robots to disconnect and replace these modules/parts with ease, greatly reducing life cycle costs of the products and greatly enhancing the quality, timeliness, and consistency of repairs, upgrades, and remanufacturing. The operation of the basic SLS fastener is detailed, including hardware and test results. Its extension into a comprehensive fastening strategy for NASA use in space is also outlined. Following this, the discussion turns toward potential commercial and government applications and the potential market significance of same.

  6. Spline Curves, Wire Frames and Bvalue

    NASA Technical Reports Server (NTRS)

    Smith, L.; Munchmeyer, F.

    1985-01-01

    The methods that were developed for wire-frame design are described. The principal tools for control of a curve during interactive design are mathematical ducks. The simplest of these devices is an analog of the draftsman's lead weight that he uses to control a mechanical spline also create Ducks for controlling differential and integral properties of curves were created. Other methods presented include: constructing the end of a Bezier polygon to gain quick and reasonably confident control of the end tangent vector, end curvature and end torsion; keeping the magnitude of unwanted curvature oscillations within tolerance; constructing the railroad curves that appear in many engineering design problems; and controlling the frame to minimize errors at mesh points and to optimize the shapes of the curve elements.

  7. The spline probability hypothesis density filter

    NASA Astrophysics Data System (ADS)

    Sithiravel, Rajiv; Tharmarasa, Ratnasingham; McDonald, Mike; Pelletier, Michel; Kirubarajan, Thiagalingam

    2012-06-01

    The Probability Hypothesis Density Filter (PHD) is a multitarget tracker for recursively estimating the number of targets and their state vectors from a set of observations. The PHD filter is capable of working well in scenarios with false alarms and missed detections. Two distinct PHD filter implementations are available in the literature: the Sequential Monte Carlo Probability Hypothesis Density (SMC-PHD) and the Gaussian Mixture Probability Hypothesis Density (GM-PHD) filters. The SMC-PHD filter uses particles to provide target state estimates, which can lead to a high computational load, whereas the GM-PHD filter does not use particles, but restricts to linear Gaussian mixture models. The SMC-PHD filter technique provides only weighted samples at discrete points in the state space instead of a continuous estimate of the probability density function of the system state and thus suffers from the well-known degeneracy problem. This paper proposes a B-Spline based Probability Hypothesis Density (S-PHD) filter, which has the capability to model any arbitrary probability density function. The resulting algorithm can handle linear, non-linear, Gaussian, and non-Gaussian models and the S-PHD filter can also provide continuous estimates of the probability density function of the system state. In addition, by moving the knots dynamically, the S-PHD filter ensures that the splines cover only the region where the probability of the system state is significant, hence the high efficiency of the S-PHD filter is maintained at all times. Also, unlike the SMC-PHD filter, the S-PHD filter is immune to the degeneracy problem due to its continuous nature. The S-PHD filter derivations and simulations are provided in this paper.

  8. Variable selection in Bayesian smoothing spline ANOVA models: Application to deterministic computer codes

    PubMed Central

    Reich, Brian J.; Storlie, Curtis B.; Bondell, Howard D.

    2009-01-01

    With many predictors, choosing an appropriate subset of the covariates is a crucial, and difficult, step in nonparametric regression. We propose a Bayesian nonparametric regression model for curve-fitting and variable selection. We use the smoothing spline ANOVA framework to decompose the regression function into interpretable main effect and interaction functions. Stochastic search variable selection via MCMC sampling is used to search for models that fit the data well. Also, we show that variable selection is highly-sensitive to hyperparameter choice and develop a technique to select hyperparameters that control the long-run false positive rate. The method is used to build an emulator for a complex computer model for two-phase fluid flow. PMID:19789732

  9. Growth curve analysis for plasma profiles using smoothing splines

    SciTech Connect

    Imre, K.

    1993-05-01

    We are developing a profile analysis code for the statistical estimation of the parametric dependencies of the temperature and density profiles in tokamaks. Our code uses advanced statistical techniques to determine the optimal fit, i.e. the fit which minimized the predictive error. For a forty TFTR Ohmic profile dataset, our preliminary results indicate that the profile shape depends almost exclusively on q[sub a][prime] but that the shape dependencies are not Gaussian. We are now comparing various shape models on the TFTR data. In the first six months, we have completed the core modules of the code, including a B-spline package for variable knot locations, a data-based method to determine the optimal smoothing parameters, self-consistent estimation of the bias errors, and adaptive fitting near the plasma edge. Visualization graphics already include three dimensional surface plots, and discharge by discharge plots of the predicted curves with error bars together with the actual measurements values, and plots of the basis functions with errors.

  10. Fitting multidimensional splines using statistical variable selection techniques

    NASA Technical Reports Server (NTRS)

    Smith, P. L.

    1982-01-01

    This report demonstrates the successful application of statistical variable selection techniques to fit splines. Major emphasis is given to knot selection, but order determination is also discussed. Two FORTRAN backward elimination programs using the B-spline basis were developed, and the one for knot elimination is compared in detail with two other spline-fitting methods and several statistical software packages. An example is also given for the two-variable case using a tensor product basis, with a theoretical discussion of the difficulties of their use.

  11. A Simple and Fast Spline Filtering Algorithm for Surface Metrology

    PubMed Central

    Zhang, Hao; Ott, Daniel; Song, John; Tong, Mingsi; Chu, Wei

    2015-01-01

    Spline filters and their corresponding robust filters are commonly used filters recommended in ISO (the International Organization for Standardization) standards for surface evaluation. Generally, these linear and non-linear spline filters, composed of symmetric, positive-definite matrices, are solved in an iterative fashion based on a Cholesky decomposition. They have been demonstrated to be relatively efficient, but complicated and inconvenient to implement. A new spline-filter algorithm is proposed by means of the discrete cosine transform or the discrete Fourier transform. The algorithm is conceptually simple and very convenient to implement. PMID:26958443

  12. An Examination of New Paradigms for Spline Approximations.

    PubMed

    Witzgall, Christoph; Gilsinn, David E; McClain, Marjorie A

    2006-01-01

    Lavery splines are examined in the univariate and bivariate cases. In both instances relaxation based algorithms for approximate calculation of Lavery splines are proposed. Following previous work Gilsinn, et al. [7] addressing the bivariate case, a rotationally invariant functional is assumed. The version of bivariate splines proposed in this paper also aims at irregularly spaced data and uses Hseih-Clough-Tocher elements based on the triangulated irregular network (TIN) concept. In this paper, the univariate case, however, is investigated in greater detail so as to further the understanding of the bivariate case. PMID:27274917

  13. Monotonicity preserving using GC1 rational quartic spline

    NASA Astrophysics Data System (ADS)

    Karim, Samsul Ariffin Abdul; Pang, Kong Voon

    2012-09-01

    This paper proposed GC1 rational quartic spline (quartic numerator and linear denominator) with two parameters to preserve the shape of the monotone data. Simple data dependent constraints will be derived on one of the parameters while the other is free to modify and refine the resultant shape of the data. Both parameters are independent to each other. The method under consideration here, avoid the modification of the derivative when the sufficient condition for the monotonicity are violated as can be noticed in the original construction of C1 rational quartic spline with linear denominator. Numerical comparison between the proposed scheme and C1 rational quartic spline will be given.

  14. Logistic Regression

    NASA Astrophysics Data System (ADS)

    Grégoire, G.

    2014-12-01

    The logistic regression originally is intended to explain the relationship between the probability of an event and a set of covariables. The model's coefficients can be interpreted via the odds and odds ratio, which are presented in introduction of the chapter. The observations are possibly got individually, then we speak of binary logistic regression. When they are grouped, the logistic regression is said binomial. In our presentation we mainly focus on the binary case. For statistical inference the main tool is the maximum likelihood methodology: we present the Wald, Rao and likelihoods ratio results and their use to compare nested models. The problems we intend to deal with are essentially the same as in multiple linear regression: testing global effect, individual effect, selection of variables to build a model, measure of the fitness of the model, prediction of new values… . The methods are demonstrated on data sets using R. Finally we briefly consider the binomial case and the situation where we are interested in several events, that is the polytomous (multinomial) logistic regression and the particular case of ordinal logistic regression.

  15. Method and machine for splining clutch hubs with close tolerance spline bellmouth and oil seal surface roundness

    SciTech Connect

    Hill, G.R.

    1987-11-10

    A power transmission member is described comprising a radially-extending end wall and a cylindrical axially-extending sleeve connected to the end wall and terminating remote from the end wall in an open end. The sleeve has pressure formed internal and external axially-extending splines formed therein by intermeshing of teeth of a mandrel on which the sleeve is mounted and teeth of a pair of racks slidable therepast. The splines terminate short of the open sleeve end in an unsplined cylindrical ring-shaped lip portion which reduced bellmouth of the splines to within about 0.010 inch along their length.

  16. Adaptation.

    PubMed

    Broom, Donald M

    2006-01-01

    The term adaptation is used in biology in three different ways. It may refer to changes which occur at the cell and organ level, or at the individual level, or at the level of gene action and evolutionary processes. Adaptation by cells, especially nerve cells helps in: communication within the body, the distinguishing of stimuli, the avoidance of overload and the conservation of energy. The time course and complexity of these mechanisms varies. Adaptive characters of organisms, including adaptive behaviours, increase fitness so this adaptation is evolutionary. The major part of this paper concerns adaptation by individuals and its relationships to welfare. In complex animals, feed forward control is widely used. Individuals predict problems and adapt by acting before the environmental effect is substantial. Much of adaptation involves brain control and animals have a set of needs, located in the brain and acting largely via motivational mechanisms, to regulate life. Needs may be for resources but are also for actions and stimuli which are part of the mechanism which has evolved to obtain the resources. Hence pigs do not just need food but need to be able to carry out actions like rooting in earth or manipulating materials which are part of foraging behaviour. The welfare of an individual is its state as regards its attempts to cope with its environment. This state includes various adaptive mechanisms including feelings and those which cope with disease. The part of welfare which is concerned with coping with pathology is health. Disease, which implies some significant effect of pathology, always results in poor welfare. Welfare varies over a range from very good, when adaptation is effective and there are feelings of pleasure or contentment, to very poor. A key point concerning the concept of individual adaptation in relation to welfare is that welfare may be good or poor while adaptation is occurring. Some adaptation is very easy and energetically cheap and

  17. Detail view of redwood spline joinery of woodframe section against ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Detail view of redwood spline joinery of wood-frame section against adobe addition (measuring tape denotes plumb line from center of top board) - First Theatre in California, Southwest corner of Pacific & Scott Streets, Monterey, Monterey County, CA

  18. Modeling terminal ballistics using blending-type spline surfaces

    NASA Astrophysics Data System (ADS)

    Pedersen, Aleksander; Bratlie, Jostein; Dalmo, Rune

    2014-12-01

    We explore using GERBS, a blending-type spline construction, to represent deform able thin-plates and model terminal ballistics. Strategies to construct geometry for different scenarios of terminal ballistics are proposed.

  19. Construction of spline functions in spreadsheets to smooth experimental data

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A previous manuscript detailed how spreadsheet software can be programmed to smooth experimental data via cubic splines. This addendum corrects a few errors in the previous manuscript and provides additional necessary programming steps. ...

  20. C1 Hermite shape preserving polynomial splines in R3

    NASA Astrophysics Data System (ADS)

    Gabrielides, Nikolaos C.

    2012-06-01

    The C 2 variable degree splines1-3 have been proven to be an efficient tool for solving the curve shape-preserving interpolation problem in two and three dimensions. Based on this representation, the current paper proposes a Hermite interpolation scheme, to construct C 1 shape-preserving splines of variable degree. After this, a slight modification of the method leads to a C 1 shape-preserving Hermite cubic spline. Both methods can easily be developed within a CAD system, since they compute directly (without iterations) the B-spline control polygon. They have been implemented and tested within the DNV Software CAD/CAE system GeniE. [Figure not available: see fulltext.

  1. Positivity preserving using GC1 rational quartic spline

    NASA Astrophysics Data System (ADS)

    Abdul Karim, Samsul Ariffin; Pang, Kong Voon; Hashim, Ishak

    2013-04-01

    In this paper, we study the shape preserving interpolation for positive data using a rational quartic spline which has a quartic numerator and linear denominator. The rational quartic splines have GC1 continuity at join knots. Simple data dependent constraints are derived on the shape parameters in the description of the rational interpolant. Numerical comparison between the proposed scheme and the existing scheme is discussed. The results indicate that the proposed scheme works well for all tested data sets.

  2. B-Spline Filtering for Automatic Detection of Calcification Lesions in Mammograms

    NASA Astrophysics Data System (ADS)

    Bueno, G.; Sánchez, S.; Ruiz, M.

    2006-10-01

    Breast cancer continues to be an important health problem between women population. Early detection is the only way to improve breast cancer prognosis and significantly reduce women mortality. It is by using CAD systems that radiologist can improve their ability to detect, and classify lesions in mammograms. In this study the usefulness of using B-spline based on a gradient scheme and compared to wavelet and adaptative filtering has been investigated for calcification lesion detection and as part of CAD systems. The technique has been applied to different density tissues. A qualitative validation shows the success of the method.

  3. Adapt

    NASA Astrophysics Data System (ADS)

    Bargatze, L. F.

    2015-12-01

    Active Data Archive Product Tracking (ADAPT) is a collection of software routines that permits one to generate XML metadata files to describe and register data products in support of the NASA Heliophysics Virtual Observatory VxO effort. ADAPT is also a philosophy. The ADAPT concept is to use any and all available metadata associated with scientific data to produce XML metadata descriptions in a consistent, uniform, and organized fashion to provide blanket access to the full complement of data stored on a targeted data server. In this poster, we present an application of ADAPT to describe all of the data products that are stored by using the Common Data File (CDF) format served out by the CDAWEB and SPDF data servers hosted at the NASA Goddard Space Flight Center. These data servers are the primary repositories for NASA Heliophysics data. For this purpose, the ADAPT routines have been used to generate data resource descriptions by using an XML schema named Space Physics Archive, Search, and Extract (SPASE). SPASE is the designated standard for documenting Heliophysics data products, as adopted by the Heliophysics Data and Model Consortium. The set of SPASE XML resource descriptions produced by ADAPT includes high-level descriptions of numerical data products, display data products, or catalogs and also includes low-level "Granule" descriptions. A SPASE Granule is effectively a universal access metadata resource; a Granule associates an individual data file (e.g. a CDF file) with a "parent" high-level data resource description, assigns a resource identifier to the file, and lists the corresponding assess URL(s). The CDAWEB and SPDF file systems were queried to provide the input required by the ADAPT software to create an initial set of SPASE metadata resource descriptions. Then, the CDAWEB and SPDF data repositories were queried subsequently on a nightly basis and the CDF file lists were checked for any changes such as the occurrence of new, modified, or deleted

  4. Robust Regression.

    PubMed

    Huang, Dong; Cabral, Ricardo; De la Torre, Fernando

    2016-02-01

    Discriminative methods (e.g., kernel regression, SVM) have been extensively used to solve problems such as object recognition, image alignment and pose estimation from images. These methods typically map image features ( X) to continuous (e.g., pose) or discrete (e.g., object category) values. A major drawback of existing discriminative methods is that samples are directly projected onto a subspace and hence fail to account for outliers common in realistic training sets due to occlusion, specular reflections or noise. It is important to notice that existing discriminative approaches assume the input variables X to be noise free. Thus, discriminative methods experience significant performance degradation when gross outliers are present. Despite its obvious importance, the problem of robust discriminative learning has been relatively unexplored in computer vision. This paper develops the theory of robust regression (RR) and presents an effective convex approach that uses recent advances on rank minimization. The framework applies to a variety of problems in computer vision including robust linear discriminant analysis, regression with missing data, and multi-label classification. Several synthetic and real examples with applications to head pose estimation from images, image and video classification and facial attribute classification with missing data are used to illustrate the benefits of RR. PMID:26761740

  5. Coding of images by methods of a spline interpolation

    NASA Astrophysics Data System (ADS)

    Kozhemyako, Vladimir P.; Maidanuik, V. P.; Etokov, I. A.; Zhukov, Konstantin M.; Jorban, Saleh R.

    2000-06-01

    In the case of image coding are containing interpolation methods, a linear methods of component forming usually used. However, taking in account the huge speed increasing of a computer and hardware integration power, of special interest was more complicated interpolation methods, in particular spline interpolation. A spline interpolation is known to be a approximation that performed by spline, which consist of polynomial bounds, where a cub parabola usually used. At this article is to perform image analysis by 5 X 5 aperture, result in count rejection of low-frequence component of image: an one base count per 5 X 5 size fragment. The passed source counts were restoring by spline interpolation methods, then formed counts of high-frequence image component, by subtract from counts of initial image a low-frequence component and their quantization. At the final stage Huffman coding performed to divert of statistical redundancy. Spacious set of experiments with various images showed that source compression factor may be founded into limits of 10 - 70, which for majority test images are superlative source compression factor by JPEG standard applications at the same image quality. Investigated research show that spline approximation allow to improve restored image quality and compression factor to compare with linear interpolation. Encoding program modules has work out for BMP-format files, on the Windows and MS-DOS platforms.

  6. Polynomial estimation of the smoothing splines for the new Finnish reference values for spirometry.

    PubMed

    Kainu, Annette; Timonen, Kirsi

    2016-07-01

    Background Discontinuity of spirometry reference values from childhood into adulthood has been a problem with traditional reference values, thus modern modelling approaches using smoothing spline functions to better depict the transition during growth and ageing have been recently introduced. Following the publication of the new international Global Lung Initiative (GLI2012) reference values also new national Finnish reference values have been calculated using similar GAMLSS-modelling, with spline estimates for mean (Mspline) and standard deviation (Sspline) provided in tables. The aim of this study was to produce polynomial estimates for these spline functions to use in lieu of lookup tables and to assess their validity in the reference population of healthy non-smokers. Methods Linear regression modelling was used to approximate the estimated values for Mspline and Sspline using similar polynomial functions as in the international GLI2012 reference values. Estimated values were compared to original calculations in absolute values, the derived predicted mean and individually calculated z-scores using both values. Results Polynomial functions were estimated for all 10 spirometry variables. The agreement between original lookup table-produced values and polynomial estimates was very good, with no significant differences found. The variation slightly increased in larger predicted volumes, but a range of -0.018 to +0.022 litres of FEV1 representing ± 0.4% of maximum difference in predicted mean. Conclusions Polynomial approximations were very close to the original lookup tables and are recommended for use in clinical practice to facilitate the use of new reference values. PMID:27071737

  7. User's guide for Wilson-Fowler spline software: SPLPKG, WFCMPR, WFAPPX - CADCAM-010

    SciTech Connect

    Fletcher, S.K.

    1985-02-01

    The Wilson-Fowler spline is widely used in computer aided manufacturing, but is not available in all commercial CAD/CAM systems. These three programs provide a capability for generating, comparing, and approximating Wilson-Fowler splines. SPLPKG generates a spline passing through given nodes, and computes a piecewise linear approximation to the spline. WFCMPR computes the difference between two splines with common nodes. WFAPPX computes the difference between a spline and a piecewise linear curve. The programs are in Fortran 77 and are machine independent.

  8. Bidirectional Elastic Image Registration Using B-Spline Affine Transformation

    PubMed Central

    Gu, Suicheng; Meng, Xin; Sciurba, Frank C.; Wang, Chen; Kaminski, Naftali; Pu, Jiantao

    2014-01-01

    A registration scheme termed as B-spline affine transformation (BSAT) is presented in this study to elastically align two images. We define an affine transformation instead of the traditional translation at each control point. Mathematically, BSAT is a generalized form of the affine transformation and the traditional B-Spline transformation (BST). In order to improve the performance of the iterative closest point (ICP) method in registering two homologous shapes but with large deformation, a bi-directional instead of the traditional unidirectional objective / cost function is proposed. In implementation, the objective function is formulated as a sparse linear equation problem, and a sub-division strategy is used to achieve a reasonable efficiency in registration. The performance of the developed scheme was assessed using both two-dimensional (2D) synthesized dataset and three-dimensional (3D) volumetric computed tomography (CT) data. Our experiments showed that the proposed B-spline affine model could obtain reasonable registration accuracy. PMID:24530210

  9. Bidirectional elastic image registration using B-spline affine transformation.

    PubMed

    Gu, Suicheng; Meng, Xin; Sciurba, Frank C; Ma, Hongxia; Leader, Joseph; Kaminski, Naftali; Gur, David; Pu, Jiantao

    2014-06-01

    A registration scheme termed as B-spline affine transformation (BSAT) is presented in this study to elastically align two images. We define an affine transformation instead of the traditional translation at each control point. Mathematically, BSAT is a generalized form of the affine transformation and the traditional B-spline transformation (BST). In order to improve the performance of the iterative closest point (ICP) method in registering two homologous shapes but with large deformation, a bidirectional instead of the traditional unidirectional objective/cost function is proposed. In implementation, the objective function is formulated as a sparse linear equation problem, and a sub-division strategy is used to achieve a reasonable efficiency in registration. The performance of the developed scheme was assessed using both two-dimensional (2D) synthesized dataset and three-dimensional (3D) volumetric computed tomography (CT) data. Our experiments showed that the proposed B-spline affine model could obtain reasonable registration accuracy. PMID:24530210

  10. AnL1 smoothing spline algorithm with cross validation

    NASA Astrophysics Data System (ADS)

    Bosworth, Ken W.; Lall, Upmanu

    1993-08-01

    We propose an algorithm for the computation ofL1 (LAD) smoothing splines in the spacesWM(D), with . We assume one is given data of the formyiD(f(ti) +ɛi, iD1,...,N with {itti}iD1N ⊂D, theɛi are errors withE(ɛi)D0, andf is assumed to be inWM. The LAD smoothing spline, for fixed smoothing parameterλ?;0, is defined as the solution,sλ, of the optimization problem (1/N)∑iD1N yi-g(ti +λJM(g), whereJM(g) is the seminorm consisting of the sum of the squaredL2 norms of theMth partial derivatives ofg. Such an LAD smoothing spline,sλ, would be expected to give robust smoothed estimates off in situations where theɛi are from a distribution with heavy tails. The solution to such a problem is a "thin plate spline" of known form. An algorithm for computingsλ is given which is based on considering a sequence of quadratic programming problems whose structure is guided by the optimality conditions for the above convex minimization problem, and which are solved readily, if a good initial point is available. The "data driven" selection of the smoothing parameter is achieved by minimizing aCV(λ) score of the form .The combined LAD-CV smoothing spline algorithm is a continuation scheme in λ↘0 taken on the above SQPs parametrized inλ, with the optimal smoothing parameter taken to be that value ofλ at which theCV(λ) score first begins to increase. The feasibility of constructing the LAD-CV smoothing spline is illustrated by an application to a problem in environment data interpretation.

  11. How to fly an aircraft with control theory and splines

    NASA Technical Reports Server (NTRS)

    Karlsson, Anders

    1994-01-01

    When trying to fly an aircraft as smoothly as possible it is a good idea to use the derivatives of the pilot command instead of using the actual control. This idea was implemented with splines and control theory, in a system that tries to model an aircraft. Computer calculations in Matlab show that it is impossible to receive enough smooth control signals by this way. This is due to the fact that the splines not only try to approximate the test function, but also its derivatives. A perfect traction is received but we have to pay in very peaky control signals and accelerations.

  12. NEURAL NETWORK AND REGRESSION SPLINE VALUE FUNCTION APPROXIMATIONS FOR STOCHASTIC DYNAMIC PROGRAMMING. (R828207)

    EPA Science Inventory

    The perspectives, information and conclusions conveyed in research project abstracts, progress reports, final reports, journal abstracts and journal publications convey the viewpoints of the principal investigator and may not represent the views and policies of ORD and EPA. Concl...

  13. Distributed parameter system coupled ARMA expansion identification and adaptive parallel IIR filtering - A unified problem statement. [Auto Regressive Moving-Average

    NASA Technical Reports Server (NTRS)

    Johnson, C. R., Jr.; Balas, M. J.

    1980-01-01

    A novel interconnection of distributed parameter system (DPS) identification and adaptive filtering is presented, which culminates in a common statement of coupled autoregressive, moving-average expansion or parallel infinite impulse response configuration adaptive parameterization. The common restricted complexity filter objectives are seen as similar to the reduced-order requirements of the DPS expansion description. The interconnection presents the possibility of an exchange of problem formulations and solution approaches not yet easily addressed in the common finite dimensional lumped-parameter system context. It is concluded that the shared problems raised are nevertheless many and difficult.

  14. Upsilon-quaternion splines for the smooth interpolation of orientations.

    PubMed

    Nielson, Gregory M

    2004-01-01

    We present a new method for smoothly interpolating orientation matrices. It is based upon quaternions and a particular construction of upsilon-spline curves. The new method has tension parameters and variable knot (time) spacing which both prove to be effective in designing and controlling key frame animations. PMID:15384647

  15. Approximation and modeling with ambient B-splines

    NASA Astrophysics Data System (ADS)

    Lehmann, N.; Maier, L.-B.; Odathuparambil, S.; Reif, U.

    2016-06-01

    We present a novel technique for solving approximation problems on manifolds in terms of standard tensor product B-splines. This method is easy to implement and provides optimal approximation order. Applications include the representation of smooth surfaces of arbitrary genus.

  16. Radial Splines Would Prevent Rotation Of Bearing Race

    NASA Technical Reports Server (NTRS)

    Kaplan, Ronald M.; Chokshi, Jaisukhlal V.

    1993-01-01

    Interlocking fine-pitch ribs and grooves formed on otherwise flat mating end faces of housing and outer race of rolling-element bearing to be mounted in housing, according to proposal. Splines bear large torque loads and impose minimal distortion on raceway.

  17. Computation Of An Optimal Laser Cavity Using Splines

    NASA Astrophysics Data System (ADS)

    Pantelic, Dejan V.; Janevski, Zoran D.

    1989-03-01

    As an attempt to improve the efficiency of a solid state laser cavity, a non-elliptical cavity is proposed. Efficiency was calculated by the ray trace method and the cavity was simulated using a novel approach with splines. Computation shows that substantial gain in efficiency can be achieved for a close coupled configuration.

  18. Extension of spline wavelets element method to membrane vibration analysis

    NASA Astrophysics Data System (ADS)

    Wu, C. W.; Chen, W.-H.

    1996-05-01

    The B-spline wavelets element technique developed by Chen and Wu (1995a) is extended to the membrane vibration analysis. The tensor product of the finite splines and spline wavelets expansions in different resolutions is applied in the development of a curved quadrilateral element. Unlike the process of direct wavelets adding in the previous work, the elemental displacement field represented by the coefficients of wavelets expansions is transformed into edges and internal modes via elemental geometric conditions and “two-scale relations”. The “multiple stages two-scale sequence” of quadratic B-spline function is provided to accelerate the sequential transformations between different resolution levels of wavelets. The hierarchical property of wavelets basis approximation is also reserved in this extension. For membrane vibration problems where variations lack regularity at certain lower vibration modes, the present element can still effectively provide accurate results through a multi-level solving procedure. Some numerical examples are studied to demonstrate the proposed element.

  19. Modelling Childhood Growth Using Fractional Polynomials and Linear Splines

    PubMed Central

    Tilling, Kate; Macdonald-Wallis, Corrie; Lawlor, Debbie A.; Hughes, Rachael A.; Howe, Laura D.

    2014-01-01

    Background There is increasing emphasis in medical research on modelling growth across the life course and identifying factors associated with growth. Here, we demonstrate multilevel models for childhood growth either as a smooth function (using fractional polynomials) or a set of connected linear phases (using linear splines). Methods We related parental social class to height from birth to 10 years of age in 5,588 girls from the Avon Longitudinal Study of Parents and Children (ALSPAC). Multilevel fractional polynomial modelling identified the best-fitting model as being of degree 2 with powers of the square root of age, and the square root of age multiplied by the log of age. The multilevel linear spline model identified knot points at 3, 12 and 36 months of age. Results Both the fractional polynomial and linear spline models show an initially fast rate of growth, which slowed over time. Both models also showed that there was a disparity in length between manual and non-manual social class infants at birth, which decreased in magnitude until approximately 1 year of age and then increased. Conclusions Multilevel fractional polynomials give a more realistic smooth function, and linear spline models are easily interpretable. Each can be used to summarise individual growth trajectories and their relationships with individual-level exposures. PMID:25413651

  20. A new kind of splines and their use for fast ray-tracing in reflective cavities

    NASA Astrophysics Data System (ADS)

    Pantelic, Dejan V.; Janevski, Zoran D.

    1989-08-01

    In this paper we are presenting a new kind of splines that are very effective in ray-tracing applications. They are designed in such a way to enable the fast and efficient computation of line-spline intersections (line representing the light ray, and spline representing the reflective cavity). These splines are piecewise parabolic polynomials, but with additional degrees of freedom. Polynomial sections of the spline can be rotated to a certain angle (each section has its own angle of rotation), enabling thus the continuity of the first derivative.

  1. Steganalysis using logistic regression

    NASA Astrophysics Data System (ADS)

    Lubenko, Ivans; Ker, Andrew D.

    2011-02-01

    We advocate Logistic Regression (LR) as an alternative to the Support Vector Machine (SVM) classifiers commonly used in steganalysis. LR offers more information than traditional SVM methods - it estimates class probabilities as well as providing a simple classification - and can be adapted more easily and efficiently for multiclass problems. Like SVM, LR can be kernelised for nonlinear classification, and it shows comparable classification accuracy to SVM methods. This work is a case study, comparing accuracy and speed of SVM and LR classifiers in detection of LSB Matching and other related spatial-domain image steganography, through the state-of-art 686-dimensional SPAM feature set, in three image sets.

  2. A spline-based tool to assess and visualize the calibration of multiclass risk predictions.

    PubMed

    Van Hoorde, K; Van Huffel, S; Timmerman, D; Bourne, T; Van Calster, B

    2015-04-01

    When validating risk models (or probabilistic classifiers), calibration is often overlooked. Calibration refers to the reliability of the predicted risks, i.e. whether the predicted risks correspond to observed probabilities. In medical applications this is important because treatment decisions often rely on the estimated risk of disease. The aim of this paper is to present generic tools to assess the calibration of multiclass risk models. We describe a calibration framework based on a vector spline multinomial logistic regression model. This framework can be used to generate calibration plots and calculate the estimated calibration index (ECI) to quantify lack of calibration. We illustrate these tools in relation to risk models used to characterize ovarian tumors. The outcome of the study is the surgical stage of the tumor when relevant and the final histological outcome, which is divided into five classes: benign, borderline malignant, stage I, stage II-IV, and secondary metastatic cancer. The 5909 patients included in the study are randomly split into equally large training and test sets. We developed and tested models using the following algorithms: logistic regression, support vector machines, k nearest neighbors, random forest, naive Bayes and nearest shrunken centroids. Multiclass calibration plots are interesting as an approach to visualizing the reliability of predicted risks. The ECI is a convenient tool for comparing models, but is less informative and interpretable than calibration plots. In our case study, logistic regression and random forest showed the highest degree of calibration, and the naive Bayes the lowest. PMID:25579635

  3. Akima splines for minimization of breathing interference in aortic rheography data

    NASA Astrophysics Data System (ADS)

    Tsoy, Maria O.; Stiukhina, Elena S.; Klochkov, Victor A.; Postnov, Dmitry E.

    2015-03-01

    The elimination of low-frequency noise of breath and motion artifacts is one of the most difficult challenges of preprocessing rheographic signal. The data filtering is the conventional way to separate useful signal from noise and interferences. Conventionally, linear filtering is used to easy design and implementation. However, in some cases such techniques are difficult, if possible, to apply, since the data frequency range is overlapped with one of interferences. Specifically, it happens in aortic rheography, where some breathing process and pulmonary blood flow contributions are unavoidable. We suggest an alternative approach for breathing interference reduction, based on adaptive reconstruction of baseline deviation. Specifically, the computational scheme based on multiple calculation of Akima splines is suggested, implemented using C# language and validated using surrogate data. The applications of proposed technique to the real data processing deliver the better quality of aortic valve opening detection.

  4. Hierarchical Volume Representation with 3{radical}2 Subdivision and Trivariate B-Spline Wavelets

    SciTech Connect

    Linsen, L; Gray, JT; Pascucci, V; Duchaineau, M; Hamann, B

    2002-01-11

    Multiresolution methods provide a means for representing data at multiple levels of detail. They are typically based on a hierarchical data organization scheme and update rules needed for data value computation. We use a data organization that is based on what we call n{radical}2 subdivision. The main advantage of subdivision, compared to quadtree (n = 2) or octree (n = 3) organizations, is that the number of vertices is only doubled in each subdivision step instead of multiplied by a factor of four or eight, respectively. To update data values we use n-variate B-spline wavelets, which yields better approximations for each level of detail. We develop a lifting scheme for n = 2 and n = 3 based on the n{radical}2-subdivision scheme. We obtain narrow masks that could also provide a basis for view-dependent visualization and adaptive refinement.

  5. Data approximation using a blending type spline construction

    SciTech Connect

    Dalmo, Rune; Bratlie, Jostein

    2014-11-18

    Generalized expo-rational B-splines (GERBS) is a blending type spline construction where local functions at each knot are blended together by C{sup k}-smooth basis functions. One way of approximating discrete regular data using GERBS is by partitioning the data set into subsets and fit a local function to each subset. Partitioning and fitting strategies can be devised such that important or interesting data points are interpolated in order to preserve certain features. We present a method for fitting discrete data using a tensor product GERBS construction. The method is based on detection of feature points using differential geometry. Derivatives, which are necessary for feature point detection and used to construct local surface patches, are approximated from the discrete data using finite differences.

  6. On the role of exponential splines in image interpolation.

    PubMed

    Kirshner, Hagai; Porat, Moshe

    2009-10-01

    A Sobolev reproducing-kernel Hilbert space approach to image interpolation is introduced. The underlying kernels are exponential functions and are related to stochastic autoregressive image modeling. The corresponding image interpolants can be implemented effectively using compactly-supported exponential B-splines. A tight l(2) upper-bound on the interpolation error is then derived, suggesting that the proposed exponential functions are optimal in this regard. Experimental results indicate that the proposed interpolation approach with properly-tuned, signal-dependent weights outperforms currently available polynomial B-spline models of comparable order. Furthermore, a unified approach to image interpolation by ideal and nonideal sampling procedures is derived, suggesting that the proposed exponential kernels may have a significant role in image modeling as well. Our conclusion is that the proposed Sobolev-based approach could be instrumental and a preferred alternative in many interpolation tasks. PMID:19520639

  7. Monotonicity preserving splines using rational Ball cubic interpolation

    NASA Astrophysics Data System (ADS)

    Zakaria, Wan Zafira Ezza Wan; Jamal, Ena; Ali, Jamaludin Md.

    2015-10-01

    In scientific application and Computer Aided Design (CAD), users usually need to generate a spline passing through a given set of data which preserves certain shape properties of the data such as positivity, monotonicity or convexity [1]. The required curves have to be a smooth shape-preserving interpolation. In this paper a rational cubic spline in Ball representation is developed to generate an interpolant that preserves monotonicity. In this paper to control the shape of the interpolant three shape parameters are introduced. The shape parameters in the description of the rational cubic interpolation are subjected to monotonicity constrained. The necessary and sufficient conditions of the rational cubic interpolation are derived and visually the proposed rational cubic interpolant gives a very pleasing result.

  8. High-order numerical solutions using cubic splines

    NASA Technical Reports Server (NTRS)

    Rubin, S. G.; Khosla, P. K.

    1975-01-01

    The cubic spline collocation procedure for the numerical solution of partial differential equations was reformulated so that the accuracy of the second-derivative approximation is improved and parallels that previously obtained for lower derivative terms. The final result is a numerical procedure having overall third-order accuracy for a nonuniform mesh and overall fourth-order accuracy for a uniform mesh. Application of the technique was made to the Burger's equation, to the flow around a linear corner, to the potential flow over a circular cylinder, and to boundary layer problems. The results confirmed the higher-order accuracy of the spline method and suggest that accurate solutions for more practical flow problems can be obtained with relatively coarse nonuniform meshes.

  9. Tensorial Basis Spline Collocation Method for Poisson's Equation

    NASA Astrophysics Data System (ADS)

    Plagne, Laurent; Berthou, Jean-Yves

    2000-01-01

    This paper aims to describe the tensorial basis spline collocation method applied to Poisson's equation. In the case of a localized 3D charge distribution in vacuum, this direct method based on a tensorial decomposition of the differential operator is shown to be competitive with both iterative BSCM and FFT-based methods. We emphasize the O(h4) and O(h6) convergence of TBSCM for cubic and quintic splines, respectively. We describe the implementation of this method on a distributed memory parallel machine. Performance measurements on a Cray T3E are reported. Our code exhibits high performance and good scalability: As an example, a 27 Gflops performance is obtained when solving Poisson's equation on a 2563 non-uniform 3D Cartesian mesh by using 128 T3E-750 processors. This represents 215 Mflops per processors.

  10. Regression-based oxides of nitrogen predictors for three diesel engine technologies.

    PubMed

    Chen, Xiaohan; Schmid, Natalia A; Wang, Lijuan; Clark, Nigel N

    2010-01-01

    Models of diesel engine emissions such as oxides of nitrogen (NO(x)) are valuable when they can predict instantaneous values because they can be incorporated into whole vehicle models, support inventory predictions, and assist in developing superior engine and aftertreatment control strategies. Recent model-year diesel engines using multiple injection strategies, exhaust gas recirculation, and variable geometry turbocharging may have more transient sensitivity and demand more sophisticated modeling than for legacy engines. Emissions data from 1992, 1999, and 2004 model-year U.S. truck engines were modeled separately using a linear approach (with transient terms) and multivariate adaptive regression splines (MARS), an adaptive piece-wise regression approach that has limited prior use for emissions prediction. Six input variables based on torque, speed, power, and their derivatives were used for MARS. Emissions time delay was considered for both models. Manifold air temperature (MAT) and manifold air pressure (MAP) were further used in NO(x) modeling to build a plug-in model. The predictive performance for instantaneous NO(x) on part of the certification transient test procedure (Federal Test Procedure [FTP]) of the 2004 engine MARS was lower (R2 = 0.949) than the performance for the 1992 (R2 = 0.981) and 1999 (R2 = 0.988) engines. Linear regression performed similarly for the 1992 and 1999 engines but performed poorly (R2 = 0.896) for the 2004 engine. The MARS performance varied substantially when data from different cycles were used. Overall, the MAP and MAT plug-in model trained by MARS was the best, but the performance differences between LR and MARS were not substantial. PMID:20102037

  11. Stiffness calculation and application of spline-ball bearing

    NASA Astrophysics Data System (ADS)

    Gu, Bo-Zhong; Zhou, Yu-Ming; Yang, De-Hua

    2006-12-01

    Spline-ball bearing is widely adopted in large precision instruments because of its distinctive performance. For the sake of carrying out detail investigation of a full instrument system, practical stiffness formulae of such bearing are introduced with elastic contact mechanics, which are successfully applied for calculating the stiffness of the bearing used in astronomical telescope. Appropriate treatment of the stiffness of such bearing in the finite element analysis is also discussed and illustrated.

  12. Control theory and splines, applied to signature storage

    NASA Technical Reports Server (NTRS)

    Enqvist, Per

    1994-01-01

    In this report the problem we are going to study is the interpolation of a set of points in the plane with the use of control theory. We will discover how different systems generate different kinds of splines, cubic and exponential, and investigate the effect that the different systems have on the tracking problems. Actually we will see that the important parameters will be the two eigenvalues of the control matrix.

  13. Application of integrodifferential splines to solving an interpolation problem

    NASA Astrophysics Data System (ADS)

    Burova, I. G.; Rodnikova, O. V.

    2014-12-01

    This paper deals with cases when the values of derivatives of a function are given at grid nodes or the values of integrals of a function over grid intervals are known. Polynomial and trigonometric integrodifferential splines for computing the value of a function from given values of its nodal derivatives and/or from its integrals over grid intervals are constructed. Error estimates are obtained, and numerical results are presented.

  14. Explicit B-spline regularization in diffeomorphic image registration

    PubMed Central

    Tustison, Nicholas J.; Avants, Brian B.

    2013-01-01

    Diffeomorphic mappings are central to image registration due largely to their topological properties and success in providing biologically plausible solutions to deformation and morphological estimation problems. Popular diffeomorphic image registration algorithms include those characterized by time-varying and constant velocity fields, and symmetrical considerations. Prior information in the form of regularization is used to enforce transform plausibility taking the form of physics-based constraints or through some approximation thereof, e.g., Gaussian smoothing of the vector fields [a la Thirion's Demons (Thirion, 1998)]. In the context of the original Demons' framework, the so-called directly manipulated free-form deformation (DMFFD) (Tustison et al., 2009) can be viewed as a smoothing alternative in which explicit regularization is achieved through fast B-spline approximation. This characterization can be used to provide B-spline “flavored” diffeomorphic image registration solutions with several advantages. Implementation is open source and available through the Insight Toolkit and our Advanced Normalization Tools (ANTs) repository. A thorough comparative evaluation with the well-known SyN algorithm (Avants et al., 2008), implemented within the same framework, and its B-spline analog is performed using open labeled brain data and open source evaluation tools. PMID:24409140

  15. Regression: A Bibliography.

    ERIC Educational Resources Information Center

    Pedrini, D. T.; Pedrini, Bonnie C.

    Regression, another mechanism studied by Sigmund Freud, has had much research, e.g., hypnotic regression, frustration regression, schizophrenic regression, and infra-human-animal regression (often directly related to fixation). Many investigators worked with hypnotic age regression, which has a long history, going back to Russian reflexologists.…

  16. Flexible regression models over river networks

    PubMed Central

    O’Donnell, David; Rushworth, Alastair; Bowman, Adrian W; Marian Scott, E; Hallard, Mark

    2014-01-01

    Many statistical models are available for spatial data but the vast majority of these assume that spatial separation can be measured by Euclidean distance. Data which are collected over river networks constitute a notable and commonly occurring exception, where distance must be measured along complex paths and, in addition, account must be taken of the relative flows of water into and out of confluences. Suitable models for this type of data have been constructed based on covariance functions. The aim of the paper is to place the focus on underlying spatial trends by adopting a regression formulation and using methods which allow smooth but flexible patterns. Specifically, kernel methods and penalized splines are investigated, with the latter proving more suitable from both computational and modelling perspectives. In addition to their use in a purely spatial setting, penalized splines also offer a convenient route to the construction of spatiotemporal models, where data are available over time as well as over space. Models which include main effects and spatiotemporal interactions, as well as seasonal terms and interactions, are constructed for data on nitrate pollution in the River Tweed. The results give valuable insight into the changes in water quality in both space and time. PMID:25653460

  17. On the functional equivalence of fuzzy inference systems and spline-based networks.

    PubMed

    Hunt, K J; Haas, R; Brown, M

    1995-06-01

    The conditions under which spline-based networks are functionally equivalent to the Takagi-Sugeno-model of fuzzy inference are formally established. We consider a generalized form of basis function network whose basis functions are splines. The result admits a wide range of fuzzy membership functions which are commonly encountered in fuzzy systems design. We use the theoretical background of functional equivalence to develop a hybrid fuzzy-spline net for inverse dynamic modeling of a hydraulically driven robot manipulator. PMID:7496588

  18. A strategy for multivariate calibration based on modified single-index signal regression: Capturing explicit non-linearity and improving prediction accuracy

    NASA Astrophysics Data System (ADS)

    Zhang, Xiaoyu; Li, Qingbo; Zhang, Guangjun

    2013-11-01

    In this paper, a modified single-index signal regression (mSISR) method is proposed to construct a nonlinear and practical model with high-accuracy. The mSISR method defines the optimal penalty tuning parameter in P-spline signal regression (PSR) as initial tuning parameter and chooses the number of cycles based on minimizing root mean squared error of cross-validation (RMSECV). mSISR is superior to single-index signal regression (SISR) in terms of accuracy, computation time and convergency. And it can provide the character of the non-linearity between spectra and responses in a more precise manner than SISR. Two spectra data sets from basic research experiments, including plant chlorophyll nondestructive measurement and human blood glucose noninvasive measurement, are employed to illustrate the advantages of mSISR. The results indicate that the mSISR method (i) obtains the smooth and helpful regression coefficient vector, (ii) explicitly exhibits the type and amount of the non-linearity, (iii) can take advantage of nonlinear features of the signals to improve prediction performance and (iv) has distinct adaptability for the complex spectra model by comparing with other calibration methods. It is validated that mSISR is a promising nonlinear modeling strategy for multivariate calibration.

  19. Design Evaluation of Wind Turbine Spline Couplings Using an Analytical Model: Preprint

    SciTech Connect

    Guo, Y.; Keller, J.; Wallen, R.; Errichello, R.; Halse, C.; Lambert, S.

    2015-02-01

    Articulated splines are commonly used in the planetary stage of wind turbine gearboxes for transmitting the driving torque and improving load sharing. Direct measurement of spline loads and performance is extremely challenging because of limited accessibility. This paper presents an analytical model for the analysis of articulated spline coupling designs. For a given torque and shaft misalignment, this analytical model quickly yields insights into relationships between the spline design parameters and resulting loads; bending, contact, and shear stresses; and safety factors considering various heat treatment methods. Comparisons of this analytical model against previously published computational approaches are also presented.

  20. A numerical method of finding potentiometric titration end-points by use of approximative spline functions.

    PubMed

    Ren, K

    1990-07-01

    A new numerical method of determining potentiometric titration end-points is presented. It consists in calculating the coefficients of approximative spline functions describing the experimental data (e.m.f., volume of titrant added). The end-point (the inflection point of the curve) is determined by calculating zero points of the second derivative of the approximative spline function. This spline function, unlike rational spline functions, is free from oscillations and its course is largely independent of random errors in e.m.f. measurements. The proposed method is useful for direct analysis of titration data and especially as a basis for construction of microcomputer-controlled automatic titrators. PMID:18964999

  1. Simulation study for model performance of multiresponse semiparametric regression

    NASA Astrophysics Data System (ADS)

    Wibowo, Wahyu; Haryatmi, Sri; Budiantara, I. Nyoman

    2015-12-01

    The objective of this paper is to evaluate the performance of multiresponse semiparametric regression model based on both of the function types and sample sizes. In general, multiresponse semiparametric regression model consists of parametric and nonparametric functions. This paper focuses on both linear and quadratic functions for parametric components and spline function for nonparametric component. Moreover, this model could also be seen as a spline semiparametric seemingly unrelated regression model. Simulation study is conducted by evaluating three combinations of parametric and nonparametric components, i.e. linear-trigonometric, quadratic-exponential, and multiple linear-polynomial functions respectively. Two criterias are used for assessing the model performance, i.e. R-square and Mean Square Error (MSE). The results show that both of the function types and sample sizes have significantly influenced to the model performance. In addition, this multiresponse semiparametric regression model yields the best performance at the small sample size and combination between multiple linear and polynomial functions as parametric and nonparametric components respectively. Moreover, the model performances at the big sample size tend to be similar for any combination of parametric and nonparametric components.

  2. Achieving high data reduction with integral cubic B-splines

    NASA Technical Reports Server (NTRS)

    Chou, Jin J.

    1993-01-01

    During geometry processing, tangent directions at the data points are frequently readily available from the computation process that generates the points. It is desirable to utilize this information to improve the accuracy of curve fitting and to improve data reduction. This paper presents a curve fitting method which utilizes both position and tangent direction data. This method produces G(exp 1) non-rational B-spline curves. From the examples, the method demonstrates very good data reduction rates while maintaining high accuracy in both position and tangent direction.

  3. Use of tensor product splines in magnet optimization

    SciTech Connect

    Davey, K.R. )

    1999-05-01

    Variational Metrics and other direct search techniques have proved useful in magnetic optimization. At least one technique used in magnetic optimization is to first fit the data of the desired optimization parameter to the data. If this fit is smoothly differentiable, a number of powerful techniques become available for the optimization. The author shows the usefulness of tensor product splines in accomplishing this end. Proper choice of augmented knot placement not only makes the fit very accurate, but allows for differentiation. Thus the gradients required with direct optimization in divariate and trivariate applications are robustly generated.

  4. n-dimensional non uniform rational b-splines for metamodeling

    SciTech Connect

    Turner, Cameron J; Crawford, Richard H

    2008-01-01

    Non Uniform Rational B-splines (NURBs) have unique properties that make them attractive for engineering metamodeling applications. NURBs are known to accurately model many different continuous curve and surface topologies in 1- and 2-variate spaces. However, engineering metamodels of the design space often require hypervariate representations of multidimensional outputs. In essence, design space metamodels are hyperdimensional constructs with a dimensionality determined by their input and output variables. To use NURBs as the basis for a metamodel in a hyperdimensional space, traditional geometric fitting techniques must be adapted to hypervariate and hyperdimensional spaces composed of both continuous and discontinuous variable types. In this paper, they describe the necessary adaptations for the development of a NURBs-based metamodel called a Hyperdimensional Performance Model or HyPerModel. HyPerModels are capable of accurately and reliably modeling nonlinear hyperdimensional objects defined by both continuous and discontinuous variables of a wide variety of topologies, such as those that define typical engineering design spaces. They demonstrate this ability by successfully generating accurate HyPerModels of 10 trial functions laying the foundation for future work with N-dimensional NURBs in design space applications.

  5. N-dimensional non uniform rational B-splines for metamodeling

    SciTech Connect

    Turner, Cameron J; Crawford, Richard H

    2008-01-01

    Non Uniform Rational B-splines (NURBs) have unique properties that make them attractive for engineering metamodeling applications. NURBs are known to accurately model many different continuous curve and surface topologies in 1-and 2-variate spaces. However, engineering metamodels of the design space often require hypervariate representations of multidimensional outputs. In essence, design space metamodels are hyperdimensional constructs with a dimensionality determined by their input and output variables. To use NURBs as the basis for a metamodel in a hyperdimensional space, traditional geometric fitting techniques must be adapted to hypervariate and hyperdimensional spaces composed of both continuous and discontinuous variable types. In this paper, we describe the necessary adaptations for the development of a NURBs-based metamodel called a Hyperdimensional Performance Model or HyPerModel. HyPerModels are capable of accurately and reliably modeling nonlinear hyperdimensional objects defined by both continuous and discontinuous variables of a wide variety of topologies, such as those that define typical engineering design spaces. We demonstrate this ability by successfully generating accurate HyPerModels of 10 trial functions laying the foundation for future work with N-dimensional NURBs in design space applications.

  6. Systolic algorithms for B-spline patch generation

    SciTech Connect

    Megson, G.M. )

    1991-03-01

    This paper describes a systolic array for constructing the blending functions of B-spline curves and surfaces to be 7k times faster than the equivalent sequential computation. The array requires just 5k inner product cell equivalents, where k - 1 is the maximum degree of the blending function polynomials. This array is then used as a basis for a composite systolic architecture for generating single or multiple points on a B-spline curve or surface. The total hardware requirement is bounded by 5 max (k, l) + 3 (max(m,n) + 1) inner product cells and O(mn) registers, where m and n are the numbers of control points in the two available directions. The hardware can be reduced to 5 max(k, l) + max(m,n) + 1 if each component of a point is generated by separate passes of data through the array. Equations for the array speed-up are given and likely speed-ups for different sized patches considered.

  7. Spacecraft Orbit Determination with The B-spline Approximation Method

    NASA Astrophysics Data System (ADS)

    Song, Ye-zhi; Huang, Yong; Hu, Xiao-gong; Li, Pei-jia; Cao, Jian-feng

    2014-04-01

    It is known that the dynamical orbit determination is the most common way to get the precise orbits of spacecraft. However, it is hard to build up the precise dynamical model of spacecraft sometimes. In order to solve this problem, the technique of the orbit determination with the B-spline approximation method based on the theory of function approximation is presented in this article. In order to verify the effectiveness of this method, simulative orbit determinations in the cases of LEO (Low Earth Orbit), MEO (Medium Earth Orbit), and HEO (Highly Eccentric Orbit) satellites are performed, and it is shown that this method has a reliable accuracy and stable solution. The approach can be performed in both the conventional celestial coordinate system and the conventional terrestrial coordinate system. The spacecraft's position and velocity can be calculated directly with the B-spline approximation method, it needs not to integrate the dynamical equations, nor to calculate the state transfer matrix, thus the burden of calculations in the orbit determination is reduced substantially relative to the dynamical orbit determination method. The technique not only has a certain theoretical significance, but also can serve as a conventional algorithm in the spacecraft orbit determination.

  8. Spacecraft Orbit Determination with B Spline Approximation Method

    NASA Astrophysics Data System (ADS)

    Song, Y. Z.; Huang, Y.; Hu, X. G.; Li, P. J.; Cao, J. F.

    2013-07-01

    It is known that the dynamical orbit determination is the most common way to get the precise orbit of spacecraft. However, it is hard to describe the precise orbit of spacecraft sometimes. In order to solve this problem, the technique of the orbit determination with the B spline approximation method based on the theory of function approximation is presented in this article. Several simulation cases of the orbit determination including LEO (Low Earth Orbit), MEO (Medium Earth Orbit), and HEO (Highly Eccentric Orbit) satellites are performed, and it is shown that the accuracy of this method is reliable and stable.The approach can be performed in the conventional celestial coordinate system and conventional terrestrial coordinate system.The spacecraft's position and velocity can be calculated directly with the B spline approximation method, which means that it is unnecessary to integrate the dynamics equations and variational equations. In that case, it makes the calculation amount of orbit determination reduce substantially relative to the dynamical orbit determination method. The technique not only has a certain theoretical significance, but also can be as a conventional algorithm in the spacecraft orbit determination.

  9. An analytic reconstruction method for PET based on cubic splines

    NASA Astrophysics Data System (ADS)

    Kastis, George A.; Kyriakopoulou, Dimitra; Fokas, Athanasios S.

    2014-03-01

    PET imaging is an important nuclear medicine modality that measures in vivo distribution of imaging agents labeled with positron-emitting radionuclides. Image reconstruction is an essential component in tomographic medical imaging. In this study, we present the mathematical formulation and an improved numerical implementation of an analytic, 2D, reconstruction method called SRT, Spline Reconstruction Technique. This technique is based on the numerical evaluation of the Hilbert transform of the sinogram via an approximation in terms of 'custom made' cubic splines. It also imposes sinogram thresholding which restricts reconstruction only within object pixels. Furthermore, by utilizing certain symmetries it achieves a reconstruction time similar to that of FBP. We have implemented SRT in the software library called STIR and have evaluated this method using simulated PET data. We present reconstructed images from several phantoms. Sinograms have been generated at various Poison noise levels and 20 realizations of noise have been created at each level. In addition to visual comparisons of the reconstructed images, the contrast has been determined as a function of noise level. Further analysis includes the creation of line profiles when necessary, to determine resolution. Numerical simulations suggest that the SRT algorithm produces fast and accurate reconstructions at realistic noise levels. The contrast is over 95% in all phantoms examined and is independent of noise level.

  10. ABCs and fourth-order spline collocation for the solution of two-point boundary value problems over an infinite domain

    NASA Astrophysics Data System (ADS)

    Khoury, S.; Ibdah, H.; Sayfy, A.

    2013-10-01

    A mixed approach, based on cubic B-spline collocation and asymptotic boundary conditions (ABCs), is presented for the numerical solution of an extended class of two-point linear boundary value problems (BVPs) over an infinite interval as well as a system of BVPs. The condition at infinity is reduced to an asymptotic boundary condition that approaches the required value at infinity over a large finite interval. The resulting problem is handled using an adaptive spline collocation approach constructed over uniform meshes. The rate of convergence is verified numerically to be of fourth-order. The efficiency and applicability of the method are demonstrated by applying the strategy to a number of examples. The numerical solutions are compared with existing analytical solutions.

  11. Hierarchical Representation of Time-Varying Volume Data with Fourth-Root-of-Two Subdivision and Quadrilinear B-Spline Wavelets

    SciTech Connect

    Linsen, L; Pascucci, V; Duchaineau, M A; Hamann, B; Joy, K I

    2002-11-19

    Multiresolution methods for representing data at multiple levels of detail are widely used for large-scale two- and three-dimensional data sets. We present a four-dimensional multiresolution approach for time-varying volume data. This approach supports a hierarchy with spatial and temporal scalability. The hierarchical data organization is based on 4{radical}2 subdivision. The n{radical}2-subdivision scheme only doubles the overall number of grid points in each subdivision step. This fact leads to fine granularity and high adaptivity, which is especially desirable in the spatial dimensions. For high-quality data approximation on each level of detail, we use quadrilinear B-spline wavelets. We present a linear B-spline wavelet lighting scheme based on n{radical}2 subdivision to obtain narrow masks for the update rules. Narrow masks provide a basis for out-of-core data exploration techniques and view-dependent visualization of sequences of time steps.

  12. Modeling spatial trajectories in dynamics testing using basis splines: application to tracking human volunteers in low-speed frontal impacts.

    PubMed

    Samuels, Marina A; Reed, Matthew P; Arbogast, Kristy B; Seacrist, Thomas

    2016-01-01

    Designing motor vehicle safety systems requires knowledge of whole body kinematics during dynamic loading for occupants of varying size and age, often obtained from sled tests with postmortem human subjects and human volunteers. Recently, we reported pediatric and adult responses in low-speed (<4 g) automotive-like impacts, noting reductions in maximum excursion with increasing age. Since the time-based trajectory shape is also relevant for restraint design, this study quantified the time-series trajectories using basis splines and developed a statistical model for predicting trajectories as a function of body dimension or age. Previously collected trajectories of the head, spine, and pelvis were modeled using cubic basis splines with eight control points. A principal component analysis was conducted on the control points and related to erect seated height using a linear regression model. The resulting statistical model quantified how trajectories became shorter and flatter with increasing body size, corresponding to the validation data-set. Trajectories were then predicted for erect seated heights corresponding to pediatric and adult anthropomorphic test devices (ATDs), thus generating performance criteria for the ATDs based on human response. This statistical model can be used to predict trajectories for a subject of specified anthropometry and utilized in subject-specific computational models of occupant response. PMID:26428257

  13. Kernel Continuum Regression.

    PubMed

    Lee, Myung Hee; Liu, Yufeng

    2013-12-01

    The continuum regression technique provides an appealing regression framework connecting ordinary least squares, partial least squares and principal component regression in one family. It offers some insight on the underlying regression model for a given application. Moreover, it helps to provide deep understanding of various regression techniques. Despite the useful framework, however, the current development on continuum regression is only for linear regression. In many applications, nonlinear regression is necessary. The extension of continuum regression from linear models to nonlinear models using kernel learning is considered. The proposed kernel continuum regression technique is quite general and can handle very flexible regression model estimation. An efficient algorithm is developed for fast implementation. Numerical examples have demonstrated the usefulness of the proposed technique. PMID:24058224

  14. Item Response Theory with Estimation of the Latent Population Distribution Using Spline-Based Densities

    ERIC Educational Resources Information Center

    Woods, Carol M.; Thissen, David

    2006-01-01

    The purpose of this paper is to introduce a new method for fitting item response theory models with the latent population distribution estimated from the data using splines. A spline-based density estimation system provides a flexible alternative to existing procedures that use a normal distribution, or a different functional form, for the…

  15. A comparison of thin-plate splines with automatic correspondences and B-splines with uniform grids for multimodal prostate registration

    NASA Astrophysics Data System (ADS)

    Mitra, Jhimli; Marti, Robert; Oliver, Arnau; Llado, Xavier; Vilanova, Joan C.; Meriaudeau, Fabrice

    2011-03-01

    This paper provides a comparison of spline-based registration methods applied to register interventional Trans Rectal Ultrasound (TRUS) and pre-acquired Magnetic Resonance (MR) prostate images for needle guided prostate biopsy. B-splines and Thin-plate Splines (TPS) are the most prevalent spline-based approaches to achieve deformable registration. Pertaining to the strategic selection of correspondences for the TPS registration, we use an automatic method already proposed in our previous work to generate correspondences in the MR and US prostate images. The method exploits the prostate geometry with the principal components of the segmented prostate as the underlying framework and involves a triangulation approach. The correspondences are generated with successive refinements and Normalized Mutual Information (NMI) is employed to determine the optimal number of correspondences required to achieve TPS registration. B-spline registration with successive grid refinements are consecutively applied for a significant comparison of the impact of the strategically chosen correspondences on the TPS registration against the uniform B-spline control grids. The experimental results are validated on 4 patient datasets. Dice Similarity Coefficient (DSC) is used as a measure of the registration accuracy. Average DSC values of 0.97+/-0.01 and 0.95+/-0.03 are achieved for the TPS and B-spline registrations respectively. B-spline registration is observed to be more computationally expensive than the TPS registration with average execution times of 128.09 +/- 21.7 seconds and 62.83 +/- 32.77 seconds respectively for images with maximum width of 264 pixels and a maximum height of 211 pixels.

  16. TWO-LEVEL TIME MARCHING SCHEME USING SPLINES FOR SOLVING THE ADVECTION EQUATION. (R826371C004)

    EPA Science Inventory

    A new numerical algorithm using quintic splines is developed and analyzed: quintic spline Taylor-series expansion (QSTSE). QSTSE is an Eulerian flux-based scheme that uses quintic splines to compute space derivatives and Taylor series expansion to march in time. The new scheme...

  17. Efficient Shape Priors for Spline-Based Snakes.

    PubMed

    Delgado-Gonzalo, Ricard; Schmitter, Daniel; Uhlmann, Virginie; Unser, Michael

    2015-11-01

    Parametric active contours are an attractive approach for image segmentation, thanks to their computational efficiency. They are driven by application-dependent energies that reflect the prior knowledge on the object to be segmented. We propose an energy involving shape priors acting in a regularization-like manner. Thereby, the shape of the snake is orthogonally projected onto the space that spans the affine transformations of a given shape prior. The formulation of the curves is continuous, which provides computational benefits when compared with landmark-based (discrete) methods. We show that this approach improves the robustness and quality of spline-based segmentation algorithms, while its computational overhead is negligible. An interactive and ready-to-use implementation of the proposed algorithm is available and was successfully tested on real data in order to segment Drosophila flies and yeast cells in microscopic images. PMID:26353353

  18. Modeling human spine using dynamic spline approach for vibrational simulation

    NASA Astrophysics Data System (ADS)

    Valentini, Pier Paolo

    2012-12-01

    This paper deals with the description of an innovative numerical dynamic model of the human spine for vibrational behavior assessment. The modeling approach is based on the use of the dynamic spline formalism in order to achieve a condensed description requiring a smaller set of variables but maintaining the nonlinear characteristic and the accuracy of a fully multibody dynamic model. The methodology has been validated by comparing the modal behavior of the spine sub-assembly to other models available in literature. Moreover, the proposed dynamic sub-system has been integrated into a two dimensional multibody model of a seated vehicle occupant in order to compute the seat-to-head transmissibility. This characteristic has been compared to those obtained using other spine sub-models. Both modal behavior and acceleration transmissibility computed with the proposed approach show a very good accordance with others coming from more complex models.

  19. An Algebraic Spline Model of Molecular Surfaces for Energetic Computations

    PubMed Central

    Zhao, Wenqi; Bajaj, Chandrajit; Xu, Guoliang

    2009-01-01

    In this paper, we describe a new method to generate a smooth algebraic spline (AS) approximation of the molecular surface (MS) based on an initial coarse triangulation derived from the atomic coordinate information of the biomolecule, resident in the PDB (Protein data bank). Our method first constructs a triangular prism scaffold covering the PDB structure, and then generates a piecewise polynomial F on the Bernstein-Bezier (BB) basis within the scaffold. An ASMS model of the molecular surface is extracted as the zero contours of F which is nearly C1 and has dual implicit and parametric representations. The dual representations allow us easily do the point sampling on the ASMS model and apply it to the accurate estimation of the integrals involved in the electrostatic solvation energy computations. Meanwhile comparing with the trivial piecewise linear surface model, fewer number of sampling points are needed for the ASMS, which effectively reduces the complexity of the energy estimation. PMID:21519111

  20. Growth curve analysis for plasma profiles using smoothing splines. Annual progress report, June 1992--June 1993

    SciTech Connect

    Imre, K.

    1993-05-01

    We are developing a profile analysis code for the statistical estimation of the parametric dependencies of the temperature and density profiles in tokamaks. Our code uses advanced statistical techniques to determine the optimal fit, i.e. the fit which minimized the predictive error. For a forty TFTR Ohmic profile dataset, our preliminary results indicate that the profile shape depends almost exclusively on q{sub a}{prime} but that the shape dependencies are not Gaussian. We are now comparing various shape models on the TFTR data. In the first six months, we have completed the core modules of the code, including a B-spline package for variable knot locations, a data-based method to determine the optimal smoothing parameters, self-consistent estimation of the bias errors, and adaptive fitting near the plasma edge. Visualization graphics already include three dimensional surface plots, and discharge by discharge plots of the predicted curves with error bars together with the actual measurements values, and plots of the basis functions with errors.

  1. Sensorless Interaction Force Control Based on B-Spline Function for Human-Robot Systems

    NASA Astrophysics Data System (ADS)

    Mitsantisuk, Chowarit; Katsura, Seiichiro; Ohishi, Kiyoshi

    In this paper, to provide precise force sensation of human operator, a twin direct-drive motor system with wire rope mechanism has been developed. The human-robot interaction force and the wire rope tension are independently controlled in acceleration dimension by realizing the dual disturbance observer based on modal space design. In the common mode, it is utilized for control of vibration suppression and wire rope tension. In the differential mode, the purity of human external force with compensation of friction force is obtained. This mode is useful for control of the interaction force of human. Furthermore, the human-robot system that has the ability of support of human interaction force is also proposed. The interaction force generation based on B-spline function is applied to automatically adjust the smooth force command corresponding to the adaptive parameters.
    To analyze the human movement stroke, the multi-sensor scheme is applied to fuse both two motor encoders and acceleration sensor signal by using Kalman filter. From the experimental results, the ability to design different level of assistive force makes it well suited to customized training programs due to time and human movement constraints.

  2. Multiple linear regression.

    PubMed

    Eberly, Lynn E

    2007-01-01

    This chapter describes multiple linear regression, a statistical approach used to describe the simultaneous associations of several variables with one continuous outcome. Important steps in using this approach include estimation and inference, variable selection in model building, and assessing model fit. The special cases of regression with interactions among the variables, polynomial regression, regressions with categorical (grouping) variables, and separate slopes models are also covered. Examples in microbiology are used throughout. PMID:18450050

  3. Experimental procedure for the evaluation of tooth stiffness in spline coupling including angular misalignment

    NASA Astrophysics Data System (ADS)

    Curà, Francesca; Mura, Andrea

    2013-11-01

    Tooth stiffness is a very important parameter in studying both static and dynamic behaviour of spline couplings and gears. Many works concerning tooth stiffness calculation are available in the literature, but experimental results are very rare, above all considering spline couplings. In this work experimental values of spline coupling tooth stiffness have been obtained by means of a special hexapod measuring device. Experimental results have been compared with the corresponding theoretical and numerical ones. Also the effect of angular misalignments between hub and shaft has been investigated in the experimental planning.

  4. Quintic nonpolynomial spline solutions for fourth order two-point boundary value problem

    NASA Astrophysics Data System (ADS)

    Ramadan, M. A.; Lashien, I. F.; Zahra, W. K.

    2009-04-01

    In this paper, we develop quintic nonpolynomial spline methods for the numerical solution of fourth order two-point boundary value problems. Using this spline function a few consistency relations are derived for computing approximations to the solution of the problem. The present approach gives better approximations and generalizes all the existing polynomial spline methods up to order four. This approach has less computational cost. Convergence analysis of these methods is discussed. Two numerical examples are included to illustrate the practical usefulness of our methods.

  5. Higher-order numerical solutions using cubic splines. [for partial differential equations

    NASA Technical Reports Server (NTRS)

    Rubin, S. G.; Khosla, P. K.

    1975-01-01

    A cubic spline collocation procedure has recently been developed for the numerical solution of partial differential equations. In the present paper, this spline procedure is reformulated so that the accuracy of the second-derivative approximation is improved and parallels that previously obtained for lower derivative terms. The final result is a numerical procedure having overall third-order accuracy for a non-uniform mesh and overall fourth-order accuracy for a uniform mesh. Solutions using both spline procedures, as well as three-point finite difference methods, will be presented for several model problems.-

  6. Predicting protein concentrations with ELISA microarray assays, monotonic splines and Monte Carlo simulation

    SciTech Connect

    Daly, Don S.; Anderson, Kevin K.; White, Amanda M.; Gonzalez, Rachel M.; Varnum, Susan M.; Zangar, Richard C.

    2008-07-14

    Background: A microarray of enzyme-linked immunosorbent assays, or ELISA microarray, predicts simultaneously the concentrations of numerous proteins in a small sample. These predictions, however, are uncertain due to processing error and biological variability. Making sound biological inferences as well as improving the ELISA microarray process require require both concentration predictions and creditable estimates of their errors. Methods: We present a statistical method based on monotonic spline statistical models, penalized constrained least squares fitting (PCLS) and Monte Carlo simulation (MC) to predict concentrations and estimate prediction errors in ELISA microarray. PCLS restrains the flexible spline to a fit of assay intensity that is a monotone function of protein concentration. With MC, both modeling and measurement errors are combined to estimate prediction error. The spline/PCLS/MC method is compared to a common method using simulated and real ELISA microarray data sets. Results: In contrast to the rigid logistic model, the flexible spline model gave credible fits in almost all test cases including troublesome cases with left and/or right censoring, or other asymmetries. For the real data sets, 61% of the spline predictions were more accurate than their comparable logistic predictions; especially the spline predictions at the extremes of the prediction curve. The relative errors of 50% of comparable spline and logistic predictions differed by less than 20%. Monte Carlo simulation rendered acceptable asymmetric prediction intervals for both spline and logistic models while propagation of error produced symmetric intervals that diverged unrealistically as the standard curves approached horizontal asymptotes. Conclusions: The spline/PCLS/MC method is a flexible, robust alternative to a logistic/NLS/propagation-of-error method to reliably predict protein concentrations and estimate their errors. The spline method simplifies model selection and fitting

  7. Curve fitting and modeling with splines using statistical variable selection techniques

    NASA Technical Reports Server (NTRS)

    Smith, P. L.

    1982-01-01

    The successful application of statistical variable selection techniques to fit splines is demonstrated. Major emphasis is given to knot selection, but order determination is also discussed. Two FORTRAN backward elimination programs, using the B-spline basis, were developed. The program for knot elimination is compared in detail with two other spline-fitting methods and several statistical software packages. An example is also given for the two-variable case using a tensor product basis, with a theoretical discussion of the difficulties of their use.

  8. NCCS Regression Test Harness

    2015-09-09

    The NCCS Regression Test Harness is a software package that provides a framework to perform regression and acceptance testing on NCCS High Performance Computers. The package is written in Python and has only the dependency of a Subversion repository to store the regression tests.

  9. Orthogonal Regression and Equivariance.

    ERIC Educational Resources Information Center

    Blankmeyer, Eric

    Ordinary least-squares regression treats the variables asymmetrically, designating a dependent variable and one or more independent variables. When it is not obvious how to make this distinction, a researcher may prefer to use orthogonal regression, which treats the variables symmetrically. However, the usual procedure for orthogonal regression is…

  10. Unitary Response Regression Models

    ERIC Educational Resources Information Center

    Lipovetsky, S.

    2007-01-01

    The dependent variable in a regular linear regression is a numerical variable, and in a logistic regression it is a binary or categorical variable. In these models the dependent variable has varying values. However, there are problems yielding an identity output of a constant value which can also be modelled in a linear or logistic regression with…

  11. Demosaicing Based on Directional Difference Regression and Efficient Regression Priors.

    PubMed

    Wu, Jiqing; Timofte, Radu; Van Gool, Luc

    2016-08-01

    Color demosaicing is a key image processing step aiming to reconstruct the missing pixels from a recorded raw image. On the one hand, numerous interpolation methods focusing on spatial-spectral correlations have been proved very efficient, whereas they yield a poor image quality and strong visible artifacts. On the other hand, optimization strategies, such as learned simultaneous sparse coding and sparsity and adaptive principal component analysis-based algorithms, were shown to greatly improve image quality compared with that delivered by interpolation methods, but unfortunately are computationally heavy. In this paper, we propose efficient regression priors as a novel, fast post-processing algorithm that learns the regression priors offline from training data. We also propose an independent efficient demosaicing algorithm based on directional difference regression, and introduce its enhanced version based on fused regression. We achieve an image quality comparable to that of the state-of-the-art methods for three benchmarks, while being order(s) of magnitude faster. PMID:27254866

  12. A wavelet Galerkin method employing B-spline bases for solid mechanics problems without the use of a fictitious domain

    NASA Astrophysics Data System (ADS)

    Tanaka, Satoyuki; Okada, Hiroshi; Okazawa, Shigenobu

    2012-07-01

    This study develops a wavelet Galerkin method (WGM) that uses B-spline wavelet bases for application to solid mechanics problems. A fictitious domain is often adopted to treat general boundaries in WGMs. In the analysis, the body is extended to its exterior but very low stiffness is applied to the exterior region. The stiffness matrix in the WGM becomes singular without the use of a fictitious domain. The problem arises from the lack of linear independence of the basis functions. A technique to remove basis functions that can be represented by the superposition of the other basis functions is proposed. The basis functions are automatically eliminated in the pre conditioning step. An adaptive strategy is developed using the proposed technique. The solution is refined by superposing finer wavelet functions. Numerical examples of solid mechanics problems are presented to demonstrate the multiresolution properties of the WGM.

  13. Electromagnetic modelization of spherical focusing on a one-dimensional grating thanks to a conical B-spline modal method.

    PubMed

    Chevalier, Paul; Bouchon, Patrick; Pardo, Fabrice; Haïdar, Riad

    2014-08-01

    Focusing light onto nanostructures thanks to spherical lenses is a first step in enhancing the field and is widely used in applications. Nonetheless, the electromagnetic response of such nanostructures, which have subwavelength patterns, to a focused beam cannot be described by the simple ray tracing formalism. Here, we present a method for computing the response to a focused beam, based on the B-spline modal method adapted to nanostructures in conical mounting. The eigenmodes are computed in each layer for both polarizations and are then combined for the computation of scattering matrices. The simulation of a Gaussian focused beam is obtained thanks to a truncated decomposition into plane waves computed on a single period, which limits the computation burden. PMID:25121523

  14. Quiet Clean Short-haul Experimental Engine (QCSEE). Ball spline pitch change mechanism design report

    NASA Technical Reports Server (NTRS)

    1978-01-01

    Detailed design parameters are presented for a variable-pitch change mechanism. The mechanism is a mechanical system containing a ball screw/spline driving two counteracting master bevel gears meshing pinion gears attached to each of 18 fan blades.

  15. Penalized Spline: a General Robust Trajectory Model for ZIYUAN-3 Satellite

    NASA Astrophysics Data System (ADS)

    Pan, H.; Zou, Z.

    2016-06-01

    Owing to the dynamic imaging system, the trajectory model plays a very important role in the geometric processing of high resolution satellite imagery. However, establishing a trajectory model is difficult when only discrete and noisy data are available. In this manuscript, we proposed a general robust trajectory model, the penalized spline model, which could fit trajectory data well and smooth noise. The penalized parameter λ controlling the smooth and fitting accuracy could be estimated by generalized cross-validation. Five other trajectory models, including third-order polynomials, Chebyshev polynomials, linear interpolation, Lagrange interpolation and cubic spline, are compared with the penalized spline model. Both the sophisticated ephemeris and on-board ephemeris are used to compare the orbit models. The penalized spline model could smooth part of noise, and accuracy would decrease as the orbit length increases. The band-to-band misregistration of ZiYuan-3 Dengfeng and Faizabad multispectral images is used to evaluate the proposed method. With the Dengfeng dataset, the third-order polynomials and Chebyshev approximation could not model the oscillation, and introduce misregistration of 0.57 pixels misregistration in across-track direction and 0.33 pixels in along-track direction. With the Faizabad dataset, the linear interpolation, Lagrange interpolation and cubic spline model suffer from noise, introducing larger misregistration than the approximation models. Experimental results suggest the penalized spline model could model the oscillation and smooth noise.

  16. Registration of sliding objects using direction dependent B-splines decomposition

    NASA Astrophysics Data System (ADS)

    Delmon, V.; Rit, S.; Pinho, R.; Sarrut, D.

    2013-03-01

    Sliding motion is a challenge for deformable image registration because it leads to discontinuities in the sought deformation. In this paper, we present a method to handle sliding motion using multiple B-spline transforms. The proposed method decomposes the sought deformation into sliding regions to allow discontinuities at their interfaces, but prevents unrealistic solutions by forcing those interfaces to match. The method was evaluated on 16 lung cancer patients against a single B-spline transform approach and a multi B-spline transforms approach without the sliding constraint at the interface. The target registration error (TRE) was significantly lower with the proposed method (TRE = 1.5 mm) than with the single B-spline approach (TRE = 3.7 mm) and was comparable to the multi B-spline approach without the sliding constraint (TRE = 1.4 mm). The proposed method was also more accurate along region interfaces, with 37% less gaps and overlaps when compared to the multi B-spline transforms without the sliding constraint. This work was presented in part at the 4th International Workshop on Pulmonary Image Analysis during the Medical Image Computing and Computer Assisted Intervention (MICCAI) in Toronto, Canada (2011).

  17. Exact sampling of the unobserved covariates in Bayesian spline models for measurement error problems

    PubMed Central

    Carroll, Raymond J.

    2015-01-01

    In truncated polynomial spline or B-spline models where the covariates are measured with error, a fully Bayesian approach to model fitting requires the covariates and model parameters to be sampled at every Markov chain Monte Carlo iteration. Sampling the unobserved covariates poses a major computational problem and usually Gibbs sampling is not possible. This forces the practitioner to use a Metropolis–Hastings step which might suffer from unacceptable performance due to poor mixing and might require careful tuning. In this article we show for the cases of truncated polynomial spline or B-spline models of degree equal to one, the complete conditional distribution of the covariates measured with error is available explicitly as a mixture of double-truncated normals, thereby enabling a Gibbs sampling scheme. We demonstrate via a simulation study that our technique performs favorably in terms of computational efficiency and statistical performance. Our results indicate up to 62 and 54 % increase in mean integrated squared error efficiency when compared to existing alternatives while using truncated polynomial splines and B-splines respectively. Furthermore, there is evidence that the gain in efficiency increases with the measurement error variance, indicating the proposed method is a particularly valuable tool for challenging applications that present high measurement error. We conclude with a demonstration on a nutritional epidemiology data set from the NIH-AARP study and by pointing out some possible extensions of the current work. PMID:27418743

  18. Penalized solutions to functional regression problems

    PubMed Central

    Harezlak, Jaroslaw; Coull, Brent A.; Laird, Nan M.; Magari, Shannon R.; Christiani, David C.

    2007-01-01

    SUMMARY Recent technological advances in continuous biological monitoring and personal exposure assessment have led to the collection of subject-specific functional data. A primary goal in such studies is to assess the relationship between the functional predictors and the functional responses. The historical functional linear model (HFLM) can be used to model such dependencies of the response on the history of the predictor values. An estimation procedure for the regression coefficients that uses a variety of regularization techniques is proposed. An approximation of the regression surface relating the predictor to the outcome by a finite-dimensional basis expansion is used, followed by penalization of the coefficients of the neighboring basis functions by restricting the size of the coefficient differences to be small. Penalties based on the absolute values of the basis function coefficient differences (corresponding to the LASSO) and the squares of these differences (corresponding to the penalized spline methodology) are studied. The fits are compared using an extension of the Akaike Information Criterion that combines the error variance estimate, degrees of freedom of the fit and the norm of the bases function coefficients. The performance of the proposed methods is evaluated via simulations. The LASSO penalty applied to the linearly transformed coefficients yields sparser representations of the estimated regression surface, while the quadratic penalty provides solutions with the smallest L2-norm of the basis functions coefficients. Finally, the new estimation procedure is applied to the analysis of the effects of occupational particulate matter (PM) exposure on the heart rate variability (HRV) in a cohort of boilermaker workers. Results suggest that the strongest association between PM exposure and HRV in these workers occurs as a result of point exposures to the increased levels of particulate matter corresponding to smoking breaks. PMID:18552972

  19. Penalized solutions to functional regression problems.

    PubMed

    Harezlak, Jaroslaw; Coull, Brent A; Laird, Nan M; Magari, Shannon R; Christiani, David C

    2007-06-15

    Recent technological advances in continuous biological monitoring and personal exposure assessment have led to the collection of subject-specific functional data. A primary goal in such studies is to assess the relationship between the functional predictors and the functional responses. The historical functional linear model (HFLM) can be used to model such dependencies of the response on the history of the predictor values. An estimation procedure for the regression coefficients that uses a variety of regularization techniques is proposed. An approximation of the regression surface relating the predictor to the outcome by a finite-dimensional basis expansion is used, followed by penalization of the coefficients of the neighboring basis functions by restricting the size of the coefficient differences to be small. Penalties based on the absolute values of the basis function coefficient differences (corresponding to the LASSO) and the squares of these differences (corresponding to the penalized spline methodology) are studied. The fits are compared using an extension of the Akaike Information Criterion that combines the error variance estimate, degrees of freedom of the fit and the norm of the bases function coefficients. The performance of the proposed methods is evaluated via simulations. The LASSO penalty applied to the linearly transformed coefficients yields sparser representations of the estimated regression surface, while the quadratic penalty provides solutions with the smallest L(2)-norm of the basis functions coefficients. Finally, the new estimation procedure is applied to the analysis of the effects of occupational particulate matter (PM) exposure on the heart rate variability (HRV) in a cohort of boilermaker workers. Results suggest that the strongest association between PM exposure and HRV in these workers occurs as a result of point exposures to the increased levels of particulate matter corresponding to smoking breaks. PMID:18552972

  20. Regression Discontinuity Design: Simulation and Application in Two Cardiovascular Trials with Continuous Outcomes.

    PubMed

    van Leeuwen, Nikki; Lingsma, Hester F; de Craen, Anton J M; Nieboer, Daan; Mooijaart, Simon P; Richard, Edo; Steyerberg, Ewout W

    2016-07-01

    In epidemiology, the regression discontinuity design has received increasing attention recently and might be an alternative to randomized controlled trials (RCTs) to evaluate treatment effects. In regression discontinuity, treatment is assigned above a certain threshold of an assignment variable for which the treatment effect is adjusted in the analysis. We performed simulations and a validation study in which we used treatment effect estimates from an RCT as the reference for a prospectively performed regression discontinuity study. We estimated the treatment effect using linear regression adjusting for the assignment variable both as linear terms and restricted cubic spline and using local linear regression models. In the first validation study, the estimated treatment effect from a cardiovascular RCT was -4.0 mmHg blood pressure (95% confidence interval: -5.4, -2.6) at 2 years after inclusion. The estimated effect in regression discontinuity was -5.9 mmHg (95% confidence interval: -10.8, -1.0) with restricted cubic spline adjustment. Regression discontinuity showed different, local effects when analyzed with local linear regression. In the second RCT, regression discontinuity treatment effect estimates on total cholesterol level at 3 months after inclusion were similar to RCT estimates, but at least six times less precise. In conclusion, regression discontinuity may provide similar estimates of treatment effects to RCT estimates, but requires the assumption of a global treatment effect over the range of the assignment variable. In addition to a risk of bias due to wrong assumptions, researchers need to weigh better recruitment against the substantial loss in precision when considering a study with regression discontinuity versus RCT design. PMID:27031038

  1. Prediction in Multiple Regression.

    ERIC Educational Resources Information Center

    Osborne, Jason W.

    2000-01-01

    Presents the concept of prediction via multiple regression (MR) and discusses the assumptions underlying multiple regression analyses. Also discusses shrinkage, cross-validation, and double cross-validation of prediction equations and describes how to calculate confidence intervals around individual predictions. (SLD)

  2. Improved Regression Calibration

    ERIC Educational Resources Information Center

    Skrondal, Anders; Kuha, Jouni

    2012-01-01

    The likelihood for generalized linear models with covariate measurement error cannot in general be expressed in closed form, which makes maximum likelihood estimation taxing. A popular alternative is regression calibration which is computationally efficient at the cost of inconsistent estimation. We propose an improved regression calibration…

  3. Morse-Smale Regression

    PubMed Central

    Gerber, Samuel; Rübel, Oliver; Bremer, Peer-Timo; Pascucci, Valerio; Whitaker, Ross T.

    2012-01-01

    This paper introduces a novel partition-based regression approach that incorporates topological information. Partition-based regression typically introduce a quality-of-fit-driven decomposition of the domain. The emphasis in this work is on a topologically meaningful segmentation. Thus, the proposed regression approach is based on a segmentation induced by a discrete approximation of the Morse-Smale complex. This yields a segmentation with partitions corresponding to regions of the function with a single minimum and maximum that are often well approximated by a linear model. This approach yields regression models that are amenable to interpretation and have good predictive capacity. Typically, regression estimates are quantified by their geometrical accuracy. For the proposed regression, an important aspect is the quality of the segmentation itself. Thus, this paper introduces a new criterion that measures the topological accuracy of the estimate. The topological accuracy provides a complementary measure to the classical geometrical error measures and is very sensitive to over-fitting. The Morse-Smale regression is compared to state-of-the-art approaches in terms of geometry and topology and yields comparable or improved fits in many cases. Finally, a detailed study on climate-simulation data demonstrates the application of the Morse-Smale regression. Supplementary materials are available online and contain an implementation of the proposed approach in the R package msr, an analysis and simulations on the stability of the Morse-Smale complex approximation and additional tables for the climate-simulation study. PMID:23687424

  4. Morse–Smale Regression

    SciTech Connect

    Gerber, Samuel; Rubel, Oliver; Bremer, Peer -Timo; Pascucci, Valerio; Whitaker, Ross T.

    2012-01-19

    This paper introduces a novel partition-based regression approach that incorporates topological information. Partition-based regression typically introduces a quality-of-fit-driven decomposition of the domain. The emphasis in this work is on a topologically meaningful segmentation. Thus, the proposed regression approach is based on a segmentation induced by a discrete approximation of the Morse–Smale complex. This yields a segmentation with partitions corresponding to regions of the function with a single minimum and maximum that are often well approximated by a linear model. This approach yields regression models that are amenable to interpretation and have good predictive capacity. Typically, regression estimates are quantified by their geometrical accuracy. For the proposed regression, an important aspect is the quality of the segmentation itself. Thus, this article introduces a new criterion that measures the topological accuracy of the estimate. The topological accuracy provides a complementary measure to the classical geometrical error measures and is very sensitive to overfitting. The Morse–Smale regression is compared to state-of-the-art approaches in terms of geometry and topology and yields comparable or improved fits in many cases. Finally, a detailed study on climate-simulation data demonstrates the application of the Morse–Smale regression. Supplementary Materials are available online and contain an implementation of the proposed approach in the R package msr, an analysis and simulations on the stability of the Morse–Smale complex approximation, and additional tables for the climate-simulation study.

  5. The use of Bayesian nonlinear regression techniques for the modelling of the retention behaviour of volatile components of Artemisia species.

    PubMed

    Jalali-Heravi, M; Mani-Varnosfaderani, A; Taherinia, D; Mahmoodi, M M

    2012-07-01

    The main aim of this work was to assess the ability of Bayesian multivariate adaptive regression splines (BMARS) and Bayesian radial basis function (BRBF) techniques for modelling the gas chromatographic retention indices of volatile components of Artemisia species. A diverse set of molecular descriptors was calculated and used as descriptor pool for modelling the retention indices. The ability of BMARS and BRBF techniques was explored for the selection of the most relevant descriptors and proper basis functions for modelling. The results revealed that BRBF technique is more reproducible than BMARS for modelling the retention indices and can be used as a method for variable selection and modelling in quantitative structure-property relationship (QSPR) studies. It is also concluded that the Markov chain Monte Carlo (MCMC) search engine, implemented in BRBF algorithm, is a suitable method for selecting the most important features from a vast number of them. The values of correlation between the calculated retention indices and the experimental ones for the training and prediction sets (0.935 and 0.902, respectively) revealed the prediction power of the BRBF model in estimating the retention index of volatile components of Artemisia species. PMID:22452344

  6. Evaluation of the spline reconstruction technique for PET

    SciTech Connect

    Kastis, George A. Kyriakopoulou, Dimitra; Gaitanis, Anastasios; Fernández, Yolanda; Hutton, Brian F.; Fokas, Athanasios S.

    2014-04-15

    Purpose: The spline reconstruction technique (SRT), based on the analytic formula for the inverse Radon transform, has been presented earlier in the literature. In this study, the authors present an improved formulation and numerical implementation of this algorithm and evaluate it in comparison to filtered backprojection (FBP). Methods: The SRT is based on the numerical evaluation of the Hilbert transform of the sinogram via an approximation in terms of “custom made” cubic splines. By restricting reconstruction only within object pixels and by utilizing certain mathematical symmetries, the authors achieve a reconstruction time comparable to that of FBP. The authors have implemented SRT in STIR and have evaluated this technique using simulated data from a clinical positron emission tomography (PET) system, as well as real data obtained from clinical and preclinical PET scanners. For the simulation studies, the authors have simulated sinograms of a point-source and three digital phantoms. Using these sinograms, the authors have created realizations of Poisson noise at five noise levels. In addition to visual comparisons of the reconstructed images, the authors have determined contrast and bias for different regions of the phantoms as a function of noise level. For the real-data studies, sinograms of an{sup 18}F-FDG injected mouse, a NEMA NU 4-2008 image quality phantom, and a Derenzo phantom have been acquired from a commercial PET system. The authors have determined: (a) coefficient of variations (COV) and contrast from the NEMA phantom, (b) contrast for the various sections of the Derenzo phantom, and (c) line profiles for the Derenzo phantom. Furthermore, the authors have acquired sinograms from a whole-body PET scan of an {sup 18}F-FDG injected cancer patient, using the GE Discovery ST PET/CT system. SRT and FBP reconstructions of the thorax have been visually evaluated. Results: The results indicate an improvement in FWHM and FWTM in both simulated and real

  7. Boosted Beta Regression

    PubMed Central

    Schmid, Matthias; Wickler, Florian; Maloney, Kelly O.; Mitchell, Richard; Fenske, Nora; Mayr, Andreas

    2013-01-01

    Regression analysis with a bounded outcome is a common problem in applied statistics. Typical examples include regression models for percentage outcomes and the analysis of ratings that are measured on a bounded scale. In this paper, we consider beta regression, which is a generalization of logit models to situations where the response is continuous on the interval (0,1). Consequently, beta regression is a convenient tool for analyzing percentage responses. The classical approach to fit a beta regression model is to use maximum likelihood estimation with subsequent AIC-based variable selection. As an alternative to this established - yet unstable - approach, we propose a new estimation technique called boosted beta regression. With boosted beta regression estimation and variable selection can be carried out simultaneously in a highly efficient way. Additionally, both the mean and the variance of a percentage response can be modeled using flexible nonlinear covariate effects. As a consequence, the new method accounts for common problems such as overdispersion and non-binomial variance structures. PMID:23626706

  8. An evaluation of prefiltered B-spline reconstruction for quasi-interpolation on the Body-Centered Cubic lattice.

    PubMed

    Csébfalvi, Balázs

    2010-01-01

    In this paper, we demonstrate that quasi-interpolation of orders two and four can be efficiently implemented on the Body-Centered Cubic (BCC) lattice by using tensor-product B-splines combined with appropriate discrete prefilters. Unlike the nonseparable box-spline reconstruction previously proposed for the BCC lattice, the prefiltered B-spline reconstruction can utilize the fast trilinear texture-fetching capability of the recent graphics cards. Therefore, it can be applied for rendering BCC-sampled volumetric data interactively. Furthermore, we show that a separable B-spline filter can suppress the postaliasing effect much more isotropically than a nonseparable box-spline filter of the same approximation power. Although prefilters that make the B-splines interpolating on the BCC lattice do not exist, we demonstrate that quasi-interpolating prefiltered linear and cubic B-spline reconstructions can still provide similar or higher image quality than the interpolating linear box-spline and prefiltered quintic box-spline reconstructions, respectively. PMID:20224143

  9. Revisiting Regression in Autism: Heller's "Dementia Infantilis"

    ERIC Educational Resources Information Center

    Westphal, Alexander; Schelinski, Stefanie; Volkmar, Fred; Pelphrey, Kevin

    2013-01-01

    Theodor Heller first described a severe regression of adaptive function in normally developing children, something he termed dementia infantilis, over one 100 years ago. Dementia infantilis is most closely related to the modern diagnosis, childhood disintegrative disorder. We translate Heller's paper, Uber Dementia Infantilis, and discuss…

  10. Gearbox Reliability Collaborative Analytic Formulation for the Evaluation of Spline Couplings

    SciTech Connect

    Guo, Y.; Keller, J.; Errichello, R.; Halse, C.

    2013-12-01

    Gearboxes in wind turbines have not been achieving their expected design life; however, they commonly meet and exceed the design criteria specified in current standards in the gear, bearing, and wind turbine industry as well as third-party certification criteria. The cost of gearbox replacements and rebuilds, as well as the down time associated with these failures, has elevated the cost of wind energy. The National Renewable Energy Laboratory (NREL) Gearbox Reliability Collaborative (GRC) was established by the U.S. Department of Energy in 2006; its key goal is to understand the root causes of premature gearbox failures and improve their reliability using a combined approach of dynamometer testing, field testing, and modeling. As part of the GRC program, this paper investigates the design of the spline coupling often used in modern wind turbine gearboxes to connect the planetary and helical gear stages. Aside from transmitting the driving torque, another common function of the spline coupling is to allow the sun to float between the planets. The amount the sun can float is determined by the spline design and the sun shaft flexibility subject to the operational loads. Current standards address spline coupling design requirements in varying detail. This report provides additional insight beyond these current standards to quickly evaluate spline coupling designs.

  11. George: Gaussian Process regression

    NASA Astrophysics Data System (ADS)

    Foreman-Mackey, Daniel

    2015-11-01

    George is a fast and flexible library, implemented in C++ with Python bindings, for Gaussian Process regression useful for accounting for correlated noise in astronomical datasets, including those for transiting exoplanet discovery and characterization and stellar population modeling.

  12. Multivariate Regression with Calibration*

    PubMed Central

    Liu, Han; Wang, Lie; Zhao, Tuo

    2014-01-01

    We propose a new method named calibrated multivariate regression (CMR) for fitting high dimensional multivariate regression models. Compared to existing methods, CMR calibrates the regularization for each regression task with respect to its noise level so that it is simultaneously tuning insensitive and achieves an improved finite-sample performance. Computationally, we develop an efficient smoothed proximal gradient algorithm which has a worst-case iteration complexity O(1/ε), where ε is a pre-specified numerical accuracy. Theoretically, we prove that CMR achieves the optimal rate of convergence in parameter estimation. We illustrate the usefulness of CMR by thorough numerical simulations and show that CMR consistently outperforms other high dimensional multivariate regression methods. We also apply CMR on a brain activity prediction problem and find that CMR is as competitive as the handcrafted model created by human experts. PMID:25620861

  13. BSR: B-spline atomic R-matrix codes

    NASA Astrophysics Data System (ADS)

    Zatsarinny, Oleg

    2006-02-01

    BSR is a general program to calculate atomic continuum processes using the B-spline R-matrix method, including electron-atom and electron-ion scattering, and radiative processes such as bound-bound transitions, photoionization and polarizabilities. The calculations can be performed in LS-coupling or in an intermediate-coupling scheme by including terms of the Breit-Pauli Hamiltonian. New version program summaryTitle of program: BSR Catalogue identifier: ADWY Program summary URL:http://cpc.cs.qub.ac.uk/summaries/ADWY Program obtainable from: CPC Program Library, Queen's University of Belfast, N. Ireland Computers on which the program has been tested: Microway Beowulf cluster; Compaq Beowulf cluster; DEC Alpha workstation; DELL PC Operating systems under which the new version has been tested: UNIX, Windows XP Programming language used: FORTRAN 95 Memory required to execute with typical data: Typically 256-512 Mwords. Since all the principal dimensions are allocatable, the available memory defines the maximum complexity of the problem No. of bits in a word: 8 No. of processors used: 1 Has the code been vectorized or parallelized?: no No. of lines in distributed program, including test data, etc.: 69 943 No. of bytes in distributed program, including test data, etc.: 746 450 Peripherals used: scratch disk store; permanent disk store Distribution format: tar.gz Nature of physical problem: This program uses the R-matrix method to calculate electron-atom and electron-ion collision processes, with options to calculate radiative data, photoionization, etc. The calculations can be performed in LS-coupling or in an intermediate-coupling scheme, with options to include Breit-Pauli terms in the Hamiltonian. Method of solution: The R-matrix method is used [P.G. Burke, K.A. Berrington, Atomic and Molecular Processes: An R-Matrix Approach, IOP Publishing, Bristol, 1993; P.G. Burke, W.D. Robb, Adv. At. Mol. Phys. 11 (1975) 143; K.A. Berrington, W.B. Eissner, P.H. Norrington, Comput

  14. B-spline active rays segmentation of microcalcifications in mammography

    SciTech Connect

    Arikidis, Nikolaos S.; Skiadopoulos, Spyros; Karahaliou, Anna; Likaki, Eleni; Panayiotakis, George; Costaridou, Lena

    2008-11-15

    Accurate segmentation of microcalcifications in mammography is crucial for the quantification of morphologic properties by features incorporated in computer-aided diagnosis schemes. A novel segmentation method is proposed implementing active rays (polar-transformed active contours) on B-spline wavelet representation to identify microcalcification contour point estimates in a coarse-to-fine strategy at two levels of analysis. An iterative region growing method is used to delineate the final microcalcification contour curve, with pixel aggregation constrained by the microcalcification contour point estimates. A radial gradient-based method was also implemented for comparative purposes. The methods were tested on a dataset consisting of 149 mainly pleomorphic microcalcification clusters originating from 130 mammograms of the DDSM database. Segmentation accuracy of both methods was evaluated by three radiologists, based on a five-point rating scale. The radiologists' average accuracy ratings were 3.96{+-}0.77, 3.97{+-}0.80, and 3.83{+-}0.89 for the proposed method, and 2.91{+-}0.86, 2.10{+-}0.94, and 2.56{+-}0.76 for the radial gradient-based method, respectively, while the differences in accuracy ratings between the two segmentation methods were statistically significant (Wilcoxon signed-ranks test, p<0.05). The effect of the two segmentation methods in the classification of benign from malignant microcalcification clusters was also investigated. A least square minimum distance classifier was employed based on cluster features reflecting three morphological properties of individual microcalcifications (area, length, and relative contrast). Classification performance was evaluated by means of the area under ROC curve (A{sub z}). The area and length morphologic features demonstrated a statistically significant (Mann-Whitney U-test, p<0.05) higher patient-based classification performance when extracted from microcalcifications segmented by the proposed method (0

  15. Penalized splines for smooth representation of high-dimensional Monte Carlo datasets

    NASA Astrophysics Data System (ADS)

    Whitehorn, Nathan; van Santen, Jakob; Lafebre, Sven

    2013-09-01

    Detector response to a high-energy physics process is often estimated by Monte Carlo simulation. For purposes of data analysis, the results of this simulation are typically stored in large multi-dimensional histograms, which can quickly become both too large to easily store and manipulate and numerically problematic due to unfilled bins or interpolation artifacts. We describe here an application of the penalized spline technique (Marx and Eilers, 1996) [1] to efficiently compute B-spline representations of such tables and discuss aspects of the resulting B-spline fits that simplify many common tasks in handling tabulated Monte Carlo data in high-energy physics analysis, in particular their use in maximum-likelihood fitting.

  16. Towards a More General Type of Univariate Constrained Interpolation with Fractal Splines

    NASA Astrophysics Data System (ADS)

    Chand, A. K. B.; Viswanathan, P.; Reddy, K. M.

    2015-09-01

    Recently, in [Electron. Trans. Numer. Anal. 41 (2014) 420-442] authors introduced a new class of rational cubic fractal interpolation functions with linear denominators via fractal perturbation of traditional nonrecursive rational cubic splines and investigated their basic shape preserving properties. The main goal of the current paper is to embark on univariate constrained fractal interpolation that is more general than what was considered so far. To this end, we propose some strategies for selecting the parameters of the rational fractal spline so that the interpolating curves lie strictly above or below a prescribed linear or a quadratic spline function. Approximation property of the proposed rational cubic fractal spine is broached by using the Peano kernel theorem as an interlude. The paper also provides an illustration of background theory, veined by examples.

  17. Reducing memory demands of splined orbitals in diffusion Monte Carlo calculations

    NASA Astrophysics Data System (ADS)

    Krogel, Jaron; Reboredo, Fernando

    Quantum Monte Carlo calculations of defect properties of transition metal oxides have become feasible in recent years due to increases in computing power. As the system size has grown, availability of on-node memory has become a limiting factor. The main growth in memory demand stems from the B-spline representation of the single particle orbitals, especially for heavier elements such as transition metals where semi-core states are present. Despite the associated memory costs, splines are computationally efficient. In this work, we explore alternatives to reduce the memory usage of splined orbitals without significantly affecting numerical fidelity or computational efficiency. For the example case of bulk MnO we have currently achieved a memory savings of 50% while only increasing the overall computational cost of the simulation by 15%. This work is supported by the Materials Sciences & Engineering Division of the Office of Basic Energy Sciences, U.S. Department of Energy (DOE).

  18. Error Estimates Derived from the Data for Least-Squares Spline Fitting

    SciTech Connect

    Jerome Blair

    2007-06-25

    The use of least-squares fitting by cubic splines for the purpose of noise reduction in measured data is studied. Splines with variable mesh size are considered. The error, the difference between the input signal and its estimate, is divided into two sources: the R-error, which depends only on the noise and increases with decreasing mesh size, and the Ferror, which depends only on the signal and decreases with decreasing mesh size. The estimation of both errors as a function of time is demonstrated. The R-error estimation requires knowledge of the statistics of the noise and uses well-known methods. The primary contribution of the paper is a method for estimating the F-error that requires no prior knowledge of the signal except that it has four derivatives. It is calculated from the difference between two different spline fits to the data and is illustrated with Monte Carlo simulations and with an example.

  19. Modeling of complex-valued wiener systems using B-spline neural network.

    PubMed

    Hong, Xia; Chen, Sheng

    2011-05-01

    In this brief, a new complex-valued B-spline neural network is introduced in order to model the complex-valued Wiener system using observational input/output data. The complex-valued nonlinear static function in the Wiener system is represented using the tensor product from two univariate B-spline neural networks, using the real and imaginary parts of the system input. Following the use of a simple least squares parameter initialization scheme, the Gauss-Newton algorithm is applied for the parameter estimation, which incorporates the De Boor algorithm, including both the B-spline curve and the first-order derivatives recursion. Numerical examples, including a nonlinear high-power amplifier model in communication systems, are used to demonstrate the efficacy of the proposed approaches. PMID:21550875

  20. Regression versus No Regression in the Autistic Disorder: Developmental Trajectories

    ERIC Educational Resources Information Center

    Bernabei, P.; Cerquiglini, A.; Cortesi, F.; D' Ardia, C.

    2007-01-01

    Developmental regression is a complex phenomenon which occurs in 20-49% of the autistic population. Aim of the study was to assess possible differences in the development of regressed and non-regressed autistic preschoolers. We longitudinally studied 40 autistic children (18 regressed, 22 non-regressed) aged 2-6 years. The following developmental…

  1. Inference in dynamic systems using B-splines and quasilinearized ODE penalties.

    PubMed

    Frasso, Gianluca; Jaeger, Jonathan; Lambert, Philippe

    2016-05-01

    Nonlinear (systems of) ordinary differential equations (ODEs) are common tools in the analysis of complex one-dimensional dynamic systems. We propose a smoothing approach regularized by a quasilinearized ODE-based penalty. Within the quasilinearized spline-based framework, the estimation reduces to a conditionally linear problem for the optimization of the spline coefficients. Furthermore, standard ODE compliance parameter(s) selection criteria are applicable. We evaluate the performances of the proposed strategy through simulated and real data examples. Simulation studies suggest that the proposed procedure ensures more accurate estimates than standard nonlinear least squares approaches when the state (initial and/or boundary) conditions are not known. PMID:26602190

  2. Preconditioning cubic spline collocation method by FEM and FDM for elliptic equations

    SciTech Connect

    Kim, Sang Dong

    1996-12-31

    In this talk we discuss the finite element and finite difference technique for the cubic spline collocation method. For this purpose, we consider the uniformly elliptic operator A defined by Au := -{Delta}u + a{sub 1}u{sub x} + a{sub 2}u{sub y} + a{sub 0}u in {Omega} (the unit square) with Dirichlet or Neumann boundary conditions and its discretization based on Hermite cubic spline spaces and collocation at the Gauss points. Using an interpolatory basis with support on the Gauss points one obtains the matrix A{sub N} (h = 1/N).

  3. Trigonometric quadratic B-spline subdomain Galerkin algorithm for the Burgers' equation

    NASA Astrophysics Data System (ADS)

    Ay, Buket; Dag, Idris; Gorgulu, Melis Zorsahin

    2015-12-01

    A variant of the subdomain Galerkin method has been set up to find numerical solutions of the Burgers' equation. Approximate function consists of the combination of the trigonometric B-splines. Integration of Burgers' equation has been achived by aid of the subdomain Galerkin method based on the trigonometric B-splines as an approximate functions. The resulting first order ordinary differential system has been converted into an iterative algebraic equation by use of the Crank-Nicolson method at successive two time levels. The suggested algorithm is tested on somewell-known problems for the Burgers' equation.

  4. Development of a novel adaptive model to represent global ionosphere information from combining space geodetic measurement systems

    NASA Astrophysics Data System (ADS)

    Erdogan, Eren; Durmaz, Murat; Liang, Wenjing; Kappelsberger, Maria; Dettmering, Denise; Limberger, Marco; Schmidt, Michael; Seitz, Florian

    2015-04-01

    This project focuses on the development of a novel near real-time data adaptive filtering framework for global modeling of the vertical total electron content (VTEC). Ionospheric data can be acquired from various space geodetic observation techniques such as GNSS, altimetry, DORIS and radio occultation. The project aims to model the temporal and spatial variations of the ionosphere by a combination of these techniques in an adaptive data assimilation framework, which utilizes appropriate basis functions to represent the VTEC. The measurements naturally have inhomogeneous data distribution both in time and space. Therefore, integrating the aforementioned observation techniques into data adaptive basis selection methods (e.g. Multivariate Adaptive Regression B-Splines) with recursive filtering (e.g. Kalman filtering) to model the daily global ionosphere may deliver important improvements over classical estimation methods. Since ionospheric inverse problems are ill-posed, a suitable regularization procedure might stabilize the solution. In this contribution we present first results related to the selected evaluation procedure. Comparisons made with respect to applicability, efficiency, accuracy, and numerical efforts.

  5. Practical Session: Logistic Regression

    NASA Astrophysics Data System (ADS)

    Clausel, M.; Grégoire, G.

    2014-12-01

    An exercise is proposed to illustrate the logistic regression. One investigates the different risk factors in the apparition of coronary heart disease. It has been proposed in Chapter 5 of the book of D.G. Kleinbaum and M. Klein, "Logistic Regression", Statistics for Biology and Health, Springer Science Business Media, LLC (2010) and also by D. Chessel and A.B. Dufour in Lyon 1 (see Sect. 6 of http://pbil.univ-lyon1.fr/R/pdf/tdr341.pdf). This example is based on data given in the file evans.txt coming from http://www.sph.emory.edu/dkleinb/logreg3.htm#data.

  6. Explorations in Statistics: Regression

    ERIC Educational Resources Information Center

    Curran-Everett, Douglas

    2011-01-01

    Learning about statistics is a lot like learning about science: the learning is more meaningful if you can actively explore. This seventh installment of "Explorations in Statistics" explores regression, a technique that estimates the nature of the relationship between two things for which we may only surmise a mechanistic or predictive connection.…

  7. Modern Regression Discontinuity Analysis

    ERIC Educational Resources Information Center

    Bloom, Howard S.

    2012-01-01

    This article provides a detailed discussion of the theory and practice of modern regression discontinuity (RD) analysis for estimating the effects of interventions or treatments. Part 1 briefly chronicles the history of RD analysis and summarizes its past applications. Part 2 explains how in theory an RD analysis can identify an average effect of…

  8. CORRELATION AND REGRESSION

    EPA Science Inventory

    Webcast entitled Statistical Tools for Making Sense of Data, by the National Nutrient Criteria Support Center, N-STEPS (Nutrients-Scientific Technical Exchange Partnership. The section "Correlation and Regression" provides an overview of these two techniques in the context of nut...

  9. Multiple linear regression analysis

    NASA Technical Reports Server (NTRS)

    Edwards, T. R.

    1980-01-01

    Program rapidly selects best-suited set of coefficients. User supplies only vectors of independent and dependent data and specifies confidence level required. Program uses stepwise statistical procedure for relating minimal set of variables to set of observations; final regression contains only most statistically significant coefficients. Program is written in FORTRAN IV for batch execution and has been implemented on NOVA 1200.

  10. Partial covariate adjusted regression

    PubMed Central

    Şentürk, Damla; Nguyen, Danh V.

    2008-01-01

    Covariate adjusted regression (CAR) is a recently proposed adjustment method for regression analysis where both the response and predictors are not directly observed (Şentürk and Müller, 2005). The available data has been distorted by unknown functions of an observable confounding covariate. CAR provides consistent estimators for the coefficients of the regression between the variables of interest, adjusted for the confounder. We develop a broader class of partial covariate adjusted regression (PCAR) models to accommodate both distorted and undistorted (adjusted/unadjusted) predictors. The PCAR model allows for unadjusted predictors, such as age, gender and demographic variables, which are common in the analysis of biomedical and epidemiological data. The available estimation and inference procedures for CAR are shown to be invalid for the proposed PCAR model. We propose new estimators and develop new inference tools for the more general PCAR setting. In particular, we establish the asymptotic normality of the proposed estimators and propose consistent estimators of their asymptotic variances. Finite sample properties of the proposed estimators are investigated using simulation studies and the method is also illustrated with a Pima Indians diabetes data set. PMID:20126296

  11. Mechanisms of neuroblastoma regression

    PubMed Central

    Brodeur, Garrett M.; Bagatell, Rochelle

    2014-01-01

    Recent genomic and biological studies of neuroblastoma have shed light on the dramatic heterogeneity in the clinical behaviour of this disease, which spans from spontaneous regression or differentiation in some patients, to relentless disease progression in others, despite intensive multimodality therapy. This evidence also suggests several possible mechanisms to explain the phenomena of spontaneous regression in neuroblastomas, including neurotrophin deprivation, humoral or cellular immunity, loss of telomerase activity and alterations in epigenetic regulation. A better understanding of the mechanisms of spontaneous regression might help to identify optimal therapeutic approaches for patients with these tumours. Currently, the most druggable mechanism is the delayed activation of developmentally programmed cell death regulated by the tropomyosin receptor kinase A pathway. Indeed, targeted therapy aimed at inhibiting neurotrophin receptors might be used in lieu of conventional chemotherapy or radiation in infants with biologically favourable tumours that require treatment. Alternative approaches consist of breaking immune tolerance to tumour antigens or activating neurotrophin receptor pathways to induce neuronal differentiation. These approaches are likely to be most effective against biologically favourable tumours, but they might also provide insights into treatment of biologically unfavourable tumours. We describe the different mechanisms of spontaneous neuroblastoma regression and the consequent therapeutic approaches. PMID:25331179

  12. Bayesian ARTMAP for regression.

    PubMed

    Sasu, L M; Andonie, R

    2013-10-01

    Bayesian ARTMAP (BA) is a recently introduced neural architecture which uses a combination of Fuzzy ARTMAP competitive learning and Bayesian learning. Training is generally performed online, in a single-epoch. During training, BA creates input data clusters as Gaussian categories, and also infers the conditional probabilities between input patterns and categories, and between categories and classes. During prediction, BA uses Bayesian posterior probability estimation. So far, BA was used only for classification. The goal of this paper is to analyze the efficiency of BA for regression problems. Our contributions are: (i) we generalize the BA algorithm using the clustering functionality of both ART modules, and name it BA for Regression (BAR); (ii) we prove that BAR is a universal approximator with the best approximation property. In other words, BAR approximates arbitrarily well any continuous function (universal approximation) and, for every given continuous function, there is one in the set of BAR approximators situated at minimum distance (best approximation); (iii) we experimentally compare the online trained BAR with several neural models, on the following standard regression benchmarks: CPU Computer Hardware, Boston Housing, Wisconsin Breast Cancer, and Communities and Crime. Our results show that BAR is an appropriate tool for regression tasks, both for theoretical and practical reasons. PMID:23665468

  13. A Unified Representation Scheme for Solid Geometric Objects Using B-splines (extended Abstract)

    NASA Technical Reports Server (NTRS)

    Bahler, D.

    1985-01-01

    A geometric representation scheme called the B-spline cylinder, which consists of interpolation between pairs of uniform periodic cubic B-spline curves is discussed. This approach carries a number of interesting implications. For one, a single relatively simple database schema can be used to represent a reasonably large class of objects, since the spline representation is flexible enough to allow a large domain of representable objects at very little cost in data complexity. The model is thus very storage-efficient. A second feature of such a system is that it reduces to one the number of routines which the system must support to perform a given operation on objects. Third, the scheme enables easy conversion to and from other representations. The formal definition of the cylinder entity is given. In the geometric properties of the entity are explored and several operations on such objects are defined. Some general purpose criteria for evaluating any geometric representation scheme are introduced and the B-spline cylinder scheme according to these criteria is evaluated.

  14. Cardiac motion tracking with multilevel B-splines and SinMod from tagged MRI

    NASA Astrophysics Data System (ADS)

    Wang, Hui; Amini, Amir A.

    2011-03-01

    Cardiac motion analysis can play an important role in cardiac disease diagnosis. Tagged magnetic resonance imaging (MRI) has the ability to directly and non-invasively alter tissue magnetization and produce tags on the deforming tissue. This paper proposes an approach to analysis of tagged MR images using a multilevel B-splines fitting model incorporating phase information. The novelty of the proposed technique is that phase information is extracted from SinMod.1 By using real tag intersections extracted directly from tagged MR image data and virtual tag intersections extracted from phase information, both considered to be scattered data, multilevel B-spline fitting can result in accurate displacement motion fields. The B-spline approximation which also serves to remove noise in the displacement measurements is performed without specifying control point locations explicitly and is very fast. Dense virtual tag intersections based on SinMod were created and incorporated into the multilevel B-spline fitting process. Experimental results on simulated data from the 13- parameter kinematic model of Arts et al.2 and in vivo canine data demonstrate further improvement in accuracy and effectiveness of the proposed method.

  15. USE OF CUBIC SPLINES FOR ESTIMATING LACTATION CURVES OF HOLSTEIN COWS TREATED WITH BOVINE SOMATOTROPIN

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cubic splines can be used to model fixed and random effects of lactation curves. A total of 64,138 test-day observations for first lactation Holstein cows recorded as treated with bovine somatotropin (bST) and 138,008 test-day observations for untreated cows were obtained from Dairy Records Manageme...

  16. Gridding heterogeneous bathymetric data sets with stacked continuous curvature splines in tension

    NASA Astrophysics Data System (ADS)

    Hell, Benjamin; Jakobsson, Martin

    2011-12-01

    Gridding heterogeneous bathymetric data sets for the compilation of Digital bathymetric models (DBMs), poses specific problems when there are extreme variations in source data density. This requires gridding routines capable of subsampling high-resolution source data while preserving as much as possible of the small details, at the same time as interpolating in areas with sparse data without generating gridding artifacts. A frequently used gridding method generalizes bicubic spline interpolation and is known as continuous curvature splines in tension. This method is further enhanced in this article in order to specifically handle heterogeneous bathymetric source data. Our method constructs the final grid through stacking several surfaces of different resolutions, each generated using the splines in tension algorithm. With this approach, the gridding resolution is locally adjusted to the density of the source data set: Areas with high-resolution data are gridded at higher resolution than areas with sparse source data. In comparison with some of the most widely used gridding methods, our approach yields superior DBMs based on heterogeneous bathymetric data sets with regard to preserving small bathymetric details in the high-resolution source data, while minimizing interpolation artifacts in the sparsely data constrained regions. Common problems such as artifacts from ship tracklines are suppressed. Even if our stacked continuous curvature splines in tension gridding algorithm has been specifically designed to construct DBMs from heterogeneous bathymetric source data, it may be used to compile regular grids from other geoscientific measurements.

  17. High-order boundary layer analysis using B-splines on hybrid unstructured meshes

    NASA Astrophysics Data System (ADS)

    Zhang, Alvin; Sahni, Onkar

    2015-11-01

    Boundary layer flows are present in many engineering applications. In such flows, boundary layers span only a fraction of the characteristic length of the problem near the walls and possess large velocity gradients in the wall normal direction. This mandates use of a layered and graded mesh with a dense anisotropic h-resolution near the walls in order to accurately resolve the boundary layer. To account for complex geometries, a hybrid unstructured mesh approach is adopted. In this approach, the mesh is decomposed into wall normal and wall parallel directions. An alternative to an anisotropic h-resolution is to use a similar setting for both h- and p-resolution possibly with greater smoothness. For this purpose a mixed B-spline basis becomes attractive, where B-splines are used in the wall-normal direction and a C0 basis in the wall-parallel directions as well as the fully unstructured region of the mesh. A mixed B-spline basis offers several advantages over the traditional C0 basis utilized in finite element methods, which include greater accuracy per degree-of-freedom, ease of p-refinement as well as potential for k-refinement. In this study we demonstrate that the mixed B-spline basis, defined for the hybrid unstructured mesh, accurately models the boundary layer behavior.

  18. N-dimensional B-spline surface estimated by lofting for locally improving IRI

    NASA Astrophysics Data System (ADS)

    Koch, K.; Schmidt, M.

    2011-03-01

    N-dimensional surfaces are defined by the tensor product of B-spline basis functions. To estimate the unknown control points of these B-spline surfaces, the lofting method also called skinning method by cross-sectional curve fits is applied. It is shown by an analytical proof and numerically confirmed by the example of a four-dimensional surface that the results of the lofting method agree with the ones of the simultaneous estimation of the unknown control points. The numerical complexity for estimating vn control points by the lofting method is O(vn+1) while it results in O(v3n) for the simultaneous estimation. It is also shown that a B-spline surface estimated by a simultaneous estimation can be extended to higher dimensions by the lofting method, thus saving computer time. An application of this method is the local improvement of the International Reference Ionosphere (IRI), e.g. by the slant total electron content (STEC) obtained by dual-frequency observations of the Global Navigation Satellite System (GNSS). Three-dimensional B-spline surfaces at different time epochs have to be determined by the simultaneous estimation of the control points for this improvement. A four-dimensional representation in space and time of the electron density of the ionosphere is desirable. It can be obtained by the lofting method. This takes less computer time than determining the four-dimensional surface solely by a simultaneous estimation.

  19. Processing of materials of laser scanning of roads on the basis of recursive cubic splines

    NASA Astrophysics Data System (ADS)

    Esharov, E. A.; Shumilov, B. M.

    2015-01-01

    The problem of approximation of discrete dependence (ti, yi) by means of continuous function f(t) arises in tasks of the analysis and data processing of measurements yi at successive time points of ti. The solution of the presented task becomes significantly complicated in cases when measurements form a continuous stream, and the results of processing are required to be used before full reception of measurements. The computational schemes based on recurrent spline of degree 3 depths 1 and 2 which provide accuracy for polynomials of the third degree were used in the work. The main results consist in elaboration of mathematical formulas and the proof of stability of the constructed computing schemes. Relevance of the work consists in possibility of application of the constructed splines, for example, for processing materials of laser scanning of roads. Advantages of the constructed splines are the piecewise cubic character of the recovering of the simulated smooth spatial curve and possibility of nonuniform sampling on the route when the quantity of spline knots are less than the number of samples of a function. Examples of calculation of parameters of computing schemes, and also results of numerical experiments are presented.

  20. A mixed basis density functional approach for low dimensional systems with B-splines

    NASA Astrophysics Data System (ADS)

    Ren, Chung-Yuan; Hsue, Chen-Shiung; Chang, Yia-Chung

    2015-03-01

    A mixed basis approach based on density functional theory is employed for low dimensional systems. The basis functions are taken to be plane waves for the periodic direction multiplied by B-spline polynomials in the non-periodic direction. B-splines have the following advantages: (1) the associated matrix elements are sparse, (2) B-splines possess a superior treatment of derivatives, (3) B-splines are not associated with atomic positions when the geometry structure is optimized, making the geometry optimization easy to implement. With this mixed basis set we can directly calculate the total energy of the system instead of using the conventional supercell model with a slab sandwiched between vacuum regions. A generalized Lanczos-Krylov iterative method is implemented for the diagonalization of the Hamiltonian matrix. To demonstrate the present approach, we apply it to study the C(001)-(2×1) surface with the norm-conserving pseudopotential, the n-type δ-doped graphene, and graphene nanoribbon with Vanderbilt's ultra-soft pseudopotentials. All the resulting electronic structures were found to be in good agreement with those obtained by the VASP code, but with a reduced number of basis.

  1. Ridge Regression: A Regression Procedure for Analyzing Correlated Independent Variables.

    ERIC Educational Resources Information Center

    Rakow, Ernest A.

    Ridge regression is presented as an analytic technique to be used when predictor variables in a multiple linear regression situation are highly correlated, a situation which may result in unstable regression coefficients and difficulties in interpretation. Ridge regression avoids the problem of selection of variables that may occur in stepwise…

  2. Ridge Regression Signal Processing

    NASA Technical Reports Server (NTRS)

    Kuhl, Mark R.

    1990-01-01

    The introduction of the Global Positioning System (GPS) into the National Airspace System (NAS) necessitates the development of Receiver Autonomous Integrity Monitoring (RAIM) techniques. In order to guarantee a certain level of integrity, a thorough understanding of modern estimation techniques applied to navigational problems is required. The extended Kalman filter (EKF) is derived and analyzed under poor geometry conditions. It was found that the performance of the EKF is difficult to predict, since the EKF is designed for a Gaussian environment. A novel approach is implemented which incorporates ridge regression to explain the behavior of an EKF in the presence of dynamics under poor geometry conditions. The basic principles of ridge regression theory are presented, followed by the derivation of a linearized recursive ridge estimator. Computer simulations are performed to confirm the underlying theory and to provide a comparative analysis of the EKF and the recursive ridge estimator.

  3. Fast Censored Linear Regression

    PubMed Central

    HUANG, YIJIAN

    2013-01-01

    Weighted log-rank estimating function has become a standard estimation method for the censored linear regression model, or the accelerated failure time model. Well established statistically, the estimator defined as a consistent root has, however, rather poor computational properties because the estimating function is neither continuous nor, in general, monotone. We propose a computationally efficient estimator through an asymptotics-guided Newton algorithm, in which censored quantile regression methods are tailored to yield an initial consistent estimate and a consistent derivative estimate of the limiting estimating function. We also develop fast interval estimation with a new proposal for sandwich variance estimation. The proposed estimator is asymptotically equivalent to the consistent root estimator and barely distinguishable in samples of practical size. However, computation time is typically reduced by two to three orders of magnitude for point estimation alone. Illustrations with clinical applications are provided. PMID:24347802

  4. Mathematical modelling for the drying method and smoothing drying rate using cubic spline for seaweed Kappaphycus Striatum variety Durian in a solar dryer

    NASA Astrophysics Data System (ADS)

    M Ali, M. K.; Ruslan, M. H.; Muthuvalu, M. S.; Wong, J.; Sulaiman, J.; Yasir, S. Md.

    2014-06-01

    The solar drying experiment of seaweed using Green V-Roof Hybrid Solar Drier (GVRHSD) was conducted in Semporna, Sabah under the metrological condition in Malaysia. Drying of sample seaweed in GVRHSD reduced the moisture content from about 93.4% to 8.2% in 4 days at average solar radiation of about 600W/m2 and mass flow rate about 0.5 kg/s. Generally the plots of drying rate need more smoothing compared moisture content data. Special cares is needed at low drying rates and moisture contents. It is shown the cubic spline (CS) have been found to be effective for moisture-time curves. The idea of this method consists of an approximation of data by a CS regression having first and second derivatives. The analytical differentiation of the spline regression permits the determination of instantaneous rate. The method of minimization of the functional of average risk was used successfully to solve the problem. This method permits to obtain the instantaneous rate to be obtained directly from the experimental data. The drying kinetics was fitted with six published exponential thin layer drying models. The models were fitted using the coefficient of determination (R2), and root mean square error (RMSE). The modeling of models using raw data tested with the possible of exponential drying method. The result showed that the model from Two Term was found to be the best models describe the drying behavior. Besides that, the drying rate smoothed using CS shows to be effective method for moisture-time curves good estimators as well as for the missing moisture content data of seaweed Kappaphycus Striatum Variety Durian in Solar Dryer under the condition tested.

  5. Mathematical modelling for the drying method and smoothing drying rate using cubic spline for seaweed Kappaphycus Striatum variety Durian in a solar dryer

    SciTech Connect

    M Ali, M. K. E-mail: eutoco@gmail.com; Ruslan, M. H. E-mail: eutoco@gmail.com; Muthuvalu, M. S. E-mail: jumat@ums.edu.my; Wong, J. E-mail: jumat@ums.edu.my; Sulaiman, J. E-mail: hafidzruslan@eng.ukm.my; Yasir, S. Md. E-mail: hafidzruslan@eng.ukm.my

    2014-06-19

    The solar drying experiment of seaweed using Green V-Roof Hybrid Solar Drier (GVRHSD) was conducted in Semporna, Sabah under the metrological condition in Malaysia. Drying of sample seaweed in GVRHSD reduced the moisture content from about 93.4% to 8.2% in 4 days at average solar radiation of about 600W/m{sup 2} and mass flow rate about 0.5 kg/s. Generally the plots of drying rate need more smoothing compared moisture content data. Special cares is needed at low drying rates and moisture contents. It is shown the cubic spline (CS) have been found to be effective for moisture-time curves. The idea of this method consists of an approximation of data by a CS regression having first and second derivatives. The analytical differentiation of the spline regression permits the determination of instantaneous rate. The method of minimization of the functional of average risk was used successfully to solve the problem. This method permits to obtain the instantaneous rate to be obtained directly from the experimental data. The drying kinetics was fitted with six published exponential thin layer drying models. The models were fitted using the coefficient of determination (R{sup 2}), and root mean square error (RMSE). The modeling of models using raw data tested with the possible of exponential drying method. The result showed that the model from Two Term was found to be the best models describe the drying behavior. Besides that, the drying rate smoothed using CS shows to be effective method for moisture-time curves good estimators as well as for the missing moisture content data of seaweed Kappaphycus Striatum Variety Durian in Solar Dryer under the condition tested.

  6. Orthogonal Regression: A Teaching Perspective

    ERIC Educational Resources Information Center

    Carr, James R.

    2012-01-01

    A well-known approach to linear least squares regression is that which involves minimizing the sum of squared orthogonal projections of data points onto the best fit line. This form of regression is known as orthogonal regression, and the linear model that it yields is known as the major axis. A similar method, reduced major axis regression, is…

  7. Small and large deformation analysis with the p- and B-spline versions of the Finite Cell Method

    NASA Astrophysics Data System (ADS)

    Schillinger, Dominik; Ruess, Martin; Zander, Nils; Bazilevs, Yuri; Düster, Alexander; Rank, Ernst

    2012-10-01

    The Finite Cell Method (FCM) is an embedded domain method, which combines the fictitious domain approach with high-order finite elements, adaptive integration, and weak imposition of unfitted Dirichlet boundary conditions. For smooth problems, FCM has been shown to achieve exponential rates of convergence in energy norm, while its structured cell grid guarantees simple mesh generation irrespective of the geometric complexity involved. The present contribution first unhinges the FCM concept from a special high-order basis. Several benchmarks of linear elasticity and a complex proximal femur bone with inhomogeneous material demonstrate that for small deformation analysis, FCM works equally well with basis functions of the p-version of the finite element method or high-order B-splines. Turning to large deformation analysis, it is then illustrated that a straightforward geometrically nonlinear FCM formulation leads to the loss of uniqueness of the deformation map in the fictitious domain. Therefore, a modified FCM formulation is introduced, based on repeated deformation resetting, which assumes for the fictitious domain the deformation-free reference configuration after each Newton iteration. Numerical experiments show that this intervention allows for stable nonlinear FCM analysis, preserving the full range of advantages of linear elastic FCM, in particular exponential rates of convergence. Finally, the weak imposition of unfitted Dirichlet boundary conditions via the penalty method, the robustness of FCM under severe mesh distortion, and the large deformation analysis of a complex voxel-based metal foam are addressed.

  8. Correlation and simple linear regression.

    PubMed

    Eberly, Lynn E

    2007-01-01

    This chapter highlights important steps in using correlation and simple linear regression to address scientific questions about the association of two continuous variables with each other. These steps include estimation and inference, assessing model fit, the connection between regression and ANOVA, and study design. Examples in microbiology are used throughout. This chapter provides a framework that is helpful in understanding more complex statistical techniques, such as multiple linear regression, linear mixed effects models, logistic regression, and proportional hazards regression. PMID:18450049

  9. Incremental hierarchical discriminant regression.

    PubMed

    Weng, Juyang; Hwang, Wey-Shiuan

    2007-03-01

    This paper presents incremental hierarchical discriminant regression (IHDR) which incrementally builds a decision tree or regression tree for very high-dimensional regression or decision spaces by an online, real-time learning system. Biologically motivated, it is an approximate computational model for automatic development of associative cortex, with both bottom-up sensory inputs and top-down motor projections. At each internal node of the IHDR tree, information in the output space is used to automatically derive the local subspace spanned by the most discriminating features. Embedded in the tree is a hierarchical probability distribution model used to prune very unlikely cases during the search. The number of parameters in the coarse-to-fine approximation is dynamic and data-driven, enabling the IHDR tree to automatically fit data with unknown distribution shapes (thus, it is difficult to select the number of parameters up front). The IHDR tree dynamically assigns long-term memory to avoid the loss-of-memory problem typical with a global-fitting learning algorithm for neural networks. A major challenge for an incrementally built tree is that the number of samples varies arbitrarily during the construction process. An incrementally updated probability model, called sample-size-dependent negative-log-likelihood (SDNLL) metric is used to deal with large sample-size cases, small sample-size cases, and unbalanced sample-size cases, measured among different internal nodes of the IHDR tree. We report experimental results for four types of data: synthetic data to visualize the behavior of the algorithms, large face image data, continuous video stream from robot navigation, and publicly available data sets that use human defined features. PMID:17385628

  10. Streamflow forecasting using functional regression

    NASA Astrophysics Data System (ADS)

    Masselot, Pierre; Dabo-Niang, Sophie; Chebana, Fateh; Ouarda, Taha B. M. J.

    2016-07-01

    Streamflow, as a natural phenomenon, is continuous in time and so are the meteorological variables which influence its variability. In practice, it can be of interest to forecast the whole flow curve instead of points (daily or hourly). To this end, this paper introduces the functional linear models and adapts it to hydrological forecasting. More precisely, functional linear models are regression models based on curves instead of single values. They allow to consider the whole process instead of a limited number of time points or features. We apply these models to analyse the flow volume and the whole streamflow curve during a given period by using precipitations curves. The functional model is shown to lead to encouraging results. The potential of functional linear models to detect special features that would have been hard to see otherwise is pointed out. The functional model is also compared to the artificial neural network approach and the advantages and disadvantages of both models are discussed. Finally, future research directions involving the functional model in hydrology are presented.

  11. Polychromatic sparse image reconstruction and mass attenuation spectrum estimation via B-spline basis function expansion

    NASA Astrophysics Data System (ADS)

    Gu, Renliang; Dogandžić, Aleksandar

    2015-03-01

    We develop a sparse image reconstruction method for polychromatic computed tomography (CT) measurements under the blind scenario where the material of the inspected object and the incident energy spectrum are unknown. To obtain a parsimonious measurement model parameterization, we first rewrite the measurement equation using our mass-attenuation parameterization, which has the Laplace integral form. The unknown mass-attenuation spectrum is expanded into basis functions using a B-spline basis of order one. We develop a block coordinate-descent algorithm for constrained minimization of a penalized negative log-likelihood function, where constraints and penalty terms ensure nonnegativity of the spline coefficients and sparsity of the density map image in the wavelet domain. This algorithm alternates between a Nesterov's proximal-gradient step for estimating the density map image and an active-set step for estimating the incident spectrum parameters. Numerical simulations demonstrate the performance of the proposed scheme.

  12. Two-dimensional mesh embedding for Galerkin B-spline methods

    NASA Technical Reports Server (NTRS)

    Shariff, Karim; Moser, Robert D.

    1995-01-01

    A number of advantages result from using B-splines as basis functions in a Galerkin method for solving partial differential equations. Among them are arbitrary order of accuracy and high resolution similar to that of compact schemes but without the aliasing error. This work develops another property, namely, the ability to treat semi-structured embedded or zonal meshes for two-dimensional geometries. This can drastically reduce the number of grid points in many applications. Both integer and non-integer refinement ratios are allowed. The report begins by developing an algorithm for choosing basis functions that yield the desired mesh resolution. These functions are suitable products of one-dimensional B-splines. Finally, test cases for linear scalar equations such as the Poisson and advection equation are presented. The scheme is conservative and has uniformly high order of accuracy throughout the domain.

  13. Polychromatic sparse image reconstruction and mass attenuation spectrum estimation via B-spline basis function expansion

    SciTech Connect

    Gu, Renliang E-mail: ald@iastate.edu; Dogandžić, Aleksandar E-mail: ald@iastate.edu

    2015-03-31

    We develop a sparse image reconstruction method for polychromatic computed tomography (CT) measurements under the blind scenario where the material of the inspected object and the incident energy spectrum are unknown. To obtain a parsimonious measurement model parameterization, we first rewrite the measurement equation using our mass-attenuation parameterization, which has the Laplace integral form. The unknown mass-attenuation spectrum is expanded into basis functions using a B-spline basis of order one. We develop a block coordinate-descent algorithm for constrained minimization of a penalized negative log-likelihood function, where constraints and penalty terms ensure nonnegativity of the spline coefficients and sparsity of the density map image in the wavelet domain. This algorithm alternates between a Nesterov’s proximal-gradient step for estimating the density map image and an active-set step for estimating the incident spectrum parameters. Numerical simulations demonstrate the performance of the proposed scheme.

  14. Numerical solution of fractional differential equations using cubic B-spline wavelet collocation method

    NASA Astrophysics Data System (ADS)

    Li, Xinxiu

    2012-10-01

    Physical processes with memory and hereditary properties can be best described by fractional differential equations due to the memory effect of fractional derivatives. For that reason reliable and efficient techniques for the solution of fractional differential equations are needed. Our aim is to generalize the wavelet collocation method to fractional differential equations using cubic B-spline wavelet. Analytical expressions of fractional derivatives in Caputo sense for cubic B-spline functions are presented. The main characteristic of the approach is that it converts such problems into a system of algebraic equations which is suitable for computer programming. It not only simplifies the problem but also speeds up the computation. Numerical results demonstrate the validity and applicability of the method to solve fractional differential equation.

  15. Inverting travel times with a triplication. [spline fitting technique applied to lunar seismic data reduction

    NASA Technical Reports Server (NTRS)

    Jarosch, H. S.

    1982-01-01

    A method based on the use of constrained spline fits is used to overcome the difficulties arising when body-wave data in the form of T-delta are reduced to the tau-p form in the presence of cusps. In comparison with unconstrained spline fits, the method proposed here tends to produce much smoother models which lie approximately in the middle of the bounds produced by the extremal method. The method is noniterative and, therefore, computationally efficient. The method is applied to the lunar seismic data, where at least one triplication is presumed to occur in the P-wave travel-time curve. It is shown, however, that because of an insufficient number of data points for events close to the antipode of the center of the lunar network, the present analysis is not accurate enough to resolve the problem of a possible lunar core.

  16. Ridge regression processing

    NASA Technical Reports Server (NTRS)

    Kuhl, Mark R.

    1990-01-01

    Current navigation requirements depend on a geometric dilution of precision (GDOP) criterion. As long as the GDOP stays below a specific value, navigation requirements are met. The GDOP will exceed the specified value when the measurement geometry becomes too collinear. A new signal processing technique, called Ridge Regression Processing, can reduce the effects of nearly collinear measurement geometry; thereby reducing the inflation of the measurement errors. It is shown that the Ridge signal processor gives a consistently better mean squared error (MSE) in position than the Ordinary Least Mean Squares (OLS) estimator. The applicability of this technique is currently being investigated to improve the following areas: receiver autonomous integrity monitoring (RAIM), coverage requirements, availability requirements, and precision approaches.

  17. A B-Spline-Based Colocation Method to Approximate the Solutions to the Equations of Fluid Dynamics

    SciTech Connect

    M. D. Landon; R. W. Johnson

    1999-07-01

    The potential of a B-spline collocation method for numerically solving the equations of fluid dynamics is discussed. It is known that B-splines can resolve complex curves with drastically fewer data than can their standard shape function counterparts. This feature promises to allow much faster numerical simulations of fluid flow than standard finite volume/finite element methods without sacrificing accuracy. An example channel flow problem is solved using the method.

  18. A B-Spline-Based Colocation Method to Approximate the Solutions to the Equations of Fluid Dynamics

    SciTech Connect

    Johnson, Richard Wayne; Landon, Mark Dee

    1999-07-01

    The potential of a B-spline collocation method for numerically solving the equations of fluid dynamics is discussed. It is known that B-splines can resolve curves with drastically fewer data than can their standard shape function counterparts. This feature promises to allow much faster numerical simulations of fluid flow than standard finite volume/finite element methods without sacrificing accuracy. An example channel flow problem is solved using the method.

  19. A spline-based parameter estimation technique for static models of elastic structures

    NASA Technical Reports Server (NTRS)

    Dutt, P.; Taasan, S.

    1986-01-01

    The problem of identifying the spatially varying coefficient of elasticity using an observed solution to the forward problem is considered. Under appropriate conditions this problem can be treated as a first order hyperbolic equation in the unknown coefficient. Some continuous dependence results are developed for this problem and a spline-based technique is proposed for approximating the unknown coefficient, based on these results. The convergence of the numerical scheme is established and error estimates obtained.

  20. A spline-based parameter estimation technique for static models of elastic structures

    NASA Technical Reports Server (NTRS)

    Dutt, P.; Ta'asan, S.

    1989-01-01

    The problem of identifying the spatially varying coefficient of elasticity using an observed solution to the forward problem is considered. Under appropriate conditions this problem can be treated as a first order hyperbolic equation in the unknown coefficient. Some continuous dependence results are developed for this problem and a spline-based technique is proposed for approximating the unknown coefficient, based on these results. The convergence of the numerical scheme is established and error estimates obtained.

  1. Quadratic spline collocation and parareal deferred correction method for parabolic PDEs

    NASA Astrophysics Data System (ADS)

    Liu, Jun; Wang, Yan; Li, Rongjian

    2016-06-01

    In this paper, we consider a linear parabolic PDE, and use optimal quadratic spline collocation (QSC) methods for the space discretization, proceed the parareal technique on the time domain. Meanwhile, deferred correction technique is used to improve the accuracy during the iterations. The error estimation is presented and the stability is analyzed. Numerical experiments, which is carried out on a parallel computer with 40 CPUs, are attached to exhibit the effectiveness of the hybrid algorithm.

  2. Estimation of Some Parameters from Morse-Morse-Spline-Van Der Waals Intermolecular Potential

    SciTech Connect

    Coroiu, I.

    2007-04-23

    Some parameters such as transport cross-sections and isotopic thermal diffusion factor have been calculated from an improved intermolecular potential, Morse-Morse-Spline-van der Waals (MMSV) potential proposed by R.A. Aziz et al. The treatment was completely classical and no corrections for quantum effects were made. The results would be employed for isotope separations of different spherical and quasi-spherical molecules.

  3. Numerical solutions of the reaction diffusion system by using exponential cubic B-spline collocation algorithms

    NASA Astrophysics Data System (ADS)

    Ersoy, Ozlem; Dag, Idris

    2015-12-01

    The solutions of the reaction-diffusion system are given by method of collocation based on the exponential B-splines. Thus the reaction-diffusion systemturns into an iterative banded algebraic matrix equation. Solution of the matrix equation is carried out byway of Thomas algorithm. The present methods test on both linear and nonlinear problems. The results are documented to compare with some earlier studies by use of L∞ and relative error norm for problems respectively.

  4. A fourth order spline collocation approach for a business cycle model

    NASA Astrophysics Data System (ADS)

    Sayfy, A.; Khoury, S.; Ibdah, H.

    2013-10-01

    A collocation approach, based on a fourth order cubic B-splines is presented for the numerical solution of a Kaleckian business cycle model formulated by a nonlinear delay differential equation. The equation is approximated and the nonlinearity is handled by employing an iterative scheme arising from Newton's method. It is shown that the model exhibits a conditionally dynamical stable cycle. The fourth-order rate of convergence of the scheme is verified numerically for different special cases.

  5. Optimal Knot Selection for Least-squares Fitting of Noisy Data with Spline Functions

    SciTech Connect

    Jerome Blair

    2008-05-15

    An automatic data-smoothing algorithm for data from digital oscilloscopes is described. The algorithm adjusts the bandwidth of the filtering as a function of time to provide minimum mean squared error at each time. It produces an estimate of the root-mean-square error as a function of time and does so without any statistical assumptions about the unknown signal. The algorithm is based on least-squares fitting to the data of cubic spline functions.

  6. Direct Numerical Simulation of Incompressible Pipe Flow Using a B-Spline Spectral Method

    NASA Technical Reports Server (NTRS)

    Loulou, Patrick; Moser, Robert D.; Mansour, Nagi N.; Cantwell, Brian J.

    1997-01-01

    A numerical method based on b-spline polynomials was developed to study incompressible flows in cylindrical geometries. A b-spline method has the advantages of possessing spectral accuracy and the flexibility of standard finite element methods. Using this method it was possible to ensure regularity of the solution near the origin, i.e. smoothness and boundedness. Because b-splines have compact support, it is also possible to remove b-splines near the center to alleviate the constraint placed on the time step by an overly fine grid. Using the natural periodicity in the azimuthal direction and approximating the streamwise direction as periodic, so-called time evolving flow, greatly reduced the cost and complexity of the computations. A direct numerical simulation of pipe flow was carried out using the method described above at a Reynolds number of 5600 based on diameter and bulk velocity. General knowledge of pipe flow and the availability of experimental measurements make pipe flow the ideal test case with which to validate the numerical method. Results indicated that high flatness levels of the radial component of velocity in the near wall region are physical; regions of high radial velocity were detected and appear to be related to high speed streaks in the boundary layer. Budgets of Reynolds stress transport equations showed close similarity with those of channel flow. However contrary to channel flow, the log layer of pipe flow is not homogeneous for the present Reynolds number. A topological method based on a classification of the invariants of the velocity gradient tensor was used. Plotting iso-surfaces of the discriminant of the invariants proved to be a good method for identifying vortical eddies in the flow field.

  7. A mixed basis density functional approach for one-dimensional systems with B-splines

    NASA Astrophysics Data System (ADS)

    Ren, Chung-Yuan; Chang, Yia-Chung; Hsue, Chen-Shiung

    2016-05-01

    A mixed basis approach based on density functional theory is extended to one-dimensional (1D) systems. The basis functions here are taken to be the localized B-splines for the two finite non-periodic dimensions and the plane waves for the third periodic direction. This approach will significantly reduce the number of the basis and therefore is computationally efficient for the diagonalization of the Kohn-Sham Hamiltonian. For 1D systems, B-spline polynomials are particularly useful and efficient in two-dimensional spatial integrations involved in the calculations because of their absolute localization. Moreover, B-splines are not associated with atomic positions when the geometry structure is optimized, making the geometry optimization easy to implement. With such a basis set we can directly calculate the total energy of the isolated system instead of using the conventional supercell model with artificial vacuum regions among the replicas along the two non-periodic directions. The spurious Coulomb interaction between the charged defect and its repeated images by the supercell approach for charged systems can also be avoided. A rigorous formalism for the long-range Coulomb potential of both neutral and charged 1D systems under the mixed basis scheme will be derived. To test the present method, we apply it to study the infinite carbon-dimer chain, graphene nanoribbon, carbon nanotube and positively-charged carbon-dimer chain. The resulting electronic structures are presented and discussed in detail.

  8. Nonlinear registration using B-spline feature approximation and image similarity

    NASA Astrophysics Data System (ADS)

    Kim, June-Sic; Kim, Jae Seok; Kim, In Young; Kim, Sun Il

    2001-07-01

    The warping methods are broadly classified into the image-matching method based on similar pixel intensity distribution and the feature-matching method using distinct anatomical feature. Feature based methods may fail to match local variation of two images. However, the method globally matches features well. False matches corresponding to local minima of the underlying energy functions can be obtained through the similarity based methods. To avoid local minima problem, we proposes non-linear deformable registration method utilizing global information of feature matching and the local information of image matching. To define the feature, gray matter and white matter of brain tissue are segmented by Fuzzy C-Mean (FCM) algorithm. B-spline approximation technique is used for feature matching. We use a multi-resolution B-spline approximation method which modifies multilevel B-spline interpolation method. It locally changes the resolution of the control lattice in proportion to the distance between features of two images. Mutual information is used for similarity measure. The deformation fields are locally refined until maximize the similarity. In two 3D T1 weighted MRI test, this method maintained the accuracy by conventional image matching methods without the local minimum problem.

  9. Generalized b-spline subdivision-surface wavelets and lossless compression

    SciTech Connect

    Bertram, M; Duchaineau, M A; Hamann, B; Joy, K I

    1999-11-24

    We present a new construction of wavelets on arbitrary two-manifold topology for geometry compression. The constructed wavelets generalize symmetric tensor product wavelets with associated B-spline scaling functions to irregular polygonal base mesh domains. The wavelets and scaling functions are tensor products almost everywhere, except in the neighborhoods of some extraordinary points (points of valence unequal four) in the base mesh that defines the topology. The compression of arbitrary polygonal meshes representing isosurfaces of scalar-valued trivariate functions is a primary application. The main contribution of this paper is the generalization of lifted symmetric tensor product B-spline wavelets to two-manifold geometries. Surfaces composed of B-spline patches can easily be converted to this scheme. We present a lossless compression method for geometries with or without associated functions like color, texture, or normals. The new wavelet transform is highly efficient and can represent surfaces at any level of resolution with high degrees of continuity, except at a finite number of extraordinary points in the base mesh. In the neighborhoods of these points detail can be added to the surface to approximate any degree of continuity.

  10. Algebraic grid generation using tensor product B-splines. Ph.D. Thesis

    NASA Technical Reports Server (NTRS)

    Saunders, B. V.

    1985-01-01

    Finite difference methods are more successful if the accompanying grid has lines which are smooth and nearly orthogonal. The development of an algorithm which produces such a grid when given the boundary description. Topological considerations in structuring the grid generation mapping are discussed. The concept of the degree of a mapping and how it can be used to determine what requirements are necessary if a mapping is to produce a suitable grid is examined. The grid generation algorithm uses a mapping composed of bicubic B-splines. Boundary coefficients are chosen so that the splines produce Schoenberg's variation diminishing spline approximation to the boundary. Interior coefficients are initially chosen to give a variation diminishing approximation to the transfinite bilinear interpolant of the function mapping the boundary of the unit square onto the boundary grid. The practicality of optimizing the grid by minimizing a functional involving the Jacobian of the grid generation mapping at each interior grid point and the dot product of vectors tangent to the grid lines is investigated. Grids generated by using the algorithm are presented.

  11. A nonrational B-spline profiled horn with high displacement amplification for ultrasonic welding.

    PubMed

    Nguyen, Huu-Tu; Nguyen, Hai-Dang; Uan, Jun-Yen; Wang, Dung-An

    2014-12-01

    A new horn with high displacement amplification for ultrasonic welding is developed. The profile of the horn is a nonrational B-spline curve with an open uniform knot vector. The ultrasonic actuation of the horn exploits the first longitudinal displacement mode of the horn. The horn is designed by an optimization scheme and finite element analyses. Performances of the proposed horn have been evaluated by experiments. The displacement amplification of the proposed horn is 41.4% and 8.6% higher than that of the traditional catenoidal horn and a Bézier-profile horn, respectively, with the same length and end surface diameters. The developed horn has a lower displacement amplification than the nonuniform rational B-spline profiled horn but a much smoother stress distribution. The developed horn, the catenoidal horn, and the Bézier horn are fabricated and used for ultrasonic welding of lap-shear specimens. The bonding strength of the joints welded by the open uniform nonrational B-spline (OUNBS) horn is the highest among the three horns for the various welding parameters considered. The locations of the failure mode and the distribution of the voids of the specimens are investigated to explain the reason of the high bonding strength achieved by the OUNBS horn. PMID:25081407

  12. Noise correction on LANDSAT images using a spline-like algorithm

    NASA Technical Reports Server (NTRS)

    Vijaykumar, N. L. (Principal Investigator); Dias, L. A. V.

    1985-01-01

    Many applications using LANDSAT images face a dilemma: the user needs a certain scene (for example, a flooded region), but that particular image may present interference or noise in form of horizontal stripes. During automatic analysis, this interference or noise may cause false readings of the region of interest. In order to minimize this interference or noise, many solutions are used, for instane, that of using the average (simple or weighted) values of the neighboring vertical points. In the case of high interference (more than one adjacent line lost) the method of averages may not suit the desired purpose. The solution proposed is to use a spline-like algorithm (weighted splines). This type of interpolation is simple to be computer implemented, fast, uses only four points in each interval, and eliminates the necessity of solving a linear equation system. In the normal mode of operation, the first and second derivatives of the solution function are continuous and determined by data points, as in cubic splines. It is possible, however, to impose the values of the first derivatives, in order to account for shapr boundaries, without increasing the computational effort. Some examples using the proposed method are also shown.

  13. Drill string splined resilient tubular telescopic joint for balanced load drilling of deep holes

    SciTech Connect

    Garrett, W.R.

    1981-08-04

    A drill string splined resilient tubular telescopic joint for balanced load deep well drilling comprises a double acting damper having a very low spring rate upon both extension and contraction from the zero deflection condition. Preferably the spring means itself is a double acting compression spring means wherein the same spring means is compressed whether the joint is extended or contracted. The damper has a like low spring rate over a considerable range of deflection, both upon extension and contraction of the joint, but a gradually then rapidly increased spring rate upon approaching the travel limits in each direction. Stacks of spring rings are employed for the spring means, the rings being either shaped elastomer-metal sandwiches or, preferably, roller belleville springs. The spline and spring means are disposed in an annular chamber formed by mandrel and barrel members constituting the telescopic joint. The spring rings make only such line contact with one of the telescoping members as is required for guidance therefrom, and no contact with the other member. The chamber containing the spring means, and also containing the spline means, is filled with lubricant, the chamber being sealed with a pressure seal at its lower end and an inverted floating seal at its upper end. Magnetic and electrical means are provided to check for the presence and condition of the lubricant. To increase load capacity the spring means is made of a number of components acting in parallel.

  14. Drill string splined resilient tubular telescopic joint for balanced load drilling of deep holes

    SciTech Connect

    Garrett, W.R.

    1984-03-06

    A drill string splined resilient tubular telescopic joint for balanced load deep well drilling comprises a double acting damper having a very low spring rate upon both extension and contraction from the zero deflection condition. Stacks of spring rings are employed for the spring means, the rings being either shaped elastomer-metal sandwiches or, preferably, roller Belleville springs. The spline and spring means are disposed in an annular chamber formed by mandrel and barrel members constituting the telescopic joint. The chamber containing the spring means, and also containing the spline means, is filled with lubricant, the chamber being sealed with a pressure seal at its lower end and an inverted floating seal at its upper end. A prototype includes of this a bellows seal instead of the floating seal at the upper end of the tool, and a bellows in the side of the lubricant chamber provides volume compensation. A second lubricant chamber is provided below the pressure seal, the lower end of the second chamber being closed by a bellows seal and a further bellows in the side of the second chamber providing volume compensation. Modifications provide hydraulic jars.

  15. Recursive Algorithm For Linear Regression

    NASA Technical Reports Server (NTRS)

    Varanasi, S. V.

    1988-01-01

    Order of model determined easily. Linear-regression algorithhm includes recursive equations for coefficients of model of increased order. Algorithm eliminates duplicative calculations, facilitates search for minimum order of linear-regression model fitting set of data satisfactory.

  16. Transfer Learning Based on Logistic Regression

    NASA Astrophysics Data System (ADS)

    Paul, A.; Rottensteiner, F.; Heipke, C.

    2015-08-01

    In this paper we address the problem of classification of remote sensing images in the framework of transfer learning with a focus on domain adaptation. The main novel contribution is a method for transductive transfer learning in remote sensing on the basis of logistic regression. Logistic regression is a discriminative probabilistic classifier of low computational complexity, which can deal with multiclass problems. This research area deals with methods that solve problems in which labelled training data sets are assumed to be available only for a source domain, while classification is needed in the target domain with different, yet related characteristics. Classification takes place with a model of weight coefficients for hyperplanes which separate features in the transformed feature space. In term of logistic regression, our domain adaptation method adjusts the model parameters by iterative labelling of the target test data set. These labelled data features are iteratively added to the current training set which, at the beginning, only contains source features and, simultaneously, a number of source features are deleted from the current training set. Experimental results based on a test series with synthetic and real data constitutes a first proof-of-concept of the proposed method.

  17. Numerical discretization-based estimation methods for ordinary differential equation models via penalized spline smoothing with applications in biomedical research.

    PubMed

    Wu, Hulin; Xue, Hongqi; Kumar, Arun

    2012-06-01

    Differential equations are extensively used for modeling dynamics of physical processes in many scientific fields such as engineering, physics, and biomedical sciences. Parameter estimation of differential equation models is a challenging problem because of high computational cost and high-dimensional parameter space. In this article, we propose a novel class of methods for estimating parameters in ordinary differential equation (ODE) models, which is motivated by HIV dynamics modeling. The new methods exploit the form of numerical discretization algorithms for an ODE solver to formulate estimating equations. First, a penalized-spline approach is employed to estimate the state variables and the estimated state variables are then plugged in a discretization formula of an ODE solver to obtain the ODE parameter estimates via a regression approach. We consider three different order of discretization methods, Euler's method, trapezoidal rule, and Runge-Kutta method. A higher-order numerical algorithm reduces numerical error in the approximation of the derivative, which produces a more accurate estimate, but its computational cost is higher. To balance the computational cost and estimation accuracy, we demonstrate, via simulation studies, that the trapezoidal discretization-based estimate is the best and is recommended for practical use. The asymptotic properties for the proposed numerical discretization-based estimators are established. Comparisons between the proposed methods and existing methods show a clear benefit of the proposed methods in regards to the trade-off between computational cost and estimation accuracy. We apply the proposed methods t an HIV study to further illustrate the usefulness of the proposed approaches. PMID:22376200

  18. Multinomial logistic regression ensembles.

    PubMed

    Lee, Kyewon; Ahn, Hongshik; Moon, Hojin; Kodell, Ralph L; Chen, James J

    2013-05-01

    This article proposes a method for multiclass classification problems using ensembles of multinomial logistic regression models. A multinomial logit model is used as a base classifier in ensembles from random partitions of predictors. The multinomial logit model can be applied to each mutually exclusive subset of the feature space without variable selection. By combining multiple models the proposed method can handle a huge database without a constraint needed for analyzing high-dimensional data, and the random partition can improve the prediction accuracy by reducing the correlation among base classifiers. The proposed method is implemented using R, and the performance including overall prediction accuracy, sensitivity, and specificity for each category is evaluated on two real data sets and simulation data sets. To investigate the quality of prediction in terms of sensitivity and specificity, the area under the receiver operating characteristic (ROC) curve (AUC) is also examined. The performance of the proposed model is compared to a single multinomial logit model and it shows a substantial improvement in overall prediction accuracy. The proposed method is also compared with other classification methods such as the random forest, support vector machines, and random multinomial logit model. PMID:23611203

  19. Bayesian Spatial Quantile Regression

    PubMed Central

    Reich, Brian J.; Fuentes, Montserrat; Dunson, David B.

    2013-01-01

    Tropospheric ozone is one of the six criteria pollutants regulated by the United States Environmental Protection Agency under the Clean Air Act and has been linked with several adverse health effects, including mortality. Due to the strong dependence on weather conditions, ozone may be sensitive to climate change and there is great interest in studying the potential effect of climate change on ozone, and how this change may affect public health. In this paper we develop a Bayesian spatial model to predict ozone under different meteorological conditions, and use this model to study spatial and temporal trends and to forecast ozone concentrations under different climate scenarios. We develop a spatial quantile regression model that does not assume normality and allows the covariates to affect the entire conditional distribution, rather than just the mean. The conditional distribution is allowed to vary from site-to-site and is smoothed with a spatial prior. For extremely large datasets our model is computationally infeasible, and we develop an approximate method. We apply the approximate version of our model to summer ozone from 1997–2005 in the Eastern U.S., and use deterministic climate models to project ozone under future climate conditions. Our analysis suggests that holding all other factors fixed, an increase in daily average temperature will lead to the largest increase in ozone in the Industrial Midwest and Northeast. PMID:23459794

  20. Bayesian Spatial Quantile Regression.

    PubMed

    Reich, Brian J; Fuentes, Montserrat; Dunson, David B

    2011-03-01

    Tropospheric ozone is one of the six criteria pollutants regulated by the United States Environmental Protection Agency under the Clean Air Act and has been linked with several adverse health effects, including mortality. Due to the strong dependence on weather conditions, ozone may be sensitive to climate change and there is great interest in studying the potential effect of climate change on ozone, and how this change may affect public health. In this paper we develop a Bayesian spatial model to predict ozone under different meteorological conditions, and use this model to study spatial and temporal trends and to forecast ozone concentrations under different climate scenarios. We develop a spatial quantile regression model that does not assume normality and allows the covariates to affect the entire conditional distribution, rather than just the mean. The conditional distribution is allowed to vary from site-to-site and is smoothed with a spatial prior. For extremely large datasets our model is computationally infeasible, and we develop an approximate method. We apply the approximate version of our model to summer ozone from 1997-2005 in the Eastern U.S., and use deterministic climate models to project ozone under future climate conditions. Our analysis suggests that holding all other factors fixed, an increase in daily average temperature will lead to the largest increase in ozone in the Industrial Midwest and Northeast. PMID:23459794

  1. Canonical variate regression.

    PubMed

    Luo, Chongliang; Liu, Jin; Dey, Dipak K; Chen, Kun

    2016-07-01

    In many fields, multi-view datasets, measuring multiple distinct but interrelated sets of characteristics on the same set of subjects, together with data on certain outcomes or phenotypes, are routinely collected. The objective in such a problem is often two-fold: both to explore the association structures of multiple sets of measurements and to develop a parsimonious model for predicting the future outcomes. We study a unified canonical variate regression framework to tackle the two problems simultaneously. The proposed criterion integrates multiple canonical correlation analysis with predictive modeling, balancing between the association strength of the canonical variates and their joint predictive power on the outcomes. Moreover, the proposed criterion seeks multiple sets of canonical variates simultaneously to enable the examination of their joint effects on the outcomes, and is able to handle multivariate and non-Gaussian outcomes. An efficient algorithm based on variable splitting and Lagrangian multipliers is proposed. Simulation studies show the superior performance of the proposed approach. We demonstrate the effectiveness of the proposed approach in an [Formula: see text] intercross mice study and an alcohol dependence study. PMID:26861909

  2. Linear regression in astronomy. I

    NASA Technical Reports Server (NTRS)

    Isobe, Takashi; Feigelson, Eric D.; Akritas, Michael G.; Babu, Gutti Jogesh

    1990-01-01

    Five methods for obtaining linear regression fits to bivariate data with unknown or insignificant measurement errors are discussed: ordinary least-squares (OLS) regression of Y on X, OLS regression of X on Y, the bisector of the two OLS lines, orthogonal regression, and 'reduced major-axis' regression. These methods have been used by various researchers in observational astronomy, most importantly in cosmic distance scale applications. Formulas for calculating the slope and intercept coefficients and their uncertainties are given for all the methods, including a new general form of the OLS variance estimates. The accuracy of the formulas was confirmed using numerical simulations. The applicability of the procedures is discussed with respect to their mathematical properties, the nature of the astronomical data under consideration, and the scientific purpose of the regression. It is found that, for problems needing symmetrical treatment of the variables, the OLS bisector performs significantly better than orthogonal or reduced major-axis regression.

  3. On Quantile Regression in Reproducing Kernel Hilbert Spaces with Data Sparsity Constraint

    PubMed Central

    Zhang, Chong; Liu, Yufeng; Wu, Yichao

    2015-01-01

    For spline regressions, it is well known that the choice of knots is crucial for the performance of the estimator. As a general learning framework covering the smoothing splines, learning in a Reproducing Kernel Hilbert Space (RKHS) has a similar issue. However, the selection of training data points for kernel functions in the RKHS representation has not been carefully studied in the literature. In this paper we study quantile regression as an example of learning in a RKHS. In this case, the regular squared norm penalty does not perform training data selection. We propose a data sparsity constraint that imposes thresholding on the kernel function coefficients to achieve a sparse kernel function representation. We demonstrate that the proposed data sparsity method can have competitive prediction performance for certain situations, and have comparable performance in other cases compared to that of the traditional squared norm penalty. Therefore, the data sparsity method can serve as a competitive alternative to the squared norm penalty method. Some theoretical properties of our proposed method using the data sparsity constraint are obtained. Both simulated and real data sets are used to demonstrate the usefulness of our data sparsity constraint. PMID:27134575

  4. Bayesian nonparametric regression with varying residual density.

    PubMed

    Pati, Debdeep; Dunson, David B

    2014-02-01

    We consider the problem of robust Bayesian inference on the mean regression function allowing the residual density to change flexibly with predictors. The proposed class of models is based on a Gaussian process prior for the mean regression function and mixtures of Gaussians for the collection of residual densities indexed by predictors. Initially considering the homoscedastic case, we propose priors for the residual density based on probit stick-breaking (PSB) scale mixtures and symmetrized PSB (sPSB) location-scale mixtures. Both priors restrict the residual density to be symmetric about zero, with the sPSB prior more flexible in allowing multimodal densities. We provide sufficient conditions to ensure strong posterior consistency in estimating the regression function under the sPSB prior, generalizing existing theory focused on parametric residual distributions. The PSB and sPSB priors are generalized to allow residual densities to change nonparametrically with predictors through incorporating Gaussian processes in the stick-breaking components. This leads to a robust Bayesian regression procedure that automatically down-weights outliers and influential observations in a locally-adaptive manner. Posterior computation relies on an efficient data augmentation exact block Gibbs sampler. The methods are illustrated using simulated and real data applications. PMID:24465053

  5. Evaluating differential effects using regression interactions and regression mixture models

    PubMed Central

    Van Horn, M. Lee; Jaki, Thomas; Masyn, Katherine; Howe, George; Feaster, Daniel J.; Lamont, Andrea E.; George, Melissa R. W.; Kim, Minjung

    2015-01-01

    Research increasingly emphasizes understanding differential effects. This paper focuses on understanding regression mixture models, a relatively new statistical methods for assessing differential effects by comparing results to using an interactive term in linear regression. The research questions which each model answers, their formulation, and their assumptions are compared using Monte Carlo simulations and real data analysis. The capabilities of regression mixture models are described and specific issues to be addressed when conducting regression mixtures are proposed. The paper aims to clarify the role that regression mixtures can take in the estimation of differential effects and increase awareness of the benefits and potential pitfalls of this approach. Regression mixture models are shown to be a potentially effective exploratory method for finding differential effects when these effects can be defined by a small number of classes of respondents who share a typical relationship between a predictor and an outcome. It is also shown that the comparison between regression mixture models and interactions becomes substantially more complex as the number of classes increases. It is argued that regression interactions are well suited for direct tests of specific hypotheses about differential effects and regression mixtures provide a useful approach for exploring effect heterogeneity given adequate samples and study design. PMID:26556903

  6. Probabilistic Mixture Regression Models for Alignment of LC-MS Data

    PubMed Central

    Befekadu, Getachew K.; Tadesse, Mahlet G.; Tsai, Tsung-Heng; Ressom, Habtom W.

    2010-01-01

    A novel framework of a probabilistic mixture regression model (PMRM) is presented for alignment of liquid chromatography-mass spectrometry (LC-MS) data with respect to both retention time (RT) and mass-to-charge ratio (m/z). The expectation maximization algorithm is used to estimate the joint parameters of spline-based mixture regression models and prior transformation density models. The latter accounts for the variability in RT points, m/z values, and peak intensities. The applicability of PMRM for alignment of LC-MS data is demonstrated through three datasets. The performance of PMRM is compared with other alignment approaches including dynamic time warping, correlation optimized warping, and continuous profile model in terms of coefficient variation of replicate LC-MS runs and accuracy in detecting differentially abundant peptides/proteins. PMID:20837998

  7. An adaptive interpolation scheme for molecular potential energy surfaces.

    PubMed

    Kowalewski, Markus; Larsson, Elisabeth; Heryudono, Alfa

    2016-08-28

    The calculation of potential energy surfaces for quantum dynamics can be a time consuming task-especially when a high level of theory for the electronic structure calculation is required. We propose an adaptive interpolation algorithm based on polyharmonic splines combined with a partition of unity approach. The adaptive node refinement allows to greatly reduce the number of sample points by employing a local error estimate. The algorithm and its scaling behavior are evaluated for a model function in 2, 3, and 4 dimensions. The developed algorithm allows for a more rapid and reliable interpolation of a potential energy surface within a given accuracy compared to the non-adaptive version. PMID:27586901

  8. Convex Regression with Interpretable Sharp Partitions

    PubMed Central

    Petersen, Ashley; Simon, Noah; Witten, Daniela

    2016-01-01

    We consider the problem of predicting an outcome variable on the basis of a small number of covariates, using an interpretable yet non-additive model. We propose convex regression with interpretable sharp partitions (CRISP) for this task. CRISP partitions the covariate space into blocks in a data-adaptive way, and fits a mean model within each block. Unlike other partitioning methods, CRISP is fit using a non-greedy approach by solving a convex optimization problem, resulting in low-variance fits. We explore the properties of CRISP, and evaluate its performance in a simulation study and on a housing price data set.

  9. Linear regression in astronomy. II

    NASA Technical Reports Server (NTRS)

    Feigelson, Eric D.; Babu, Gutti J.

    1992-01-01

    A wide variety of least-squares linear regression procedures used in observational astronomy, particularly investigations of the cosmic distance scale, are presented and discussed. The classes of linear models considered are (1) unweighted regression lines, with bootstrap and jackknife resampling; (2) regression solutions when measurement error, in one or both variables, dominates the scatter; (3) methods to apply a calibration line to new data; (4) truncated regression models, which apply to flux-limited data sets; and (5) censored regression models, which apply when nondetections are present. For the calibration problem we develop two new procedures: a formula for the intercept offset between two parallel data sets, which propagates slope errors from one regression to the other; and a generalization of the Working-Hotelling confidence bands to nonstandard least-squares lines. They can provide improved error analysis for Faber-Jackson, Tully-Fisher, and similar cosmic distance scale relations.

  10. Quantile regression for climate data

    NASA Astrophysics Data System (ADS)

    Marasinghe, Dilhani Shalika

    Quantile regression is a developing statistical tool which is used to explain the relationship between response and predictor variables. This thesis describes two examples of climatology using quantile regression.Our main goal is to estimate derivatives of a conditional mean and/or conditional quantile function. We introduce a method to handle autocorrelation in the framework of quantile regression and used it with the temperature data. Also we explain some properties of the tornado data which is non-normally distributed. Even though quantile regression provides a more comprehensive view, when talking about residuals with the normality and the constant variance assumption, we would prefer least square regression for our temperature analysis. When dealing with the non-normality and non constant variance assumption, quantile regression is a better candidate for the estimation of the derivative.

  11. Evaluating Differential Effects Using Regression Interactions and Regression Mixture Models

    ERIC Educational Resources Information Center

    Van Horn, M. Lee; Jaki, Thomas; Masyn, Katherine; Howe, George; Feaster, Daniel J.; Lamont, Andrea E.; George, Melissa R. W.; Kim, Minjung

    2015-01-01

    Research increasingly emphasizes understanding differential effects. This article focuses on understanding regression mixture models, which are relatively new statistical methods for assessing differential effects by comparing results to using an interactive term in linear regression. The research questions which each model answers, their…

  12. Retro-regression--another important multivariate regression improvement.

    PubMed

    Randić, M

    2001-01-01

    We review the serious problem associated with instabilities of the coefficients of regression equations, referred to as the MRA (multivariate regression analysis) "nightmare of the first kind". This is manifested when in a stepwise regression a descriptor is included or excluded from a regression. The consequence is an unpredictable change of the coefficients of the descriptors that remain in the regression equation. We follow with consideration of an even more serious problem, referred to as the MRA "nightmare of the second kind", arising when optimal descriptors are selected from a large pool of descriptors. This process typically causes at different steps of the stepwise regression a replacement of several previously used descriptors by new ones. We describe a procedure that resolves these difficulties. The approach is illustrated on boiling points of nonanes which are considered (1) by using an ordered connectivity basis; (2) by using an ordering resulting from application of greedy algorithm; and (3) by using an ordering derived from an exhaustive search for optimal descriptors. A novel variant of multiple regression analysis, called retro-regression (RR), is outlined showing how it resolves the ambiguities associated with both "nightmares" of the first and the second kind of MRA. PMID:11410035

  13. Epidemiology of CKD Regression in Patients under Nephrology Care

    PubMed Central

    Borrelli, Silvio; Leonardis, Daniela; Minutolo, Roberto; Chiodini, Paolo; De Nicola, Luca; Esposito, Ciro; Mallamaci, Francesca; Zoccali, Carmine; Conte, Giuseppe

    2015-01-01

    Chronic Kidney Disease (CKD) regression is considered as an infrequent renal outcome, limited to early stages, and associated with higher mortality. However, prevalence, prognosis and the clinical correlates of CKD regression remain undefined in the setting of nephrology care. This is a multicenter prospective study in 1418 patients with established CKD (eGFR: 60–15 ml/min/1.73m²) under nephrology care in 47 outpatient clinics in Italy from a least one year. We defined CKD regressors as a ΔGFR ≥0 ml/min/1.73 m2/year. ΔGFR was estimated as the absolute difference between eGFR measured at baseline and at follow up visit after 18–24 months, respectively. Outcomes were End Stage Renal Disease (ESRD) and overall-causes Mortality.391 patients (27.6%) were identified as regressors as they showed an eGFR increase between the baseline visit in the renal clinic and the follow up visit. In multivariate regression analyses the regressor status was not associated with CKD stage. Low proteinuria was the main factor associated with CKD regression, accounting per se for 48% of the likelihood of this outcome. Lower systolic blood pressure, higher BMI and absence of autosomal polycystic disease (PKD) were additional predictors of CKD regression. In regressors, ESRD risk was 72% lower (HR: 0.28; 95% CI 0.14–0.57; p<0.0001) while mortality risk did not differ from that in non-regressors (HR: 1.16; 95% CI 0.73–1.83; p = 0.540). Spline models showed that the reduction of ESRD risk associated with positive ΔGFR was attenuated in advanced CKD stage. CKD regression occurs in about one-fourth patients receiving renal care in nephrology units and correlates with low proteinuria, BP and the absence of PKD. This condition portends better renal prognosis, mostly in earlier CKD stages, with no excess risk for mortality. PMID:26462071

  14. Spline Driven: High Accuracy Projectors for Tomographic Reconstruction From Few Projections.

    PubMed

    Momey, Fabien; Denis, Loïc; Burnier, Catherine; Thiébaut, Éric; Becker, Jean-Marie; Desbat, Laurent

    2015-12-01

    Tomographic iterative reconstruction methods need a very thorough modeling of data. This point becomes critical when the number of available projections is limited. At the core of this issue is the projector design, i.e., the numerical model relating the representation of the object of interest to the projections on the detector. Voxel driven and ray driven projection models are widely used for their short execution time in spite of their coarse approximations. Distance driven model has an improved accuracy but makes strong approximations to project voxel basis functions. Cubic voxel basis functions are anisotropic, accurately modeling their projection is, therefore, computationally expensive. Both smoother and more isotropic basis functions better represent the continuous functions and provide simpler projectors. These considerations have led to the development of spherically symmetric volume elements, called blobs. Set apart their isotropy, blobs are often considered too computationally expensive in practice. In this paper, we consider using separable B-splines as basis functions to represent the object, and we propose to approximate the projection of these basis functions by a 2D separable model. When the degree of the B-splines increases, their isotropy improves and projections can be computed regardless of their orientation. The degree and the sampling of the B-splines can be chosen according to a tradeoff between approximation quality and computational complexity. We quantitatively measure the good accuracy of our model and compare it with other projectors, such as the distance-driven and the model proposed by Long et al. From the numerical experiments, we demonstrate that our projector with an improved accuracy better preserves the quality of the reconstruction as the number of projections decreases. Our projector with cubic B-splines requires about twice as many operations as a model based on voxel basis functions. Higher accuracy projectors can be used to

  15. Elastic body spline technique for feature point generation and face modeling.

    PubMed

    Kuo, Chung J; Hung, Jui-Hsin; Tsai, Meng-Han; Shih, Po-Liang

    2005-12-01

    Due to the advent of MPEG-4 standard, facial animation has been receiving significant attention lately. A common approach for facial animation is to use the mesh model. The physics-based transformation, elastic body spline (EBS), has been proposed to deform the facial mesh model and generate realistic expression by assuming the whole facial image has the same elastic property. In this paper, we partition facial images into different regions and propose an iterative algorithm to find the elastic property of each facial region. By doing so, we can obtain the EBS for mesh vertices in the facial mesh model such that facial animation can be more realistically achieved. PMID:16370468

  16. Simulating the focusing of light onto 1D nanostructures with a B-spline modal method

    NASA Astrophysics Data System (ADS)

    Bouchon, P.; Chevalier, P.; Héron, S.; Pardo, F.; Pelouard, J.-L.; Haïdar, R.

    2015-03-01

    Focusing the light onto nanostructures thanks to spherical lenses is a first step to enhance the field, and is widely used in applications, in particular for enhancing non-linear effects like the second harmonic generation. Nonetheless, the electromagnetic response of such nanostructures, which have subwavelength patterns, to a focused beam can not be described by the simple ray tracing formalism. Here, we present a method to compute the response to a focused beam, based on the B-spline modal method. The simulation of a gaussian focused beam is obtained thanks to a truncated decomposition on plane waves computed on a single period, which limits the computation burden.

  17. Numerical solution of the controlled Duffing oscillator by semi-orthogonal spline wavelets

    NASA Astrophysics Data System (ADS)

    Lakestani, M.; Razzaghi, M.; Dehghan, M.

    2006-09-01

    This paper presents a numerical method for solving the controlled Duffing oscillator. The method can be extended to nonlinear calculus of variations and optimal control problems. The method is based upon compactly supported linear semi-orthogonal B-spline wavelets. The differential and integral expressions which arise in the system dynamics, the performance index and the boundary conditions are converted into some algebraic equations which can be solved for the unknown coefficients. Illustrative examples are included to demonstrate the validity and applicability of the technique.

  18. Power spectral density estimation by spline smoothing in the frequency domain

    NASA Technical Reports Server (NTRS)

    Defigueiredo, R. J. P.; Thompson, J. R.

    1972-01-01

    An approach, based on a global averaging procedure, is presented for estimating the power spectrum of a second order stationary zero-mean ergodic stochastic process from a finite length record. This estimate is derived by smoothing, with a cubic smoothing spline, the naive estimate of the spectrum obtained by applying FFT techniques to the raw data. By means of digital computer simulated results, a comparison is made between the features of the present approach and those of more classical techniques of spectral estimation.

  19. Power spectral density estimation by spline smoothing in the frequency domain.

    NASA Technical Reports Server (NTRS)

    De Figueiredo, R. J. P.; Thompson, J. R.

    1972-01-01

    An approach, based on a global averaging procedure, is presented for estimating the power spectrum of a second order stationary zero-mean ergodic stochastic process from a finite length record. This estimate is derived by smoothing, with a cubic smoothing spline, the naive estimate of the spectrum obtained by applying Fast Fourier Transform techniques to the raw data. By means of digital computer simulated results, a comparison is made between the features of the present approach and those of more classical techniques of spectral estimation.-

  20. A counterexample concerning the L_2 -projector onto linear spline spaces

    NASA Astrophysics Data System (ADS)

    Oswald, Peter

    2008-03-01

    For the L_2 -orthogonal projection P_V onto spaces of linear splines over simplicial partitions in polyhedral domains in mathbb{R}^d , d>1 , we show that in contrast to the one-dimensional case, where Vert P_VVert _{L_inftyto L_infty} le 3 independently of the nature of the partition, in higher dimensions the L_infty -norm of P_V cannot be bounded uniformly with respect to the partition. This fact is folklore among specialists in finite element methods and approximation theory but seemingly has never been formally proved.

  1. A sequential method for spline approximation with variable knots. [recursive piecewise polynomial signal processing

    NASA Technical Reports Server (NTRS)

    Mier Muth, A. M.; Willsky, A. S.

    1978-01-01

    In this paper we describe a method for approximating a waveform by a spline. The method is quite efficient, as the data are processed sequentially. The basis of the approach is to view the approximation problem as a question of estimation of a polynomial in noise, with the possibility of abrupt changes in the highest derivative. This allows us to bring several powerful statistical signal processing tools into play. We also present some initial results on the application of our technique to the processing of electrocardiograms, where the knot locations themselves may be some of the most important pieces of diagnostic information.

  2. Spline function approximation techniques for image geometric distortion representation. [for registration of multitemporal remote sensor imagery

    NASA Technical Reports Server (NTRS)

    Anuta, P. E.

    1975-01-01

    Least squares approximation techniques were developed for use in computer aided correction of spatial image distortions for registration of multitemporal remote sensor imagery. Polynomials were first used to define image distortion over the entire two dimensional image space. Spline functions were then investigated to determine if the combination of lower order polynomials could approximate a higher order distortion with less computational difficulty. Algorithms for generating approximating functions were developed and applied to the description of image distortion in aircraft multispectral scanner imagery. Other applications of the techniques were suggested for earth resources data processing areas other than geometric distortion representation.

  3. Precision Efficacy Analysis for Regression.

    ERIC Educational Resources Information Center

    Brooks, Gordon P.

    When multiple linear regression is used to develop a prediction model, sample size must be large enough to ensure stable coefficients. If the derivation sample size is inadequate, the model may not predict well for future subjects. The precision efficacy analysis for regression (PEAR) method uses a cross- validity approach to select sample sizes…

  4. Ecological Regression and Voting Rights.

    ERIC Educational Resources Information Center

    Freedman, David A.; And Others

    1991-01-01

    The use of ecological regression in voting rights cases is discussed in the context of a lawsuit against Los Angeles County (California) in 1990. Ecological regression assumes that systematic voting differences between precincts are explained by ethnic differences. An alternative neighborhood model is shown to lead to different conclusions. (SLD)

  5. Logistic Regression: Concept and Application

    ERIC Educational Resources Information Center

    Cokluk, Omay

    2010-01-01

    The main focus of logistic regression analysis is classification of individuals in different groups. The aim of the present study is to explain basic concepts and processes of binary logistic regression analysis intended to determine the combination of independent variables which best explain the membership in certain groups called dichotomous…

  6. Fungible weights in logistic regression.

    PubMed

    Jones, Jeff A; Waller, Niels G

    2016-06-01

    In this article we develop methods for assessing parameter sensitivity in logistic regression models. To set the stage for this work, we first review Waller's (2008) equations for computing fungible weights in linear regression. Next, we describe 2 methods for computing fungible weights in logistic regression. To demonstrate the utility of these methods, we compute fungible logistic regression weights using data from the Centers for Disease Control and Prevention's (2010) Youth Risk Behavior Surveillance Survey, and we illustrate how these alternate weights can be used to evaluate parameter sensitivity. To make our work accessible to the research community, we provide R code (R Core Team, 2015) that will generate both kinds of fungible logistic regression weights. (PsycINFO Database Record PMID:26651981

  7. [Regression grading in gastrointestinal tumors].

    PubMed

    Tischoff, I; Tannapfel, A

    2012-02-01

    Preoperative neoadjuvant chemoradiation therapy is a well-established and essential part of the interdisciplinary treatment of gastrointestinal tumors. Neoadjuvant treatment leads to regressive changes in tumors. To evaluate the histological tumor response different scoring systems describing regressive changes are used and known as tumor regression grading. Tumor regression grading is usually based on the presence of residual vital tumor cells in proportion to the total tumor size. Currently, no nationally or internationally accepted grading systems exist. In general, common guidelines should be used in the pathohistological diagnostics of tumors after neoadjuvant therapy. In particularly, the standard tumor grading will be replaced by tumor regression grading. Furthermore, tumors after neoadjuvant treatment are marked with the prefix "y" in the TNM classification. PMID:22293790

  8. Regression approaches in the test-negative study design for assessment of influenza vaccine effectiveness.

    PubMed

    Bond, H S; Sullivan, S G; Cowling, B J

    2016-06-01

    Influenza vaccination is the most practical means available for preventing influenza virus infection and is widely used in many countries. Because vaccine components and circulating strains frequently change, it is important to continually monitor vaccine effectiveness (VE). The test-negative design is frequently used to estimate VE. In this design, patients meeting the same clinical case definition are recruited and tested for influenza; those who test positive are the cases and those who test negative form the comparison group. When determining VE in these studies, the typical approach has been to use logistic regression, adjusting for potential confounders. Because vaccine coverage and influenza incidence change throughout the season, time is included among these confounders. While most studies use unconditional logistic regression, adjusting for time, an alternative approach is to use conditional logistic regression, matching on time. Here, we used simulation data to examine the potential for both regression approaches to permit accurate and robust estimates of VE. In situations where vaccine coverage changed during the influenza season, the conditional model and unconditional models adjusting for categorical week and using a spline function for week provided more accurate estimates. We illustrated the two approaches on data from a test-negative study of influenza VE against hospitalization in children in Hong Kong which resulted in the conditional logistic regression model providing the best fit to the data. PMID:26732691

  9. Flexible estimation of covariance function by penalized spline with application to longitudinal family data

    PubMed Central

    Wang, Yuanjia

    2011-01-01

    Longitudinal data are routinely collected in biomedical research studies. A natural model describing longitudinal data decomposes an individual’s outcome as the sum of a population mean function and random subject-specific deviations. When parametric assumptions are too restrictive, methods modeling the population mean function and the random subject-specific functions nonparametrically are in demand. In some applications, it is desirable to estimate a covariance function of random subject-specific deviations. In this work, flexible yet computationally efficient methods are developed for a general class of semiparametric mixed effects models, where the functional forms of the population mean and the subject-specific curves are unspecified. We estimate nonparametric components of the model by penalized spline (P-spline, [1]), and reparametrize the random curve covariance function by a modified Cholesky decomposition [2] which allows for unconstrained estimation of a positive semidefinite matrix. To provide smooth estimates, we penalize roughness of fitted curves and derive closed form solutions in the maximization step of an EM algorithm. In addition, we present models and methods for longitudinal family data where subjects in a family are correlated and we decompose the covariance function into a subject-level source and observation-level source. We apply these methods to the multi-level Framingham Heart Study data to estimate age-specific heritability of systolic blood pressure (SBP) nonparametrically. PMID:21491474

  10. Change detection of lung cancer using image registration and thin-plate spline warping

    NASA Astrophysics Data System (ADS)

    Almasslawi, Dawood M. S.; Kabir, Ehsanollah

    2011-06-01

    Lung cancer has the lowest survival rate comparing to other types of cancer and determination of the patient's cancer stage is the most vital issue regarding the cancer treatment process. In most cases accurate estimation of the cancer stage is not easy to achieve. The changes in the size of the primary tumor can be detected using image registration techniques. The registration method proposed in this paper uses Normalized Mutual Information metric and Thin-Plate Spline transformation function for the accurate determination of the correspondence between series of the lung cancer Computed Tomography images. The Normalized Mutual Information is used as a metric for the rigid registration of the images to better estimate the global motion of the tissues and the Thin Plate Spline is used to deform the image in a locally supported manner. The Control Points needed for the transformation are extracted semiautomatically. This new approach in change detection of the lung cancer is implemented using the Insight Toolkit. The results from implementing this method on the CT images of 8 patients provided a satisfactory quality for change detection of the lung cancer.

  11. A novel monocular visual navigation method for cotton-picking robot based on horizontal spline segmentation

    NASA Astrophysics Data System (ADS)

    Xu, ShengYong; Wu, JuanJuan; Zhu, Li; Li, WeiHao; Wang, YiTian; Wang, Na

    2015-12-01

    Visual navigation is a fundamental technique of intelligent cotton-picking robot. There are many components and cover in the cotton field, which make difficulties of furrow recognition and trajectory extraction. In this paper, a new field navigation path extraction method is presented. Firstly, the color image in RGB color space is pre-processed by the OTSU threshold algorithm and noise filtering. Secondly, the binary image is divided into numerous horizontally spline areas. In each area connected regions of neighboring images' vertical center line are calculated by the Two-Pass algorithm. The center points of the connected regions are candidate points for navigation path. Thirdly, a series of navigation points are determined iteratively on the principle of the nearest distance between two candidate points in neighboring splines. Finally, the navigation path equation is fitted by the navigation points using the least squares method. Experiments prove that this method is accurate and effective. It is suitable for visual navigation in the complex environment of cotton field in different phases.

  12. Turbine engine lubricant foaming due to silicone basestock used in non-specification spline lubricant

    SciTech Connect

    Centers, P.W.

    1995-05-01

    Dependent upon molecular weight and distribution, concentration, temperature, air flow, and test details or field application, polydimethylsiloxane (PDMS) may be neutral, profoamant or antifoamant in polyolesters. This understanding was critical in the solution of a turbine engine lubrication system foaming problem occurring at several military locations. Suspect turbine engine-accessory gearbox assembly materials gathered from several sites were evaluated. One non-specification PDMS-based spline lubricant caused copious foaming of the lubricant at less than ten parts-per-million concentration, while a specification polymethyl-phenylsiloxane (PMPS)-based lubricant required a concentration nearly 2000 times greater to generate equivalent foam. Use of the profoamant PDMS spline lubricant was then prohibited. Since prohibition, foaming of turbine engine lubricants used in the particular application has not been reported. PMPS impact on foaming of ester lubricants is similar to a much more viscous PDMS attributed to the reduced interaction of PMPS in esters due to pendant phenyl structure of PMPS absent in PDMS. These data provide significant additional insight and methodology to investigate foaming tendencies of partially miscible silicone-ester and other fluid systems. 7 refs., 2 figs., 1 tab.

  13. Fuzzy B-spline optimization for urban slum three-dimensional reconstruction using ENVISAT satellite data

    NASA Astrophysics Data System (ADS)

    Marghany, Maged

    2014-06-01

    A critical challenges in urban aeras is slums. In fact, they are considered a source of crime and disease due to poor-quality housing, unsanitary conditions, poor infrastructures and occupancy security. The poor in the dense urban slums are the most vulnerable to infection due to (i) inadequate and restricted access to safety, drinking water and sufficient quantities of water for personal hygiene; (ii) the lack of removal and treatment of excreta; and (iii) the lack of removal of solid waste. This study aims to investigate the capability of ENVISAT ASAR satellite and Google Earth data for three-dimensional (3-D) slum urban reconstruction in developed countries such as Egypt. The main objective of this work is to utilize some 3-D automatic detection algorithm for urban slum in ENVISAT ASAR and Google Erath images were acquired in Cairo, Egypt using Fuzzy B-spline algorithm. The results show that the fuzzy algorithm is the best indicator for chaotic urban slum as it can discriminate between them from its surrounding environment. The combination of Fuzzy and B-spline then used to reconstruct 3-D of urban slum. The results show that urban slums, road network, and infrastructures are perfectly discriminated. It can therefore be concluded that the fuzzy algorithm is an appropriate algorithm for chaotic urban slum automatic detection in ENVSIAT ASAR and Google Earth data.

  14. NURBS- and T-spline-based isogeometric cohesive zone modeling of interface debonding

    NASA Astrophysics Data System (ADS)

    Dimitri, R.; De Lorenzis, L.; Wriggers, P.; Zavarise, G.

    2014-08-01

    Cohesive zone (CZ) models have long been used by the scientific community to analyze the progressive damage of materials and interfaces. In these models, non-linear relationships between tractions and relative displacements are assumed, which dictate both the work of separation per unit fracture surface and the peak stress that has to be reached for the crack formation. This contribution deals with isogeometric CZ modeling of interface debonding. The interface is discretized with generalized contact elements which account for both contact and cohesive debonding within a unified framework. The formulation is suitable for non-matching discretizations of the interacting surfaces in presence of large deformations and large relative displacements. The isogeometric discretizations are based on non uniform rational B-splines as well as analysis-suitable T-splines enabling local refinement. Conventional Lagrange polynomial discretizations are also used for comparison purposes. Some numerical examples demonstrate that the proposed formulation based on isogeometric analysis is a computationally accurate and efficient technology to solve challenging interface debonding problems in 2D and 3D.

  15. DBSR_HF: A B-spline Dirac-Hartree-Fock program

    NASA Astrophysics Data System (ADS)

    Zatsarinny, Oleg; Froese Fischer, Charlotte

    2016-05-01

    A B-spline version of a general Dirac-Hartree-Fock program is described. The usual differential equations are replaced by a set of generalized eigenvalue problems of the form (Ha -εa B) Pa = 0, where Ha and B are the Hamiltonian and overlap matrices, respectively, and Pa is the two-component relativistic orbit in the B-spline basis. A default universal grid allows for flexible adjustment to different nuclear models. When two orthogonal orbitals are both varied, the energy must also be stationary with respect to orthonormal transformations. At such a stationary point the off-diagonal Lagrange multipliers may be eliminated through projection operators. The self-consistent field procedure exhibits excellent convergence. Several atomic states can be considered simultaneously, including some configuration-interaction calculations. The program provides several options for the treatment of Breit interaction and QED corrections. The information about atoms up to Z = 104 is stored by the program. Along with a simple interface through command-line arguments, this information allows the user to run the program with minimal initial preparations.

  16. Railroad inspection based on ACFM employing a non-uniform B-spline approach

    NASA Astrophysics Data System (ADS)

    Chacón Muñoz, J. M.; García Márquez, F. P.; Papaelias, M.

    2013-11-01

    The stresses sustained by rails have increased in recent years due to the use of higher train speeds and heavier axle loads. For this reason surface and near-surface defects generate by Rolling Contact Fatigue (RCF) have become particularly significant as they can cause unexpected structural failure of the rail, resulting in severe derailments. The accident that took place in Hatfield, UK (2000), is an example of a derailment caused by the structural failure of a rail section due to RCF. Early detection of RCF rail defects is therefore of paramount importance to the rail industry. The performance of existing ultrasonic and magnetic flux leakage techniques in detecting rail surface-breaking defects, such as head checks and gauge corner cracking, is inadequate during high-speed inspection, while eddy current sensors suffer from lift-off effects. The results obtained through rail inspection experiments under simulated conditions using Alternating Current Field Measurement (ACFM) probes, suggest that this technique can be applied for the accurate and reliable detection of surface-breaking defects at high inspection speeds. This paper presents the B-Spline approach used for the accurate filtering the noise of the raw ACFM signal obtained during high speed tests to improve the reliability of the measurements. A non-uniform B-spline approximation is employed to calculate the exact positions and the dimensions of the defects. This method generates a smooth approximation similar to the ACFM dataset points related to the rail surface-breaking defect.

  17. Defining window-boundaries for genomic analyses using smoothing spline techniques

    SciTech Connect

    Beissinger, Timothy M.; Rosa, Guilherme J.M.; Kaeppler, Shawn M.; Gianola, Daniel; de Leon, Natalia

    2015-04-17

    High-density genomic data is often analyzed by combining information over windows of adjacent markers. Interpretation of data grouped in windows versus at individual locations may increase statistical power, simplify computation, reduce sampling noise, and reduce the total number of tests performed. However, use of adjacent marker information can result in over- or under-smoothing, undesirable window boundary specifications, or highly correlated test statistics. We introduce a method for defining windows based on statistically guided breakpoints in the data, as a foundation for the analysis of multiple adjacent data points. This method involves first fitting a cubic smoothing spline to the data and then identifying the inflection points of the fitted spline, which serve as the boundaries of adjacent windows. This technique does not require prior knowledge of linkage disequilibrium, and therefore can be applied to data collected from individual or pooled sequencing experiments. Moreover, in contrast to existing methods, an arbitrary choice of window size is not necessary, since these are determined empirically and allowed to vary along the genome.

  18. Defining window-boundaries for genomic analyses using smoothing spline techniques

    DOE PAGESBeta

    Beissinger, Timothy M.; Rosa, Guilherme J.M.; Kaeppler, Shawn M.; Gianola, Daniel; de Leon, Natalia

    2015-04-17

    High-density genomic data is often analyzed by combining information over windows of adjacent markers. Interpretation of data grouped in windows versus at individual locations may increase statistical power, simplify computation, reduce sampling noise, and reduce the total number of tests performed. However, use of adjacent marker information can result in over- or under-smoothing, undesirable window boundary specifications, or highly correlated test statistics. We introduce a method for defining windows based on statistically guided breakpoints in the data, as a foundation for the analysis of multiple adjacent data points. This method involves first fitting a cubic smoothing spline to the datamore » and then identifying the inflection points of the fitted spline, which serve as the boundaries of adjacent windows. This technique does not require prior knowledge of linkage disequilibrium, and therefore can be applied to data collected from individual or pooled sequencing experiments. Moreover, in contrast to existing methods, an arbitrary choice of window size is not necessary, since these are determined empirically and allowed to vary along the genome.« less

  19. RGB color calibration for quantitative image analysis: the "3D thin-plate spline" warping approach.

    PubMed

    Menesatti, Paolo; Angelini, Claudio; Pallottino, Federico; Antonucci, Francesca; Aguzzi, Jacopo; Costa, Corrado

    2012-01-01

    In the last years the need to numerically define color by its coordinates in n-dimensional space has increased strongly. Colorimetric calibration is fundamental in food processing and other biological disciplines to quantitatively compare samples' color during workflow with many devices. Several software programmes are available to perform standardized colorimetric procedures, but they are often too imprecise for scientific purposes. In this study, we applied the Thin-Plate Spline interpolation algorithm to calibrate colours in sRGB space (the corresponding Matlab code is reported in the Appendix). This was compared with other two approaches. The first is based on a commercial calibration system (ProfileMaker) and the second on a Partial Least Square analysis. Moreover, to explore device variability and resolution two different cameras were adopted and for each sensor, three consecutive pictures were acquired under four different light conditions. According to our results, the Thin-Plate Spline approach reported a very high efficiency of calibration allowing the possibility to create a revolution in the in-field applicative context of colour quantification not only in food sciences, but also in other biological disciplines. These results are of great importance for scientific color evaluation when lighting conditions are not controlled. Moreover, it allows the use of low cost instruments while still returning scientifically sound quantitative data. PMID:22969337

  20. Applications of B-spline Methodology to Three-Dimensional Simulations of Flow over a Cylinder

    NASA Astrophysics Data System (ADS)

    Kravchenko, Arthur; Moin, Parviz; Shariff, Karim

    1997-11-01

    A numerical method based on B-splines(A.G. Kravchenko, P. Moin, R. Moser, J. Comp. Phys.), 127, 412-423 (1996) is generalized for turbulence simulations on zonal grids in curvilinear coordinates. The performance of the method is assessed in three-dimensional simulations of a flow over a circular cylinder. Numerical simulations at Re=300 show good agreement with the corresponding spectral calculations. Coefficient of drag and Strouhal shedding frequency agree well with the experimental data for this flow. Large eddy simulations at the subcritical Reynolds number, Re=3900, are performed and compared with previous upwind-biased and central finite-difference computations. In the near-wake, all three simulations are in excellent agreement with each other and agree fairly well with the experimental data of Lourenco and Shih. In the far-wake, the results obtained from the B-spline computations are in better agreement with the experimental data of Ong and Wallace than those obtained in upwind and central finite-difference simulations. The influence of numerical resolution and the spanwise domain size on the three-dimensional simulations will be discussed.

  1. A new numerical method of finding potentiometric titration end-points by use of rational spline functions.

    PubMed

    Ren, K; Ren-Kurc, A

    1986-08-01

    A new numerical method of determining the position of the inflection point of a potentiometric titration curve is presented. It consists of describing the experimental data (emf, volume data-points) by means of a rational spline function. The co-ordinates of the titration end-point are determined by analysis of the first and second derivatives of the spline function formed. The method also allows analysis of distorted titration curves which cannot be interpreted by Gran's or other computational methods. PMID:18964159

  2. Extended cubic B-spline method for solving a linear system of second-order boundary value problems.

    PubMed

    Heilat, Ahmed Salem; Hamid, Nur Nadiah Abd; Ismail, Ahmad Izani Md

    2016-01-01

    A method based on extended cubic B-spline is proposed to solve a linear system of second-order boundary value problems. In this method, two free parameters, [Formula: see text] and [Formula: see text], play an important role in producing accurate results. Optimization of these parameters are carried out and the truncation error is calculated. This method is tested on three examples. The examples suggest that this method produces comparable or more accurate results than cubic B-spline and some other methods. PMID:27547688

  3. An investigation of angular stiffness and damping coefficients of an axial spline coupling in high-speed rotating machinery

    NASA Technical Reports Server (NTRS)

    Ku, C.-P. Roger; Walton, James F., Jr.; Lund, Jorgen W.

    1994-01-01

    This paper provided an opportunity to quantify the angular stiffness and equivalent viscous damping coefficients of an axial spline coupling used in high-speed turbomachinery. A unique test methodology and data reduction procedures were developed. The bending moments and angular deflections transmitted across an axial spline coupling were measured while a nonrotating shaft was excited by an external shaker. A rotor dynamics computer program was used to simulate the test conditions and to correlate the angular stiffness and damping coefficients. In addition, sensitivity analyses were performed to show that the accuracy of the dynamic coefficients do not rely on the accuracy of the data reduction procedures.

  4. A new background subtraction method for energy dispersive X-ray fluorescence spectra using a cubic spline interpolation

    NASA Astrophysics Data System (ADS)

    Yi, Longtao; Liu, Zhiguo; Wang, Kai; Chen, Man; Peng, Shiqi; Zhao, Weigang; He, Jialin; Zhao, Guangcui

    2015-03-01

    A new method is presented to subtract the background from the energy dispersive X-ray fluorescence (EDXRF) spectrum using a cubic spline interpolation. To accurately obtain interpolation nodes, a smooth fitting and a set of discriminant formulations were adopted. From these interpolation nodes, the background is estimated by a calculated cubic spline function. The method has been tested on spectra measured from a coin and an oil painting using a confocal MXRF setup. In addition, the method has been tested on an existing sample spectrum. The result confirms that the method can properly subtract the background.

  5. Practical Session: Simple Linear Regression

    NASA Astrophysics Data System (ADS)

    Clausel, M.; Grégoire, G.

    2014-12-01

    Two exercises are proposed to illustrate the simple linear regression. The first one is based on the famous Galton's data set on heredity. We use the lm R command and get coefficients estimates, standard error of the error, R2, residuals …In the second example, devoted to data related to the vapor tension of mercury, we fit a simple linear regression, predict values, and anticipate on multiple linear regression. This pratical session is an excerpt from practical exercises proposed by A. Dalalyan at EPNC (see Exercises 1 and 2 of http://certis.enpc.fr/~dalalyan/Download/TP_ENPC_4.pdf).

  6. Abstract Expression Grammar Symbolic Regression

    NASA Astrophysics Data System (ADS)

    Korns, Michael F.

    This chapter examines the use of Abstract Expression Grammars to perform the entire Symbolic Regression process without the use of Genetic Programming per se. The techniques explored produce a symbolic regression engine which has absolutely no bloat, which allows total user control of the search space and output formulas, which is faster, and more accurate than the engines produced in our previous papers using Genetic Programming. The genome is an all vector structure with four chromosomes plus additional epigenetic and constraint vectors, allowing total user control of the search space and the final output formulas. A combination of specialized compiler techniques, genetic algorithms, particle swarm, aged layered populations, plus discrete and continuous differential evolution are used to produce an improved symbolic regression sytem. Nine base test cases, from the literature, are used to test the improvement in speed and accuracy. The improved results indicate that these techniques move us a big step closer toward future industrial strength symbolic regression systems.

  7. Multiple Regression and Its Discontents

    ERIC Educational Resources Information Center

    Snell, Joel C.; Marsh, Mitchell

    2012-01-01

    Multiple regression is part of a larger statistical strategy originated by Gauss. The authors raise questions about the theory and suggest some changes that would make room for Mandelbrot and Serendipity.

  8. Basis Selection for Wavelet Regression

    NASA Technical Reports Server (NTRS)

    Wheeler, Kevin R.; Lau, Sonie (Technical Monitor)

    1998-01-01

    A wavelet basis selection procedure is presented for wavelet regression. Both the basis and the threshold are selected using cross-validation. The method includes the capability of incorporating prior knowledge on the smoothness (or shape of the basis functions) into the basis selection procedure. The results of the method are demonstrated on sampled functions widely used in the wavelet regression literature. The results of the method are contrasted with other published methods.

  9. Regression methods for spatial data

    NASA Technical Reports Server (NTRS)

    Yakowitz, S. J.; Szidarovszky, F.

    1982-01-01

    The kriging approach, a parametric regression method used by hydrologists and mining engineers, among others also provides an error estimate the integral of the regression function. The kriging method is explored and some of its statistical characteristics are described. The Watson method and theory are extended so that the kriging features are displayed. Theoretical and computational comparisons of the kriging and Watson approaches are offered.

  10. Wrong Signs in Regression Coefficients

    NASA Technical Reports Server (NTRS)

    McGee, Holly

    1999-01-01

    When using parametric cost estimation, it is important to note the possibility of the regression coefficients having the wrong sign. A wrong sign is defined as a sign on the regression coefficient opposite to the researcher's intuition and experience. Some possible causes for the wrong sign discussed in this paper are a small range of x's, leverage points, missing variables, multicollinearity, and computational error. Additionally, techniques for determining the cause of the wrong sign are given.

  11. An adaptive MR-CT registration method for MRI-guided prostate cancer radiotherapy

    NASA Astrophysics Data System (ADS)

    Zhong, Hualiang; Wen, Ning; Gordon, James J.; Elshaikh, Mohamed A.; Movsas, Benjamin; Chetty, Indrin J.

    2015-04-01

    Magnetic Resonance images (MRI) have superior soft tissue contrast compared with CT images. Therefore, MRI might be a better imaging modality to differentiate the prostate from surrounding normal organs. Methods to accurately register MRI to simulation CT images are essential, as we transition the use of MRI into the routine clinic setting. In this study, we present a finite element method (FEM) to improve the performance of a commercially available, B-spline-based registration algorithm in the prostate region. Specifically, prostate contours were delineated independently on ten MRI and CT images using the Eclipse treatment planning system. Each pair of MRI and CT images was registered with the B-spline-based algorithm implemented in the VelocityAI system. A bounding box that contains the prostate volume in the CT image was selected and partitioned into a tetrahedral mesh. An adaptive finite element method was then developed to adjust the displacement vector fields (DVFs) of the B-spline-based registrations within the box. The B-spline and FEM-based registrations were evaluated based on the variations of prostate volume and tumor centroid, the unbalanced energy of the generated DVFs, and the clarity of the reconstructed anatomical structures. The results showed that the volumes of the prostate contours warped with the B-spline-based DVFs changed 10.2% on average, relative to the volumes of the prostate contours on the original MR images. This discrepancy was reduced to 1.5% for the FEM-based DVFs. The average unbalanced energy was 2.65 and 0.38 mJ cm-3, and the prostate centroid deviation was 0.37 and 0.28 cm, for the B-spline and FEM-based registrations, respectively. Different from the B-spline-warped MR images, the FEM-warped MR images have clear boundaries between prostates and bladders, and their internal prostatic structures are consistent with those of the original MR images. In summary, the developed adaptive FEM method preserves the prostate volume

  12. Embedded Sensors for Measuring Surface Regression

    NASA Technical Reports Server (NTRS)

    Gramer, Daniel J.; Taagen, Thomas J.; Vermaak, Anton G.

    2006-01-01

    The development and evaluation of new hybrid and solid rocket motors requires accurate characterization of the propellant surface regression as a function of key operational parameters. These characteristics establish the propellant flow rate and are prime design drivers affecting the propulsion system geometry, size, and overall performance. There is a similar need for the development of advanced ablative materials, and the use of conventional ablatives exposed to new operational environments. The Miniature Surface Regression Sensor (MSRS) was developed to serve these applications. It is designed to be cast or embedded in the material of interest and regresses along with it. During this process, the resistance of the sensor is related to its instantaneous length, allowing the real-time thickness of the host material to be established. The time derivative of this data reveals the instantaneous surface regression rate. The MSRS could also be adapted to perform similar measurements for a variety of other host materials when it is desired to monitor thicknesses and/or regression rate for purposes of safety, operational control, or research. For example, the sensor could be used to monitor the thicknesses of brake linings or racecar tires and indicate when they need to be replaced. At the time of this reporting, over 200 of these sensors have been installed into a variety of host materials. An MSRS can be made in either of two configurations, denoted ladder and continuous (see Figure 1). A ladder MSRS includes two highly electrically conductive legs, across which narrow strips of electrically resistive material are placed at small increments of length. These strips resemble the rungs of a ladder and are electrically equivalent to many tiny resistors connected in parallel. A substrate material provides structural support for the legs and rungs. The instantaneous sensor resistance is read by an external signal conditioner via wires attached to the conductive legs on the

  13. Adaptive Multilinear Tensor Product Wavelets.

    PubMed

    Weiss, Kenneth; Lindstrom, Peter

    2016-01-01

    Many foundational visualization techniques including isosurfacing, direct volume rendering and texture mapping rely on piecewise multilinear interpolation over the cells of a mesh. However, there has not been much focus within the visualization community on techniques that efficiently generate and encode globally continuous functions defined by the union of multilinear cells. Wavelets provide a rich context for analyzing and processing complicated datasets. In this paper, we exploit adaptive regular refinement as a means of representing and evaluating functions described by a subset of their nonzero wavelet coefficients. We analyze the dependencies involved in the wavelet transform and describe how to generate and represent the coarsest adaptive mesh with nodal function values such that the inverse wavelet transform is exactly reproduced via simple interpolation (subdivision) over the mesh elements. This allows for an adaptive, sparse representation of the function with on-demand evaluation at any point in the domain. We focus on the popular wavelets formed by tensor products of linear B-splines, resulting in an adaptive, nonconforming but crack-free quadtree (2D) or octree (3D) mesh that allows reproducing globally continuous functions via multilinear interpolation over its cells. PMID:26529742

  14. Spline analysis of Holocene sediment magnetic records: Uncertainty estimates for field modeling

    NASA Astrophysics Data System (ADS)

    Panovska, S.; Finlay, C. C.; Donadini, F.; Hirt, A. M.

    2012-02-01

    Sediment and archeomagnetic data spanning the Holocene enable us to reconstruct the evolution of the geomagnetic field on time scales of centuries to millennia. In global field modeling the reliability of data is taken into account by weighting according to uncertainty estimates. Uncertainties in sediment magnetic records arise from (1) imperfections in the paleomagnetic recording processes, (2) coring and (sub) sampling methods, (3) adopted averaging procedures, and (4) uncertainties in the age-depth models. We take a step toward improved uncertainty estimates by performing a comprehensive statistical analysis of the available global database of Holocene magnetic records. Smoothing spline models that capture the robust aspects of individual records are derived. This involves a cross-validation approach, based on an absolute deviation measure of misfit, to determine the smoothing parameter for each spline model, together with the use of a minimum smoothing time derived from the sedimentation rate and assumed lock-in depth. Departures from the spline models provide information concerning the random variability in each record. Temporal resolution analysis reveals that 50% of the records have smoothing times between 80 and 250 years. We also perform comparisons among the sediment magnetic records and archeomagnetic data, as well as with predictions from the global historical and archeomagnetic field models. Combining these approaches, we arrive at individual uncertainty estimates for each sediment record. These range from 2.5° to 11.2° (median: 5.9°; interquartile range: 5.4° to 7.2°) for inclination, 4.1° to 46.9° (median: 13.4°; interquartile range: 11.4° to 18.9°) for relative declination, and 0.59 to 1.32 (median: 0.93; interquartile range: 0.86 to 1.01) for standardized relative paleointensity. These values suggest that uncertainties may have been underestimated in previous studies. No compelling evidence for systematic inclination shallowing is

  15. MUlti-Dimensional Spline-Based Estimator (MUSE) for Motion Estimation: Algorithm Development and Initial Results

    PubMed Central

    Viola, Francesco; Coe, Ryan L.; Owen, Kevin; Guenther, Drake A.; Walker, William F.

    2008-01-01

    Image registration and motion estimation play central roles in many fields, including RADAR, SONAR, light microscopy, and medical imaging. Because of its central significance, estimator accuracy, precision, and computational cost are of critical importance. We have previously presented a highly accurate, spline-based time delay estimator that directly determines sub-sample time delay estimates from sampled data. The algorithm uses cubic splines to produce a continuous representation of a reference signal and then computes an analytical matching function between this reference and a delayed signal. The location of the minima of this function yields estimates of the time delay. In this paper we describe the MUlti-dimensional Spline-based Estimator (MUSE) that allows accurate and precise estimation of multidimensional displacements/strain components from multidimensional data sets. We describe the mathematical formulation for two- and three-dimensional motion/strain estimation and present simulation results to assess the intrinsic bias and standard deviation of this algorithm and compare it to currently available multi-dimensional estimators. In 1000 noise-free simulations of ultrasound data we found that 2D MUSE exhibits maximum bias of 2.6 × 10−4 samples in range and 2.2 × 10−3 samples in azimuth (corresponding to 4.8 and 297 nm, respectively). The maximum simulated standard deviation of estimates in both dimensions was comparable at roughly 2.8 × 10−3 samples (corresponding to 54 nm axially and 378 nm laterally). These results are between two and three orders of magnitude better than currently used 2D tracking methods. Simulation of performance in 3D yielded similar results to those observed in 2D. We also present experimental results obtained using 2D MUSE on data acquired by an Ultrasonix Sonix RP imaging system with an L14-5/38 linear array transducer operating at 6.6 MHz. While our validation of the algorithm was performed using ultrasound data, MUSE

  16. Optimal Duration of Daily Antituberculosis Therapy before Switching to DOTS Intermittent Therapy to Reduce Mortality in HIV Infected Patients: A Duration-Response Analysis Using Restricted Cubic Splines

    PubMed Central

    Pakam, Raghavakalyan; Midde, Manoranjan; Naik, Praveen Kumar

    2014-01-01

    Compared with thrice-weekly intermittent antituberculosis therapy (ATT), the use of daily ATT during the intensive phase has shown improved survival in HIV infected patients with tuberculosis. However, the optimal duration of daily ATT before initiating intermittent ATT is not well known. In this study, we analysed the mortality of HIV-related tuberculosis according to the duration of daily ATT before switching to thrice-weekly ATT in patients who completed at least two months of treatment in an HIV cohort study. Statistical analysis was performed using Cox proportional hazard models. To relax the linearity assumption in regression models and to allow for a flexible interpretation of the relationship between duration of daily ATT and mortality, continuous variables were modelled using restricted cubic splines. The study included 520 HIV infected patients with tuberculosis and 8,724.3 person-months of follow-up. The multivariable analysis showed that the mortality risk was inversely correlated with the duration of daily ATT before switching to intermittent therapy during the first 30 days of ATT but, after approximately 30 days of treatment, differences were not statistically significant. The results of this study suggest that daily ATT should be given for at least 30 days before switching to intermittent ATT in HIV infected patients with tuberculosis.

  17. First Principles Calculations of the Double Photoionization ofAtoms and Molecules using B-splines and Exterior Complex Scaling

    SciTech Connect

    Martin, Fernando; Horner, Daniel A.; Vanroose, Wim; Rescigno,Thomas N.; McCurdy, C. William

    2005-11-04

    We report a fully ab initio implementation of exterior complex scaling in B-splines to evaluate total, singly and triply differential cross sections in double photoionization problems. Results for He and H{sub 2} double photoionization are presented and compared with experiment.

  18. ESTIMATES OF GENETIC PARAMETERS FOR FIRST LACTATION TEST-DAY YIELDS OF HOLSTEIN COWS WITH A CUBIC SPLINE MODEL

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The objective was to estimate genetic parameters for individual test-day milk, fat, and protein yields with a cubic spline model. A total of 196,687 test-day records in the first 305-d of 38,172 first lactation Holstein cows that calved between 1994 and early 1999 were obtained from Dairy Records Ma...

  19. Quiet Clean Short-Haul Experimental Engine (QCSEE) ball spline pitch-change mechanism whirligig test report

    NASA Technical Reports Server (NTRS)

    1978-01-01

    The component testing of a ball spline variable pitch mechanism is described including a whirligig test. The variable pitch actuator successfully completed all planned whirligig tests including a fifty cycle endurance test at actuation rates up to 125 deg per second at up to 102 percent fan speed (3400 rpm).

  20. Recursive bias estimation for high dimensional regression smoothers

    SciTech Connect

    Hengartner, Nicolas W; Cornillon, Pierre - Andre; Matzner - Lober, Eric

    2009-01-01

    In multivariate nonparametric analysis, sparseness of the covariates also called curse of dimensionality, forces one to use large smoothing parameters. This leads to biased smoother. Instead of focusing on optimally selecting the smoothing parameter, we fix it to some reasonably large value to ensure an over-smoothing of the data. The resulting smoother has a small variance but a substantial bias. In this paper, we propose to iteratively correct of the bias initial estimator by an estimate of the latter obtained by smoothing the residuals. We examine in details the convergence of the iterated procedure for classical smoothers and relate our procedure to L{sub 2}-Boosting, For multivariate thin plate spline smoother, we proved that our procedure adapts to the correct and unknown order of smoothness for estimating an unknown function m belonging to H({nu}) (Sobolev space where m should be bigger than d/2). We apply our method to simulated and real data and show that our method compares favorably with existing procedures.

  1. Local Convexity-Preserving C2 Rational Cubic Spline for Convex Data

    PubMed Central

    Abd Majid, Ahmad; Ali, Jamaludin Md.

    2014-01-01

    We present the smooth and visually pleasant display of 2D data when it is convex, which is contribution towards the improvements over existing methods. This improvement can be used to get the more accurate results. An attempt has been made in order to develop the local convexity-preserving interpolant for convex data using C2 rational cubic spline. It involves three families of shape parameters in its representation. Data dependent sufficient constraints are imposed on single shape parameter to conserve the inherited shape feature of data. Remaining two of these shape parameters are used for the modification of convex curve to get a visually pleasing curve according to industrial demand. The scheme is tested through several numerical examples, showing that the scheme is local, computationally economical, and visually pleasing. PMID:24757421

  2. FAST TRACK COMMUNICATION: From cardinal spline wavelet bases to highly coherent dictionaries

    NASA Astrophysics Data System (ADS)

    Andrle, Miroslav; Rebollo-Neira, Laura

    2008-05-01

    Wavelet families arise by scaling and translations of a prototype function, called the mother wavelet. The construction of wavelet bases for cardinal spline spaces is generally carried out within the multi-resolution analysis scheme. Thus, the usual way of increasing the dimension of the multi-resolution subspaces is by augmenting the scaling factor. We show here that, when working on a compact interval, the identical effect can be achieved without changing the wavelet scale but reducing the translation parameter. By such a procedure we generate a redundant frame, called a dictionary, spanning the same spaces as a wavelet basis but with wavelets of broader support. We characterize the correlation of the dictionary elements by measuring their 'coherence' and produce examples illustrating the relevance of highly coherent dictionaries to problems of sparse signal representation.

  3. History matching by spline approximation and regularization in single-phase areal reservoirs

    NASA Technical Reports Server (NTRS)

    Lee, T. Y.; Kravaris, C.; Seinfeld, J.

    1986-01-01

    An automatic history matching algorithm is developed based on bi-cubic spline approximations of permeability and porosity distributions and on the theory of regularization to estimate permeability or porosity in a single-phase, two-dimensional real reservoir from well pressure data. The regularization feature of the algorithm is used to convert the ill-posed history matching problem into a well-posed problem. The algorithm employs the conjugate gradient method as its core minimization method. A number of numerical experiments are carried out to evaluate the performance of the algorithm. Comparisons with conventional (non-regularized) automatic history matching algorithms indicate the superiority of the new algorithm with respect to the parameter estimates obtained. A quasioptimal regularization parameter is determined without requiring a priori information on the statistical properties of the observations.

  4. An Automatic Method for Nucleus Boundary Segmentation Based on a Closed Cubic Spline

    PubMed Central

    Feng, Zhao; Li, Anan; Gong, Hui; Luo, Qingming

    2016-01-01

    The recognition of brain nuclei is the basis for localizing brain functions. Traditional histological research, represented by atlas illustration, achieves the goal of nucleus boundary recognition by manual delineation, but it has become increasingly difficult to extend this handmade method to delineating brain regions and nuclei from large datasets acquired by the recently developed single-cell-resolution imaging techniques for the whole brain. Here, we propose a method based on a closed cubic spline (CCS), which can automatically segment the boundaries of nuclei that differ to a relatively high degree in cell density from the surrounding areas and has been validated on model images and Nissl-stained microimages of mouse brain. It may even be extended to the segmentation of target outlines on MRI or CT images. The proposed method for the automatic extraction of nucleus boundaries would greatly accelerate the illustration of high-resolution brain atlases. PMID:27378903

  5. SpLiNeS: automatic analysis of ecographic movies of flow-mediated dilation

    NASA Astrophysics Data System (ADS)

    Bartoli, Guido; Menegaz, Gloria; Dragoni, Saverio; Gori, Tommaso

    2007-03-01

    In this paper, we propose a fully automatic system for analyzing ecographic movies of flow-mediated dilation. Our approach uses a spline-based active contour (deformable template) to follow artery boundaries during the FMD procedure. A number of preprocessing steps (grayscale conversion, contrast enhancing, sharpening) are used to improve the visual quality of frames coming from the echographic acquisition. Our system can be used in real-time environments due to the high speed of edge recognition which iteratively minimizes fitting errors on endothelium boundaries. We also implemented a fully functional GUI which permits to interactively follow the whole recognition process as well as to reshape the results. The system accuracy and reproducibility has been validated with extensive in vivo experiments.

  6. An Efficient Operator for the Change Point Estimation in Partial Spline Model

    PubMed Central

    Han, Sung Won; Zhong, Hua; Putt, Mary

    2015-01-01

    In bio-informatics application, the estimation of the starting and ending points of drop-down in the longitudinal data is important. One possible approach to estimate such change times is to use the partial spline model with change points. In order to use estimate change time, the minimum operator in terms of a smoothing parameter has been widely used, but we showed that the minimum operator causes large MSE of change point estimates. In this paper, we proposed the summation operator in terms of a smoothing parameter, and our simulation study showed that the summation operator gives smaller MSE for estimated change points than the minimum one. We also applied the proposed approach to the experiment data, blood flow during photodynamic cancer therapy. PMID:25705072

  7. A numerical solution of the linear Boltzmann equation using cubic B-splines

    NASA Astrophysics Data System (ADS)

    Khurana, Saheba; Thachuk, Mark

    2012-03-01

    A numerical method using cubic B-splines is presented for solving the linear Boltzmann equation. The collision kernel for the system is chosen as the Wigner-Wilkins kernel. A total of three different representations for the distribution function are presented. Eigenvalues and eigenfunctions of the collision matrix are obtained for various mass ratios and compared with known values. Distribution functions, along with first and second moments, are evaluated for different mass and temperature ratios. Overall it is shown that the method is accurate and well behaved. In particular, moments can be predicted with very few points if the representation is chosen well. This method produces sparse matrices, can be easily generalized to higher dimensions, and can be cast into efficient parallel algorithms.

  8. Non-rigid registration of multiphoton microscopy images using B-splines

    NASA Astrophysics Data System (ADS)

    Lorenz, Kevin S.; Salama, Paul; Dunn, Kenneth W.; Delp, Edward J.

    2011-03-01

    Optical microscopy poses many challenges for digital image analysis. One particular challenge includes correction of image artifacts due to respiratory motion from specimens imaged in vivo. We describe a non-rigid registration method using B-splines to correct these motion artifacts. Current attempts at non-rigid medical image registration have typically involved only a single pair of images. Extending these techniques to an entire series of images, possibly comprising hundreds of images, is presented in this paper. Our method involves creating a uniform grid of control points across each image in a stack. Each control point is manipulated by optimizing a cost function consisting of two parts: a term to determine image similarity, and a term to evaluate deformation grid smoothness. This process is repeated for all images in the stack. Analysis is evaluated using block motion estimation and other visualization techniques.

  9. A finite element cable model and its applications based on the cubic spline curve

    NASA Astrophysics Data System (ADS)

    Fang, Zi-fan; He, Qing-song; Xiang, Bing-fei; Xiao, Hua-pan; He, Kong-de; Du, Yi-xian

    2013-10-01

    For accurate prediction of the deformation of cable in the towed system, a new finite element model is presented that provides a representation of both the bending and torsional effects. In this paper, the cubic spline interpolation function is applied as the trial solution. By using a weighted residual approach, the discretized motion equations for the new finite element model are developed. The model is calculated with the computation program complier by Matlab. Several numerical examples are presented to illustrate the numerical schemes. The results of numerical simulation are stable and valid, and consistent with the mechanical properties of the cable. The model can be applied to kinematics analysis and the design of ocean cable, such as mooring lines, towing, and ROV umbilical cables.

  10. An accurate spline polynomial cubature formula for double integration with logarithmic singularity

    NASA Astrophysics Data System (ADS)

    Bichi, Sirajo Lawan; Eshkuvatov, Z. K.; Long, N. M. A. Nik; Bello, M. Y.

    2016-06-01

    The paper studied the integration of logarithmic singularity problem J (y ¯)= ∬ ∇ζ (y ¯)l o g |y ¯-y¯0*|d A , where y ¯=(α ,β ), y¯0=(α0,β0) the domain ∇ is rectangle ∇ = [r1, r2] × [r3, r4], the arbitrary point y ¯∈∇ and the fixed point y¯0∈∇. The given density function ζ(y ¯), is smooth on the rectangular domain ∇ and is in the functions class C2,τ (∇). Cubature formula (CF) for double integration with logarithmic singularities (LS) on a rectangle ∇ is constructed by applying type (0, 2) modified spline function DΓ(P). The results obtained by testing the density functions ζ(y ¯) as linear and absolute value functions shows that the constructed CF is highly accurate.

  11. COLLINARUS: collection of image-derived non-linear attributes for registration using splines

    NASA Astrophysics Data System (ADS)

    Chappelow, Jonathan; Bloch, B. Nicolas; Rofsky, Neil; Genega, Elizabeth; Lenkinski, Robert; DeWolf, William; Viswanath, Satish; Madabhushi, Anant

    2009-02-01

    We present a new method for fully automatic non-rigid registration of multimodal imagery, including structural and functional data, that utilizes multiple texutral feature images to drive an automated spline based non-linear image registration procedure. Multimodal image registration is significantly more complicated than registration of images from the same modality or protocol on account of difficulty in quantifying similarity between different structural and functional information, and also due to possible physical deformations resulting from the data acquisition process. The COFEMI technique for feature ensemble selection and combination has been previously demonstrated to improve rigid registration performance over intensity-based MI for images of dissimilar modalities with visible intensity artifacts. Hence, we present here the natural extension of feature ensembles for driving automated non-rigid image registration in our new technique termed Collection of Image-derived Non-linear Attributes for Registration Using Splines (COLLINARUS). Qualitative and quantitative evaluation of the COLLINARUS scheme is performed on several sets of real multimodal prostate images and synthetic multiprotocol brain images. Multimodal (histology and MRI) prostate image registration is performed for 6 clinical data sets comprising a total of 21 groups of in vivo structural (T2-w) MRI, functional dynamic contrast enhanced (DCE) MRI, and ex vivo WMH images with cancer present. Our method determines a non-linear transformation to align WMH with the high resolution in vivo T2-w MRI, followed by mapping of the histopathologic cancer extent onto the T2-w MRI. The cancer extent is then mapped from T2-w MRI onto DCE-MRI using the combined non-rigid and affine transformations determined by the registration. Evaluation of prostate registration is performed by comparison with the 3 time point (3TP) representation of functional DCE data, which provides an independent estimate of cancer

  12. Ionospheric scintillation modeling for high- and mid-latitude using B-spline technique

    NASA Astrophysics Data System (ADS)

    Priyadarshi, S.

    2015-09-01

    Ionospheric scintillation is a significant component of space-weather studies and serves as an estimate for the level of perturbation in the satellite radio wave signal caused due to small-scale ionospheric irregularities. B-spline functions are used on the GPS ground based data collected during the year 2007-2012 for modeling high- and mid-latitude ionospheric scintillation. Proposed model is for Hornsund, Svalbard and Warsaw, Poland. The input data used in this model were recorded by GSV 4004b receivers. For validation, results of this model are compared with the observation and other existing models. Physical behavior of the ionospheric scintillation during different seasons and geomagnetic conditions are discussed well. Model is found in good coherence with the ionospheric scintillation theory as well as to the accepted scintillation mechanism for high- and mid-latitude.

  13. A geometric modeler based on a dual-geometry representation polyhedra and rational b-splines

    NASA Technical Reports Server (NTRS)

    Klosterman, A. L.

    1984-01-01

    For speed and data base reasons, solid geometric modeling of large complex practical systems is usually approximated by a polyhedra representation. Precise parametric surface and implicit algebraic modelers are available but it is not yet practical to model the same level of system complexity with these precise modelers. In response to this contrast the GEOMOD geometric modeling system was built so that a polyhedra abstraction of the geometry would be available for interactive modeling without losing the precise definition of the geometry. Part of the reason that polyhedra modelers are effective is that all bounded surfaces can be represented in a single canonical format (i.e., sets of planar polygons). This permits a very simple and compact data structure. Nonuniform rational B-splines are currently the best representation to describe a very large class of geometry precisely with one canonical format. The specific capabilities of the modeler are described.

  14. Full-turn symplectic map from a generator in a Fourier-spline basis

    SciTech Connect

    Berg, J.S.; Warnock, R.L.; Ruth, R.D.; Forest, E.

    1993-04-01

    Given an arbitrary symplectic tracking code, one can construct a full-turn symplectic map that approximates the result of the code to high accuracy. The map is defined implicitly by a mixed-variable generating function. The implicit definition is no great drawback in practice, thanks to an efficient use of Newton`s method to solve for the explicit map at each iteration. The generator is represented by a Fourier series in angle variables, with coefficients given as B-spline functions of action variables. It is constructed by using results of single-turn tracking from many initial conditions. The method has been appliedto a realistic model of the SSC in three degrees of freedom. Orbits can be mapped symplectically for 10{sup 7} turns on an IBM RS6000 model 320 workstation, in a run of about one day.

  15. An ADI extrapolated Crank-Nicolson orthogonal spline collocation method for nonlinear reaction-diffusion systems

    NASA Astrophysics Data System (ADS)

    Fernandes, Ryan I.; Fairweather, Graeme

    2012-08-01

    An alternating direction implicit (ADI) orthogonal spline collocation (OSC) method is described for the approximate solution of a class of nonlinear reaction-diffusion systems. Its efficacy is demonstrated on the solution of well-known examples of such systems, specifically the Brusselator, Gray-Scott, Gierer-Meinhardt and Schnakenberg models, and comparisons are made with other numerical techniques considered in the literature. The new ADI method is based on an extrapolated Crank-Nicolson OSC method and is algebraically linear. It is efficient, requiring at each time level only O(N) operations where N is the number of unknowns. Moreover, it is shown to produce approximations which are of optimal global accuracy in various norms, and to possess superconvergence properties.

  16. A Quadratic Spline based Interface (QUASI) reconstruction algorithm for accurate tracking of two-phase flows

    NASA Astrophysics Data System (ADS)

    Diwakar, S. V.; Das, Sarit K.; Sundararajan, T.

    2009-12-01

    A new Quadratic Spline based Interface (QUASI) reconstruction algorithm is presented which provides an accurate and continuous representation of the interface in a multiphase domain and facilitates the direct estimation of local interfacial curvature. The fluid interface in each of the mixed cells is represented by piecewise parabolic curves and an initial discontinuous PLIC approximation of the interface is progressively converted into a smooth quadratic spline made of these parabolic curves. The conversion is achieved by a sequence of predictor-corrector operations enforcing function ( C0) and derivative ( C1) continuity at the cell boundaries using simple analytical expressions for the continuity requirements. The efficacy and accuracy of the current algorithm has been demonstrated using standard test cases involving reconstruction of known static interface shapes and dynamically evolving interfaces in prescribed flow situations. These benchmark studies illustrate that the present algorithm performs excellently as compared to the other interface reconstruction methods available in literature. Quadratic rate of error reduction with respect to grid size has been observed in all the cases with curved interface shapes; only in situations where the interface geometry is primarily flat, the rate of convergence becomes linear with the mesh size. The flow algorithm implemented in the current work is designed to accurately balance the pressure gradients with the surface tension force at any location. As a consequence, it is able to minimize spurious flow currents arising from imperfect normal stress balance at the interface. This has been demonstrated through the standard test problem of an inviscid droplet placed in a quiescent medium. Finally, the direct curvature estimation ability of the current algorithm is illustrated through the coupled multiphase flow problem of a deformable air bubble rising through a column of water.

  17. Cubic Spline Collocation Method for the Simulation of Turbulent Thermal Convection in Compressible Fluids

    SciTech Connect

    Castillo, V M

    2005-01-12

    A collocation method using cubic splines is developed and applied to simulate steady and time-dependent, including turbulent, thermally convecting flows for two-dimensional compressible fluids. The state variables and the fluxes of the conserved quantities are approximated by cubic splines in both space direction. This method is shown to be numerically conservative and to have a local truncation error proportional to the fourth power of the grid spacing. A ''dual-staggered'' Cartesian grid, where energy and momentum are updated on one grid and mass density on the other, is used to discretize the flux form of the compressible Navier-Stokes equations. Each grid-line is staggered so that the fluxes, in each direction, are calculated at the grid midpoints. This numerical method is validated by simulating thermally convecting flows, from steady to turbulent, reproducing known results. Once validated, the method is used to investigate many aspects of thermal convection with high numerical accuracy. Simulations demonstrate that multiple steady solutions can coexist at the same Rayleigh number for compressible convection. As a system is driven further from equilibrium, a drop in the time-averaged dimensionless heat flux (and the dimensionless internal entropy production rate) occurs at the transition from laminar-periodic to chaotic flow. This observation is consistent with experiments of real convecting fluids. Near this transition, both harmonic and chaotic solutions may exist for the same Rayleigh number. The chaotic flow loses phase-space information at a greater rate, while the periodic flow transports heat (produces entropy) more effectively. A linear sum of the dimensionless forms of these rates connects the two flow morphologies over the entire range for which they coexist. For simulations of systems with higher Rayleigh numbers, a scaling relation exists relating the dimensionless heat flux to the two-seventh's power of the Rayleigh number, suggesting the

  18. Using Spline Functions for the Shape Description of the Surface of Shell Structures

    NASA Astrophysics Data System (ADS)

    Lenda, Grzegorz

    2014-12-01

    The assessment of the cover shape of shell structures makes an important issue both from the point of view of safety, as well as functionality of the construction. The most numerous group among this type of constructions are objects having the shape of a quadric (cooling towers, tanks with gas and liquids, radio-telescope dishes etc.). The material from observation of these objects (point sets), collected during periodic measurements is usually converted into a continuous form in the process of approximation, with the use of the quadric surface. The created models, are then applied in the assessment of the deformation of surface in the given period of time. Such a procedure has, however, some significant limitations. The approximation with the use of quadrics, allows the determination of basic dimensions and location of the construction, however it results in ideal objects, not providing any information on local surface deformations. They can only be defined by comparison of the model with the point set of observations. If the periodic measurements are carried out in independent, separate points, then it will be impossible to define the existing deformations directly. The second problem results from the one-equation character of the ideal approximation model. Real deformations of the object change its basic parameters, inter alia the lengths of half-axis of main quadrics. The third problem appears when the construction is not a quadric; no information on the equation describing its shape is available either. Accepting wrong kind of approximation function, causes the creation of a model of large deviations from the observed points. All the mentioned above inconveniences can be avoided by applying splines to the shape description of the surface of shell structures. The use of the function of this type, however, comes across other types of limitations. This study deals with the above subject, presenting several methods allowing the increase of accuracy and decrease of

  19. Interpretation of Standardized Regression Coefficients in Multiple Regression.

    ERIC Educational Resources Information Center

    Thayer, Jerome D.

    The extent to which standardized regression coefficients (beta values) can be used to determine the importance of a variable in an equation was explored. The beta value and the part correlation coefficient--also called the semi-partial correlation coefficient and reported in squared form as the incremental "r squared"--were compared for variables…

  20. Interquantile Shrinkage in Regression Models

    PubMed Central

    Jiang, Liewen; Wang, Huixia Judy; Bondell, Howard D.

    2012-01-01

    Conventional analysis using quantile regression typically focuses on fitting the regression model at different quantiles separately. However, in situations where the quantile coefficients share some common feature, joint modeling of multiple quantiles to accommodate the commonality often leads to more efficient estimation. One example of common features is that a predictor may have a constant effect over one region of quantile levels but varying effects in other regions. To automatically perform estimation and detection of the interquantile commonality, we develop two penalization methods. When the quantile slope coefficients indeed do not change across quantile levels, the proposed methods will shrink the slopes towards constant and thus improve the estimation efficiency. We establish the oracle properties of the two proposed penalization methods. Through numerical investigations, we demonstrate that the proposed methods lead to estimations with competitive or higher efficiency than the standard quantile regression estimation in finite samples. Supplemental materials for the article are available online. PMID:24363546

  1. Survival Data and Regression Models

    NASA Astrophysics Data System (ADS)

    Grégoire, G.

    2014-12-01

    We start this chapter by introducing some basic elements for the analysis of censored survival data. Then we focus on right censored data and develop two types of regression models. The first one concerns the so-called accelerated failure time models (AFT), which are parametric models where a function of a parameter depends linearly on the covariables. The second one is a semiparametric model, where the covariables enter in a multiplicative form in the expression of the hazard rate function. The main statistical tool for analysing these regression models is the maximum likelihood methodology and, in spite we recall some essential results about the ML theory, we refer to the chapter "Logistic Regression" for a more detailed presentation.

  2. Nonrigid registration with free-form deformation model of multilevel uniform cubic B-splines: application to image registration and distortion correction of spectral image cubes.

    PubMed

    Eckhard, Timo; Eckhard, Jia; Valero, Eva M; Nieves, Juan Luis

    2014-06-10

    In spectral imaging, spatial and spectral information of an image scene are combined. There exist several technologies that allow the acquisition of this kind of data. Depending on the optical components used in the spectral imaging systems, misalignment between image channels can occur. Further, the projection of some systems deviates from that of a perfect optical lens system enough that a distortion of scene content in the images becomes apparent to the observer. Correcting distortion and misalignment can be complicated for spectral image data if they are different at each image channel. In this work, we propose an image registration and distortion correction scheme for spectral image cubes that is based on a free-form deformation model of uniform cubic B-splines with multilevel grid refinement. This scheme is adaptive with respect to image size, degree of misalignment, and degree of distortion, and in that sense is superior to previous approaches. We support our proposed scheme with empirical data from a Bragg-grating-based hyperspectral imager, for which a registration accuracy of approximately one pixel was achieved. PMID:24921143

  3. Cactus: An Introduction to Regression

    ERIC Educational Resources Information Center

    Hyde, Hartley

    2008-01-01

    When the author first used "VisiCalc," the author thought it a very useful tool when he had the formulas. But how could he design a spreadsheet if there was no known formula for the quantities he was trying to predict? A few months later, the author relates he learned to use multiple linear regression software and suddenly it all clicked into…

  4. Regression modelling of Dst index

    NASA Astrophysics Data System (ADS)

    Parnowski, Aleksei

    We developed a new approach to the problem of real-time space weather indices forecasting using readily available data from ACE and a number of ground stations. It is based on the regression modelling method [1-3], which combines the benefits of empirical and statistical approaches. Mathematically it is based upon the partial regression analysis and Monte Carlo simulations to deduce the empirical relationships in the system. The typical elapsed time per forecast is a few seconds on an average PC. This technique can be easily extended to other indices like AE and Kp. The proposed system can also be useful for investigating physical phenomena related to interactions between the solar wind and the magnetosphere -it already helped uncovering two new geoeffective parameters. 1. Parnowski A.S. Regression modeling method of space weather prediction // Astrophysics Space Science. — 2009. — V. 323, 2. — P. 169-180. doi:10.1007/s10509-009-0060-4 [arXiv:0906.3271] 2. Parnovskiy A.S. Regression Modeling and its Application to the Problem of Prediction of Space Weather // Journal of Automation and Information Sciences. — 2009. — V. 41, 5. — P. 61-69. doi:10.1615/JAutomatInfScien.v41.i5.70 3. Parnowski A.S. Statistically predicting Dst without satellite data // Earth, Planets and Space. — 2009. — V. 61, 5. — P. 621-624.

  5. Fungible Weights in Multiple Regression

    ERIC Educational Resources Information Center

    Waller, Niels G.

    2008-01-01

    Every set of alternate weights (i.e., nonleast squares weights) in a multiple regression analysis with three or more predictors is associated with an infinite class of weights. All members of a given class can be deemed "fungible" because they yield identical "SSE" (sum of squared errors) and R[superscript 2] values. Equations for generating…

  6. Spontaneous regression of breast cancer.

    PubMed

    Lewison, E F

    1976-11-01

    The dramatic but rare regression of a verified case of breast cancer in the absence of adequate, accepted, or conventional treatment has been observed and documented by clinicians over the course of many years. In my practice limited to diseases of the breast, over the past 25 years I have observed 12 patients with a unique and unusual clinical course valid enough to be regarded as spontaneous regression of breast cancer. These 12 patients, with clinically confirmed breast cancer, had temporary arrest or partial remission of their disease in the absence of complete or adequate treatment. In most of these cases, spontaneous regression could not be equated ultimately with permanent cure. Three of these case histories are summarized, and patient characteristics of pertinent clinical interest in the remaining case histories are presented and discussed. Despite widespread doubt and skepticism, there is ample clinical evidence to confirm the fact that spontaneous regression of breast cancer is a rare phenomenon but is real and does occur. PMID:799758

  7. Regression Models of Atlas Appearance

    PubMed Central

    Rohlfing, Torsten; Sullivan, Edith V.; Pfefferbaum, Adolf

    2010-01-01

    Models of object appearance based on principal components analysis provide powerful and versatile tools in computer vision and medical image analysis. A major shortcoming is that they rely entirely on the training data to extract principal modes of appearance variation and ignore underlying variables (e.g., subject age, gender). This paper introduces an appearance modeling framework based instead on generalized multi-linear regression. The training of regression appearance models is controlled by independent variables. This makes it straightforward to create model instances for specific values of these variables, which is akin to model interpolation. We demonstrate the new framework by creating an appearance model of the human brain from MR images of 36 subjects. Instances of the model created for different ages are compared with average shape atlases created from age-matched sub-populations. Relative tissue volumes vs. age in models are also compared with tissue volumes vs. subject age in the original images. In both experiments, we found excellent agreement between the regression models and the comparison data. We conclude that regression appearance models are a promising new technique for image analysis, with one potential application being the representation of a continuum of mutually consistent, age-specific atlases of the human brain. PMID:19694260

  8. Correlation Weights in Multiple Regression

    ERIC Educational Resources Information Center

    Waller, Niels G.; Jones, Jeff A.

    2010-01-01

    A general theory on the use of correlation weights in linear prediction has yet to be proposed. In this paper we take initial steps in developing such a theory by describing the conditions under which correlation weights perform well in population regression models. Using OLS weights as a comparison, we define cases in which the two weighting…

  9. Quantile Regression with Censored Data

    ERIC Educational Resources Information Center

    Lin, Guixian

    2009-01-01

    The Cox proportional hazards model and the accelerated failure time model are frequently used in survival data analysis. They are powerful, yet have limitation due to their model assumptions. Quantile regression offers a semiparametric approach to model data with possible heterogeneity. It is particularly powerful for censored responses, where the…

  10. Regression models of atlas appearance.

    PubMed

    Rohlfing, Torsten; Sullivan, Edith V; Pfefferbaum, Adolf

    2009-01-01

    Models of object appearance based on principal components analysis provide powerful and versatile tools in computer vision and medical image analysis. A major shortcoming is that they rely entirely on the training data to extract principal modes of appearance variation and ignore underlying variables (e.g., subject age, gender). This paper introduces an appearance modeling framework based instead on generalized multi-linear regression. The training of regression appearance models is controlled by independent variables. This makes it straightforward to create model instances for specific values of these variables, which is akin to model interpolation. We demonstrate the new framework by creating an appearance model of the human brain from MR images of 36 subjects. Instances of the model created for different ages are compared with average shape atlases created from age-matched sub-populations. Relative tissue volumes vs. age in models are also compared with tissue volumes vs. subject age in the original images. In both experiments, we found excellent agreement between the regression models and the comparison data. We conclude that regression appearance models are a promising new technique for image analysis, with one potential application being the representation of a continuum of mutually consistent, age-specific atlases of the human brain. PMID:19694260

  11. Ridge Regression for Interactive Models.

    ERIC Educational Resources Information Center

    Tate, Richard L.

    1988-01-01

    An exploratory study of the value of ridge regression for interactive models is reported. Assuming that the linear terms in a simple interactive model are centered to eliminate non-essential multicollinearity, a variety of common models, representing both ordinal and disordinal interactions, are shown to have "orientations" that are favorable to…

  12. Spline-based Rayleigh-Ritz methods for the approximation of the natural modes of vibration for flexible beams with tip bodies

    NASA Technical Reports Server (NTRS)

    Rosen, I. G.

    1986-01-01

    Rayleigh-Ritz methods for the approximation of the natural modes for a class of vibration problems involving flexible beams with tip bodies using subspaces of piecewise polynomial spline functions are developed. An abstract operator-theoretic formulation of the eigenvalue problem is derived and spectral properties investigated. The existing theory for spline-based Rayleigh-Ritz methods applied to elliptic differential operators and the approximation properties of interpolatory splines are used to argue convergence and establish rates of convergence. An example and numerical results are discussed.

  13. Spline-based Rayleigh-Ritz methods for the approximation of the natural modes of vibration for flexible beams with tip bodies

    NASA Technical Reports Server (NTRS)

    Rosen, I. G.

    1985-01-01

    Rayleigh-Ritz methods for the approximation of the natural modes for a class of vibration problems involving flexible beams with tip bodies using subspaces of piecewise polynomial spline functions are developed. An abstract operator theoretic formulation of the eigenvalue problem is derived and spectral properties investigated. The existing theory for spline-based Rayleigh-Ritz methods applied to elliptic differential operators and the approximation properties of interpolatory splines are useed to argue convergence and establish rates of convergence. An example and numerical results are discussed.

  14. Regression Verification Using Impact Summaries

    NASA Technical Reports Server (NTRS)

    Backes, John; Person, Suzette J.; Rungta, Neha; Thachuk, Oksana

    2013-01-01

    Regression verification techniques are used to prove equivalence of syntactically similar programs. Checking equivalence of large programs, however, can be computationally expensive. Existing regression verification techniques rely on abstraction and decomposition techniques to reduce the computational effort of checking equivalence of the entire program. These techniques are sound but not complete. In this work, we propose a novel approach to improve scalability of regression verification by classifying the program behaviors generated during symbolic execution as either impacted or unimpacted. Our technique uses a combination of static analysis and symbolic execution to generate summaries of impacted program behaviors. The impact summaries are then checked for equivalence using an o-the-shelf decision procedure. We prove that our approach is both sound and complete for sequential programs, with respect to the depth bound of symbolic execution. Our evaluation on a set of sequential C artifacts shows that reducing the size of the summaries can help reduce the cost of software equivalence checking. Various reduction, abstraction, and compositional techniques have been developed to help scale software verification techniques to industrial-sized systems. Although such techniques have greatly increased the size and complexity of systems that can be checked, analysis of large software systems remains costly. Regression analysis techniques, e.g., regression testing [16], regression model checking [22], and regression verification [19], restrict the scope of the analysis by leveraging the differences between program versions. These techniques are based on the idea that if code is checked early in development, then subsequent versions can be checked against a prior (checked) version, leveraging the results of the previous analysis to reduce analysis cost of the current version. Regression verification addresses the problem of proving equivalence of closely related program

  15. Regression analysis of networked data

    PubMed Central

    Zhou, Yan; Song, Peter X.-K.

    2016-01-01

    This paper concerns regression methodology for assessing relationships between multi-dimensional response variables and covariates that are correlated within a network. To address analytical challenges associated with the integration of network topology into the regression analysis, we propose a hybrid quadratic inference method that uses both prior and data-driven correlations among network nodes. A Godambe information-based tuning strategy is developed to allocate weights between the prior and data-driven network structures, so the estimator is efficient. The proposed method is conceptually simple and computationally fast, and has appealing large-sample properties. It is evaluated by simulation, and its application is illustrated using neuroimaging data from an association study of the effects of iron deficiency on auditory recognition memory in infants. PMID:27279658

  16. Observational Studies: Matching or Regression?

    PubMed

    Brazauskas, Ruta; Logan, Brent R

    2016-03-01

    In observational studies with an aim of assessing treatment effect or comparing groups of patients, several approaches could be used. Often, baseline characteristics of patients may be imbalanced between groups, and adjustments are needed to account for this. It can be accomplished either via appropriate regression modeling or, alternatively, by conducting a matched pairs study. The latter is often chosen because it makes groups appear to be comparable. In this article we considered these 2 options in terms of their ability to detect a treatment effect in time-to-event studies. Our investigation shows that a Cox regression model applied to the entire cohort is often a more powerful tool in detecting treatment effect as compared with a matched study. Real data from a hematopoietic cell transplantation study is used as an example. PMID:26712591

  17. B-spline methods and zonal grids for numerical simulations of turbulent flows

    NASA Astrophysics Data System (ADS)

    Kravchenko, Arthur Grigorievich

    1998-12-01

    A novel numerical technique is developed for simulations of complex turbulent flows on zonal embedded grids. This technique is based on the Galerkin method with basis functions constructed using B-splines. The technique permits fine meshes to be embedded in physically significant flow regions without placing a large number of grid points in the rest of the computational domain. The numerical technique has been tested successfully in simulations of a fully developed turbulent channel flow. Large eddy simulations of turbulent channel flow at Reynolds numbers up to Rec = 110,000 (based on centerline velocity and channel half-width) show good agreement with the existing experimental data. These tests indicate that the method provides an efficient information transfer between zones without accumulation of errors in the regions of sudden grid changes. The numerical solutions on multi-zone grids are of the same accuracy as those on a single-zone grid but require less computer resources. The performance of the numerical method in a generalized coordinate system is assessed in simulations of laminar flows over a circular cylinder at low Reynolds numbers and three-dimensional simulations at ReD = 300 (based on free-stream velocity and cylinder diameter). The drag coefficients, the size of the recirculation region, and the vortex shedding frequency all agree well with the experimental data and previous simulations of these flows. Large eddy simulations of a flow over a circular cylinder at a sub-critical Reynolds number, ReD = 3900, are performed and compared with previous upwind-biased and central finite-difference computations. In the very near-wake, all three simulations are in agreement with each other and agree fairly well with the PIV experimental data of Lourenco & Shih (1993). Farther downstream, the results of the B- spline computations are in better agreement with the hot- wire experiment of Ong & Wallace (1996) than those obtained in finite-difference simulations

  18. Comparisons of Wilson-Fowler and Parametric Cubic Splines with the Curve-Fitting Algorithms of Several Computer-Aided Design Systems

    SciTech Connect

    Birchler, W.D.; Schilling, S.A.

    2001-02-01

    The purpose of this report is to demonstrate that modern computer-aided design (CAD), computer-aided manufacturing (CAM), and computer-aided engineering (CAE) systems can be used in the Department of Energy (DOE) Nuclear Weapons Complex (NWC) to design new and remodel old products, fabricate old and new parts, and reproduce legacy data within the inspection uncertainty limits. In this study, two two-dimensional splines are compared with several modern CAD curve-fitting modeling algorithms. The first curve-fitting algorithm is called the Wilson-Fowler Spline (WFS), and the second is called a parametric cubic spline (PCS). Modern CAD systems usually utilize either parametric cubic and/or B-splines.

  19. The importance of scale for spatial-confounding bias and precision of spatial regression estimators

    PubMed Central

    Paciorek, Christopher J

    2010-01-01

    Residuals in regression models are often spatially correlated. Prominent examples include studies in environmental epidemiology to understand the chronic health effects of pollutants. I consider the effects of residual spatial structure on the bias and precision of regression coefficients, developing a simple framework in which to understand the key issues and derive informative analytic results. When unmeasured confounding introduces spatial structure into the residuals, regression models with spatial random effects and closely-related models such as kriging and penalized splines are biased, even when the residual variance components are known. Analytic and simulation results show how the bias depends on the spatial scales of the covariate and the residual: one can reduce bias by fitting a spatial model only when there is variation in the covariate at a scale smaller than the scale of the unmeasured confounding. I also discuss how the scales of the residual and the covariate affect efficiency and uncertainty estimation when the residuals are independent of the covariate. In an application on the association between black carbon particulate matter air pollution and birth weight, controlling for large-scale spatial variation appears to reduce bias from unmeasured confounders, while increasing uncertainty in the estimated pollution effect. PMID:21528104

  20. Modified cubic B-spline differential quadrature method for numerical solution of three-dimensional coupled viscous Burger equation

    NASA Astrophysics Data System (ADS)

    Shukla, H. S.; Tamsir, Mohammad; Srivastava, Vineet K.; Rashidi, Mohammad Mehdi

    2016-04-01

    In this paper, we propose a modified cubic B-spline differential quadrature method (MCB-DQM) to solve three-dimensional (3D) coupled viscous Burger equation with appropriate initial and boundary conditions. In this method, modified cubic B-spline is treated as a basis function in the differential quadrature method (DQM) to compute the weighting coefficients. In this way, the Burger equation is reduced into a system of ordinary differential equations. An optimal strong stability-preserving Runge-Kutta (SSP-RK) method is employed to solve the resulting system of ordinary differential equations. In order to illustrate the accuracy and efficiency of the proposed method, a numerical problem is considered. From the numerical experiment, it is found that the computed result is in good agreement with the exact solution. Stability analysis of the method is also carried out using the matrix stability analysis method and found to be unconditionally stable.

  1. Numerical solution of two dimensional coupled viscous Burger equation using modified cubic B-spline differential quadrature method

    NASA Astrophysics Data System (ADS)

    Shukla, H. S.; Tamsir, Mohammad; Srivastava, Vineet K.; Kumar, Jai

    2014-11-01

    In this paper, a numerical solution of two dimensional nonlinear coupled viscous Burger equation is discussed with appropriate initial and boundary conditions using the modified cubic B-spline differential quadrature method. In this method, the weighting coefficients are computed using the modified cubic B-spline as a basis function in the differential quadrature method. Thus, the coupled Burger equation is reduced into a system of ordinary differential equations. An optimal five stage and fourth-order strong stability preserving Runge-Kutta scheme is applied for solving the resulting system of ordinary differential equations. The accuracy of the scheme is illustrated by taking two numerical examples. Computed results are compared with the exact solutions and other results available in literature. Obtained numerical result shows that the described method is efficient and reliable scheme for solving two dimensional coupled viscous Burger equation.

  2. On distributed wavefront reconstruction for large-scale adaptive optics systems.

    PubMed

    de Visser, Cornelis C; Brunner, Elisabeth; Verhaegen, Michel

    2016-05-01

    The distributed-spline-based aberration reconstruction (D-SABRE) method is proposed for distributed wavefront reconstruction with applications to large-scale adaptive optics systems. D-SABRE decomposes the wavefront sensor domain into any number of partitions and solves a local wavefront reconstruction problem on each partition using multivariate splines. D-SABRE accuracy is within 1% of a global approach with a speedup that scales quadratically with the number of partitions. The D-SABRE is compared to the distributed cumulative reconstruction (CuRe-D) method in open-loop and closed-loop simulations using the YAO adaptive optics simulation tool. D-SABRE accuracy exceeds CuRe-D for low levels of decomposition, and D-SABRE proved to be more robust to variations in the loop gain. PMID:27140879

  3. HIGH RESOLUTION FOURIER ANALYSIS WITH AUTO-REGRESSIVE LINEAR PREDICTION

    SciTech Connect

    Barton, J.; Shirley, D.A.

    1984-04-01

    Auto-regressive linear prediction is adapted to double the resolution of Angle-Resolved Photoemission Extended Fine Structure (ARPEFS) Fourier transforms. Even with the optimal taper (weighting function), the commonly used taper-and-transform Fourier method has limited resolution: it assumes the signal is zero beyond the limits of the measurement. By seeking the Fourier spectrum of an infinite extent oscillation consistent with the measurements but otherwise having maximum entropy, the errors caused by finite data range can be reduced. Our procedure developed to implement this concept adapts auto-regressive linear prediction to extrapolate the signal in an effective and controllable manner. Difficulties encountered when processing actual ARPEFS data are discussed. A key feature of this approach is the ability to convert improved measurements (signal-to-noise or point density) into improved Fourier resolution.

  4. A Logarithmic Complexity Floating Frame of Reference Formulation with Interpolating Splines for Articulated Multi-Flexible-Body Dynamics

    PubMed Central

    Ahn, W.; Anderson, K.S.; De, S.

    2013-01-01

    An interpolating spline-based approach is presented for modeling multi-flexible-body systems in the divide-and-conquer (DCA) scheme. This algorithm uses the floating frame of reference formulation and piecewise spline functions to construct and solve the non-linear equations of motion of the multi-flexible-body system undergoing large rotations and translations. The new approach is compared with the flexible DCA (FDCA) that uses the assumed modes method [1]. The FDCA, in many cases, must resort to sub-structuring to accurately model the deformation of the system. We demonstrate, through numerical examples, that the interpolating spline-based approach is comparable in accuracy and superior in efficiency to the FDCA. The present approach is appropriate for modeling flexible mechanisms with thin 1D bodies undergoing large rotations and translations, including those with irregular shapes. As such, the present approach extends the current capability of the DCA to model deformable systems. The algorithm retains the theoretical logarithmic complexity inherent in the DCA when implemented in parallel. PMID:24124265

  5. Tensor Splines for Interpolation and Approximation of DT-MRI With Applications to Segmentation of Isolated Rat Hippocampi

    PubMed Central

    Barmpoutis, Angelos; Shepherd, Timothy M.; Forder, John R.

    2009-01-01

    In this paper, we present novel algorithms for statistically robust interpolation and approximation of diffusion tensors—which are symmetric positive definite (SPD) matrices—and use them in developing a significant extension to an existing probabilistic algorithm for scalar field segmentation, in order to segment diffusion tensor magnetic resonance imaging (DT-MRI) datasets. Using the Riemannian metric on the space of SPD matrices, we present a novel and robust higher order (cubic) continuous tensor product of B-splines algorithm to approximate the SPD diffusion tensor fields. The resulting approximations are appropriately dubbed tensor splines. Next, we segment the diffusion tensor field by jointly estimating the label (assigned to each voxel) field, which is modeled by a Gauss Markov measure field (GMMF) and the parameters of each smooth tensor spline model representing the labeled regions. Results of interpolation, approximation, and segmentation are presented for synthetic data and real diffusion tensor fields from an isolated rat hippocampus, along with validation. We also present comparisons of our algorithms with existing methods and show significantly improved results in the presence of noise as well as outliers. PMID:18041268

  6. Bayesian Penalized Spline Models for the Analysis of Spatio-Temporal Count Data

    PubMed Central

    Bauer, Cici; Wakefield, Jon; Rue, Håvard; Self, Steve; Feng, Zijian; Wang, Yu

    2016-01-01

    In recent years, the availability of infectious disease counts in time and space has increased, and consequently there has been renewed interest in model formulation for such data. In this paper, we describe a model that was motivated by the need to analyze hand, foot and mouth disease (HFMD) surveillance data in China. The data are aggregated by geographical areas and by week, with the aims of the analysis being to gain insight into the space-time dynamics and to make short-term prediction to implement public health campaigns in those areas with a large predicted disease burden. The model we develop decomposes disease risk into marginal spatial and temporal components, and a space-time interaction piece. The latter is the crucial element, and we use a tensor product spline model with a Markov random field prior on the coefficients of the basis functions. The model can be formulated as a Gaussian Markov random field and so fast computation can be carried out using the integrated nested Laplace approximation (INLA) approach. A simulation study shows that the model can pick up complex space-time structure and our analysis of HFMD data in the central north region of China provides new insights into the dynamics of the disease. PMID:26530705

  7. Parametrization histological grade white adipose tissue of the breast by the cubic spline interpolation

    NASA Astrophysics Data System (ADS)

    Martinez, Leslie A.; Narea, Freddy J.; Cedeño, Fernando; Muñoz, Aaron A.; Reigosa, Aldo; Bravo, Kelly

    2013-11-01

    The noninvasive optical techniques have attracted considerable interest in recent years, because these techniques provide lot of information on the structure and composition of biological tissues more quickly and painlessly, in this study classifies the degrees of histological differentiation of neoplastic tissue of the breast in white adipose tissue samples through numerical pametrización of the diffuse reflection spectra using the Fourier series approximation. The white adipose tissue is irradiated with the spectrophotometer MiniScan XEplus and it from a mastectomy of patients with aged 38 and 50 who have a cancer lesion in the breast. The samples were provided by the pathologist with theirs medical report, it which we indicate the histological grade of tumor. We performed a parameterization algorithm where the classification criterion is the modulus of the minimum difference between the numerical approximation coefficients ai and average numerical approximation coefficients obtained for each histological grade ¯ al. Is confirmed that the cubic spline interpolation this low-power computing lets classified into histological grades with 91% certainty the tissues under study from |ai - ¯ al|

  8. Automatic lung lobe segmentation of COPD patients using iterative B-spline fitting

    NASA Astrophysics Data System (ADS)

    Shamonin, D. P.; Staring, M.; Bakker, M. E.; Xiao, C.; Stolk, J.; Reiber, J. H. C.; Stoel, B. C.

    2012-02-01

    We present an automatic lung lobe segmentation algorithm for COPD patients. The method enhances fissures, removes unlikely fissure candidates, after which a B-spline is fitted iteratively through the remaining candidate objects. The iterative fitting approach circumvents the need to classify each object as being part of the fissure or being noise, and allows the fissure to be detected in multiple disconnected parts. This property is beneficial for good performance in patient data, containing incomplete and disease-affected fissures. The proposed algorithm is tested on 22 COPD patients, resulting in accurate lobe-based densitometry, and a median overlap of the fissure (defined 3 voxels wide) with an expert ground truth of 0.65, 0.54 and 0.44 for the three main fissures. This compares to complete lobe overlaps of 0.99, 0.98, 0.98, 0.97 and 0.87 for the five main lobes, showing promise for lobe segmentation on data of patients with moderate to severe COPD.

  9. Nonrigid Image Registration in Digital Subtraction Angiography Using Multilevel B-Spline

    PubMed Central

    2013-01-01

    We address the problem of motion artifact reduction in digital subtraction angiography (DSA) using image registration techniques. Most of registration algorithms proposed for application in DSA, have been designed for peripheral and cerebral angiography images in which we mainly deal with global rigid motions. These algorithms did not yield good results when applied to coronary angiography images because of complex nonrigid motions that exist in this type of angiography images. Multiresolution and iterative algorithms are proposed to cope with this problem, but these algorithms are associated with high computational cost which makes them not acceptable for real-time clinical applications. In this paper we propose a nonrigid image registration algorithm for coronary angiography images that is significantly faster than multiresolution and iterative blocking methods and outperforms competing algorithms evaluated on the same data sets. This algorithm is based on a sparse set of matched feature point pairs and the elastic registration is performed by means of multilevel B-spline image warping. Experimental results with several clinical data sets demonstrate the effectiveness of our approach. PMID:23971026

  10. CT segmentation of dental shapes by anatomy-driven reformation imaging and B-spline modelling.

    PubMed

    Barone, S; Paoli, A; Razionale, A V

    2016-06-01

    Dedicated imaging methods are among the most important tools of modern computer-aided medical applications. In the last few years, cone beam computed tomography (CBCT) has gained popularity in digital dentistry for 3D imaging of jawbones and teeth. However, the anatomy of a maxillofacial region complicates the assessment of tooth geometry and anatomical location when using standard orthogonal views of the CT data set. In particular, a tooth is defined by a sub-region, which cannot be easily separated from surrounding tissues by only considering pixel grey-intensity values. For this reason, an image enhancement is usually necessary in order to properly segment tooth geometries. In this paper, an anatomy-driven methodology to reconstruct individual 3D tooth anatomies by processing CBCT data is presented. The main concept is to generate a small set of multi-planar reformation images along significant views for each target tooth, driven by the individual anatomical geometry of a specific patient. The reformation images greatly enhance the clearness of the target tooth contours. A set of meaningful 2D tooth contours is extracted and used to automatically model the overall 3D tooth shape through a B-spline representation. The effectiveness of the methodology has been verified by comparing some anatomy-driven reconstructions of anterior and premolar teeth with those obtained by using standard tooth segmentation tools. Copyright © 2015 John Wiley & Sons, Ltd. PMID:26418417

  11. Electron Collisional Excitation Rates for OI USING the B-Spline R-Matrix Approach

    NASA Technical Reports Server (NTRS)

    Zatsarinny, O.; Tayal, S. S.

    2003-01-01

    The B-spline R-matrix approach has been used to calculate electron collisional excitation strengths and rates for transitions between the 3P, 1D, and 1S states of ground configuration and from these states to the states of the excited 2s(sup 2)2p(sup 3)ns (n = 3-5), 2s(sup 2)2p(sup 3)np (n = 3-4), 2s(sup 2)2p(sup 3)nd (n = 3-4), 2s(sup 2)2p(sup 3)4f, and 2s2p(sup 5) configurations. The nonorthogonal orbitals are used for an accurate description of both the target wave functions and the R-matrix basis functions. The thermally averaged collision strengths are obtained from the collision strengths by integrating over a Maxwellian velocity distribution of electron energies, and these are tabulated over a temperature range from 1000 to 60,000 K. The parametric functions of scaled energy have also been obtained to represent collision strengths over a wide energy range or thermally averaged collision strengths at any desired temperature.

  12. Near lossless medical image compression using JPEG-LS and cubic spline interpolation

    NASA Astrophysics Data System (ADS)

    Lin, Tsung-Ching; Chen, Chien-Wen; Chen, Shi-Huang; Truong, Trieu-Kien

    2008-08-01

    In this paper, a near lossless medical image compression scheme combining JPEG-LS with cubic spline interpolation (CSI) is presented. The CSI is developed to subsample image data with minimal distortion and to achieve image compression. It has been shown in literatures that the CSI can be combined with the transform-based image compression algorithm to develop a modified image compression codec, which obtains a higher compression ratio and a better subjective quality of reconstructed image than the standard transform-based codecs. This paper combines the CSI with lossless JPEG-LS to form the modified JPEG-LS scheme and further makes use of this modified codec to medical image compression. By comparing with the JPEG-LS image compression standard, experimental results show that the compression ratio increased over 3 times for the proposed scheme with similar visual quality. The proposed scheme reduces the loading for storing and transmission of image, therefore it is suitable for low bit-rate telemedicine application. The modified JPEG-LS can reduce the loading of storing and transmitting of medical image.

  13. Quartic B-spline collocation method applied to Korteweg de Vries equation

    NASA Astrophysics Data System (ADS)

    Zin, Shazalina Mat; Majid, Ahmad Abd; Ismail, Ahmad Izani Md

    2014-07-01

    The Korteweg de Vries (KdV) equation is known as a mathematical model of shallow water waves. The general form of this equation is ut+ɛuux+μuxxx = 0 where u(x,t) describes the elongation of the wave at displacement x and time t. In this work, one-soliton solution for KdV equation has been obtained numerically using quartic B-spline collocation method for displacement x and using finite difference approach for time t. Two problems have been identified to be solved. Approximate solutions and errors for these two test problems were obtained for different values of t. In order to look into accuracy of the method, L2-norm and L∞-norm have been calculated. Mass, energy and momentum of KdV equation have also been calculated. The results obtained show the present method can approximate the solution very well, but as time increases, L2-norm and L∞-norm are also increase.

  14. Spline-based Study of the Extragalactic Background Light Spectrum using Gamma-Ray Observations

    NASA Astrophysics Data System (ADS)

    Bose, Anoushka; Rathmann-Bloch, Julia; Biteau, Jonathan; Williams, David A.

    2016-01-01

    The extragalactic background light (EBL) is made of all the light emitted by stars and galaxies throughout cosmic history. Expanding on the work of Biteau & Williams 2015, we develop a novel natural cubic spline model of the local EBL spectrum and constrain its parameters using the gamma-ray spectra of 38 blazars measured in the high-energy (HE, 0.1 to 100 GeV) and very-high-energy (VHE, 0.1 to 20 TeV) bands. Starting from this best-fit model, we then study the so-called "delta gamma" (ΔΓ) observable, defined as the difference between the VHE and HE photon indices. This second study is focused on a subset of nine BL Lac objects. The application of a scaling factor to the cosmic optical background (0.1 - 10 nm) significantly impacts the predicted ΔΓ as a function of redshift, whereas a similar modification of the cosmic infrared background (10 - 1000 nm) has no impact. We conclude that the simple delta gamma approach can only constrain part of the EBL spectrum, while a detailed study of the spectra, such as presented in the first part of this research, is needed to constrain the cosmic infrared background.

  15. Multilevel summation with B-spline interpolation for pairwise interactions in molecular dynamics simulations.

    PubMed

    Hardy, David J; Wolff, Matthew A; Xia, Jianlin; Schulten, Klaus; Skeel, Robert D

    2016-03-21

    The multilevel summation method for calculating electrostatic interactions in molecular dynamics simulations constructs an approximation to a pairwise interaction kernel and its gradient, which can be evaluated at a cost that scales linearly with the number of atoms. The method smoothly splits the kernel into a sum of partial kernels of increasing range and decreasing variability with the longer-range parts interpolated from grids of increasing coarseness. Multilevel summation is especially appropriate in the context of dynamics and minimization, because it can produce continuous gradients. This article explores the use of B-splines to increase the accuracy of the multilevel summation method (for nonperiodic boundaries) without incurring additional computation other than a preprocessing step (whose cost also scales linearly). To obtain accurate results efficiently involves technical difficulties, which are overcome by a novel preprocessing algorithm. Numerical experiments demonstrate that the resulting method offers substantial improvements in accuracy and that its performance is competitive with an implementation of the fast multipole method in general and markedly better for Hamiltonian formulations of molecular dynamics. The improvement is great enough to establish multilevel summation as a serious contender for calculating pairwise interactions in molecular dynamics simulations. In particular, the method appears to be uniquely capable for molecular dynamics in two situations, nonperiodic boundary conditions and massively parallel computation, where the fast Fourier transform employed in the particle-mesh Ewald method falls short. PMID:27004867

  16. Medical image compression using cubic spline interpolation with bit-plane compensation

    NASA Astrophysics Data System (ADS)

    Truong, Trieu-Kien; Chen, Shi-Huang; Lin, Tsung-Ching

    2007-03-01

    In this paper, a modified medical image compression algorithm using cubic spline interpolation (CSI) is presented for telemedicine applications. The CSI is developed in order to subsample image data with minimal distortion and to achieve compression. It has been shown in literatures that the CSI can be combined with the JPEG algorithms to develop a modified JPEG codec, which obtains a higher compression ratio and a better quality of reconstructed image than the standard JPEG. However, this modified JPEG codec will lose some high-frequency components of medical images during compression process. To minimize the drawback arose from loss of these high-frequency components, this paper further makes use of bit-plane compensation to the modified JPEG codec. The bit-plane compensation algorithm used in this paper is modified from JBIG2 standard. Experimental results show that the proposed scheme can increase 20~30% compression ratio of original JPEG medical data compression system with similar visual quality. This system can reduce the loading of telecommunication networks and is quite suitable for low bit-rate telemedicine applications.

  17. Nonrigid image registration in digital subtraction angiography using multilevel B-spline.

    PubMed

    Nejati, Mansour; Sadri, Saeid; Amirfattahi, Rassoul

    2013-01-01

    We address the problem of motion artifact reduction in digital subtraction angiography (DSA) using image registration techniques. Most of registration algorithms proposed for application in DSA, have been designed for peripheral and cerebral angiography images in which we mainly deal with global rigid motions. These algorithms did not yield good results when applied to coronary angiography images because of complex nonrigid motions that exist in this type of angiography images. Multiresolution and iterative algorithms are proposed to cope with this problem, but these algorithms are associated with high computational cost which makes them not acceptable for real-time clinical applications. In this paper we propose a nonrigid image registration algorithm for coronary angiography images that is significantly faster than multiresolution and iterative blocking methods and outperforms competing algorithms evaluated on the same data sets. This algorithm is based on a sparse set of matched feature point pairs and the elastic registration is performed by means of multilevel B-spline image warping. Experimental results with several clinical data sets demonstrate the effectiveness of our approach. PMID:23971026

  18. Multilevel summation with B-spline interpolation for pairwise interactions in molecular dynamics simulations

    NASA Astrophysics Data System (ADS)

    Hardy, David J.; Wolff, Matthew A.; Xia, Jianlin; Schulten, Klaus; Skeel, Robert D.

    2016-03-01

    The multilevel summation method for calculating electrostatic interactions in molecular dynamics simulations constructs an approximation to a pairwise interaction kernel and its gradient, which can be evaluated at a cost that scales linearly with the number of atoms. The method smoothly splits the kernel into a sum of partial kernels of increasing range and decreasing variability with the longer-range parts interpolated from grids of increasing coarseness. Multilevel summation is especially appropriate in the context of dynamics and minimization, because it can produce continuous gradients. This article explores the use of B-splines to increase the accuracy of the multilevel summation method (for nonperiodic boundaries) without incurring additional computation other than a preprocessing step (whose cost also scales linearly). To obtain accurate results efficiently involves technical difficulties, which are overcome by a novel preprocessing algorithm. Numerical experiments demonstrate that the resulting method offers substantial improvements in accuracy and that its performance is competitive with an implementation of the fast multipole method in general and markedly better for Hamiltonian formulations of molecular dynamics. The improvement is great enough to establish multilevel summation as a serious contender for calculating pairwise interactions in molecular dynamics simulations. In particular, the method appears to be uniquely capable for molecular dynamics in two situations, nonperiodic boundary conditions and massively parallel computation, where the fast Fourier transform employed in the particle-mesh Ewald method falls short.

  19. An ultrasound study of Canadian French rhotic vowels with polar smoothing spline comparisons.

    PubMed

    Mielke, Jeff

    2015-05-01

    This is an acoustic and articulatory study of Canadian French rhotic vowels, i.e., mid front rounded vowels /ø œ̃ œ/ produced with a rhotic perceptual quality, much like English [ɚ] or [ɹ], leading heureux, commun, and docteur to sound like [ɚʁɚ], [kɔmɚ̃], and [dɔktaɹʁ]. Ultrasound, video, and acoustic data from 23 Canadian French speakers are analyzed using several measures of mid-sagittal tongue contours, showing that the low F3 of rhotic vowels is achieved using bunched and retroflex tongue postures and that the articulatory-acoustic mapping of F1 and F2 are rearranged in systems with rhotic vowels. A subset of speakers' French vowels are compared with their English [ɹ]/[ɚ], revealing that the French vowels are consistently less extreme in low F3 and its articulatory correlates, even for the most rhotic speakers. Polar coordinates are proposed as a replacement for Cartesian coordinates in calculating smoothing spline comparisons of mid-sagittal tongue shapes, because they enable comparisons to be roughly perpendicular to the tongue surface, which is critical for comparisons involving tongue root position but appropriate for all comparisons involving mid-sagittal tongue contours. PMID:25994713

  20. A southern Africa harmonic spline core field model derived from CHAMP satellite data

    NASA Astrophysics Data System (ADS)

    Nahayo, E.; Kotzé, P. B.; McCreadie, H.

    2015-02-01

    The monitoring of the Earth's magnetic field time variation requires a continuous recording of geomagnetic data with a good spatial coverage over the area of study. In southern Africa, ground recording stations are limited and the use of satellite data is needed for the studies where high spatial resolution data is required. We show the fast time variation of the geomagnetic field in the southern Africa region by deriving an harmonic spline model from CHAMP satellite measurements recorded between 2001 and 2010. The derived core field model, the Southern Africa Regional Model (SARM), is compared with the global model GRIMM-2 and the ground based data recorded at Hermanus magnetic observatory (HER) in South Africa and Tsumeb magnetic observatory (TSU) in Namibia where the focus is mainly on the long term variation of the geomagnetic field. The results of this study suggest that the regional model derived from the satellite data alone can be used to study the small scale features of the time variation of the geomagnetic field where ground data is not available. In addition, these results also support the earlier findings of the occurrence of a 2007 magnetic jerk and rapid secular variation fluctuations of 2003 and 2004 in the region.

  1. Merging quantum-chemistry with B-splines to describe molecular photoionization

    NASA Astrophysics Data System (ADS)

    Argenti, L.; Marante, C.; Klinker, M.; Corral, I.; Gonzalez, J.; Martin, F.

    2016-05-01

    Theoretical description of observables in attosecond pump-probe experiments requires a good representation of the system's ionization continuum. For polyelectronic atoms and molecules, however, this is still a challenge, due to the complicated short-range structure of correlated electronic wavefunctions. Whereas quantum chemistry packages (QCP) implementing sophisticated methods to compute bound electronic molecular states are well established, comparable tools for the continuum are not widely available yet. To tackle this problem, we have developed a new approach that, by means of a hybrid Gaussian-B-spline basis, interfaces existing QCPs with close-coupling scattering methods. To illustrate the viability of this approach, we report results for the multichannel ionization of the helium atom and of the hydrogen molecule that are in excellent agreement with existing accurate benchmarks. These findings, together with the flexibility of QCPs, make of this approach a good candidate for the theoretical study of the ionization of poly-electronic systems. FP7/ERC Grant XCHEM 290853.

  2. Spline-based high-accuracy piecewise-polynomial phase-to-sinusoid amplitude converters.

    PubMed

    Petrinović, Davor; Brezović, Marko

    2011-04-01

    We propose a method for direct digital frequency synthesis (DDS) using a cubic spline piecewise-polynomial model for a phase-to-sinusoid amplitude converter (PSAC). This method offers maximum smoothness of the output signal. Closed-form expressions for the cubic polynomial coefficients are derived in the spectral domain and the performance analysis of the model is given in the time and frequency domains. We derive the closed-form performance bounds of such DDS using conventional metrics: rms and maximum absolute errors (MAE) and maximum spurious free dynamic range (SFDR) measured in the discrete time domain. The main advantages of the proposed PSAC are its simplicity, analytical tractability, and inherent numerical stability for high table resolutions. Detailed guidelines for a fixed-point implementation are given, based on the algebraic analysis of all quantization effects. The results are verified on 81 PSAC configurations with the output resolutions from 5 to 41 bits by using a bit-exact simulation. The VHDL implementation of a high-accuracy DDS based on the proposed PSAC with 28-bit input phase word and 32-bit output value achieves SFDR of its digital output signal between 180 and 207 dB, with a signal-to-noise ratio of 192 dB. Its implementation requires only one 18 kB block RAM and three 18-bit embedded multipliers in a typical field-programmable gate array (FPGA) device. PMID:21507749

  3. Bayesian penalized spline models for the analysis of spatio-temporal count data.

    PubMed

    Bauer, Cici; Wakefield, Jon; Rue, Håvard; Self, Steve; Feng, Zijian; Wang, Yu

    2016-05-20

    In recent years, the availability of infectious disease counts in time and space has increased, and consequently, there has been renewed interest in model formulation for such data. In this paper, we describe a model that was motivated by the need to analyze hand, foot, and mouth disease surveillance data in China. The data are aggregated by geographical areas and by week, with the aims of the analysis being to gain insight into the space-time dynamics and to make short-term predictions, which will aid in the implementation of public health campaigns in those areas with a large predicted disease burden. The model we develop decomposes disease-risk into marginal spatial and temporal components and a space-time interaction piece. The latter is the crucial element, and we use a tensor product spline model with a Markov random field prior on the coefficients of the basis functions. The model can be formulated as a Gaussian Markov random field and so fast computation can be carried out using the integrated nested Laplace approximation approach. A simulation study shows that the model can pick up complex space-time structure and our analysis of hand, foot, and mouth disease data in the central north region of China provides new insights into the dynamics of the disease. Copyright © 2015 John Wiley & Sons, Ltd. PMID:26530705

  4. Heteroscedastic transformation cure regression models.

    PubMed

    Chen, Chyong-Mei; Chen, Chen-Hsin

    2016-06-30

    Cure models have been applied to analyze clinical trials with cures and age-at-onset studies with nonsusceptibility. Lu and Ying (On semiparametric transformation cure model. Biometrika 2004; 91:331?-343. DOI: 10.1093/biomet/91.2.331) developed a general class of semiparametric transformation cure models, which assumes that the failure times of uncured subjects, after an unknown monotone transformation, follow a regression model with homoscedastic residuals. However, it cannot deal with frequently encountered heteroscedasticity, which may result from dispersed ranges of failure time span among uncured subjects' strata. To tackle the phenomenon, this article presents semiparametric heteroscedastic transformation cure models. The cure status and the failure time of an uncured subject are fitted by a logistic regression model and a heteroscedastic transformation model, respectively. Unlike the approach of Lu and Ying, we derive score equations from the full likelihood for estimating the regression parameters in the proposed model. The similar martingale difference function to their proposal is used to estimate the infinite-dimensional transformation function. Our proposed estimating approach is intuitively applicable and can be conveniently extended to other complicated models when the maximization of the likelihood may be too tedious to be implemented. We conduct simulation studies to validate large-sample properties of the proposed estimators and to compare with the approach of Lu and Ying via the relative efficiency. The estimating method and the two relevant goodness-of-fit graphical procedures are illustrated by using breast cancer data and melanoma data. Copyright © 2016 John Wiley & Sons, Ltd. PMID:26887342

  5. Regression analysis of cytopathological data

    SciTech Connect

    Whittemore, A.S.; McLarty, J.W.; Fortson, N.; Anderson, K.

    1982-12-01

    Epithelial cells from the human body are frequently labelled according to one of several ordered levels of abnormality, ranging from normal to malignant. The label of the most abnormal cell in a specimen determines the score for the specimen. This paper presents a model for the regression of specimen scores against continuous and discrete variables, as in host exposure to carcinogens. Application to data and tests for adequacy of model fit are illustrated using sputum specimens obtained from a cohort of former asbestos workers.

  6. Generation of global VTEC maps from low latency GNSS observations based on B-spline modelling and Kalman filtering

    NASA Astrophysics Data System (ADS)

    Erdogan, Eren; Dettmering, Denise; Limberger, Marco; Schmidt, Michael; Seitz, Florian; Börger, Klaus; Brandert, Sylvia; Görres, Barbara; Kersten, Wilhelm F.; Bothmer, Volker; Hinrichs, Johannes; Venzmer, Malte

    2015-04-01

    In May 2014 DGFI-TUM (the former DGFI) and the German Space Situational Awareness Centre (GSSAC) started to develop an OPerational Tool for Ionospheric Mapping And Prediction (OPTIMAP); since November 2014 the Institute of Astrophysics at the University of Göttingen (IAG) joined the group as the third partner. This project aims on the computation and prediction of maps of the vertical total electron content (VTEC) and the electron density distribution of the ionosphere on a global scale from both various space-geodetic observation techniques such as GNSS and satellite altimetry as well as Sun observations. In this contribution we present first results, i.e. a near-real time processing framework for generating VTEC maps by assimilating GNSS (GPS, GLONASS) based ionospheric data into a two-dimensional global B-spline approach. To be more specific, the spatial variations of VTEC are modelled by trigonometric B-spline functions in longitude and by endpoint-interpolating polynomial B-spline functions in latitude, respectively. Since B-spline functions are compactly supported and highly localizing our approach can handle large data gaps appropriately and, thus, provides a better approximation of data with heterogeneous density and quality compared to the commonly used spherical harmonics. The presented method models temporal variations of VTEC inside a Kalman filter. The unknown parameters of the filter state vector are composed of the B-spline coefficients as well as the satellite and receiver DCBs. To approximate the temporal variation of these state vector components as part of the filter the dynamical model has to be set up. The current implementation of the filter allows to select between a random walk process, a Gauss-Markov process and a dynamic process driven by an empirical ionosphere model, e.g. the International Reference Ionosphere (IRI). For running the model ionospheric input data is acquired from terrestrial GNSS networks through online archive systems

  7. Multiatlas segmentation as nonparametric regression.

    PubMed

    Awate, Suyash P; Whitaker, Ross T

    2014-09-01

    This paper proposes a novel theoretical framework to model and analyze the statistical characteristics of a wide range of segmentation methods that incorporate a database of label maps or atlases; such methods are termed as label fusion or multiatlas segmentation. We model these multiatlas segmentation problems as nonparametric regression problems in the high-dimensional space of image patches. We analyze the nonparametric estimator's convergence behavior that characterizes expected segmentation error as a function of the size of the multiatlas database. We show that this error has an analytic form involving several parameters that are fundamental to the specific segmentation problem (determined by the chosen anatomical structure, imaging modality, registration algorithm, and label-fusion algorithm). We describe how to estimate these parameters and show that several human anatomical structures exhibit the trends modeled analytically. We use these parameter estimates to optimize the regression estimator. We show that the expected error for large database sizes is well predicted by models learned on small databases. Thus, a few expert segmentations can help predict the database sizes required to keep the expected error below a specified tolerance level. Such cost-benefit analysis is crucial for deploying clinical multiatlas segmentation systems. PMID:24802528

  8. An adapted multi-resolution representation of regional VTEC

    NASA Astrophysics Data System (ADS)

    Liang, Wenjing; Dettmering, Denise; Schmidt, Michael

    2014-05-01

    The resolution of ionosphere models is mainly limited by inhomogenously distributed input data. The International GNSS Service (IGS) provides global ionosphere maps (GIMs) of vertical total electron content (VTEC) values with a spatial resolution of 2.5° in latitude and 5° in longitude. In order to provide local ionospheric structures and support high precise GPS positioning, different high-resolution regional ionosphere models have been developed by using dense observation networks. However, there is no model available with a spatial resolution adapted to the data distribution. In this study we present a regional multi-resolution VTEC model which adapts the model resolution to the data distribution. In our approach, VTEC consists of a given background model such as the International Reference Ionosphere (IRI) and an unknown correction part modeled as a series expansion in terms of B-spline scaling functions. The resolution level of the B-spline functions has to be determined by the distribution of the input data. With a sufficient number of observations, a higher level can be chosen, i.e., finer structures of VTEC can be modeled. The input data are heterogeneously distributed; specifically, the observations are dense over the continent whereas large data gaps exist over the oceans. Furthermore, the GPS stations are unevenly distributed over the continent. A data adapted VTEC model is achieved by combining a regional VTEC part with some local densification areas, each represented by a B-spline expansion. The unknown scaling coefficients of all these parts are then estimated by parameter estimation. In this contribution, our model approach is introduced, including the method of multi-resolution representation (MRR) and of combining the regional and local model parts. Furthermore, we show an example based on GNSS observations from selected permanent stations in South America.

  9. Prediction and control of chaotic processes using nonlinear adaptive networks

    SciTech Connect

    Jones, R.D.; Barnes, C.W.; Flake, G.W.; Lee, K.; Lewis, P.S.; O'Rouke, M.K.; Qian, S.

    1990-01-01

    We present the theory of nonlinear adaptive networks and discuss a few applications. In particular, we review the theory of feedforward backpropagation networks. We then present the theory of the Connectionist Normalized Linear Spline network in both its feedforward and iterated modes. Also, we briefly discuss the theory of stochastic cellular automata. We then discuss applications to chaotic time series, tidal prediction in Venice lagoon, finite differencing, sonar transient detection, control of nonlinear processes, control of a negative ion source, balancing a double inverted pendulum and design advice for free electron lasers and laser fusion targets.

  10. Nonlinear adaptive networks: A little theory, a few applications

    SciTech Connect

    Jones, R.D.; Qian, S.; Barnes, C.W.; Bisset, K.R.; Bruce, G.M.; Lee, K.; Lee, L.A.; Mead, W.C.; O'Rourke, M.K.; Thode, L.E. ); Lee, Y.C.; Flake, G.W. Maryland Univ., College Park, MD ); Poli, I.J. Bologna Univ. )

    1990-01-01

    We present the theory of nonlinear adaptive networks and discuss a few applications. In particular, we review the theory of feedforward backpropagation networks. We than present the theory of the Connectionist Normalized Linear Spline network in both its feedforward and iterated modes. Also, we briefly discuss the theory of stochastic cellular automata. We then discuss applications to chaotic time series tidal prediction in Venice Lagoon, sonar transient detection, control of nonlinear processes, balancing a double inverted pendulum and design advice for free electron lasers. 26 refs., 23 figs.

  11. Practical Session: Multiple Linear Regression

    NASA Astrophysics Data System (ADS)

    Clausel, M.; Grégoire, G.

    2014-12-01

    Three exercises are proposed to illustrate the simple linear regression. In the first one investigates the influence of several factors on atmospheric pollution. It has been proposed by D. Chessel and A.B. Dufour in Lyon 1 (see Sect. 6 of http://pbil.univ-lyon1.fr/R/pdf/tdr33.pdf) and is based on data coming from 20 cities of U.S. Exercise 2 is an introduction to model selection whereas Exercise 3 provides a first example of analysis of variance. Exercises 2 and 3 have been proposed by A. Dalalyan at ENPC (see Exercises 2 and 3 of http://certis.enpc.fr/~dalalyan/Download/TP_ENPC_5.pdf).

  12. Ray-tracing method for creeping waves on arbitrarily shaped nonuniform rational B-splines surfaces.

    PubMed

    Chen, Xi; He, Si-Yuan; Yu, Ding-Feng; Yin, Hong-Cheng; Hu, Wei-Dong; Zhu, Guo-Qiang

    2013-04-01

    An accurate creeping ray-tracing algorithm is presented in this paper to determine the tracks of creeping waves (or creeping rays) on arbitrarily shaped free-form parametric surfaces [nonuniform rational B-splines (NURBS) surfaces]. The main challenge in calculating the surface diffracted fields on NURBS surfaces is due to the difficulty in determining the geodesic paths along which the creeping rays propagate. On one single parametric surface patch, the geodesic paths need to be computed by solving the geodesic equations numerically. Furthermore, realistic objects are generally modeled as the union of several connected NURBS patches. Due to the discontinuity of the parameter between the patches, it is more complicated to compute geodesic paths on several connected patches than on one single patch. Thus, a creeping ray-tracing algorithm is presented in this paper to compute the geodesic paths of creeping rays on the complex objects that are modeled as the combination of several NURBS surface patches. In the algorithm, the creeping ray tracing on each surface patch is performed by solving the geodesic equations with a Runge-Kutta method. When the creeping ray propagates from one patch to another, a transition method is developed to handle the transition of the creeping ray tracing across the border between the patches. This creeping ray-tracing algorithm can meet practical requirements because it can be applied to the objects with complex shapes. The algorithm can also extend the applicability of NURBS for electromagnetic and optical applications. The validity and usefulness of the algorithm can be verified from the numerical results. PMID:23595326

  13. Regional magnetic anomaly fields: 3D Taylor polynomial and surface spline models

    NASA Astrophysics Data System (ADS)

    Feng, Yan; Jiang, Yong; Jiang, Yi; Li, Zheng; Jiang, Jin; Liu, Zhong-Wei; Ye, Mei-Chen; Wang, Hong-Sheng; Li, Xiu-Ming

    2016-03-01

    We used data from 1960.0, 1970.0, 1980.0, 1990.0, and 2000.0 to study the geomagnetic anomaly field over the Chinese mainland by using the three-dimensional Taylor polynomial (3DTP) and the surface spline (SS) models. To obtain the pure anomaly field, the main field and the induced field of the ionospheric and magnetospheric fields were removed from measured data. We also compared the SS model anomalies and the data obtained with Kriging interpolation (KI). The geomagnetic anomaly distribution over the mainland was analyzed based on the SS and 3DTP models by transferring all points from 1960.0-1990.0 to 2000.0. The results suggest that the total intensity F anomalies estimated based on the SS and KI for each year are basically consistent in distribution and intensity. The anomalous distributions in the X-, Y-, and Z-direction and F are mainly negative. The 3DTP model anomalies suggest that the intensity in the X-direction increases from -100 nT to 0 nT with longitude, whereas the intensity in the Y-direction decreases from 400 nT to 20 nT with longitude and over the eastern mainland is almost negative. The intensity in the Z-direction and F are very similar and in most areas it is about -50nT and higher in western Tibet. The SS model anomalies overall reflect the actual distribution of the magnetic field anomalies; however, because of the uneven distribution of measurements, it yields several big anomalies. Owing to the added altitude term, the 3DTP model offers higher precision and is consistent with KI.

  14. Application of thin plate splines for accurate regional ionosphere modeling with multi-GNSS data

    NASA Astrophysics Data System (ADS)

    Krypiak-Gregorczyk, Anna; Wielgosz, Pawel; Borkowski, Andrzej

    2016-04-01

    GNSS-derived regional ionosphere models are widely used in both precise positioning, ionosphere and space weather studies. However, their accuracy is often not sufficient to support precise positioning, RTK in particular. In this paper, we presented new approach that uses solely carrier phase multi-GNSS observables and thin plate splines (TPS) for accurate ionospheric TEC modeling. TPS is a closed solution of a variational problem minimizing both the sum of squared second derivatives of a smoothing function and the deviation between data points and this function. This approach is used in UWM-rt1 regional ionosphere model developed at UWM in Olsztyn. The model allows for providing ionospheric TEC maps with high spatial and temporal resolutions - 0.2x0.2 degrees and 2.5 minutes, respectively. For TEC estimation, EPN and EUPOS reference station data is used. The maps are available with delay of 15-60 minutes. In this paper we compare the performance of UWM-rt1 model with IGS global and CODE regional ionosphere maps during ionospheric storm that took place on March 17th, 2015. During this storm, the TEC level over Europe doubled comparing to earlier quiet days. The performance of the UWM-rt1 model was validated by (a) comparison to reference double-differenced ionospheric corrections over selected baselines, and (b) analysis of post-fit residuals to calibrated carrier phase geometry-free observational arcs at selected test stations. The results show a very good performance of UWM-rt1 model. The obtained post-fit residuals in case of UWM maps are lower by one order of magnitude comparing to IGS maps. The accuracy of UWM-rt1 -derived TEC maps is estimated at 0.5 TECU. This may be directly translated to the user positioning domain.

  15. Residuals and regression diagnostics: focusing on logistic regression.

    PubMed

    Zhang, Zhongheng

    2016-05-01

    Up to now I have introduced most steps in regression model building and validation. The last step is to check whether there are observations that have significant impact on model coefficient and specification. The article firstly describes plotting Pearson residual against predictors. Such plots are helpful in identifying non-linearity and provide hints on how to transform predictors. Next, I focus on observations of outlier, leverage and influence that may have significant impact on model building. Outlier is such an observation that its response value is unusual conditional on covariate pattern. Leverage is an observation with covariate pattern that is far away from the regressor space. Influence is the product of outlier and leverage. That is, when influential observation is dropped from the model, there will be a significant shift of the coefficient. Summary statistics for outlier, leverage and influence are studentized residuals, hat values and Cook's distance. They can be easily visualized with graphs and formally tested using the car package. PMID:27294091

  16. Building Regression Models: The Importance of Graphics.

    ERIC Educational Resources Information Center

    Dunn, Richard

    1989-01-01

    Points out reasons for using graphical methods to teach simple and multiple regression analysis. Argues that a graphically oriented approach has considerable pedagogic advantages in the exposition of simple and multiple regression. Shows that graphical methods may play a central role in the process of building regression models. (Author/LS)

  17. Regression Analysis by Example. 5th Edition

    ERIC Educational Resources Information Center

    Chatterjee, Samprit; Hadi, Ali S.

    2012-01-01

    Regression analysis is a conceptually simple method for investigating relationships among variables. Carrying out a successful application of regression analysis, however, requires a balance of theoretical results, empirical rules, and subjective judgment. "Regression Analysis by Example, Fifth Edition" has been expanded and thoroughly…

  18. Bayesian Unimodal Density Regression for Causal Inference

    ERIC Educational Resources Information Center

    Karabatsos, George; Walker, Stephen G.

    2011-01-01

    Karabatsos and Walker (2011) introduced a new Bayesian nonparametric (BNP) regression model. Through analyses of real and simulated data, they showed that the BNP regression model outperforms other parametric and nonparametric regression models of common use, in terms of predictive accuracy of the outcome (dependent) variable. The other,…

  19. Standards for Standardized Logistic Regression Coefficients

    ERIC Educational Resources Information Center

    Menard, Scott

    2011-01-01

    Standardized coefficients in logistic regression analysis have the same utility as standardized coefficients in linear regression analysis. Although there has been no consensus on the best way to construct standardized logistic regression coefficients, there is now sufficient evidence to suggest a single best approach to the construction of a…

  20. Developmental Regression in Autism Spectrum Disorders

    ERIC Educational Resources Information Center

    Rogers, Sally J.

    2004-01-01

    The occurrence of developmental regression in autism is one of the more puzzling features of this disorder. Although several studies have documented the validity of parental reports of regression using home videos, accumulating data suggest that most children who demonstrate regression also demonstrated previous, subtle, developmental differences.…

  1. Adaptive Management

    EPA Science Inventory

    Adaptive management is an approach to natural resource management that emphasizes learning through management where knowledge is incomplete, and when, despite inherent uncertainty, managers and policymakers must act. Unlike a traditional trial and error approach, adaptive managem...

  2. Estimating equivalence with quantile regression.

    PubMed

    Cade, Brian S

    2011-01-01

    Equivalence testing and corresponding confidence interval estimates are used to provide more enlightened statistical statements about parameter estimates by relating them to intervals of effect sizes deemed to be of scientific or practical importance rather than just to an effect size of zero. Equivalence tests and confidence interval estimates are based on a null hypothesis that a parameter estimate is either outside (inequivalence hypothesis) or inside (equivalence hypothesis) an equivalence region, depending on the question of interest and assignment of risk. The former approach, often referred to as bioequivalence testing, is often used in regulatory settings because it reverses the burden of proof compared to a standard test of significance, following a precautionary principle for environmental protection. Unfortunately, many applications of equivalence testing focus on establishing average equivalence by estimating differences in means of distributions that do not have homogeneous variances. I discuss how to compare equivalence across quantiles of distributions using confidence intervals on quantile regression estimates that detect differences in heterogeneous distributions missed by focusing on means. I used one-tailed confidence intervals based on inequivalence hypotheses in a two-group treatment-control design for estimating bioequivalence of arsenic concentrations in soils at an old ammunition testing site and bioequivalence of vegetation biomass at a reclaimed mining site. Two-tailed confidence intervals based both on inequivalence and equivalence hypotheses were used to examine quantile equivalence for negligible trends over time for a continuous exponential model of amphibian abundance. PMID:21516905

  3. Insulin resistance: regression and clustering.

    PubMed

    Yoon, Sangho; Assimes, Themistocles L; Quertermous, Thomas; Hsiao, Chin-Fu; Chuang, Lee-Ming; Hwu, Chii-Min; Rajaratnam, Bala; Olshen, Richard A

    2014-01-01

    In this paper we try to define insulin resistance (IR) precisely for a group of Chinese women. Our definition deliberately does not depend upon body mass index (BMI) or age, although in other studies, with particular random effects models quite different from models used here, BMI accounts for a large part of the variability in IR. We accomplish our goal through application of Gauss mixture vector quantization (GMVQ), a technique for clustering that was developed for application to lossy data compression. Defining data come from measurements that play major roles in medical practice. A precise statement of what the data are is in Section 1. Their family structures are described in detail. They concern levels of lipids and the results of an oral glucose tolerance test (OGTT). We apply GMVQ to residuals obtained from regressions of outcomes of an OGTT and lipids on functions of age and BMI that are inferred from the data. A bootstrap procedure developed for our family data supplemented by insights from other approaches leads us to believe that two clusters are appropriate for defining IR precisely. One cluster consists of women who are IR, and the other of women who seem not to be. Genes and other features are used to predict cluster membership. We argue that prediction with "main effects" is not satisfactory, but prediction that includes interactions may be. PMID:24887437

  4. Harmonic regression and scale stability.

    PubMed

    Lee, Yi-Hsuan; Haberman, Shelby J

    2013-10-01

    Monitoring a very frequently administered educational test with a relatively short history of stable operation imposes a number of challenges. Test scores usually vary by season, and the frequency of administration of such educational tests is also seasonal. Although it is important to react to unreasonable changes in the distributions of test scores in a timely fashion, it is not a simple matter to ascertain what sort of distribution is really unusual. Many commonly used approaches for seasonal adjustment are designed for time series with evenly spaced observations that span many years and, therefore, are inappropriate for data from such educational tests. Harmonic regression, a seasonal-adjustment method, can be useful in monitoring scale stability when the number of years available is limited and when the observations are unevenly spaced. Additional forms of adjustments can be included to account for variability in test scores due to different sources of population variations. To illustrate, real data are considered from an international language assessment. PMID:24092490

  5. Using CNLS-net (Connectionist Normalized Local Spline-network) to predict the Mackey-Glass chaotic time series

    SciTech Connect

    Mead, W.C.; Jones, R.D.; Barnes, C.W.; Lee, L.A.; O'Rourke, M.K. ); Lee, Y.C.; Flake, G.W. Maryland Univ., College Park, MD )

    1991-01-01

    We use the Connectionist Normalized Local Spline (CNLS) network to learn the dynamics of the Mackey-Glass time-delay differential equation, for the case {tau} = 30. We show the optimum network operating mode and determine the accuracy and robustness of predictions. We obtain pedictions of varying accuracy using some 2--120 minutes of execution time on a Sun SPARC-1 workstation. CNLS-net is capable of very good performance in predicting the Mackey-Glass time series. 11 refs., 4 figs.

  6. Signal-to-noise ratio estimation on SEM images using cubic spline interpolation with Savitzky-Golay smoothing.

    PubMed

    Sim, K S; Kiani, M A; Nia, M E; Tso, C P

    2014-01-01

    A new technique based on cubic spline interpolation with Savitzky-Golay noise reduction filtering is designed to estimate signal-to-noise ratio of scanning electron microscopy (SEM) images. This approach is found to present better result when compared with two existing techniques: nearest neighbourhood and first-order interpolation. When applied to evaluate the quality of SEM images, noise can be eliminated efficiently with optimal choice of scan rate from real-time SEM images, without generating corruption or increasing scanning time. PMID:24164248

  7. Developmental regression in autism spectrum disorder

    PubMed Central

    Al Backer, Nouf Backer

    2015-01-01

    The occurrence of developmental regression in autism spectrum disorder (ASD) is one of the most puzzling phenomena of this disorder. A little is known about the nature and mechanism of developmental regression in ASD. About one-third of young children with ASD lose some skills during the preschool period, usually speech, but sometimes also nonverbal communication, social or play skills are also affected. There is a lot of evidence suggesting that most children who demonstrate regression also had previous, subtle, developmental differences. It is difficult to predict the prognosis of autistic children with developmental regression. It seems that the earlier development of social, language, and attachment behaviors followed by regression does not predict the later recovery of skills or better developmental outcomes. The underlying mechanisms that lead to regression in autism are unknown. The role of subclinical epilepsy in the developmental regression of children with autism remains unclear. PMID:27493417

  8. A Survey of UML Based Regression Testing

    NASA Astrophysics Data System (ADS)

    Fahad, Muhammad; Nadeem, Aamer

    Regression testing is the process of ensuring software quality by analyzing whether changed parts behave as intended, and unchanged parts are not affected by the modifications. Since it is a costly process, a lot of techniques are proposed in the research literature that suggest testers how to build regression test suite from existing test suite with minimum cost. In this paper, we discuss the advantages and drawbacks of using UML diagrams for regression testing and analyze that UML model helps in identifying changes for regression test selection effectively. We survey the existing UML based regression testing techniques and provide an analysis matrix to give a quick insight into prominent features of the literature work. We discuss the open research issues like managing and reducing the size of regression test suite, prioritization of the test cases that would be helpful during strict schedule and resources that remain to be addressed for UML based regression testing.

  9. Adaptive capture of expert behavior

    SciTech Connect

    Jones, R.D.; Barrett, C.L.; Hand, U.; Gordon, R.C.

    1994-08-01

    The authors smoothed and captured a set of expert rules with adaptive networks. The motivation for doing this is discussed. (1) Smoothing leads to stabler control actions. (2) For some sets of rules, the evaluation of the rules can be sped up. This is important in large-scale simulations where many intelligent elements are present. (3) Variability of the intelligent elements can be achieved by adjusting the weights in an adaptive network. (4) After capture has occurred, the weights can be adjusted based on performance criteria. The authors thus have the capability of learning a new set of rules that lead to better performance. The set of rules the authors chose to capture were based on a set of threat determining rules for tank commanders. The approach in this paper: (1) They smoothed the rules. The rule set was converted into a simple set of arithmetic statements. Continuous, non-binary inputs, are now permitted. (2) An operational measure of capturability was developed. (3) They chose four candidate networks for the rule set capture: (a) multi-linear network, (b) adaptive partial least squares, (c) connectionist normalized local spline (CNLS) network, and (d) CNLS net with a PLS preprocessor. These networks were able to capture the rule set to within a few percent. For the simple tank rule set, the multi-linear network performed the best. When the rules were modified to include more nonlinear behavior, CNLS net performed better than the other three nets which made linear assumptions. (4) The networks were tested for robustness to input noise. Noise levels of plus or minus 10% had no real effect on the network performance. Noise levels in the plus or minus 30% range degraded performance by a factor of two. Some performance enhancement occurred when the networks were trained with noisy data. (5) The scaling of the evaluation time was calculated. (6) Human variation can be mimicked in all the networks by perturbing the weights.

  10. Distributed lag and spline modeling for predicting energy expenditure from accelerometry in youth

    PubMed Central

    Chen, Kong Y.; Acra, Sari A.; Buchowski, Maciej S.

    2010-01-01

    Movement sensing using accelerometers is commonly used for the measurement of physical activity (PA) and estimating energy expenditure (EE) under free-living conditions. The major limitation of this approach is lack of accuracy and precision in estimating EE, especially in low-intensity activities. Thus the objective of this study was to investigate benefits of a distributed lag spline (DLS) modeling approach for the prediction of total daily EE (TEE) and EE in sedentary (1.0–1.5 metabolic equivalents; MET), light (1.5–3.0 MET), and moderate/vigorous (≥3.0 MET) intensity activities in 10- to 17-year-old youth (n = 76). We also explored feasibility of the DLS modeling approach to predict physical activity EE (PAEE) and METs. Movement was measured by Actigraph accelerometers placed on the hip, wrist, and ankle. With whole-room indirect calorimeter as the reference standard, prediction models (Hip, Wrist, Ankle, Hip+Wrist, Hip+Wrist+Ankle) for TEE, PAEE, and MET were developed and validated using the fivefold cross-validation method. The TEE predictions by these DLS models were not significantly different from the room calorimeter measurements (all P > 0.05). The Hip+Wrist+Ankle predicted TEE better than other models and reduced prediction errors in moderate/vigorous PA for TEE, MET, and PAEE (all P < 0.001). The Hip+Wrist reduced prediction errors for the PAEE and MET at sedentary PA (P = 0.020 and 0.021) compared with the Hip. Models that included Wrist correctly classified time spent at light PA better than other models. The means and standard deviations of the prediction errors for the Hip+Wrist+Ankle and Hip were 0.4 ± 144.0 and 1.5 ± 164.7 kcal for the TEE, 0.0 ± 84.2 and 1.3 ± 104.7 kcal for the PAEE, and −1.1 ± 97.6 and −0.1 ± 108.6 MET min for the MET models. We conclude that the DLS approach for accelerometer data improves detailed EE prediction in youth. PMID:19959770

  11. Area-to-point regression kriging for pan-sharpening

    NASA Astrophysics Data System (ADS)

    Wang, Qunming; Shi, Wenzhong; Atkinson, Peter M.

    2016-04-01

    Pan-sharpening is a technique to combine the fine spatial resolution panchromatic (PAN) band with the coarse spatial resolution multispectral bands of the same satellite to create a fine spatial resolution multispectral image. In this paper, area-to-point regression kriging (ATPRK) is proposed for pan-sharpening. ATPRK considers the PAN band as the covariate. Moreover, ATPRK is extended with a local approach, called adaptive ATPRK (AATPRK), which fits a regression model using a local, non-stationary scheme such that the regression coefficients change across the image. The two geostatistical approaches, ATPRK and AATPRK, were compared to the 13 state-of-the-art pan-sharpening approaches summarized in Vivone et al. (2015) in experiments on three separate datasets. ATPRK and AATPRK produced more accurate pan-sharpened images than the 13 benchmark algorithms in all three experiments. Unlike the benchmark algorithms, the two geostatistical solutions precisely preserved the spectral properties of the original coarse data. Furthermore, ATPRK can be enhanced by a local scheme in AATRPK, in cases where the residuals from a global regression model are such that their spatial character varies locally.

  12. Cosine-Weighted B-spline interpolation: a fast and high-quality reconstruction scheme for the Body-Centered Cubic lattice.

    PubMed

    Csébfalvi, Balázs

    2013-09-01

    In this paper, Cosine-Weighted B-spline (CWB) filters are proposed for interpolation on the optimal Body-Centered Cubic (BCC) lattice. We demonstrate that our CWB filters can well exploit the fast trilinear texture-fetching capability of modern GPUs, and outperform the state-of-the-art box-spline filters not just in terms of efficiency, but in terms of visual quality and numerical accuracy as well. Furthermore, we rigorously show that the CWB filters are better tailored to the BCC lattice than the previously proposed quasi-interpolating BCC B-spline filters, because they form a Riesz basis; exactly reproduce the original signal at the lattice points; but still provide the same approximation order. PMID:23846091

  13. Automatic optimal filament segmentation with sub-pixel accuracy using generalized linear models and B-spline level-sets.

    PubMed

    Xiao, Xun; Geyer, Veikko F; Bowne-Anderson, Hugo; Howard, Jonathon; Sbalzarini, Ivo F

    2016-08-01

    Biological filaments, such as actin filaments, microtubules, and cilia, are often imaged using different light-microscopy techniques. Reconstructing the filament curve from the acquired images constitutes the filament segmentation problem. Since filaments have lower dimensionality than the image itself, there is an inherent trade-off between tracing the filament with sub-pixel accuracy and avoiding noise artifacts. Here, we present a globally optimal filament segmentation method based on B-spline vector level-sets and a generalized linear model for the pixel intensity statistics. We show that the resulting optimization problem is convex and can hence be solved with global optimality. We introduce a simple and efficient algorithm to compute such optimal filament segmentations, and provide an open-source implementation as an ImageJ/Fiji plugin. We further derive an information-theoretic lower bound on the filament segmentation error, quantifying how well an algorithm could possibly do given the information in the image. We show that our algorithm asymptotically reaches this bound in the spline coefficients. We validate our method in comprehensive benchmarks, compare with other methods, and show applications from fluorescence, phase-contrast, and dark-field microscopy. PMID:27104582

  14. Automatic and accurate reconstruction of distal humerus contours through B-Spline fitting based on control polygon deformation.

    PubMed

    Mostafavi, Kamal; Tutunea-Fatan, O Remus; Bordatchev, Evgueni V; Johnson, James A

    2014-12-01

    The strong advent of computer-assisted technologies experienced by the modern orthopedic surgery prompts for the expansion of computationally efficient techniques to be built on the broad base of computer-aided engineering tools that are readily available. However, one of the common challenges faced during the current developmental phase continues to remain the lack of reliable frameworks to allow a fast and precise conversion of the anatomical information acquired through computer tomography to a format that is acceptable to computer-aided engineering software. To address this, this study proposes an integrated and automatic framework capable to extract and then postprocess the original imaging data to a common planar and closed B-Spline representation. The core of the developed platform relies on the approximation of the discrete computer tomography data by means of an original two-step B-Spline fitting technique based on successive deformations of the control polygon. In addition to its rapidity and robustness, the developed fitting technique was validated to produce accurate representations that do not deviate by more than 0.2 mm with respect to alternate representations of the bone geometry that were obtained through different-contact-based-data acquisition or data processing methods. PMID:25515225

  15. Low speed wind tunnel investigation of span load alteration, forward-located spoilers, and splines as trailing-vortex-hazard alleviation devices on a transport aircraft model

    NASA Technical Reports Server (NTRS)

    Croom, D. R.; Dunham, R. E., Jr.

    1975-01-01

    The effectiveness of a forward-located spoiler, a spline, and span load alteration due to a flap configuration change as trailing-vortex-hazard alleviation methods was investigated. For the transport aircraft model in the normal approach configuration, the results indicate that either a forward-located spoiler or a spline is effective in reducing the trailing-vortex hazard. The results also indicate that large changes in span loading, due to retraction of the outboard flap, may be an effective method of reducing the trailing-vortex hazard.

  16. Computing global minimizers to a constrained B-spline image registration problem from optimal l1 perturbations to block match data

    PubMed Central

    Castillo, Edward; Castillo, Richard; Fuentes, David; Guerrero, Thomas

    2014-01-01

    Purpose: Block matching is a well-known strategy for estimating corresponding voxel locations between a pair of images according to an image similarity metric. Though robust to issues such as image noise and large magnitude voxel displacements, the estimated point matches are not guaranteed to be spatially accurate. However, the underlying optimization problem solved by the block matching procedure is similar in structure to the class of optimization problem associated with B-spline based registration methods. By exploiting this relationship, the authors derive a numerical method for computing a global minimizer to a constrained B-spline registration problem that incorporates the robustness of block matching with the global smoothness properties inherent to B-spline parameterization. Methods: The method reformulates the traditional B-spline registration problem as a basis pursuit problem describing the minimal l1-perturbation to block match pairs required to produce a B-spline fitting error within a given tolerance. The sparsity pattern of the optimal perturbation then defines a voxel point cloud subset on which the B-spline fit is a global minimizer to a constrained variant of the B-spline registration problem. As opposed to traditional B-spline algorithms, the optimization step involving the actual image data is addressed by block matching. Results: The performance of the method is measured in terms of spatial accuracy using ten inhale/exhale thoracic CT image pairs (available for download at www.dir-lab.com) obtained from the COPDgene dataset and corresponding sets of expert-determined landmark point pairs. The results of the validation procedure demonstrate that the method can achieve a high spatial accuracy on a significantly complex image set. Conclusions: The proposed methodology is demonstrated to achieve a high spatial accuracy and is generalizable in that in can employ any displacement field parameterization described as a least squares fit to block match

  17. Adaptive SPECT

    PubMed Central

    Barrett, Harrison H.; Furenlid, Lars R.; Freed, Melanie; Hesterman, Jacob Y.; Kupinski, Matthew A.; Clarkson, Eric; Whitaker, Meredith K.

    2008-01-01

    Adaptive imaging systems alter their data-acquisition configuration or protocol in response to the image information received. An adaptive pinhole single-photon emission computed tomography (SPECT) system might acquire an initial scout image to obtain preliminary information about the radiotracer distribution and then adjust the configuration or sizes of the pinholes, the magnifications, or the projection angles in order to improve performance. This paper briefly describes two small-animal SPECT systems that allow this flexibility and then presents a framework for evaluating adaptive systems in general, and adaptive SPECT systems in particular. The evaluation is in terms of the performance of linear observers on detection or estimation tasks. Expressions are derived for the ideal linear (Hotelling) observer and the ideal linear (Wiener) estimator with adaptive imaging. Detailed expressions for the performance figures of merit are given, and possible adaptation rules are discussed. PMID:18541485

  18. Regression in schizophrenia and its therapeutic value.

    PubMed

    Yazaki, N

    1992-03-01

    Using the regression evaluation scale, 25 schizophrenic patients were classified into three groups of Dissolution/autism (DAUG), Dissolution----attachment (DATG) and Non-regression (NRG). The regression of DAUG was of the type in which autism occurred when destructiveness emerged, while the regression of DATG was of the type in which attachment occurred when destructiveness emerged. This suggests that the regressive phenomena are an actualized form of the approach complex. In order to determine the factors distinguishing these two groups, I investigated psychiatric symptoms, mother-child relationships, premorbid personalities and therapeutic interventions. I believe that these factors form a continuity in which they interrelatedly determine the regressive state. Foremost among them, I stressed the importance of the mother-child relationship. PMID:1353128

  19. Data Mining within a Regression Framework

    NASA Astrophysics Data System (ADS)

    Berk, Richard A.

    Regression analysis can imply a far wider range of statistical procedures than often appreciated. In this chapter, a number of common Data Mining procedures are discussed within a regression framework. These include non-parametric smoothers, classification and regression trees, bagging, and random forests. In each case, the goal is to characterize one or more of the distributional features of a response conditional on a set of predictors.

  20. LRGS: Linear Regression by Gibbs Sampling

    NASA Astrophysics Data System (ADS)

    Mantz, Adam B.

    2016-02-01

    LRGS (Linear Regression by Gibbs Sampling) implements a Gibbs sampler to solve the problem of multivariate linear regression with uncertainties in all measured quantities and intrinsic scatter. LRGS extends an algorithm by Kelly (2007) that used Gibbs sampling for performing linear regression in fairly general cases in two ways: generalizing the procedure for multiple response variables, and modeling the prior distribution of covariates using a Dirichlet process.

  1. Geodesic least squares regression on information manifolds

    SciTech Connect

    Verdoolaege, Geert

    2014-12-05

    We present a novel regression method targeted at situations with significant uncertainty on both the dependent and independent variables or with non-Gaussian distribution models. Unlike the classic regression model, the conditional distribution of the response variable suggested by the data need not be the same as the modeled distribution. Instead they are matched by minimizing the Rao geodesic distance between them. This yields a more flexible regression method that is less constrained by the assumptions imposed through the regression model. As an example, we demonstrate the improved resistance of our method against some flawed model assumptions and we apply this to scaling laws in magnetic confinement fusion.

  2. Quantile regression applied to spectral distance decay

    USGS Publications Warehouse

    Rocchini, D.; Cade, B.S.

    2008-01-01

    Remotely sensed imagery has long been recognized as a powerful support for characterizing and estimating biodiversity. Spectral distance among sites has proven to be a powerful approach for detecting species composition variability. Regression analysis of species similarity versus spectral distance allows us to quantitatively estimate the amount of turnover in species composition with respect to spectral and ecological variability. In classical regression analysis, the residual sum of squares is minimized for the mean of the dependent variable distribution. However, many ecological data sets are characterized by a high number of zeroes that add noise to the regression model. Quantile regressions can be used to evaluate trend in the upper quantiles rather than a mean trend across the whole distribution of the dependent variable. In this letter, we used ordinary least squares (OLS) and quantile regressions to estimate the decay of species similarity versus spectral distance. The achieved decay rates were statistically nonzero (p < 0.01), considering both OLS and quantile regressions. Nonetheless, the OLS regression estimate of the mean decay rate was only half the decay rate indicated by the upper quantiles. Moreover, the intercept value, representing the similarity reached when the spectral distance approaches zero, was very low compared with the intercepts of the upper quantiles, which detected high species similarity when habitats are more similar. In this letter, we demonstrated the power of using quantile regressions applied to spectral distance decay to reveal species diversity patterns otherwise lost or underestimated by OLS regression. ?? 2008 IEEE.

  3. Image segmentation via piecewise constant regression

    NASA Astrophysics Data System (ADS)

    Acton, Scott T.; Bovik, Alan C.

    1994-09-01

    We introduce a novel unsupervised image segmentation technique that is based on piecewise constant (PICO) regression. Given an input image, a PICO output image for a specified feature size (scale) is computed via nonlinear regression. The regression effectively provides the constant region segmentation of the input image that has a minimum deviation from the input image. PICO regression-based segmentation avoids the problems of region merging, poor localization, region boundary ambiguity, and region fragmentation. Additionally, our segmentation method is particularly well-suited for corrupted (noisy) input data. An application to segmentation and classification of remotely sensed imagery is provided.

  4. Hybrid fuzzy regression with trapezoidal fuzzy data

    NASA Astrophysics Data System (ADS)

    Razzaghnia, T.; Danesh, S.; Maleki, A.

    2011-12-01

    In this regard, this research deals with a method for hybrid fuzzy least-squares regression. The extension of symmetric triangular fuzzy coefficients to asymmetric trapezoidal fuzzy coefficients is considered as an effective measure for removing unnecessary fuzziness of the linear fuzzy model. First, trapezoidal fuzzy variable is applied to derive a bivariate regression model. In the following, normal equations are formulated to solve the four parts of hybrid regression coefficients. Also the model is extended to multiple regression analysis. Eventually, method is compared with Y-H.O. chang's model.

  5. Low temperature-induced circulating triiodothyronine accelerates seasonal testicular regression.

    PubMed

    Ikegami, Keisuke; Atsumi, Yusuke; Yorinaga, Eriko; Ono, Hiroko; Murayama, Itaru; Nakane, Yusuke; Ota, Wataru; Arai, Natsumi; Tega, Akinori; Iigo, Masayuki; Darras, Veerle M; Tsutsui, Kazuyoshi; Hayashi, Yoshitaka; Yoshida, Shosei; Yoshimura, Takashi

    2015-02-01

    In temperate zones, animals restrict breeding to specific seasons to maximize the survival of their offspring. Birds have evolved highly sophisticated mechanisms of seasonal regulation, and their testicular mass can change 100-fold within a few weeks. Recent studies on Japanese quail revealed that seasonal gonadal development is regulated by central thyroid hormone activation within the hypothalamus, depending on the photoperiodic changes. By contrast, the mechanisms underlying seasonal testicular regression remain unclear. Here we show the effects of short day and low temperature on testicular regression in quail. Low temperature stimulus accelerated short day-induced testicular regression by shutting down the hypothalamus-pituitary-gonadal axis and inducing meiotic arrest and germ cell apoptosis. Induction of T3 coincided with the climax of testicular regression. Temporal gene expression analysis over the course of apoptosis revealed the suppression of LH response genes and activation of T3 response genes involved in amphibian metamorphosis within the testis. Daily ip administration of T3 mimicked the effects of low temperature stimulus on germ cell apoptosis and testicular mass. Although type 2 deiodinase, a thyroid hormone-activating enzyme, in the brown adipose tissue generates circulating T3 under low-temperature conditions in mammals, there is no distinct brown adipose tissue in birds. In birds, type 2 deiodinase is induced by low temperature exclusively in the liver, which appears to be caused by increased food consumption. We conclude that birds use low temperature-induced circulating T3 not only for adaptive thermoregulation but also to trigger apoptosis to accelerate seasonal testicular regression. PMID:25406020

  6. Assessing regression kriging for its ability to represent precipitation fields over complex terrain using different gauging network densities.

    NASA Astrophysics Data System (ADS)

    Tsanis, Ioannis; Grillakis, Manolis; Varouchakis, Emmanouil; Koutroulis, Aristeidis; Seiradakis, Kostantinos

    2015-04-01

    Distributed hydrological modeling require spatially continuous precipitation data of high quality. However, precipitation is usually measured locally at a limited number of stations. Especially in areas of complex terrain, where the topography plays key role in the precipitation process, the gauging network is usually sparse or malfunction. The need of reliable precipitation data has led to the development of various spatial interpolation techniques specially designed for precipitation. Methodologies that can combine precipitation data to secondary information have been developed improving the skill of the interpolation. Regression kriging is an interpolation methodology which uses variable point values by combining a regression approach with a geostatistical approach (i.e. measuring spatial autocorrelation by kriging). The methodology is simple to use and has been already implemented in R and ArcGIS environments, thus it has a wider board of potential users. The methodology is assessed for its ability to represent precipitation fields in various precipitation station densities. Moreover, the results of Regression Kriging interpolation are compared to other interpolation techniques such as IDW, Kriging, Natural neighbor and spline, implemented in ArcGIS toolbox.

  7. Deriving the Regression Equation without Using Calculus

    ERIC Educational Resources Information Center

    Gordon, Sheldon P.; Gordon, Florence S.

    2004-01-01

    Probably the one "new" mathematical topic that is most responsible for modernizing courses in college algebra and precalculus over the last few years is the idea of fitting a function to a set of data in the sense of a least squares fit. Whether it be simple linear regression or nonlinear regression, this topic opens the door to applying the…

  8. Regression Analysis and the Sociological Imagination

    ERIC Educational Resources Information Center

    De Maio, Fernando

    2014-01-01

    Regression analysis is an important aspect of most introductory statistics courses in sociology but is often presented in contexts divorced from the central concerns that bring students into the discipline. Consequently, we present five lesson ideas that emerge from a regression analysis of income inequality and mortality in the USA and Canada.

  9. Illustration of Regression towards the Means

    ERIC Educational Resources Information Center

    Govindaraju, K.; Haslett, S. J.

    2008-01-01

    This article presents a procedure for generating a sequence of data sets which will yield exactly the same fitted simple linear regression equation y = a + bx. Unless rescaled, the generated data sets will have progressively smaller variability for the two variables, and the associated response and covariate will "regress" towards their…

  10. Stepwise versus Hierarchical Regression: Pros and Cons

    ERIC Educational Resources Information Center

    Lewis, Mitzi

    2007-01-01

    Multiple regression is commonly used in social and behavioral data analysis. In multiple regression contexts, researchers are very often interested in determining the "best" predictors in the analysis. This focus may stem from a need to identify those predictors that are supportive of theory. Alternatively, the researcher may simply be interested…

  11. Cross-Validation, Shrinkage, and Multiple Regression.

    ERIC Educational Resources Information Center

    Hynes, Kevin

    One aspect of multiple regression--the shrinkage of the multiple correlation coefficient on cross-validation is reviewed. The paper consists of four sections. In section one, the distinction between a fixed and a random multiple regression model is made explicit. In section two, the cross-validation paradigm and an explanation for the occurrence…

  12. Principles of Quantile Regression and an Application

    ERIC Educational Resources Information Center

    Chen, Fang; Chalhoub-Deville, Micheline

    2014-01-01

    Newer statistical procedures are typically introduced to help address the limitations of those already in practice or to deal with emerging research needs. Quantile regression (QR) is introduced in this paper as a relatively new methodology, which is intended to overcome some of the limitations of least squares mean regression (LMR). QR is more…

  13. Regression Analysis: Legal Applications in Institutional Research

    ERIC Educational Resources Information Center

    Frizell, Julie A.; Shippen, Benjamin S., Jr.; Luna, Andrew L.

    2008-01-01

    This article reviews multiple regression analysis, describes how its results should be interpreted, and instructs institutional researchers on how to conduct such analyses using an example focused on faculty pay equity between men and women. The use of multiple regression analysis will be presented as a method with which to compare salaries of…

  14. Dealing with Outliers: Robust, Resistant Regression

    ERIC Educational Resources Information Center

    Glasser, Leslie

    2007-01-01

    Least-squares linear regression is the best of statistics and it is the worst of statistics. The reasons for this paradoxical claim, arising from possible inapplicability of the method and the excessive influence of "outliers", are discussed and substitute regression methods based on median selection, which is both robust and resistant, are…

  15. A Practical Guide to Regression Discontinuity

    ERIC Educational Resources Information Center

    Jacob, Robin; Zhu, Pei; Somers, Marie-Andrée; Bloom, Howard

    2012-01-01

    Regression discontinuity (RD) analysis is a rigorous nonexperimental approach that can be used to estimate program impacts in situations in which candidates are selected for treatment based on whether their value for a numeric rating exceeds a designated threshold or cut-point. Over the last two decades, the regression discontinuity approach has…

  16. Sulphasalazine and regression of rheumatoid nodules.

    PubMed

    Englert, H J; Hughes, G R; Walport, M J

    1987-03-01

    The regression of small rheumatoid nodules was noted in four patients after starting sulphasalazine therapy. This coincided with an improvement in synovitis and also falls in erythrocyte sedimentation rate (ESR) and C reactive protein (CRP). The relation between the nodule regression and the sulphasalazine therapy is discussed. PMID:2883940

  17. A Simulation Investigation of Principal Component Regression.

    ERIC Educational Resources Information Center

    Allen, David E.

    Regression analysis is one of the more common analytic tools used by researchers. However, multicollinearity between the predictor variables can cause problems in using the results of regression analyses. Problems associated with multicollinearity include entanglement of relative influences of variables due to reduced precision of estimation,…

  18. Three-Dimensional Modeling in Linear Regression.

    ERIC Educational Resources Information Center

    Herman, James D.

    Linear regression examines the relationship between one or more independent (predictor) variables and a dependent variable. By using a particular formula, regression determines the weights needed to minimize the error term for a given set of predictors. With one predictor variable, the relationship between the predictor and the dependent variable…

  19. SU-E-J-109: Evaluation of Deformable Accumulated Parotid Doses Using Different Registration Algorithms in Adaptive Head and Neck Radiotherapy

    SciTech Connect

    Xu, S; Liu, B

    2015-06-15

    Purpose: Three deformable image registration (DIR) algorithms are utilized to perform deformable dose accumulation for head and neck tomotherapy treatment, and the differences of the accumulated doses are evaluated. Methods: Daily MVCT data for 10 patients with pathologically proven nasopharyngeal cancers were analyzed. The data were acquired using tomotherapy (TomoTherapy, Accuray) at the PLA General Hospital. The prescription dose to the primary target was 70Gy in 33 fractions.Three DIR methods (B-spline, Diffeomorphic Demons and MIMvista) were used to propagate parotid structures from planning CTs to the daily CTs and accumulate fractionated dose on the planning CTs. The mean accumulated doses of parotids were quantitatively compared and the uncertainties of the propagated parotid contours were evaluated using Dice similarity index (DSI). Results: The planned mean dose of the ipsilateral parotids (32.42±3.13Gy) was slightly higher than those of the contralateral parotids (31.38±3.19Gy)in 10 patients. The difference between the accumulated mean doses of the ipsilateral parotids in the B-spline, Demons and MIMvista deformation algorithms (36.40±5.78Gy, 34.08±6.72Gy and 33.72±2.63Gy ) were statistically significant (B-spline vs Demons, P<0.0001, B-spline vs MIMvista, p =0.002). And The difference between those of the contralateral parotids in the B-spline, Demons and MIMvista deformation algorithms (34.08±4.82Gy, 32.42±4.80Gy and 33.92±4.65Gy ) were also significant (B-spline vs Demons, p =0.009, B-spline vs MIMvista, p =0.074). For the DSI analysis, the scores of B-spline, Demons and MIMvista DIRs were 0.90, 0.89 and 0.76. Conclusion: Shrinkage of parotid volumes results in the dose increase to the parotid glands in adaptive head and neck radiotherapy. The accumulated doses of parotids show significant difference using the different DIR algorithms between kVCT and MVCT. Therefore, the volume-based criterion (i.e. DSI) as a quantitative evaluation of

  20. The Dantzig Selector for Censored Linear Regression Models

    PubMed Central

    Li, Yi; Dicker, Lee; Zhao, Sihai Dave

    2013-01-01

    The Dantzig variable selector has recently emerged as a powerful tool for fitting regularized regression models. To our knowledge, most work involving the Dantzig selector has been performed with fully-observed response variables. This paper proposes a new class of adaptive Dantzig variable selectors for linear regression models when the response variable is subject to right censoring. This is motivated by a clinical study to identify genes predictive of event-free survival in newly diagnosed multiple myeloma patients. Under some mild conditions, we establish the theoretical properties of our procedures, including consistency in model selection (i.e. the right subset model will be identified with a probability tending to 1) and the optimal efficiency of estimation (i.e. the asymptotic distribution of the estimates is the same as that when the true subset model is known a priori). The practical utility of the proposed adaptive Dantzig selectors is verified via extensive simulations. We apply our new methods to the aforementioned myeloma clinical trial and identify important predictive genes. PMID:24478569