Science.gov

Sample records for adult sea scallops

  1. 50 CFR 648.59 - Sea Scallop Access Areas.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 12 2012-10-01 2012-10-01 false Sea Scallop Access Areas. 648.59 Section... Atlantic Sea Scallop Fishery § 648.59 Sea Scallop Access Areas. (a) Delmarva Sea Scallop Access Area. (1... Sea Scallop Access Area, described in paragraph (a)(2) of this section, only if the vessel...

  2. 50 CFR 648.59 - Sea Scallop Access Areas.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ..., or land scallops in or from the area known as the Closed Area II Sea Scallop Access Area, described... fish for, possess, or land scallops in or from the area known as the Nantucket Lightship Sea Scallop... 50 Wildlife and Fisheries 12 2014-10-01 2014-10-01 false Sea Scallop Access Areas. 648.59...

  3. 50 CFR 648.59 - Sea Scallop Access Areas.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 10 2011-10-01 2011-10-01 false Sea Scallop Access Areas. 648.59 Section 648.59 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC AND ATMOSPHERIC... Atlantic Sea Scallop Fishery § 648.59 Sea Scallop Access Areas. (a) Delmarva Sea Scallop Access Area....

  4. 50 CFR 648.59 - Sea Scallop Access Areas.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 12 2013-10-01 2013-10-01 false Sea Scallop Access Areas. 648.59 Section... Atlantic Sea Scallop Fishery § 648.59 Sea Scallop Access Areas. (a) (b) Closed Area I Access Area—(1) From... of the western boundary line of Closed Area I, defined in § 648.81(a)(1), that lies between...

  5. 77 FR 28311 - Fisheries of the Northeastern United States; Atlantic Sea Scallop Fishery; Closure of the...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-05-14

    ... management unit of the Atlantic sea scallop fishery ranges from the shorelines of Maine through North Carolina to the outer boundary of the Exclusive Economic Zone. The Atlantic Sea Scallop Fishery Management... United States; Atlantic Sea Scallop Fishery; Closure of the Delmarva Access Area AGENCY: National...

  6. 75 FR 63721 - Fisheries of the Northeastern United States; Atlantic Sea Scallop Fishery; Framework Adjustment...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-10-18

    ... specified in Sec. 648.52(d), outside the boundaries of a Sea Scallop Access Area by a vessel that is... United States; Atlantic Sea Scallop Fishery; Framework Adjustment 21; Correction AGENCY: National Marine... implement Framework Adjustment 21 (Framework 21) to the Atlantic Sea Scallop Fishery Management...

  7. 75 FR 22073 - Fisheries of the Northeastern United States; Atlantic Sea Scallop Fishery; Framework Adjustment 21

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-04-27

    ... Service (NMFS), National Oceanic and Atmospheric Administration (NOAA), Commerce. ACTION: Proposed rule... scallop fishery: Total allowable catch (TAC); open area days-at-sea (DAS) and Sea Scallop Access Area... minimize impacts of incidental take of sea turtles as required by the March 14, 2008, Atlantic Sea...

  8. 77 FR 52 - Fisheries of the Northeastern United States; Atlantic Sea Scallop Fishery; Framework Adjustment 23

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-01-03

    ... United States; Atlantic Sea Scallop Fishery; Framework Adjustment 23 AGENCY: National Marine Fisheries... Adjustment 23 to the Atlantic Sea Scallop Fishery Management Plan, which was developed and adopted by the New... measures to: Minimize impacts on sea turtles through the requirement of a turtle deflector dredge;...

  9. 50 CFR 648.59 - Sea Scallop Access Areas.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... limited access vessels in the Delmarva Access Area shall be based on the TAC for the access area, which... section. The 2010 Delmarva Access Area scallop TAC for limited access scallop vessels is 5,394,485 lb (2,447 mt), after accounting for applicable set-asides and LAGC IFQ TAC. (ii) LAGC IFQ scallop...

  10. 78 FR 42890 - Fisheries of the Northeastern United States; Atlantic Sea Scallop Fishery and Northeast...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-07-18

    ... United States; Atlantic Sea Scallop Fishery and Northeast Multispecies Fishery; Framework Adjustment 24 and Framework Adjustment 49; Correction AGENCY: National Marine Fisheries Service (NMFS), National... action contains corrections and clarifications to the final rule implemented through Joint...

  11. 78 FR 73499 - Proposed Information Collection; Comment Request; Atlantic Sea Scallops Amendment 10 Data Collection

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-12-06

    ... National Oceanic and Atmospheric Administration Proposed Information Collection; Comment Request; Atlantic Sea Scallops Amendment 10 Data Collection AGENCY: National Oceanic and Atmospheric Administration... for an extension of a currently approved information collection. National Marine Fisheries...

  12. 76 FR 23940 - Fisheries of the Northeastern United States; Atlantic Sea Scallop Fishery; Framework Adjustment 22

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-04-29

    ... Service (NMFS), National Oceanic and Atmospheric Administration (NOAA), Commerce. ACTION: Proposed rule... (LAGC) fleets; open area days-at-sea (DAS) and Sea Scallop Access Area (access area) trip allocations... to minimize impacts of incidental take of sea turtles as required by the March 14, 2008, Atlantic...

  13. 50 CFR 648.57 - Sea scallop area rotation program.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... development of area rotation programs is subject to the framework adjustment process specified in § 648.55... access general category scallop vessels shall be specified in § 648.59 through the framework...

  14. 50 CFR 648.57 - Sea scallop area rotation program.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... development of area rotation programs is subject to the framework adjustment process specified in § 648.55... access general category scallop vessels shall be specified in § 648.59 through the framework...

  15. 50 CFR 648.57 - Sea scallop area rotation program.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... development of area rotation programs is subject to the framework adjustment process specified in § 648.55... access general category scallop vessels shall be specified in § 648.59 through the framework...

  16. 76 FR 43773 - Fisheries of the Northeastern United States; Atlantic Sea Scallop Fishery; Framework Adjustment 22

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-07-21

    ... Adjustment 22; Final Rule #0;#0;Federal Register / Vol. 76 , No. 140 / Thursday, July 21, 2011 / Rules and... Administration (NOAA), Commerce. ACTION: Final rule. SUMMARY: NMFS is implementing measures specified in... access general category (LAGC) fleets; open area days-at-sea (DAS) and Sea Scallop Access Area...

  17. 75 FR 36559 - Fisheries of the Northeastern United States; Atlantic Sea Scallop Fishery; Framework Adjustment 21

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-06-28

    ... rule for Framework 21 published in the Federal Register on April 27, 2010, with a 15-day public comment... Service (NMFS), National Oceanic and Atmospheric Administration (NOAA), Commerce. ACTION: Final rule...: Total allowable catch (TAC); open area days-at-sea (DAS) and Sea Scallop Access Area (access area)...

  18. Meat Composition and Quality Assessment of King Scallops (Pecten maximus) and Frozen Atlantic Sea Scallops (Placopecten magellanicus) on a Retail Level

    PubMed Central

    Manthey-Karl, Monika; Lehmann, Ines; Ostermeyer, Ute; Rehbein, Hartmut; Schröder, Ute

    2015-01-01

    An enlarged range of scallop products on the market allows the consumer to buy lower priced alternatives, which often raises the question of quality and control. Frozen meat of king scallops (Pecten maximus) and Atlantic sea scallops (Placopecten magellanicus) were purchased on the German market and compared with fresh shell-on king scallops of various origin. The approximate composition, inclusive citric acid and phosphates, minerals, free amino acids (FAA) and fatty acid profiles were examined in the muscle to identify changes as a result of processing. The FAA glycine and taurine as well the fatty acids 20:5n-3 (EPA) and 22:6n-3 (DHA) were the most abundant, but were reduced in processed samples. Di- and triphosphate contents were not detectable (<0.01 g·kg−1) in untreated meats. Most frozen scallop products contained added citrates and polyphosphates and had distinctly higher water contents (up to 89%) and an increased moisture to protein ratio (M/P) (up to 9) compared with the fresh king scallops (78%, M/P < 5). Labelling of species, verified by PCR-based DNA analysis, and ingredients were not correct in each case. Overall results indicated no relevant differences in mineral content, except high sodium contents, resulting from additives. Labelling does not readily allow the consumer to recognize the extent of processing effects. PMID:28231221

  19. Species profiles: Life histories and environmental requirements of coastal fishes and invertebrates (North Atlantic): Sea scallop. [Plactopecten magellanicus

    SciTech Connect

    Mullen, D.M.; Moring, J.R.

    1986-08-01

    The sea scallop, Placopecten magellanicus, is a commercially important shellfish found from North Carolina to the Gulf of St. Lawrence in intertidal to deep waters. Scallops spawn at age 1 from July to October, releasing up to one million eggs each year. Up to 8 cm in size, scallops are active in response to disturbances, but those over 9 cm in size do not move. The US commercial fishery has been active for over 100 years, and landings in 1982 were 9700 t, valued at $78 million. Over 75% of the commercial landings of all scallops occur in New England, principally in Massachusetts. Scallops are collected by commercial dredges and scuba divers. A wide variety of animals prey on scallops, and predation by several species of fishes may increase following injuries caused by commercial dredges.

  20. 77 FR 20728 - Fisheries of the Northeastern United States; Atlantic Sea Scallop Fishery; Framework Adjustment 23

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-04-06

    ... Management Council and includes measures to: Minimize impacts on sea turtles through the requirement of a turtle deflector dredge; improve the effectiveness of the scallop fishery's accountability measures... to use a turtle deflector dredge (TDD), including where, when, and to which vessels this...

  1. Effects of fouling on the Japanese scallop Mizuhopecten yessoensis (Jay) in Peter the Great Bay (Sea of Japan)

    NASA Astrophysics Data System (ADS)

    Gabaev, D. D.

    2013-03-01

    A valuable mariculture object, the Japanese scallop Mizuhopecten (= Patinopevten) yessoensis (Jay), after six hours long transportation by air and sowing on the bottom is fouled greater by epi- and endolythical organisms than the members of the native population. It is likely that the fouling negatively affects the specimens, those that were the largest before the sowing at the bottom were not found among those that reached puberty. The results of the effects of the endolythic polychaete Polydora brevipalpa and the barnacle Hesperibalanus hesperius on the growth rate of the Japanese scallop cultivated on the bottom of Peter the Great Bay (Sea of Japan) are provided in this paper.

  2. 77 FR 73957 - Fisheries of the Northeastern United States; Atlantic Sea Scallop Fishery; Closure of the...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-12-12

    ... success of the scallop area rotational management program. The New England Fishery Management Council... biomass and yield from the ETA and the overall Mid-Atlantic area. The success of the entire scallop access... management problems in the fishery. The success of the entire scallop area rotation program, and the need...

  3. Ecological effects of co-culturing sea cucumber Apostichopus japonicus (Selenka) with scallop Chlamys farreri in earthen ponds

    NASA Astrophysics Data System (ADS)

    Ren, Yichao; Dong, Shuanglin; Qin, Chuanxin; Wang, Fang; Tian, Xiangli; Gao, Qinfeng

    2012-01-01

    Monthly changes in sedimentation and sediment properties were studied for three different culture treatments: sea cucumber monoculture (Mc), sea cucumber and scallop polyculture (Ps-c) and scallop monoculture (Ms). Results indicated that the survival rate of sea cucumber was significantly higher in Ps-c cultures than in Mc cultures. Sea cucumber yield was 69.6% higher in Ps-c culture than in Mc culture. No significant differences in body weight and scallop shell length were found between Ps-c and Ms cultures. The mean sedimentation rate of total particulate matter (TPM) was 72.2 g/(m2·d) in Ps-c cultures, with a maximum of 119.7 g/(m2·d), which was markedly higher than that of Mc (mean value). Sedimentation rates of organic matter (OM), total organic carbon (TOC), total nitrogen (TN) and total phosphorus (TP) in Ps-c cultures were also significantly higher than those in Mc cultures. TOC and TN contents of sediment increased rapidly in the first 5 months in Ms cultures and remained at a high level. TOC and TN contents in Mc and Ps-c cultures decreased during sea cucumber feeding seasons and increased during sea cucumber dormancy periods (summer and winter). The study demonstrates that co-culture of sea cucumber and scallop in earthen ponds is an alternative way to alleviate nutrient loads and improve water quality in coastal aquaculture systems. Moreover, it provides the additional benefit of an increased sea cucumber yield.

  4. An Integrated Assessment Model for Helping the United States Sea Scallop (Placopecten magellanicus) Fishery Plan Ahead for Ocean Acidification and Warming.

    PubMed

    Cooley, Sarah R; Rheuban, Jennie E; Hart, Deborah R; Luu, Victoria; Glover, David M; Hare, Jonathan A; Doney, Scott C

    2015-01-01

    Ocean acidification, the progressive change in ocean chemistry caused by uptake of atmospheric CO2, is likely to affect some marine resources negatively, including shellfish. The Atlantic sea scallop (Placopecten magellanicus) supports one of the most economically important single-species commercial fisheries in the United States. Careful management appears to be the most powerful short-term factor affecting scallop populations, but in the coming decades scallops will be increasingly influenced by global environmental changes such as ocean warming and ocean acidification. In this paper, we describe an integrated assessment model (IAM) that numerically simulates oceanographic, population dynamic, and socioeconomic relationships for the U.S. commercial sea scallop fishery. Our primary goal is to enrich resource management deliberations by offering both short- and long-term insight into the system and generating detailed policy-relevant information about the relative effects of ocean acidification, temperature rise, fishing pressure, and socioeconomic factors on the fishery using a simplified model system. Starting with relationships and data used now for sea scallop fishery management, the model adds socioeconomic decision making based on static economic theory and includes ocean biogeochemical change resulting from CO2 emissions. The model skillfully reproduces scallop population dynamics, market dynamics, and seawater carbonate chemistry since 2000. It indicates sea scallop harvests could decline substantially by 2050 under RCP 8.5 CO2 emissions and current harvest rules, assuming that ocean acidification affects P. magellanicus by decreasing recruitment and slowing growth, and that ocean warming increases growth. Future work will explore different economic and management scenarios and test how potential impacts of ocean acidification on other scallop biological parameters may influence the social-ecological system. Future empirical work on the effect of ocean

  5. An Integrated Assessment Model for Helping the United States Sea Scallop (Placopecten magellanicus) Fishery Plan Ahead for Ocean Acidification and Warming

    PubMed Central

    2015-01-01

    Ocean acidification, the progressive change in ocean chemistry caused by uptake of atmospheric CO2, is likely to affect some marine resources negatively, including shellfish. The Atlantic sea scallop (Placopecten magellanicus) supports one of the most economically important single-species commercial fisheries in the United States. Careful management appears to be the most powerful short-term factor affecting scallop populations, but in the coming decades scallops will be increasingly influenced by global environmental changes such as ocean warming and ocean acidification. In this paper, we describe an integrated assessment model (IAM) that numerically simulates oceanographic, population dynamic, and socioeconomic relationships for the U.S. commercial sea scallop fishery. Our primary goal is to enrich resource management deliberations by offering both short- and long-term insight into the system and generating detailed policy-relevant information about the relative effects of ocean acidification, temperature rise, fishing pressure, and socioeconomic factors on the fishery using a simplified model system. Starting with relationships and data used now for sea scallop fishery management, the model adds socioeconomic decision making based on static economic theory and includes ocean biogeochemical change resulting from CO2 emissions. The model skillfully reproduces scallop population dynamics, market dynamics, and seawater carbonate chemistry since 2000. It indicates sea scallop harvests could decline substantially by 2050 under RCP 8.5 CO2 emissions and current harvest rules, assuming that ocean acidification affects P. magellanicus by decreasing recruitment and slowing growth, and that ocean warming increases growth. Future work will explore different economic and management scenarios and test how potential impacts of ocean acidification on other scallop biological parameters may influence the social-ecological system. Future empirical work on the effect of ocean

  6. 50 CFR 648.60 - Sea scallop area access program requirements.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... § 648.23(b). (i) Reallocation of trips into open areas. If the yellowtail flounder TAC allocated for a...). (ii) NE multispecies possession limits and yellowtail flounder TACs. A limited access scallop vessel... specified under § 648.83(a)(1). (1) Scallop Access Area TAC Availability. After declaring a trip into...

  7. 75 FR 55304 - Proposed Information Collection; Comment Request; Atlantic Sea Scallops Amendment 10 Data Collection

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-09-10

    ... Internet at dHynek@doc.gov ). FOR FURTHER INFORMATION CONTACT: Requests for additional information or... permit history applications for IFQ, Northern Gulf of Maine (NGOM), and Incidental Catch (IC) scallop... replacement, upgrade and permit history applications, 3 hours; VMS pre- ] landing notification form, 5...

  8. 50 CFR 648.62 - Northern Gulf of Maine (NGOM) scallop management area.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... Management Measures for the Atlantic Sea Scallop Fishery § 648.62 Northern Gulf of Maine (NGOM) scallop... boundaries of the Gulf of Maine Scallop Dredge Exemption Area as specified in § 648.80(a)(11). To fish for...

  9. 50 CFR 648.62 - Northern Gulf of Maine (NGOM) scallop management area.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... Management Measures for the Atlantic Sea Scallop Fishery § 648.62 Northern Gulf of Maine (NGOM) scallop... boundaries of the Gulf of Maine Scallop Dredge Exemption Area as specified in § 648.80(a)(11). To fish for or... vessel issued a scallop permit pursuant to § 648.4(a)(2) may possess, retain, or land scallops in...

  10. Seasonal variation in biomarkers in blue mussel (Mytilus edulis), Icelandic scallop (Chlamys islandica) and Atlantic cod (Gadus morhua): implications for environmental monitoring in the Barents Sea.

    PubMed

    Nahrgang, J; Brooks, S J; Evenset, A; Camus, L; Jonsson, M; Smith, T J; Lukina, J; Frantzen, M; Giarratano, E; Renaud, P E

    2013-02-01

    In the Barents Sea, the limited data on biological relevant indicators and their responses to various anthropogenic stressors have hindered the development of a consistent scientific basis for selecting indicator species and developing practical procedures for environmental monitoring. Accordingly, the main aim of the present study was to develop a common set of baseline values for contaminants and biomarkers in three species, and to identify their strengths and limitations in monitoring of the Barents Sea. Blue mussel (Mytilus edulis), Icelandic scallop (Chlamys islandica) and Atlantic cod (Gadus morhua) were sampled from a north Norwegian fjord in March, June, September and December 2010. Digestive glands from the bivalve species and liver from Atlantic cod were analysed for biomarkers of oxidative stress (catalase [CAT], glutathione peroxidase [GPX], glutathione-S-transferase activities [GST], lipid peroxidation as thiobarbituric reactive substances [TBARS] and total oxyradical scavenging capacity [TOSC]), biotransformation (ethoxyresorufine-O-deethylase activity [EROD]) and general stress (lysosomal membrane stability [LMS]). Concentrations of polycyclic aromatic hydrocarbons (PAHs) and metals in the bivalves and PAH metabolites in fish bile were quantified. Finally, energy reserves (total lipids, proteins and carbohydrates) and electron transport system (ETS) activity in the digestive gland of the bivalves and liver of Atlantic cod provided background information for reproductive cycle and general physiological status of the organisms. Blue mussel and Icelandic scallop showed very similar trends in biological cycle, biomarker expression and seasonality. Biomarker baselines in Atlantic cod showed weaker seasonal variability. However, important biological events may have been undetected due to the large time intervals between sampling occasions. Physiological biomarkers such as energy reserves and ETS activity were recommended as complementary parameters to the

  11. Seasonal variations of phytoplankton assemblages and its relation to environmental variables in a scallop culture sea area of Bohai Bay, China.

    PubMed

    Chen, Yang-Hang; Gao, Ya-Hui; Chen, Chang-Ping; Liang, Jun-Rong; Sun, Lin; Zhen, Yu; Qiao, Ling

    2016-12-15

    Seasonal variations of phytoplankton assemblages were examined in a scallop culture sea area of Bohai Bay (China) with regard to some major physical and chemical variables. Samples were collected at three stations from July 2011 to September 2013. A total of 134 species belong to 4 phyla were identified, of which 104 were diatoms, 27 were dinoflagellates, 1 was euglenophyte and 2 were chrysophytes. The cells abundance in autumn (55.44×10(3)cells/L) was higher than that in summer (6.99×10(3)cells/L), spring (3.46×10(3)cells/L) and winter (2.69×10(3)cells/L). The Shannon-Wiener diversity index was higher in summer (3.06), followed by spring (3.02) and winter (2.91), and low in autumn (1.40). Results of canonical correspondence analysis showed that phosphate, salinity, temperature, silicate and DIN/SiO2 ratio were the most important environmental factors influencing the variation of phytoplankton community structure. It is suggested that eutrophication resulted from scallop culture would cause a potential red tide risk.

  12. Mixed effects of elevated pCO2 on fertilisation, larval and juvenile development and adult responses in the mobile subtidal scallop Mimachlamys asperrima (Lamarck, 1819).

    PubMed

    Scanes, Elliot; Parker, Laura M; O'Connor, Wayne A; Ross, Pauline M

    2014-01-01

    Ocean acidification is predicted to have severe consequences for calcifying marine organisms especially molluscs. Recent studies, however, have found that molluscs in marine environments with naturally elevated or fluctuating CO2 or with an active, high metabolic rate lifestyle may have a capacity to acclimate and be resilient to exposures of elevated environmental pCO2. The aim of this study was to determine the effects of near future concentrations of elevated pCO2 on the larval and adult stages of the mobile doughboy scallop, Mimachlamys asperrima from a subtidal and stable physio-chemical environment. It was found that fertilisation and the shell length of early larval stages of M. asperrima decreased as pCO2 increased, however, there were less pronounced effects of elevated pCO2 on the shell length of later larval stages, with high pCO2 enhancing growth in some instances. Byssal attachment and condition index of adult M. asperrima decreased with elevated pCO2, while in contrast there was no effect on standard metabolic rate or pHe. The responses of larval and adult M. asperrima to elevated pCO2 measured in this study were more moderate than responses previously reported for intertidal oysters and mussels. Even this more moderate set of responses are still likely to reduce the abundance of M. asperrima and potentially other scallop species in the world's oceans at predicted future pCO2 levels.

  13. Mixed Effects of Elevated pCO2 on Fertilisation, Larval and Juvenile Development and Adult Responses in the Mobile Subtidal Scallop Mimachlamys asperrima (Lamarck, 1819)

    PubMed Central

    Scanes, Elliot; Parker, Laura M.; O’Connor, Wayne A.; Ross, Pauline M.

    2014-01-01

    Ocean acidification is predicted to have severe consequences for calcifying marine organisms especially molluscs. Recent studies, however, have found that molluscs in marine environments with naturally elevated or fluctuating CO2 or with an active, high metabolic rate lifestyle may have a capacity to acclimate and be resilient to exposures of elevated environmental pCO2. The aim of this study was to determine the effects of near future concentrations of elevated pCO2 on the larval and adult stages of the mobile doughboy scallop, Mimachlamys asperrima from a subtidal and stable physio-chemical environment. It was found that fertilisation and the shell length of early larval stages of M. asperrima decreased as pCO2 increased, however, there were less pronounced effects of elevated pCO2 on the shell length of later larval stages, with high pCO2 enhancing growth in some instances. Byssal attachment and condition index of adult M. asperrima decreased with elevated pCO2, while in contrast there was no effect on standard metabolic rate or pHe. The responses of larval and adult M. asperrima to elevated pCO2 measured in this study were more moderate than responses previously reported for intertidal oysters and mussels. Even this more moderate set of responses are still likely to reduce the abundance of M. asperrima and potentially other scallop species in the world’s oceans at predicted future pCO2 levels. PMID:24733125

  14. Molecular characterization of Myostatin gene from Zhikong scallop Chlamys farreri (Jones et Preston 1904).

    PubMed

    Hu, Xiaoli; Guo, Huihui; He, Yan; Wang, Shan; Zhang, Lingling; Wang, Shi; Huang, Xiaoting; Roy, Scott William; Lu, Wei; Hu, Jingjie; Bao, Zhenmin

    2010-01-01

    The scallop is an economically important sea food prized for its large and delicious adductor muscle. Studying the molecular basis of scallop muscle growth is important for both scallop breeding and our understanding of muscle mass regulation in bivalve. Myostatin (MSTN) is a conserved negative regulator of muscle growth and development. Here we report the MSTN gene from Zhikong scallop (Chlamys farreri Jones et Preston 1904). The C. farreri MSTN consists of 11651 nucleotides encoding 457 amino acids. The gene has a 3-exon/2-intron structure that is conserved with vertebrate homologs. The exons are 586, 380 and 408 bp in length, respectively, and separated by introns of 5086 and 1518 bp. The protein sequence contains characteristic conserved residues including a cleavage motif of proteolysis (RXXR) and nine cysteines. Three transcription initiation sites were found at 62, 146, and 296 bp upstream of the translation start codon ATG. In silico analysis of the promoter region identified a TATA-box and several muscle-specific regulatory elements including COMP, MEF2s, MTBFs and E-boxes. Minisatellite DNA was found in intron 1. By fluorescence in situ hybridization (FISH), the gene was mapped to the long arm of a pair of middle subtelocentric chromosome. Quantitative analysis of MSTN transcripts in embryos/larvae indicated high expression level in gastrulae and limited expression at other stages. In adult scallops, MSTN is predominantly expressed in striated muscle, with different expression levels in other tissues. Our data provide valuable genomic and expression information which will aid the further study on scallop MSTN function and MSTN evolution.

  15. Association of myostatin variants with growth traits of Zhikong scallop ( Chlamys farreri)

    NASA Astrophysics Data System (ADS)

    Fu, Qiang; Guo, Huihui; Feng, Liying; Li, Xue; Zhang, Lingling; Wang, Shi; Hu, Xiaoli; Bao, Zhenmin

    2016-02-01

    Scallop is a popular sea food and an important aquaculture shellfish. Identification of genes and genetic variants relating to scallop growth could benefit high-yielding scallop breeding. Myostatin ( MSTN) is a conservative regulator of muscle growth, and has become one of the most important target genes for genetic improvement of the production of farmed animals. In this study, four single nucleotide polymorphisms (SNPs) were identified in the 5' flanking region of MSTN gene ( CfMSTN) in Zhikong scallop ( Chlamys farreri). The association of these SNPs with scallop growth traits, including shell length, shell height, body weight and striated muscle weight was analyzed. The SNP g-1162Gscallops showed significantly higher trait values than those of GT type, and the GG type individuals exhibited median values. On the contrary, significantly more CfMSTN transcripts were detected in the striated muscle of GT type scallops than in those of TT and GG type ones. Our results suggested that CfMSTN might regulate the scallop muscle growth negatively, and SNP g-1162Gscallop.

  16. An SCD gene from the Mollusca and its upregulation in carotenoid-enriched scallops.

    PubMed

    Li, Xue; Ning, Xianhui; Dou, Jinzhuang; Yu, Qian; Wang, Shuyue; Zhang, Lingling; Wang, Shi; Hu, Xiaoli; Bao, Zhenmin

    2015-06-10

    Carotenoids are a diverse group of red, orange, and yellow pigments that act as vitamin A precursors and antioxidants. Animals can only obtain carotenoids through their diets. Amongst the carotenoids identified in nature, over one third are of marine origin, but current research on carotenoid absorption in marine species is limited. Bivalves possess an adductor muscle, which is normally white in scallops. However, a new variety of Yesso scallop (Patinopecten yessoensis), the 'Haida golden scallop', can be distinguished by its adductor muscle's orange colour, which is caused by carotenoid accumulation. Studying the genes related to carotenoid accumulation in this scallop could benefit our understanding of the mechanisms underlying carotenoid absorption in marine organisms, and it could further improve scallop breeding for carotenoid content. Stearoyl-CoA desaturase (SCD) is the rate-limiting enzyme in the production of monounsaturated fatty acids, which enhance carotenoid absorption. Here, the full-length cDNA and genomic DNA sequences of the SCD gene from the Yesso scallop (PySCD) were obtained. The PySCD gene consisted of four exons and three introns, and it contained a 990-bp open reading frame encoding 329 amino acids. It was ubiquitously expressed in adult tissues, embryos and larvae of both white Yesso scallops and 'Haida golden' scallops. Although the expression pattern of PySCD in both types of scallops was similar, significantly more PySCD transcripts were detected in the 'Haida golden' scallops than in the white scallops. Elevated PySCD expression was found in tissues including the adductor muscle, digestive gland, and gonad, as well as in veliger larvae. This study represents the first characterisation of an SCD gene from the Mollusca. Our data imply that PySCD functions in multiple biological processes, and it might be involved in carotenoid accumulation.

  17. Fine-scale population genetic structure of Zhikong scallop (Chlamys farreri): do local marine currents drive geographical differentiation?

    PubMed

    Zhan, Aibin; Hu, Jingjie; Hu, Xiaoli; Zhou, Zunchun; Hui, Min; Wang, Shi; Peng, Wei; Wang, Mingling; Bao, Zhenmin

    2009-01-01

    Marine scallops, with extended planktonic larval stages which can potentially disperse over large distances when advected by marine currents, are expected to possess low geographical differentiation. However, the sessile lifestyle as adult tends to form discrete "sea beds" with unique population dynamics and structure. The narrow distribution of Zhikong scallop (Chlamys farreri), its long planktonic larval stage, and the extremely hydrographic complexity in its distribution range provide an interesting case to elucidate the impact of marine currents on geographical differentiation for marine bivalves at a fine geographical scale. In this study, we analyzed genetic variation at nine microsatellite DNA loci in six locations throughout the distribution of Zhikong scallop in the Northern China. Very high genetic diversity was present in all six populations. Two populations sampled from the same marine gyre had no detectable genetic differentiation (F (ST) = 0.0013); however, the remaining four populations collected from different marine gyres or separated by strong marine currents showed low but significant genetic differentiation (F (ST) range 0.0184-0.0602). Genetic differentiation was further analyzed using the Monmonier algorithm to identify genetic barriers and using the assignment test conducted by software GeneClass2 to ascertain population membership of individuals. The genetic barriers fitting the orientation of marine gyres/currents were clearly identified, and the individual assignment analysis indicated that 95.6% of specimens were correctly allocated to one of the six populations sampled. The results support the hypothesis that significant population structure is present in Zhikong scallop at a fine geographical scale, and marine currents can be responsible for the genetic differentiation.

  18. 50 CFR 648.56 - Scallop research.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 50 Wildlife and Fisheries 8 2010-10-01 2010-10-01 false Scallop research. 648.56 Section 648.56... Scallop Fishery § 648.56 Scallop research. (a) Annually, the Council and NMFS shall prepare and issue a Request for Proposals (RFP) that identifies research priorities for projects to be conducted by...

  19. 50 CFR 648.56 - Scallop research.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 10 2011-10-01 2011-10-01 false Scallop research. 648.56 Section 648.56... Scallop Fishery § 648.56 Scallop research. (a) At least biennially, in association with the biennial... Opportunity (FFO) that identifies research priorities for projects to be conducted by vessels using...

  20. 50 CFR 648.56 - Scallop research.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 12 2014-10-01 2014-10-01 false Scallop research. 648.56 Section 648.56... Scallop Fishery § 648.56 Scallop research. (a) At least biennially, in association with the biennial... Opportunity (FFO) that identifies research priorities for projects to be conducted by vessels using...

  1. 50 CFR 648.56 - Scallop research.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 12 2013-10-01 2013-10-01 false Scallop research. 648.56 Section 648.56... Scallop Fishery § 648.56 Scallop research. (a) At least biennially, in association with the biennial... Opportunity (FFO) that identifies research priorities for projects to be conducted by vessels using...

  2. Yield trait improvement of bay scallops following complete diallel crosses between different scallop stocks

    NASA Astrophysics Data System (ADS)

    Zhang, Shoudu; Li, Li; Wu, Fucun; Zhang, Guofan

    2014-01-01

    This study describes the complete diallel hybridization between newly introduced bay scallop stock (W) from Canada and local commercial stock (D) grown under laboratory conditions, in China. Larval survival and growth during all life stages (larvae, spat, and adult) were compared among hybrid (DW, WD) and purebred (DD, WW) populations. Significant heterosis was detected for survival during the larval stage (>1% of the mid-parent values). The mean heterosis ( H m) varied in growth throughout the life span. More than 50% of the H m values were positive and negative in the DW and WD groups, respectively. The influence of maternal effects and mating types (intrapopulation vs. interpopulation crosses) on growth for all life stages was not consistent. Larval survival did not differ significantly ( P>0.05) with maternal effect or mating type. In the harvest stage, shell length (SL), shell height (SH), shell width (SW), and total weight (TW) were larger in the hybrid compared with the inbred groups. Positive H m values were observed in SL (1.5%), SW (5.8%), and TW (12.3%), and were more significant in the DW groups (6.1%, 4.5%, 6.8%, and 27.2%). These results suggest that hybridization between two geographic populations is a good tool for improving bay scallop growth. However, unstable heterosis between the two populations requires further study.

  3. JUVENILE BAY SCALLOP (ARGOPECTEN IRRADIANS) HABITAT PREFERENCES

    EPA Science Inventory

    Habitat quality and quantity are known to be important for maintaining populations of bay scallops (Argopecten irradians), but data linking habitat attributes to bay scallop populations are lacking. This information is essential to understand the role of habitat alteration in th...

  4. Hydrolysates from scallop and squid processing byproducts as specialty aquafeed ingredients

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Around 9,000 MT of squid (Loligo pealei) is landed annually in Rhode Island, USA, most of which is processed resulting in 40-50% unutilized byproducts (about 3,500 MT). On the other hand, the sea scallop (Placopecten magellanicus) resource off New England is currently at historic high levels of 22,7...

  5. The activity of the Drosophila Vestigial protein is modified by Scalloped-dependent phosphorylation.

    PubMed

    Pimmett, Virginia L; Deng, Hua; Haskins, Julie A; Mercier, Rebecca J; LaPointe, Paul; Simmonds, Andrew J

    2017-03-18

    The Drosophila vestigial gene is required for proliferation and differentiation of the adult wing and for differentiation of larval and adult muscle identity. Vestigial is part of a multi-protein transcription factor complex, which includes Scalloped, a TEAD-class DNA binding protein. Binding Scalloped is necessary for translocation of Vestigial into the nucleus. We show that Vestigial is extensively post-translationally modified and at least one of these modifications is required for proper function during development. We have shown that there is p38-dependent phosphorylation of Serine 215 in the carboxyl-terminal region of Vestigial. Phosphorylation of Serine 215 occurs in the nucleus and requires the presence of Scalloped. Comparison of a phosphomimetic and non-phosphorylatable mutant forms of Vestigial shows differences in the ability to rescue the wing and muscle phenotypes associated with a null vestigial allele.

  6. Population Dynamics and Parasite Load of a Foraminifer on Its Antarctic Scallop Host with Their Carbonate Biomass Contributions

    PubMed Central

    Pérez-Huerta, Alberto; Bowser, Samuel S.

    2015-01-01

    We studied the population dynamics and parasite load of the foraminifer Cibicides antarcticus on its host the Antarctic scallop Adamussium colbecki from three localities differing by sea ice cover within western McMurdo Sound, Ross Sea, Antarctica: Explorers Cove, Bay of Sails and Herbertson Glacier. We also estimated CaCO3 biomass and annual production for both species. Cibicides populations varied by locality, valve type, and depth. Explorers Cove with multiannual sea ice had larger populations than the two annual sea ice localities, likely related to differences in nutrients. Populations were higher on Adamussium top valves, a surface that is elevated above the sediment. Depth did not affect Cibicides distributions except at Bay of Sails. Cibicides parasite load (the number of complete boreholes in Adamussium valves) varied by locality between 2% and 50%. For most localities the parasite load was < 20%, contrary to a previous report that ~50% of Cibicides were parasitic. The highest and lowest parasite load occurred at annual sea ice localities, suggesting that sea ice condition is not important. Rather, the number of adults that are parasitic could account for these differences. Cibicides bioerosion traces were categorized into four ontogenetic stages, ranging from newly attached recruits to parasitic adults. These traces provide an excellent proxy for population structure, revealing that Explorers Cove had a younger population than Bay of Sails. Both species are important producers of CaCO3. Cibicides CaCO3 biomass averaged 47-73 kg ha-1 and Adamussium averaged 4987-6806 kg ha-1 by locality. Annual production rates were much higher. Moreover, Cibicides represents 1.0-2.3% of the total host-parasite CaCO3 biomass. Despite living in the coldest waters on Earth, these species can contribute a substantial amount of CaCO3 to the Ross Sea and need to be incorporated into food webs, ecosystem models, and carbonate budgets for Antarctica. PMID:26186724

  7. Spectral sensitivity of the concave mirror eyes of scallops: potential influences of habitat, self-screening and longitudinal chromatic aberration.

    PubMed

    Speiser, Daniel I; Loew, Ellis R; Johnsen, Sönke

    2011-02-01

    Scallop eyes contain two retinas, one proximal and one distal. Molecular evidence suggests that each retina expresses a different visual pigment. To test whether these retinas have different spectral sensitivities, we used microspectrophotometry to measure the absorption spectra of photoreceptors from the eyes of two different scallop species. Photoreceptors from the proximal and distal retinas of the sea scallop Placopecten magellanicus had absorption peak wavelengths (λ(max)) of 488 ± 1 nm (mean ± s.e.m.; N=20) and 513 ± 3 nm (N=26), respectively. Photoreceptors from the corresponding retinas of the bay scallop Argopecten irradians had λ(max) values of 506 ± 1 nm (N=21) and 535 ± 3 nm (N=14). Assuming that the proximal and distal receptors had equal absorption coefficients (k(D)=0.0067 microm(-1)), we found that self-screening within the scallop eye caused the proximal and distal receptors in P. magellanicus to have peak absorption at 490 and 520 nm, respectively, and the corresponding receptors in A. irradians to have peak absorption at 504 and 549 nm. We conclude that environment may influence the λ(max) of scallop visual pigments: P. magellanicus, generally found in blue oceanic water, has visual pigments that are maximally sensitive to shorter wavelengths than those found in A. irradians, which lives in greener inshore water. Scallop distal retinas may be sensitive to longer wavelengths of light than scallop proximal retinas to correct for either self-screening by the retinas or longitudinal chromatic aberration of the lens.

  8. Restoration Lessons Learned from Bay Scallop Habitat Models

    EPA Science Inventory

    Habitat quality and quantity are important factors to consider when restoring bay scallop (Argopecten irradians) populations; however, data linking habitat attributes to bay scallop populations are lacking. This information is essential to guide restoration efforts to reverse sc...

  9. Is Sexual Size Dimorphism Inherent in the Scallop Patinopecten yessoensis?

    PubMed Central

    Silina, Alla V.

    2016-01-01

    Studies on sexual size dimorphism in Pectinidae are limited. This work deals with the mobile long-lived scallop Patinopecten yessoensis, a common (fished and cultured) species in the subtidal benthos of the Sea of Japan. A previously developed method of age determination in P. yessoensis allowed me to compare the parameters of same aged males and females in scallop populations. The shell growth rates and sizes of both sexes were similar; therefore, it was only possible to visually identify the sex of live specimens during the breeding period (May-June). Statistical analyses showed female-biased dimorphism in the gonad weight for age groups that are >4 years old. Gonad weight (in the prespawning period) increased with age, until a threshold age was attained, which varied between populations; and then gonad weight remained virtually unchanged. The fecundity advantage hypothesis for P. yessoensis with group mating and external fertilization is at least partly realized by physiological mechanisms, which cause older females to have larger gonads than those of same aged males in the population in order to produce a larger brood. Gregarious settlement of this bivalve contributes to the reproductive success of the population so that the energetically costly ovaries may all be fertilized. PMID:27293980

  10. Yorkie and Scalloped: partners in growth activation.

    PubMed

    Bandura, Jennifer L; Edgar, Bruce A

    2008-03-01

    The Hippo (Hpo) signaling pathway limits organ growth in organisms from Drosophila to mammals by suppressing the activity of the transcriptional coactivator Yorkie (Yki)/YAP. The TEAD/TEF factor Scalloped (Sd) has been identified as the first known transcription factor to partner with Yki as a downstream target of Hpo signaling.

  11. Scallops, Whelks, and Process Skills.

    ERIC Educational Resources Information Center

    Cleare, Catherine C.

    1985-01-01

    Outlines activities for each of eight science process skills (observing, using space/time relationships, classifying, using numbers, measuring, communicating, predicting, and inferring). Directions for the activities (all of which use sea shells) are included. (DH)

  12. Characterization of antibacterial nanoparticles from the scallop, Ptinopecten yessoensis.

    PubMed

    Jeong, Mi Suk; Park, Jeong Soon; Song, Seong Hwan; Jang, Se Bok

    2007-09-01

    To develop a new drug delivery system, antibacterial 50-900 nm nanoparticles of shell and internal organs from scallops collected off Huksan-Island, Korea, were prepared by dry grind technology respectively. The diameters, identities, and conformations of the scallop shell and internal organ particles were determined with a particle-size analyzer and by X-ray powder diffraction (XRD), scanning electron microscopy (SEM), and Raman spectroscopy. The antibacterial properties of the nanoparticles from scallop shell were investigated in the absence and the presence of scallop-shell extract. Bacterial growth was reduced with the supernatant of the nanoparticle scallop-shell extract. Also, the nanoparticles from scallop shell were much more effective as a skin softener than was powder. These facts provide us with guidelines for the study of the size-dependent properties of functional materials as well as for further applications to drug delivery systems (DDSs) and cosmetic raw materials.

  13. Crystal Structure of a Phosphorylated Light Chain Domain of Scallop Smooth-Muscle Myosin

    SciTech Connect

    Kumar, V.S.; Robinson, H.; O-Neall-Hennessey, E.; Reshetnikova, L.; Brown, J. H.; Szent-Gyorgyi, A. G.; Cohen, C.

    2011-11-02

    We have determined the crystal structure of a phosphorylated smooth-muscle myosin light chain domain (LCD). This reconstituted LCD is of a sea scallop catch muscle myosin with its phosphorylatable regulatory light chain (RLC SmoA). In the crystal structure, Arg{sup 16}, an arginine residue that is present in this isoform but not in vertebrate smooth-muscle RLC, stabilizes the phosphorylation site. This arginine interacts with the carbonyl group of the phosphorylation-site serine in the unphosphorylated LCD (determined previously), and with the phosphate group when the serine is phosphorylated. However, the overall conformation of the LCD is essentially unchanged upon phosphorylation. This result provides additional evidence that phosphorylation of the RLC is unlikely to act as an on-switch in regulation of scallop catch muscle myosin.

  14. Physical Mechanisms of Glaze Ice Scallop Formations on Swept Wings

    NASA Technical Reports Server (NTRS)

    Vargas, Mario; Reshotko, Eli

    1998-01-01

    An experiment was conducted to understand the physical mechanisms that lead to the formation of scallops on swept wings. Icing runs were performed on a NACA 0012 swept wing tip at 45 deg, 30 deg, and 15 deg sweep angles. A baseline case was chosen and direct measurements of scallop height and spacing, castings, video data and close-up photographic data were obtained. The results showed the scallops are made of glaze ice feathers that grow from roughness elements that have reached a minimum height and are located beyond a given distance from the attachment line. This distance depends on tunnel conditions and sweep angle, and is the critical parameter in the formation of scallops. It determines if complete scallops, incomplete scallops or no scallops are going to be formed. The mechanisms of growth for complete and incomplete scallops were identified. The effect of velocity, temperature and LWC on scallop formation was studied. The possibility that cross flow instability may be the physical mechanism that triggers the growth of roughness elements into glaze ice feathers is examined.

  15. Vertebral scalloping in neurofibromatosis type 1: a quantitative approach

    PubMed Central

    Kwok, Edmund S.H.; Sawatzky, Bonita; Birch, Patricia; Friedman, Jan M.; Tredwell, Stephen J.

    2002-01-01

    Objective To investigate quantitative differences in vertebral scalloping between children who have scoliosis with and without neurofibromatosis type 1 (NF1). Design A retrospective study. Setting A university-affiliated children’s hospital. Patients Twenty-seven children with scoliosis, 13 of whom had NF1 and 14 of whom did not. Method Existing radiographs of the lumbar vertebrae were used to measure and compare the degree of vertebral scalloping. Main outcome measures The distribution of posterior scalloping ratios in the 2 groups and the most extreme ratio in each subject in each group were compared. Results Scalloping ratios from the children with NF1 were not normally distributed: 31% had ratios greater than 1.20. Scalloping ratios from the non-NF1 children were normally distributed, with a mean ratio (and standard deviation) of 1.13 (0.03). The distribution between the 2 groups was significantly different (p < 0.05). Conclusions In children who have scoliosis but no NF1 there was a range of mild scalloping whereas those with NF1 has severe scalloping. Further studies are needed to determine the possible role of vertebral scalloping in scoliosis severity and progression in children who have NF1. PMID:12067169

  16. A synthesized mating pheromone component increases adult sea lamprey (Petromyzon marinus) trap capture in management scenarios

    USGS Publications Warehouse

    Johnson, Nicholas S.; Siefkes, Michael J.; Wagner, C. Michael; Dawson, Heather; Wang, Huiyong; Steeves, Todd; Twohey, Michael; Li, Weiming

    2013-01-01

    Application of chemical cues to manipulate adult sea lamprey (Petromyzon marinus) behavior is among the options considered for new sea lamprey control techniques in the Laurentian Great Lakes. A male mating pheromone component, 7a,12a,24-trihydroxy-3-one-5a-cholan-24-sulfate (3kPZS), lures ovulated female sea lamprey upstream into baited traps in experimental contexts with no odorant competition. A critical knowledge gap is whether this single pheromone component influences adult sea lamprey behavior in management contexts containing free-ranging sea lampreys. A solution of 3kPZS to reach a final in-stream concentration of 10-12 mol·L-1 was applied to eight Michigan streams at existing sea lamprey traps over 3 years, and catch rates were compared between paired 3kPZS-baited and unbaited traps. 3kPZS-baited traps captured significantly more sexually immature and mature sea lampreys, and overall yearly trapping efficiency within a stream averaged 10% higher during years when 3kPZS was applied. Video analysis of a trap funnel showed that the likelihood of sea lamprey trap entry after trap encounter was higher when the trap was 3kPZS baited. Our approach serves as a model for the development of similar control tools for sea lamprey and other aquatic invaders.

  17. A Vestigial:Scalloped TEA domain chimera rescues the wing phenotype of a scalloped mutation in Drosophila melanogaster.

    PubMed

    Srivastava, Ajay; MacKay, Julie O; Bell, John B

    2002-05-01

    The development of the Drosophila wing requires both scalloped and vestigial functions. Using a fusion between full-length Vestigial and the Scalloped TEA domain, the fusion protein can rescue scalloped wing mutations because within wing development, Scalloped and Vestigial cooperatively act as a transcription complex. Scalloped provides the necessary DNA binding function via the TEA domain and Vestigial promotes the activation of target genes. We also demonstrate that the putative nuclear localization signal contained in the TEA domain of Scalloped is likely responsible for the nuclear localization of Vestigial. The fusion protein is also capable of activating a known target gene of the native complex and thus represents a tool that will be helpful in rapidly identifying target genes of the Sd/Vg complex that are involved in wing differentiation. The functionality of the fusion suggests that only the TEA domain of Scalloped is critical for wing development and the rest of the protein (about 70%) is dispensable. This result is novel and should stimulate further studies of sd in other tissues in view of the fact that scalloped is a vital gene in Drosophila.

  18. Habituation of adult sea lamprey repeatedly exposed to damage-released alarm and predator cues

    USGS Publications Warehouse

    Imre, Istvan; Di Rocco, Richard T.; Brown, Grant E.; Johnson, Nicholas

    2016-01-01

    Predation is an unforgiving selective pressure affecting the life history, morphology and behaviour of prey organisms. Selection should favour organisms that have the ability to correctly assess the information content of alarm cues. This study investigated whether adult sea lamprey Petromyzon marinus habituate to conspecific damage-released alarm cues (fresh and decayed sea lamprey extract), a heterospecific damage-released alarm cue (white sucker Catostomus commersoniiextract), predator cues (Northern water snake Nerodia sipedon washing, human saliva and 2-phenylethylamine hydrochloride (PEA HCl)) and a conspecific damage-released alarm cue and predator cue combination (fresh sea lamprey extract and human saliva) after they were pre-exposed 4 times or 8 times, respectively, to a given stimulus the previous night. Consistent with our prediction, adult sea lamprey maintained an avoidance response to conspecific damage-released alarm cues (fresh and decayed sea lamprey extract), a predator cue presented at high relative concentration (PEA HCl) and a conspecific damage-released alarm cue and predator cue combination (fresh sea lamprey extract plus human saliva), irrespective of previous exposure level. As expected, adult sea lamprey habituated to a sympatric heterospecific damage-released alarm cue (white sucker extract) and a predator cue presented at lower relative concentration (human saliva). Adult sea lamprey did not show any avoidance of the Northern water snake washing and the Amazon sailfin catfish extract (heterospecific control). This study suggests that conspecific damage-released alarm cues and PEA HCl present the best options as natural repellents in an integrated management program aimed at controlling the abundance of sea lamprey in the Laurentian Great Lakes.

  19. Steady as He Goes: At-Sea Movement of Adult Male Australian Sea Lions in a Dynamic Marine Environment

    PubMed Central

    Lowther, Andrew D.; Harcourt, Robert G.; Page, Bradley; Goldsworthy, Simon D.

    2013-01-01

    The southern coastline of Australia forms part of the worlds' only northern boundary current system. The Bonney Upwelling occurs every austral summer along the south-eastern South Australian coastline, a region that hosts over 80% of the worlds population of an endangered endemic otariid, the Australian sea lion. We present the first data on the movement characteristics and foraging behaviour of adult male Australian sea lions across their South Australian range. Synthesizing telemetric, oceanographic and isotopic datasets collected from seven individuals enabled us to characterise individual foraging behaviour over an approximate two year time period. Data suggested seasonal variability in stable carbon and nitrogen isotopes that could not be otherwise explained by changes in animal movement patterns. Similarly, animals did not change their foraging patterns despite fine-scale spatial and temporal variability of the upwelling event. Individual males tended to return to the same colony at which they were tagged and utilized the same at-sea regions for foraging irrespective of oceanographic conditions or time of year. Our study contrasts current general assumptions that male otariid life history strategies should result in greater dispersal, with adult male Australian sea lions displaying central place foraging behaviour similar to males of other otariid species in the region. PMID:24086338

  20. Steady as he goes: at-sea movement of adult male Australian sea lions in a dynamic marine environment.

    PubMed

    Lowther, Andrew D; Harcourt, Robert G; Page, Bradley; Goldsworthy, Simon D

    2013-01-01

    The southern coastline of Australia forms part of the worlds' only northern boundary current system. The Bonney Upwelling occurs every austral summer along the south-eastern South Australian coastline, a region that hosts over 80% of the worlds population of an endangered endemic otariid, the Australian sea lion. We present the first data on the movement characteristics and foraging behaviour of adult male Australian sea lions across their South Australian range. Synthesizing telemetric, oceanographic and isotopic datasets collected from seven individuals enabled us to characterise individual foraging behaviour over an approximate two year time period. Data suggested seasonal variability in stable carbon and nitrogen isotopes that could not be otherwise explained by changes in animal movement patterns. Similarly, animals did not change their foraging patterns despite fine-scale spatial and temporal variability of the upwelling event. Individual males tended to return to the same colony at which they were tagged and utilized the same at-sea regions for foraging irrespective of oceanographic conditions or time of year. Our study contrasts current general assumptions that male otariid life history strategies should result in greater dispersal, with adult male Australian sea lions displaying central place foraging behaviour similar to males of other otariid species in the region.

  1. Fine-scale pathways used by adult sea lampreys during riverine spawning migrations

    USGS Publications Warehouse

    Holbrook, Christopher; Bergstedt, Roger A.; Adams, Noah S.; Hatton, Tyson; McLaughlin, Robert L.

    2015-01-01

    Better knowledge of upstream migratory patterns of spawning Sea Lampreys Petromyzon marinus, an invasive species in the Great Lakes, is needed to improve trapping for population control and assessment. Although trapping of adult Sea Lampreys provides the basis for estimates of lake-wide abundance that are used to evaluate the Sea Lamprey control program, traps have only been operated at dams due to insufficient knowledge of Sea Lamprey behavior in unobstructed channels. Acoustic telemetry and radiotelemetry were used to obtain movement tracks for 23 Sea Lampreys in 2008 and 18 Sea Lampreys in 2009 at two locations in the Mississagi River, Ontario. Cabled hydrophone arrays provided two-dimensional geographic positions from acoustic transmitters at 3-s intervals; depth-encoded radio tag detections provided depths. Upstream movements occurred at dusk or during the night (2015–0318 hours). Sea Lampreys were closely associated with the river bottom and showed some preference to move near banks in shallow glide habitats, suggesting that bottom-oriented gears could selectively target adult Sea Lampreys in some habitats. However, Sea Lampreys were broadly distributed across the river channel, suggesting that the capture efficiency of nets and traps in open channels would depend heavily on the proportion of the channel width covered. Lack of vertical movements into the water column may have reflected lamprey preference for low water velocities, suggesting that energy conservation was more beneficial for lampreys than was vertical searching in rivers. Improved understanding of Sea Lamprey movement will assist in the development of improved capture strategies for their assessment and control in the Great Lakes.

  2. Farming the Sea

    ERIC Educational Resources Information Center

    Morgan, William

    1971-01-01

    Florida has initiated a training program in an entirely new dimension--Sea Farming. Presented is a description of the vocational agriculture program designed to teach propagation, cultivation, harvesting, marketing, and conservation practices related to production of oysters, shrimp, scallops, crabs, and fin fishes. (Editor/GB)

  3. Formation of scalloped cross-bedding without unsteady flows.

    USGS Publications Warehouse

    Rubin, D.M.

    1987-01-01

    Scalloped cross-bedding formed by fluctuating flow superficially resembles that formed by superimposed or intersecting bedforms, but, as illustrated in three-dimensional computer plots, the two kinds of structures commonly can be distinguished by directional properties of the bedding. Scallops deposited by alongslope-migrating, superimposed bedforms have cross-bed and bounding-surface dip patterns that lack bilateral symmetry and have cross-bed dips that are asymmetrically distributed relative to bounding-surface dips. Scallops with dip patterns that are bilaterally symmetrically distributed relative to the bounding-surface dips can be produced either by fluctuating flow or by downslope or upslope migration of superimposed bedforms. An example of nearshore-marine scalloped cross-bedding of Pleistocene age was examined in detail in a coastal terrace of Monterey Bay, California. -from Author

  4. Scallop DMT functions as a Ca2+ transporter.

    PubMed

    Toyohara, Haruhiko; Yamamoto, Sayuri; Hosoi, Masatomi; Takagi, Masaya; Hayashi, Isao; Nakao, Kenji; Kaneko, Shuji

    2005-05-09

    We identified a DMT (divalent metal transporter) homologous protein that functions as a Ca(2+) transporter. Scallop DMT cDNA encodes a 539-amino-acid protein with 12 putative membrane-spanning domains and has a consensus transport motif in the fourth extracellular loop. Since its mRNA is significantly expressed in the gill and intestine, it is assumed that scallop DMT transports Ca(2+) from seawater by the gill and from food by the intestine. Scallop DMT lacks the iron-responsive element commonly found in iron-regulatory proteins, suggesting that it is free of the post-transcriptional regulation from intracellular Fe(2+) concentration. Scallop DMT distinctly functions as a Ca(2+) transporter unlike other DMTs, however, it also transports Fe(2+) and Cd(2+) similar to them.

  5. De Novo Characterization of Japanese Scallop Mizuhopecten yessoensis Transcriptome and Analysis of Its Gene Expression following Cadmium Exposure

    PubMed Central

    Meng, Xiao-lin; Liu, Mei; Jiang, Ke-yong; Wang, Bao-jie; Tian, Xue; Sun, Shu-juan; Luo, Zuo-yong; Qiu, Chu-wen; Wang, Lei

    2013-01-01

    Background Japanese scallop has been cultured on a large-scale in China for many years. However, serious marine pollution in recent years has resulted in considerable loss to this industry. Moreover, due to the lack of genomic resources, limited research has been carried out on this species. To facilitate the understanding at molecular level immune and stress response mechanism, an extensive transcriptomic profiling and digital gene expression (DGE) database of Japanese scallop upon cadmium exposure was carried out using the Illumina sequencing platform. Results RNA-seq produced about 112 million sequencing reads from the tissues of adult Japanese scallops. These reads were assembled into 194,839 non-redundant sequences with open reading frame (ORF), of which 14,240 putative amino acid sequences were assigned biological function annotation and were annotated with gene ontology and eukaryotic orthologous group terms. In addition, we identified 720 genes involved in response to stimulus and 302 genes involved in immune-response pathways. Furthermore, we investigated the transcriptomic changes in the gill and digestive gland of Japanese scallops following cadmium exposure using a tag-based DGE system. A total of 7,556 and 3,002 differentially expressed genes were detected, respectively, and functionally annotated with KEGG pathway annotations. Conclusion This study provides a comprehensive transcripts sequence resource for the Japanese scallop and presents a survey of gene expression in response to heavy metal exposure in a non-model marine invertebrate via the Illumina sequencing platform. These results may contribute to the in-depth elucidation of the molecular mechanisms involved in bivalve responses to marine pollutants. PMID:23741332

  6. Two novel elements (CFG1 and PYG1) of Mag lineage of Ty3/Gypsy retrotransposons from Zhikong scallop (Chlamys farreri) and Japanese scallop (Patinopecten yessoensis).

    PubMed

    Wang, Shi; Bao, Zhenmin; Hu, Xiaoli; Shao, Mingyu; Zhang, Lingling; Hu, Jingjie

    2008-05-01

    Two novel elements (CFG1 and PYG1) of Mag lineage of Ty3/Gypsy retrotransposons were cloned from Zhikong scallop (Chlamys farreri) and Japanese scallop (Patinopecten yessoensis). The total length of the CFG1 element is 4826 bp, including 5'-LTR (192 bp), the entire ORF (4047 bp) and 3'-LTR (189 bp). The entire ORFs of both CFG1 and PYG1 elements are composed of 1348 aa and do not have any frameshifts. Their closest relative is Jule element from the poeciliid fish (Xiphophorus maculatus). On average, the diploid genome of C. farreri contains approximately 84 copies of CFG1 elements. We summarize the major features of CFG1, PYG1 and other elements of Mag lineage of the Ty3/Gypsy group. mRNA expression of CFG1 element in larvae increases gradually before the gastrulae stage and decreases gradually afterward, whereas in adductor such expression in adductor muscle and digestive gland are lower than those in other tissues. Overall, mRNA expression of CFG1 element in the early larvae is significantly higher than that in adult tissues. In muscle tissue, while the promoter and partial GAG domain of CFG1 element are unmethylated, the partial RT domain is highly methylated. These results suggest that CFG1 expression may be controlled by a post-transcriptional gene silencing mechanism that is associated with coding-region (RT domain) methylation.

  7. Visceral scalloping on abdominal computed tomography due to abdominal tuberculosis

    PubMed Central

    Sharma, Vishal; Bhatia, Anmol; Malik, Sarthak; Singh, Navjeet; Rana, Surinder S.

    2017-01-01

    Objective: Scalloping of visceral organs is described in pseudomyxoma peritonei, malignant ascites, among other conditions, but not tuberculosis. Methods: We report findings from a retrospective study of patients with abdominal tuberculosis who had visceral scalloping on abdominal computed tomography (CT). Diagnosis of abdominal tuberculosis was made on the basis of combination of clinical, biochemical, radiological and microbiological criteria. The clinical data, hematological and biochemical parameters, and findings of chest X-ray, CT, Mantoux test, and HIV serology were recorded. Results: Of 72 patients with abdominal tuberculosis whose CT scans were included, seven patients had visceral scalloping. The mean age of these patients was 32.14 ± 8.43 years and four were men. While six patients had scalloping of liver, one had splenic scalloping. The patients presented with abdominal pain (all), abdominal distension (five patients), loss of weight or appetite (all), and fever (four patients). Mantoux test was positive in five, while none had HIV infection. The diagnosis was based on fluid (ascitic or collections) evaluation in four patients, ileo-cecal biopsy in one patient, fine needle aspiration from omental thickening in one patient, and sputum positivity for acid fast bacilli (AFB) in one patient. On CT examination, four patients had ascites, five had collections, one had lymphadenopathy, four had peritoneal involvement, three had pleural effusion, and two had ileo-cecal thickening. All except one patient received standard ATT for 6 months or 9 months (one patient). Pigtail drainage for collections was needed for two patients. Discussion: This report is the first description of visceral scalloping of liver and spleen in patients with abdominal tuberculosis. Previously, this finding has been reported primarily with pseudomyxoma peritonei and peritoneal carcinomatosis. Conclusion: Visceral scalloping may not conclusively distinguish peritoneal

  8. Ultrasound imaging of the inguinal region of adult male loggerhead sea turtles (Caretta caretta).

    PubMed

    Pease, Anthony; Blanvillain, Gaëlle; Rostal, David; Owens, David; Segars, Al

    2010-03-01

    The biology and reproductive anatomy of male loggerhead sea turtles (Caretta caretta) have been difficult to study. The principle method for evaluation of the coelomic cavity in both adult and juvenile male sea turtles is celioscopy. The purpose of this study was to describe the technique and structures seen when scanning the inguinal region of live, wild-caught, adult male loggerhead sea turtles and to compare these findings to those resulting from celioscopy and necropsy. Twenty-one adult male loggerhead sea turtles were collected by trawling in the Cape Canaveral shipping channel in April 2007. All turtles were placed in dorsal recumbency and imaged with a Sonosite 180 Vet Plus (Sonosite, Inc., Bothell, Washington 98021, USA) and a microconvex, 4-7-MHz curvilinear array probe. The inguinal region was divided into four quadrants: cranial, lateral, medial, and caudal. Celioscopy was performed on 13 turtles, and biopsies were obtained of the testes and the epididymides to confirm correct identification of the structures. In the cranial aspect of the inguinal region, the urinary bladder and large and small intestines were identified. In the lateral inguinal region, the lung and kidney were seen. In the medial aspect of the inguinal region, the testis and epididymis were routinely identified. In the caudal aspect of the inguinal region, the coxofemoral joint was seen. A small learning curve was required; however, correlation with celioscopy and biopsy showed that consistent, repeatable identification of caudal coelomic structures was easily achieved. Ultrasound provided an inexpensive, rapid, noninvasive method to evaluate the reproductive anatomy of live-captured, male loggerhead sea turtles.

  9. The immune system and its modulation mechanism in scallop.

    PubMed

    Song, Linsheng; Wang, Lingling; Zhang, Huan; Wang, Mengqiang

    2015-09-01

    Scallops are a cosmopolitan family of bivalves, and some of them are highly prized as dominant aquaculture species. In the past decades, there have been increasing studies on the basic biology and immunology of scallops, and this review summarizes the research progresses of immune system and its modulation mechanism in scallop. As invertebrate, scallops lack adaptive immunity and they have evolved an array of sophisticated strategies to recognize and eliminate various invaders by employing a set of molecules and cells. It is evident that basic immune reactions such as immune recognition, signal transduction, and effector synthesis involved in immune response are accomplished in a variety of ways. They rely upon an extensive repertoire of phagocytosis, apoptosis and encapsulation of the circulating hemocytes for eliminating invasive pathogens, as well as the production of immune effectors that are active against a large range of pathogens or sensitive for the environmental stress. Furthermore, the molecular constitutions, metabolic pathways and immunomodulation mechanisms of the primitive catecholaminergic, cholinergic, enkephalinergic system and NO system in scallop are also discussed, which can be taken as an entrance to better understand the origin and evolution of the neuroendocrine-immune regulatory network in lower invertebrates.

  10. Blocking and guiding adult sea lamprey with pulsed direct current from vertical electrodes

    USGS Publications Warehouse

    Johnson, Nicholas S.; Thompson, Henry T.; Holbrook, Christopher M.; Tix, John A.

    2014-01-01

    Controlling the invasion front of aquatic nuisance species is of high importance to resource managers. We tested the hypothesis that adult sea lamprey (Petromyzon marinus), a destructive invasive species in the Laurentian Great Lakes, would exhibit behavioral avoidance to dual-frequency pulsed direct current generated by vertical electrodes and that the electric field would not injure or kill sea lamprey or non-target fish. Laboratory and in-stream experiments demonstrated that the electric field blocked sea lamprey migration and directed sea lamprey into traps. Rainbow trout (Oncorhynchus mykiss) and white sucker (Catostomus commersoni), species that migrate sympatrically with sea lamprey, avoided the electric field and had minimal injuries when subjected to it. Vertical electrodes are advantageous for fish guidance because (1) the electric field produced varies minimally with depth, (2) the electric field is not grounded, reducing power consumption to where portable and remote deployments powered by solar, wind, hydro, or a small generator are feasible, and (3) vertical electrodes can be quickly deployed without significant stream modification allowing rapid responses to new invasions. Similar dual-frequency pulsed direct current fields produced from vertical electrodes may be advantageous for blocking or trapping other invasive fish or for guiding valued fish around dams.

  11. Reproduction, preweaning survival, and survival of adult sea otters at Kodiak Island, Alaska

    USGS Publications Warehouse

    Monson, Daniel H.; DeGange, Anthony R.

    1995-01-01

    Radiotelemetry methods were used to examine the demographic characteristics of sea otters inhabiting the leading edge of an expanding population on Kodiak Island, Alaska. Fifteen male and 30 female sea otters were instrumented and followed from 1986 to 1990. Twenty-one percent of females were sexually mature (had pupped) at age 2, 57% by age 3, 88% by age 4, and 100% by age 5. Fifteen females produced 26 pups, an overall reproduction rate of 94% for mature females. The reproduction rate was 17, 45, 66, and 100% for 2-, 3-, 4-, and 5-year-olds, respectively. Eighty-five percent of observed pups survived to weaning (120 days), and the percentage of pups weaned ranged from 34% for pups of 2-year-olds to 100% for pups of 5-year-olds. At least three of four known pup losses occurred within a month of parturition. The mean pup dependency period for weaned pups was 153 days and the mean gestation period was 218 days. No synchrony in pupping activity was observed. Mean annual survival of adults was high. Estimates of survival ranged from 89 to 96% for females and 86 to 91% for males. Human harvest was the primary source of known mortality of adults. Our estimates of reproductive rates and survival of adults are at the high end of those reported for sea otters, but preweaning survival stands out as being particularly high. Abundant food resources and the availability of protected water presumably contributed to the high reproductive success observed in this recently established sea otter population.

  12. Adult sea lamprey tolerates biliary atresia by altering bile salt composition and renal excretion

    PubMed Central

    Cai, Shi-Ying; Lionarons, Daniël A.; Hagey, Lee; Soroka, Carol J.; Mennone, Albert; Boyer, James L.

    2012-01-01

    The sea lamprey (Petromyzon marinus) is a genetically programmed animal model for biliary atresia as it loses its bile ducts and gallbladder during metamorphosis. However, in contrast to patients with biliary atresia or other forms of cholestasis who develop progressive disease, the post-metamorphosis lampreys grow normally to adult size. To understand how the adult lamprey thrives without the ability to secrete bile, we examined bile salt homeostasis in larval and adult lampreys. Adult livers were severely cholestatic with levels of bile salts >1 mM, but no evidence of necrosis, fibrosis, or inflammation. Interestingly, both larvae and adults had normal plasma levels (~10 μM) of bile salts. In larvae, petromyzonol sulfate (PZS) was the predominant bile salt, whereas the major bile salts in adult liver were sulfated C27 bile alcohols. Cytotoxicity assays revealed that PZS was highly toxic. Pharmacokinetic studies in free-swimming adults revealed that ~35% of intravenously injected bromosulfophthalein (BSP) was eliminated over a 72 hr period. Collection of urine and feces demonstrated that both endogenous and exogenous organic anions, including biliverdin, bile salts and BSP, were predominantly excreted via the kidney with minor amounts also detected in feces. Gene expression analysis detected marked up-regulation of orthologs of known organic anion and bile salt transporters in the kidney with lesser effects in the intestine and gills in adults compared to larvae. These findings indicate that adult lampreys tolerate cholestasis by altering hepatic bile salt composition, while maintaining normal plasma bile salt levels predominantly through renal excretion of bile products. Therefore, we conclude that strategies to accelerate renal excretion of bile salt and other toxins should be beneficial for patients with cholestasis. PMID:23175353

  13. Conservation Genetics of the Scalloped Hammerhead Shark in the Pacific Coast of Colombia.

    PubMed

    Quintanilla, Sonia; Gómez, Alberto; Mariño-Ramírez, Camila; Sorzano, Carolina; Bessudo, Sandra; Soler, German; Bernal, Jaime E; Caballero, Susana

    2015-01-01

    Previous investigations of the population genetics of the scalloped hammerhead sharks (Sphyrna lewini) in the Eastern Tropical Pacific have lacked information about nursery areas. Such areas are key to promoting conservation initiatives that can protect young sharks from threats such as overfishing. Here, we investigated the genetic diversity, phylogeography, and connectivity of S. lewini found in 3 areas of Colombia's Pacific coast: around Malpelo Island and in 2 National Natural Parks on the Colombian Pacific mainland (Sanquianga and Ensenada de Utría). We analyzed mtDNA control region (CR) sequences and genotyped 15 microsatellite loci in 137 samples of adults and juveniles. The mtDNA analyses showed haplotypes shared between the Colombian Pacific individuals sampled in this investigation and other areas in the Eastern Tropical Pacific, the Indo-Pacific, and with sequences previously reported in Colombia (Buenaventura Port), as well as 4 unique haplotypes. Population assignment and paternity analyses detected 3 parent-offspring pairs between Malpelo and Sanquianga and 1 between Malpelo and Utría. These results indicate high genetic connectivity between Malpelo Island and the Colombian Pacific coast, suggesting that these 2 areas are nurseries for S. lewini. This is, to our knowledge, the first evidence of nursery areas identified for the scalloped hammerhead shark anywhere in the world. Additional conservation planning may be required to protect these nursery habitats of this endangered shark species.

  14. Molecular cloning and transcriptional regulation of an allograft inflammatory factor-1 (AIF-1) in Zhikong scallop Chlamys farreri.

    PubMed

    Wang, Jingjing; Zhang, Huan; Wang, Lingling; Qiu, Limei; Yue, Feng; Yang, Chuanyan; Song, Linsheng

    2013-11-10

    The allograft inflammatory factor-1 (AIF-1) is one of the key factors associated with inflammatory response. In the present study, the full-length cDNA of AIF-1 was identified from Zhikong scallop Chlamys farreri (named as CfAIF-1) by EST (expressed sequence tag) analysis and RACE (rapid-amplification of cDNA ends) approaches. The cDNA of CfAIF-1 consisted of a 5-terminal untranslated region (UTR) of 58 bp, a 3-UTR of 607 bp with a poly (A) tail, and an open reading frame (ORF) of 468 bp encoding a polypeptide of 155 amino acids with the putative molecular mass of 17.8 kDa. There was an EF hand Ca(2+)-binding motif in the deduced amino acid sequence of CfAIF-1 which was conserved in other AIF-1s. CfAIF-1 shared closer phylogenetic relationship with invertebrate counterparts than vertebrate. The mRNA transcripts of CfAIF-1 were dominantly expressed in hepatopancreas, hemocytes and adductor. During scallop ontogenesis, the CfAIF-1 mRNA was expressed at a low level at early developmental stages from eggs to blastula, and then increased significantly from gastruta to late veliger larvae (P<0.05). Moreover, the mRNA expression levels of CfAIF-1 in the hemocytes of adult scallop were significantly up-regulated during 12-48 h after LPS, PGN and poly I:C stimulation (P<0.01), but there was no significant fluctuation detected after glucan stimulation. Furthermore, the challenge of bacteria Vibrio anguillarum remarkably induced the mRNA expression of CfAIF-1 in hemocytes at 6h (P<0.05) and 12h (P<0.01). All these results collectively indicated that CfAIF-1 might be involved in the immune response during the ontogenesis and contribute to the defense against microbe infection in scallops.

  15. A HABITAT SUITABILITY INDEX FOR THE BAY SCALLOP ARGOPECTEN IRRADIANS

    EPA Science Inventory

    Poster presentation at a scientific meeting. A survey of Lagoon Pond, Martha's Vineyard, MA, USA was conducted in September 2005 to determine the combination of habitat factors most highly correlated with the bay scallop Argopecten irradians) abundance. A stratified random samp...

  16. 50 CFR 648.11 - At-sea sea sampler/observer coverage.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... raft, during daylight hours as weather and sea conditions allow, and with the agreement of the sea... number that does not match the scallop trip plan that was called in to NMFS. Confirmation numbers for trip notification calls are only valid for 48 hr from the intended sail date; and (4) Procurement...

  17. 50 CFR 648.11 - At-sea sea sampler/observer coverage.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... raft, during daylight hours as weather and sea conditions allow, and with the agreement of the sea... number that does not match the scallop trip plan that was called in to NMFS. Confirmation numbers for trip notification calls are only valid for 48 hr from the intended sail date; and (4) Procurement...

  18. Chemical Characterization of Lipophilic Constituents in the Skin of Migratory Adult Sea Lamprey from the Great Lakes Region

    PubMed Central

    Dissanayake, Amila A.; Wagner, C. Michael; Nair, Muraleedharan G.

    2016-01-01

    The sea lamprey (Petromzons marinus) is an invasive ectoparasite of large-bodied fishes that adversely affects the fishing industry and ecology of the Laurentian Great Lakes. Lipid content in the whole sea lamprey and muscles, liver and kidney of metamorphosing larval stages has been reported. Similarly, the fatty acid profile of the rope tissues of sexually-mature male sea lampreys has also been reported. The average body weight of a sub-adult migratory sea lamprey is 250 g, which includes 14.4% skin (36 g). Our preliminary extraction data of an adult sea lamprey skin revealed that it contained approximately 8.5% of lipophilic compounds. Lamprey skin is home to a naturally aversive compound (an alarm cue) that is being developed into a repellent for use in pest management. As part of an ongoing investigation to identify the chemical structure of the sea lamprey alarm cue, we extracted the skin with water and methanol, respectively. The methanolic extract (1.55%) contained exclusively lipophilic compounds and did not include the alarm cue. We chemically characterized all compounds present in the methanolic extract as cholesterol esters (CE), tri- and di-glycerides (TG and DG), cholesterol, free fatty acids (FFA) and minor amounts of plasticizers. The free fatty acids fraction was composed of saturated (41.8%), monounsaturated (40.7%) and polyunsaturated (17.4%) fatty acids, respectively. The plasticizers characterized were phthalate and benzoate and found to be 0.95 mg and 2.54 mg, respectively, per adult sea lamprey skin. This is the first report of the chemical characterization of all the lipophilic constituents in the skin of sub-adult migratory sea lamprey. The CEs isolated and characterized from sea lamprey skin are also for the first time. PMID:27992570

  19. scalloped functions in a regulatory loop with vestigial and wingless to pattern the Drosophila wing.

    PubMed

    Varadarajan, S; VijayRaghavan, K

    1999-01-01

    The development of the Drosophila wing involves progressive patterning events. In the second larval instar, cells of the wing disc are allotted wing or notum fates by a wingless-mediated process and dorsal or ventral fates by the action of apterous and wingless. Notch-mediated signalling is required for the expression of the genes vestigial and scalloped in the presumptive wing blade. Later, wingless, Notch and cut are involved in cell fate specification along the wing margin. The function of scalloped in this process is not well understood and is the focus of this study. We show that patterning downstream of Notch and wingless pathways is altered in scalloped mutants. Reduction in scalloped expression results in a loss of expression of wing blade- and margin-specific markers. Misexpression of scalloped in the presumptive wing causes misexpression of scalloped, vestigial and wingless reporter genes. However, high levels of scalloped expression have a negative influence on wingless, vestigial and its own expression. Our results demonstrate that scalloped functions in a level-dependent manner in the presumptive wing blade in a loop that involves vestigial and itself. We suggest that wing development requires the regulated expression of scalloped together with vestigial-the "wing formation" effects of Vestigial in other imaginal discs are probably due to its interaction with the scalloped gene product normally expressed in these discs.

  20. Same size--same niche? Foraging niche separation between sympatric juvenile Galapagos sea lions and adult Galapagos fur seals.

    PubMed

    Jeglinski, Jana W E; Goetz, Kimberley T; Werner, Christiane; Costa, Daniel P; Trillmich, Fritz

    2013-05-01

    1. In vertebrates, patterns of resource utilization change throughout development according to age- and or size-specific abilities and requirements. Thus, interspecific competition affects different age classes differently. 2. Adults of sympatric species often show distinct foraging niche segregation, but juvenile resource use might overlap with adult competitors of similar body size. Resultant negative effects on juveniles can have important consequences for population dynamics, yet such interactions have received little attention in studies of mammalian communities. 3. Using GPS tracking devices, time-depth recorders and stable isotope data, we compared diving depth, activity time, trophic position and foraging habitat characteristics to investigate foraging niche overlap between similar-sized sympatric juvenile Galapagos sea lions (Zalophus wollebaeki) and adult Galapagos fur seals (Arctocephalus galapagoensis) and compared each group with much larger-bodied adult Galapagos sea lions. 4. We found little indication for direct competition but a complex pattern of foraging niche segregation: juvenile sea lions and adult fur seals dived to shallow depths at night, but foraged in different habitats with limited spatial overlap. Conversely, juvenile and adult sea lions employed different foraging patterns, but their foraging areas overlapped almost completely. 5. Consistency of foraging habitat characteristics between juvenile and adult sea lions suggests that avoidance of competition may be important in shaping foraging habitat utilization. Resultant specialization on a limited habitat could contribute to low sea lion numbers that contrast with high fur seal abundance. Our data suggest that exploitation by multiple predators within spatially restricted foraging ranges of juveniles might negatively impact juvenile foraging success and ultimately influence population dynamics.

  1. Impact of particulate pollutant metals on larval and adult bivalve molluscs

    SciTech Connect

    Gilbert, T.R.; Robinson, W.E. ); Morse, M.P. . Marine Science Lab.)

    1982-10-25

    Our investigations of the effects of pollutants on bivalve molluscs have continued with studies with in the following areas: bioaccumulation of trace metals in adult sea scallops exposed to dissolved and particulate forms of the metals, SEM/EDXA studies of phosphoritic concretions in the kidneys of adult sea scallops (Placopecten magellanicus), documentation of the normal embryonic and larval development, including shell formation, in surf clams (Spisula solidissima), evaluation of the toxicity of dissolved silver to the gametes and larvae of surf clams at several stages of development, and examination of the effects of turbid suspensions on the feeding efficiency of larval Mercenaria mercenaria. The overall goal of our work is twofold. First, we are striving to gain an understanding of the pathways by which metals are transported within bivalve molluscs. The production of metallothioneins and metal-rich inorganic concretions have been documented for a number of bivalves. The ways in which of metal-rich matrices in membrane-limited vesicles as an intermediate step, is one area of investigation. Second, we are examining the relative sensitivities of the gamete and of early life stages of these organisms to stresses induced by exposure to energy-related pollutants. 46 refs., 12 figs., 8 tabs.

  2. Antagonizing scalloped with a novel vestigial construct reveals an important role for scalloped in Drosophila melanogaster leg, eye and optic lobe development.

    PubMed

    Garg, Ankush; Srivastava, Ajay; Davis, Monica M; O'Keefe, Sandra L; Chow, Leola; Bell, John B

    2007-02-01

    Scalloped (SD), a TEA/ATTS-domain-containing protein, is required for the proper development of Drosophila melanogaster. Despite being expressed in a variety of tissues, most of the work on SD has been restricted to understanding its role and function in patterning the adult wing. To gain a better understanding of its role in development, we generated sd(47M) flip-in mitotic clones. The mitotic clones had developmental defects in the leg and eye. Further, by removing the VG domains involved in activation, we created a reagent (VGDeltaACT) that disrupts the ability of SD to form a functional transcription factor complex and produced similar phenotypes to the flip-in mitotic clones. The VGDeltaACT construct also disrupted adult CNS development. Expression of the VGDeltaACT construct in the wing alters the cellular localization of VG and produces a mutant phenotype, indicating that the construct is able to antagonize the normal function of the SD/VG complex. Expression of the protein:protein interaction portion of SD is also able to elicit similar phenotypes, suggesting that SD interacts with other cofactors in the leg, eye, and adult CNS. Furthermore, antagonizing SD in larval tissues results in cell death, indicating that SD may also have a role in cell survival.

  3. Olfactory-mediated stream-finding behavior of migratory adult sea lamprey (Petromyzon marinus)

    USGS Publications Warehouse

    Vrieze, L.A.; Bergstedt, R.A.; Sorensen, P.W.

    2011-01-01

    Stream-finding behavior of adult sea lamprey (Petromyzon marinus), an anadromous fish that relies on pheromones to locate spawning streams, was documented in the vicinity of an important spawning river in the Great Lakes. Untreated and anosmic migrating sea lampreys were implanted with acoustic transmitters and then released outside the Ocqueoc River. Lampreys swam only at night and then actively. When outside of the river plume, lampreys pursued relatively straight bearings parallel to the shoreline while making frequent vertical excursions. In contrast, when within the plume, lampreys made large turns and exhibited a weak bias towards the river mouth, which one-third of them entered. The behavior of anosmic lampreys resembled that of untreated lampreys outside of the plume, except they pursued a more northerly compass bearing. To locate streams, sea lampreys appear to employ a three-phase odor-mediated strategy that involves an initial search along shorelines while casting vertically, followed by river-water-induced turning that brings them close to the river's mouth, which they then enter using rheotaxis. This novel strategy differs from that of salmonids and appears to offer this poor swimmer adaptive flexibility and suggests ways that pheromonal odors might be used to manage this invasive species.

  4. Estimating total population size for adult female sea turtles: Accounting for non-nesters

    USGS Publications Warehouse

    Kendall, W.L.; Richardson, J.I.; Rees, Alan F.

    2008-01-01

    Assessment of population size and changes therein is important to sea turtle management and population or life history research. Investigators might be interested in testing hypotheses about the effect of current population size or density (number of animals per unit resource) on future population processes. Decision makers might want to determine a level of allowable take of individual turtles of specified life stage. Nevertheless, monitoring most stages of sea turtle life histories is difficult, because obtaining access to individuals is difficult. Although in-water assessments are becoming more common, nesting females and their hatchlings remain the most accessible life stages. In some cases adult females of a given nesting population are sufficiently philopatric that the population itself can be well defined. If a well designed tagging study is conducted on this population, survival, breeding probability, and the size of the nesting population in a given year can be estimated. However, with published statistical methodology the size of the entire breeding population (including those females skipping nesting in that year) cannot be estimated without assuming that each adult female in this population has the same probability of nesting in a given year (even those that had just nested in the previous year). We present a method for estimating the total size of a breeding population (including nesters those skipping nesting) from a tagging study limited to the nesting population, allowing for the probability of nesting in a given year to depend on an individual's nesting status in the previous year (i.e., a Markov process). From this we further develop estimators for rate of growth from year to year in both nesting population and total breeding population, and the proportion of the breeding population that is breeding in a given year. We also discuss assumptions and apply these methods to a breeding population of hawksbill sea turtles (Eretmochelys imbricata) from

  5. Maternal offloading of organochlorine contaminants in the yolk-sac placental scalloped hammerhead shark (Sphyrna lewini).

    PubMed

    Lyons, Kady; Adams, Douglas H

    2015-04-01

    Elasmobranchs are a group of animals that typically occupy upper trophic levels in food webs and have a propensity to accumulate high contaminant concentrations. To date, few studies have investigated maternal offloading processes in sharks, despite the fact that this process represents a substantial source of exposure for young sharks and is a significant pathway for contaminant redistribution within marine ecosystems. Comparable to mammalian systems, scalloped hammerhead sharks (Sphyrna lewini) utilize a yolk-sac placental strategy to nourish young in utero, which may allow females to transfer contaminants to young. Organic contaminants (PCBs and chlorinated pesticides) were measured in livers of both females and males from several age classes that were collected from U.S. Atlantic waters, including two near-term pregnant females and their embryos. Adult female hammerheads (n = 3) were found to have lower levels of PCBs compared to the younger, adult male (mean ± SD, 11.1 ± 1.0 vs. 22.8 μg g(-1) lw), but had substantially higher concentrations of pesticides (4.1 ± 0.9 vs. 1.9 μg g(-1) lw). Embryos from the two litters (n = 36) had similar levels of summed organic contaminant concentrations (4.6 ± 0.9 μg g(-1) lw) and pregnant females were estimated to offload approximately 0.03-2.3% of their hepatic contaminant load to offspring. While the potential health impacts of these transferred contaminants is unknown, this is the first study to demonstrate that scalloped hammerheads are exposed to a substantial amount of contaminants prior to birth and document maternal offloading of organochlorines in a pseudo-placental shark species. Therefore, future research should continue to investigate the potential adverse effects these contaminants have on elasmobranch physiology.

  6. Subcritical hydrothermal treatment for the recovery of liquid fertilizer from scallop entrails.

    PubMed

    Hwang, In-Hee; Aoyama, Hiroya; Abe, Natsuki; Matsuo, Takayuki; Matsuto, Toshihiko

    2015-01-01

    Scallop entrails are organic wastes containing abundant proteins and minerals but are considered difficult to recycle because of high cadmium concentrations. In this work, the current problem of scallop entrails recycling was investigated and a subcritical hydrothermal treatment (SCHT) was examined for the recovery of liquid fertilizer from scallop entrails. Scallop entrails are mainly recycled for composting and feedstuff production. However, the dilution by mixing scallop entrails with other feed waste was the sole countermeasure to reduce the cadmium concentration of compost. For feedstuff production, whole product derived from scallop entrails was exported to other countries instead of domestic utilization. Temperature, retention time (RT) at given temperature, and liquid-to-solid (LS) ratio were examined as SCHT conditions for scallop entrails processing. The extraction ratio of each constituent mainly depends on the temperature rather than the RT or the LS ratio. Upon the SCHT of scallop entrails at 200°C, an RT of 20 min, and an LS ratio of 10, the extraction of fertilizer constituents such as nitrogen, phosphorus, and potassium from the liquid product was optimum, whereas the release of cadmium was suppressed. The concentrations of heavy metals in the liquid product obtained using the above-mentioned SCHT conditions were below the maximum permissible concentration stipulated by the Fertilizer Control Law. SCHT is considered to be a feasible recycling method for scallop entrails to recover fertilizer components with a concomitant separation of cadmium from the product.

  7. Scalloping Characteristics in a Patient with Extra-Cranial Hemangioma

    PubMed Central

    Agrawal, Amit; Jena, Ranjan K.; Reddy, Umamaheswara

    2017-01-01

    Summary Infantile hemangiomas are the most common benign tumors of infancy and childhood with a reported incidence of 4% to 10% in infants. We report of a 9 year-old male child with a history of progressively increasing swelling over the right eyebrow region. The lesion was present since childhood; however, it increased in in size over the previous 3–4 months. The CT scan showed scalloping over the right supra-orbital ridge with an intact bone. The child underwent total excision of the lesion. A characteristic scalloping seen on imaging (depression in the outer or inner table of the skull) can help differentiate lesions of extracranial and intracranial origins. PMID:28144385

  8. Sleep apnea and oxygen saturation in adults at 2640 m above sea level☆

    PubMed Central

    Bazurto Zapata, Maria Angelica; Dueñas Meza, Elida; Jaramillo, Claudia; Maldonado Gomez, Dario; Torres Duque, Carlos

    2014-01-01

    Purpose To describe the SpO2 in wakefulness, sleep and during the apnea–hypopnea in adults living in Bogotá, located at 2640 m above sea level. Methods Descriptive observational study in adults referred for polysomnogram (PSG). A normal Apnea hypopnea index (AHI) was defined as ≤5 and obstructive sleep apnea (OSA) was classified as mild (AHI 5–15), moderate (AHI 15–30), and severe (AHI >30). T-test or ANOVA test for SpO2 differences between groups was used. Results 1799 patients, 33% women. 222 (12.8%) did not have OSA (normal IAH), 268 (14.9%) mild OSA, 315 (17.5%) moderate ,and 993 (55.2%) severe. In all cases a low SpO2 (SpO2<90%) was found. The SpO2 was lower when the AHI was higher, in wakefulness, in non-REM and in REM (p<0.001). For all grades of severity, SpO2 decreased significantly from wakefulness to non-REM sleep and to REM sleep (p<0.001). Patients with severe OSA had higher desaturation during wakefulness (85.2±6.6%), non-REM sleep (83.1±7.7%), REM sleep (78.8±10.2), and during events (75.1±9.1%). Conclusions Patients with OSA at 2640 m have nocturnal desaturation lower than 88%, which decreases with higher severity of OSA. The clinical impact of sleep disorders at this point may be greater than at sea level and should be studied. PMID:26483911

  9. Measuring energy expenditure in sub-adult and hatchling sea turtles via accelerometry.

    PubMed

    Halsey, Lewis G; Jones, T Todd; Jones, David R; Liebsch, Nikolai; Booth, David T

    2011-01-01

    Measuring the metabolic of sea turtles is fundamental to understanding their ecology yet the presently available methods are limited. Accelerometry is a relatively new technique for estimating metabolic rate that has shown promise with a number of species but its utility with air-breathing divers is not yet established. The present study undertakes laboratory experiments to investigate whether rate of oxygen uptake (VO2) at the surface in active sub-adult green turtles Chelonia mydas and hatchling loggerhead turtles Caretta caretta correlates with overall dynamic body acceleration (ODBA), a derivative of acceleration used as a proxy for metabolic rate. Six green turtles (25-44 kg) and two loggerhead turtles (20 g) were instrumented with tri-axial acceleration logging devices and placed singly into a respirometry chamber. The green turtles were able to submerge freely within a 1.5 m deep tank and the loggerhead turtles were tethered in water 16 cm deep so that they swam at the surface. A significant prediction equation for mean VO2 over an hour in a green turtle from measures of ODBA and mean flipper length (R(2) = 0.56) returned a mean estimate error across turtles of 8.0%. The range of temperatures used in the green turtle experiments (22-30 °C) had only a small effect on Vo₂. A VO2-ODBA equation for the loggerhead hatchling data was also significant (R(2) = 0.67). Together these data indicate the potential of the accelerometry technique for estimating energy expenditure in sea turtles, which may have important applications in sea turtle diving ecology, and also in conservation such as assessing turtle survival times when trapped underwater in fishing nets.

  10. Food utilization of adult flatfishes co-occurring in the Bohai Sea of China

    NASA Astrophysics Data System (ADS)

    Shuozeng, Dou

    Stomach contents were examined of 4527 adult individuals of 12 flatfish species collected during the 1982-1983 Bohai Sea Fisheries Resources Investigation. Their food habits, diet diversity, similarity of prey taxa, trophic niche breadth and diet overlap were systematically analysed. Ninety-seven prey species belonging to the Coelenterata, Nemertinea, Polychaeta, Mollusca, Crustacea, Echinodermata, Hemichordata and fish were found and five of them were considered to be principal prey for flatfishes: Alpheus japonicus, Oratosquilla oratoria, Alpheus distinguendus, Loligo japonicus and Crangon affinis. Among the flatfishes, Paralichthys olivaceus was piscivorous, whereas Pseudopleuronectes yokohamae and Pseudopleuronectes herzensteini both had polychaetes and molluscs as their main prey groups. Pleuronichthys cornutus was classified as a polychaete-mollusc eater, with a strong preference for crustaceans. Verasper variegatus, Cynoglossus semilaevis, Eopsetta grigorjewi and Cleisthenes herzensteini ate crustaceans. Kareius bicoloratus was classified as a mollusc-crustacean eater. Cynoglossus abbreviatus, Cynoglossus joyneri and Zebrias zebra were grouped as crustacean-fish eaters. However, Z. zebra also took polychaetes and C. abbreviatus and C. joyneri preyed on some molluscs. Trophic relationships among the flatfishes were complicated, but they occupied distinctive microhabitats in different seasons and selected their specific prey items, which was favourable to the stability of the flatfish community in the Bohai Sea.

  11. 76 FR 40674 - Fisheries of the Exclusive Economic Zone Off Alaska; Scallops

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-07-11

    ... prevent overfishing in the target fishery for weathervane scallops. Implementing these measures would... estimate of spawning biomass for weathervane scallops, the overfishing level (OFL) is specified as the MSY...-Stevens Act relative to preventing overfishing and establishing an ABC and ACL. The following is a...

  12. 50 CFR 648.64 - Yellowtail flounder sub-ACLs and AMs for the scallop fishery.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 10 2011-10-01 2011-10-01 false Yellowtail flounder sub-ACLs and AMs for the scallop fishery. 648.64 Section 648.64 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT...-ACLs and AMs for the scallop fishery. (a) As specified in § 648.55(d), and pursuant to the...

  13. Using a System Level Approach to Bay Scallop Enhancement and Management

    EPA Science Inventory

    Within the last twenty years total harvests of bay scallops (Argopecten irradians) have dwindled in the southern New England Region. Management of scallop populations has been underway on Martha’s Vineyard Island to provide the public with a fishery, and have included a com...

  14. Impact of a scallop drag on the sediment chemistry, microbiota, and faunal assemblages of a shallow subtidal marine benthic community

    NASA Astrophysics Data System (ADS)

    Watling, Les; Findlay, Robert H.; Mayer, Lawrence M.; Schick, Daniel F.

    2001-12-01

    Scallops are usually obtained by means of a heavy metal dredge that is pulled over the sea bottom. Most studies of the impact of this gear type have shown that larger invertebrates, in particular, are severely disturbed. These studies, however, have been conducted on coarse sediments, ranging from sands to cobble, and have dealt only with faunal changes. In this paper the impact of a New England type scallop dredge on the fauna and sedimentary nutritional characteristics of a silty sand community is detailed. The site, in the Damariscotta River, Maine, USA, was sampled during the fall and winter prior to, then again immediately following, the dragging event, and twice more over the ensuing six months. Loss of surficial sediment, lowered food quality of the sediment (as measured by microbial populations, enzyme hydrolysable amino acids, and chlorophyll a), and changes in the faunal composition of the dragged site were observed. While some taxa returned to the drag track relatively quickly, others such as the cumaceans, phoxocephalid and photid amphipods, and nephtyid polychaetes, were not seen in abundances comparable to those of the adjacent undragged site until the food quality also recovered.

  15. A model for autumn pelagic distribution of adult female polar bears in the Chukchi Seas, 1987-1994

    USGS Publications Warehouse

    Durner, G.M.; Douglas, D.C.; Nielson, R.M.; Amstrup, Steven C.

    2006-01-01

    We made predictions of polar bear (Ursus maritimus) autumn distribution in the Chukchi Sea with a Resource Selection Function (RSF) developed from 1198 satellite radio-collar locations on 124 adult female polar bears, 1987 – 1994. The RSF was created to assist in an aerial survey design for polar bears proposed by the U.S. Fish and Wildlife Service. The RSF was based on bathymetry and daily sea ice covariates extracted from passive microwave satellite imagery within the pelagic region > 25 km from shore. The RSF indicated that polar bears selected habitats with intermediate amounts (~50%) of ice cover in close proximity to higher ice concentrations, and over relatively shallow waters. The RSF showed good predictive abilities for the years of its construct, worked best in October, and was robust to inter-annual variability. When evaluated with recent (1997 – 2005) data, the RSF performed well for October and November but poorly in September. This loss of predictive abilities appeared to be related to recent changes in habitat due to longer melt seasons and younger sea ice, and testing the retrospective model with a small sample of recent polar bears locations from a limited region of the Chukchi Sea. Contemporary applications of this RSF must consider three factors that could limit its utility: 1) 2 different sea ice phenology; 2) distributions of males and sub-adults; and 3) occupancy in nearshore habitats.

  16. Specific localization of scallop gill epithelial calmodulin in cilia.

    PubMed

    Stommel, E W; Stephens, R E; Masure, H R; Head, J F

    1982-03-01

    Calmodulin has been isolated and characterized from the gill of the bay scallop aequipecten irradians. Quantitative electrophoretic analysis of epithelial cell fractions show most of the calmodulin to be localized in the cilia, specifically in the detergent- solubilized membrane-matrix fraction. Calmodulin represents 2.2 +/- 0.3 percent of the membrane-matrix protein or 0.41 +/- 0.5 percent of the total ciliary protein. Its concentration is at least 10(-4) M if distributed uniformly within the matrix. Extraction in the presence of calcium suggests that the calmodulin is not bound to the axoneme proper. The ciliary protein is identified as a calmodulin on the basis of its calcium- dependent binding to a fluphenazine-sepharose affinity column and its comigration with bovine brain calmodulin on alkaline-urea and SDS polyacrylamide gels in both the presence and absence of calcium. Scallop ciliary calmodulin activates bovine brain phosphodiesterase to the same extent as bovine brain and chicken gizzard calmodulins. Containing trimethyllysine and lacking cysteine and tryptophan, the amino acid composition of gill calmodulin is typical of known calmodulins, except that it is relatively high in serine and low in methionine. Its composition is less acidic than other calmodulins, in agreement with an observed isoelectric point approximately 0.2 units higher than that of bovine brain. Comparative tryptic peptide mapping of scallop gill ciliary and bovine brain calmodulins indicates coincidence of over 75 percent of the major peptides, but at least two major peptides in each show no near-equivalency. Preliminary results using ATP-reactivated gill cell models show no effect of calcium at micromolar levels on ciliary beat or directionality of the lateral cilia, the cilia which constitute the vast majority of those isolated. However, ciliary arrest will occur at calcium levels more than 150 muM. Because calmodulin usually functions in the micromolar range, its role in this system

  17. Mitochondrial genome of the Peruvian scallop Argopecten purpuratus (Bivalvia: Pectinidae).

    PubMed

    Marín, Alan; Alfaro, Rubén; Fujimoto, Takafumi; Arai, Katsutoshi

    2015-01-01

    The mitochondrial genome of the Peruvian scallop Argopecten purpuratus was determined. The length of the mitochondrial coding region is 15,608 bp. A typical bivalve mitochondrial composition was detected with 12 protein-coding genes, 2 ribosomal RNA genes and 21 transfer RNA genes, with the absence of the atp8 gene. Fifty percent of the protein-coding genes use typical ATG start codon, whereas five genes utilize ATA as their start codon. Only one gene was found to utilize TTG as its start codon. The A. purpuratus mitogenome shows a significant similarity to that of A. irradians irradians, in length as well as in gene composition.

  18. A coupled biophysical model for the distribution of the great scallop Pecten maximus in the English Channel

    NASA Astrophysics Data System (ADS)

    Le Goff, Clément; Lavaud, Romain; Cugier, Philippe; Jean, Fred; Flye-Sainte-Marie, Jonathan; Foucher, Eric; Desroy, Nicolas; Fifas, Spyros; Foveau, Aurélie

    2017-03-01

    In this paper we used a modelling approach integrating both physical and biological constraints to understand the biogeographical distribution of the great scallop Pecten maximus in the English Channel during its whole life cycle. A 3D bio-hydrodynamical model (ECO-MARS3D) providing environmental conditions was coupled to (i) a population dynamics model and (ii) an individual ecophysiological model (Dynamic Energy Budget model). We performed the coupling sequentially, which underlined the respective role of biological and physical factors in defining P. maximus distribution in the English Channel. Results show that larval dispersion by hydrodynamics explains most of the scallop distribution and enlighten the main known hotspots for the population, basically corresponding to the main fishing areas. The mechanistic description of individual bioenergetics shows that food availability and temperature control growth and reproduction and explain how populations may maintain themselves in particular locations. This last coupling leads to more realistic densities and distributions of adults in the English Channel. The results of this study improves our knowledge on the stock and distribution dynamics of P. maximus, and provides grounds for useful tools to support management strategies.

  19. Characterization, expression and function analysis of DAX1 gene of scallop ( Chlamys farreri jones and preston 1904) during its gametogenesis

    NASA Astrophysics Data System (ADS)

    Li, Hailong; Liu, Jianguo; Huang, Xiaoting; Wang, Dan; Zhang, Zhifeng

    2014-08-01

    DAX1, a member of nuclear receptor superfamily, has a function in the sex determination and gonadal differentiation of several vertebrate species. However, little information about DAX1 of invertebrates is available. Here we cloned a homolog of scallop ( Chlamys farreri Jones and Preston 1904) dax1, Cf-dax1, and determined its expression characteristics at mRNA and protein levels. The cDNA sequence of Cf-dax1 was 2093 bp in length, including 1404 bp open reading frame (ORF) encoding 467 amino acids. Unlike those of vertebrates, no conserved LXXLL-related motif was found in the putative DNA binding region of Cf-DAX1. Fluorescence in situ hybridization showed that Cf-dax1 located on the short arm of a pair of subtelocentric chromosomes. Tissue distribution analysis using semi-quantitative RT-PCR revealed that Cf-dax1 expressed widely in adult scallop tissues, with the highest expression level found in adductor muscle, moderate level in mantle, gill and testis, and low level in kidney, ovary and hepatopancreas. The result of quantitative real-time PCR indicated that the expression of Cf-dax1 was significantly higher ( P<0.05) in testis than in ovary at the same stage, showing a sex-dimorphic expression pattern. Furthermore, immunohistochemical detection found that Cf-DAX1 mainly located in spermatogonia and spermatocytes of testis and in oogonia and oocytes of ovary, implying that DAX1 may involve in gametogenesis of bivalves.

  20. In Vivo Administration of Scallop GnRH-Like Peptide Influences on Gonad Development in the Yesso Scallop, Patinopecten yessoensis

    PubMed Central

    Nagasawa, Kazue; Oouchi, Hitoshi; Itoh, Naoki; Takahashi, Keisuke G.; Osada, Makoto

    2015-01-01

    Existing research on the role of gonadotropin-releasing hormone (GnRH) in bivalve reproduction is inadequate, even though a few bivalve GnRH orthologs have been cloned. The objective of this paper was to elucidate the in vivo effect of GnRH administration in Yesso scallop reproduction. We performed in vivo administration of scallop GnRH (py-GnRH) synthetic peptide into the developing gonad, and analyzed its effect on gonad development for 6 weeks during the reproductive season. The resulting sex ratio in the GnRH administered (GnRH(+)) group might be male biased, whereas the control (GnRH(-)) group had an equal sex ratio throughout the experiment. The gonad index (GI) of males in the GnRH(+) group increased from week 2 to 24.8% at week 6. By contrast the GI of the GnRH(-) group peaked in week 4 at 16.6%. No significant difference was seen in female GI between the GnRH(+) and GnRH(-) groups at any sampling point. Oocyte diameter in the GnRH(+) group remained constant (about 42–45 μm) throughout the experiment, while in the GnRH(-) group it increased from 45 to 68 μm i.e. normal oocyte growth. The number of spermatogonia in the germinal acini of males in the GnRH(+) group increased from week 4 to 6. Hermaphrodites appeared in the GnRH(+) group in weeks 2 and 4. Their gonads contained many apoptotic cells including oocytes. In conclusion, this study suggests that py-GnRH administration could have a potential to accelerate spermatogenesis and cause an inhibitory effect on oocyte growth in scallops. PMID:26030928

  1. Feet, heat and scallops: what is the cost of anthropogenic disturbance in bivalve aquaculture?

    PubMed Central

    Halsey, Lewis G.; Chauvaud, Laurent

    2016-01-01

    The effects of unnatural disturbances on the behaviour and energetics of animals are an important issue for conservation and commercial animal production. Biologging enables estimation of the energy costs of these disturbances, but not specifically the effect these costs have on growth; a key outcome measure for animal farming enterprises. We looked at how natural and anthropogenically induced activity and energy expenditure of king scallops Pecten maximus varies with temperature. These data were then used to model growth time of king scallops reared in an aquaculture facility under different temperatures and anthropogenic disturbance levels. The scallops exhibited a typical total metabolic rate (MR)–temperature curve, with a peak reached at a middling temperature. The percentage of their total MR associated with spinning and swimming, behavioural responses to disturbance, was considerable. Interestingly, as temperature increased, the activity MR associated with a given level of activity decreased; a hitherto unreported relationship in any species. The model results suggest there is a trade-off in the ambient temperature that should be set by hatcheries between the optimal for scallop growth if completely undisturbed versus mitigating against the energy costs elicited by anthropogenic disturbance. Furthermore, the model indicates that this trade-off is affected by scallop size. Aquaculture facilities typically have controls to limit the impact of human activities, yet the present data indicate that hatcheries may be advised to consider whether more controls could further decrease extraneous scallop behaviours, resulting in enhanced scallop yields and improved financial margins. PMID:27069659

  2. Electroreception in juvenile scalloped hammerhead and sandbar sharks.

    PubMed

    Kajiura, Stephen M; Holland, Kim N

    2002-12-01

    The unique head morphology of sphyrnid sharks might have evolved to enhance electrosensory capabilities. The 'enhanced electroreception' hypothesis was tested by comparing the behavioral responses of similarly sized carcharhinid and sphyrnid sharks to prey-simulating electric stimuli. Juvenile scalloped hammerhead sharks Sphyrna lewini and sandbar sharks Carcharhinus plumbeus oriented to dipole electric fields from the same maximum distance (approximately 30 cm) and thus demonstrated comparable behavioral-response thresholds (<1 nV cm(-1)). Despite the similarity of response threshold, the orientation pathways and behaviors differed for the two species. Scalloped hammerheads typically demonstrated a pivot orientation in which the edge of the cephalofoil closest to the dipole remained stationary while the shark bent its trunk to orient to the center of the dipole. By contrast, sandbars swam in a broader arc towards the center of the dipole. The different orientation patterns are attributed to the hydrodynamic properties of the cephalofoil, which enables the hammerheads to execute sharp turns at high speed. The greater trunk width of the sandbar sharks prevented them from demonstrating the same degree of flexibility. Therefore, although the sphyrnid head morphology does not appear to confer a greater sensitivity to prey-simulating dipole electric fields, it does provide (1). a greater lateral search area, which may increase the probability of prey encounter, and (2). enhanced maneuverability, which may aid in prey capture.

  3. Inter-annual variability in spring abundance of adult Calanus finmarchicus from the overwintering population in the southeastern Norwegian Sea

    NASA Astrophysics Data System (ADS)

    Dupont, Nicolas; Bagøien, Espen; Melle, Webjørn

    2017-03-01

    Calanus finmarchicus is the dominant copepod species in the Norwegian Sea, where it plays a key role in the ecosystem by transferring energy from primary producers to higher trophic levels. This paper analyses a 17-year time series, 1996-2012, on C. finmarchicus collected within the Atlantic Water mass along the Svinøy transect in the southeastern Norwegian Sea. We use the spring abundance of adult as a proxy for the size of C. finmarchicus' overwintered population. The inter-annual trend in spring abundance of adult C. finmarchicus in the 200-0 m depth-stratum is assessed while accounting for spring population development to the adult stage represented by day of year for sampling, inter-annual changes in timing of population development, and spatial differences. For the most oceanic stations, a significant inter-annual trend in spring abundance of adult C. finmarchicus was revealed using generalized additive models (GAM). This trend primarily consists in an increase prior to year 2000 and a decrease between years 2000 and ca. 2011. For the stations closer to the coast, the identified inter-annual trend is a decrease during a longer period from the late 90s until ca. 2011. From 2000 to 2011, our estimates suggest a 50% decrease for the most oceanic stations, and as much as an 81% decrease for the stations closer to the coast. In addition the results suggest a consistent change in phenology over the years and the stations. The predicted spring peak of overwintered adult population abundance is suggested to become shorter by 3 days, and the predicted maximum of abundance to take place 4 days earlier over the 17 years of the time-series. The results highlight significant changes in intensity and timing of the overwintered population of a key zooplankton species in the Norwegian Sea that may have important implications on the scale of an entire ecosystem.

  4. Predictors of Successful Quitting among Thai Adult Smokers: Evidence from ITC-SEA (Thailand) Survey.

    PubMed

    Jampaklay, Aree; Borland, Ron; Yong, Hua-Hie; Sirirassamee, Buppha; Fotuhi, Omid; Fong, Geoffrey T

    2015-09-25

    This study uses longitudinal data from the International Tobacco Control Southeast Asia (ITC-SEA Thailand) survey to explore patterns and predictors of successful quitting among Thai adult smokers as a function of time quit. A cohort of a representative sample of 2000 smokers was surveyed four times from 2005 to 2009. A sample of 1533 individuals provided data for at least one of the reported analyses. Over the four years of follow-up, 97% made attempts to quit. Outcomes were successful quitting/relapse: (a) quit attempts of at least one month (short-term relapse, 43%) (57% remaining quit); (b) surviving at least six months (medium-term) (31%); (c) relapse between one and six months (45%); (d) having continuously quit between Waves 3 and 4 (sustained abstinence) (14%); and (e) relapse from six months on (44%) compared to those who continuously quit between Waves 3 and 4 (56%). Predictors for early relapse (<1 month) differ from longer-term relapse. Age was associated with reduced relapse over all three periods, and was much stronger for longer periods of abstinence. Cigarette consumption predicted relapse for short and medium terms. Self-assessed addiction was predictive of early relapse, but reversed to predict abstinence beyond six months. Previous quit history of more than one week was predictive of early abstinence, but became unrelated subsequently. Self-efficacy was strongly predictive of abstinence in the first month but was associated with relapse thereafter. Some determinants of relapse change with time quit, but this may be in somewhat different to patterns found in the West.

  5. Predictors of Successful Quitting among Thai Adult Smokers: Evidence from ITC-SEA (Thailand) Survey

    PubMed Central

    Jampaklay, Aree; Borland, Ron; Yong, Hua-Hie; Sirirassamee, Buppha; Fotuhi, Omid; Fong, Geoffrey T.

    2015-01-01

    This study uses longitudinal data from the International Tobacco Control Southeast Asia (ITC-SEA Thailand) survey to explore patterns and predictors of successful quitting among Thai adult smokers as a function of time quit. A cohort of a representative sample of 2000 smokers was surveyed four times from 2005 to 2009. A sample of 1533 individuals provided data for at least one of the reported analyses. Over the four years of follow-up, 97% made attempts to quit. Outcomes were successful quitting/relapse: (a) quit attempts of at least one month (short-term relapse, 43%) (57% remaining quit); (b) surviving at least six months (medium-term) (31%); (c) relapse between one and six months (45%); (d) having continuously quit between Waves 3 and 4 (sustained abstinence) (14%); and (e) relapse from six months on (44%) compared to those who continuously quit between Waves 3 and 4 (56%). Predictors for early relapse (<1 month) differ from longer-term relapse. Age was associated with reduced relapse over all three periods, and was much stronger for longer periods of abstinence. Cigarette consumption predicted relapse for short and medium terms. Self-assessed addiction was predictive of early relapse, but reversed to predict abstinence beyond six months. Previous quit history of more than one week was predictive of early abstinence, but became unrelated subsequently. Self-efficacy was strongly predictive of abstinence in the first month but was associated with relapse thereafter. Some determinants of relapse change with time quit, but this may be in somewhat different to patterns found in the West. PMID:26404335

  6. A rigorous proof of the scallop theorem and finite mass effects of a microswimmer

    NASA Astrophysics Data System (ADS)

    Ishimoto, Kenta; Yamada, Michio

    2011-11-01

    We reconsider fluid dynamics of a self-propulsive swimmer in Stokes flow. With an exact definition of deformation of a swimmer, a proof is given to the scallop theorem including the body rotation of the swimmer. Introducing a virtual swimmer, which has the same shape as the real swimmer but has no ambient fluid, we give an exact definition of the surface deformation of the generally translating and rotating swimmer, and then prove the scallop theorem rigorously for the massless swimmer. We also discuss the breakdown of the scallop theorem due to a finite mass (finite Stokes number) of the swimmer by using a perturbation expansion method and it is found that the breakdown generally occurs at the first order of Stokes number. In addition, employing the Purcell's ``scallop'' model, we show that the theorem holds up to a higher order of the Stokes number, if the swimmer's stroke has some symmetry.

  7. Antibacterial characteristics of heated scallop-shell nano-particles.

    PubMed

    Watanabe, Takashi; Fujimoto, Riku; Sawai, Jun; Kikuchi, Mikio; Yahata, Shinya; Satoh, Susumu

    2014-01-01

    Heated scallop-shell (HSS) nano-particles, prepared using a wet grinding mill, and microparticles were examined for their antibacterial activity against vegetative bacterial cells and spores. The median diameters of the nano-particles and micro-particles were approximately 20 nm and 30 µm, respectively. The antibacterial activity of HSS against Escherichia coli increased with an increase in concentration, regardless of particle size; however, the antibacterial activity of the nano-particles was much higher than that of micro-particles. The sporicidal activity of the nano-particles was also much higher than that of micro-particles, with HSS nano-particles able to kill Bacillus subtilis spores. A reduction of more than three orders of magnitude for B. subtilis spores was confirmed following a 30 min treatment at 5 mg/ml and 60℃, showing that the combination of HSS nano-particle treatment with mild heating was particularly effective for controlling bacterial spores.

  8. Habitat characteristics predicting distribution and abundance patterns of scallops in D'Entrecasteaux Channel, Tasmania.

    PubMed

    Mendo, Tania; Lyle, Jeremy M; Moltschaniwskyj, Natalie A; Tracey, Sean R; Semmens, Jayson M

    2014-01-01

    Habitat characteristics greatly influence the patterns of distribution and abundance in scallops, providing structure for the settlement of spat and influencing predation risk and rates of survival. Establishing scallop-habitat relationships is relevant to understanding the ecological processes that regulate scallop populations and to managing critical habitats. This information is particularly relevant for the D'Entrecasteaux Channel, south-eastern Tasmania (147.335 W, 43.220 S), a region that has supported significant but highly variable scallop production over many years, including protracted periods of stock collapse. Three species of scallops are present in the region; the commercial scallop Pecten fumatus, the queen scallop Equichlamys bifrons, and the doughboy scallop Mimachlamys asperrima. We used dive surveys and Generalized Additive Modelling to examine the relationship between the distribution and abundance patterns of each species and associated habitat characteristics. The aggregated distribution of each species could be predicted as a function of sediment type and species-specific habitat structural components. While P. fumatus was strongly associated with finer sediments and E. bifrons with coarse grain sediments, M. asperrima had a less selective association, possibly related to its ability to attach on a wide range of substrates. Other habitat characteristics explaining P. fumatus abundance were depth, Asterias amurensis abundance, shell and macroalgae cover. Equichlamys bifrons was strongly associated with macroalgae and seagrass cover, whereas M. asperrima abundance was greatly explained by sponge cover. The models define a set of relationships from which plausible hypotheses can be developed. We propose that these relationships are mediated by predation pressure as well as the specific behavioural characteristics of each species. The findings also highlight the specific habitat characteristics that are relevant for spatial management and habitat

  9. Is an Apicomplexan Parasite Responsible for the Collapse of the Iceland Scallop (Chlamys islandica) Stock?

    PubMed Central

    Kristmundsson, Árni; Erlingsdóttir, Ásthildur; Freeman, Mark A.

    2015-01-01

    Due to the total and unexpected collapse of the Iceland scallop, Chlamys islandica, stocks around Iceland during the 2000s, a commercial fishing ban has been imposed on this valuable resource since 2003. Following the initial identification of an apicomplexan parasite in the scallops, a long-term surveillance program was established to evaluate the effect of the parasite on the population. The infections were highly prevalent in all shell sizes throughout the study. However, the parasite only impacts mature scallops where they cause severe macroscopic changes, characterized by an extensively diminished and abnormally coloured adductor muscle. A highly significant relationship was observed between infection intensity and gonad and adductor muscle indices. The first four years of the study, were characterized by high infection intensity and very poor condition of the adductor muscle and gonads, whilst during subsequent years, infections gradually decreased and the condition of the scallops improved. Histopathological changes were restricted to the presence of apicomplexan zoites which were widely distributed, causing varying degrees of pathology in all organs. In heavy infections, muscular and connective tissues were totally necrotized, destroying significant parts of numerous organs, especially the adductor muscle, digestive gland and gonads. The progression of the disease was in good synchrony with the mortality rates and the subsequent decline observed in the scallop stock and recruitment indices. Our findings strongly suggest that the apicomplexan parasite played a major role in the collapse of the Iceland scallop stock in Breidafjordur. In addition to causing mortality, the infections significantly impact gonad development which contributes further to the collapse of the stock in the form of lower larval recruitment. Furthermore, compelling evidence exists that this apicomplexan pathogen is causing serious disease outbreaks in other scallop populations. Similar

  10. Habitat Characteristics Predicting Distribution and Abundance Patterns of Scallops in D’Entrecasteaux Channel, Tasmania

    PubMed Central

    Mendo, Tania; Lyle, Jeremy M.; Moltschaniwskyj, Natalie A.; Tracey, Sean R.; Semmens, Jayson M.

    2014-01-01

    Habitat characteristics greatly influence the patterns of distribution and abundance in scallops, providing structure for the settlement of spat and influencing predation risk and rates of survival. Establishing scallop-habitat relationships is relevant to understanding the ecological processes that regulate scallop populations and to managing critical habitats. This information is particularly relevant for the D’Entrecasteaux Channel, south-eastern Tasmania (147.335 W, 43.220 S), a region that has supported significant but highly variable scallop production over many years, including protracted periods of stock collapse. Three species of scallops are present in the region; the commercial scallop Pecten fumatus, the queen scallop Equichlamys bifrons, and the doughboy scallop Mimachlamys asperrima. We used dive surveys and Generalized Additive Modelling to examine the relationship between the distribution and abundance patterns of each species and associated habitat characteristics. The aggregated distribution of each species could be predicted as a function of sediment type and species-specific habitat structural components. While P. fumatus was strongly associated with finer sediments and E. bifrons with coarse grain sediments, M. asperrima had a less selective association, possibly related to its ability to attach on a wide range of substrates. Other habitat characteristics explaining P. fumatus abundance were depth, Asterias amurensis abundance, shell and macroalgae cover. Equichlamys bifrons was strongly associated with macroalgae and seagrass cover, whereas M. asperrima abundance was greatly explained by sponge cover. The models define a set of relationships from which plausible hypotheses can be developed. We propose that these relationships are mediated by predation pressure as well as the specific behavioural characteristics of each species. The findings also highlight the specific habitat characteristics that are relevant for spatial management and

  11. Is an Apicomplexan Parasite Responsible for the Collapse of the Iceland Scallop (Chlamys islandica) Stock?

    PubMed

    Kristmundsson, Árni; Erlingsdóttir, Ásthildur; Freeman, Mark A

    2015-01-01

    Due to the total and unexpected collapse of the Iceland scallop, Chlamys islandica, stocks around Iceland during the 2000s, a commercial fishing ban has been imposed on this valuable resource since 2003. Following the initial identification of an apicomplexan parasite in the scallops, a long-term surveillance program was established to evaluate the effect of the parasite on the population. The infections were highly prevalent in all shell sizes throughout the study. However, the parasite only impacts mature scallops where they cause severe macroscopic changes, characterized by an extensively diminished and abnormally coloured adductor muscle. A highly significant relationship was observed between infection intensity and gonad and adductor muscle indices. The first four years of the study, were characterized by high infection intensity and very poor condition of the adductor muscle and gonads, whilst during subsequent years, infections gradually decreased and the condition of the scallops improved. Histopathological changes were restricted to the presence of apicomplexan zoites which were widely distributed, causing varying degrees of pathology in all organs. In heavy infections, muscular and connective tissues were totally necrotized, destroying significant parts of numerous organs, especially the adductor muscle, digestive gland and gonads. The progression of the disease was in good synchrony with the mortality rates and the subsequent decline observed in the scallop stock and recruitment indices. Our findings strongly suggest that the apicomplexan parasite played a major role in the collapse of the Iceland scallop stock in Breidafjordur. In addition to causing mortality, the infections significantly impact gonad development which contributes further to the collapse of the stock in the form of lower larval recruitment. Furthermore, compelling evidence exists that this apicomplexan pathogen is causing serious disease outbreaks in other scallop populations. Similar

  12. Production of L-lactic Acid from Biomass Wastes Using Scallop Crude Enzymes and Novel Lactic Acid Bacterium

    NASA Astrophysics Data System (ADS)

    Yanagisawa, Mitsunori; Nakamura, Kanami; Nakasaki, Kiyohiko

    In the present study, biomass waste raw materials including paper mill sludge, bamboo, sea lettuce, and shochu residue (from a distiller) and crude enzymes derived from inedible and discarded scallop parts were used to produce L-lactic acid for the raw material of biodegradable plastic poly-lactic acid. The activities of cellulase and amylase in the crude enzymes were 22 and 170units/L, respectively, and L-lactic acid was produced from every of the above mentioned biomass wastes, by the method of liquid-state simultaneous saccharification and fermentation (SSF) . The L-lactic acid concentrations produced from sea lettuce and shochu residue, which contain high concentration of starch were 3.6 and 9.3g/L, respectively, and corresponded to greater than 25% of the conversion of glucans contained in these biomass wastes. Furthermore, using the solid state SSF method, concentrations as high as 13g/L of L-lactic acid were obtained from sea lettuce and 26g/L were obtained from shochu residue.

  13. SpSM30 gene family expression patterns in embryonic and adult biomineralized tissues of the sea urchin, Strongylocentrotus purpuratus.

    PubMed

    Killian, Christopher E; Croker, Lindsay; Wilt, Fred H

    2010-01-01

    The SpSM30 gene family of the sea urchin, Strongylocentrotus purpuratus, is comprised of six members, designated SpSM30A through SpSM30F (Livingston et al., 2006). The SpSM30 proteins are found uniquely in embryonic and adult mineralized tissues of the sea urchin. Previous studies have revealed that SpSM30 proteins are occluded within the embryonic endoskeleton and adult mineralized tissues (Killian and Wilt, 1996; Mann et al., 2008a,b; Urry et al., 2000). Furthermore, some of the SpSM30 proteins are among the most abundant of the approximately four-dozen integral matrix proteins of the larval spicule (Killian and Wilt, 1996). The amino acid sequence, protein domain architecture, and contiguity within the genome strongly support the supposition that the six genes constitute a gene family. Reverse transcription-polymerase chain reaction (RT-PCR) is used in the present study to describe the time course of expression of the family members during embryonic development, and their expression in adult tissues. SpSM30A, B, C and E are expressed, albeit at different levels, during overt spicule deposition in the embryo with some differences in the precise timing of expression. SpSM30D is not expressed in the embryo, and SpSM30F is expressed transiently and at low levels just prior to overt spicule formation. Whole mount in situ hybridization studies show that SpSM30A, B, C, and E are expressed exclusively in primary mesenchyme (PMC) cells and their descendants. In addition, tissue fractionation studies indicate that SpSM30F expression is highly enriched in PMCs. Each adult tissue examined expresses a different cohort of the SpSM30 family members at varying levels: SpSM30A mRNA is not expressed in adult tissues. Its expression is limited to the embryo. Conversely, SpSM30D mRNA is not expressed in the embryo, but is expressed in adult spines and teeth. SpSM30B and SpSM30C are expressed at modest levels in all mineralized adult tissues; SpSM30E is expressed highly in tooth and

  14. Daytime avoidance of chemosensory alarm cues by adult sea lamprey (Petromyzon marinus)

    USGS Publications Warehouse

    Di Rocco, Richard; Belanger, Cowan; Imre, István; Brown, Grant; Johnson, Nicholas S.

    2014-01-01

    Sea lamprey (Petromyzon marinus) avoid damage-released and predator chemosensory cues at night, but their response to these cues during the day is unknown. Here, we explored (i) whether sea lamprey avoid these cues during the day and (ii) the effect of water temperature on the avoidance of chemosensory alarm cues in two diurnal laboratory experiments. We hypothesized that daytime activity would be temperature-dependent and that only sea lamprey vulnerable to predation (i.e., not hiding) would behaviourally respond to chemosensory alarm cues. Ten groups of ten sea lamprey were exposed to one of a variety of potential chemosensory cues. The experiments were conducted over a range of temperatures to quantify the effect of temperature on avoidance behaviour. Consistent with our hypothesis, a higher proportion of animals were active during daytime as water temperature increased. Moving sea lamprey showed an avoidance response to 2-phenylethylamine (a compound found in mammalian urine) and human saliva once water temperatures had risen to mean (±SD) = 13.7 (±1.4) °C. Resting and hiding sea lamprey did not show an avoidance response to any of the experimental stimuli.

  15. Sequencing-based gene network analysis provides a core set of gene resource for understanding thermal adaptation in Zhikong scallop Chlamys farreri.

    PubMed

    Fu, X; Sun, Y; Wang, J; Xing, Q; Zou, J; Li, R; Wang, Z; Wang, S; Hu, X; Zhang, L; Bao, Z

    2014-01-01

    Marine organisms are commonly exposed to variable environmental conditions, and many of them are under threat from increased sea temperatures caused by global climate change. Generating transcriptomic resources under different stress conditions are crucial for understanding molecular mechanisms underlying thermal adaptation. In this study, we conducted transcriptome-wide gene expression profiling of the scallop Chlamys farreri challenged by acute and chronic heat stress. Of the 13 953 unique tags, more than 850 were significantly differentially expressed at each time point after acute heat stress, which was more than the number of tags differentially expressed (320-350) under chronic heat stress. To obtain a systemic view of gene expression alterations during thermal stress, a weighted gene coexpression network was constructed. Six modules were identified as acute heat stress-responsive modules. Among them, four modules involved in apoptosis regulation, mRNA binding, mitochondrial envelope formation and oxidation reduction were downregulated. The remaining two modules were upregulated. One was enriched with chaperone and the other with microsatellite sequences, whose coexpression may originate from a transcription factor binding site. These results indicated that C. farreri triggered several cellular processes to acclimate to elevated temperature. No modules responded to chronic heat stress, suggesting that the scallops might have acclimated to elevated temperature within 3 days. This study represents the first sequencing-based gene network analysis in a nonmodel aquatic species and provides valuable gene resources for the study of thermal adaptation, which should assist in the development of heat-tolerant scallop lines for aquaculture.

  16. In Utero Domoic Acid Toxicity: A Fetal Basis to Adult Disease in the California Sea Lion (Zalophus californianus)

    PubMed Central

    Ramsdell, John S.; Zabka, Tanja S.

    2008-01-01

    California sea lions have been a repeated subject of investigation for early life toxicity, which has been documented to occur with increasing frequency from late February through mid-May in association with organochlorine (PCB and DDT) poisoning and infectious disease in the 1970’s and domoic acid poisoning in the last decade. The mass early life mortality events result from the concentrated breeding grounds and synchronization of reproduction over a 28 day post partum estrus cycle and 11 month in utero phase. This physiological synchronization is triggered by a decreasing photoperiod of 11.48 h/day that occurs approximately 90 days after conception at the major California breeding grounds. The photoperiod trigger activates implantation of embryos to proceed with development for the next 242 days until birth. Embryonic diapause is a selectable trait thought to optimize timing for food utilization and male migratory patterns; yet from the toxicological perspective presented here also serves to synchronize developmental toxicity of pulsed environmental events such as domoic acid poisoning. Research studies in laboratory animals have defined age-dependent neurotoxic effects during development and windows of susceptibility to domoic acid exposure. This review will evaluate experimental domoic acid neurotoxicity in developing rodents and, aided by comparative allometric projections, will analyze potential prenatal toxicity and exposure susceptibility in the California sea lion. This analysis should provide a useful tool to forecast fetal toxicity and understand the impact of fetal toxicity on adult disease of the California sea lion. PMID:18728728

  17. Stage- and tissue-specific expression of two homeo box genes in sea urchin embryos and adults.

    PubMed

    Dolecki, G J; Wang, G; Humphreys, T

    1988-12-23

    We report the isolation of two different homeo box genes, HB3 and HB4, from the Hawaiian sea urchin Tripneustes gratilla. DNA sequencing revealed a definitive Antennapedia (Antp) class homeo box in each gene. Southern transfer hybridizations showed the genes to be single-copy. A 5.7-kb transcript of the HB3 gene was found in ovary, testis, small intestine and gastrula poly(A)+ RNA. The HB4 gene produces three transcripts. A 3.7-kb and a 4.4-kb transcript are expressed during embryogenesis. A 3.5-kb transcript appears in each of the adult tissues studied. The HB4 gene appears to be the sea urchin cognate of the Drosophila infrabdominal-7 (iab-7) gene, the mouse Hox 1.7 and Hox 3.2 genes and the Xenopus X1Hbox 6 gene. An examination of Antp class homeo box genes in deuterostomes indicates that a chromosomal duplication has taken place in the evolutionary line leading to the vertebrates after the divergence of the echinoderms. Thus, the sea urchin represents the primitive condition.

  18. Production of scallop shell nanoparticles by mechanical grinding as a formaldehyde adsorbent

    NASA Astrophysics Data System (ADS)

    Yamanaka, Shinya; Suzuma, Akifumi; Fujimoto, Toshiyuki; Kuga, Yoshikazu

    2013-04-01

    Scallop shells, which are a waste product in the seafood industry, are disposed more than 200,000 ton per year in Hokkaido, Japan. We report effective uses and simple application for discarded shells as a formaldehyde adsorbent. The adsorption performance of scallop shells to remove formaldehyde vapor is investigated. Planetary ball milling under dry conditions and subsequent water addition realize shells with a crystallite size (35-90 nm) and equivalent size of the specific surface area (41-191 nm) in the nanometer range. The comminution properties of the scallop shells, especially the grinding limit, are estimated via a semi-theoretical consideration for the grinding limit. Additionally, the adsorbed amount of gaseous formaldehyde using a self-designed adsorption line is estimated. The nanosized scallop shells exhibit an excellent adsorption performance rather than the feed shell, and the adsorbed amount is positively correlated with the specific surface area of the shell. Hence, scallop shells have potential to adsorb volatile organic compounds.

  19. Quantification of the indirect effects of scallop dredge fisheries on a brown crab fishery.

    PubMed

    Öndes, Fikret; Kaiser, Michel J; Murray, Lee G

    2016-08-01

    This study aimed to describe the characteristics of the by-catch of Cancer pagurus in king scallop dredges in the Isle of Man, and to determine the damage, immediate mortality and estimated mortality during fishing seasons associated with scallop dredges. Based on dredge surveys, spatial and seasonal variations were observed, with the highest number of crabs found off the west coast of the Isle of Man in the autumn when berried females crabs were most frequently caught. In general, female crabs comprised 84% of the catch. The damage levels of crabs was high with 45% of crabs recorded as crushed or dead or with severe damage, whilst 24% of crabs exhibited missing limbs. Estimates of the potential mortality associated with scallop dredging led to a lower and upper estimate of possible crab by-catch mortality of 15t and 24t respectively which represented 3.0-4.8% of the commercial landings of brown crab for the Isle of Man. Heaviest mortalities of crabs occurred in autumn to the west of the Isle of Man when female berried crabs move offshore into deeper water. The use of a temporary and spatially restricted scallop dredging closure could provide a simple solution to mitigate additional crab mortality in the event that scallop dredging increased beyond current levels in the future.

  20. Regional variation in bycatches associated with king scallop (Pecten maximus L.) dredge fisheries.

    PubMed

    Szostek, Claire L; Murray, Lee G; Bell, Ewen; Lambert, Gwladys; Kaiser, Michel J

    2017-02-01

    The biomass and composition of bycatch from king scallop dredge fisheries was assessed and compared between the English Channel, Cardigan Bay in Wales and around the Isle of Man. Bycatch composition varied significantly at localised, and broad, geographic scales. The mean proportion of scallop dredge bycatch biomass in the English Channel was 19% of total catch biomass. The proportion of bycatch was lower in Cardigan Bay (15%) but notably higher around the Isle of Man (53%). The proportion of individual bycatch species in dredge catches were low, therefore scallop dredging is unlikely to cause a substantial increase the population mortality of individual commercially fished species beyond that caused by the target fisheries for those species, or bycatches of other fisheries. The amount and mortality of organisms left on the seabed in the dredge path was not quantified in this study but should also be considered in management of the fishery. The discard rate of finfish and shellfish of commercial value from the king scallop dredge fishery in the English Channel was between 18 and 100%, with a higher rate of discarding occurring in the eastern English Channel compared to the west. The clear regional differences in bycatch composition and variation in the quantity of discards mean that an area by area approach to managing bycatch species is required in relation to the king scallop dredge fishery.

  1. Genomic Characterization of Interspecific Hybrids between the Scallops Argopecten purpuratus and A. irradians irradians

    PubMed Central

    Hu, Liping; Huang, Xiaoting; Mao, Junxia; Wang, Chunde; Bao, Zhenmin

    2013-01-01

    The Peruvian scallop (Argopecten purpuratus) has been introduced to China and has successfully been hybridized with the bay scallop (A. irradians irradians). The F1 hybrids of these two scallops exhibited a large increase in production traits and some other interesting new characteristics. To understand the genetic basis of this heterosis, nuclear gene and partial mtDNA sequences, and genomic in situ hybridization (GISH) were employed to analyze the genomic organization of the hybrids. Amplification of the ribosomal DNA internal transcribed spacer (ITS) showed that the parental ITS sequences were present in all the hybrid individuals, illustrating that the hybrid offspring inherited nuclear DNA from both parents. Sequence analyses of the ITS region further confirmed that the hybrids harbored alleles from their parents; some recombinant variants were also detected, which revealed some alterations in the nuclear genetic material of the hybrids. The analysis of mitochondrial 16S rDNA showed that the hybrids possessed sequences that were identical to the 16S rDNA of the female parents, proving a matrilineal inheritance of mitochondrial genes in scallops. In addition, GISH clearly discriminated between the parental chromosomes and indicated a combination of haploid genomes of duplex parents in the hybrids. The genetic analyses in our study illustrated that the F1 hybrids inherited nuclear material from both parents and cytoplasmic genetic material maternally, and some variations occurred in the genome, which might contribute to a further understanding of crossbreeding and heterosis in scallop species. PMID:23620828

  2. Pup Vibrissae Stable Isotopes Reveal Geographic Differences in Adult Female Southern Sea Lion Habitat Use during Gestation.

    PubMed

    Baylis, Alastair M M; Kowalski, Gabriele J; Voigt, Christian C; Orben, Rachael A; Trillmich, Fritz; Staniland, Iain J; Hoffman, Joseph I

    2016-01-01

    Individuals within populations often differ substantially in habitat use, the ecological consequences of which can be far reaching. Stable isotope analysis provides a convenient and often cost effective means of indirectly assessing the habitat use of individuals that can yield valuable insights into the spatiotemporal distribution of foraging specialisations within a population. Here we use the stable isotope ratios of southern sea lion (Otaria flavescens) pup vibrissae at the Falkland Islands, in the South Atlantic, as a proxy for adult female habitat use during gestation. A previous study found that adult females from one breeding colony (Big Shag Island) foraged in two discrete habitats, inshore (coastal) or offshore (outer Patagonian Shelf). However, as this species breeds at over 70 sites around the Falkland Islands, it is unclear if this pattern is representative of the Falkland Islands as a whole. In order to characterize habitat use, we therefore assayed carbon (δ13C) and nitrogen (δ15N) ratios from 65 southern sea lion pup vibrissae, sampled across 19 breeding colonies at the Falkland Islands. Model-based clustering of pup isotope ratios identified three distinct clusters, representing adult females that foraged inshore, offshore, and a cluster best described as intermediate. A significant difference was found in the use of inshore and offshore habitats between West and East Falkland and between the two colonies with the largest sample sizes, both of which are located in East Falkland. However, habitat use was unrelated to the proximity of breeding colonies to the Patagonian Shelf, a region associated with enhanced biological productivity. Our study thus points towards other factors, such as local oceanography and its influence on resource distribution, playing a prominent role in inshore and offshore habitat use.

  3. Pup Vibrissae Stable Isotopes Reveal Geographic Differences in Adult Female Southern Sea Lion Habitat Use during Gestation

    PubMed Central

    Baylis, Alastair M. M.; Kowalski, Gabriele J.; Voigt, Christian C.; Orben, Rachael A.; Trillmich, Fritz; Staniland, Iain J.; Hoffman, Joseph I.

    2016-01-01

    Individuals within populations often differ substantially in habitat use, the ecological consequences of which can be far reaching. Stable isotope analysis provides a convenient and often cost effective means of indirectly assessing the habitat use of individuals that can yield valuable insights into the spatiotemporal distribution of foraging specialisations within a population. Here we use the stable isotope ratios of southern sea lion (Otaria flavescens) pup vibrissae at the Falkland Islands, in the South Atlantic, as a proxy for adult female habitat use during gestation. A previous study found that adult females from one breeding colony (Big Shag Island) foraged in two discrete habitats, inshore (coastal) or offshore (outer Patagonian Shelf). However, as this species breeds at over 70 sites around the Falkland Islands, it is unclear if this pattern is representative of the Falkland Islands as a whole. In order to characterize habitat use, we therefore assayed carbon (δ13C) and nitrogen (δ15N) ratios from 65 southern sea lion pup vibrissae, sampled across 19 breeding colonies at the Falkland Islands. Model-based clustering of pup isotope ratios identified three distinct clusters, representing adult females that foraged inshore, offshore, and a cluster best described as intermediate. A significant difference was found in the use of inshore and offshore habitats between West and East Falkland and between the two colonies with the largest sample sizes, both of which are located in East Falkland. However, habitat use was unrelated to the proximity of breeding colonies to the Patagonian Shelf, a region associated with enhanced biological productivity. Our study thus points towards other factors, such as local oceanography and its influence on resource distribution, playing a prominent role in inshore and offshore habitat use. PMID:27304855

  4. Tetraploid induction by inhibiting mitosis I in scallop Chlamys farreri

    NASA Astrophysics Data System (ADS)

    Yang, Hui-Ping; Guo, Xi-Ming; Chen, Zai-Zhong; Wang, Yong-Ping

    1999-12-01

    Tetraploid induction was carried out by inhibiting mitosis I in fertilized eggs of Chlamys farreri. Mitosis I was blocked with cold shock (5 7°C), Cytochalasin B (0.75 mg/L) and 6-dimethylaminopurine (6-DMAP) (60 75 mg/L) when 60% fertilized eggs released polar body II at 20°C. At 4-cells embryo stage, the ploidy was determined by counting chromosome number. In control groups, most embryos were diploids (72.22%) and aneuploids (24.78%). In Cytochalasin B, cold shock and 6-DMAP treated groups, tetraploids were respectively 10.51%, 4.08%, and 13.34%; aneuploids were 43.10%, 35.93% and 29.16%, and triploids were 7.84%, 8.52% and 18.33%. At D-larva stage, ploidy was determined by flow cytometry (FCM). The ploidy analysis of day 2 larvae showed diploids in control group and also in three treated groups. Juvenile scallops (0.2 0.3cm) which were harvested in two control groups and two CB treated groups were all diploids through checking ploidy individually by FCM.

  5. Kinematics and critical swimming speed of juvenile scalloped hammerhead sharks

    PubMed

    Lowe

    1996-01-01

    Kinematics and critical swimming speed (Ucrit) of juvenile scalloped hammerhead sharks Sphyrna lewini were measured in a Brett-type flume (635 l). Kinematic parameters were also measured in sharks swimming in a large pond for comparison with those of sharks swimming in the flume. Sharks in the flume exhibited a mean Ucrit of 65±11 cm s-1 (± s.d.) or 1.17±0.21 body lengths per second (L s-1), which are similar to values for other species of sharks. In both the flume and pond, tailbeat frequency (TBF) and stride length (LS) increased linearly with increases in relative swimming speed (Urel=body lengths traveled per second). In the flume, tailbeat amplitude (TBA) decreased with increasing speed whereas TBA did not change with speed in the pond. Differences in TBF and LS between sharks swimming in the flume and the pond decreased with increases in Urel. Sharks swimming at slow speeds (e.g. 0.55 L s-1) in the pond had LS 19 % longer and TBF 21 % lower than sharks in the flume at the same Urel. This implies that sharks in the flume expended more energy while swimming at comparable velocities. Comparative measurements of swimming kinematics from sharks in the pond can be used to correct for effects of the flume on shark swimming kinematics and energetics.

  6. Integration of Next Generation Sequencing and EPR Analysis to Uncover Molecular Mechanism Underlying Shell Color Variation in Scallops

    PubMed Central

    Sun, Xiujun; Liu, Zhihong; Zhou, Liqing; Wu, Biao; Dong, Yinghui; Yang, Aiguo

    2016-01-01

    The Yesso scallop Patinopecten yessoensis displays polymorphism in shell colors, which is of great interest for the scallop industry. To identify genes involved in the shell coloration, in the present study, we investigate the transcriptome differences by Illumina digital gene expression (DGE) analysis in two extreme color phenotypes, Red and White. Illumina sequencing yields a total of 62,715,364 clean sequence reads, and more than 85% reads are mapped into our previously sequenced transcriptome. There are 25 significantly differentially expressed genes between Red and White scallops. EPR (Electron paramagnetic resonance) analysis has identified EPR spectra of pheomelanin and eumelanin in the red shells, but not in the white shells. Compared to the Red scallops, the White scallops have relatively higher mRNA expression in tyrosinase genes, but lower expression in other melanogensis-associated genes. Meantime, the relatively lower tyrosinase protein and decreased tyrosinase activity in White scallops are suggested to be associated with the lack of melanin in the white shells. Our findings highlight the functional roles of melanogensis-associated genes in the melanization process of scallop shells, and shed new lights on the transcriptional and post-transcriptional mechanisms in the regulation of tyrosinase activity during the process of melanin synthesis. The present results will assist our molecular understanding of melanin synthesis underlying shell color polymorphism in scallops, as well as other bivalves, and also help the color-based breeding in shellfish aquaculture. PMID:27563719

  7. Cytological comparison of gametogenesis of scallops, Argopecten irradians and Chlamys farreri

    NASA Astrophysics Data System (ADS)

    Dong, Xin-Hong; Liu, Bao-Zhong; Wu, Chang-Gong; Xiang, Jian-Hai

    2002-09-01

    Histological characteristics of gametogenesis of two kinds of scallops, gonochoric Chinese scallop, Chlamys farreri and hermaphroditic bay scallop, Argopecten irradians were investigated in this study. Spermatogenesis in C. farreri has different developmental stages: spermatogonia, primary spermatocyte, second spermatocyte, spermatid and spermatozoon. A large number of same developmental stage spermatic cells converge at a definite area of the testis. Premeiotic, previtellogenic and vitellogenic oocytes can be found during oogenesis in C. farreri, where oocyte distribution is obviously irregular. The A. irradians gonad consists of two different parts in one individual: one part functions as testis, the other as ovary. Between these two parts is a special appearance area, where a large number of spermatic cells are bound with two layers of acellular substance with many oocytes in it.

  8. The effects of water temperature on the energetic costs of juvenile and adult California sea lions (Zalophus californianus): the importance of skeletal muscle thermogenesis for thermal balance.

    PubMed

    Liwanag, H E M; Williams, T M; Costa, D P; Kanatous, S B; Davis, R W; Boyd, I L

    2009-12-01

    As highly mobile marine predators, many pinniped species routinely encounter a wide range of water temperatures during foraging and in association with seasonal, geographical and climatic changes. To determine how such variation in environmental temperature may impact energetic costs in otariids, we determined the thermal neutral zone of adult and juvenile California sea lions (Zalophus californianus) by measuring resting metabolic rate using open-flow respirometry. Five adult female (body mass range =82.2-107.2 kg) and four juvenile (body mass=26.2-36.5 kg) sea lions were examined over experimental water temperatures ranging from 0 to 20 degrees C (adults) or 5 to 20 degrees C (juveniles). The metabolic rate of adult sea lions averaged 6.4+/-0.64 ml O(2) kg(-1) min(-1) when resting within the thermal neutral zone. The lower critical temperature of adults was 6.4+/-2.2 degrees C, approximately 4 degrees C lower than sea surface temperatures routinely encountered off coastal California. In comparison, juvenile sea lions did not demonstrate thermal neutrality within the range of water temperatures examined. Resting metabolic rate of the younger animals, 6.3+/-0.53 ml O(2) kg(-1) min(-1), increased as water temperature approached 12 degrees C, and suggested a potential thermal limitation in the wild. To determine whether muscle thermogenesis during activity could mitigate this limitation, we measured the active metabolic rate of juveniles swimming at water temperature (T(water))=5, 12 and 20 degrees C. No significant difference (F=0.377, P=0.583) in swimming metabolic rate was found among water temperatures, suggesting that thermal disadvantages due to small body size in juvenile sea lions may be circumvented by recycling endogenous heat during locomotor activity.

  9. A C1q Domain Containing Protein from Scallop Chlamys farreri Serving as Pattern Recognition Receptor with Heat-Aggregated IgG Binding Activity

    PubMed Central

    Wang, Leilei; Wang, Lingling; Zhang, Huan; Zhou, Zhi; Siva, Vinu S.; Song, Linsheng

    2012-01-01

    Background The C1q domain containing (C1qDC) proteins refer to a family of all proteins that contain the globular C1q (gC1q) domain, and participate in a series of immune responses depending on their gC1q domains to bind a variety of self and non-self binding ligands. Methodology In the present study, the mRNA expression patterns, localization, and activities of a C1qDC protein from scallop Chlamys farreri (CfC1qDC) were investigated to understand its possible functions in innate immunity. The relative expression levels of CfC1qDC mRNA in hemocytes were all significantly up-regulated after four typical PAMPs (LPS, PGN, β-glucan and polyI:C) stimulation. During the embryonic development of scallop, the mRNA transcripts of CfC1qDC were detected in all the stages, and the expression level was up-regulated from D-hinged larva and reached the highest at eye-spot larva. The endogenous CfC1qDC was dominantly located in the hepatopancreas, gill, kidney and gonad of adult scallop through immunofluorescence. The recombinant protein of CfC1qDC (rCfC1qDC) could not only bind various PAMPs, such as LPS, PGN, β-glucan as well as polyI:C, but also enhance the phagocytic activity of scallop hemocytes towards Escherichia coli. Meanwhile, rCfC1qDC could interact with human heat-aggregated IgG, and this interaction could be inhibited by LPS. Conclusions All these results indicated that CfC1qDC in C. farreri not only served as a PRR involved in the PAMPs recognition, but also an opsonin participating in the clearance of invaders in innate immunity. Moreover, the ability of CfC1qDC to interact with immunoglobulins provided a clue to understand the evolution of classical pathway in complement system. PMID:22905248

  10. Recovery of cadmium from waste of scallop processing with amidoxime adsorbent synthesized by graft-polymerization

    NASA Astrophysics Data System (ADS)

    Shiraishi, Tomoyuki; Tamada, Masao; Saito, Kyouichi; Sugo, Takanobu

    2003-01-01

    Fabric adsorbent having amidoxime function was synthesized by radiation-induced graft-polymerization. This adsorbent was applied to the removal of Cd from the scallop waste. The scallop waste was homogenized as a pre-treatment. The obtained top layer was used for the Cd absorption experiment at various pH conditions. At pH 6, the adsorbent showed the highest performance in Cd adsorption. The concentration factor was thousand for Cd. Preliminary column experiment was also carried out. The amidoxime adsorbent recovered 96.1% of Cd in the waste solution.

  11. Cloning and Characterization of the Scalloped Region of Drosophila Melanogaster

    PubMed Central

    Campbell, S. D.; Duttaroy, A.; Katzen, A. L.; Chovnick, A.

    1991-01-01

    Viable mutants of the scalloped gene (sd) of Drosophila melanogaster exhibit defects that can include gapping of the wing margin and ectopic bristle formation on the wing. Lethal sd alleles characterized in the present study now implicate this gene in a genetic function essential for normal development. In order to further characterize the developmental role of this gene, we have undertaken to clone and characterize the region where sd maps. A P[ry(+)] transposon insertion at 13F associated with sd([ry+2216]) served as the starting point for a 42-kb chromosomal walk. Molecular lesions associated with viable and lethal sd alleles were characterized by genomic hybridization analysis as a means of defining the extent of the gene. DNA rearrangements associated with 11 viable sd alleles map to a 2-kb interval which appears to be a ``hot spot'' for P element activity. Four of five recessive lethal sd mutations were mapped by denaturing gradient gel electrophoresis to a region 12-14 kb away from the region of viable lesions. In a sd(+) genotype, at least two structurally related and developmentally regulated transcripts hybridize to the genomic region where several sd lethal alleles have been localized. A viable mutation, sd(58), used for comparison in the transcript analysis, makes at least two slightly smaller transcripts that also hybridize to this region. Preliminary analysis of cDNA clones has identified three structurally related transcripts that hybridize to this genomic region. The 5' end of these transcripts extends into the 2-kb genomic region wherein DNA rearrangements were seen in the P element rearrangements. We favor the view that the transcripts represented by these cDNA clones are products of the sd gene. If this is true, the sd gene would include genomic sequences extending over at least 14 kb of the described chromosomal walk, and would appear to be subject to alternative splicing. PMID:1706292

  12. Global phylogeography of the scalloped hammerhead shark (Sphyrna lewini).

    PubMed

    Duncan, K M; Martin, A P; Bowen, B W; DE Couet, H G

    2006-07-01

    Large marine fishes typically have little population genetic structure. The exceptions are associated with sedentary behaviour, disjunct distributions, or reproductive philopatry. Scalloped hammerhead sharks (Sphyrna lewini) incorporate the contrasting traits of oceanic habitat (usually associated with high dispersal) and possible fidelity to nursery grounds (for reproductive females). To evaluate the expectations of these contrasting behaviours, we examined the global genetic structure of S. lewini based on collections (n = 271 individuals) from 20 nursery areas. A 548-bp fragment of mitochondrial DNA control region revealed 22 polymorphic sites, 24 haplotypes, and three lineages distinguished by 2.56-3.77% sequence divergence. Coalescence analyses based on a provisional molecular clock indicate an origin in the Indo-West Pacific with late Pleistocene radiations into the central Pacific (Hawaii) and eastern Pacific (Central America), as well as recent interchange between oceans via southern Africa. Population subdivisions are strong (overall Phi(ST) = 0.749, P < 0.0001 and among oceans Phi(ST) = 0.598, P < 0.0098). Genetic discontinuity within oceans (Phi(ST) = 0.519, P < 0.0001) is primarily associated with oceanic barriers (migration across oceans M approximately 0), with much less structure along continental margins (M > 10). We conclude that nursery populations linked by continuous coastline have high connectivity, but that oceanic dispersal by females is rare. Although we cannot rule out philopatry to natal nurseries, oceanic barriers appear to have a much stronger influence on the genetic architecture of this species and may indicate a mechanism for recent evolutionary radiations in the genus Sphyrna.

  13. Bimodal Winter Haul-Out Patterns of Adult Weddell Seals (Leptonychotes weddellii) in the Southern Weddell Sea

    PubMed Central

    Fedak, Mike; Årthun, Marius; Nicholls, Keith; Robinson, Patrick; Costa, Dan; Biuw, Martin

    2016-01-01

    Hauling out is an essential component of pinniped life-history. Haul-out behaviour may be affected by biological (e.g. sex, age and condition) and physical factors (e.g. food availability and environmental conditions), and identifying these factors may help explain the spatio-temporal distribution and habitat use of pinnipeds. The aim of this study is to describe observed winter haul-out patterns of adult Weddell seals in the Weddell Sea and investigate the role of potential predictors to gain insight into the way these animals interact with the physical environment in this region. We examined the haul-out behaviour in relation to available biological (i.e., diving effort, sex) and physical information (i.e., sun angle). Thirty-three satellite telemetry tags were deployed on adult Weddell seals in the southern Weddell Sea during February 2007, 2009 and 2011, following their annual moult recording information on the behavioural mode of the animal: at surface, hauled out or diving. At the end of the austral summer Weddell seals spent, on average, more than 40% of their time hauled out on the ice. Under constant light conditions, it appears that physiological factors drive sex differences in the timing and duration of haul-out behaviour, with females spending on average more time hauled out than males during daylight hours. This time spent hauled-out declined to around 15% in both sexes by the beginning of autumn and remained at this level with a clear nocturnal haul-out pattern during the winter. The time spent diving increased during this period, indicating an increase in foraging effort during the winter months, and led to a common haul-out pattern in both sexes over winter. We found a positive relationship between haul-out duration and the percentage of time spent diving prior to a haul-out in both sexes, with the exception of female daytime haul-outs early in the year. PMID:27196097

  14. The olfactory system of migratory adult sea lamprey (Petromyzon marinus) is specifically and acutely sensitive to unique bile acids released by conspecific larvae

    PubMed Central

    1995-01-01

    Larval sea lamprey inhabit freshwater streams and migrate to oceans or lakes to feed after a radical metamorphosis; subsequently, mature adults return to streams to spawn. Previous observations suggested that lamprey utilize the odor of conspecific larvae to select streams for spawning. Here we report biochemical and electrophysiological evidence that this odor is comprised of two unique bile acids released by larvae. High performance liquid chromatography and mass spectrometry demonstrated that larval sea lamprey produce and release two unique bile acids, allocholic acid (ACA) and petromyzonol sulfate (PS). Electro-olfactogram (EOG) recording also demonstrated that the olfactory system of migratory adult sea lamprey is acutely and specifically sensitive to ACA and PS; detection thresholds for these compounds were approximately 10(-12) M. ACA and PS were the most potent of 38 bile acids tested and cross-adaptation experiments suggested that adult sea lamprey have specific olfactory receptor sites associated with independent signal transduction pathways for these bile acids. These receptor sites specifically recognize the key substituents of ACA and PS such as a 5 alpha-hydrogen, three axial hydroxyls, and a C-24 sulfate ester or carboxyl. In conclusion, the unique lamprey bile acids, ACA and PS, are potent and specific stimulants of the adult olfactory system, strongly supporting the hypothesis that these unique bile acids function as migratory pheromones in lamprey. PMID:7658193

  15. Expression of spicule matrix protein gene SM30 in embryonic and adult mineralized tissues of sea urchin Hemicentrotus pulcherrimus

    NASA Technical Reports Server (NTRS)

    Kitajima, T.; Tomita, M.; Killian, C. E.; Akasaka, K.; Wilt, F. H.

    1996-01-01

    We have isolated a cDNA clone for spicule matrix protein, SM30, from sea urchin Hemicentrotus pulcherrimus and have studied the expression of this gene in comparison with that of another spicule matrix protein gene, SM50. In cultured micromeres as well as in intact embryos transcripts of SM30 were first detectable around the onset of spicule formation and rapidly increased with the growth of spicules, which accompanied accumulation of glycosylated SM30 protein(s). When micromeres were cultured in the presence of Zn2+, spicule formation and SM30 expression were suppressed, while both events resumed concurrently after the removal of Zn2+ from the culture medium. Expression of SM50, in contrast, started before the appearance of spicules and was not sensitive to Zn2+. Differences were also observed in adult tissues; SM30 mRNA was detected in spines and tube feet but not in the test, while SM50 mRNA was apparent in all of these mineralized tissues at similar levels. These results strongly suggest that the SM30 gene is regulated by a different mechanism to that of the SM50 gene and that the products of these two genes are differently involved in sea urchin biomineralization. A possible role of SM30 protein in skeleton formation is discussed.

  16. A new species of Coryogalops (Perciformes: Gobiidae) and the first adult record of Feia nympha from the Red Sea.

    PubMed

    Kovačić, Marcelo; Bogorodsky, Sergey V; Mal, Ahmad O

    2016-03-31

    A new species of the gobiid genus Coryogalops, C. nanus sp. nov. is described from the Red Sea. Coryogalops nanus sp. nov. is distinguished from congeners in having dorsal-fin rays VI + I,10; anal-fin rays I,9; pectoral-fin rays 12-14 (lowest count known for the genus), two upper rays with free tips; pelvic fins I,5, joined to form an emarginate disc, no pelvic frenum; predorsal area and narrow area at base of first dorsal fin naked; longitudinal scale series 26-29; transverse scale rows counted forward 6-7; transverse scale rows counted backward 7-8; circumpeduncular scale rows 11-12; seven transverse suborbital rows of sensory papillae; no tentacle above upper eye margin; anterior nostril tubular, without flap at its tip, posterior nostril pore-like; body semitranslucent, covered with small scattered orange-yellow spots and speckles, those in predorsal area contain black dots; an internal row of white spots along ventral part of body above anal-fin base and on caudal peduncle; head with small scattered orange to yellowish brown spots; first dorsal fin with two broad white bands at base of fin and distally, and with hyaline area densely dotted with melanophores in the middle of fin; preserved specimens opaque white to yellowish with sparse melanophores. An adult specimen of Feia nympha is recorded for the first time in the Red Sea and the lateral line system of this species is described.

  17. Prevalence of oxygen desaturation and use of oxygen at home in adults at sea level and at moderate altitude.

    PubMed

    Perez-Padilla, R; Torre-Bouscoulet, L; Muiño, A; Marquez, M N; Lopez, M V; de Oca, M M; Talamo, C; Menezes, A M B

    2006-03-01

    The aim of this study was to determine the prevalence of oxygen desaturation in adults aged>or=40 yrs as altitude above sea level increases. A population-based, cross-sectional study with a multistage cluster sampling of 1,063 subjects from metropolitan Mexico City (Mexico; 2,240 m above sea level), 1,357 from Caracas (Venezuela; 950 m) and 943 from Montevideo (Uruguay; 35 m). The mean of six measurements of arterial oxygen saturation (SP,O2) was estimated using a pulse oximeter. Mean SP,O2 decreased with altitude. No subject from Montevideo had a mean SP,O288%. In conclusion, the prevalence of hypoxaemia was closely related to altitude. Priorities for oxygen prescription must be defined in moderate altitudes because it is unfeasible to provide it to all subjects fulfilling the criteria commonly used.

  18. Age and growth of the Scalloped Hammerhead shark, Sphyrna lewini (Griffith and Smith, 1834), from the southern Brazilian coast.

    PubMed

    Kotas, J E; Mastrochirico, V; Petrere Junior, M

    2011-08-01

    Age and growth studies for the scalloped hammerhead shark, Sphyrna lewini (Griffith and Smith, 1834) caught along the southern Brazilian coast, were based on ring measurements of vertebrae sections of 115 males, 116 females and 14 unknown sexed sharks between 48 and 344 cm total length (TL). The von Bertalanffy growth models were best fit using back-calculated data. The growth parameters obtained for males, were L∞ = 266 cm; K = 0.05/year; L0 = 47 cm. For females, L∞ = 300 cm; K = 0.05/year; L0 = 51 cm. An adult female reached 217 cm TL and was 31.5 years old. On the other hand, an adult male was 29.5 years old and measured 234 cm TL. Longevity estimate for males and females was 55 years. Therefore, S. lewini is a long-lived fish. Ageing precision, based on the IAPE index, was 5.6%. Marginal Increment analysis based on MIR index from hammerheads smaller than 105 cm, compared with the percentual of opaque and hyaline bands found per month ageing whole vertebrae, showed an annual ring formation, i.e., in winter.

  19. A half century of scalloping in the work habits of the United States Congress.

    PubMed

    Critchfield, Thomas S; Haley, Rebecca; Sabo, Benjamin; Colbert, Jorie; Macropoulis, Georgette

    2003-01-01

    It has been suggested that the work environment of the United States Congress bears similarity to a fixed-interval reinforcement schedule. Consistent with this notion, Weisberg and Waldrop (1972) described a positively accelerating pattern in annual congressional bill production (selected years from 1947 to 1968) that is reminiscent of the scalloped response pattern often attributed to fixed-interval schedules, but their analysis is now dated and does not bear on the functional relations that might yield scalloping. The present study described annual congressional bill production over a period of 52 years and empirically evaluated predictions derived from four hypotheses about the mechanisms that underlie scalloping. Scalloping occurred reliably in every year. The data supported several predictions about congressional productivity based on fixed-interval schedule performance, but did not consistently support any of three alternative accounts. These findings argue for the external validity of schedule-controlled operant behavior as measured in the laboratory. The present analysis also illustrates a largely overlooked role for applied behavior analysis: that of shedding light on the functional properties of behavior in uncontrolled settings of considerable interest to the public.

  20. Polyculture of scallop Chlamys farreri and kelp Laminaria japonica in Sungo Bay

    NASA Astrophysics Data System (ADS)

    Fang, Jian-Guang; Sun, Hui-Ling; Yan, Jing-Ping; Kuang, Shi-Huan; Li, Feng; Newkirk, Gary F.; Grant, Jon

    1996-12-01

    Several polyculture models of scallop Chlamys farreri and kelp Laminaria japonica currently employed in Sungo Bay and other parts of northern China are described in this paper. Economic benefits of different polyculture models are analysed based on the growth rate, culture density and market price. In addition, site selection, critical environmental conditions and polyculture problems are discussed in detail.

  1. Co-evolution of polygonal and scalloped terrains, southwestern Utopia Planitia, Mars

    NASA Astrophysics Data System (ADS)

    Haltigin, T. W.; Pollard, W. H.; Dutilleul, P.; Osinski, G. R.; Koponen, L.

    2014-02-01

    Thermal contraction crack polygons and scalloped depressions, two of the most common landforms found in Utopia Planitia, Mars, have previously been linked to the presence of ice-rich deposits in the subsurface. Although the formation and evolution of these features individually are relatively well understood, little to no effort has been directed towards elucidating possible interactions that occur between them during their development. Thus, the overarching goal of this research was to investigate if there is an evolutionary link between polygonal and scalloped terrains by correlating metrics representing polygon and scallop maturity. A variety of statistical analyses were performed using HiRISE and MOLA datasets to quantify interactions between four sets of polygonal and scalloped terrains. Our results demonstrate the existence of a negative relationship between polygonal subdivision and surface elevation, indicating that polygon networks become more ‘evolved’ as the surface subsides. These results suggest that the permafrost landscape in Utopia Planitia may once have been extremely ice-rich, and that multiple geomorphic processes may be responsible for its evolution. Ultimately, this work demonstrates that landscape reconstruction is more complete when a system approach is followed, quantifying interactions between landforms as opposed to examining an individual landform in isolation.

  2. Periodic Matrix Model to Evaluate Management Strategies for Bay Scallop (Argopectin iraddians) Populations

    EPA Science Inventory

    Within the last twenty years total harvests of bay scallops (Argopecten irradians) have dwindled in the southern New England Region, and one of the reasons often cited for this decline is drastic changes to their habitat, specifically eelgrass. To counteract these declines, bay ...

  3. 76 FR 61996 - Fishery Management Plan for the Scallop Fishery Off Alaska; Amendment 13

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-10-06

    ...) and accountability measures (AMs) to prevent overfishing in the target fishery for weathervane... absence of a statewide estimate of spawning biomass for weathervane scallops, the overfishing level (OFL... the Magnuson-Stevens Act relative to preventing overfishing and establishing an ABC and ACL....

  4. 50 CFR 648.64 - Yellowtail flounder sub-ACLs and AMs for the scallop fishery.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 12 2014-10-01 2014-10-01 false Yellowtail flounder sub-ACLs and AMs for...-ACLs and AMs for the scallop fishery. (a) As specified in § 648.55(d), and pursuant to the biennial... Georges Bank and Southern New England/Mid-Atlantic stocks of yellowtail flounder. The sub-ACLs for...

  5. 50 CFR 648.64 - Yellowtail flounder sub-ACLs and AMs for the scallop fishery.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 12 2013-10-01 2013-10-01 false Yellowtail flounder sub-ACLs and AMs for...-ACLs and AMs for the scallop fishery. (a) As specified in § 648.55(d), and pursuant to the biennial... Georges Bank and Southern New England/Mid-Atlantic stocks of yellowtail flounder. The sub-ACLs for...

  6. A half century of scalloping in the work habits of the United States Congress.

    PubMed Central

    Critchfield, Thomas S; Haley, Rebecca; Sabo, Benjamin; Colbert, Jorie; Macropoulis, Georgette

    2003-01-01

    It has been suggested that the work environment of the United States Congress bears similarity to a fixed-interval reinforcement schedule. Consistent with this notion, Weisberg and Waldrop (1972) described a positively accelerating pattern in annual congressional bill production (selected years from 1947 to 1968) that is reminiscent of the scalloped response pattern often attributed to fixed-interval schedules, but their analysis is now dated and does not bear on the functional relations that might yield scalloping. The present study described annual congressional bill production over a period of 52 years and empirically evaluated predictions derived from four hypotheses about the mechanisms that underlie scalloping. Scalloping occurred reliably in every year. The data supported several predictions about congressional productivity based on fixed-interval schedule performance, but did not consistently support any of three alternative accounts. These findings argue for the external validity of schedule-controlled operant behavior as measured in the laboratory. The present analysis also illustrates a largely overlooked role for applied behavior analysis: that of shedding light on the functional properties of behavior in uncontrolled settings of considerable interest to the public. PMID:14768667

  7. The Scallop's Eye--A Concave Mirror in the Context of Biology

    ERIC Educational Resources Information Center

    Colicchia, Giuseppe; Waltner, Christine; Hopf, Martin; Wiesner, Hartmut

    2009-01-01

    Teaching physics in the context of medicine or biology is a way to generate students' interest in physics. A more uncommon type of eye, the scallop's eye (an eye with a spherical concave mirror, which is similar to a Newtonian or Schmidt telescope) and the image-forming mechanism in this eye are described. Also, a simple eye model, which can…

  8. Effects of environmental oxygen deficiency on embryos and larvae of bay scallop, Argopecten irradians irradians

    NASA Astrophysics Data System (ADS)

    Chun-de, Wang; Fu-Sui, Zhang

    1995-12-01

    The experimental results showed that: 1) The embryonic development of bay scallop is inhibited at a dissolved oxygen range of 1.38-3.64×10-3 at 23°C, and completely blocked below the lower limit. 2) The tolerance of larvae to anoxia increased with larval sizes and was related to their oxygen debt. 3) The scallop larvae exhibited specific behavioral responses to oxygen deficiency, which finally led to velum disintegration and larval death. The possible relationship between environmental oxygen deficiency and the disease of disintegration of the larval velum is also discussed. In this study, considerable oxygen debt was found in bay scallop larvae, which was greater in small animals. Based on the works of previous authors, a new concept is proposed for the estimation of oxygen debt, namely, the compensatory rate of oxygen debt (CROD). This can be used in intra—or interspecific comparison of oxygen debt. The results can be helpful in the management of water quality and for the prevention of larval diseases encountered in scallop culture.

  9. Age, growth and maturity of the pelagic thresher Alopias pelagicus and the scalloped hammerhead Sphyrna lewini.

    PubMed

    Drew, M; White, W T; Dharmadi; Harry, A V; Huveneers, C

    2015-01-01

    Indonesia has the greatest reported chondrichthyan catches worldwide, with c.110,000 t caught annually. The pelagic thresher (Alopias pelagicus) and scalloped hammerhead (Sphryna lewini) together comprise about 25% of the total catches of sharks landed in Indonesia. Age and growth parameters were estimated for A. pelagicus and S. lewini from growth-band counts of thin-cut vertebral sections. Alopias pelagicus (n = 158) and S. lewini (n = 157) vertebrae were collected from three Indonesian fish markets over a 5 year period. A multi-model analysis was used to estimate growth parameters for both species. The models of best fit for males and females for A. pelagicus was the three-parameter logistic (L∞ = 3169 mm LT , k = 0·2) and the two-parameter von Bertalanffy models (L∞ = 3281 mm LT , k = 0·12). Age at maturity was calculated to be 10·4 and 13·2 years for males and females, respectively, and these are the oldest estimated for this species. The samples of S. lewini were heavily biased towards females, and the model of best fit for males and females was the three-parameter Gompertz (L∞ = 2598 mm LT , k = 0·15) and the two-parameter Gompertz (L∞ = 2896 mm LT , k= 0·16). Age at maturity was calculated to be 8·9 and 13·2 years for males and females, respectively. Although numerous age and growth studies have previously been undertaken on S. lewini, few studies have been able to obtain adequate samples from all components of the population because adult females, adult males and juveniles often reside in different areas. For the first time, sex bias in this study was towards sexually mature females, which are commonly lacking in previous biological studies on S. lewini. Additionally, some of the oldest aged specimens and highest age at maturity for both species were observed in this study. Both species exhibit slow rates of growth and late age at maturity, highlighting the need for a re-assessment of the relative resilience of these two

  10. Death in the octopus' garden: fatal blue-lined octopus envenomations of adult green sea turtles.

    PubMed

    Townsend, Kathy A; Altvater, Jens; Thomas, Michael C; Schuyler, Qamar A; Nette, Geoffrey W

    2012-01-01

    The blue-lined octopus Hapalochlaena fasciata contains the powerful neuromuscular blocker tetrodotoxin (TTX), which causes muscle weakness and respiratory failure. H. fasciata is regarded as one of the most venomous marine animals in the world, and multiple human fatalities have been attributed to the octopus. To date, there have been no recorded incidents of an envenomation of a wild animal. Here, we present a newly developed, multi-stage tandem mass spectrometry technique that provides unequivocal evidence for two cases of envenomation of two ~110 kg herbivorous green sea turtles by two tiny cryptic blue-lined octopuses (~4 cm body length). These cases of accidental ingestion provide evidence for the first time of the antipredator effect of TTX and highlight a previously unconsidered threat to turtles grazing within seagrass beds.

  11. Pharmacokinetic indices for cefovecin after single-dose administration to adult sea otters (Enhydra lutris).

    PubMed

    Lee, E A; Byrne, B A; Young, M A; Murray, M; Miller, M A; Tell, L A

    2016-12-01

    Seven sea otters received a single subcutaneous dose of cefovecin at 8 mg/kg body weight. Plasma samples were collected at predetermined time points and assayed for total cefovecin concentrations using ultra-performance liquid chromatography and tandem mass spectrometry. The mean (±SD) noncompartmental pharmacokinetic indices were as follows: CMax (obs) 70.6 ± 14.6 μg/mL, TMax (obs) 2.9 ± 1.5 h, elimination rate constant (kel ) 0.017 ± 0.002/h, elimination half-life (t1/2kel) 41.6 ± 4.7 h, area under the plasma concentration-vs.-time curve to last sample (AUClast) 3438.7 ± 437.7 h·μg/mL and AUC extrapolated to infinity (AUC0→∞ ) 3447.8 ± 439.0 h·μg/mL. The minimum inhibitory concentrations (MIC) for select isolates were determined and used to suggest possible dosing intervals of 10 days, 5 days, and 2.5 days for gram-positive, gram-negative, and Vibrio parahaemolyticus bacterial species, respectively. This study found a single subcutaneous dose of cefovecin sodium in sea otters to be clinically safe and a viable option for long-acting antimicrobial therapy.

  12. Scalloped terrains in the Peneus and Amphitrites Paterae region of Mars as observed by HiRISE

    NASA Astrophysics Data System (ADS)

    Lefort, A.; Russell, P. S.; Thomas, N.

    2010-01-01

    The Peneus and Amphitrites Paterae region of Mars displays large areas of smooth, geologically young terrains overlying a rougher and older topography. These terrains may be remnants of the mid-latitude mantle deposit, which is thought to be composed of ice-rich material originating from airfall deposition during a high-obliquity period less than 5 Ma ago. Within these terrains, there are several types of potentially periglacial features. In particular, there are networks of polygonal cracks and scalloped-shaped depressions, which are similar to features found in Utopia Planitia in the northern hemisphere. This area also displays knobby terrain similar to the so-called "basketball terrains" of the mid and high martian latitudes. We use recent high resolution images from the High Resolution Imaging Science Experiment (HiRISE) along with data from previous Mars missions to study the small-scale morphology of the scalloped terrains, and associated polygon network and knobby terrains. We compare these with the features observed in Utopia Planitia and attempt to determine their formation process. While the two sites share many general features, scallops in Peneus/Amphitrites Paterae lack the diverse polygon network (i.e. there is little variation in the polygon sizes and shapes) and large curvilinear ridges observed in Utopia Planitia. This points to a more homogeneous ice content within the substrate in the Peneus/Amphitrites Paterae region and implies that scallop formation is independent of polygon formation. This work shows that, as in Utopia Planitia, sublimation of interstitial ice is a likely process explaining the formation of the scalloped depressions in the region of Peneus/Amphitrites Paterae. Therefore, we provide a simplified scallop formation model based on sublimation of interstitial ice as proposed for Utopia Planitia. We also show that the differences in scallop morphologies between the two regions may be explained by differences in near-surface ice

  13. Roles for scalloped and vestigial in regulating cell affinity and interactions between the wing blade and the wing hinge.

    PubMed

    Liu, X; Grammont, M; Irvine, K D

    2000-12-15

    The scalloped and vestigial genes are both required for the formation of the Drosophila wing, and recent studies have indicated that they can function as a heterodimeric complex to regulate the expression of downstream target genes. We have analyzed the consequences of complete loss of scalloped function, ectopic expression of scalloped, and ectopic expression of vestigial on the development of the Drosophila wing imaginal disc. Clones of cells mutant for a strong allele of scalloped fail to proliferate within the wing pouch, but grow normally in the wing hinge and notum. Cells overexpressing scalloped fail to proliferate in both notal and wing-blade regions of the disc, and this overexpression induces apoptotic cell death. Clones of cells overexpressing vestigial grow smaller or larger than control clones, depending upon their distance from the dorsal-ventral compartment boundary. These studies highlight the importance of correct scalloped and vestigial expression levels to normal wing development. Our studies of vestigial-overexpressing clones also reveal two further aspects of wing development. First, in the hinge region vestigial exerts both a local inhibition and a long-range induction of wingless expression. These and other observations imply that vestigial-expressing cells in the wing blade organize the development of surrounding wing-hinge cells. Second, clones of cells overexpressing vestigial exhibit altered cell affinities. Our analysis of these clones, together with studies of scalloped mutant clones, implies that scalloped- and vestigial-dependent cell adhesion contributes to separation of the wing blade from the wing hinge and to a gradient of cell affinities along the dorsal-ventral axis of the wing.

  14. Changes in global DNA methylation intensity and DNMT1 transcription during the aging process of scallop Chlamys farreri

    NASA Astrophysics Data System (ADS)

    Lian, Shanshan; He, Yan; Li, Xue; Zhao, Bosong; Hou, Rui; Hu, Xiaoli; Zhang, Lingling; Bao, Zhenmin

    2015-08-01

    DNA methylation is an important epigenetic regulatory mechanism that influences genomic stability, gene activation, X-chromosome inactivation and other factors. A change in DNA methylation is usually associated with aging and cellular senescence. DNA methyltransferase 1 (DNMT1) is the most abundant DNA methyltransferase, and it plays an important role in maintaining the established methylation pattern during DNA replication in vertebrates. Although the effect of aging on DNA methylation has been well studied in vertebrates, little research has been conducted in invertebrates, especially in marine bivalves. In this study, we examined global DNA methylation levels in four groups of adult Zhikong scallop Chlamys farreri at different ages. The results showed that both the age and tissue type had a strong effect on the DNA methylation. In addition, a significant decrease in DNA methylation with aging (1-4 years) can be detected in mantle, kidney and hepatopancreas. We further measured the change in DNMT1 transcript abundance using quantitative reverse transcription PCR (qRT-PCR), which revealed that DNMT1 transcription significantly decreased with aging in mantle and hepatopancreas and strongly correlated with DNA methylation ( R = 0.72). Our data provided greater insight into the aging-related decline of DNA methylation, which could aid in gaining a better understanding of the relationship between DNA methylation and the aging process in bivalve mollusks.

  15. Development of method to remove weld scallop and ceramic backing material of wedge type and its application

    NASA Astrophysics Data System (ADS)

    Kang, Sung-Koo; Yang, Jong-Soo; Kim, Ho-Kyung

    2015-06-01

    The weld scallop has been used for joining T-bars. There are a lot of weld scallops in shipbuilding. It is difficult to perform scallop welding due to the inconvenient welding position. This results in many problems such as porosity, slag inclusion, etc. In this study, a new method is devised to remove weld scallops by incorporating a Ceramic Backing Material (CBM). The weld scallop is removed by an elongation of the v groove. In order to insert a CBM into the groove without a weld scallop, a wedge-shaped CBM is developed. The top side of the developed CBM is similar to the shape of a general back bead. The bottom surface has a saw-toothed shape for cutting at a suitable length. This can be attached to the root side of a face plate using adhesive tape, just like a general CBM. Welding experiments in normal and abnormal conditions are carried out and the possibility of burn-through is examined. This CBM's applicability to shipbuilding is verified.

  16. Binding of the Vestigial co-factor switches the DNA-target selectivity of the Scalloped selector protein.

    PubMed

    Halder, G; Carroll, S B

    2001-09-01

    The formation and identity of organs and appendages are regulated by specific selector genes that encode transcription factors that regulate potentially large sets of target genes. The DNA-binding domains of selector proteins often exhibit relatively low DNA-binding specificity in vitro. It is not understood how the target selectivity of most selector proteins is determined in vivo. The Scalloped selector protein controls wing development in Drosophila by regulating the expression of numerous target genes and forming a complex with the Vestigial protein. We show that binding of Vestigial to Scalloped switches the DNA-binding selectivity of Scalloped. Two conserved domains of the Vestigial protein that are not required for Scalloped binding in solution are required for the formation of the heterotetrameric Vestigial-Scalloped complex on DNA. We suggest that Vestigial affects the conformation of Scalloped to create a wing cell-specific DNA-binding selectivity. The modification of selector protein DNA-binding specificity by co-factors appears to be a general mechanism for regulating their target selectivity in vivo.

  17. Formation and Evolution of Scalloped Depressions on Malea Planum and the southern rim of the Hellas Basin, Mars

    NASA Astrophysics Data System (ADS)

    Zanetti, M.; Hiesinger, H.; Reiss, D.; Neukum, G.

    2008-09-01

    Introduction: Scalloped depressions are an erosional surface morphology characterized as a type of dissected mantle terrain by Milliken and Mustard [1]. They are identified by their asymmetrical north-south profile which shows a steep pole-facing scarp, a flat floor, and a gentle equator-facing slope which grades into the surrounding terrain [1]. They are found in latitudedependent, ice-rich surface mantles in both the northern and southern hemispheres [1]. The mantle material is presumably composed of atmospherically derived dust and water ice, and is thought to be related to obliquity-driven ice activity as recently as 2.1-0.4 Myr ago [3]. Previous researchers, [e.g. 1,2,4-7] have attributed the formation of scallops to the sublimation of interstitial ice. Morgenstern et al. [6] suggested that the asymmetric profile of scallops can be explained by enhanced solar insolation on the equator-facing slope which leads to enhanced sublimation of interstial ice and thereby increases the area of the depression. By this process they can also grow and coalesce to form large degraded areas [6]. Building on our previous work [7], we investigate this hypothesis using HiRISE and THEMIS-IR images. We also propose a hypothesis for the nucleation and evolution of scallops. Previous Work: Our previous work surveyed the southern hemisphere using HRSC images for the presence of scalloped terrain, and revealed that almost all scalloped terrains are in the Malea Planum region near the southern wall of the Hellas basin [7]. We mapped the distribution of scalloped terrain between 50° and 70° E and 50° and 70° S. The results of the map showed that the scalloped terrains contour the southern wall of the Hellas basin between the elevations of 1000 m and -2000 m, and that the icerich mantle is thickest in this region [7]. Data and Methods: High resolution HiRISE images of the scalloped terrain of Malea Planum were used to investigate small scale features. Daytime infrared images from

  18. In the darkness of the polar night, scallops keep on a steady rhythm

    PubMed Central

    Tran, Damien; Sow, Mohamedou; Camus, Lionel; Ciret, Pierre; Berge, Jorgen; Massabuau, Jean-Charles

    2016-01-01

    Although the prevailing paradigm has held that the polar night is a period of biological quiescence, recent studies have detected noticeable activity levels in marine organisms. In this study, we investigated the circadian rhythm of the scallop Chlamys islandica by continuously recording the animal’s behaviour over 3 years in the Arctic (Svalbard). Our results showed that a circadian rhythm persists throughout the polar night and lasts for at least 4 months. Based on observations across three polar nights, we showed that the robustness and synchronicity of the rhythm depends on the angle of the sun below the horizon. The weakest rhythm occurred at the onset of the polar night during the nautical twilight. Surprisingly, the circadian behaviour began to recover during the darkest part of the polar night. Because active rhythms optimize the fitness of an organism, our study brings out that the scallops C. islandica remain active even during the polar night. PMID:27577847

  19. Mapping toll-like receptor signaling pathway genes of Zhikong scallop ( Chlamys farreri) with FISH

    NASA Astrophysics Data System (ADS)

    Zhao, Bosong; Zhao, Liang; Liao, Huan; Cheng, Jie; Lian, Shanshan; Li, Xuan; Huang, Xiaoting; Bao, Zhenmin

    2015-12-01

    Toll-like receptor (TLR) signaling pathway plays a pivotal role in the innate immune system. Studies on TLR signaling pathway genes in Zhikong scallop ( Chlamys farreri) have mainly focused on sequence analysis and expression profiling, no research has been carried out on their localization. The chromosomal position of TLR signaling pathway genes can be valuable for assemblying scallop genome and analysizing gene regulatory networks. In the present study, five key TLR signaling pathway genes ( CfTLR, CfMyd88, CfTRAF6, CfNFκB, and CfIκB) containing bacterial artificial chromosomes (BACs) were isolated and physically mapped through fluorescence in situ hybridization on five non-homologous chromosome pairs, showing a similar distribution to another five model species. The isolation and mapping of these key immune genes of C. farreri will aid to the research on innate immunity, assignment of interested genes to chromosomes, and integration of physical, linkage and cytogenetic maps of this species.

  20. In the darkness of the polar night, scallops keep on a steady rhythm

    NASA Astrophysics Data System (ADS)

    Tran, Damien; Sow, Mohamedou; Camus, Lionel; Ciret, Pierre; Berge, Jorgen; Massabuau, Jean-Charles

    2016-08-01

    Although the prevailing paradigm has held that the polar night is a period of biological quiescence, recent studies have detected noticeable activity levels in marine organisms. In this study, we investigated the circadian rhythm of the scallop Chlamys islandica by continuously recording the animal’s behaviour over 3 years in the Arctic (Svalbard). Our results showed that a circadian rhythm persists throughout the polar night and lasts for at least 4 months. Based on observations across three polar nights, we showed that the robustness and synchronicity of the rhythm depends on the angle of the sun below the horizon. The weakest rhythm occurred at the onset of the polar night during the nautical twilight. Surprisingly, the circadian behaviour began to recover during the darkest part of the polar night. Because active rhythms optimize the fitness of an organism, our study brings out that the scallops C. islandica remain active even during the polar night.

  1. Proteomic analysis of scallop hepatopancreatic extract provides insights into marine polysaccharide digestion

    PubMed Central

    Lyu, Qianqian; Jiao, Wenqian; Zhang, Keke; Bao, Zhenmin; Wang, Shi; Liu, Weizhi

    2016-01-01

    Marine polysaccharides are used in a variety of applications, and the enzymes that degrade these polysaccharides are of increasing interest. The main food source of herbivorous marine mollusks is seaweed, and several polysaccharide-degrading enzymes have been extracted from mollusk digestive glands (hepatopancreases). Here, we used a comprehensive proteomic approach to examine the hepatopancreatic proteins of the Zhikong scallop (Chlamys farreri). We identified 435 proteins, the majority of which were lysosomal enzymes and carbohydrate and protein metabolism enzymes. However, several new enzymes related to polysaccharide metabolism were also identified. Phylogenetic and structural analyses of these enzymes suggest that these polysaccharide-degrading enzymes may have a variety of potential substrate specificities. Taken together, our study characterizes several novel polysaccharide-degrading enzymes in the scallop hepatopancreas and provides an enhanced view of these enzymes and a greater understanding of marine polysaccharide digestion. PMID:27982037

  2. A Theoretical Investigation of Hydrodynamic Impact Loads on Scalloped-Bottom Seaplanes and Comparisons with Experiment

    NASA Technical Reports Server (NTRS)

    Milwitzky, Benjamin

    1947-01-01

    An analytical method is presented for calculating the hydrodynamic impact loads and motions experienced by seaplane floats and hulls with scalloped (fluted) bottoms. The analysis treats vertical impact at zero trim in addition to the more general problem of the step impact of a seaplane at positive trim where the flight path is oblique to the keel and to the water surface. Also considered are the transformations required to represent impacts into waves.

  3. 50 CFR 648.64 - Yellowtail flounder sub-ACLs and AMs for the scallop fishery.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 12 2012-10-01 2012-10-01 false Yellowtail flounder sub-ACLs and AMs for...-ACLs and AMs for the scallop fishery. (a) As specified in § 648.55(d), and pursuant to the biennial... specified in § 648.90(a)(4)(iii)(C) of the NE multispecies regulations, the sub-ACLs for the 2011...

  4. Thermokarst in Siberian ice-rich permafrost: Comparison to asymmetric scalloped depressions on Mars

    NASA Astrophysics Data System (ADS)

    Ulrich, M.; Morgenstern, A.; Günther, F.; Reiss, D.; Bauch, K. E.; Hauber, E.; Rössler, S.; Schirrmeister, L.

    2010-10-01

    On Earth, the thawing of permafrost deposits with high-ground ice content results in massive surface subsidence and the formation of characteristic large thermokarst depressions. Slope asymmetries within thermokarst depressions suggest lateral growth, which occurs due to thermoerosion and gravimetric mass wasting along these slopes. It has been proposed that rimless, asymmetrically shaped depressions (called scalloped depressions) on Mars were formed by insolation-driven ground ice sublimation. We investigated a large thermokarst depression in ice complex deposits in the Siberian Arctic as a terrestrial analogue for scalloped depressions in Martian volatile-rich mantle deposits. Our results from field studies, insolation modeling, and geomorphometric analyses suggest lateral thermokarst development in a northern direction. This conclusion is obvious due to steeper slope angles of the south facing slopes. Insolation and surface temperatures are crucial factors directly influencing thermokarst slope stability and steepness. Comparative analyses of Martian scalloped depressions in Utopia Planitia were conducted using high-resolution (High-Resolution Imaging Science Experiment, Context Camera) and thermal infrared (Thermal Emission Imaging System) satellite data. By direct analogy, we propose that the lateral scalloped depression development on Mars was primarily forced on the steep pole-facing slopes in the equator-ward direction. Insolation modeling confirms that this must have happened in the last 10 Ma during an orbital configuration of higher obliquity than today. Development would have been maximized if the orbit was both highly oblique and highly eccentric, and/or the Martian summer coincided with perihelion. Relatively short events of increasing sublimation or even thawing of ground ice led to fast slumping processes on the steep pole-facing slopes.

  5. Marine Toxin Okadaic Acid Affects the Immune Function of Bay Scallop (Argopecten irradians).

    PubMed

    Chi, Cheng; Giri, Sib Sankar; Jun, Jin Woo; Kim, Hyoun Joong; Yun, Saekil; Kim, Sang Guen; Park, Se Chang

    2016-08-24

    Okadaic acid (OA) is produced by dinoflagellates during harmful algal blooms and is a diarrhetic shellfish poisoning toxin. This toxin is particularly problematic for bivalves that are cultured for human consumption. This study aimed to reveal the effects of exposure to OA on the immune responses of bay scallop, Argopecten irradians. Various immunological parameters were assessed (total hemocyte counts (THC), reactive oxygen species (ROS), malondialdehyde (MDA), glutathione (GSH), lactate dehydrogenase (LDH), and nitric oxide (NO) in the hemolymph of scallops at 3, 6, 12, 24, and 48 h post-exposure (hpe) to different concentrations of OA (50, 100, and 500 nM). Moreover, the expression of immune-system-related genes (CLT-6, FREP, HSP90, MT, and Cu/ZnSOD) was also measured. Results showed that ROS, MDA, and NO levels and LDH activity were enhanced after exposure to different concentrations of OA; however, both THC and GSH decreased between 24-48 hpe. The expression of immune-system-related genes was also assessed at different time points during the exposure period. Overall, our results suggest that exposure to OA had negative effects on immune system function, increased oxygenic stress, and disrupted metabolism of bay scallops.

  6. Using a multiscale image processing method to characterize the periodic growth patterns on scallop shells.

    PubMed

    Xing, Qiang; Wei, Tengda; Chen, Zhihui; Wang, Yangfan; Lu, Yuan; Wang, Shi; Zhang, Lingling; Bao, Zhenmin

    2017-03-01

    The fine periodic growth patterns on shell surfaces have been widely used for studies in the ecology and evolution of scallops. Modern X-ray CT scanners and digital cameras can provide high-resolution image data that contain abundant information such as the shell formation rate, ontogenetic age, and life span of shellfish organisms. We introduced a novel multiscale image processing method based on matched filters with Gaussian kernels and partial differential equation (PDE) multiscale hierarchical decomposition to segment the small tubular and periodic structures in scallop shell images. The periodic patterns of structures (consisting of bifurcation points, crossover points of the rings and ribs, and the connected lines) could be found by our Space-based Depth-First Search (SDFS) algorithm. We created a MATLAB package to implement our method of periodic pattern extraction and pattern matching on the CT and digital scallop images available in this study. The results confirmed the hypothesis that the shell cyclic structure patterns encompass genetically specific information that can be used as an effective invariable biomarker for biological individual recognition. The package is available with a quick-start guide and includes three examples: http://mgb.ouc.edu.cn/novegene/html/code.php.

  7. Inheritance of the general shell color in the scallop Argopecten purpuratus (Bivalvia: Pectinidae).

    PubMed

    Winkler, F M; Estévez, B F; Jollán, L B; Garrido, J P

    2001-01-01

    Although some external coloration and pigmentation patterns in molluscan shells may be attributable to environmental factors, most variation in these phenotypic characters depends on uncomplicated genetic mechanisms. Genetic research on inheritance of color variations in the north-Chilean scallop (Argopecten purpuratus) has now been expanded to analyze color segregation in juvenile scallops produced under controlled conditions employing self- and cross-fertilization. Calculations from the results were used for comparison with different numerical models based on Mendelian inheritance, and results were also obtained on the inheritance of a dorsoventral white line often observed on the left (upper) valve in this species. The results confirmed the hereditary basis for color variation in the shell of this scallop, suggesting a simple, dominant model of epistasis to explain the distribution of the different color variants observed (purple, brown, orange, yellow, and white). The presence of the white line may be controlled by a recessive allele with simple Mendelian traits on a locus distinct from those that control color variation.

  8. Reducing scalloping in synthetic aperture radar images using a composite image transform

    NASA Astrophysics Data System (ADS)

    Landmark, Knut; Solberg, Anne H. S.

    2015-10-01

    In burst mode SAR imaging, echo intensity depends on the target's azimuth position in the antenna pattern. As a result, an amplitude modulation known as scalloping may appear, particularly in ScanSAR images of ocean areas. A denoising method, recently developed for multibeam bathymetry, can be used to reduce residual scalloping in ScanSAR images. The algorithm is analogous to a band-stop filter in the frequency domain. Here, the transform is the composition of an edge detection operator and a discrete Radon transform (DRT). The edge operator accentuates fine-scale intensity changes; the DRT focuses linear features, as each DRT component is the sum of pixel intensities along a linear graph. A descalloping filter is implemented in the DRT domain by suppressing the range direction. The restored image is obtained by applying the inverse composite transform. First, a rapidly converging iterative pseudo-inverse DRT is computed. The edge operator is a spatial filter based on a discrete approximation of the Laplace operator, but modified to make the operator invertible. The method was tested on ocean scene ScanSAR images from the Envisat Advanced Synthetic Aperture Radar. The scalloping effect was significantly reduced, with no apparent distortion or smoothing of physical features.

  9. Isolation and characterization of melanin pigment from yesso scallop Patinopecten yessoensis

    NASA Astrophysics Data System (ADS)

    Sun, Xiujun; Wu, Biao; Zhou, Liqing; Liu, Zhihong; Dong, Yinghui; Yang, Aiguo

    2017-04-01

    Melanin is one of the essential compounds in the pigments of molluscan shells. However, the effects of melanin on color variations in molluscs are largely unknown. Our previous study suggests that Yesso scallop Patinopecten yessoensis might contain melanin pigment in the dark brown shell. We therefore isolated melanin from the pigmented shells using hydrochloric acid method, and characterized the types of melanin pigments by spectrophotometry. The purified melanin, which was verified by spectrophotometry scanning and HPLC analysis, showed the typical characteristics of melanin absorption spectra and HPLC chromatograms. The contents of pheomelanin and eumelanin in pigmented shells, which were determined by the linear standard curve of melanin at 405 nm and 350 nm absorbance, were 48.23 ± 1.350 and 157.65 ± 5.905 mg, respectively. The present results indicate that the brown-pigmented shells of scallops comprise approximately 76.6% of eumelanin and 23.4% of pheomelanin, which supports the presence of eumelanin-rich pigment in scallop shells. Therefore, the combination of hydrochloric acid extraction and spectrophotometric quantification is a rapid and efficient method to isolate and quantify melanin in shells. This will facilitate the melanin studies related to shell color polymorphism and the selective breeding of bivalves with different shell colors.

  10. 78 FR 27088 - Fisheries of the Northeastern United States; Atlantic Sea Scallop Fishery and Northeast...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-05-09

    ... Gilbert, Fishery Policy Analyst, 978-281-9244; fax 978-281-9135. SUPPLEMENTARY INFORMATION: Background The... response to the proposed rule from: Congressman William R. Keating, the executive director of the...

  11. 50 CFR 648.60 - Sea scallop access area program requirements.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... specified in § 648.51(a) and (b). (ii) Vessels fishing in the Closed Area I, Closed Area II, and Nantucket... Closed Area I Access Area are 111,540 lb (51 mt) and 36,000 lb (316 mt), respectively. (iii) Closed Area... Area I Access Area are 111,540 lb (51 mt) and 72,000 lb (33 mt), respectively. (2) Increase in...

  12. 77 FR 64915 - Fisheries of the Northeastern United States; Atlantic Sea Scallop Fishery; Emergency Rule...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-10-24

    ... on November 10, 2012. Specifically, this temporary rule extends the 180- day closure of the DMV in fishing year (FY) 2012 for an additional 186 days, through May 13, 2013. DATES: This rule is effective from November 10, 2012, through May 14, 2013. The expiration date of the temporary rule published...

  13. 78 FR 16573 - Fisheries of the Northeastern United States; Atlantic Sea Scallop Fishery and Northeast...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-03-15

    ...(d) of the Magnuson-Stevens Fishery Conservation and Management Act (MSA), which provides that the... Overfishing Limit (OFL), Acceptable Biological Catch (ABC), Annual Catch Limits (ACLs), Annual Catch Targets... activity. As a result of the updated Biological Opinion, which includes updated reasonable and...

  14. 76 FR 31491 - Fisheries of the Northeastern United States; Atlantic Sea Scallop Fishery; Closure of the...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-01

    ... Amendment 15 and Framework 22, addressing the NLS closure issue in a timely fashion through Council action.... ACTION: Temporary rule; emergency action. SUMMARY: NMFS issues this temporary rule pursuant to its.... Comments must be received by July 1, 2011. ADDRESSES: The Environmental Assessment (EA) is available...

  15. A cross-sectional study of differences in 6-min walk distance in healthy adults residing at high altitude versus sea level

    PubMed Central

    2014-01-01

    Background We sought to determine if adult residents living at high altitude have developed sufficient adaptation to a hypoxic environment to match the functional capacity of a similar population at sea level. To test this hypothesis, we compared the 6-min walk test distance (6MWD) in 334 residents living at sea level vs. at high altitude. Methods We enrolled 168 healthy adults aged ≥35 years residing at sea level in Lima and 166 individuals residing at 3,825 m above sea level in Puno, Peru. Participants completed a 6-min walk test, answered a sociodemographics and clinical questionnaire, underwent spirometry, and a blood test. Results Average age was 54.0 vs. 53.8 years, 48% vs. 43% were male, average height was 155 vs. 158 cm, average blood oxygen saturation was 98% vs. 90%, and average resting heart rate was 67 vs. 72 beats/min in Lima vs. Puno. In multivariable regression, participants in Puno walked 47.6 m less (95% CI -81.7 to -13.6 m; p < 0.01) than those in Lima. Other variables besides age and height that were associated with 6MWD include change in heart rate (4.0 m per beats/min increase above resting heart rate; p < 0.001) and percent body fat (-1.4 m per % increase; p = 0.02). Conclusions The 6-min walk test predicted a lowered functional capacity among Andean high altitude vs. sea level natives at their altitude of residence, which could be explained by an incomplete adaptation or a protective mechanism favoring neuro- and cardioprotection over psychomotor activity. PMID:24484777

  16. Offshore Habitat Preference of Overwintering Juvenile and Adult Black Sea Bass, Centropristis striata, and the Relationship to Year-Class Success

    PubMed Central

    Miller, Alicia S.; Shepherd, Gary R.; Fratantoni, Paula S.

    2016-01-01

    Black sea bass (Centropristis striata) migrations are believed to play a role in overwinter survival and connectivity between juvenile and adult populations. This study investigated oceanographic drivers of winter habitat choice and regional differences between populations of juvenile and adult black sea bass. Trends in cohort strength, as a result of juvenile survival, were also identified. Oceanographic and fisheries survey data were analyzed using generalized additive models. Among the oceanographic variables investigated, salinity was the main driver in habitat selection with an optimal range of 33–35 practical salinity units (PSU) for both juveniles and adults. Preferred temperature ranges varied between juveniles and adults, but held a similar minimum preference of >8°C. Salinity and temperature ranges also differed by regions north and south of Hudson Canyon. Shelf water volume had less of an effect than temperature or salinity, but showed an overall negative relationship with survey catch. The effect of winter conditions on juvenile abundance was also observed across state and federal survey index trends. A lack of correlation observed among surveys in the fall paired with a strong correlation in the spring identifies the winter period as a factor determining year-class strength of new recruits to the population. A rank order analysis of spring indices identified three of the largest year classes occurring during years with reduced shelf water volumes, warmer winter shelf waters, and a 34 PSU isohaline aligned farther inshore. While greater catches of black sea bass in the northwest Atlantic Ocean remain south of Hudson Canyon, the species’ range has expanded north in recent years. PMID:26824350

  17. Offshore Habitat Preference of Overwintering Juvenile and Adult Black Sea Bass, Centropristis striata, and the Relationship to Year-Class Success.

    PubMed

    Miller, Alicia S; Shepherd, Gary R; Fratantoni, Paula S

    2016-01-01

    Black sea bass (Centropristis striata) migrations are believed to play a role in overwinter survival and connectivity between juvenile and adult populations. This study investigated oceanographic drivers of winter habitat choice and regional differences between populations of juvenile and adult black sea bass. Trends in cohort strength, as a result of juvenile survival, were also identified. Oceanographic and fisheries survey data were analyzed using generalized additive models. Among the oceanographic variables investigated, salinity was the main driver in habitat selection with an optimal range of 33-35 practical salinity units (PSU) for both juveniles and adults. Preferred temperature ranges varied between juveniles and adults, but held a similar minimum preference of >8°C. Salinity and temperature ranges also differed by regions north and south of Hudson Canyon. Shelf water volume had less of an effect than temperature or salinity, but showed an overall negative relationship with survey catch. The effect of winter conditions on juvenile abundance was also observed across state and federal survey index trends. A lack of correlation observed among surveys in the fall paired with a strong correlation in the spring identifies the winter period as a factor determining year-class strength of new recruits to the population. A rank order analysis of spring indices identified three of the largest year classes occurring during years with reduced shelf water volumes, warmer winter shelf waters, and a 34 PSU isohaline aligned farther inshore. While greater catches of black sea bass in the northwest Atlantic Ocean remain south of Hudson Canyon, the species' range has expanded north in recent years.

  18. Aromatase activity after a short-course of letrozole administration in adult men at sea level and at high altitude (with or without excessive erythrocytosis).

    PubMed

    Gonzales, G F; Tapia, V; Gasco, M; Gonzales-Castañeda, C

    2012-02-01

    Men living at high altitudes in Peru compared to sea level counterparts have erythrocytosis (hemoglobin 16-21 g/dl) or excessive erythrocytosis (hemoglobin>21 g/dl). High testosterone (T) levels in men at high altitude (HA) were associated with excessive erythrocytosis. High androgen levels could be due to a low aromatase activity or to an elevated rate of conversion from precursors to testosterone. The aim of this study was to evaluate aromatase activity and rate of conversion from precursors to testosterone before and after administration of the aromatase enzyme inhibitor letrozole (5 mg/day) for a 5-day period to men at HA and at sea level (SL). The response to short term aromatase inhibition was assessed in 30 adult men living at sea level, 31 native men at HA with erythrocytosis (Hb 16-21 g/dl), and 35 men at HA with excessive erythrocytosis (Hb>21 g/dl). Serum hormone levels, estradiol/testosterone, testosterone/androstenedione, and testosterone/dehydroepiandrosterone sulfate (DHEAS) ratios were measured. Men with erythrocytosis had lower basal serum T/androstenedione ratios than men with excessive erythrocytosis at HA and men at sea level. Men at HA with excessive erythrocytosis had higher T/DHEAS ratios than men with erythrocytosis and than those at sea level before and after letrozole administration. After letrozole administration, both groups of men at high altitude (with erythrocytosis or with excessive erythrocytosis) showed lower aromatase activities than those at sea level. In conclusion, higher serum testosterone levels in men with excessive erythrocytosis were associated with an increased rate of conversion from DHEAS to testosterone rather than to a lower aromatase activity.

  19. Right ear advantage for conspecific calls in adults and subadults, but not infants, California sea lions (Zalophus californianus): hemispheric specialization for communication?

    PubMed

    Böye, M; Güntürkün, O; Vauclair, J

    2005-03-01

    This paper explores functional hemispheric asymmetries in the perception of auditory signals in a marine mammal species, the sea lion. Using a head-orienting task toward sounds we found a right ear--left hemisphere--advantage for conspecific calls in adult and subadult California sea lions (Zalophus californianus) that was absent in infants. Non-conspecific sounds did not elicit lateralized reactions in any age group. These findings show that maturational steps regarding communication in the brain of pinnipeds are similar to those described in primates. Such a result in a semi-aquatic species distant from primates on the phylogenetic tree speaks for a stability and an ancient emergence of the left hemispheric specialization for vocal communication. The origin of what seems to be a widespread brain feature might be searched in the temporal and spectral communicative sound's characteristics rather than in its semantic value.

  20. A STAGE-BASED POPULATION MODEL FOR BAY SCALLOPS (ARGOPECTEN IRRADIANS) AND IMPLICATIONS FOR POPULATION-LEVEL EFFECTS OF HABITAT ATLERATION.

    EPA Science Inventory

    Bay scallops (Argopecten irradians) inhabit shallow subtidal habitats along the Atlantic coast of the United States and require settlement substrates, such as submerged aquatic vegetation (SAV), for their early juvenile stages. The short lifespan of bay scallops (1-2 yr) coupled...

  1. Characterization of three mitogen-activated protein kinases (MAPK) genes reveals involvement of ERK and JNK, not p38 in defense against bacterial infection in Yesso scallop Patinopecten yessoensis.

    PubMed

    Sun, Yan; Zhang, Lingling; Zhang, Meiwei; Li, Ruojiao; Li, Yangping; Hu, Xiaoli; Wang, Shi; Bao, Zhenmin

    2016-07-01

    Mitogen-activated protein kinases (MAPKs) are protein Ser/Thr kinases that play a vital role in innate immune responses by converting extracellular stimuli into a wide range of cellular responses. Although MAPKs have been extensively studied in various vertebrates and invertebrates, our current understanding of MAPK signaling cascade in scallop is in its infancy. In this study, three MAPK genes (PyERK, PyJNK, and Pyp38) were identified from Yesso scallop Patinopecten yessoensis. The open reading frame of PyERK, PyJNK, and Pyp38 was 1104, 1227, and 1104 bp, encoding 367, 408, and 367 amino acids, respectively. Conservation in some splicing sites was revealed across the three PyMAPKs, suggesting the common descent of MAPKs genes. The expression profiles of PyMAPKs over the course of ten different developmental stages showed that they had different expression patterns. In adult scallops, PyMAPKs were primarily expressed in muscles, hemocytes, gill, and mantle. To gain insights into their role in innate immunity, we investigated their expression profiles after infection with Gram-positive bacteria (Micrococcus luteus) and Gram-negative bacteria (Vibrio anguillarum). Significant difference in gene expression was only found in PyERK and PyJNK, but not Pyp38, suggesting Pyp38 may not participate in immune response to bacterial infection. Besides, PyERK and PyJNK exhibited more drastic change against the invasion of V. anguillarum than M. luteus, suggesting they could be more sensitive to Gram-negative bacteria than Gram-positive bacteria. This study provides valuable resource for elucidating the role of MAPK signal pathway in bivalve innate immune response.

  2. Pop-up satellite archival tag effects on the diving behaviour, growth and survival of adult Atlantic salmon Salmo salar at sea.

    PubMed

    Hedger, R D; Rikardsen, A H; Thorstad, E B

    2017-01-01

    The effects of large, externally attached pop-up satellite archival tags (PSATs) were compared with those of small implanted data storage tags (DSTs) on adult Atlantic salmon Salmo salar during their ocean migration in regards to depth utilization, diving depth, diving rate, diving speed and temperatures experienced. Additionally the return rate and growth of individuals tagged with PSATs was compared with those of small acoustic tags and DSTs. Overall, the depth distribution of individuals tagged with PSATs was similar to that of those tagged with DSTs, reflecting the pelagic nature of S. salar at sea. Individuals tagged with PSATs, however, dived less frequently and to shallower depths, and dived and surfaced at slower velocities. Sea surface temperatures experienced by individuals tagged with PSATs were similar to those experienced by those tagged with DSTs for the same time of year, suggesting that there were no large differences in the ocean migration. Return rates did not depend on whether individuals were tagged with PSATs or not, indicating that survival at sea was not impacted by PSATs in comparison to small internal tags. Individuals tagged with PSATs, however, had a smaller increase in body mass than those tagged with acoustic tags or DSTs. It was concluded that PSATs are suitable for use in researching large-scale migratory behaviour of adult S. salar at sea, but that some effects on their behaviour from tagging must be expected. Effects of PSATs may be largest in the short term when S. salar are swimming in bursts at high speeds. Even though individuals tagged with PSATs performed deep and frequent dives, the results of this study suggest that untagged individuals would perform even deeper and more frequent dives than tagged individuals.

  3. Behavioural response of adult sea lamprey (Petromyzon marinus) to predator and conspecific alarm cues: evidence of additive effects

    USGS Publications Warehouse

    Di Rocco, Richard T.; Imre, Istvan; Johnson, Nicholas; Brown, Grant B

    2016-01-01

    Sea lampreys Petromyzon marinus, an invasive pest in the Upper Great Lakes, avoid odours that represent danger in their habitat. These odours include conspecific alarm cues and predator cues, like 2-phenylethylamine hydrochloride (PEA HCl), which is found in the urine of mammalian predators. Whether conspecific alarm cues and predator cues function additively or synergistically when mixed together is unknown. The objectives of this experimental study were to determine if the avoidance response of sea lamprey to PEA HCl is proportional to the concentration delivered, and if the avoidance response to the combination of a predator cue (PEA HCl) and sea lamprey alarm cue is additive. To accomplish the first objective, groups of ten sea lampreys were placed in an artificial stream channel and presented with stepwise concentrations of PEA HCl ranging from 5 × 10−8 to 5 × 10−10 M and a deionized water control. Sea lampreys exhibited an increase in their avoidance behaviour in response to increasing concentrations of PEA HCl. To accomplish the second objective, sea lampreys were exposed to PEA HCl, conspecific alarm cue and a combination of the two. Sea lampreys responded to the combination of predator cue and conspecific alarm cue in an additive manner.

  4. Application of the biomarker responses in scallop (Chlamys farreri) to assess metals and PAHs pollution in Jiaozhou Bay, China.

    PubMed

    Liu, Na; Pan, Luqing; Wang, Jing; Yang, Huizan; Liu, Dong

    2012-09-01

    Scallops (Chlamys farreri) were collected at three sites in the Jiaozhou Bay, China in April and July 2007. The responses of biomarkers were evaluated for assessment of physiological status of scallops and pollution in the areas. Compared with site S1, the activity of aryl hydrocarbon hydroxylase was induced notably (P < 0.05) and glutathione S-transferase activity was inhibited significantly (P < 0.05) in S2 and S3. The levels of DNA alkaline unwinding, DNA protein crosslinks, protein carbonyl and lipid peroxidation were tested and indicated the oxidative stress situation of scallops. There was significant difference of biomarker levels between sampling seasons (P < 0.05), and between digestive gland and gill (P < 0.05). The results provided the reference data for multiple-pollution assessment in the marine environment and indicated that tissue type and seasons affect biomarkers, therefore these factors should be taken into consideration when biomarkers are used for environmental assessment purposes.

  5. Spatial changes in fatty acids signatures of the great scallop Pecten maximus across the Bay of Biscay continental shelf

    NASA Astrophysics Data System (ADS)

    Nerot, Caroline; Meziane, Tarik; Schaal, Gauthier; Grall, Jacques; Lorrain, Anne; Paulet, Yves-Marie; Kraffe, Edouard

    2015-10-01

    The spatial variability of food resources along continental margins can strongly influence the physiology and ecology of benthic bivalves. We explored the variability of food sources of the great scallop Pecten maximus, by determining their fatty acid (FA) composition along an inshore-offshore gradient in the Bay of Biscay (from 15 to 190 m depth). The FA composition of the digestive gland showed strong differences between shallow and deep-water habitats. This trend was mainly driven by their content in diatom-characteristic fatty acids, which are abundant near the coast. Scallops collected from the middle of the continental shelf were characterized by higher contents of flagellate markers than scallops from shallow habitats. This could be related to a permanent vertical stratification in the water column, which reduced vertical mixing of waters, thereby enhancing organic matter recycling through the microbial loop. In the deeper water station (190 m), FA compositions were close to the compositions found in scallops from shallow areas, which suggest that scallops could have access to the same resources (i.e. diatoms). Muscle FA composition was more indicative of the physiological state of scallops over this depth range, revealing contrasting reproductive strategies among the two coastal sites and metabolic or physiological adaptation at greater depth (e.g. structural and functional adjustments of membrane composition). This study therefore revealed contrasted patterns between shallow and deeper habitats for both P. maximus muscle and digestive gland tissues. This emphasizes the variability in the diet of this species along its distribution range, and stresses the importance of analyzing different tissues for their FA composition in order to better understand their physiology and ecology.

  6. Biomineralization changes with food supply confer juvenile scallops (Argopecten purpuratus) resistance to ocean acidification.

    PubMed

    Ramajo, Laura; Marbà, Núria; Prado, Luis; Peron, Sophie; Lardies, Marco A; Rodriguez-Navarro, Alejandro B; Vargas, Cristian A; Lagos, Nelson A; Duarte, Carlos M

    2016-06-01

    Future ocean acidification (OA) will affect physiological traits of marine species, with calcifying species being particularly vulnerable. As OA entails high energy demands, particularly during the rapid juvenile growth phase, food supply may play a key role in the response of marine organisms to OA. We experimentally evaluated the role of food supply in modulating physiological responses and biomineralization processes in juveniles of the Chilean scallop, Argopecten purpuratus, that were exposed to control (pH ~ 8.0) and low pH (pH ~ 7.6) conditions using three food supply treatments (high, intermediate, and low). We found that pH and food levels had additive effects on the physiological response of the juvenile scallops. Metabolic rates, shell growth, net calcification, and ingestion rates increased significantly at low pH conditions, independent of food. These physiological responses increased significantly in organisms exposed to intermediate and high levels of food supply. Hence, food supply seems to play a major role modulating organismal response by providing the energetic means to bolster the physiological response of OA stress. On the contrary, the relative expression of chitin synthase, a functional molecule for biomineralization, increased significantly in scallops exposed to low food supply and low pH, which resulted in a thicker periostracum enriched with chitin polysaccharides. Under reduced food and low pH conditions, the adaptive organismal response was to trade-off growth for the expression of biomineralization molecules and altering of the organic composition of shell periostracum, suggesting that the future performance of these calcifiers will depend on the trajectories of both OA and food supply. Thus, incorporating a suite of traits and multiple stressors in future studies of the adaptive organismal response may provide key insights on OA impacts on marine calcifiers.

  7. Purification and Identification of Antioxidant Peptides from Protein Hydrolysate of Scalloped Hammerhead (Sphyrna lewini) Cartilage

    PubMed Central

    Li, Xue-Rong; Chi, Chang-Feng; Li, Li; Wang, Bin

    2017-01-01

    The aim of this study was to purify and identify peptides with antioxidant properties from protein hydrolysate of scalloped hammerhead (Sphyrna lewini) cartilage. Cartilaginous proteins of the scalloped hammerhead were extracted by guanidine hydrochloride, and three antioxidant peptides, named enzymolysis peptide of scalloped hammerhead cartilage A (SCPE-A), SCPE-B and SCPE-C, were subsequently isolated from the hydrolysate of the cartilaginous proteins using ultrafiltration and chromatography. The amino acid sequences of SCPE-A, SCPE-B and SCPE-C were identified as Gly-Pro-Glu (GPE), Gly-Ala-Arg-Gly-Pro-Gln (GARGPQ), and Gly-Phe-Thr-Gly-Pro-Pro-Gly-Phe-Asn-Gly (GFTGPPGFNG), with molecular weights of 301.30 Da, 584.64 Da and 950.03 Da, respectively. As per in vitro activity testing, SCPE-A, SCPE-B and SCPE-C exhibited strong scavenging activities on 2,2-diphenyl-1-picrylhydrazyl radicals (DPPH•) (half elimination ratio (EC50) 2.43, 2.66 and 1.99 mg/mL), hydroxyl radicals (HO•) (EC50 0.28, 0.21 and 0.15 mg/mL), 2,2′-azino-bis-3-ethylbenzothiazoline-6-sulfonic acid radicals (ABTS+•) (EC50 0.24, 0.18 and 0.29 mg/mL), and superoxide anion radicals (O2−•) (EC50 0.10, 0.14 and 0.11 mg/mL). In addition, SCPE-A showed inhibition activity similar to butylated hydroxytoluene (BHT) in lipid peroxidation in a linoleic acid model system. The amino acid residues of Gly, Pro and Phe could positively influence the antioxidant activities of GPE, GARGPQ and GFTGPPGFNG. These results suggested that GPE, GARGPQ and GFTGPPGFNG might serve as potential antioxidants and be used as food additives and functional foods. PMID:28257057

  8. Balancing the edge effects budget: bay scallop settlement and loss along a seagrass edge.

    PubMed

    Carroll, John M; Furman, Bradley T; Tettelbach, Stephen T; Peterson, Bradley J

    2012-07-01

    Edge effects are a dominant subject in landscape ecology literature, yet they are highly variable and poorly understood. Often, the literature suggests simple models for edge effects-positive (enhancement at the edge), negative (enhancement at the interior), or no effect (neutral)--on a variety of metrics, including abundance, diversity, and mortality. In the marine realm, much of this work has focused on fragmented seagrass habitats due to their importance for a variety of commercially important species. In this study, the settlement, recruitment, and survival of bay scallops was investigated across a variety of seagrass patch treatments. By simultaneously collecting settlers (those viable larvae available to settle and metamorphose) and recruits (those settlers that survive some period of time, in this case, 6 weeks) on the same collectors, we were able to demonstrate a "balance" between positive and negative edge effects, resulting in a net neutral effect. Scallop settlement was significantly enhanced along seagrass edges, regardless of patch type while survival was elevated within patch interiors. However, recruitment (the net result of settlement and post-settlement loss) did not vary significantly from edge to center, representing a neutral effect. Further, results suggest that post-settlement loss, most likely due to predation, appears to be the dominant mechanism structuring scallop abundance, not patterns in settlement. These data illustrate the complexity of edge effects, and suggest that the metric used to investigate the effect (be it abundance, survival, or other metrics) can often influence the magnitude and direction of the perceived effect. Traditionally, high predation along a habitat edge would have indicated an "ecological trap" for the species in question; however, this study demonstrates that, at the population level, an ecological trap may not exist.

  9. A novel multi-domain C1qDC protein from Zhikong scallop Chlamys farreri provides new insights into the function of invertebrate C1qDC proteins.

    PubMed

    Wang, Leilei; Wang, Lingling; Zhang, Daoxiang; Jiang, Qiufen; Sun, Rui; Wang, Hao; Zhang, Huan; Song, Linsheng

    2015-10-01

    The C1q domain containing (C1qDC) proteins are a family of proteins possessing globular C1q (gC1q) domains, and they rely on this domain to recognize various ligands such as PAMPs, immunoglobulins, ligands on apoptotic cell. In the present study, a novel multi-domain C1qDC protein (CfC1qDC-2) was identified from scallop Chlamys farreri, and its full length cDNA was composed of 1648 bp, encoding a signal peptide and three typical gC1q domains. BLAST analysis revealed significant sequence similarity between CfC1qDC-2 and C1qDC proteins from mollusks. Three gC1q domains were predicted in its tertiary structure to form a tightly packed bell-shaped trimer, and each one adopted a typical 10-stranded sandwich fold with a jelly-roll topology and contained six aromatic amino acids forming the hydrophobic core. The mRNA transcripts of CfC1qDC-2 were mainly detected in the tissues of hepatopancreas and gonad of adult scallops, and the expression level was up-regulated in hemocytes after stimulated by LPS, PGN and β-glucan. During the embryonic development of scallop, the mRNA transcripts of CfC1qDC-2 were presented in all the detected stages, and the expression level was up-regulated from D-hinged larvae and reached the highest at eye-spot larvae. The recombinant protein of MBP-CfC1qDC-2 (rCfC1qDC-2) could bind various PAMPs including LPS, PGN, LTA, β-glucan, mannan as well as polyI:C, and different microorganisms including three Gram-negative bacteria, three Gram-positive bacteria and two yeasts, as well as scallop apoptotic cells. Meanwhile, rCfC1qDC-2 could interact with human heat-aggregated IgG and IgM, and inhibit the C1q-dependent hemolysis of rabbit serum. All these results indicated that CfC1qDC-2 could recognize not only PAMPs as a PRR, but also the apoptotic cells. Moreover, the similar structures and functions shared by CfC1qDC-2 and complement C1q provided a new insight into the evolution of C1qDC proteins in complement system.

  10. Effect of fouling organisms on food uptake and nutrient release of scallop ( Chlamys nobilis, Reeve) cultured in Daya Bay

    NASA Astrophysics Data System (ADS)

    Su, Zhenxia; Xiao, Hui; Yan, Yan; Huang, Liangmin

    2008-02-01

    Biofouling is an important factor that affects the bivalve farming industry. Fouling organisms may reduce growth and survival rate of the cultured species. Fouler are often filter feeders, so they are potential competitors for food resource with the cultured species. The present study was conducted to measure the impact of fouling on food uptake and nutrient release in April and June, 2006 in Daya Bay near Guangzhou, China. Results showed that fouling organisms had significant effect on food uptake and nutrient release. The chlorophyll a uptake rate of fouled scallops was 7.53Lh-1±1.416Lh-1 and 11.94Lh-1±2.497Lh-1 in April and June, respectively, significantly higher than those of cleaned scallops, i.e., 4.23Lh-1±2.744Lh-1 and 2.57Lh-1±1.832Lh-1 respectively. The consumption of total particulate matter by fouled scallops in April and June was 5.52Lh-1±0.818Lh-1 and 3.07Lh-1±0.971Lh-1, respectively; the corresponding results for cleaned scallops are 2.49Lh-1±0.614Lh-1 and 2.37±1.214Lh-1, respectively. Fouling increased ammonia release significantly. The ammonia release rate of fouled scallops was 33.81Lh-1±7.699Lh-1 and 76.39Lh-1±9.251Lh-1 in April and June, while cleaned scallops released 2.46Lh-1±0.511Lh-1 and 7.23Lh-1±1.026Lh-1 ammonia, respectively. Phosphate release of fouled scallops was 22.72Lh-1±9.978Lh-1 in June and cleaned scallops released phosphate 6.01Lh-1±0.876Lh-1 in April. Therefore, fouling contributed much to food reduction and concentration increase of ammonia and phosphate in water.

  11. Accumulation, Biotransformation, Histopathology and Paralysis in the Pacific Calico Scallop Argopecten ventricosus by the Paralyzing Toxins of the Dinoflagellate Gymnodinium catenatum

    PubMed Central

    Escobedo-Lozano, Amada Y.; Estrada, Norma; Ascencio, Felipe; Contreras, Gerardo; Alonso-Rodriguez, Rosalba

    2012-01-01

    The dinoflagellate Gymnodinium catenatum produces paralyzing shellfish poisons that are consumed and accumulated by bivalves. We performed short-term feeding experiments to examine ingestion, accumulation, biotransformation, histopathology, and paralysis in the juvenile Pacific calico scallop Argopecten ventricosus that consume this dinoflagellate. Depletion of algal cells was measured in closed systems. Histopathological preparations were microscopically analyzed. Paralysis was observed and the time of recovery recorded. Accumulation and possible biotransformation of toxins were measured by HPLC analysis. Feeding activity in treated scallops showed that scallops produced pseudofeces, ingestion rates decreased at 8 h; approximately 60% of the scallops were paralyzed and melanin production and hemocyte aggregation were observed in several tissues at 15 h. HPLC analysis showed that the only toxins present in the dinoflagellates and scallops were the N-sulfo-carbamoyl toxins (C1, C2); after hydrolysis, the carbamate toxins (epimers GTX2/3) were present. C1 and C2 toxins were most common in the mantle, followed by the digestive gland and stomach-complex, adductor muscle, kidney and rectum group, and finally, gills. Toxin profiles in scallop tissue were similar to the dinoflagellate; biotransformations were not present in the scallops in this short-term feeding experiment. PMID:22822356

  12. Variation in Size and Growth of the Great Scallop Pecten maximus along a Latitudinal Gradient

    PubMed Central

    Chauvaud, Laurent; Patry, Yann; Jolivet, Aurélie; Cam, Emmanuelle; Le Goff, Clement; Strand, Øivind; Charrier, Grégory; Thébault, Julien; Lazure, Pascal; Gotthard, Karl; Clavier, Jacques

    2012-01-01

    Understanding the relationship between growth and temperature will aid in the evaluation of thermal stress and threats to ectotherms in the context of anticipated climate changes. Most Pecten maximus scallops living at high latitudes in the northern hemisphere have a larger maximum body size than individuals further south, a common pattern among many ectotherms. We investigated differences in daily shell growth among scallop populations along the Northeast Atlantic coast from Spain to Norway. This study design allowed us to address precisely whether the asymptotic size observed along a latitudinal gradient, mainly defined by a temperature gradient, results from differences in annual or daily growth rates, or a difference in the length of the growing season. We found that low annual growth rates in northern populations are not due to low daily growth values, but to the smaller number of days available each year to achieve growth compared to the south. We documented a decrease in the annual number of growth days with age regardless of latitude. However, despite initially lower annual growth performances in terms of growing season length and growth rate, differences in asymptotic size as a function of latitude resulted from persistent annual growth performances in the north and sharp declines in the south. Our measurements of daily growth rates throughout life in a long-lived ectothermic species provide new insight into spatio-temporal variations in growth dynamics and growing season length that cannot be accounted for by classical growth models that only address asymptotic size and annual growth rate. PMID:22649553

  13. The transcriptomic response to copper exposure in the digestive gland of Japanese scallops (Mizuhopecten yessoensis).

    PubMed

    Meng, Xiaolin; Tian, Xue; Nie, Guoxing; Wang, Junli; Liu, Mei; Jiang, Keyong; Wang, Baojie; Guo, Qianqian; Huang, Jianrong; Wang, Lei

    2015-10-01

    The present study was conducted to elucidate the effects of copper exposure on the immune system and lipid metabolism of the Japanese scallop, Mizuhopecten yessoensis. Transcriptional levels of differentially expressed genes (DEGs)in M. yessoensis digestive gland tissue were analyzed using the deep-sequencing platform Illumina HiSeq™ 2000. In total, 841 and 877 genes were identified as significantly up- or down-regulated, respectively. In addition, significant enrichment analysis identified 3 gene ontology terms and 15 pathways involved in the response to copper exposure. Analysis of transcripts related to the immune response revealed a complex pattern of innate recognition receptors, including toll-like receptors, NOD-like receptors and downstream pathway effectors, including those involved in apoptosis. Furthermore, genomic analysis revealed that genes involved in extracellular matrix (ECM)-receptor interactions were enriched in Cu-exposed scallop glands. These results will provide a resource for subsequent gene expression studies regarding heavy metal exposure and the identification of copper-sensitive biomarkers for the aquaculture of M. yessoensis.

  14. Nitrogen stable isotopes reveal age-dependent dietary shift in the Japanese scallop Mizuhopecten yessoensis.

    PubMed

    Aya, Frolan A; Kudo, Isao

    2017-03-01

    Ontogenetic niche shifts in diet are a consequence of changes in body size or resource partitioning between age classes. To better resolve the feeding patterns of the Japanese scallop Mizuhopecten yessoensis, we examined the relative importance of age and size in the diet of this species using stable isotope ratios of carbon (δ(13)C) and nitrogen (δ(15)N) from 2006 to 2009. Contribution of food sources was quantified using an isotope mixing model by comparing the muscle tissue isotope ratios to those of suspended particulate organic matter (SPOM) and their zooplankton prey (e.g. micro- and meso-zooplankton). Unlike the δ(13)C values, which remained constant with age and size, muscle δ(15)N values were more positively correlated with age accounting for 69 % of variations than size with only 46 %. Increasing (15)N values with age suggested that shifts in diet from SPOM to micro- and meso-zooplankton occurred during ontogeny in M. yessoensis. Results of the isotope mixing model indicated that SPOM contribution to scallop's diet decreased from 68 to 8 % while those of zooplankton increased from 15 to 50 % with increasing age. This study concludes that age-related dietary shift explains the enrichment of (15)N, as a result of predation on zooplankton by M. yessoensis.

  15. Development of 101 novel EST-derived single nucleotide polymorphism markers for Zhikong scallop ( Chlamys farreri)

    NASA Astrophysics Data System (ADS)

    Li, Jiqin; Bao, Zhenmin; Li, Ling; Wang, Xiaojian; Wang, Shi; Hu, Xiaoli

    2013-09-01

    Zhikong scallop ( Chlamys farreri) is an important maricultured species in China. Many researches on this species, such as population genetics and QTL fine-mapping, need a large number of molecular markers. In this study, based on the expressed sequence tags (EST), a total of 300 putative single nucleotide polymorphisms (SNPs) were selected and validated using high resolution melting (HRM) technology with unlabeled probe. Of them, 101 (33.7%) were found to be polymorphic in 48 individuals from 4 populations. Further evaluation with 48 individuals from Qingdao population showed that all the polymorphic loci had two alleles with the minor allele frequency ranged from 0.046 to 0.500. The observed and expected heterozygosities ranged from 0.000 to 0.925 and from 0.089 to 0.505, respectively. Fifteen loci deviated significantly from Hardy-Weinberg equilibrium and significant linkage disequilibrate was detected in one pair of markers. BLASTx gave significant hits for 72 of the 101 polymorphic SNP-containing ESTs. Thirty four polymorphic SNP loci were predicted to be non-synonymous substitutions as they caused either the change of codons (33 SNPs) or pretermination of translation (1 SNP). The markers developed can be used for the population studies and genetic improvement on Zhikong scallop.

  16. Effects of benzo(a)pyrene exposure on the antioxidant enzyme activity of scallop Chlamys farreri

    NASA Astrophysics Data System (ADS)

    Pan, Luqing; Ren, Jiayun; Zheng, Debin

    2009-02-01

    Scallop Chlamys farreri was exposed to different concentrations of benzo(a)pyrene (BaP) (0.5 μg/L, 1.0 μg/L, 10.0 μg/L and 50.0 μg/L) for 30 days in seawater. The 7-ethoxyresorufin O-deethylase (EROD) activity was significantly induced, and increased with the increasing BaP concentration. The glutathione-S-transferase (GST), superoxide dismutase (SOD), catalase (CAT), Glutathione peroxidase (GPx) activities increased in short time at low concentration of BaP, and was significantly depressed at high concentrations. Scallop gill was more sensitive to BaP than the digestive gland, and the digestive gland was the main tissue to deal with oxyradicals. The contents of malondialdehyde (MDA) increased with the exposure time and there was a positive correlation (concentration-effect) between the MDA content and the concentration of BaP. The biomarkers determined in this experiment had important roles in detoxification, and showed great potential as biomarkers for oxidative stress. Controlled laboratory experiments designed to simulate field exposure scenarios are particularly useful in ascertaining biomarkers suitable for use with complex contaminant mixtures in the marine environment.

  17. The broad pattern recognition spectrum of the Toll-like receptor in mollusk Zhikong scallop Chlamys farreri.

    PubMed

    Wang, Mengqiang; Wang, Lingling; Guo, Ying; Sun, Rui; Yue, Feng; Yi, Qilin; Song, Linsheng

    2015-10-01

    Toll-like receptors (TLRs) are among the most studied pattern recognition receptors (PRRs) playing essential roles in innate immune defenses. In the present study, the basic features of CfTLR in mollusk Zhikong scallop Chlamys farreri, including sequence homology, tissue distribution, subcellular localization and ligands spectrum, were investigated to elucidate its pattern recognition. The elements of extracellular domains (ECD) in CfTLR displayed high homology to the corresponding parts of the ECDs in TLRs from Homo sapiens. CfTLR protein was detected in hemocytes, mantle, gills, hepatopancreas, kidney and gonad of the scallops, and it was localized in both the plasma membranes and the lysosomes in HEK293T cells. CfTLR could activate NFκB in response to multiple HsTLR ligands including Pam3CSK4, glucan (GLU), peptidoglycan (PGN), polyriboinosinic:polyribocytidylic acid (poly I:C), Imiquimod and three types of CpG. Additionally, the scallop serum could enhance the induction of NFκB in the CfTLR expressing cells elicited by most PAMPs, including GLU, PGN, Imiquimod and four types of CpG. It could be concluded that this primitive mollusk TLR shared a hybrid function in pattern recognition and could recognize broader ligands than mammalian TLRs, and its mosaic capability of pathogen associated molecular pattern (PAMP) recognition might be based on the basic features of its structure, ligand properties and the assistance of some components in scallop serum.

  18. Complete Genome Sequence of Arcobacter sp. Strain LFT 1.7 Isolated from Great Scallop (Pecten maximus) Larvae.

    PubMed

    Diéguez, A L; Romalde, J L

    2017-02-09

    Arcobacter sp. strain LFT 1.7 was isolated from great scallop (Pecten maximus) larvae. Analysis of the 16S rRNA gene sequence showed that strain LFT 1.7 formed an independent lineage in the genus Arcobacter The draft genome of LFT 1.7 was sequenced to determine the taxonomic position and ecological function of this strain.

  19. Complete Genome Sequence of Arcobacter sp. Strain LFT 1.7 Isolated from Great Scallop (Pecten maximus) Larvae

    PubMed Central

    Diéguez, A. L.

    2017-01-01

    ABSTRACT Arcobacter sp. strain LFT 1.7 was isolated from great scallop (Pecten maximus) larvae. Analysis of the 16S rRNA gene sequence showed that strain LFT 1.7 formed an independent lineage in the genus Arcobacter. The draft genome of LFT 1.7 was sequenced to determine the taxonomic position and ecological function of this strain. PMID:28183771

  20. 76 FR 72891 - Endangered and Threatened Wildlife; 90-Day Finding on a Petition To List the Scalloped Hammerhead...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-11-28

    ... WildEarth Guardians and Friends of Animals to list the scalloped hammerhead shark (Sphyrna lewini) as..., or DPS is ``endangered'' if it is in danger of extinction throughout all or a significant portion of... species. During our status review, we will first determine whether the species is in danger of...

  1. DNA damage in the gill cells of the marine scallop Mizuhopecten yessoensis during anoxic stress and aerobic recovery

    NASA Astrophysics Data System (ADS)

    Slobodskova, Valentina V.; Zhukovskaya, Avianna F.; Chelomin, Victor P.

    2012-06-01

    Anoxia-induced DNA damage in the gill cells of the marine scallop Mizuhopecten yessoensis was assessed with the alkaline comet assay (single-cell gel electrophoresis). The alkaline comet assay method for detecting DNA strand breaks and alkali labile sites in individual cells. DNA damage was determened in the scallops ( M. yessoensis) gill cells. The scallops were exposed to air for 8 h showing a clear increase in the levels of DNA damage. After the air exposure, M. yessoensis were re-submersed for a period of 12 h, leading values to return to a pre-aerial exposure level. Control animals were kept immersed during the whole period. The resulting data demonstrate that natural influences, such as oxygen depletion (anoxia) in seawater, can be responsible for the induction of DNA damage. If the scallops were re-immersed in oxic conditions, the anoxically induced breaks were repaired. The main mechanisms influencing the integrity of the DNA structure are discussed in this paper.

  2. Toxic effects upon exposure to polycyclic aromatic hydrocarbon (chrysene) in scallop Chlamys farreri during the reproduction period.

    PubMed

    Xiu, Meng; Pan, Luqing; Jin, Qian

    2016-06-01

    This study aims to investigate potential toxic effects of chrysene (CHR) on mature scallop Chlamys farreri during the reproduction period, using indicators of antioxidant defences and oxidative stress. Scallops were exposed to 0.2, 0.8 and 3.2μg/L waterborne CHR for 21 days, at day 10 scallops were induced to spawn. At days 1, 3, 6, 10, 11, 15 and 21, aryl hydrocarbon hydroxylase (AHH), 7-ethoxyresorufin-O-deethylase (EROD), glutathione-s-transferase (GST), glutathione (GSH), superoxide dismutase (SOD), lipid peroxidation (LPO), protein carbonyl (PC) and DNA strand breaks in digestive glands were examined by separately analysing male and female scallops. During the pre-spawn period, Levels of enzymatic activities and oxidative stress were all induced by the exposure to CHR for females and males. GST activity presented a good time- and dose-dependent relationship only in males, and GSH content showed a dose-dependent manner in both sexes. During the post-spawn period, different trends were observed, while PC contents maintained growth in time- and dose-dependent manner. Overall, males were more sensitive than females to CHR exposure in enzyme activities, and correspondingly, females suffered from more serious oxidative damages. Both GSH and PC contents seemed to be potential biomarkers for PAH exposure. These results will offer the information on toxicity of CHR in this species, and ensure the influence of gender and reproductive status on PAH detoxification metabolism.

  3. Importance of kelp-derived organic carbon to the scallop Chlamys farreri in an integrated multi-trophic aquaculture system

    NASA Astrophysics Data System (ADS)

    Xu, Qiang; Gao, Fei; Yang, Hongsheng

    2016-03-01

    Bivalves and seaweeds are important cleaners that are widely used in integrated multi-trophic aquaculture (IMTA) systems. A beneficial relationship between seaweed and bivalve in the seaweed-based IMTA system has been confirmed, but the trophic importance of seaweed-derived particulate organic materials to the co-cultured bivalve is still unclear. We evaluated the trophic importance of the kelp Saccharina japonica to the co-cultured scallop Chlamys farreri in a typical IMTA farm in Sungo Bay (Weihai, North China). The dynamics of detritus carbon in the water were monitored during the culturing period. The proportion of kelp-derived organic matter in the diet of the co-cultured scallop was assessed via the stable carbon isotope method. Results showed that the detritus carbon in the water ranged from 75.52 to 265.19 μg/L, which was 25.6% to 73.8% of total particulate organic carbon (TPOC) during the study period. The amount of detritus carbon and its proportion in the TPOC changed throughout the culture cycle of the kelp. Stable carbon isotope analysis showed that the cultured scallop obtained 14.1% to 42.8% of its tissue carbon from the kelp, and that the percentages were closely correlated with the proportion of detritus carbon in the water ( F =0.993, P= 0.003). Evaluation showed that for 17 000 tons (wet weight) of annual scallop production, the kelp contributed about 139.3 tons of carbon (535.8 tons of dry mass). This confirms that cultured kelp plays a similar trophic role in IMTA systems as it does in a natural kelp bed. It is a major contributor to the detritus pool and supplies a vital food source to filter-feeding scallops in the IMTA system, especially during winter and early spring when phytoplankton are scarce.

  4. Characterization of bacterial communities associating with larval development of Yesso Scallop ( Patinopecten yessoensisis Jay, 1857) by high-throughput sequencing

    NASA Astrophysics Data System (ADS)

    Sun, Xueying; Liu, Jichen; Li, Ming; Zhao, Xuewei; Liang, Jun; Sun, Pihai; Ma, Yuexin

    2016-12-01

    Bacterial community presumably plays an essential role in inhibiting pathogen colonization and maintaining the health of scallop larvae, but limiting data are available for Yesso scallop ( Patinopecten yessoensisis Jay, 1857) larval development stages. The aim of this study was to characterize and compare the bacterial communities associating with Yesso scallop larval development at fertilized egg S1, trochophora S2, D-shaped larvae S3, umbo larvae S4, and juvenile scallop S5 stages by Illumina high-throughput sequencing. Genomic DNA was extracted from the larvae and their associating bactera, and a gene segment covering V3-V4 region of 16S rRNA gene was amplified and sequenced using an Illumina Miseq sequencer. Overall, 106760 qualified sequences with an average length of 449 bp were obtained. Sequences were compared with those retrieved from 16S rRNA gene databases, and 4 phyla, 7 classes, 15 orders, 21 families, 31 genera were identified. Proteobacteria was predominant phylum, accounting for more than 99%, at all 5 larval development stages. At genus level, Pseudomonas was dominant at stages S1 (80.60%), S2 (87.77%) and S5 (68.71%), followed by Photobacterium (17.06%) and Aeromonas (1.64%) at stage S1, Serratia (6.94%), Stenotrophomonas (3.08%) and Acinetobacter (1.2%) at stage S2, Shewanella (25.95%) and Pseudoalteromonas (4.57%) at stage S5. Moreover, genus Pseudoalteromonas became dominant at stages S3 (44.85%) and S4 (56.02%), followed by Photobacterium (29.82%), Pseudomonas (11.86%), Aliivibrio (8.60%) and Shewanella (3.39%) at stage S3, Pseudomonas (18.16%), Aliivibrio (14.29%), Shewanella (4.11%), Psychromonas (4.04%) and Psychrobacter (1.81%) at stage S4. From the results, we concluded that the bacterial community changed significantly at different development stages of Yesso Scallop larvae.

  5. Anatomical mercury speciation in bay scallops by thio-bearing chelating resin concentration and GC-electron capture detector determination.

    PubMed

    Zhang, Qihua; Yang, Guipeng

    2014-01-01

    The highly toxic methyl-, ethyl- and phenylmercury species that may exist in the three main anatomical parts - the adductor muscle, the mantle and the visceral mass - of bay scallops (Argopecten irradias) were quantitatively released by cupric chloride, zinc acetate, sodium chloride and hydrochloric acid (HCl) under ultrasonic extraction. After centrifugation, the mercury species in the supernatant were concentrated by thio (SH)-bearing chelating resins, eluted with HClO4 and HCl and extracted with toluene. Separation was achieved by capillary GC equipped with programmed temperatures, a constant nitrogen flow and detected by a micro-electron capture detector (μECD). Under optimised conditions, the LODs for methyl-, ethyl- and phenylmercury in bay scallop samples were 1.1, 0.65 and 0.80 ng g(-1), respectively. The maximum RSD for three replicate determinations of methyl-, ethyl- and phenylmercury in bay scallop samples were 13.7%, 14.0% and 11.2%, respectively. In the concentration range of 4-200 ng g(-1) in bay scallop samples, the calibration graphs were linear with correlation coefficients not less than 0.997. Recoveries for spiked samples were in the range of 92.7-103.5% (methylmercury), 87.5-108.3% (ethylmercury) and 91.6-106.0% (phenylmercury), respectively. The method was verified by the determination of methylmercury in a CRM GBW10029 (Total Mercury and Methyl Mercury in Fish Tissue), with results in good agreement with the certified values. Methylmercury - the only existing species in bay scallops - was successfully determined by the method.

  6. Liquid chromatography post-column oxidation (PCOX) method for the determination of paralytic shellfish toxins in mussels, clams, oysters, and scallops: collaborative study.

    PubMed

    van de Riet, Jeffrey; Gibbs, Ryan S; Muggah, Patricia M; Rourke, Wade A; MacNeil, James D; Quilliam, Michael A

    2011-01-01

    Sixteen laboratories participated in a collaborative study to evaluate method performance parameters of a liquid chromatographic method of analysis for paralytic shellfish toxins (PST) in blue mussels (Mytilus edulis), soft shell clams (Mya arenaria), sea scallops (Placopectin magellanicus), and American oysters (Crassostrea virginicus). The specific analogs tested included saxitoxin, neosaxitoxin, gonyautoxins-1 to -5, decarbamoyl-gonyautoxins-2 and -3, decarbamoyl-saxitoxin, and N-sulfocarbamoyl-gonyautoxin-2 and -3. This instrumental technique has been developed as a replacement for the current AOAC biological method (AOAC Official Method 959.08) and an alternative to the pre-column oxidation LC method (AOAC Official Method 2005.06). The method is based on reversed-phase liquid chromatography with post-column oxidation and fluorescence detection (excitation 330 nm and emission 390 nm). The shellfish samples used in the study were prepared from the edible tissues of clams, mussels, oysters, and scallops to contain concentrations of PST representative of low, medium, and high toxicities and with varying profiles of individual toxins. These concentrations are approximately equivalent to 1/2 maximum level (ML), ML, or 2xML established by regulatory authorities (0.40, 0.80, and 1.60 mg STX diHCl eq/kg, respectively). Recovery for the individual toxins ranged from 104 to 127%, and recovery of total toxin averaged 116%. Horwitz Ratio (HorRat) values for individual toxins in the materials included in the study were generally within the desired range of 0.3 to 2.0. For the estimation of total toxicity in the test materials, the reproducibility relative standard deviation ranged from 4.6 to 20%. A bridging study comparing the results from the study participants using the post-column oxidation (PCOX) method with the results obtained in the study director's laboratory on the same test materials using the accepted reference method, the mouse bioassay (MBA; AOAC Official

  7. Molecular characterization and immune response expression of the QM gene from the scallop Chlamys farreri.

    PubMed

    Chen, Guofu; Zhang, Chunyun; Wang, Yue; Wang, Yuanyuan; Guo, Changlu; Wang, Chongming

    2015-08-01

    The scallop Chlamys farreri is an important aquaculture species in northern China. However, the sustainable development of the scallop industry is currently threatened by several pathogens that cause mass mortality of this mollusk. Therefore, a complete understanding of the immune response mechanisms involved in host-virus interactions is necessary. This study reports a novel QM gene from C. farreri. This gene was first identified as a putative tumor suppressor gene from human and then confirmed to participate in several functions, including immune response. The QM gene from C. farreri (CfQM) was identified by suppression subtractive hybridization, and its full-length (763 bp) cDNA was obtained through rapid amplification of cDNA ends. The cDNA of CfQM contained a short 5'-UTR of 22 bp and a 3'-UTR of 84 bp. Its ORF comprised 657 nucleotides that encode 218 amino acids with a molecular weight of approximately 28.3 kDa and an isoelectric point of 10.06. The deduced amino acid sequence of CfQM contained a series of conserved functional motifs that belong to the QM family. Phylogenetic analysis revealed that CfQM was closely related to other mollusk QM proteins, and altogether they form a mollusk QM protein subfamily that displays evolutionary conservation from yeast to human. The tissue-specific expression and transcriptional regulation of CfQM were investigated by quantitative real-time PCR in response to bacterial (Vibrio anguillarum) and viral (acute viral necrobiotic virus) challenges. The transcript level of CfQM was high in all of the examined tissues in a constitutive manner. The highest and lowest expression levels of CfQM were measured in the hepatopancreas and hemocyte, respectively. Upon bacterial and viral challenges, the relative mRNA expression of CfQM sharply increased at 6 h post-infection (hpi) and then normalized at 48 hpi. These findings suggest that CfQM can respond to and protect against pathogen challenge. To the best of our knowledge, this

  8. Scalloping Sacral Arachnoid Cyst as a Cause of Perianal Pain- A Case Report

    PubMed Central

    Tyagi, Himanshu Ravindra; Kalra, Kashmiri Lal; Acharya, Shankar; Singh, Rupinder Pal

    2014-01-01

    Introduction: Scalloping sacral arachnoid cyst though a rare condition, should be suspected in cases of persistent perianal pain without any obvious urological or anorectal pathology. Such difficult cases justify ordering an M.R.I of spine as plain X-Rays and clinical examination may come out to be inconclusive. X-ray in later stages may show changes corresponding to scalloping of bone due pressure effect of cyst on surrounding tissue. Diagnosis may further be confirmed by doing contrast MRI which differentiates arachnoid cyst from other intradural and extradural pathologies. Though anatomically spinal arachnoid cysts are just an out pouching from the spinal meningeal sac or nerve root sheath they may be extradural or intradural in their location, communicating to main C.S.F column through their pedicle or an ostium leading to continuous enlargement in size. Case Report: A 32 year old female was admitted under our spine unit with 1.5 year history of chronic pain, swelling and reduced sensation in perianal region. On examination she had tenderness and hypoesthesia over lower sacral region. The pain was continuous, dull aching in nature, not related to activity, localized over lower sacrum and perianal area. The neurological examination of her both lower limbs were unremarkable. Anal tone and anal reflex were normal. No sign of inflammation or tenderness was found over coccyx. Since the X-rays were inconclusive an MRI scan was done which showed a cystic lesion in the sacral area extending from S2 to S4 region with mechanical scalloping effect on the surrounding bone. The lesion had same intensity as C.S.F in both T1 &T2 weighted images. The treatment was done by way of surgical decompression with complete excision of cyst and obliteration of space by a posterior midline approach. Presently the patient is 1 year post operative and no sign of recurrence is there. Conclusion: Sacral arachnoid cysts should be considered as a differential diagnosis of perianal pain. Large

  9. Haemato-biochemical disorders associated with nodavirus like-agent in adult leaping mullet Liza saliens (Risso, 1810) in the Caspian Sea.

    PubMed

    Ghiasi, Maryam; Binaii, Mohammad; Ghasemi, Mohdes; Fazli, Hasan; Zorriehzahra, Mohamad Jalil

    2016-03-01

    Betanoda virus is an emerging problem in several marine fish species in various geographic areas all over the world. In recent years, mullets stock of the Caspian Sea decreased dramatically and a betanoda virus like-agent was introduced as the cause of mullet's mortality. The main objective of the present study is to compare hemato-biochemical parameters in healthy and infected sharpnose mullets (Liza saliens) to betanoda virus like-agent. The adult sharpnose mullets (34 clinically affected fish + 34 apparently healthy fish) were captured from the southeast the Caspian Sea from 2012 to 2013. All of the captured fish were 4 or 5 years old. The main clinical sings of infected fish were lethargy, severe abdominal distention, abnormal swimming and hyperinflation of swim bladder. The results showed that the weight and total length of infected fish were significantly lower than the healthy fish. The results of histopatological evaluation and indirect florescent antibody test were confirmed the presence of a betanoda virus-like agent in infected fish. The diseased fish were severely anemic (hypochromic macrocytic anemia) and had a serious haemopoietic disorders. The anemia associated with a sever leukopenia, a significant rise of neutrophils and immature neutrophils and a significant decries of lymphocytes percentage. Total protein, albumin and total immunoglobulin levels were significantly reduced in the serum of infected fish, while the activities of aspartate aminotransferase and alanine aminotransferase significantly increased when compared to the healthy fish. These results suggested that the feeding of the infected fish to betanoda virus like-agent were disturbed and it could be cause haemato-biochemical disorder and mortality of the fish in Iranian water of the Caspian Sea.

  10. Cloning of the GABAB Receptor Subunits B1 and B2 and their Expression in the Central Nervous System of the Adult Sea Lamprey

    PubMed Central

    Romaus-Sanjurjo, Daniel; Fernández-López, Blanca; Sobrido-Cameán, Daniel; Barreiro-Iglesias, Antón; Rodicio, María Celina

    2016-01-01

    In vertebrates, γ-aminobutyric acid (GABA) is the main inhibitory transmitter in the central nervous system (CNS) acting through ionotropic (GABAA) and metabotropic (GABAB) receptors. The GABAB receptor produces a slow inhibition since it activates second messenger systems through the binding and activation of guanine nucleotide-binding proteins [G-protein-coupled receptors (GPCRs)]. Lampreys are a key reference to understand molecular evolution in vertebrates. The importance of the GABAB receptor for the modulation of the circuits controlling locomotion and other behaviors has been shown in pharmacological/physiological studies in lampreys. However, there is no data about the sequence of the GABAB subunits or their expression in the CNS of lampreys. Our aim was to identify the sea lamprey GABAB1 and GABAB2 transcripts and study their expression in the CNS of adults. We cloned two partial sequences corresponding to the GABAB1 and GABAB2 cDNAs of the sea lamprey as confirmed by sequence analysis and comparison with known GABAB sequences of other vertebrates. In phylogenetic analyses, the sea lamprey GABAB sequences clustered together with GABABs sequences of vertebrates and emerged as an outgroup to all gnathostome sequences. We observed a broad and overlapping expression of both transcripts in the entire CNS. Expression was mainly observed in neuronal somas of the periventricular regions including the identified reticulospinal cells. No expression was observed in identifiable fibers. Comparison of our results with those reported in other vertebrates indicates that a broad and overlapping expression of the GABAB subunits in the CNS is a conserved character shared by agnathans and gnathostomes. PMID:28008311

  11. Efficacy of scallop shell powders and slaked lime for inactivating avian influenza virus under harsh conditions.

    PubMed

    Thammakarn, Chanathip; Tsujimura, Misato; Satoh, Keisuke; Hasegawa, Tomomi; Tamura, Miho; Kawamura, Akinobu; Ishida, Yuki; Suguro, Atsushi; Hakim, Hakimullah; Ruenphet, Sakchai; Takehara, Kazuaki

    2015-10-01

    The efficacy and stability of scallop shell powder (SSP) were investigated, in terms of its capacity to inactivate avian influenza virus (AIV), and compared with slaked lime (SL). An environmental simulation was conducted by emulating sunlight and wet-dry conditions. The powders were collected at consecutive 2-week intervals under sunlight and upon every resuspension. These materials were tested by mixing them with AIV and incubating the mixture for 3 min or 20 h, followed by AIV titration. At the same time, a pH buffering test was conducted by neutralization with Tris-HCl. The results revealed that SSP and SL have high alkalinity and excellent ability to inactivate AIV. In a simulated harsh environment, SSP and SL retained a satisfactory ability to inactivate AIV within 20 h throughout the experimental procedure. However, SSP was able to inactivate AIV during a short contact period (3 min), even under harsh conditions, and it was more resistant than SL to neutralization.

  12. Biomarker modulation associated with marine diesel contamination in the Iceland scallop (Chlamys islandica).

    PubMed

    Milinkovitch, Thomas; Geraudie, Perrine; Camus, Lionel; Huet, Valérie; Thomas-Guyon, Hélène

    2015-12-01

    The decrease of ice cover in the Arctic will lead to an increase of ship traffic in the upcoming decades. Consequently, oil pollution is expected. In this context, the goals of this study were to evaluate the biological impact of marine diesel contamination and, on this basis, to determine analytical tools of interest (biomarkers) for future biomonitoring of diesel spills. Using a 7-day contamination protocol, this study investigated biochemical modulations in the digestive gland of the Iceland scallop (Chlamys islandica). Incorporation of contaminants was verified assessing haemolymph metabolites. Results showed a response of glutathione-S-transferase to contamination suggesting detoxification processes and the suitability of such a tool for diesel spill biomonitoring. The lack of modulation of superoxide dismutase activity and lipid peroxidation suggests no oxidative stress and the unsuitability of these molecular tools for biomonitoring.

  13. Complete mitochondrial genome of the scalloped hammerhead Sphyrna lewini (Carcharhiniformes: Sphyrnidae).

    PubMed

    Chen, Xiao; Xiang, Dan; Xu, Yuziwei; Shi, Xiaofang

    2015-08-01

    The complete mitochondrial genome of the endangered scalloped hammerhead Sphyrna lewini was firstly determined in this study. It is 16,726 bp in length with the typical gene composition and orders in vertebrates. The overall base composition is 31.4% A, 26.3% C, 13.2% G and 29.1% T. Two start codon (ATG and GTG) and three stop codon (TAG, AGA and TAA/TA/T) patterns were found in protein-coding genes. Except for the tRNA-Ser2, the remaining 21 tRNAs can be folded into the typical cloverleaf structure. The control region possess the highest A + T content (66.1%) and lowest G content (12.6%) among all mitochondrial partitions.

  14. Scalloped depressions and small-sized polygons in western Utopia Planitia, Mars: A new formation hypothesis

    NASA Astrophysics Data System (ADS)

    Séjourné, A.; Costard, F.; Gargani, J.; Soare, R. J.; Fedorov, A.; Marmo, C.

    2011-04-01

    Flat-floored depressions with scalloped-shapes and spatially associated small-sized polygons (diameter <˜100 m) dot the landscape of western Utopia Planitia (centered at 45°N-95°E). The scalloped depressions are thought to be the result of ice-rich regolith undergoing degradation by sublimation or thaw. Current models suggest that the formation and development of the depressions occur in a poleward direction due to the enhanced sublimation of their equator-facing slopes. By contrast, we propose a conceptual model that shows the equatorward growth of depressions due to preferential degradation by sublimation of their pole-facing slopes. Our model is based on a geomorphological study of the depressions and small-sized polygons in western Utopia Planitia (80°-110°E, 35°-50°N), using images from the High Resolution Imaging Science Experiment (HiRISE) and topographical data from the Mars Orbiter Laser Altimeter (MOLA) and a HiRISE stereo Digital Elevation Model (DEM). Here we describe (i) a morphological evolution of small-sized polygons within the depressions, from low-centered to high-centered, that facilitates one's understanding of depression growth and development; and (ii) occurrence of v-shaped alcoves, failure cracks and semicircular hollows that point to a retrogressive degradation of the pole-facing slopes of depressions. We propose that the development of the depressions is due to heightened insolation of their pole-facing slopes, leading to enhanced sublimation of ground-ice. Based upon the inferred asymmetric insolation, we suggest that the equatorward expansion of depressions occurred during recent high-obliquity periods of Mars.

  15. Transcriptome Sequencing and Characterization of Japanese Scallop Patinopecten yessoensis from Different Shell Color Lines

    PubMed Central

    Chang, Yaqing; Zhao, Wenming; Du, Zhenlin; Hao, Zhenlin

    2015-01-01

    Shell color is an important trait that is used in breeding the Japanese scallop Patinopecten yessoensis, the most economically important scallop species in China. We constructed four transcriptome libraries from different shell color lines of P. yessoensis: the left and right shell mantles of ordinary strains of P. yessoensis and the left shell mantles of the ‘Ivory’ and ‘Maple’ strains. These four libraries were paired-end sequenced using the Illumina HiSeq 2000 platform and contained 54,802,692 sequences, 40,798,962 sequences, 74,019,262 sequences, and 44,466,166 sequences, respectively. A total of 214,087,082 expressed sequence tags were assembled into 73,522 unigenes with an average size of 1,163 bp. When the data were compared against the public Nr and Swiss-Prot databases using BlastX, nearly 30.55% (22,458) of the unigenes were significantly matched to known unique proteins. Gene Ontology annotation and pathway mapping analysis using the Kyoto Encyclopedia of Genes and Genomes categorized unigenes according to their diverse biological functions and processes and identified candidate genes that were potentially involved in growth, pigmentation, metal transcription, and immunity. Expression profile analysis was performed on all four libraries and many differentially expressed genes were identified. In addition, 5,772 simple sequence repeats were obtained from the P. yessoensis transcriptomes, and 464,197, 395,646, and 310,649 single nucleotide polymorphisms were revealed in the ordinary strains, the ‘Ivory’ strain, and the ‘Maple’ strain, respectively. These results provide valuable information for future genomic studies on P. yessoensis and improve our understanding of the molecular mechanisms involved in the growth, immunity, shell coloring, and shell biomineralization of this species. These resources also may be used in a variety of applications, such as trait mapping, marker-assisted breeding, studies of population genetics and genomics

  16. The Origin and Age of Scallop Floodplain Benches from Difficult Run, Fairfax County, Virginia.

    NASA Astrophysics Data System (ADS)

    Scamardo, J. E.; Pizzuto, J. E.; Skalak, K.; Benthem, A.

    2015-12-01

    Sediment is deposited within scallop-shaped erosional scarps that form between trees armoring the banks of Difficult Run, a suburban watershed with a forested riparian zone. These deposits create small (surface area 85 m2, volume 300 m3), low-lying floodplain landforms this group terms Scallop Floodplain Benches (SFB). It is hypothesized that SFB formed within the past couple decades initially forming as transversal accretion deposits and eventually gaining floodplain features dominated by vertical accretion. Stratigraphic data supports that SFB deposits begin laterally as sand and gravel bars approximately 100 cm thick, and continue to grow by vertical accretion of sand, silt, and clay. As a SFB reaches its maximum height, a distinctive levee develops adjacent to the channel, and fine-grained silt and clay are deposited behind the levee. Core samples to a depth of 118 cm and additional samples from an overbank event that occurred on June 20, 2015 were collected from one of two SFB on Difficult Run near Leesburg Pike. The grain size distribution was measured using a Coulter Counter and activities of Pb-210, Cs-137, and Be-7 were measured using High Purity Germanium Detectors. Cs-137 activities are relatively constant with depth without a well-defined peak, suggesting that the SFB was deposited after 1963. Be-7 is present in the recent flood deposits, but is absent below the surface, suggesting that the SFB deposits are at least several years old. Excess Pb-210 activities decrease exponentially with depth, and can be fit using the Constant Rate of Supply method to determine an average age of approximately 13.5 years for the SFB. The SFB is storing sediment at a rate of 27 tons/year, which is equal to 0.35% of the annual sediment load of Difficult Run, based on this average age. SFB appear to be a significant component of the sediment storage of Difficult Run and therefore should be considered in the sediment budget.

  17. Feeding and energetics of the great scallop, Pecten maximus, through a DEB model

    NASA Astrophysics Data System (ADS)

    Lavaud, Romain; Flye-Sainte-Marie, Jonathan; Jean, Fred; Emmery, Antoine; Strand, Øivind; Kooijman, Sebastiaan A. L. M.

    2014-11-01

    We developed a full life-cycle bioenergetic model for the great scallop Pecten maximus relying on the concepts of the Dynamic Energy Budget (DEB) theory. The covariation method was implemented to estimate the parameters of a standard DEB model. Such models are able to predict various metabolic processes from a food availability marker and temperature in the environment. However, suspension-feeders are likely to feed on various trophic sources, from microalgae cells to detritus. They are also able to sort and select food particles very efficiently, depending on their size, energetic value or quality. The present model includes a mechanistic description of the feeding processes, based on Kooijman's Synthesizing Unit principle which allows to deal with several food sources. Moreover we tested the hypothesis of a differential selectivity between two potential substrates (phytoplankton cell and the remaining particulate organic matter). Simulations of shell length, daily shell growth rate, dry weight and gonado-somatic index (GSI) variations were realized and compared to field data from a monitoring conducted in the Bay of Brest (Brittany, France) for six years. The model shows its capacity to efficiently reproduce all life history traits of the wild great scallops. Predicted length data were estimated to the nearest millimeter. The fit of simulated weights to observed data was very satisfactory. GSI predictions were also in accordance with observations but improvements are required to better capture the sharp increase of gametogenesis at the beginning of the year. Finally, results bring evidences that P. maximus is actually preferentially feed on living algae cells rather than on the rest of organic particles.

  18. The involvement of HSP22 from bay scallop Argopecten irradians in response to heavy metal stress.

    PubMed

    Zhang, Lei; Wang, Lingling; Song, Linsheng; Zhao, Jianmin; Qiu, Limei; Dong, Chaohua; Li, Fengmei; Zhang, Huan; Yang, Guanpin

    2010-04-01

    Heat shock protein 22 (HSP22) is an important member of small heat shock protein (sHSP) subfamily which plays a key role in the process of protecting cells, facilitating the folding of nascent peptides, and responding to stress. In the present study, the cDNA of HSP22 was cloned from Argopecten irradians (designated as AiHSP22) by rapid amplification cDNA end (RACE) based on the expressed sequence tags (ESTs). The full-length cDNA of AiHSP22 was of 1,112 bp, with an open reading frame of 588 bp encoding a polypeptide of 195 amino acids. The deduced amino acid sequence of AiHSP22 showed high similarity to previously identified HSP22s. The expression patterns of AiHSP22 mRNA in different tissues and in haemocytes of scallops exposed to Cd(2+), Pb(2+) or Cu(2+) were investigated by real-time quantitative RT-PCR. The mRNA of AiHSP22 was constitutively expressed in all examined tissues, including haemocyte, muscle, kidney, gonad, gill and heart. The expression level in heart and muscle was higher than that in other tissues. The mRNA level of AiHSP22 in haemocytes was up-regulated after a 10 days exposure of scallops to Cu(2+), Pb(2+) and Cd(2+). However, the expression of AiHSP22 did not increase linearly along with the rise of heavy metal concentration. Different concentrations of the same metal resulted in different effects on AiHSP22 expression. The sensitive response of AiHSP22 to Cu(2+), Pb(2+) and Cd(2+) stress indicated that it could be developed as an indicator of exposure to heavy metals for the pollution monitoring programs in aquatic environment.

  19. Potential impact of climate change on the Intra-Americas Sea: Part 2. Implications for Atlantic bluefin tuna and skipjack tuna adult and larval habitats

    NASA Astrophysics Data System (ADS)

    Muhling, Barbara A.; Liu, Yanyun; Lee, Sang-Ki; Lamkin, John T.; Roffer, Mitchell A.; Muller-Karger, Frank; Walter, John F., III

    2015-08-01

    Increasing water temperatures due to climate change will likely have significant impacts on distributions and life histories of Atlantic tunas. In this study, we combined predictive habitat models with a downscaled climate model to examine potential impacts on adults and larvae of Atlantic bluefin tuna (Thunnus thynnus) and skipjack tuna (Katsuwonus pelamis) in the Intra-Americas Sea (IAS). An additional downscaled model covering the 20th century was used to compare habitat fluctuations from natural variability to predicted future changes under two climate change scenarios: Representative Concentration Pathway (RCP) 4.5 (medium-low) and RCP 8.5 (high). Results showed marked temperature-induced habitat losses for both adult and larval bluefin tuna on their northern Gulf of Mexico spawning grounds. In contrast, habitat suitability for skipjack tuna increased as temperatures warmed. Model error was highest for the two skipjack tuna models, particularly at higher temperatures. This work suggests that influences of climate change on highly migratory Atlantic tuna species are likely to be substantial, but strongly species-specific. While impacts on fish populations remain uncertain, these changes in habitat suitability will likely alter the spatial and temporal availability of species to fishing fleets, and challenge equilibrium assumptions of environmental stability, upon which fisheries management benchmarks are based.

  20. Ontogenetic changes in tracheal structure facilitate deep dives and cold water foraging in adult leatherback sea turtles.

    PubMed

    Davenport, John; Fraher, John; Fitzgerald, Ed; McLaughlin, Patrick; Doyle, Tom; Harman, Luke; Cuffe, Tracy; Dockery, Peter

    2009-11-01

    Adult leatherbacks are large animals (300-500 kg), overlapping in size with marine pinniped and cetacean species. Unlike marine mammals, they start their aquatic life as 40-50 g hatchlings, so undergo a 10,000-fold increase in body mass during independent existence. Hatchlings are limited to the tropics and near-surface water. Adults, obligate predators on gelatinous plankton, encounter cold water at depth (<1280 m) or high latitude and are gigantotherms that maintain elevated core body temperatures in cold water. This study shows that there are great ontogenetic changes in tracheal structure related to diving and exposure to cold. Hatchling leatherbacks have a conventional reptilian tracheal structure with circular cartilaginous rings interspersed with extensive connective tissue. The adult trachea is an almost continuous ellipsoidal cartilaginous tube composed of interlocking plates, and will collapse easily in the upper part of the water column during dives, thus avoiding pressure-related structural and physiological problems. It is lined with an extensive, dense erectile vascular plexus that will warm and humidify cold inspired air and possibly retain heat on expiration. A sub-luminal lymphatic plexus is also present. Mammals and birds have independently evolved nasal turbinates to fulfil such a respiratory thermocontrol function; for them, turbinates are regarded as diagnostic of endothermy. This is the first demonstration of a turbinate equivalent in a living reptile.

  1. Seasonal variation in plasma catecholamines and adipose tissue lipolysis in adult female green sea turtles (Chelonia mydas).

    PubMed

    Hamann, Mark; Limpus, Colin J; Whittier, Joan M

    2003-02-15

    We investigated three aspects of potential interrenal regulation of reproduction in female green sea turtles, Chelonia mydas. First, seasonal trends in plasma catecholamines were examined from female C. mydas at different stages of their reproductive cycles. Second, variation in catecholamine levels during a nesting season were analysed in relation to restraint time, and ecological variables such as nesting habitat, body size, and reproductive investment. Third, catecholamine and corticosterone (CORT) induced lipolysis was investigated with adipose tissue collected from gravid green turtles, using in vitro incubations. Plasma epinephrine (EPI) was lowest in non-vitellogenic (1.55 +/- 0.26 ng/ml) and post-breeding (1.57 +/- 0.22 ng/ml) females, and highest in courting females (2.87 +/- 0.28). Concentrations of norepinephrine (NE) and EPI were relatively constant throughout a nesting season, and not significantly related to restraint time, reproductive investment or nesting habitat. In vitro concentrations of CORT (>3 ng/ml) and NE (2 ng/ml) induced significant release of glycerol after 6h of incubation. Epinephrine tended to induce an antilipolytic affect at low concentrations (0.25 ng/ml) and a net lipolytic response at higher concentrations (>1 ng/ml). Our data suggest that EPI may play a role in regulating body condition during vitellogenesis, and maintaining energy stores during prolonged aphagia during courtship and nesting in female green sea turtles. Furthermore, we provide preliminary evidence that suggests that catecholamine production may be either down regulated or de-sensitised in gravid female C. mydas.

  2. Electron Paramagnetic Resonance Study of Defects in γ-irradiated Marine Mussel (Mytilus galloprovincialis) and Scallop (Pecten jacobaeus) Shells

    NASA Astrophysics Data System (ADS)

    Köseoğlu, R.; Köksal, F.; Birey, M.

    2004-11-01

    EPR studies have been performed on some gamma-irradiated marine mussels (Mytilus galloprovincialis) and scallops (Pecten jacobaeus) from the families of Mytilidae and Pectinidae, respectively. Before γ-irradiation, the EPR lines of Mytilus galloprovincialis indicated the existence of Mn2+ ions, which were not observed in the powders of scallop shells. γ -irradiation induced defects in powders of Mytilus galloprovincialis shells, were attributed to orthorhombic CO-3 , axial CO3-3 , orthorhombic CO-2 , freely rotating CO-2 , freely rotating SO-2 , axial SO-3 , isotropic PO2-4 and organic free radicals. γ -irradiation induced defects in powders of Pecten jacobaeus shells were attributed to orthorhombic CO-3 , axial CO3-3 , orthorhombic CO-2 , freely rotating CO-2 , freely rotating SO-2 , and axial SO-3 free radicals. The EPR parameters of the free radicals were compared with literature data on similar defects

  3. Microsatellite-centromere mapping in Japanese scallop ( Patinopecten yessoensis) through half-tetrad analysis in gynogenetic diploid families

    NASA Astrophysics Data System (ADS)

    Li, Qi; Qi, Mingjun; Nie, Hongtao; Kong, Lingfeng; Yu, Hong

    2016-06-01

    Gene-centromere mapping is an essential prerequisite for understanding the composition and structure of genomes. Half-tetrad analysis is a powerful tool for mapping genes and understanding chromosomal behavior during meiosis. The Japanese scallop ( Patinopecten yessoensis), a cold-tolerant species inhabiting the northwestern Pacific coast, is a commercially important marine bivalve in Asian countries. In this study, inheritance of 32 informative microsatellite loci was examined in 70-h D-shaped larvae of three induced meiogynogenetic diploid families of P. yessoensis for centromere mapping using half-tetrad analysis. The ratio of gynogenetic diploids was proven to be 100%, 100% and 96% in the three families, respectively. Inheritance analysis in the control crosses showed that 51 of the 53 genotypic ratios observed were in accordance with Mendelian expectations at the 5% level after Bonferroni correction. Seven of the 32 microsatellite loci showed the existence of null alleles in control crosses. The second division segregation frequency ( y) of the microsatellite loci ranged from 0.07 to 0.85 with a mean of 0.38, suggesting the existence of positive interference after a single chiasma formation in some chromosomes in the scallop. Microsatellite-centromere distances ranged from 4 cM to 42 cM under the assumption of complete interference. Information on the positions of centromeres in relation to the microsatellite loci will represent a contribution towards the assembly of genetic maps in the commercially important scallop species.

  4. Mercury content in tinned molluscs (mussel, cockle, variegated scallop, and razor shell) normally consumed in Spain, 2005.

    PubMed

    Gutiérrez, Angel José; Lozano, Gonzalo; González, Tomás; Ignacio Reguera, Juan; Hardisson, Arturo

    2006-09-01

    Concentrations of mercury were determined for tinned molluscs (Mollusca, Bivalvia), i.e., mussels (Mytilus spp.), cockles (Cerastoderma edule), variegated scallops (Chlamys varia), and razor shells (Ensis spp.), consumed in Spain. A total of 220 samples were analyzed: 120 mussels, 40 cockles, 24 variegated scallops, and 36 razor shells. Samples were obtained weekly from markets in Santa Cruz de Tenerife (Canary Islands) over a period of 12 months. All observed concentrations of mercury were below the maximum permitted for human consumption (0.5 mg/kg) as defined by European Community Decision 93/ 351/CE. Mercury concentrations were 27.28 +/- 12.43 microg/kg for mussels, 66.59 +/- 23.53 microg/kg for cockles, 33.68 +/- 15.76 microg/kg for variegated scallops, and 21.26 +/- 12.24 microg/kg for razor shells. To evaluate the importance of mercury as a food contaminant, the percentage ingested daily, the weight of mercury in the diet, and the calculated percentage of this metal in the diet contributed by reference species were estimated.

  5. Physical mapping of immune-related genes in Yesso scallop (Patinopecten yessoensis) using fluorescent in situ hybridization

    PubMed Central

    Yang, Zujing; Li, Xuan; Liao, Huan; Hu, Liping; Zhang, Zhengrui; Zhao, Bosong; Huang, Xiaoting; Bao, Zhenmin

    2016-01-01

    Abstract The innate immune system plays a pivotal role in defending invasion of microorganisms for scallops. Previous studies on immune-related genes in the Yesso scallop, Patinopecten yessoensis (Jay, 1857) have mainly focused on characterization and expression pattern in response to bacterial challenge, no research has been carried out on the cytogenetic level yet. In the present study, eight fosmid clones containing the sequences of key immune-related genes (PyNFkB, PyTRAF2, PyTRAF4, PyTRAF7, PyMyd88-1, PyMyd88-3, PyMKK-7 and PyTNFR) were isolated and seven of them were successfully mapped on chromosomes of Patinopecten yessoensis utilizing fluorescence in situ hybridization. Wherein, PyMyd88-1, PyMyd88-3 and PyMKK-7 located on the same chromosome pair with adjacent positions and the other genes were mapped on four non-homologous chromosome pairs, showing a similar distribution to another five model species. The isolation and mapping of such genes of the Yesso scallop will lay a foundation for studies such as assignment of interested genes to chromosomes, construction cytogenetic maps and so on. PMID:28123676

  6. A small-scale comparison of Iceland scallop size distributions obtained from a camera based autonomous underwater vehicle and dredge survey.

    PubMed

    Singh, Warsha; Örnólfsdóttir, Erla B; Stefansson, Gunnar

    2014-01-01

    An approach is developed to estimate size of Iceland scallop shells from AUV photos. A small-scale camera based AUV survey of Iceland scallops was conducted at a defined site off West Iceland. Prior to height estimation of the identified shells, the distortions introduced by the vehicle orientation and the camera lens were corrected. The average AUV pitch and roll was 1.3 and 2.3 deg that resulted in <2% error in ground distance rendering these effects negligible. A quadratic polynomial model was identified for lens distortion correction. This model successfully predicted a theoretical grid from a frame photographed underwater, representing the inherent lens distortion. The predicted shell heights were scaled for the distance from the bottom at which the photos were taken. This approach was validated by height estimation of scallops of known sizes. An underestimation of approximately 0.5 cm was seen, which could be attributed to pixel error, where each pixel represented 0.24 x 0.27 cm. After correcting for this difference the estimated heights ranged from 3.8-9.3 cm. A comparison of the height-distribution from a small-scale dredge survey carried out in the vicinity showed non-overlapping peaks in size distribution, with scallops of a broader size range visible in the AUV survey. Further investigations are necessary to evaluate any underlying bias and to validate how representative these surveys are of the true population. The low resolution images made identification of smaller scallops difficult. Overall, the observations of very few small scallops in both surveys could be attributed to low recruitment levels in the recent years due to the known scallop parasite outbreak in the region.

  7. A Small-Scale Comparison of Iceland Scallop Size Distributions Obtained from a Camera Based Autonomous Underwater Vehicle and Dredge Survey

    PubMed Central

    Singh, Warsha; Örnólfsdóttir, Erla B.; Stefansson, Gunnar

    2014-01-01

    An approach is developed to estimate size of Iceland scallop shells from AUV photos. A small-scale camera based AUV survey of Iceland scallops was conducted at a defined site off West Iceland. Prior to height estimation of the identified shells, the distortions introduced by the vehicle orientation and the camera lens were corrected. The average AUV pitch and roll was and deg that resulted in error in ground distance rendering these effects negligible. A quadratic polynomial model was identified for lens distortion correction. This model successfully predicted a theoretical grid from a frame photographed underwater, representing the inherent lens distortion. The predicted shell heights were scaled for the distance from the bottom at which the photos were taken. This approach was validated by height estimation of scallops of known sizes. An underestimation of approximately cm was seen, which could be attributed to pixel error, where each pixel represented cm. After correcting for this difference the estimated heights ranged from cm. A comparison of the height-distribution from a small-scale dredge survey carried out in the vicinity showed non-overlapping peaks in size distribution, with scallops of a broader size range visible in the AUV survey. Further investigations are necessary to evaluate any underlying bias and to validate how representative these surveys are of the true population. The low resolution images made identification of smaller scallops difficult. Overall, the observations of very few small scallops in both surveys could be attributed to low recruitment levels in the recent years due to the known scallop parasite outbreak in the region. PMID:25303243

  8. Interactive effects of near-future temperature increase and ocean acidification on physiology and gonad development in adult Pacific sea urchin, Echinometra sp . A

    NASA Astrophysics Data System (ADS)

    Uthicke, S.; Liddy, M.; Nguyen, H. D.; Byrne, M.

    2014-09-01

    Increased atmospheric CO2 will have a twofold impact on future marine ecosystems, increasing global sea surface temperatures and uptake of CO2 (Ocean Acidification). Many experiments focus on the investigation of one of these stressors, but under realistic future climate predictions, these stressors may have interactive effects on individuals. Here, we investigate the effect of warming and acidification in combination. We test for interactive effects of potential near-future (2100) temperature (+2 to 3 °C) and pCO2 (~860-940 μAtm) levels on the physiology of the tropical echinoid Echinometra sp . A. The greatest reduction in growth was under simultaneous temperature and pH/ pCO2 stress (marginally significant temperature × pH/ pCO2 interaction). This was mirrored by the physiological data, with highest metabolic activity (measured as respiration and ammonium excretion) occurring at the increased temperature and pCO2 treatment, although this was not significant for excretion. The perivisceral coelomic fluid pH was ~7.5-7.6, as typical for echinoids, and showed no significant changes between treatments. Indicative of active calcification, internal magnesium and calcium concentrations were reduced compared to the external medium, but were not different between treatments. Gonad weight was lower at the higher temperature, and this difference was more distinct and statistically significant for males. The condition of the gonads assessed by histology declined in increased temperature and low pH treatments. The Echinometra grew in all treatments indicating active calcification of their magnesium calcite tests even as carbonate mineral saturation decreased. Our results indicate that the interactive temperature and pH effects are more important for adult echinoids than individual stressors. Although adult specimens grow and survive in near-future conditions, higher energy demands may influence gonad development and thus population maintenance.

  9. Scallop phenylalanine hydroxylase implicates in immune response and can be induced by human TNF-α.

    PubMed

    Zhou, Zhi; Wang, Lingling; Wang, Mengqiang; Zhang, Huan; Wu, Tiantian; Qiu, Limei; Song, Linsheng

    2011-12-01

    Phenylalanine hydroxylase (PAH) is an important metabolic enzyme of aromatic amino acids, which is responsible for the irreversible oxidation of phenylalanine to tyrosine. In the present study, the full-length cDNA encoding PAH from Chlamys farreri (designated CfPAH) was cloned by using rapid amplification of cDNA ends (RACE) approaches and expression sequence tag (EST) analysis. The open reading frame of CfPAH encoded a polypeptide of 460 amino acids, and its sequence shared 64.4-74.2% similarity with those of PAHs from other animals. There were an N-terminal regulatory ACT domain and a C-terminal catalytic Biopterin_H domain in the deduced CfPAH protein. The mRNA transcripts of CfPAH could be detected in all the tested tissues, including adductor muscle, mantle, gill, gonad, haemocytes and hepatopancreas. And its expression level in haemocytes was increased significantly during 3-48 h after bacteria Vibrio anguillarum challenge with the highest level (9.1-fold, P < 0.05) at 24 h. Furthermore, the mRNA expression of CfPAH in haemocytes also increased significantly to 2.6-fold (P < 0.05) at 4 h and 3.3-fold (P < 0.05) at 6 h after the stimulation of 50.0 ng mL(-1) human TNF-α. The cDNA fragment encoding the mature peptide of CfPAH was recombined and expressed in the prokaryotic expression system, and 1 mg recombinant CfPAH protein (rCfPAH) could catalyze the conversion of 192.23 ± 32.35 nmol phenylalanine to tyrosine within 1 min (nmol min(-1) mg(-1) protein) in vitro. These results indicated collectively that CfPAH, as a homologue of phenylalanine hydroxylase in scallop C. farreri, could be induced by cytokine and involved in the immunomodulation of scallops by supplying the starting material tyrosine for the synthesis of melanin and catecholamines.

  10. Contractile properties of the striated adductor muscle in the bay scallop Argopecten irradians at several temperatures.

    PubMed

    Olson, J M; Marsh, R L

    1993-03-01

    The isometric and isotonic contractile properties of the cross-striated adductor muscle of the bay scallop (Argopecten irradians) were measured in vitro at 10, 15 and 20 degrees C. The length at which twitch force was maximal as a function of the closed length in situ (L0/Lcl) averaged 1.38 +/- 0.01 (mean +/- S.E.M.) at 10 degrees C. This length is very close to the typical length at maximum gape during natural swimming at this temperature. Passive force was very low over the range of lengths measured here; at L0, passive force averaged approximately 0.08 N cm-2, or only 0.5% of the corresponding peak twitch force. The mean peak isometric twitch force (Ptw,max) at 10 degrees C was 21.43 +/- 0.68 N cm-2 (S.E.M.), and the ratio of peak twitch force to tetanic force (Ptw,max/P0) averaged 0.89 +/- 0.01. Temperature did not affect either twitch force (Ptw), once fatigue was taken into account, or Ptw,max/P0. In contrast, the time-related properties of twitch contractions (latent period, tL; time to peak tension, tPtw; and time from peak tension to half-relaxation, t50%R) were positively modified by temperature at all temperatures measured (Q10 > 1.8). All three properties were more temperature-sensitive over the range 10-15 degrees C than over the range 15-20 degrees C. The force-velocity relationships of the striated adductor muscle were fitted to the hyperbolic-linear (HYP-LIN) equation. The force-velocity curves of the striated adductor muscle of the scallop were strongly influenced by temperature. Maximal velocity at zero force (Vmax), and therefore maximal power output, increased significantly with temperature. The Q10 over the temperature range 10-15 degrees C (1.42) was significantly lower than that over the range 15-20 degrees C (2.41). The shape of the force-velocity relationship, assessed through comparisons of the power ratio (Wmax/VmaxP0), was not influenced by temperature.

  11. DNA-methylation dependent regulation of embryo-specific 5S ribosomal DNA cluster transcription in adult tissues of sea urchin Paracentrotus lividus.

    PubMed

    Bellavia, Daniele; Dimarco, Eufrosina; Naselli, Flores; Caradonna, Fabio

    2013-10-01

    We have previously reported a molecular and cytogenetic characterization of three different 5S rDNA clusters in the sea urchin Paracentrotus lividus and recently, demonstrated the presence of high heterogeneity in functional 5S rRNA. In this paper, we show some important distinctive data on 5S rRNA transcription for this organism. Using single strand conformation polymorphism (SSCP) analysis, we demonstrate the existence of two classes of 5S rRNA, one which is embryo-specific and encoded by the smallest (700 bp) cluster and the other which is expressed at every stage and encoded by longer clusters (900 and 950 bp). We also demonstrate that the embryo-specific class of 5S rRNA is expressed in oocytes and embryonic stages and is silenced in adult tissue and that this phenomenon appears to be due exclusively to DNA methylation, as indicated by sensitivity to 5-azacytidine, unlike Xenopus where this mechanism is necessary but not sufficient to maintain the silenced status.

  12. The environmental impacts of three different queen scallop (Aequipecten opercularis) fishing gears.

    PubMed

    Hinz, Hilmar; Murray, Lee G; Malcolm, Fraser R; Kaiser, Michel J

    2012-02-01

    The negative impact of demersal fishing gears on the marine environment may be mitigated by utilizing less damaging fishing gears. Within this context three queen scallop fishing gears were tested for their catch efficiencies and their environmental impact on benthos: a traditional 'Newhaven' dredge, a new dredge design with a rubber lip instead of the traditional teeth as its main new design feature and an otter trawl. Both, the new dredge and the otter trawl showed high catches and relatively low by-catches. Catches made with the traditional dredge were lower and contained larger amounts of non-target species. Both dredges primarily caught invertebrate species, while by-catches of the otter trawl were dominated by demersal fish. The impact of these gears on the benthic biota demonstrated that while no effects were detected for the otter trawl both dredges showed similar negative effects. Clear negative effects were evident for the brittlestar Ophiura ophiura while positive trends for the common starfish Asterias rubens and the hermit crab Pagurus bernhardus indicated scavenging effects. Due to its higher catch efficiency the new dredge caused less damage per unit catch compared to the traditional dredge, yet compared to the otter trawl it appears less environmentally friendly. However, the new dredge may be an alternative to the otter trawls for fisheries where the by-catch of demersal fish has been identified as a significant problem.

  13. Isolation, characterization, and multiplexing of novel microsatellite markers for the tropical scalloped spiny lobster (Panulirus homarus).

    PubMed

    Delghandi, M; Goddard, S; Jerry, D R; Dao, H T; Afzal, H; Al-Jardani, S S

    2015-12-29

    Of the various spiny lobster species in the tropical and subtropical Indo-West Pacific region, the tropical scalloped spiny lobster (Panulirus homarus) supports one of the most commercially valuable fishery resources in many coastal African and Asian countries. The last decade has witnessed a serious decline in the wild populations of this species. Knowledge of the genetic basis of spiny lobster population structure is a prerequisite to achieve a sustainable fisheries management for this species. Here, we describe 13 novel polymorphic microsatellite markers developed for P. homarus, using a cross-species primer design strategy based on P. ornatus Roche 454 shot-gun generated sequencing. Microsatellite polymorphisms were assessed in 96 unrelated P. homarus individuals of a natural population, with the number of alleles per locus varying from 2 to 14, the observed and expected heterozygosity from 0.00 to 0.78 and from 0.03 to 0.79, respectively, and with only four loci (Pho-G27, Pho-G32, Pho-G36, and Pho-G58) deviating from Hardy- Weinberg equilibrium. Genetic linkage disequilibrium analysis between all pairs of the loci showed significant departure from the null hypothesis between loci Pho-G22 - Pho-G30, and Pho-G30 - Pho-G35. The successful cross amplification of these microsatellites highlights the potential of the developed microsatellites for future population genetic research within the different Panulirus species.

  14. Morphological effect of a scallop shell on a flapping-type tidal stream generator.

    PubMed

    Le, Tuyen Quang; Ko, Jin Hwan; Byun, Doyoung

    2013-09-01

    Inspired by nature, flapping-type tidal stream generators have been introduced in recent years. The improvement in their power generation ability is known to be a critical factor in the success of these generators. So far, corrugation and camber observed in flying insects and swimming animals are known to enhance the performance of a flapping-type propulsive system. In this study, we explore the effect of corrugation and camber in a system that mimics a scallop shell in terms of its ability to extract flow energy through a two-dimensional Navier-Stokes simulation. The simulations show that the size and the activity of the leading edge vortex are strongly affected by the morphological factors of the mimicked foils, the effects of which are then advantageous in terms of the power efficiency of the flapping-type tidal stream generator. Eventually, an optimal mimicked foil, as suggested based on the morphological effects, would be a good alternative type of foil with a typical section with regard to the hydrodynamic performance and structural properties of tidal stream generators.

  15. Visualization of an unstable coiled coil from the scallop myosin rod.

    PubMed

    Li, Yu; Brown, Jerry H; Reshetnikova, Ludmilla; Blazsek, Antal; Farkas, László; Nyitray, László; Cohen, Carolyn

    2003-07-17

    Alpha-helical coiled coils in muscle exemplify simplicity and economy of protein design: small variations in sequence lead to remarkable diversity in cellular functions. Myosin II is the key protein in muscle contraction, and the molecule's two-chain alpha-helical coiled-coil rod region--towards the carboxy terminus of the heavy chain--has unusual structural and dynamic features. The amino-terminal subfragment-2 (S2) domains of the rods can swing out from the thick filament backbone at a hinge in the coiled coil, allowing the two myosin 'heads' and their motor domains to interact with actin and generate tension. Most of the S2 rod appears to be a flexible coiled coil, but studies suggest that the structure at the N-terminal region is unstable, and unwinding or bending of the alpha-helices near the head-rod junction seems necessary for many of myosin's functional properties. Here we show the physical basis of a particularly weak coiled-coil segment by determining the 2.5-A-resolution crystal structure of a leucine-zipper-stabilized fragment of the scallop striated-muscle myosin rod adjacent to the head-rod junction. The N-terminal 14 residues are poorly ordered; the rest of the S2 segment forms a flexible coiled coil with poorly packed core residues. The unusual absence of interhelical salt bridges here exposes apolar core atoms to solvent.

  16. Sperm nuclear expansion and meiotic maturation in normal and gynogenetic eggs of the scallop, Chlamys farreri

    NASA Astrophysics Data System (ADS)

    Pan, Ying; Li, Qi; Yu, Ruihai; Wang, Rucai

    2008-02-01

    Sperm nuclear expansion, meiosis and the association of the male and female pronuclei leading to the four-cell stage in normal Chlamys farreri eggs were observed under a fluorescence microscope. The effects of ultraviolet (UV) irradiation on the fertilizing sperm were also examined. Both normal and UV-irradiated sperm nuclei enlarged at three distinct phases (phase A, metaphase I; phase B, polar body formation; and phase C, female pronuclear development and expansion) that were temporally correlated with meiotic process of the maternal chromosomes. Sperm nuclei underwent a rapid, initial enlargement during phase A, but condensed slightly during phase B, then re-enlarged during phase C. The effects of UV irradiation were not apparent during transformation of the sperm nucleus into a male pronucleus, and there was not any apparent effect on meiotic maturation and development of the female pronucleus. However, the rate of expansion of the UV-irradiated sperm nuclei and the size of male pronuclei were reduced apparently. Unlike the female pronucleus, the male pronucleus derived from sperm genome inactivated by UV irradiation did not form chromosomes, but became a dense chromatin body (DCB). At mitotic anaphase, DCB did not participate in the karyokinesis of the first cleavage as evidenced by chromosomal nondisjunction, demonstrating the effectiveness of using UV irradiation to induce gynogenetic scallop embryos.

  17. Inhibition of Listeria monocytogenes and Salmonella enteritidis on chicken wings using scallop-shell powder.

    PubMed

    Cagri-Mehmetoglu, A

    2011-11-01

    The present study was designed to determine the inhibitory effect of scallop-shell powder (SSP) on Listeria monocytogenes and Salmonella enteritidis on chicken wings. Chicken wings artificially inoculated with L. monocytogenes (8.3 log(10) cfu/g) or S. enteritidis (8.8 log(10) cfu/g) were immersed in distilled water (0.10 or 0.50% wt/vol) of SSP slurries for 10 or 30 min, respectively. The amount of L. monocytogenes, S. enteritidis, mesophilic aerobic bacteria (MAB), and yeast or mold was determined for the chicken wings at d 0 or 7 of storage at 4°C. Results indicated that 0.5% SSP decreased the amount of L. monocytogenes and S. enteritidis on chicken wings by 3.7 and 5.0 log(10) cfu/g, respectively. The growth of L. monocytogenes, S. enteritidis, MAB, and yeast or mold was inhibited by SSP during the 7-d refrigerated storage. Color and odor of chicken wings were not significantly changed by SSP treatment (P > 0.05).

  18. Further developmental roles of the Vestigial/Scalloped transcription complex during wing development in Drosophila melanogaster.

    PubMed

    Srivastava, Ajay; Bell, John B

    2003-05-01

    The Drosophila homologue of the human TEF-1 gene, scalloped (sd), is required for wing development. The SD protein forms part of a transcriptional activation complex with the protein encoded by vestigial (vg) that, in turn, activates target genes important for wing formation. One sd function involves a regulatory feedback loop with vg and wingless (wg) that is essential in this process. The dorsal-ventral (D/V) margin-specific expression of wg is lost in sd mutant wing discs while the hinge-specific expression appears normal. In the context of wing development, a VG::sdTEA domain fusion produces a protein that mimics the wild-type SD/VG complex and restores the D/V boundary-specific expression of wg in a sd mutant background. Further, targeted expression of wg at the D/V boundary in the wing disc was able to partially rescue the sd mutant phenotype. This infers that sd could function in either the maintenance or induction of wg at the D/V border. Another functional role for sd is the establishment of sensory organ precursors (SOP) of the peripheral nervous system at the wing margin. Thus, the relationship between sd and senseless (sens) in the development of these cells is also examined, and it appears that sd must be functional for proper sens expression, and ultimately, for sensory organ precursor development.

  19. Alternative requirements for Vestigial, Scalloped, and Dmef2 during muscle differentiation in Drosophila melanogaster.

    PubMed

    Deng, Hua; Hughes, Sarah C; Bell, John B; Simmonds, Andrew J

    2009-01-01

    Vertebrate development requires the activity of the myocyte enhancer factor 2 (mef2) gene family for muscle cell specification and subsequent differentiation. Additionally, several muscle-specific functions of MEF2 family proteins require binding additional cofactors including members of the Transcription Enhancing Factor-1 (TEF-1) and Vestigial-like protein families. In Drosophila there is a single mef2 (Dmef2) gene as well single homologues of TEF-1 and vestigial-like, scalloped (sd), and vestigial (vg), respectively. To clarify the role(s) of these factors, we examined the requirements for Vg and Sd during Drosophila muscle specification. We found that both are required for muscle differentiation as loss of sd or vg leads to a reproducible loss of a subset of either cardiac or somatic muscle cells in developing embryos. This muscle requirement for Sd or Vg is cell specific, as ubiquitous overexpression of either or both of these proteins in muscle cells has a deleterious effect on muscle differentiation. Finally, using both in vitro and in vivo binding assays, we determined that Sd, Vg, and Dmef2 can interact directly. Thus, the muscle-specific phenotypes we have associated with Vg or Sd may be a consequence of alternative binding of Vg and/or Sd to Dmef2 forming alternative protein complexes that modify Dmef2 activity.

  20. Adaptive scallop height tool path generation for robot-based incremental sheet metal forming

    NASA Astrophysics Data System (ADS)

    Seim, Patrick; Möllensiep, Dennis; Störkle, Denis Daniel; Thyssen, Lars; Kuhlenkötter, Bernd

    2016-10-01

    Incremental sheet metal forming is an emerging process for the production of individualized products or prototypes in low batch sizes and with short times to market. In these processes, the desired shape is produced by the incremental inward motion of the workpiece-independent forming tool in depth direction and its movement along the contour in lateral direction. Based on this shape production, the tool path generation is a key factor on e.g. the resulting geometric accuracy, the resulting surface quality, and the working time. This paper presents an innovative tool path generation based on a commercial milling CAM package considering the surface quality and working time. This approach offers the ability to define a specific scallop height as an indicator of the surface quality for specific faces of a component. Moreover, it decreases the required working time for the production of the entire component compared to the use of a commercial software package without this adaptive approach. Different forming experiments have been performed to verify the newly developed tool path generation. Mainly, this approach serves to solve the existing conflict of combining the working time and the surface quality within the process of incremental sheet metal forming.

  1. Expression pattern of phb2 and its potential function in spermatogenesis of scallop ( Chlamys farreri)

    NASA Astrophysics Data System (ADS)

    Han, Tiantian; Ma, Xiaoshi; Liang, Shaoshuai; Gao, Beibei; Zhang, Zhifeng

    2015-12-01

    Prohibitin (PHB) participates in several biological processes including apoptosis, transcription regulation and suppression of cell proliferation in mammals. In this study, we cloned the full-length cDNA of prohibitin 2 ( Cf-phb2) from the testis of scallop ( Chlamys farreri). The deduced amino acid sequence presented a characteristic of PHB family with the PHB domain, and clustered with PHB2 of other species. Temporal and spatial expression of Cf-phb2 in testis during the reproductive cycle was detected by quantitative real-time PCR (qRT-PCR) and in situ hybridization. The expression of Cf-phb2 in the testis increased when testis developed from the resting stage to mature stage. The mRNA abundance of Cf-phb2 was the highest at mature stage, which was about 15-fold higher than that at proliferative stage. The expression of Cf-phb2 could be detected by in situ hybridization in all types of germ cells in testis, including spermatogonia, spermatocytes, spermatids and spermatozoa. The intensity of the signal increased with the spermatogenesis and was the highest in spermatids, which suggested that CF-PHB2 might affect the spermatogenesis of C. farreri.

  2. Asymmetric hemoglobins, their thiol content, and blood glutathione of the scalloped hammerhead shark, Sphyrna lewini.

    PubMed

    Dafré, A L; Reischl, E

    1997-03-01

    Starch gel electrophoresis pH 8.6, or PAGE pH 8.9, of the scalloped hammerhead shark hemolysates showed three hemoglobins (Hb). An additional Hb between the two most mobile electrophoretic components was seen in starch gel electrophoresis, pH 8.1, and also in highly loaded PAGE gels. The relative concentration of these Hbs was variable among individuals, when accessed at pH 8.1. Dilution of hemolysates led to a redistribution of the Hb tetramer subunits. Under denaturing conditions, the unfractionated hemolysate was resolved in 3 Hb subunits. Isolated Hbs, named SL I-SL IV, showed unusual subunit compositions: SL I, the least mobile, is "b3c"; SL II is "a2bc"; SL III and SL IV are composed only by "a" subunits. Hemoglobins in the whole hemolysate have an average of two reactive cysteines per tetramer, which were not easily S-thiolated by glutathione, as is the case for related species. After hemoglobin denaturation, six additional -SH groups were titrated by Ellman's reagent. Methemoglobin content was low in the erythrocytes of nine examined specimens, 1.13 +/- 1.90%. High values for total erythrocyte glutathione (GSH) were found: 4.5 +/- 0.7 mM; n = 7. The ratio of 1.4 +/- 0.4 GSH/Hb is higher than usually reported for mammalians.

  3. Investigations of peritoneal and intestinal infections of adult hookworms (Uncinaria spp.) in northern fur seal (Callorhinus ursinus) and California sea lion (Zalophus californianus) pups on San Miguel Island, California (2003).

    PubMed

    Lyons, Eugene T; Delong, R L; Nadler, S A; Laake, J L; Orr, A J; Delong, B L; Pagan, C

    2011-09-01

    The peritoneal cavity (PNC) and intestine of northern fur seal (Callorhinus ursinus) pups and California sea lion (Zalophus californianus) pups that died in late July and early August, 2003, on San Miguel Island, California, were examined for hookworms. Prevalence and morphometric studies were done with the hookworms in addition to molecular characterization. Based on this and previous molecular studies, hookworms from fur seals are designated as Uncinaria lucasi and the species from sea lions as Uncinaria species A. Adult hookworms were found in the PNC of 35 of 57 (61.4%) fur seal pups and of 13 of 104 (12.5%) sea lion pups. The number of hookworms located in the PNC ranged from 1 to 33 (median = 3) for the infected fur seal pups and 1 to 16 (median = 2) for the infected sea lion pups. In addition to the PNC, intestines of 43 fur seal and 32 sea lion pups were examined. All of these pups were positive for adult hookworms. The worms were counted from all but one of the sea lion pups. Numbers of these parasites in the intestine varied from 3 to 2,344 (median = 931) for the fur seal pups and 39 to 2,766 (median = 643) for the sea lion pups. Sea lion pups with peritoneal infections had higher intensity infections in the intestines than did pups without peritoneal infections, lending some support for the hypothesis that peritoneal infections result from high-intensity infections of adult worms. There was no difference in intestinal infection intensities between fur seal pups with and without peritoneal infections. Female adult hookworms in the intestines of both host species were significantly larger than males, and sea lion hookworms were larger than those in fur seals. Worms in the intestine also were larger than worms found in the PNC. Gene sequencing and (RFLP) analysis of (PCR) amplified (ITS) ribosomal DNA were used to diagnose the species of 172 hookworms recovered from the PNC and intestine of 18 C. ursinus and seven Z. californianus hosts

  4. Current prevalence of adult Uncinaria spp. in northern fur seal (Callorhinus ursinus) and California sea lion (Zalophus californianus) pups on San Miguel Island, California, with notes on the biology of these hookworms.

    PubMed

    Lyons, E T; Melin, S R; DeLong, R L; Orr, A J; Gulland, F M; Tolliver, S C

    2001-06-28

    A prevalence survey for hookworms (Uncinaria spp.) was done in northern fur seal (Callorhinus ursinus) and California sea lion (Zalophus californianus) pups on San Miguel Island, CA, in 2000. Intestines of dead pups were examined for adult hookworms in July. These parasites were found in 95% of 20 fur seal pups and 100% of 31 sea lion pups. The number of hookworms varied from 4 to 2142 (mean = 760) in fur seal pups and from 20 to 2634 (mean = 612) in sea lion pups. A direct relationship was evident between body condition and number of hookworms in the pups; that is, pups in poor condition had fewer hookworms than those in good condition. There was a decline in the number of hookworms in sea lion pups in 2000 compared to collections in 1996. Eggs of Uncinaria spp. were found in rectal feces (collected in late September and early October) of none of 35 (0%) live fur seal pups and 41 of 48 (85%) live sea lion pups. Packed cell volume values, determined for most of the same live pups, were essentially normal for C. ursinus but were much lower than normal for most Z. californianus. Hookworm larvae were not found in blubber of fur seal and sea lion pups or in rookery sand in July. Rookery sand, positive for live hookworm larvae when put in a refrigerator, was negative at removal 2.5 years later. The average number of eggs in utero of female hookworms was 285 for three specimens from a fur seal pup and 281 from three specimens from a sea lion pup. One hookworm larva was recovered from milk stripped from the teats of a stranded Z. californianus female at The Marine Mammal Center, Sausalito, CA.

  5. Potentially toxic filamentous fungi associated to the economically important Nodipecten nodosus (Linnaeus, 1758) scallop farmed in southeastern Rio de Janeiro, Brazil.

    PubMed

    Santos, Antônia; Hauser-Davis, Rachel Ann; Santos, Manoel José Soares; De Simone, Salvatore Giovani

    2017-02-15

    Numerous countries have been confronted with infectious diseases in mariculture activities, including fungi infections, although reports in scallops are scarce. Thus, this study aimed to investigate the occurrence of filamentous fungi in Nodipecten nodosus specimens from three marine farms in Southeastern Brazil. Eight fungi genera were observed in the branchial arches, intestine and muscle tissue of the scallop specimens. These include potentially toxin-producing species, such as Aspergillus, Penicillium and Fusarium. Their presence may lead to potential public health concerns, since all sampling sites showed the presence of fungi in all scallop organs, with special concern regarding edible muscle tissue. A significant number of species was observed at one of the study areas, which could indicate a previously unknown source of contamination, since increases in fungi species richness in polluted coastal waters have been reported. This is also, to the best of our knowledge, the first report of Pestalotiopsis in shellfish.

  6. Application of SSH and quantitative real time PCR to construction of gene expression profiles from scallop Chlamys farreri in response to exposure to tetrabromobisphenol A.

    PubMed

    Gong, Xiaoli; Pan, Luqing; Miao, Jingjing; Liu, Na

    2012-11-01

    TBBPA-induced genes were identified using suppression subtractive hybridization (SSH) from Chlamys farreri. A total of 203 and 44 clones from SSH forward and reverse library were respectively obtained including cellular process, immune system process, response to stimulus, metabolic process and signaling etc. Differential gene expressions were compared between scallops from control and TBBPA treatment groups (400 μg/L, 15 days) using quantitative real time RT-PCR. For further research, eight significant genes expression from scallops exposed to TBBPA (0; 100; 200; 400 μg/L) sampling at 0, 1, 3, 6 and 15 days, were utilized for Q-RT-PCR. The results revealed that the expression level of most selected cDNAs was dominantly up-regulated or down-regulated in the TBBPA-induced scallops. These findings provide basic genomic information of the bivalve and the selected genes may be the potential molecular biomarkers for TBBPA pollution in aquatic environment.

  7. Satellite Studies of Interactions Between Antarctic Circumpolar Current Eddies and Sea Ice

    NASA Astrophysics Data System (ADS)

    Springer, S. R.; Padman, L.; Dinniman, M. S.

    2015-12-01

    Wintertime sea ice extent around Antarctica has shown a positive trend during at least the past decade. The maximum northward expansion of sea ice is likely to be limited by the strong ocean temperature gradients associated with fronts of the Antarctic Circumpolar Current (ACC). The ACC is, however, very dynamically unstable, with mesoscale eddies accounting for a large fraction of the variance in surface currents and sea surface temperature (SST). We combine satellite-observed sea-ice concentration, SST, and geostrophic eddy velocities to explore the hypothesis that dynamic and thermodynamic interactions between mesoscale eddies and sea ice exert an additional influence on the location of the winter sea ice margin. Advancing sea ice develops meridional deviations at horizontal scales of ~100 km, lengthening the perimeter of the ice-covered area by 30-70%. In many cases, this "scalloping" of the ice margin can be attributed to advection by eddy velocities. The effect varies regionally, depending on the proximity of the ice edge to the ACC. From the Amundsen Sea eastward through the Drake Passage the southern limit of eddy variability coincides with the northernmost extent of sea ice, and scalloping is common. By deforming the ice margin, eddies increase the potential for ice-edge melting and destruction by Southern Ocean surface wave action, while eddy-driven ice advection modifies the mean thermodynamic exchanges responsible for mass loss from the base of the ice pack. We use observations and models to estimate sea-ice loss caused by eddy/ice interactions.

  8. Short-Term Behavioural Responses of the Great Scallop Pecten maximus Exposed to the Toxic Alga Alexandrium minutum Measured by Accelerometry and Passive Acoustics

    PubMed Central

    Coquereau, Laura; Jolivet, Aurélie; Hégaret, Hélène; Chauvaud, Laurent

    2016-01-01

    Harmful algal blooms produced by toxic dinoflagellates have increased worldwide, impacting human health, the environment, and fisheries. Due to their potential sensitivity (e.g., environmental changes), bivalves through their valve movements can be monitored to detect harmful algal blooms. Methods that measure valve activity require bivalve-attached sensors and usually connected cables to data transfers, leading to stress animals and limit the use to sessile species. As a non-intrusive and continuously deployable tool, passive acoustics could be an effective approach to detecting harmful algal blooms in real time based on animal sound production. This study aimed to detect reaction changes in the valve movements of adult Pecten maximus exposed to the toxic dinoflagellate Alexandrium minutum using both accelerometry and passive acoustic methods. Scallops were experimentally exposed to three ecologically relevant concentrations of A. minutum for 2 hours. The number of each type of valve movement and their sound intensity, opening duration, and valve-opening amplitude were measured. Four behaviours were identified: closures, expulsion, displacement, and swimming. The response of P. maximus to A. minutum occurred rapidly at a high concentration. The valve activity of P. maximus was different when exposed to high concentrations (500 000 cells L-1) of A. minutum compared to the non-toxic dinoflagellate Heterocapsa triquetra; the number of valve movements increased, especially closure and expulsion, which were detected acoustically. Thus, this study demonstrates the potential for acoustics and sound production changes in the detection of harmful algal blooms. However, field trials and longer duration experiments are required to provide further evidence for the use of acoustics as a monitoring tool in the natural environment where several factors may interfere with valve behaviours. PMID:27508498

  9. Characterization of the Mantle Transcriptome of Yesso Scallop (Patinopecten yessoensis): Identification of Genes Potentially Involved in Biomineralization and Pigmentation

    PubMed Central

    Sun, Xiujun; Yang, Aiguo; Wu, Biao; Zhou, Liqing; Liu, Zhihong

    2015-01-01

    The Yesso scallop Patinopecten yessoensis is an economically important marine bivalve species in aquaculture and fishery in Asian countries. However, limited genomic resources are available for this scallop, which hampers investigations into molecular mechanisms underlying their unique biological characteristics, such as shell formation and pigmentation. Mantle is the special tissue of P. yessoensis that secretes biomineralization proteins inducing shell deposition as well as pigmentation on the shells. However, a current deficiency of transcriptome information limits insight into mechanisms of shell formation and pigmentation in this species. In this study, the transcriptome of the mantle of P. yessoensis was deeply sequenced and characterized using Illumina RNA-seq technology. A total of 86,521 unique transcripts are assembled from 55,884,122 reads that passed quality filters, and annotated, using Gene Ontology classification. A total of 259 pathways are identified in the mantle transcriptome, including the calcium signaling and melanogenesis pathways. A total of 237 unigenes that are homologous to 102 reported biomineralization genes are identified, and 121 unigenes that are homologous to 93 known proteins related to melanin biosynthesis are found. Twenty-three annotated unigenes, which are mainly homologous to calmodulin and related proteins, Ca2+/calmodulin-dependent protein kinase, adenylate/guanylate cyclase, and tyrosinase family are potentially involved in both biomineralization and melanin biosynthesis. It is suggested that these genes are probably not limited in function to induce shell deposition by calcium metabolism, but may also be involved in pigmentation of the shells of the scallop. This potentially supports the idea that there might be a link between calcium metabolism and melanin biosynthesis, which was previously found in vertebrates. The findings presented here will notably advance the understanding of the sophisticated processes of shell

  10. Reconstruction of seasonal temperature variability in the tropical Pacific Ocean from the shell of the scallop, Comptopallium radula

    NASA Astrophysics Data System (ADS)

    Thébault, Julien; Chauvaud, Laurent; Clavier, Jacques; Guarini, Jennifer; Dunbar, Robert B.; Fichez, Renaud; Mucciarone, David A.; Morize, Eric

    2007-02-01

    We investigated the oxygen isotope composition (δ 18O) of shell striae from juvenile Comptopallium radula (Mollusca; Pectinidae) specimens collected live in New Caledonia. Bottom-water temperature and salinity were monitored in-situ throughout the study period. External shell striae form with a 2-day periodicity in this scallop, making it possible to estimate the date of precipitation for each calcite sample collected along a growth transect. The oxygen isotope composition of shell calcite (δ 18O shell calcite) measured at almost weekly resolution on calcite accreted between August 2002 and July 2003 accurately tracks bottom-water temperatures. A new empirical paleotemperature equation for this scallop species relates temperature and δ 18O shell calcite: t(°C)=20.00(±0.61)-3.66(±0.39)×(δ18O-δ18O) The mean absolute accuracy of temperature estimated using this equation is 1.0 °C at temperatures between 20 and 30 °C. Uncertainties regarding the precise timing of CaCO 3 deposition and the actual variations in δ 18O water at our study sites probably contribute to this error. Comparison with a previously published empirical paleotemperature equation indicates that C. radula calcite is enriched in 18O by ˜0.7‰ relative to equilibrium. Given the direction of this offset and the lack of correlation between shell growth rate and δ 18O shell calcite, this disequilibrium is unlikely to be related to kinetic isotope effects. We suggest that this enrichment reflects (1) a relatively low pH in the scallop's marginal extrapallial fluid (EPF), (2) an isotopic signature of the EPF different from that of seawater, or (3) Rayleigh fractionation during the biocalcification process. Relative changes in δ 18O shell calcite reflect seawater temperature variability at this location and we suggest that the shell of C. radula may be useful as an archive of past seawater temperatures.

  11. The comparative proteomics analysis revealed the modulation of inducible nitric oxide on the immune response of scallop Chlamys farreri.

    PubMed

    Sun, Zhibin; Jiang, Qiufen; Wang, Lingling; Zhou, Zhi; Wang, Mengqiang; Yi, Qilin; Song, Linsheng

    2014-10-01

    Nitric oxide (NO) is an important gasotransmitter which plays a key role on the modulation of immune response in all vertebrates and invertebrates. In the present study, the modulation of inducible NO on immune response of scallop Chlamys farreri was investigated via proteomic analysis. Total proteins from hepatopancreas of scallops treated with lipopolysaccharide (LPS) and/or the inhibitor of vertebrate inducible NO synthase (S-methylisothiourea sulfate, SMT) for 12 h were analyzed via 2-D PAGE and ImageMaster 2D Platinum. There were 890, 1189 and 1046 protein spots detected in the groups treated by phosphate buffered saline (PBS), LPS and LPS+SMT, respectively, and 26 differentially expressed protein spots were identified among them. These proteins were annotated with binding or catalytic activity, and most of them were involved in metabolic or cellular processes. Some immune-related or antioxidant-related molecules such as single Ig IL-1-related receptor, guanine nucleotide-binding protein subunit beta-like protein and peroxiredoxin were identified, and the changes of their expression levels in LPS group were intensified significantly after adding SMT. The decreased expression level of tyrosinase and increased level of glutathione S-transferase 4 in LPS group were diametrically reversed by appending SMT. Moreover, interferon stimulated exonuclease gene 20-like protein and copper chaperone for superoxide dismutase were only induced by LPS+SMT stimulation but not by LPS stimulation. These data indicated that NO could modulate many immunity processes in scallop, such as NF-κB transactivation, cytoskeleton reorganization and other pivotal processes, and it was also involved in the energy metabolism, posttranslational modification, detoxification and redox balance during the immune response.

  12. Characterization of the mantle transcriptome of yesso scallop (Patinopecten yessoensis): identification of genes potentially involved in biomineralization and pigmentation.

    PubMed

    Sun, Xiujun; Yang, Aiguo; Wu, Biao; Zhou, Liqing; Liu, Zhihong

    2015-01-01

    The Yesso scallop Patinopecten yessoensis is an economically important marine bivalve species in aquaculture and fishery in Asian countries. However, limited genomic resources are available for this scallop, which hampers investigations into molecular mechanisms underlying their unique biological characteristics, such as shell formation and pigmentation. Mantle is the special tissue of P. yessoensis that secretes biomineralization proteins inducing shell deposition as well as pigmentation on the shells. However, a current deficiency of transcriptome information limits insight into mechanisms of shell formation and pigmentation in this species. In this study, the transcriptome of the mantle of P. yessoensis was deeply sequenced and characterized using Illumina RNA-seq technology. A total of 86,521 unique transcripts are assembled from 55,884,122 reads that passed quality filters, and annotated, using Gene Ontology classification. A total of 259 pathways are identified in the mantle transcriptome, including the calcium signaling and melanogenesis pathways. A total of 237 unigenes that are homologous to 102 reported biomineralization genes are identified, and 121 unigenes that are homologous to 93 known proteins related to melanin biosynthesis are found. Twenty-three annotated unigenes, which are mainly homologous to calmodulin and related proteins, Ca2+/calmodulin-dependent protein kinase, adenylate/guanylate cyclase, and tyrosinase family are potentially involved in both biomineralization and melanin biosynthesis. It is suggested that these genes are probably not limited in function to induce shell deposition by calcium metabolism, but may also be involved in pigmentation of the shells of the scallop. This potentially supports the idea that there might be a link between calcium metabolism and melanin biosynthesis, which was previously found in vertebrates. The findings presented here will notably advance the understanding of the sophisticated processes of shell

  13. First Report of Vibrio tubiashii Associated with a Massive Larval Mortality Event in a Commercial Hatchery of Scallop Argopecten purpuratus in Chile

    PubMed Central

    Rojas, Rodrigo; Miranda, Claudio D.; Santander, Javier; Romero, Jaime

    2016-01-01

    The VPAP30 strain was isolated as the highly predominant bacteria from an episode of massive larval mortality occurring in a commercial culture of the Chilean scallop Argopecten purpuratus. The main aims of this study were, to characterize and identify the pathogenic strain using biochemical and molecular methods to demonstrate its pathogenic activity on scallop larvae, to characterize its pathogenic properties and to describe the chronology of this pathology. The pathogenic strain was identified as Vibrio tubiashii based on its phenotypic properties and the sequence analysis of its 16S rRNA and housekeeping genes (ftsZ, gapA, gyrB, mreB, pyrH, recA, rpoA and topA). When triplicate cultures of healthy 10–day–old scallop larvae were challenged with 1 × 105 colony forming units (CFU) mL-1 of the VPAP30 strain, percentages of larval survival of 78.87 ± 3.33%, 34.32 ± 4.94%, and 0% were observed at 12, 24, and 36 h, respectively; whereas uninfected larval cultures showed survival rates of 97.4 ± 1.24% after of 48 h. Clinical symptoms exhibited by the scallop larvae infected with the VPAP30 strain include the accumulation of bacteria around the scallop larvae, velum disruption and necrosis of digestive gland. The 50% lethal dose (LD50) of VPAP30 strain at 24 and 48 h was 1.3 × 104 and 1.2 × 103 CFU mL-1, respectively. The invasive pathogenic activity of the VPAP30 strain was investigated with staining of the bacterial pathogen with 5-DTAF and analyzing bacterial invasion using epifluorescence, and a complete bacterial dissemination inside the larvae at 24 h post-infection was observed. When scallop larvae were inoculated with cell-free extracellular products (ECPs) of VPAP30, the larval survival rate was 59.5 ± 1.66%, significantly (P < 0.001) lower than the control group (97.4 ± 1.20%) whereas larvae treated with heat-treated ECPs exhibited a survival rate of 61.6 ± 1.84% after 48 h of exposure. This is the first report of the isolation of V. tubiashii

  14. A mixture of cod and scallop protein reduces adiposity and improves glucose tolerance in high-fat fed male C57BL/6J mice.

    PubMed

    Tastesen, Hanne Sørup; Rønnevik, Alexander Krokedal; Borkowski, Kamil; Madsen, Lise; Kristiansen, Karsten; Liaset, Bjørn

    2014-01-01

    Low-protein and high-protein diets regulate energy metabolism in animals and humans. To evaluate whether different dietary protein sources modulate energy balance when ingested at average levels obesity-prone male C57BL/6J mice were pair-fed high-fat diets (67 energy percent fat, 18 energy percent sucrose and 15 energy percent protein) with either casein, chicken filet or a mixture of cod and scallop (1:1 on amino acid content) as protein sources. At equal energy intake, casein and cod/scallop fed mice had lower feed efficiency than chicken fed mice, which translated into reduced adipose tissue masses after seven weeks of feeding. Chicken fed mice had elevated hepatic triglyceride relative to casein and cod/scallop fed mice and elevated 4 h fasted plasma cholesterol concentrations compared to low-fat and casein fed mice. In casein fed mice the reduced adiposity was likely related to the observed three percent lower apparent fat digestibility compared to low-fat, chicken and cod/scallop fed mice. After six weeks of feeding an oral glucose tolerance test revealed that despite their lean phenotype, casein fed mice had reduced glucose tolerance compared to low-fat, chicken and cod/scallop fed mice. In a separate set of mice, effects on metabolism were evaluated by indirect calorimetry before onset of diet-induced obesity. Spontaneous locomotor activity decreased in casein and chicken fed mice when shifting from low-fat to high-fat diets, but cod/scallop feeding tended (P = 0.06) to attenuate this decrease. Moreover, at this shift, energy expenditure decreased in all groups, but was decreased to a greater extent in casein fed than in cod/scallop fed mice, indicating that protein sources regulated energy expenditure differently. In conclusion, protein from different sources modulates energy balance in C57BL/6J mice when given at normal levels. Ingestion of a cod/scallop-mixture prevented diet-induced obesity compared to intake of chicken filet and preserved glucose

  15. First Report of Vibrio tubiashii Associated with a Massive Larval Mortality Event in a Commercial Hatchery of Scallop Argopecten purpuratus in Chile.

    PubMed

    Rojas, Rodrigo; Miranda, Claudio D; Santander, Javier; Romero, Jaime

    2016-01-01

    The VPAP30 strain was isolated as the highly predominant bacteria from an episode of massive larval mortality occurring in a commercial culture of the Chilean scallop Argopecten purpuratus. The main aims of this study were, to characterize and identify the pathogenic strain using biochemical and molecular methods to demonstrate its pathogenic activity on scallop larvae, to characterize its pathogenic properties and to describe the chronology of this pathology. The pathogenic strain was identified as Vibrio tubiashii based on its phenotypic properties and the sequence analysis of its 16S rRNA and housekeeping genes (ftsZ, gapA, gyrB, mreB, pyrH, recA, rpoA and topA). When triplicate cultures of healthy 10-day-old scallop larvae were challenged with 1 × 10(5) colony forming units (CFU) mL(-1) of the VPAP30 strain, percentages of larval survival of 78.87 ± 3.33%, 34.32 ± 4.94%, and 0% were observed at 12, 24, and 36 h, respectively; whereas uninfected larval cultures showed survival rates of 97.4 ± 1.24% after of 48 h. Clinical symptoms exhibited by the scallop larvae infected with the VPAP30 strain include the accumulation of bacteria around the scallop larvae, velum disruption and necrosis of digestive gland. The 50% lethal dose (LD50) of VPAP30 strain at 24 and 48 h was 1.3 × 10(4) and 1.2 × 10(3) CFU mL(-1), respectively. The invasive pathogenic activity of the VPAP30 strain was investigated with staining of the bacterial pathogen with 5-DTAF and analyzing bacterial invasion using epifluorescence, and a complete bacterial dissemination inside the larvae at 24 h post-infection was observed. When scallop larvae were inoculated with cell-free extracellular products (ECPs) of VPAP30, the larval survival rate was 59.5 ± 1.66%, significantly (P < 0.001) lower than the control group (97.4 ± 1.20%) whereas larvae treated with heat-treated ECPs exhibited a survival rate of 61.6 ± 1.84% after 48 h of exposure. This is the first report of the isolation of V

  16. A Mixture of Cod and Scallop Protein Reduces Adiposity and Improves Glucose Tolerance in High-Fat Fed Male C57BL/6J Mice

    PubMed Central

    Tastesen, Hanne Sørup; Rønnevik, Alexander Krokedal; Borkowski, Kamil; Madsen, Lise; Kristiansen, Karsten; Liaset, Bjørn

    2014-01-01

    Low-protein and high-protein diets regulate energy metabolism in animals and humans. To evaluate whether different dietary protein sources modulate energy balance when ingested at average levels obesity-prone male C57BL/6J mice were pair-fed high-fat diets (67 energy percent fat, 18 energy percent sucrose and 15 energy percent protein) with either casein, chicken filet or a mixture of cod and scallop (1∶1 on amino acid content) as protein sources. At equal energy intake, casein and cod/scallop fed mice had lower feed efficiency than chicken fed mice, which translated into reduced adipose tissue masses after seven weeks of feeding. Chicken fed mice had elevated hepatic triglyceride relative to casein and cod/scallop fed mice and elevated 4 h fasted plasma cholesterol concentrations compared to low-fat and casein fed mice. In casein fed mice the reduced adiposity was likely related to the observed three percent lower apparent fat digestibility compared to low-fat, chicken and cod/scallop fed mice. After six weeks of feeding an oral glucose tolerance test revealed that despite their lean phenotype, casein fed mice had reduced glucose tolerance compared to low-fat, chicken and cod/scallop fed mice. In a separate set of mice, effects on metabolism were evaluated by indirect calorimetry before onset of diet-induced obesity. Spontaneous locomotor activity decreased in casein and chicken fed mice when shifting from low-fat to high-fat diets, but cod/scallop feeding tended (P = 0.06) to attenuate this decrease. Moreover, at this shift, energy expenditure decreased in all groups, but was decreased to a greater extent in casein fed than in cod/scallop fed mice, indicating that protein sources regulated energy expenditure differently. In conclusion, protein from different sources modulates energy balance in C57BL/6J mice when given at normal levels. Ingestion of a cod/scallop-mixture prevented diet-induced obesity compared to intake of chicken filet and preserved glucose

  17. Demographic Processes Underlying Subtle Patterns of Population Structure in the Scalloped Hammerhead Shark, Sphyrna lewini

    PubMed Central

    Nance, Holly A.; Klimley, Peter; Galván-Magaña, Felipe; Martínez-Ortíz, Jimmy; Marko, Peter B.

    2011-01-01

    Genetic diversity (θ), effective population size (Ne), and contemporary levels of gene flow are important parameters to estimate for species of conservation concern, such as the globally endangered scalloped hammerhead shark, Sphyrna lewini. Therefore, we have reconstructed the demographic history of S. lewini across its Eastern Pacific (EP) range by applying classical and coalescent population genetic methods to a combination of 15 microsatellite loci and mtDNA control region sequences. In addition to significant population genetic structure and isolation-by-distance among seven coastal sites between central Mexico and Ecuador, the analyses revealed that all populations have experienced a bottleneck and that all current values of θ are at least an order of magnitude smaller than ancestral θ, indicating large decreases in Ne (θ = 4Neμ), where μ is the mutation rate. Application of the isolation-with-migration (IM) model showed modest but significant genetic connectivity between most sampled sites (point estimates of Nm = 0.1–16.7), with divergence times (t) among all populations significantly greater than zero. Using a conservative (i.e., slow) fossil-based taxon-specific phylogenetic calibration for mtDNA mutation rates, posterior probability distributions (PPDs) for the onset of the decline in Ne predate modern fishing in this region. The cause of decline over the last several thousand years is unknown but is highly atypical as a post-glacial demographic history. Regardless of the cause, our data and analyses suggest that S. lewini was far more abundant throughout the EP in the past than at present. PMID:21789171

  18. Differential Regulation of Cyclin E by Yorkie-Scalloped Signaling in Organ Development

    PubMed Central

    Shu, Zhiqiang; Deng, Wu-Min

    2017-01-01

    Tissue integrity and homeostasis are accomplished through strict spatial and temporal regulation of cell growth and proliferation during development. Various signaling pathways have emerged as major growth regulators across metazoans; yet, how differential growth within a tissue is spatiotemporally coordinated remains largely unclear. Here, we report a role of a growth modulator Yorkie (Yki), the Drosophila homolog of Yes-associated protein (YAP), that differentially regulates its targets in Drosophila wing imaginal discs; whereby Yki interacts with its transcriptional partner, Scalloped (Sd), the homolog of the TEAD/TEF family transcription factor in mammals, to control an essential cell cycle regulator Cyclin E (CycE). Interestingly, when Yki was coexpressed with Fizzy-related (Fzr), a Drosophila endocycle inducer and homolog of Cdh1 in mammals, surrounding hinge cells displayed larger nuclear size than distal pouch cells. The observed size difference is attributable to differential regulation of CycE, a target of Yki and Sd, the latter of which can directly bind to CycE regulatory sequences, and is expressed only in the pouch region of the wing disc starting from the late second-instar larval stage. During earlier stages of larval development, when Sd expression was not detected in the wing disc, coexpression of Fzr and Yki did not cause size differences between cells along the proximal–distal axis of the disc. We show that ectopic CycE promoted cell proliferation and apoptosis, and inhibited transcriptional activity of Yki targets. These findings suggest that spatiotemporal expression of transcription factor Sd induces differential growth regulation by Yki during wing disc development, highlighting coordination between Yki and CycE to control growth and maintain homeostasis. PMID:28143945

  19. Molecular cloning and characterization of SoxB2 gene from Zhikong scallop Chlamys farreri

    NASA Astrophysics Data System (ADS)

    He, Yan; Bao, Zhenmin; Guo, Huihui; Zhang, Yueyue; Zhang, Lingling; Wang, Shi; Hu, Jingjie; Hu, Xiaoli

    2013-11-01

    The Sox proteins play critical roles during the development of animals, including sex determination and central nervous system development. In this study, the SoxB2 gene was cloned from a mollusk, the Zhikong scallop ( Chlamys farreri), and characterized with respect to phylogeny and tissue distribution. The full-length cDNA and genomic DNA sequences of C. farreri SoxB2 ( Cf SoxB2) were obtained by rapid amplification of cDNA ends and genome walking, respectively, using a partial cDNA fragment from the highly conserved DNA-binding domain, i.e., the High Mobility Group (HMG) box. The full-length cDNA sequence of Cf SoxB2 was 2 048 bp and encoded 268 amino acids protein. The genomic sequence was 5 551 bp in length with only one exon. Several conserved elements, such as the TATA-box, GC-box, CAAT-box, GATA-box, and Sox/sry-sex/testis-determining and related HMG box factors, were found in the promoter region. Furthermore, real-time quantitative reverse transcription PCR assays were carried out to assess the mRNA expression of Cf SoxB 2 in different tissues. SoxB2 was highly expressed in the mantle, moderately in the digestive gland and gill, and weakly expressed in the gonad, kidney and adductor muscle. In male and female gonads at different developmental stages of reproduction, the expression levels of Cf SoxB2 were similar. Considering the specific expression and roles of SoxB 2 in other animals, in particular vertebrates, and the fact that there are many pallial nerves in the mantle, cerebral ganglia in the digestive gland and gill nerves in gill, we propose a possible essential role in nervous tissue function for Sox B 2 in C. farreri.

  20. Energy vs. essential fatty acids: what do scallop larvae (Argopecten purpuratus) need most?

    PubMed

    Nevejan, Nancy; Saez, Iris; Gajardo, Gonzalo; Sorgeloos, Patrick

    2003-04-01

    Larvae of the Chilean-Peruvian scallop Argopecten purpuratus were fed a Dunaliella tertiolecta diet (Dun-diet) supplemented with lipid emulsions, rich in 20:5n-3 (EmEPA), 22:6n-3 (EmDHA) or in saturated fatty acids (EmCOCO). A mixed algal diet of Isochrysis galbana (T-iso) and Chaetoceros neogracile served as a positive control (St-diet). Lipid supplementation to the Dun-diet improved the larval growth and increased the percentage of eyed larvae significantly, compared to the non-supplemented Dun-diet because of the extra energy supplied and not because of its fatty acid composition. No significant differences were observed between supplementation with EmEPA, EmDHA or EmCOCO. A mixture of 20% EmEPA+20% EmDHA (40% EmHUFA) was more efficient in raising the total lipid content in larvae than 40% EmCOCO. Both emulsions increased the triacylglycerol content in larvae compared to the non-supplemented Dun-diet. The best result, however, was obtained with the St-diet, probably because of a more suitable 18:2n-6/18:3n-3 ratio and a higher level of arachidonic acid. A positive relationship between the 18:2n-6/18:3n-3 ratio and the larval performance was found. No significant difference was observed in post-settlement larval size or percentage of metamorphosed larvae between the St-diet and the St-diet supplemented with 20% EmHUFA or 20% EmCOCO. The metamorphosed larvae had a constant DHA/EPA ratio of 3.7, independent from the diet, which suggested a metabolic control of the two fatty acids and a species-dependency of the ratio.

  1. Ultrastructure of the abdominal sense organ of the scallop Mizuchopecten yessoensis (Jay).

    PubMed

    Zhadan, Peter M; Sizov, Alexander V; Dautov, Salim S

    2004-12-01

    The sensory epithelium of the abdominal sense organ (ASO) of the scallop Mizuchopecten yessoensis is composed of three cell types, sensory cells, mucous cells, and multiciliated cells. Sensory cells bear a single long (up to 250 microm) cilium surrounded by an inner ring of nine modified microvilli and an outer ring of ordinary microvilli paired with modified microvilli. Sensory cells make up about 90% of the total number of cells in the sensory epithelium. Mucous cells, which are much wider than sensory cells, bear only ordinary microvilli on their apical surface. Rare multiciliated cells with short (4-6 microm) cilia are scattered in the periphery of the sensory epithelium sheet. All hairs, cilium, and microvilli of each sensory cell are interconnected by a fibrous network. Nine modified microvilli of a single cell are interconnected by prominent laterally running fibrous links. Membrane-associated electron-dense material of modified microvilli is connected to the ciliary membrane-associated electron-dense material by fine string-like links. These links mechanically bridge the space between the cilium and modified microvilli, as do mechanical links, described for the stereocilia and kinocilium of vertebrate vestibular and cochlear hair cells. The proximal portion of a sensory cilium is about 100 microm long and has a typical 9 x 2+2 axoneme arrangement. The distal portion of a cilium is approximately 2 times thinner than the proximal one and is filled with homogeneous electron-dense material. Along the distal portion, diffuse material associated with the external surface of the membrane is found. The rigidity of distal portion of a cilium is much less than that of the proximal one.

  2. Demographic processes underlying subtle patterns of population structure in the scalloped hammerhead shark, Sphyrna lewini.

    PubMed

    Nance, Holly A; Klimley, Peter; Galván-Magaña, Felipe; Martínez-Ortíz, Jimmy; Marko, Peter B

    2011-01-01

    Genetic diversity (θ), effective population size (N(e)), and contemporary levels of gene flow are important parameters to estimate for species of conservation concern, such as the globally endangered scalloped hammerhead shark, Sphyrna lewini. Therefore, we have reconstructed the demographic history of S. lewini across its Eastern Pacific (EP) range by applying classical and coalescent population genetic methods to a combination of 15 microsatellite loci and mtDNA control region sequences. In addition to significant population genetic structure and isolation-by-distance among seven coastal sites between central Mexico and Ecuador, the analyses revealed that all populations have experienced a bottleneck and that all current values of θ are at least an order of magnitude smaller than ancestral θ, indicating large decreases in N(e) (θ = 4N(e)μ), where μ is the mutation rate. Application of the isolation-with-migration (IM) model showed modest but significant genetic connectivity between most sampled sites (point estimates of Nm = 0.1-16.7), with divergence times (t) among all populations significantly greater than zero. Using a conservative (i.e., slow) fossil-based taxon-specific phylogenetic calibration for mtDNA mutation rates, posterior probability distributions (PPDs) for the onset of the decline in N(e) predate modern fishing in this region. The cause of decline over the last several thousand years is unknown but is highly atypical as a post-glacial demographic history. Regardless of the cause, our data and analyses suggest that S. lewini was far more abundant throughout the EP in the past than at present.

  3. Assessing PAHs pollution in Qingdao coastal area (China) by the combination of chemical and biochemical responses in scallops, Chlamys farreri.

    PubMed

    Jin, Qian; Pan, Luqing; Liu, Dong; Hu, Fengxiao; Xiu, Meng

    2014-12-15

    The PAHs concentrations in seawater and tissues from the scallop Chlamys farreri were detected in three sites in Qingdao, China in 2011. The PAHs concentrations in seawater ranged from 25.32 ng/L to 314.62 ng/L. There were significant differences (p<0.05) between the residual levels among scallop tissues. The highest concentrations of PAHs in seawater and tissues were found in S2. The ethoxyresorufin-O-deethylase (EROD) activity of the digestive gland and the malondialdehyde (MDA) contents of the digestive gland and gill were sensitive to PAHs (p<0.05). This study integrated the PAHs concentrations in seawater, residual levels, the variation of biochemical response and the correlation coefficient analysis, and concluded that Qingdao is a medium PAH-contaminated area on a global scale. The highest PAHs were accumulated in the digestive gland followed by the gill, soft tissue and adductor muscle. The EROD activity of the digestive gland and the MDA contents of the digestive gland and gill could be applied to assess the PAHs pollution status in Qingdao, China.

  4. Bioconversion of (13)C-labeled microalgal phytosterols to cholesterol by the Northern Bay scallop, Argopecten irradians irradians.

    PubMed

    Giner, José-Luis; Zhao, Hui; Dixon, Mark S; Wikfors, Gary H

    2016-02-01

    Bivalve mollusks lack de novo cholesterol biosynthesis capabilities and therefore rely upon dietary sources of sterols for rapid growth. Microalgae that constitute the main source of nutrition for suspension-feeding bivalves contain a diverse array of phytosterols, in most cases lacking cholesterol. Rapid growth of bivalves on microalgal diets with no cholesterol implies that some phytosterols can satisfy the dietary requirement for cholesterol through metabolic conversion to cholesterol, but such metabolic pathways have not been rigorously demonstrated. In the present study, stable isotope-labeled phytosterols were used to supplement a unialgal diet of Rhodomonas sp. and their biological transformation to cholesterol within scallop tissues was determined using (13)C-NMR spectroscopy. Scallops efficiently dealkylated ∆(5) C29 (24-ethyl) sterols to cholesterol, and the only C28 sterol that was dealkylated efficiently possessed the 24(28)-double bond. Non-metabolized dietary phytosterols accumulated in the soft tissues. Observed formation of ∆(5,7) sterols (provitamin D) from ∆(5) sterols may represent initiation of steroid hormone (possibly ecdysone) biosynthesis. These findings provide a key component necessary for formulation of nutritionally complete microalgal diets for hatchery production of seed for molluscan aquaculture.

  5. Inheritance pattern of microsatellite loci and their use for kinship analysis in the Japanese scallop Patinopecten yessoensis

    NASA Astrophysics Data System (ADS)

    Xu, Kefeng; Li, Qi

    2009-06-01

    The inheritance mode of seven microsatellite markers was investigated in Patinopecten yessoensis larvae from four controlled crosses, and the feasibility of using these markers for kinship estimation was also examined. All the seven microsatellite loci were compatible with Mendelian inheritance. Neither sex-linked barriers to transmission nor major barriers to fertilization between gametes from the parents were evident. Two of the seven loci showed the presence of null alleles in two families, suggesting the need to conduct comprehensive species-specific inheritance studies for microsatellite loci used in population genetic studies. However, even if the null allele heterozygotes were considered as homozygotes in the calculation of genetic distance, offspring from four families were all unambiguously discriminated in the neighbor-joining dendrogram. This result indicates that the microsatellite markers used may be capable of discriminating between related and unrelated scallop larvae in the absence of pedigree information, and of investigating the effective number of parents contributing to the hatchery population of the Japanese scallop.

  6. The Vestigial and Scalloped proteins act together to directly regulate wing-specific gene expression in Drosophila.

    PubMed

    Halder, G; Polaczyk, P; Kraus, M E; Hudson, A; Kim, J; Laughon, A; Carroll, S

    1998-12-15

    A small number of major regulatory (selector) genes have been identified in animals that control the development of particular organs or complex structures. In Drosophila, the vestigial gene is required for wing formation and is able to induce wing-like outgrowths on other structures. However, the molecular function of the nuclear Vestigial protein, which bears no informative similarities to other proteins, was unknown. Here, we show that Vestigial requires the function of the Scalloped protein, a member of the TEA family of transcriptional regulators, to directly activate the expression of genes involved in wing morphogenesis. Genetic and molecular analyses reveal that Vestigial regulates wing identity by forming a complex with the Scalloped protein that binds sequence specifically to essential sites in wing-specific enhancers. These enhancers also require the direct inputs of signaling pathways, and the response of an enhancer can be switched to another pathway through changes in signal-transducer binding sites. Combinatorial regulation by selector proteins and signal transducers is likely to be a general feature of the tissue-specific control of gene expression during organogenesis.

  7. Genome Sequence of Vibrio VPAP30, Isolated from an Episode of Massive Mortality of Reared Larvae of the Scallop Argopecten purpuratus

    PubMed Central

    Rojas, Rodrigo; Miranda, Claudio D.; Romero, Jaime; Asenjo, Freddy; Valderrama, Katherinne; Segovia, Cristopher

    2015-01-01

    We report here the 5.167-Mbp draft genome sequence of Vibrio VPAP30, isolated from an Argopecten purpuratus larval culture. Vibrio VPAP30 is the etiological agent of a vibriosis outbreak causing a complete collapse of a larval culture of the scallop A. purpuratus, which occurred in a commercial hatchery in Chile. PMID:26159530

  8. Pathogenicity of a highly exopolysaccharide-producing Halomonas strain causing epizootics in larval cultures of the Chilean scallop Argopecten purpuratus (Lamarck, 1819).

    PubMed

    Rojas, Rodrigo; Miranda, Claudio D; Amaro, Ana María

    2009-01-01

    Mass mortalities of larval cultures of Chilean scallop Argopecten purpuratus have repeatedly occurred in northern Chile, characterized by larval agglutination and accumulation in the bottom of rearing tanks. The exopolysaccharide slime (EPS) producing CAM2 strain was isolated as the primary organism from moribund larvae in a pathogenic outbreak occurring in a commercial hatchery producing larvae of the Chilean scallop Argopecten purpuratus located in Bahía Inglesa, Chile. The CAM2 strain was characterized biochemically and was identified by polymerase chain reaction amplification of 16S rRNA as Halomonas sp. (Accession number DQ885389.1). Healthy 7-day-old scallop larvae cultures were experimentally infected for a 48-h period with an overnight culture of the CAM2 strain at a final concentration of ca. 10(5) cells per milliliter, and the mortality and vital condition of larvae were determined by optical and scanning electron microscopy (SEM) to describe the chronology of the disease. Pathogenic action of the CAM2 strain was clearly evidenced by SEM analysis, showing a high ability to adhere and detach larvae velum cells by using its "slimy" EPS, producing agglutination, loss of motility, and a posterior sinking of scallop larvae. After 48 h, a dense bacterial slime on the shell surface was observed, producing high percentages of larval agglutination (63.28 +/- 7.87%) and mortality (45.03 +/- 4.32%) that were significantly (P < 0.05) higher than those of the unchallenged control cultures, which exhibited only 3.20 +/- 1.40% dead larvae and no larval agglutination. Furthermore, the CAM2 strain exhibited a high ability to adhere to fiberglass pieces of tanks used for scallop larvae rearing (1.64 x 10(5) cells adhered per square millimeters at 24 h postinoculation), making it very difficult to eradicate it from the culture systems. This is the first report of a pathogenic activity on scallop larvae of Halomonas species, and it prompts the necessity of an appraisal on

  9. Organohalogen compounds and their metabolites in the blood of Japanese amberjack (Seriola quinqueradiata) and scalloped hammerhead shark (Sphyrna lewini) from Japanese coastal waters.

    PubMed

    Nomiyama, Kei; Uchiyama, Yukiko; Horiuchi, Satoko; Eguchi, Akifumi; Mizukawa, Hazuki; Hirata, Sawako Horai; Shinohara, Ryota; Tanabe, Shinsuke

    2011-10-01

    Information on accumulation of polychlorinated biphenyl metabolites (OH-PCBs) and hydroxylated polybrominated diphenyl ethers (OH-PBDEs) in the blood of marine fish is limited. The present study, we determined the residue levels and patterns of PCBs, OH-PCBs, PBDEs, OH-PBDEs and methoxylated PBDEs (MeO-PBDEs) in the blood collected from scalloped hammerhead shark (Sphyrna lewini) and Japanese amberjack (Seriola quinqueradiata), species of predatory fish at Japanese coastal waters. The predominant homologues found in Japanese amberjacks were mono- and di-chlorinated OH-PCBs, and scalloped hammerhead sharks were octa-chlorinated OH-PCBs. The predominant OH-PCB isomers were lower-chlorinated OH-PCBs such as 6OH-CB2 and 2'OH-CB9 in Japanese amberjacks. This result suggests that exposure of Japanese amberjacks to lower-chlorinated OH-PCBs might be from the ambient aquatic environment. In scalloped hammerhead sharks, 4,4'diOH-CB202, 4OH-CB201 and 4OH-CB146 were the predominant isomers accounting for approximately 60% of the total OH-PCBs. The predominant MeO-PBDE isomers were 6MeO-BDE47 followed by 2'MeO-BDE68 in both species. As for OH-PBDE isomers, 6OH-BDE47 was predominant followed by 2'OH-BDE68 in Japanese amberjacks and scalloped hammerhead sharks. Residue levels of ΣMeO-PBDEs and ΣOH-PBDEs showed a significant positive correlation (p=0.029). This result suggests that MeO-PBDEs and OH-PBDEs share a common source or a metabolic pathway in fishes. Characteristic differences found in the profiles of OH-PCBs and OH-PBDEs in Japanese amberjack and scalloped hammerhead shark show the need for further studies on the differences in exposure profiles, metabolic capacities and toxic effects in fish.

  10. Inactivation of Avian Influenza Virus, Newcastle Disease Virus and Goose Parvovirus Using Solution of Nano-Sized Scallop Shell Powder

    PubMed Central

    THAMMAKARN, Chanathip; SATOH, Keisuke; SUGURO, Atsushi; HAKIM, Hakimullah; RUENPHET, Sakchai; TAKEHARA, Kazuaki

    2014-01-01

    ABSTRACT Scallop shell powder produced by calcination process − the average diameter of the powder particles being 20 µm (SSP) − was further ground into nano-sized particles, with average diameter of 500 nm, here designated CaO-Nano. Solution of CaO-Nano could inactivate avian influenza virus within 5 sec, whereas the solution of SSP could not even after 1 hr incubation. CaO-Nano solution could also inactivate Newcastle disease virus and goose parvovirus within 5 sec and 30 sec, respectively. The virus-inactivating capacity (neutralizing index: NI>3) of the solution was not reduced by the presence of 20% fetal bovine serum. CaO-Nano solution seems to be a good candidate of materials for enhancement of biosecurity in farms. PMID:24871643

  11. Inactivation of avian influenza virus, newcastle disease virus and goose parvovirus using solution of nano-sized scallop shell powder.

    PubMed

    Thammakarn, Chanathip; Satoh, Keisuke; Suguro, Atsushi; Hakim, Hakimullah; Ruenphet, Sakchai; Takehara, Kazuaki

    2014-09-01

    Scallop shell powder produced by calcination process - the average diameter of the powder particles being 20 µm (SSP) - was further ground into nano-sized particles, with average diameter of 500 nm, here designated CaO-Nano. Solution of CaO-Nano could inactivate avian influenza virus within 5 sec, whereas the solution of SSP could not even after 1 hr incubation. CaO-Nano solution could also inactivate Newcastle disease virus and goose parvovirus within 5 sec and 30 sec, respectively. The virus-inactivating capacity (neutralizing index: NI>3) of the solution was not reduced by the presence of 20% fetal bovine serum. CaO-Nano solution seems to be a good candidate of materials for enhancement of biosecurity in farms.

  12. Vestigial and scalloped in the ladybird beetle: a conserved function in wing development and a novel function in pupal ecdysis.

    PubMed

    Ohde, T; Masumoto, M; Morita-Miwa, M; Matsuura, H; Yoshioka, H; Yaginuma, T; Niimi, T

    2009-10-01

    In Drosophila melanogaster, Vestigial (Vg) and Scalloped (Sd) form a transcription factor complex and play a crucial role in wing development. To extend our knowledge of insect wing formation, we isolated vg and sd homologues from two ladybird beetle species, Henosepilachna vigintioctopunctata and Harmonia axyridis. Although the ladybird beetle vg homologues had only low homology with D. melanogaster vg, ectopic expression of H. vigintioctopunctata vg induced wing-like tissues in antennae and legs of D. melanogaster. Subsequent larval RNA interference (RNAi) analysis in H. vigintioctopunctata demonstrated conserved functions of vg and sd in wing development, and an unexpected novel function of sd in pupal ecdysis. Furthermore, our results can be applied to the production of a flightless ladybird beetle for biological control purposes using larval RNAi.

  13. Fusarium solani fungal infection of the lateral line canal system in captive scalloped hammerhead sharks (Sphyrna lewini) in Hawaii.

    PubMed

    Crow, G L; Brock, J A; Kaiser, S

    1995-10-01

    Two of five scalloped hammerhead sharks (Sphyrna lewini) captured May 1987 in Hawaii (USA) developed granulomatous exudative mycotic dermatitis localized in the lateral line canal system. The lesion initially was noted in the cephalic canals, but over a period of months extended into the lateral canal. Fusarium solani and Vibrio spp. were isolated from the canal exudate of both sharks. Bacterial colonies were not observed in the canal walls or surrounding tissues. Fusarium solani infection resulted in a chronic physical and behavioral deterioration of the two sharks; one shark was euthanized in September 1988 and the other in July 1989. This is the first report of Fusarium solani infection in the lateral line canal system and the third account in hammerhead sharks.

  14. Sensitivity towards elevated pCO2 in great scallop (Pecten maximus Lamarck) embryos and fed larvae

    NASA Astrophysics Data System (ADS)

    Andersen, Sissel; Grefsrud, Ellen S.; Harboe, Torstein

    2017-02-01

    The increasing amount of dissolved anthropogenic CO2 has caused a drop in pH values in the open ocean known as ocean acidification. This change in seawater carbonate chemistry has been shown to have a negative effect on a number of marine organisms. Early life stages are the most vulnerable, and especially the organisms that produce calcified structures in the phylum Mollusca. Few studies have looked at effects on scallops, and this is the first study presented including fed larvae of the great scallop (Pecten maximus) followed until day 14 post-fertilization. Fertilized eggs from unexposed parents were exposed to three levels of pCO2 using four replicate units: 465 (ambient), 768 and 1294 µatm, corresponding to pHNIST of 7.94, 7.75 (-0.19 units) and 7.54 (-0.40 units), respectively. All of the observed parameters were negatively affected by elevated pCO2: survival, larval development, shell growth and normal shell development. The latter was observed to be affected only 2 days after fertilization. Negative effects on the fed larvae at day 7 were similar to what was shown earlier for unfed P. maximus larvae. Growth rate in the group at 768 µatm seemed to decline after day 7, indicating that the ability to overcome the environmental change at moderately elevated pCO2 was lost over time. The present study shows that food availability does not decrease the sensitivity to elevated pCO2 in P. maximus larvae. Unless genetic adaptation and acclimatization counteract the negative effects of long term elevated pCO2, recruitment in populations of P. maximus will most likely be negatively affected by the projected drop of 0.06-0.32 units in pH within year 2100.

  15. Effects of free oxygen radicals on Ca2+ release mechanisms in the sarcoplasmic reticulum of scallop (Pecten jacobaeus) adductor muscle.

    PubMed

    Burlando, B; Viarengo, A; Pertica, M; Ponzano, E; Orunesu, M

    1997-08-01

    In vitro oxyradical effects on SR Ca2+ regulation were studied by using a SR-containing cell-free preparation from scallop (Pecten jacobaeus) adductor muscle. Ca2+ variations were fluorimetrically detected after incubation with Fluo-3 in the presence of ATP. Exposure to Fe3+/ascorbate produced dose-dependent Ca2+ release from SR vesicles, eventually leading to massive Ca2+ loss. Exposure to hypoxanthine/xanthine oxidase also caused Ca2+ release but at a much slower rate. Pre-incubations with catalase or with the hydroxyl radical scavenger KMBA led to a significant decrease in the Fe3+/ascorbate-induced Ca2+ release rate and to a delay of massive Ca2+ loss. Pre-incubations with GSH or DTT strongly reduced the Ca2+ release caused by Fe3+/ascorbate and, moreover, they prevented massive Ca2+ loss from SR vesicles. Addition of GSH or DTT after Fe3+/ascorbate promptly reduced the Ca2+ release rate and delayed massive Ca2+ release. Pre-incubation with the SR Ca2+ channel blocker ruthenium red strongly reduced the Ca2+ release caused by Fe3+/ascorbate, and also prevented massive Ca2+ loss. In the presence of ruthenium red, Fe3+/ascorbate treatments followed by Ca2+ addition revealed that Ca2+ uptake inhibition was slower than Ca2+ release. Taken together, data showed that free radicals and, in particular, hydroxyl radicals, affected the scallop SR Ca2+ regulation. This mainly occurred through Ca2+ channel opening, most likely triggered by sulfhydryl oxidation, which eventually led to massive Ca2+ release from SR vesicles. The demonstration of a specific effect of oxyradicals on SR Ca2+ channels is in line with their possible involvement in cell signaling.

  16. Molecular cloning, expression, purification and characterization of vitellogenin in scallop Patinopecten yessoensis with special emphasis on its antibacterial activity.

    PubMed

    Wu, Biao; Liu, Zhihong; Zhou, Liqing; Ji, Guangdong; Yang, Aiguo

    2015-04-01

    Vitellogenin (Vg), the major precursor of the egg-yolk proteins, has been found to play an immune role in fish and protochordate amphioxus, however, no study on the immune function of Vg in invertebrates has ever been studied before. In this study, the complete cDNA of Vg was identified from the scallop Patinopecten yessoensis (termed PyVg). The cDNA contained an open reading frame (ORF) of 6888 bp, encoding a polypeptide of 2295 amino acid protein, which had an N-terminal signal peptide followed by the mature Vg. The mature Vg had the domains Vitellogenin_N, domain of unknown function 1943 (DUF1943) and von Willebrand factor type D domain (VWD) as well as the consensus cleavage site (R-X-R/K-R) and conserved motif (KTIGNAG). Tissue distribution assay revealed that PyVg transcripts were predominantly present in the ovary and hepatopancreas, and its expression profile in ovary well reflected the annual cycle of vitellogenesis. Interestingly, bacterial challenge caused a significant change in PyVg expression, hinting an involvement of PyVg in the acute phase response in P. yessoensis. Consistently, recombinant DUF1943 and VWD domains both could interact with LTA and LPS on bacterial wall, and purified native PyVg displayed a broad-spectrum antibacterial activity against both Gram-negative (Escherichia coli and Vibrio anguillarum) and Gram-positive bacteria (Staphylococcus aureus). Overall, these data indicate that Vg is a pattern recognition molecule with bacterial growth-inhibiting activity in the scallop.

  17. Identification of Male Gametogenesis Expressed Genes from the Scallop Nodipecten subnodosus by Suppressive Subtraction Hybridization and Pyrosequencing

    PubMed Central

    Llera-Herrera, Raúl; García-Gasca, Alejandra; Abreu-Goodger, Cei; Huvet, Arnaud; Ibarra, Ana M.

    2013-01-01

    Despite the great advances in sequencing technologies, genomic and transcriptomic information for marine non-model species with ecological, evolutionary, and economical interest is still scarce. In this work we aimed to identify genes expressed during spermatogenesis in the functional hermaphrodite scallop Nodipecten subnodosus (Mollusca: Bivalvia: Pectinidae), with the purpose of obtaining a panel of genes that would allow for the study of differentially transcribed genes between diploid and triploid scallops in the context of meiotic arrest and reproductive sterility. Because our aim was to isolate genes involved in meiosis and other testis maturation-related processes, we generated suppressive subtractive hybridization libraries of testis vs. inactive gonad. We obtained 352 and 177 ESTs by clone sequencing, and using pyrosequencing (454-Roche) we maximized the identified ESTs to 34,276 reads. A total of 1,153 genes from the testis library had a blastx hit and GO annotation, including genes specific for meiosis, spermatogenesis, sex-differentiation, and transposable elements. Some of the identified meiosis genes function in chromosome pairing (scp2, scp3), recombination and DNA repair (dmc1, rad51, ccnb1ip1/hei10), and meiotic checkpoints (rad1, hormad1, dtl/cdt2). Gene expression analyses in different gametogenic stages in both sexual regions of the gonad of meiosis genes confirmed that the expression was specific or increased towards the maturing testis. Spermatogenesis genes included known testis-specific ones (kelch-10, shippo1, adad1), with some of these known to be associated to sterility. Sex differentiation genes included one of the most conserved genes at the bottom of the sex-determination cascade (dmrt1). Transcript from transposable elements, reverse transcriptase, and transposases in this library evidenced that transposition is an active process during spermatogenesis in N. subnodosus. In relation to the inactive library, we identified 833

  18. Technical report: Marine mammals study number 6. Movements of weanling and adult female sea otters in Prince William Sound, Alaska, after the t/v Exxon Valdez oil spill. Marine mammal study 6-12. Exxon Valdez oil spill state/federal natural resource damage assessment final report

    SciTech Connect

    Monnett, C.; Rotterman, L.M.

    1995-05-01

    Ninety-six adult female sea otters and 64 weanling sea otters were instrumented with implanted radio-transmitters in Prince William Sound during 1989-1990 and monitored until November, 1991. Observations of the movements of adult female and weanling sea otters in prince William Sound indicated no tendency for individuals to emigrate from, or immigrate to, the area affected by oil spilled from the Exxon Valdez. This finding indicates that the study groups of sea otters categorized as `western Prince William Sound oil-spill treatment` otters and `eastern Prince William Sound control` otters are indeed distinct groups of individuals. No tendency was observed for recently weaned sea otters to exhibit a preference for habitat units based on the likelihood that they would encounter spilled oil therein. Finally, data reported suggest that the recovery of the sea otter population in the oil spill affected region of Prince William Sound will likely be a direct function of the rates of survival and reproduction of the sea otters in the affected habitat with little or no influence from emigration or immigration.

  19. Hard time to be parents? Sea urchin fishery shifts potential reproductive contribution of population onto the shoulders of the young adults

    PubMed Central

    Guala, Ivan; Pires da Silva, Rodrigo; Brundu, Gianni; Baroli, Maura; Farina, Simone

    2017-01-01

    Background In Sardinia, as in other regions of the Mediterranean Sea, sustainable fisheries of the sea urchin Paracentrotus lividus have become a necessity. At harvesting sites, the systematic removal of large individuals (diameter ≥ 50 mm) seriously compromises the biological and ecological functions of sea urchin populations. Specifically, in this study, we compared the reproductive potential of the populations from Mediterranean coastal areas which have different levels of sea urchin fishing pressure. The areas were located at Su Pallosu Bay, where pressure is high and Tavolara-Punta Coda Cavallo, a marine protected area where sea urchin harvesting is low. Methods Reproductive potential was estimated by calculating the gonadosomatic index (GSI) from June 2013 to May 2014 both for individuals of commercial size (diameter without spines, TD ≥ 50 mm) and the undersized ones with gonads (30 ≤ TD < 40 mm and 40 ≤ TD < 50 mm). Gamete output was calculated for the commercial-size class and the undersized individuals with fertile gonads (40 ≤ TD < 50 mm) in relation to their natural density (gamete output per m2). Results The reproductive potential of populations was slightly different at the beginning of the sampling period but it progressed at different rates with an early spring spawning event in the high-pressure zone and two gamete depositions in early and late spring in the low-pressure zone. For each fertile size class, GSI values changed significantly during the year of our study and between the two zones. Although the multiple spawning events determined a two-fold higher total gamete output of population (popTGO) in the low-pressure zone, the population mean gamete output (popMGO) was similar in the two zones. In the high-pressure zone, the commercial-sized individuals represented approximatively 5% of the population, with almost all the individuals smaller than 60 mm producing an amount of gametes nearly three times lower than the undersized ones

  20. Steam reforming of tar derived from lignin over pompom-like potassium-promoted iron-based catalysts formed on calcined scallop shell.

    PubMed

    Guan, Guoqing; Kaewpanha, Malinee; Hao, Xiaogang; Zhu, Ai-Min; Kasai, Yutaka; Kakuta, Seiji; Kusakabe, Katsuki; Abudula, Abuliti

    2013-07-01

    In order to understand the improvement effect of potassium (K) on the catalytic activity of iron-loaded calcined scallop shell (CS) for the steam reforming tar derived from biomass, various K precursors were applied for the catalyst preparation. It is found that pompom-like iron-based particles with a mesoporous structure were easily formed on the surface of calcined scallop shell (CS) when K2CO3 was used as K precursor while no such kind of microsphere was formed when other kinds of K precursors such as KOH and KNO3 were applied. The optimum K-loading amount for the preparation of this catalyst was investigated. Based on the experimental results obtained, a mechanism for the formation of these microspheres was proposed. This pompom-like potassium-promoted iron-based catalyst showed a better catalytic activity and reusability for the steam reforming of tar derived from lignin.

  1. Proximal scalloped custom-made Relay® stent graft in chronic type B dissection: endovascular repair in a drug abuser patient

    PubMed Central

    Szeberin, Zoltán; Nemes, Balázs; Csobay-Novák, Csaba; Mihály, Zsuzsa; Entz, László

    2016-01-01

    The best solution for enlarging chronic type B aortic dissection is not known. Hybrid surgical and endovascular procedures offer a reliable solution in such circumstances, but technically complex stent-graft designs are sometimes needed when the treatment segment of the aorta presents anatomical challenges. We report a case of a proximally scalloped custom-made stent-graft implantation following left subclavian artery transposition in a formerly cocaine-abuser patient. The one-month follow-up computed tomography angiography showed a proximal endoleak (type Ia) which was successfully solved by coil embolization. Proximally scalloped stent grafts offer a reliable solution in complex aortic dissections involving the supra-aortic branches. PMID:28250982

  2. Comparison of total lipids and fatty acids from liver, heart and abdominal muscle of scalloped (Sphyrna lewini) and smooth (Sphyrna zygaena) hammerhead sharks.

    PubMed

    Davidson, Bruce Clement; Nel, Wynand; Rais, Afsha; Namdarizandi, Vahid; Vizarra, Scott; Cliff, Geremy

    2014-01-01

    Liver, heart and abdominal muscle samples from scalloped (Sphyrna lewini) and smooth (Sphyrna zygaena) hammerhead sharks were analysed to characterise their lipid and fatty acid profiles. Samples were compared both between and within species, but there were no significant differences in total lipids for either comparison, although much greater total amounts were found in the liver samples. Within the individual fatty acids, the only significant differences were greater amounts of 22:6n-3, total n-3 polyunsaturates and total polyunsaturates in smooth, when compared to scalloped, hammerhead liver. This may reflect the more wide spread distribution of this species into cooler waters. Within both species the liver levels of the same fatty acid fractions decreased from spring to summer, which may correlate with changes in fatty acid profile to adapt to any differences in amount or species of prey consumed, or other considerations, eg. buoyancy, however there was no data to clarify this.

  3. Refinement of AOAC Official Method 2005.06 liquid chromatography-fluorescence detection method to improve performance characteristics for the determination of paralytic shellfish toxins in king and queen scallops.

    PubMed

    Turner, Andrew D; Hatfield, Robert G

    2012-01-01

    AOAC Official Method 2005.06 LC-fluorescence detection (FLD) method is an official alternative to the mouse bioassay for the determination of paralytic shellfish poisoning (PSP) toxins in bivalve shellfish. To validate the method for species of relevance to the UK official control monitoring program, the method performance characteristics were tested for whole king and queen scallops. Validation showed that, while the performance was generally acceptable for the quantitation of non-N-hydroxylated toxins, poor toxin recovery and sensitivity was evident for the analysis of N-hydroxylated toxins following periodate oxidation. These effects occurred in a range of scallop samples with variable temporal and spatial sources. The effects were also noted in other laboratories following a small interlaboratory study. As a result, the method was refined to improve the recovery and sensitivity of analysis following the periodate oxidation step in the PSP method for scallops. Performance improved through alterations to the preparation of the periodate oxidant, use of higher volumes for C18 cleanup, and injection volumes in combination with the use of a king scallop matrix modifier for oxidation of N-hydroxylated toxin calibration standards. A single-laboratory validation of the refined method showed that the selectivity, linearity, sensitivity, recovery, and precision were acceptable and similar to values reported previously for AOAC Official Method 2005.06 in other bivalve species. Results showed the method to be rugged for all parameters investigated, including small changes to the composition of the new periodate reagent utilized in the refined method. The refined scallops LC method was subsequently compared with the European reference method. PSP-positive scallops showed an excellent agreement between the methods for queen and Atlantic scallops, with a small level of positive bias in the LC results for whole king scallops. These differences were related solely to the use of

  4. Risks and benefits of compost-like materials prepared by the thermal treatment of raw scallop hepatopancreas for supplying cadmium and the growth of alfalfa (Medicago sativa L.).

    PubMed

    Ushijima, Kensuke; Fukushima, Masami; Kanno, Shinya; Kanno, Itoko; Ohnishi, Mitsuhiro

    2016-01-01

    Scallop hepatopancreas, fishery waste, contains relatively high levels of Cd and organic nitrogen compounds, the latter of which represent a fertilizer. In this study, raw scallop hepatopancreas tissue was thermally treated with sawdust and red loam in the presence of an iron catalyst to produce compost-like materials (CLMs). Two CLM samples were prepared by varying the content of raw scallop hepatopancreas tissue: 46 wt.% for CLM-1 and 18 wt.% for CLM-2. Mixtures of control soil (CTL) and CLMs (CLM content: 10 and 25 wt.%) were examined for the growth of alfalfa (Medicago sativa L.) to evaluate the risks and benefits of using this material for fertilization. The Cd content in shoots and roots of alfalfa, that were grown in the presence of CLMs, was significantly higher than those for the plants grown in the CTL, indicating that Cd had accumulated in the plants from CLMs. The accumulation of Cd in the alfalfa roots was quite high in the case of the 25% CLM-1 sample. However, alfalfa growth was significantly promoted in the presence of 10% CLM-1. This can be attributed to the higher levels of nitrogen and humic substances, which serve as fertilizer components. Although the fertilization effect in case of CLM-1showed a potential benefit, the accumulation of Cd in alfalfa was clearly increased in the presence of both CLMs. In conclusion, the use of CLMs produced from raw scallop hepatopancreas tissue can be considered to have a desirable benefit from standpoint of its use as fertilizer, but is accompanied by a risk of the accumulation of Cd in alfalfa plants.

  5. Distribution and linkage of domoic acid (amnesic shellfish poisoning toxins) in subcellular fractions of the digestive gland of the scallop Pecten maximus.

    PubMed

    Mauriz, Aida; Blanco, Juan

    2010-01-01

    The king scallop Pecten maximus accumulates domoic acid, the main amnesic shellfish poisoning toxin, in the digestive gland for a long time. To try to find if the cause of this characteristic is the binding of the toxin to some cellular component, the subcellular distribution of domoic acid in the cells of the digestive gland was studied, by means of serial centrifugation, ultrafiltration and size exclusion chromatography (SEC). Domoic acid was found to be present mostly in soluble form in the cytosol, as more than 90% was found in the supernatant after a centrifugation of 1h at 45,000 x g, and passed a 10 kDa ultrafilter. The retention time of the peak with an absorption maximum of 242 nm--the one characteristic of domoic acid--observed in the SEC chromatograms of the scallop samples was found identical to be one of a reference solution of the toxin, indicating therefore, that domoic acid is free in the cytosol of the digestive gland of Pecten maximus. This finding turns the focus from binding to the lack of membrane transporters in this species of the scallop as the cause of the long retention time of domoic acid in this species.

  6. Salish Sea

    EPA Pesticide Factsheets

    The Health of the Salish Sea Report is a collaboration between EPA and Environment Canada to examine the health of the Salish Sea ecosystem in Washington and British Columbia, encompassing the Puget Sound and Georgia Basin.

  7. A Consensus Microsatellite-Based Linkage Map for the Hermaphroditic Bay Scallop (Argopecten irradians) and Its Application in Size-Related QTL Analysis

    PubMed Central

    Li, Hongjun; Liu, Xiao; Zhang, Guofan

    2012-01-01

    Bay scallop (Argopecten irradians) is one of the most economically important aquaculture species in China. In this study, we constructed a consensus microsatellite-based genetic linkage map with a mapping panel containing two hybrid backcross-like families involving two subspecies of bay scallop, A. i. irradians and A. i. concentricus. One hundred sixty-one microsatellite and one phenotypic (shell color) markers were mapped to 16 linkage groups (LGs), which corresponds to the haploid chromosome number of bay scallop. The sex-specific map was 779.2 cM and 781.6 cM long in female and male, respectively, whereas the sex-averaged map spanned 849.3 cM. The average resolution of integrated map was 5.9 cM/locus and the estimated coverage was 81.3%. The proportion of distorted markers occurred more in the hybrid parents, suggesting that the segregation distortion was possibly resulted from heterospecific interaction between genomes of two subspecies of bay scallop. The overall female-to-male recombination rate was 1.13∶1 across all linked markers in common to both parents, and considerable differences in recombination also existed among different parents in both families. Four size-related traits, including shell length (SL), shell height (SH), shell width (SW) and total weight (TW) were measured for quantitative trait loci (QTL) analysis. Three significant and six suggestive QTL were detected on five LGs. Among the three significant QTL, two (qSW-10 and qTW-10, controlling SW and TW, respectively) were mapped on the same region near marker AiAD121 on LG10 and explained 20.5% and 27.7% of the phenotypic variance, while the third (qSH-7, controlling SH) was located on LG7 and accounted for 15.8% of the phenotypic variance. Six suggestive QTL were detected on four different LGs. The linkage map and size-related QTL obtained in this study may facilitate marker-assisted selection (MAS) in bay scallop. PMID:23077533

  8. Modelling larval dispersal of the king scallop ( Pecten maximus) in the English Channel: examples from the bay of Saint-Brieuc and the bay of Seine

    NASA Astrophysics Data System (ADS)

    Nicolle, Amandine; Dumas, Franck; Foveau, Aurélie; Foucher, Eric; Thiébaut, Eric

    2013-06-01

    The king scallop ( Pecten maximus) is one of the most important benthic species of the English Channel as it constitutes the first fishery in terms of landings in this area. To support strategies of spatial fishery management, we develop a high-resolution biophysical model to study scallop dispersal in two bays along the French coasts of the English Channel (i.e. the bay of Saint-Brieuc and the bay of Seine) and to quantify the relative roles of local hydrodynamic processes, temperature-dependent planktonic larval duration (PLD) and active swimming behaviour (SB). The two bays are chosen for three reasons: (1) the distribution of the scallop stocks in these areas is well known from annual scallop stock surveys, (2) these two bays harbour important fisheries and (3) scallops in these two areas present some differences in terms of reproductive cycle and spawning duration. The English Channel currents and temperature are simulated for 10 years (2000-2010) with the MARS-3D code and then used by the Lagrangian module of MARS-3D to model the transport. Results were analysed in terms of larval distribution at settlement and connectivity rates. While larval transport in the two bays depended both on the tidal residual circulation and the wind-induced currents, the relative role of these two hydrodynamic processes varied among bays. In the bay of Saint-Brieuc, the main patterns of larval dispersal were due to tides, the wind being only a source of variability in the extent of larval patch and the local retention rate. Conversely, in the bay of Seine, wind-induced currents altered both the direction and the extent of larval transport. The main effect of a variable PLD in relation to the thermal history of each larva was to reduce the spread of dispersal and consequently increase the local retention by about 10 % on average. Although swimming behaviour could influence larval dispersal during the first days of the PLD when larvae are mainly located in surface waters, it has a

  9. Coupling experimental and field-based approaches to decipher carbon sources in the shell of the great scallop, Pecten maximus (L.)

    NASA Astrophysics Data System (ADS)

    Marchais, V.; Richard, J.; Jolivet, A.; Flye-Sainte-Marie, J.; Thébault, J.; Jean, F.; Richard, P.; Paulet, Y.-M.; Clavier, J.; Chauvaud, L.

    2015-11-01

    This research investigated how the carbon isotopic composition of food source (δ13Cfood) and dissolved inorganic carbon (δ13CDIC) influences the carbon isotopic composition of Pecten maximus shells (δ13Cshell) under both experimental and natural conditions. The objectives are to better understand the relationship between P. maximus and its environment, and to specifically distinguish conditions under which calcification is influenced by respired CO2 derived from food sources versus conditions in which calcification uses inorganic carbon from seawater. Laboratory experiment investigated carbon incorporation into shell carbonates by maintaining scallops under conditions where the stable carbon isotopic composition of food sources was considerably depleted (-54‰), relative to values observed in the natural environment (-21‰). Laboratory experiment ran for 78 days under three temperature conditions, 15 °C, 21 °C and 25 °C. A survey of the environmental parameters and stable carbon isotopic composition into shell carbonate of natural population of P. maximus was also realized during the same year in the Bay of Brest, France. Data collected from both laboratory experiment and the natural environment confirmed that both δ13CDIC and δ13Cfood influence δ13Cshell values and that organic carbon incorporation (CM) averages about 10% (4.3-6.8% under experimental conditions and 1.9-16.6% in the natural environment). The shift in stable carbon isotopic composition from the uptake of depleted food sources under experimental conditions realized a marked divergence in the predicted equilibrium between calcium carbonate and ambient bicarbonate, relative to the natural environment. This offset was 1.7 ± 0.6‰ for scallops in their natural environment and 2.5 ± 0.5 and 3.2 ± 0.9‰ for scallops under experimental conditions at water temperatures of 15 °C and 21 °C, respectively. The offset of 3‰ for scallops subjected to laboratory experiment could not be explained

  10. A Scallop Nitric Oxide Synthase (NOS) with Structure Similar to Neuronal NOS and Its Involvement in the Immune Defense

    PubMed Central

    Jiang, Qiufen; Zhou, Zhi; Wang, Leilei; Wang, Lingling; Yue, Feng; Wang, Jingjing; Song, Linsheng

    2013-01-01

    Background Nitric oxide synthase (NOS) is responsible for synthesizing nitric oxide (NO) from L-arginine, and involved in multiple physiological functions. However, its immunological role in mollusc was seldom reported. Methodology In the present study, an NOS (CfNOS) gene was identified from the scallop Chlamys farreri encoding a polypeptide of 1486 amino acids. Its amino acid sequence shared 50.0~54.7, 40.7~47.0 and 42.5~44.5% similarities with vertebrate neuronal (n), endothelial (e) and inducible (i) NOSs, respectively. CfNOS contained PDZ, oxygenase and reductase domains, which resembled those in nNOS. The CfNOS mRNA transcripts expressed in all embryos and larvae after the 2-cell embryo stage, and were detectable in all tested tissues with the highest level in the gonad, and with the immune tissues hepatopancreas and haemocytes included. Moreover, the immunoreactive area of CfNOS distributed over the haemocyte cytoplasm and cell membrane. After LPS, β-glucan and PGN stimulation, the expression level of CfNOS mRNA in haemocytes increased significantly at 3 h (4.0-, 4.8- and 2.7-fold, respectively, P < 0.01), and reached the peak at 12 h (15.3- and 27.6-fold for LPS and β-glucan respectively, P < 0.01) and 24 h (17.3-fold for PGN, P < 0.01). In addition, TNF-α also induced the expression of CfNOS, which started to increase at 1 h (5.2-fold, P < 0.05) and peaked at 6 h (19.9-fold, P < 0.01). The catalytic activity of the native CfNOS protein was 30.3 ± 0.3 U mgprot-1, and it decreased significantly after the addition of the selective inhibitors of nNOS and iNOS (26.9 ± 0.4 and 29.3 ± 0.1 U mgprot-1, respectively, P < 0.01). Conclusions These results suggested that CfNOS, with identical structure with nNOS and similar enzymatic characteristics to nNOS and iNOS, played the immunological role of iNOS to be involved in the scallop immune defense against PAMPs and TNF-α. PMID:23922688

  11. Red Sea

    Atmospheric Science Data Center

    2013-04-16

    article title:  The Red Sea     View Larger Image ... 2000. Located between the East African coast and the Saudi Arabian peninsula, the Red Sea got its name because the blooms of a type of ... 2000 - The Red Sea between the East Africa coast and Saudi Arabian peninsula. project:  MISR category:  ...

  12. Bering Sea

    NASA Technical Reports Server (NTRS)

    2002-01-01

    The skies of the Bering Sea were relatively clear again in this SeaWiFS image showing a band of aquamarine colored water. Credit: Provided by the SeaWiFS Project, NASA/Goddard Space Flight Center, and ORBIMAGE

  13. Bering Sea

    NASA Technical Reports Server (NTRS)

    2002-01-01

    Much of the Bering Sea is clear in this SeaWiFS image. The large expanse of bright aquamarine water is clearly visible. Credit: Provided by the SeaWiFS Project, NASA/Goddard Space Flight Center, and ORBIMAGE

  14. Juvenile King Scallop, Pecten maximus, Is Potentially Tolerant to Low Levels of Ocean Acidification When Food Is Unrestricted

    PubMed Central

    Sanders, Matthew Burton; Bean, Tim P.; Hutchinson, Thomas H.; Le Quesne, Will J. F.

    2013-01-01

    The decline in ocean water pH and changes in carbonate saturation states through anthropogenically mediated increases in atmospheric CO2 levels may pose a hazard to marine organisms. This may be particularly acute for those species reliant on calcareous structures like shells and exoskeletons. This is of particular concern in the case of valuable commercially exploited species such as the king scallop, Pecten maximus. In this study we investigated the effects on oxygen consumption, clearance rates and cellular turnover in juvenile P. maximus following 3 months laboratory exposure to four pCO2 treatments (290, 380, 750 and 1140 µatm). None of the exposure levels were found to have significant effect on the clearance rates, respiration rates, condition index or cellular turnover (RNA: DNA) of individuals. While it is clear that some life stages of marine bivalves appear susceptible to future levels of ocean acidification, particularly under food limiting conditions, the results from this study suggest that where food is in abundance, bivalves like juvenile P. maximus may display a tolerance to limited changes in seawater chemistry. PMID:24023928

  15. Complete genome sequence of acute viral necrosis virus associated with massive mortality outbreaks in the Chinese scallop, Chlamys farreri

    PubMed Central

    2013-01-01

    Background Acute viral necrosis virus (AVNV) is the causative agent of a serious disease resulting in high mortality in cultured Chinese scallops, Chlamys farreri. We have sequenced and analyzed the complete genome of AVNV. Results The AVNV genome is a linear, double-stranded DNA molecule of 210,993 bp with a nucleotide composition of 38.5% G + C. A total of 123 open reading frames were predicted to encode functional proteins, ranging from 41 to 1,878 amino acid residues. The DNA sequence of AVNV is 97% identical to that of ostreid herpesvirus 1 (OsHV-1), and the amino acid sequences of the encoded proteins of these two viruses are 94-100% identical. The genomic organization of AVNV is similar to that of OsHV-1, and consists of two unique regions (170.4 kb and 3.4 kb, respectively), each flanked by two inverted repeats (7.6 kb and 10.2 kb, respectively), with a third unique region (1.5 kb) situated between the two internal repeats. Conclusions Our results indicate that AVNV is a variant of OsHV-1. The AVNV genome sequence provides information useful for understanding the evolution and divergence of OsHV-1 in marine molluscs. PMID:23566284

  16. Juvenile king scallop, Pecten maximus, is potentially tolerant to low levels of ocean acidification when food is unrestricted.

    PubMed

    Sanders, Matthew Burton; Bean, Tim P; Hutchinson, Thomas H; Le Quesne, Will J F

    2013-01-01

    The decline in ocean water pH and changes in carbonate saturation states through anthropogenically mediated increases in atmospheric CO2 levels may pose a hazard to marine organisms. This may be particularly acute for those species reliant on calcareous structures like shells and exoskeletons. This is of particular concern in the case of valuable commercially exploited species such as the king scallop, Pecten maximus. In this study we investigated the effects on oxygen consumption, clearance rates and cellular turnover in juvenile P. maximus following 3 months laboratory exposure to four pCO2 treatments (290, 380, 750 and 1140 µatm). None of the exposure levels were found to have significant effect on the clearance rates, respiration rates, condition index or cellular turnover (RNA: DNA) of individuals. While it is clear that some life stages of marine bivalves appear susceptible to future levels of ocean acidification, particularly under food limiting conditions, the results from this study suggest that where food is in abundance, bivalves like juvenile P. maximus may display a tolerance to limited changes in seawater chemistry.

  17. The comparison between allozyme and RAPD makers for the population genetic structure analysis of scallop Chlamys farreri

    NASA Astrophysics Data System (ADS)

    Liu, Baozhong; You, Feng; Dong, Bo; Xiang, Jianhai

    2006-09-01

    To compare genetic markers for population genetics analysis, allozyme electrophoresis and random amplified polymorphic DNA (RAPD) were used to detect the genetic structure of scallop Chlamys farreri population. Thirteen enzymes (MDH, ME, IDH, GPI, PGM, PEP-LG, PEP-PP, ACP, AK, PK, AAT, SOD, EST) in three buffer systems (TC, Ph6.9; TMME, Ph 7.4; and EBT, pH8.9) were selected and 22 loci were used for the analysis, among them 7 loci (Gpi, Pgm, Pep-LG-1, Pep-PP Aat-2, Est-2, Est-3) were polymorphic which attributed 31.82% to the total. The average of heterozygosity was 0.113 and most of the studied loci showed heterozygote deficiencies. The same specimens were investigated using 10 arbitrarily selected primers (10-base). Twenty two of 54 RAPD fragments were polymorphic with average heterozygosity of 0.194. The result indicated that the two types of markers reflected a consistent trend in the parameter values of genetic diversity of the population, but RAPD revealed more information of genetic variation than allozyme electrophoresis.

  18. Cell cycle genes regulate vestigial and scalloped to ensure normal proliferation in the wing disc of Drosophila melanogaster.

    PubMed

    Legent, Kevin; Dutriaux, Annie; Delanoue, Rénald; Silber, Joël

    2006-08-01

    In Drosophila, the Vestigial-Scalloped (VG-SD) dimeric transcription factor is required for wing cell identity and proliferation. Previous results have shown that VG-SD controls expression of the cell cycle positive regulator dE2F1 during wing development. Since wing disc growth is a homeostatic process, we investigated the possibility that genes involved in cell cycle progression regulate vg and sd expression in feedback loops. We focused our experiments on two major regulators of cell cycle progression: dE2F1 and the antagonist dacapo (dap). Our results reinforce the idea that VG/SD stoichiometry is critical for correct development and that an excess in SD over VG disrupts wing growth. We reveal that transcriptional activity of VG-SD and the VG/SD ratio are both modulated by down-expression of cell cycle genes. We also detected a dap-induced sd up-regulation that disrupts wing growth. Moreover, we observed a rescue of a vg hypomorphic mutant phenotype by dE2F1 that is concomitant with vg and sd induction. This regulation of the VG-SD activity by dE2F1 is dependent on the vg genetic background. Our results support the hypothesis that cell cycle genes fine-tune wing growth and cell proliferation, in part, through control of the VG/SD stoichiometry and activity. This points to a homeostatic feedback regulation between proliferation regulators and the VG-SD wing selector.

  19. Prevalence, Clinical Profile, Iron Status, and Subject-Specific Traits for Excessive Erythrocytosis in Andean Adults Living Permanently at 3,825 Meters Above Sea Level

    PubMed Central

    De Ferrari, Aldo; Miranda, J. Jaime; Gilman, Robert H.; Dávila-Román, Victor G.; León-Velarde, Fabiola; Rivera-Ch, Maria; Huicho, Luis; Bernabé-Ortiz, Antonio; Wise, Robert A.

    2014-01-01

    BACKGROUND: Excessive erythrocytosis (EE) is a prevalent condition in populations living at high altitudes (> 2,500 m above sea level). Few large population-based studies have explored the association between EE and multiple subject-specific traits including oxygen saturation, iron status indicators, and pulmonary function. METHODS: We enrolled a sex-stratified and age-stratified sample of 1,065 high-altitude residents aged ≥ 35 years from Puno, Peru (3,825 m above sea level) and conducted a standardized questionnaire and physical examination that included spirometry, pulse oximetry, and a blood sample for multiple clinical markers. Our primary objectives were to estimate the prevalence of EE, characterize the clinical profile and iron status indicators of subjects with EE, and describe subject-specific traits associated with EE. RESULTS: Overall prevalence of EE was 4.5% (95% CI, 3.3%-6.0%). Oxygen saturation was significantly lower among EE than non-EE group subjects (85.3% vs 90.1%, P < .001) but no difference was found in iron status indicators between both groups (P > .09 for all values). In multivariable logistic regression, we found that age ≥ 65 years (OR = 2.45, 95% CI, 1.16-5.09), male sex (3.86, 1.78-9.08), having metabolic syndrome (2.66, 1.27-5.75) or being overweight (5.20, 1.95-16.77), pulse oximetry < 85% (14.90, 6.43-34.90), and % predicted FVC < 80% (13.62, 4.40-41.80) were strongly associated with EE. Attributable fractions for EE were greatest for being overweight (26.7%), followed by male sex (21.5%), pulse oximetry < 85% (16.4%), having metabolic syndrome (14.4%), and % predicted FVC < 80% (9.3%). CONCLUSIONS: We found a lower prevalence of EE than in previous reports in the Peruvian Andes. Although the presence of hypoxemia and decreased vital capacity were strongly associated with excessive erythrocytosis, being overweight or having metabolic syndrome were associated with an important fraction of cases in our study population. PMID

  20. Molecular cloning and characterization of a putative lipopolysaccharide-induced TNF-alpha factor (LITAF) gene homologue from Zhikong scallop Chlamys farreri.

    PubMed

    Yu, Yundong; Qiu, Limei; Song, Linsheng; Zhao, Jianmin; Ni, Duojiao; Zhang, Ying; Xu, Wei

    2007-08-01

    LPS-induced TNF-alpha factor (LITAF) is a novel transcriptional factor that was first discovered in LPS-stimulated human macrophage cell line THP-1. LITAF can bind to TNF-alpha promoter to regulate its expression. The first scallop LITAF (named as CfLITAF) was cloned from Zhikong scallop Chlamys farreri by Expressed Sequence Tag (EST) and Polymerase Chain Reaction (PCR) techniques. The cDNA of CfLITAF was of 1240 bp and consisted of a 5' untranslated region (UTR) of 112 bp, a 3' UTR of 678 bp and an open reading frame (ORF) of 450 bp encoding a polypeptide of 149 amino acids with an estimated molecular mass of 16.08 kDa and theoretical isoelectric point of 6.77. A typical conserved LITAF-domain was identified in CfLITAF by SMART analysis. Homology analysis of the deduced amino acid sequence of CfLITAF with other known sequences by using the BLAST program revealed that CfLITAF was homologous to the LITAF from human and rat (Identity = 46%), cattle, horse, mouse and chicken (Identity = 48%), western clawed frog (Identity=42%), and zebrafish (Identity = 50%). The mRNA expression of CfLITAF in different tissues including haemocytes, muscle, mantle, heart, gill and gonad, and the temporal expression in haemocytes challenged by LPS or peptidoglycan (PGN) were measured by Real-time RT-PCR. CfLITAF mRNA transcripts could be detected in all tissues examined and be up-regulated in haemocytes after LPS challenge. No significant changes were observed after PGN stimulation. All these data indicated the existence of LITAF in scallop and also provided clue on the presence of TNF-alpha-like molecules in invertebrates.

  1. Molecular characterization of two ferritins of the scallop Argopecten purpuratus and gene expressions in association with early development, immune response and growth rate.

    PubMed

    Coba de la Peña, Teodoro; Cárcamo, Claudia B; Díaz, María I; Brokordt, Katherina B; Winkler, Federico M

    2016-08-01

    Ferritin is involved in several iron homoeostasis processes in molluscs. We characterized two ferritin homologues and their expression patterns in association with early development, growth rate and immune response in the scallop Argopecten purpuratus, a species of economic importance for Chile and Peru. Two ferritin subunits (Apfer1 and Apfer2) were cloned. Apfer1 cDNA is a 792bp clone containing a 516bp open reading frame (ORF) that corresponds to a novel ferritin subunit in A. purpuratus. Apfer2 cDNA is a 681bp clone containing a 522bp ORF that corresponds to a previously sequenced EST. A putative iron responsive element (IRE) was identified in the 5'-untranslated region of both genes. The deduced protein sequences of both cDNAs possessed the motifs and domains characteristic of functional ferritin subunits. Both genes showed differential expression patterns at tissue-specific and early development stage levels. Apfer1 expression level increased 40-fold along larval developmental stages, decreasing markedly after larval settlement. Apfer1 expression in mantle tissue was 2.8-fold higher in fast-growing than in slow-growing scallops. Apfer1 increased 8-fold in haemocytes 24h post-challenge with the bacterium Vibrio splendidus. Apfer2 expression did not differ between fast- and slow-growing scallops or in response to bacterial challenge. These results suggest that Apfer1 and Apfer2 may be involved in iron storage, larval development and shell formation. Apfer1 expression may additionally be involved in immune response against bacterial infections and also in growth; and thus would be a potential marker for immune capacity and for fast growth in A. purpuratus.

  2. Molecular cloning, expression of a big defensin gene from bay scallop Argopecten irradians and the antimicrobial activity of its recombinant protein.

    PubMed

    Zhao, Jianmin; Song, Linsheng; Li, Chenghua; Ni, Duojiao; Wu, Longtao; Zhu, Ling; Wang, Hao; Xu, Wei

    2007-01-01

    Antimicrobial peptides are important components of the host innate immune responses by exerting broad-spectrum microbicidal activity against pathogenic microbes. The first mollusk big defensin (designated AiBD) cDNA was cloned from bay scallop Argopecten irradians by expressed sequence tag (EST) and rapid amplification of cDNA ends (RACE) techniques. The scallop AiBD consisted of 531 nucleotides with a canonical polyadenylation signal sequence AATAAA and a poly(A) tail, encoding a polypeptide of 122 amino acids. The high similarity of AiBD deduced amino acid sequence with big defensin from Tachypleus tridentatus and Branchiostoma belcheri tsingtaunese indicated that AiBD should be a member of big defensin family. The expression of AiBD in various tissues was measured by using Northern blotting analysis. mRNA transcripts of AiBD could be detected in haemocytes of unchallenged scallops. The temporal expression of AiBD in haemolymph after Vibrio anguilarum challenge was recorded by quantitative real time PCR. The relative expression level of AiBD in haemolymph was up-regulated evenly in the first 8 h, followed by a drastic increase, and increased 131.1-fold at 32 h post-injection. These results indicated that AiBD could be induced by bacterial challenge, and it should participate in the immune responses of A. irradians. Biological activity assay revealed that recombinant AiBD could inhibit the growth of both Gram-positive and Gram-negative bacteria, and also showed strong fungicidal activity towards the expression host. Recombinant expression of AiBD made it possible to further characterize its functions involved in immune responses, and also provided a potential therapeutic agent for disease control in aquaculture.

  3. Functional characterization of a Δ5-like fatty acyl desaturase and its expression during early embryogenesis in the noble scallop Chlamys nobilis Reeve.

    PubMed

    Liu, Helu; Guo, Zhicheng; Zheng, Huaiping; Wang, Shuqi; Wang, Yajun; Liu, Wenhua; Zhang, Guofan

    2014-11-01

    Long-chain polyunsaturated fatty acids (LC-PUFAs) are essential in lots of important physiological processes, while, many marine species have no or limited ability of endogenous PUFA biosynthesis, normally due to the lack of key enzymes such as fatty acid desaturase (FAD). In this study, we isolated a scallop Chlamys nobilis cDNA with high homology to vertebrate FADs. Functional characterization in recombinant yeast Saccharomyces cerevisiae showed that scallop FAD exhibited Δ5-desaturation activity towards both saturated and PUFA substrates. Thus, it efficiently desaturated exogenously added PUFA C20:4(n - 3) and C20:3(n - 6) to C20:5(n - 3) (EPA) and C20:4(n - 6) (ARA) respectively. It also converted the yeast's endogenous C18:0 into C18:1(n - 13), and participated in the biosynthesis of non-methylene-interrupted FA by introducing a double bond to C20:3(n - 3) and C20:2(n - 6) in the Δ5 carbon. Temporal transcript profile of scallop FAD was studied during early embryonic development. High level of mRNA was found at the beginning of embryogenesis (egg) and noticeable decreases of were observed during larvae development, suggesting maternal FAD mRNA transfer to the embryo. Further, FAD transcripts were detected in all tissues analyzed, with the gonad and hepatopancreas showing the highest expression.

  4. Molecular Cloning, Characterization, and Expression of a Catalase Gene in the Japanese Scallop Mizuhopecten yessoensis Induced in the Presence of Cadmium

    NASA Astrophysics Data System (ADS)

    Gao, Jialong; Ishizaki, Shoichiro; Nagashima, Yuji

    2016-03-01

    Cadmium (Cd) is known to influence the oxidative status of marine organisms and can induce the formation of reactive oxygen species (ROS). Catalase (CAT) is one of the important enzymes involved in scavenging high levels of ROS. In present study, we cloned CAT cDNA and investigated the response of this enzyme at the transcriptional level in the Japanese scallop Mizuhopecten yessoensis exposed to Cd. The full-length CAT cDNA (MyCAT) of 1,870 nucleotides including a 57 bp 5'-UTR, a coding sequence of 1,500 bp and a 313 bp 3'-UTR were identified from the scallop. The deduced amino acid sequence of MyCAT corresponds to 499 amino acids with predicted molecular weight of 56.48 kDa and contains highly conserved motifs of the proximal heme-binding site RLFSYSTH, proximal active signature FNRERIPERVVHAKGGG and three catalytic amino acid residues His72, Asn145, and Tyr355. Its significant homology to CATs from multiple alignments revealed that MyCAT had a high identity with CATs from other mollusks. CAT mRNA expression analysis revealed that expression level was highest in the digestive gland ( p < 0.01) but weak in muscle. Following exposure to 200 and 400 µg/l of Cd, a high amount of Cd was found to have accumulated in the digestive gland and CAT mRNA expression had significantly increased in this organ among 7-day exposed scallops ( p < 0.001). The result demonstrated that antioxidant enzymes such as CAT play important roles in counteracting Cd stress in M. yessoensis.

  5. Examination of body burden and taint for Iceland scallop (Chlamys islandica) and American plaice (Hippoglossoides platessoides) near the Terra Nova offshore oil development over ten years of drilling on the Grand Banks of Newfoundland, Canada

    NASA Astrophysics Data System (ADS)

    DeBlois, Elisabeth M.; Kiceniuk, Joe W.; Paine, Michael D.; Kilgour, Bruce W.; Tracy, Ellen; Crowley, Roger D.; Williams, Urban P.; Gregory Janes, G.

    2014-12-01

    This paper presents results of analyses of body burdens of metals and hydrocarbons, and taste tests for taint, in Iceland scallop and American plaice performed as part of the Environmental Effects Monitoring (EEM) program for the Terra Nova offshore oil development (Grand Banks of Newfoundland, Canada). Scallop and plaice were collected in a Study Area located within approximately 1 km of drill centres at Terra Nova and in a Reference Area located approximately 20 km from the development. Samples were collected in 1997 to establish a baseline, and from 2000 to 2010, during drilling periods. Scallop adductor muscle tissue was contaminated with >C10-C21 aliphatic hydrocarbons resembling the drilling fluid in the synthetic drilling mud (SBM) used at Terra Nova in 2000, 2002 and 2004, but contamination of adductor muscle was not noted in 2006, 2008 and 2010. The maximum concentration in muscle was 28 mg/kg wet weight, noted in 2002. Scallop viscera was contaminated with hydrocarbons resembling drilling fluid in SBMs near drill centres in all EEM years except 2010. Viscera contamination with >C10-C21 hydrocarbons gradually decreased from a maximum of 150 mg/kg in 2000, to a maximum of 27 mg/kg in 2008; all values were below the laboratory reporting detection limit of 15 mg/kg in 2010. Therefore, evidence from both muscle and viscera indicates a decrease in tissue hydrocarbon contamination in recent years. Barium, another major constituent in drilling muds, has not been noted in scallop adductor muscles at concentrations above the reporting detection limit, but barium was detected in viscera in baseline and EEM years. The maximum concentration of barium in viscera during baseline sampling was 8 mg/kg. The maximum concentration in EEM years (29 mg/kg) was noted in 2000. The maximum concentration in 2010 was 25 mg/kg. The concentration of metals other than barium in scallop tissues was similar between the Terra Nova Study Area and the Reference Area. Hydrocarbons

  6. Molecular characterization of an inhibitor of NF-κB in the scallop Argopecten purpuratus: First insights into its role on antimicrobial peptide regulation in a mollusk.

    PubMed

    Oyanedel, D; Gonzalez, R; Flores-Herrera, P; Brokordt, K; Rosa, R D; Mercado, L; Schmitt, P

    2016-05-01

    Inhibitors of nuclear factor kappa B (IκBs) are major control components of the Rel/NF-κB signaling pathway, a key regulator in the modulation of the expression of immune-related genes in vertebrates and invertebrates. The activation of the Rel/NF-κB signaling pathway depends largely in the degradation of IκB proteins and thus, IκBs are a main target for the identification of genes whose expression is controlled by Rel/NF-κB pathway. In order to identify such regulation in bivalve mollusks, the cDNA sequence encoding an IκB protein was characterized in the scallop Argopecten purpuratus, ApIκB. The cDNA sequence of ApIκB is comprised of 1480 nucleotides with a 1086 bp open reading frame encoding for 362 amino acids. Bioinformatics analysis showed that ApIκB displays the conserved features of IκB proteins. The deduced amino acid sequence consists of a 39.7 kDa protein, which has an N-terminal degradation motif, six ankyrin repeats and a C-terminal phosphorylation site motif. Phylogenetic analysis revealed a high degree of identity between ApIκB and other IκBs from mollusks, but also to arthropod cactus proteins and vertebrate IκBs. Tissue expression analysis indicated that ApIκB is expressed in all examined tissues and it is upregulated in circulating hemocytes from scallops challenged with the pathogenic Gram-negative bacterium Vibrio splendidus. After inhibiting ApIκB gene expression using the RNA interference technology, the gene expression of the antimicrobial peptide big defensin was upregulated in hemocytes from non-challenged scallops. Results suggest that ApIκB may control the expression of antimicrobial effectors such as big defensin via a putative Rel/NF-κB signaling pathway. This first evidence will help to deepen the knowledge of the Rel/NF-κB conserved pathway in scallops.

  7. Examining the Effects of Chromatic Aberration, Object Distance, and Eye Shape on Image-Formation in the Mirror-Based Eyes of the Bay Scallop Argopecten irradians.

    PubMed

    Speiser, Daniel I; Gagnon, Yakir Luc; Chhetri, Raghav K; Oldenburg, Amy L; Johnsen, Sönke

    2016-11-01

    The eyes of scallops form images using a concave spherical mirror and contain two separate retinas, one layered on top of the other. Behavioral and electrophysiological studies indicate that the images formed by these eyes have angular resolutions of about 2°. Based on previous ray-tracing models, it has been thought that the more distal of the two retinas lies near the focal point of the mirror and that the proximal retina, positioned closer to the mirror at the back of the eye, receives light that is out-of-focus. Here, we propose three mechanisms through which both retinas may receive focused light: (1) chromatic aberration produced by the lens may cause the focal points for longer and shorter wavelengths to fall near the distal and proximal retinas, respectively; (2) focused light from near and far objects may fall on the distal and proximal retinas, respectively; and (3) the eyes of scallops may be dynamic structures that change shape to determine which retina receives focused light. To test our hypotheses, we used optical coherence tomography (OCT), a method of near-infrared optical depth-ranging, to acquire virtual cross-sections of live, intact eyes from the bay scallop Argopecten irradians Next, we used a custom-built ray-tracing model to estimate the qualities of the images that fall on an eye's distal and proximal retinas as functions of the wavelengths of light entering the eye (400-700 nm), object distances (0.01-1 m), and the overall shape of the eye. When we assume 550 nm wavelength light and object distances greater than 0.01 m, our model predicts that the angular resolutions of the distal and proximal retinas are 2° and 7°, respectively. Our model also predicts that neither chromatic aberration nor differences in object distance lead to focused light falling on the distal and proximal retinas simultaneously. However, if scallops can manipulate the shapes of their eyes, perhaps through muscle contractions, we speculate that they may be able

  8. Monitoring of DSP toxins in small-sized plankton fraction of seawater collected in Mutsu Bay, Japan, by ELISA method: relation with toxin contamination of scallop.

    PubMed

    Imai, Ichiro; Sugioka, Hikaru; Nishitani, Goh; Mitsuya, Tadashi; Hamano, Yonekazu

    2003-01-01

    Monitorings were conducted on DSP toxins in mid-gut gland of scallop (mouse assay), cell numbers of toxic dinoflagellate species of Dinophysis, and diarrhetic shellfish poisoning (DSP) toxins in small-sized (0.7-5 microm) plankton fraction of seawater collected from surface (0 m) and 20 m depth at a station in Mutsu Bay, Aomori Prefecture, Japan, in 2000. A specific enzyme-linked immunosorbent assay (ELISA) was employed for the analysis of DSP toxins in small-sized plankton fraction using a mouse monoclonal anti-okadaic acid antibody which recognizes okadaic acid, dinophysistoxin-1, and dinophysistoxin-3. DSP toxins were detected twice in the mid-gut gland of scallops at 1.1-2.3 MU (mouse units) g(-1) on 26 June and at 0.6-1.2 MU g(-1) on 3 July, respectively. Relatively high cell densities of D. fortii were observed on 26 June and 11 September, and may only contribute to the bivalve toxicity during late June to early July. D. acuminata did not appear to be responsible for the toxicity of scallops in Mutsu Bay in 2000. ELISA monitoring of small-sized plankton fraction in seawater could detect DSP toxins two weeks before the detection of the toxin in scallops, and could do so two weeks after the loss of the bivalve toxicity by mouse assay. On 17 July, toxic D. fortii was detected at only small number, <10 cells l(-1), but DSP toxins were detected by the ELISA assay, suggesting a presence of other toxic small-sized plankton in seawater. For the purpose of reducing negative impacts of DSP occurrences, monitorings have been carried out hitherto on DSP toxins of bivalve tissues by mouse assay and on cell densities of "toxic" species of Dinophysis. Here we propose a usefulness of ELISA monitoring of plankton toxicity, especially in small-sized fraction, which are possible foods of mixotrophic Dinophysis, as a practical tool for detecting and predicting DSPs in coastal areas of fisheries grounds of bivalve aquaculture.

  9. Global Phylogeography with Mixed-Marker Analysis Reveals Male-Mediated Dispersal in the Endangered Scalloped Hammerhead Shark (Sphyrna lewini)

    PubMed Central

    Daly-Engel, Toby S.; Seraphin, Kanesa D.; Holland, Kim N.; Coffey, John P.; Nance, Holly A.; Toonen, Robert J.; Bowen, Brian W.

    2012-01-01

    Background The scalloped hammerhead shark, Sphyrna lewini, is a large endangered predator with a circumglobal distribution, observed in the open ocean but linked ontogenetically to coastal embayments for parturition and juvenile development. A previous survey of maternal (mtDNA) markers demonstrated strong genetic partitioning overall (global ΦST = 0.749) and significant population separations across oceans and between discontinuous continental coastlines. Methodology/Principal Findings We surveyed the same global range with increased sample coverage (N = 403) and 13 microsatellite loci to assess the male contribution to dispersal and population structure. Biparentally inherited microsatellites reveal low or absent genetic structure across ocean basins and global genetic differentiation (FST = 0.035) over an order of magnitude lower than the corresponding measures for maternal mtDNA lineages (ΦST = 0.749). Nuclear allelic richness and heterozygosity are high throughout the Indo-Pacific, while genetic structure is low. In contrast, allelic diversity is low while population structure is higher for populations at the ends of the range in the West Atlantic and East Pacific. Conclusions/Significance These data are consistent with the proposed Indo-Pacific center of origin for S. lewini, and indicate that females are philopatric or adhere to coastal habitats while males facilitate gene flow across oceanic expanses. This study includes the largest sampling effort and the most molecular loci ever used to survey the complete range of a large oceanic predator, and findings emphasize the importance of incorporating mixed-marker analysis into stock assessments of threatened and endangered shark species. PMID:22253848

  10. Survey of levels of cadmium in oysters, mussels, clams and scallops from the Pacific Northwest coast of Canada.

    PubMed

    Bendell, L I

    2009-01-01

    Field and retail collections of bivalves from the Pacific Northwest, Canada, were analysed for cadmium concentrations by atomic absorption spectrophotometry (AAS). Both collections of varnish (Nuttallia obscurata) and manila (Venerupis philippinarum) clams contained cadmium concentrations of less than 0.5 µg g(-1), well below international safety guidelines of 1 and 2 µg g(-1) wet weight cadmium for the European and Hong Kong markets, respectively, as well as the 2 µg g(-1) safety guideline set by the Codex Alimentarius Commission (CAC). Cadmium concentrations in retail collections of the Pacific oyster, Crassostrea gigas, were generally above 2 µg g(-1) wet weight (range = 1.5-3.56 µg g(-1)). Retail collections of the mussel, Mytilus spp., contained cadmium concentrations below the 2 µg g(-1) wet weight guideline, but not always the 1 µg g(-1) limit (range = 0.15-1.8 µg g(-1)). However, field collections of Mytilus spp. contained cadmium concentrations between 0.35 and 4.00 µg g(-1) wet weight, and depending on sampling location, concentrations exceeded the CAC guidelines by more than two-fold. Locations where mussels had high cadmium concentrations correlated with regions that had previously reported high values for cadmium in Pacific oysters (r = 0.65; p < 0.05). Of the various shellfish analysed, the four species of scallops, Chlamys hastata, C. rubida, Crassadoma gigantea, and Patinopecten yessoensis, contained the greatest concentrations of cadmium, in excess of 5 µg g(-1) wet weight (range = 4.97-8.98 µg g(-1)) with the greatest concentrations determined for C. gigantea. Cadmium concentrations in shellfish from the Pacific Northwest are greater than values reported for shellfish from other regions of the world and consumers need be aware of Health Canada consumption guidelines for shellfish from this region.

  11. Early Exposure of Bay Scallops (Argopecten irradians) to High CO2 Causes a Decrease in Larval Shell Growth

    PubMed Central

    White, Meredith M.; McCorkle, Daniel C.; Mullineaux, Lauren S.; Cohen, Anne L.

    2013-01-01

    Ocean acidification, characterized by elevated pCO2 and the associated decreases in seawater pH and calcium carbonate saturation state (Ω), has a variable impact on the growth and survival of marine invertebrates. Larval stages are thought to be particularly vulnerable to environmental stressors, and negative impacts of ocean acidification have been seen on fertilization as well as on embryonic, larval, and juvenile development and growth of bivalve molluscs. We investigated the effects of high CO2 exposure (resulting in pH = 7.39, Ωar = 0.74) on the larvae of the bay scallop Argopecten irradians from 12 h to 7 d old, including a switch from high CO2 to ambient CO2 conditions (pH = 7.93, Ωar = 2.26) after 3 d, to assess the possibility of persistent effects of early exposure. The survival of larvae in the high CO2 treatment was consistently lower than the survival of larvae in ambient conditions, and was already significantly lower at 1 d. Likewise, the shell length of larvae in the high CO2 treatment was significantly smaller than larvae in the ambient conditions throughout the experiment and by 7 d, was reduced by 11.5%. This study also demonstrates that the size effects of short-term exposure to high CO2 are still detectable after 7 d of larval development; the shells of larvae exposed to high CO2 for the first 3 d of development and subsequently exposed to ambient CO2 were not significantly different in size at 3 and 7 d than the shells of larvae exposed to high CO2 throughout the experiment. PMID:23596514

  12. Caspian Sea

    NASA Technical Reports Server (NTRS)

    2002-01-01

    In this Moderate-resolution Imaging Spectroradiometer (MODIS) image from December 3, 2001, winter sea ice can be seen forming in the shallow waters of the northern Caspian (left) and Aral (upper right) Seas. Despite the inflow of the Volga River (upper left), the northern portion of the Caspian Sea averages only 17 feet in depth, and responds to the region's continental climate, which is cold in winter and hot and dry in the summer. The southern part of the Sea is deeper and remains ice-free throughout the winter. The dirty appearance of the ice may be due to sediment in the water, but may also be due to wind-driven dust. The wind in the region can blow at hurricane-force strength and can cause the ice to pile up in hummocks that are anchored to the sea bottom. The eastern portion of the Aral Sea is also beginning to freeze. At least two characteristics of the Aral Sea 'compete' in determining whether its waters will freeze. The Sea is shallow, which increases the likelihood of freezing, but it is also very salty, which means that lower temperatures are required to freeze it than would be required for fresh water. With average December temperatures of 18oF, it's clearly cold enough to allow ice to form. As the waters that feed the Aral Sea continue to be diverted for agriculture, the Sea becomes shallower and the regional climate becomes even more continental. This is because large bodies of water absorb and retain heat, moderating seasonal changes in temperature. Image courtesy Jacques Descloitres, MODIS Land Rapid Response Team at NASA GSFC

  13. Accumulation of γ‐aminobutyric acid by E nterococcus avium 9184 in scallop solution in a two‐stage fermentation strategy

    PubMed Central

    Yang, Haoyue; Hu, Linfeng; Liu, Song

    2015-01-01

    Summary In this study, a new bacterial strain having a high ability to produce γ‐aminobutyric acid (GABA) was isolated from naturally fermented scallop solution and was identified as E nterococcus avium. To the best of our knowledge, this is the first study to prove that E . avium possesses glutamate decarboxylase activity. The strain was then mutagenized with UV radiation and was designated as E . avium 9184. Scallop solution was used as the culture medium to produce GABA. A two‐stage fermentation strategy was applied to accumulate GABA. In the first stage, cell growth was regulated. Optimum conditions for cell growth were pH, 6.5; temperature, 37°C; and glucose concentration, 10 g·L−1. This produced a maximum dry cell mass of 2.10 g·L−1. In the second stage, GABA formation was regulated. GABA concentration reached 3.71 g·L−1 at 96 h pH 6.0, 37°C and initial l‐monosodium glutamate concentration of 10 g·L−1. Thus, compared with traditional one‐stage fermentation, the two‐stage fermentation significantly increased GABA accumulation. These results provide preliminary data to produce GABA using E . avium and also provide a new approach to process and utilize shellfish. PMID:26200650

  14. Crystallization and preliminary X-ray analysis of the Ca{sup 2+}-bound C-terminal lobe of troponin C in complex with a troponin I-derived peptide fragment from Akazara scallop

    SciTech Connect

    Yumoto, Fumiaki; Nagata, Koji; Miyauchi, Yumiko; Ojima, Takao; Tanaka, Hiroyuki; Nishita, Kiyoyoshi; Ohtsuki, Iwao; Tanokura, Masaru

    2007-06-01

    Recombinant TnC was expressed in Escherichia coli, purified, complexed with a 24-residue synthetic peptide derived from scallop troponin I (TnI) and crystallized. Troponin C (TnC) is the Ca{sup 2+}-binding component of troponin and triggers muscle contraction. TnC of the invertebrate Akazara scallop can bind only one Ca{sup 2+} at the C-terminal EF-hand motif. Recombinant TnC was expressed in Escherichia coli, purified, complexed with a 24-residue synthetic peptide derived from scallop troponin I (TnI) and crystallized. The crystals diffracted X-rays to 1.80 Å resolution and belonged to space group P2{sub 1}2{sub 1}2{sub 1}, with unit-cell parameters a = 32.1, b = 42.2, c = 60.0 Å. The asymmetric unit was assumed to contain one molecular complex of the Akazara scallop TnC C-lobe and TnI fragment, with a Matthews coefficient of 1.83 Å{sup 3} Da{sup −1} and a solvent content of 33.0%.

  15. Arabian Sea

    Atmospheric Science Data Center

    2013-04-16

    ... sometimes results in copious phytoplankton production and oxygen depletion of the subsurface waters. Although red phytoplankton fluorescences have been associated with the low oxygen concentrations in the intermediate and deep waters of the Arabian Sea, ...

  16. Sea Legs

    NASA Astrophysics Data System (ADS)

    Macdonald, Kenneth C.

    Forty-foot, storm-swept seas, Spitzbergen polar bears roaming vast expanses of Arctic ice, furtive exchanges of forbidden manuscripts in Cold War Moscow, the New York city fashion scene, diving in mini-subs to the sea floor hot srings, life with the astronauts, romance and heartbreak, and invading the last bastions of male exclusivity: all are present in this fast-moving, non-fiction account of one woman' fascinating adventures in the world of marine geology and oceanography.

  17. Spectroscopic and ITC study of the conformational change upon Ca{sup 2+}-binding in TnC C-lobe and TnI peptide complex from Akazara scallop striated muscle

    SciTech Connect

    Yumoto, Fumiaki; Tanaka, Hiroyuki; Nagata, Koji; Miyauchi, Yumiko; Miyakawa, Takuya; Ojima, Takao; Tanokura, Masaru

    2008-04-25

    Akazara scallop (Chlamys nipponensis akazara) troponin C (TnC) of striated adductor muscle binds only one Ca{sup 2+} ion at the C-terminal EF-hand motif (Site IV), but it works as the Ca{sup 2+}-dependent regulator in adductor muscle contraction. In addition, the scallop troponin (Tn) has been thought to regulate muscle contraction via activating mechanisms that involve the region spanning from the TnC C-lobe (C-lobe) binding site to the inhibitory region of the TnI, and no alternative binding of the TnI C-terminal region to TnC because of no similarity between second TnC-binding regions of vertebrate and the scallop TnIs. To clarify the Ca{sup 2+}-regulatory mechanism of muscle contraction by scallop Tn, we have analyzed the Ca{sup 2+}-binding properties of the complex of TnC C-lobe and TnI peptide, and their interaction using isothermal titration microcalorimetry, nuclear magnetic resonance, circular dichroism, and gel filtration chromatography. The results showed that single Ca{sup 2+}-binding to the Site IV leads to a structural transition not only in Site IV but also Site III through the structural network in the C-lobe of scallop TnC. We therefore assumed that the effect of Ca{sup 2+}-binding must lead to a change in the interaction mode between the C-lobe of TnC and the TnI peptide. The change should be the first event of the transmission of Ca{sup 2+} signal to TnI in Tn ternary complex.

  18. Sea Ice

    NASA Technical Reports Server (NTRS)

    Perovich, D.; Gerland, S.; Hendricks, S.; Meier, Walter N.; Nicolaus, M.; Richter-Menge, J.; Tschudi, M.

    2013-01-01

    During 2013, Arctic sea ice extent remained well below normal, but the September 2013 minimum extent was substantially higher than the record-breaking minimum in 2012. Nonetheless, the minimum was still much lower than normal and the long-term trend Arctic September extent is -13.7 per decade relative to the 1981-2010 average. The less extreme conditions this year compared to 2012 were due to cooler temperatures and wind patterns that favored retention of ice through the summer. Sea ice thickness and volume remained near record-low levels, though indications are of slightly thicker ice compared to the record low of 2012.

  19. Aral Sea

    NASA Technical Reports Server (NTRS)

    2002-01-01

    This series of MODIS images shows the dwindling Aral Sea. Once one of the world's largest freshwater lakes, the Aral Sea has decreased by as much as 60% over the past few decades due to diversion of the water to grow cotton and rice. These diversion have dropped the lake levels, increased salinity, and nearly decimated the fishing industry. The previous extent of the lake is clearly visible as a whitish perimeter in these image from April 16, May 18, and June 3, 2002. s. Credit: Jacques Descloitres, MODIS Land Rapid Response Team, NASA/GSFC

  20. Black Sea

    NASA Technical Reports Server (NTRS)

    2002-01-01

    The Black Sea in eastern Russia is experiencing an ongoing phytoplankton bloom. This image, the most recent in a series that began in early may, shows the waters to be even more colorful than before. part of the increased brightness may be due to the presence of sun glint , especially in the center of the sea. However, more organisms appear to be present as well, their photosynthetic pigments reflecting different wavelengths of light.This Moderate Resolution Imaging Spectroradiometer (MODIS) image was captured on June 15, 2002.

  1. Genomic in situ hybridization identifies parental chromosomes in hybrid scallop (Bivalvia, Pectinoida, Pectinidae) between female Chlamys farreri and male Argopecten irradians irradians

    PubMed Central

    Huang, Xiaoting; Bi, Ke; Lu, Wei; Wang, Shi; Zhang, Lingling; Bao, Zhenmin

    2015-01-01

    Abstract Interspecific crossing was artificially carried out between Chlamys farreri (Jones & Preston, 1904) ♀ and Argopecten irradians irradians (Lamarck, 1819) ♂, two of the dominant cultivated scallop species in China. Genomic in situ hybridization (GISH) was used to examine the chromosome constitution and variation in hybrids at early embryonic stage. The number of chromosomes in 66.38% of the metaphases was 2n = 35 and the karyotype was 2n = 3 m + 5 sm + 16 st + 11 t. After GISH, two parental genomes were clearly distinguished in hybrids, most of which comprised 19 chromosomes derived from their female parent (Chlamys farreri) and 16 chromosomes from their male parent (Argopecten irradians irradians). Some chromosome elimination and fragmentation was also observed in the hybrids. PMID:26140161

  2. A C-type lectin (AiCTL-3) from bay scallop Argopecten irradians with mannose/galactose binding ability to bind various bacteria.

    PubMed

    Huang, Mengmeng; Song, Xiaoyan; Zhao, Jianmin; Mu, Changkao; Wang, Lingling; Zhang, Huan; Zhou, Zhi; Liu, Xiaolin; Song, Linsheng

    2013-11-15

    C-type lectins are a family of Ca(2+)-dependent carbohydrate-binding proteins playing crucial roles in innate immunity of vertebrates and invertebrates. In the present study, the cDNA of a C-type lectin with one carbohydrate-recognition domain (CRD) of 127 amino acids was cloned from bay scallop Argopecten irradians (designated AiCTL-3) by rapid amplification of cDNA end (RACE) techniques based on expressed sequence tag (EST) analysis. The mRNA transcripts of AiCTL-3 could be detected in all the tested tissues including hepatopancreas, gonad, adductor muscle, heart, hemocytes, mantle and gill, with the highest expression level in hepatopancreas. After the challenges with Vibrio anguillarum and Micrococcus luteus, the mRNA expression level of AiCTL-3 was obviously up-regulated and reached the maximum level at 9h (11.87fold, P<0.01, and 20.02-fold, P<0.05, respectively). The recombinant AiCTL-3 (designated as rAiCTL-3) could bind LPS, PGN, and glucan in vitro, but could not bind mannan. And it also bound Gram-positive bacteria Staphylococcus aureus as well as Gram-negative bacteria Escherichia coli and V. anguillarum. With a Ca(2+) binding site 2 EPN (Glu-Pro-Asn) motif, rAiCTL-3 could bind both mannose and galactose which was quite different from those in vertebrate. Meanwhile, it could significantly enhance the phagocytosis of scallop hemocytes in vitro. The results clearly suggested that AiCTL-3 could serve not only as a PRR participated in the immune response against various PAMPs and bacteria in non-self recognition via mannose/galactose binding specificity but an opsonin playing an important part in clearance of invaders.

  3. Sea Clutter

    DTIC Science & Technology

    1990-09-28

    OE-10, 47i- 476, (1985). 15. S. Tang and 0. H. Shemdin , "Measurement of High-frequency Waves using a Wave Fol- lower," J. Geophys. Res. 88. 9832...DESCRIPTION OF THE SEA SURFACE ................................................................... 2 The Wave Spectrum...Very Low Grazing Angles ......................................................................... 16 At HF and mm- Wave Frequencies

  4. From Sea to Shining Sea

    ERIC Educational Resources Information Center

    Scott, Beverly

    2005-01-01

    Deep down in the depths of the sea, beautiful fish, mysterious ocean life, and unusual plants glimmer and glow in the eerie atmosphere of an ever-changing ocean. This article describes how, with this vision and a purpose in mind, three teachers pulled open classroom walls and joined forces so their second graders could create a mammoth 30 x 75"…

  5. A Silurian sea spider.

    PubMed

    Siveter, Derek J; Sutton, Mark D; Briggs, Derek E G; Siveter, David J

    2004-10-21

    Pycnogonids (sea spiders) are marine arthropods numbering some 1,160 extant species. They are globally distributed in depths of up to 6,000 metres, and locally abundant; however, their typically delicate form and non-biomineralized cuticle has resulted in an extremely sparse fossil record that is not accepted universally. There are two opposing views of their phylogenetic position: either within Chelicerata as sister group to the euchelicerates, or as a sister taxon to all other euarthropods. The Silurian Herefordshire Konservat-Lagerstatte in England (approximately 425 million years (Myr) bp) yields exceptionally preserved three-dimensional fossils that provide unrivalled insights into the palaeobiology of a variety of invertebrates. The fossils are preserved as calcitic void in-fills in carbonate concretions within a volcaniclastic horizon, and are reconstructed digitally. Here we describe a new pycnogonid from this deposit, which is the oldest adult sea spider by approximately 35 Myr and the most completely known fossil species. The large chelate first appendage is consistent with a chelicerate affinity for the pycnogonids. Cladistic analyses place the new species near the base of the pycnogonid crown group, implying that the latter had arisen by the Silurian period.

  6. Melting Ice, Rising Seas

    NASA Video Gallery

    Sea level rise is an indicator that our planet is warming. Much of the world's population lives on or near the coast, and rising seas are something worth watching. Sea level can rise for two reason...

  7. Mammals of the Sea.

    ERIC Educational Resources Information Center

    Naturescope, 1986

    1986-01-01

    Presents information on sea mammals, including definitions and characteristics of cetaceans, pinnipeds, and sirenians. Contains descriptions of the teaching activities "Whale Music,""Draw A Whale to Scale,""Adopt a Sea Mammal," and "Sea Mammal Sleuths." (TW)

  8. Animals of the Seas and Wetlands. Alaska Sea Week Curriculum Series II. Alaska Sea Grant Report 85-11.

    ERIC Educational Resources Information Center

    Mickelson, Belle

    This curriculum guide is the second (Series II) in a six-volume set that comprises the Sea Week Curriculum Series developed in Alaska. This second book in the series lends itself to the first-grade level but can be adapted to preschool, secondary, and adult education. Nine units contain 30 activities with worksheets that cover the following…

  9. Sea Ice

    NASA Technical Reports Server (NTRS)

    Parkinson, Claire L.; Cavalieri, Donald J.

    2005-01-01

    Sea ice covers vast areas of the polar oceans, with ice extent in the Northern Hemisphere ranging from approximately 7 x 10(exp 6) sq km in September to approximately 15 x 10(exp 6) sq km in March and ice extent in the Southern Hemisphere ranging from approximately 3 x 10(exp 6) sq km in February to approximately 18 x 10(exp 6) sq km in September. These ice covers have major impacts on the atmosphere, oceans, and ecosystems of the polar regions, and so as changes occur in them there are potential widespread consequences. Satellite data reveal considerable interannual variability in both polar sea ice covers, and many studies suggest possible connections between the ice and various oscillations within the climate system, such as the Arctic Oscillation, North Atlantic Oscillation, and Antarctic Oscillation, or Southern Annular Mode. Nonetheless, statistically significant long-term trends are also apparent, including overall trends of decreased ice coverage in the Arctic and increased ice coverage in the Antarctic from late 1978 through the end of 2003, with the Antarctic ice increases following marked decreases in the Antarctic ice during the 1970s. For a detailed picture of the seasonally varying ice cover at the start of the 21st century, this chapter includes ice concentration maps for each month of 2001 for both the Arctic and the Antarctic, as well as an overview of what the satellite record has revealed about the two polar ice covers from the 1970s through 2003.

  10. Tempo-spatial variation of nutrient and chlorophyll- α concentrations from summer to winter in the Zhangzi Island Area (Northern Yellow Sea)

    NASA Astrophysics Data System (ADS)

    Yin, Jiehui; Zhao, Zengxia; Zhang, Guangtao; Wang, Shiwei; Wan, Aiyong

    2013-09-01

    Nutrient and Chlorophyll- a (Chl- a) concentrations were investigated monthly along three transects extending from a mariculture area to open waters around the Zhangzi Island area from July to December 2009. The objective of this study is to illustrate food availability to the bottom-sowed scallop Patinopecten yessoensis under the influences of the Yellow Sea Cold Water Mass (YSCWM), freshwater input and feedbacks of cultivated scallops. Significant thermal stratification was present in open waters from July to October, and salinity decreased in July and August in surface layers in the mariculture area. Nutrient concentrations increased with depth in both areas in summer, but were similar through water column in November and December. On average, nutrient increased from summer to autumn in all components except ammonia. Nutrient concentrations lower than the minimum thresholds for phytoplankton growth were present only in upper layers in summer, but stoichiometric nitrogen limitation existed in the entire investigation period. Column-averaged Chl- a concentration was lower in open waters than in mariculture area in all months. It increased significantly in mariculture area in August and October, and was less variable in open waters. Our results show that nutrients limitation to phytoplankton growth is present mainly in upper layer in association with stratification caused by YSCWM in summer. Freshwater input and upwelling of nutrients accumulated in YSCWM can stimulate phytoplankton production in mariculture area. Farming activities may change stoichiometric nutrient ratios but have less influence on Chl- a concentration.

  11. Respiration in Neonate Sea Turtles

    PubMed Central

    Paladino, Frank V.; Strohl, Kingman P.; Pilar Santidrián, T.; Klann, Kenneth; Spotila, James R.

    2007-01-01

    The pattern and control of respiration is virtually unknown in hatchling sea turtles. Using incubator-raised turtles, we measured oxygen consumption, frequency, tidal volume, and minute volume for leatherback (Dermochelys coriacea) and olive ridley (Lepidochelys olivacea) turtle hatchlings for the first six days after pipping. In addition, we tested the hatchlings’ response to hypercapnic, hyperoxic, and hypoxic challenges over this time period. Hatchling sea turtles generally showed resting ventilation characteristics that are similar to those of adults: a single breath followed by a long respiratory pause, slow frequency, and high metabolic rate. With hypercapnic challenge, both species responded primarily by elevating respiratory frequency via a decrease in the non-ventilatory period. Leatherback resting tidal volume increased with age but otherwise, neither species’ resting respiratory pattern nor response to gas challenge changed significantly over the first few days after hatching. At the time of nest emergence, sea turtles have achieved a respiratory pattern that is similar to that of actively diving adults. PMID:17258487

  12. Orientation and open-sea navigation in sea turtles

    PubMed

    Lohmann; Lohmann

    1996-01-01

    Loggerhead sea turtle hatchlings (Caretta caretta L.) emerge from underground nests, scramble to the sea and begin a transoceanic migration by swimming away from their natal beach and into the open ocean. Evidence suggests that hatchlings sequentially use three different sets of cues to maintain orientation during their initial migration offshore. While on the beach, hatchlings find the ocean by crawling towards the lower, brighter seaward horizon and away from the dark, elevated silhouettes of vegetation and dunes. Upon entering the ocean, turtles initially orient seawards by swimming into waves, which can be detected as orbital movements from under water. Laboratory experiments have demonstrated that turtles can transfer a course initiated on the basis of waves or visual cues to a course mediated by a magnetic compass. Thus, by setting a magnetic course on the basis of nearshore cues that indicate the seaward direction, hatchlings may continue on offshore headings after entering deep water beyond sight of land. Sea turtles may use the earth's magnetic field not only as a cue for compass orientation but also as a source of world-wide positional information. Recent experiments have demonstrated that loggerheads can detect subtle differences in magnetic field inclination and intensity, two geomagnetic features that vary across the surface of the earth. Because most nesting beaches and oceanic regions are marked by a unique combination of these features, these findings raise the possibility that adult sea turtles navigate using a bicoordinate magnetic map.

  13. Pycnogonids associated with the giant lion´s-paw scallop Nodipecten subnodosus (Sowerby) in Ojo de Liebre Bay, Guerrero Negro, Baja California Sur, Mexico

    PubMed Central

    de León-Espinosa, Angel; de León-González, Jesus A.

    2015-01-01

    Abstract Five species of epibenthic pycnogonids collected on the giant lion´s-paw scallop Nodipecten subnodosus are recorded. A new species of Eurycyde, Eurycyde bamberi, is described. Of the 19 species known in this genus; the new species is closest to Eurycyde hispida Kroyer, 1844 but differs from it in the absence of plumose spines and the shapes of the lateral process, first coxa, and ocular tubercle. The new species represents the third member of Eurycyde from the eastern Pacific in addition to Eurycyde spinosa Hilton, 1916 and Eurycyde clitellaria Stock, 1955. Besides Eurycyde bamberi, the following species were collected: Nymphopsis duodorsospinosa Hilton, 1942c; Callipallene californiensis (Hall, 1913); Nymphon lituus Child, 1979; and Pycnogonum rickettsi Schmitt, 1934. Pycnogonum rickettsi is recorded for first time from Mexican waters, as is Nymphon lituus from the western coast of Baja California Peninsula. Each of these four species are re-described and re-illustrated in order to fill in existing gaps in the literature of the region. PMID:26692802

  14. Demonstration of nutrient pathway from the digestive system to oocytes in the gonad intestinal loop of the scallop Pecten maximus L.

    PubMed

    Beninger, Peter G; Le Pennec, Gaël; Le Pennec, Marcel

    2003-08-01

    The mechanism of nutrient transfer from the digestive system to the gonad acini and developing oocytes was investigated in the gonad-intestinal loop system of the queen scallop Pecten maximus L. Ferritin was injected directly into the purged intestine of specimens from the wild. Subsequently, a histochemical reaction and transmission electron microscopy were used to localize ferritin in various cell types. Ferritin was rapidly absorbed by the intestinal epithelium, and then appeared in hemocytes in the surrounding connective tissue. In the hemocytes, ferritin was stored in variously sized inclusions, as well as in the general cytoplasm. In all sections examined for the 12 experimental individuals, hemocytes were always found in association with connective tissue fibers extending from the base of the intestinal epithelium to gonad acini. After 30-min incubation, ferritin appeared inside the acini of all individuals. Ferritin-bearing cells were rarely found in association with male acini or gametes, nor with mature female gametes, but often with developing female gametes. Not all individuals showed the same temporal dynamics of ferritin transport, suggesting that nutrient transfer to oocytes is either not a continuous process, or that among individuals, transfer is not synchronized on short time scales. This is the first demonstration of a pathway of nutrient transfer from the intestine, and more generally the digestive system, to developing oocytes in the Bivalvia.

  15. Specific pathways for the incorporation of dissolved barium and molybdenum into the bivalve shell: an isotopic tracer approach in the juvenile Great Scallop (Pecten maximus).

    PubMed

    Tabouret, Hélène; Pomerleau, Sébastien; Jolivet, Aurélie; Pécheyran, Christophe; Riso, Ricardo; Thébault, Julien; Chauvaud, Laurent; Amouroux, David

    2012-07-01

    Dissolved barium and molybdenum incorporation in the calcite shell was investigated in the Great Scallop Pecten maximus. Sixty six individuals were exposed for 16 days to two successive dissolved Ba and Mo concentrations accurately differentiated by two different isotopic enrichments (⁹⁷Mo, ⁹⁵Mo; ¹³⁵Ba, ¹³⁷Ba). Soft tissue and shell isotopic composition were determined respectively by quantitative ICP-MS (Inductively Coupled Plasma Mass Spectrometer) and laser ablation--ICP-MS. Results from Ba enrichment indicate the direct incorporation of dissolved Ba into the shell in proportion to the levels in the water in which they grew with a 6-8 day delay. The low spike contributions and the low partition coefficient (D(Mo) = 0.0049 ± 0.0013), show that neither the soft tissue nor the shell were significantly sensitive to Mo enrichment. These results eliminate direct Mo shell enrichment by the dissolved phase, and favour a trophic uptake that will be investigated using the successive isotopic enrichment approach developed in this study.

  16. The Drosophila wing differentiation factor vestigial-scalloped is required for cell proliferation and cell survival at the dorso-ventral boundary of the wing imaginal disc.

    PubMed

    Delanoue, R; Legent, K; Godefroy, N; Flagiello, D; Dutriaux, A; Vaudin, P; Becker, J L; Silber, J

    2004-01-01

    Links between genes involved in development, proliferation and apoptosis have been difficult to establish. In the Drosophila wing disc, the vestigial (vg) and the scalloped (sd) gene products dimerize to form a functional transcription factor. Ectopic expression of vg in other imaginal discs induces outgrowth and wing tissue specification. We investigated the role of the VG-SD dimer in proliferation and showed that vg antagonizes the effect of dacapo, the cyclin-cdk inhibitor. Moreover, ectopic vg drives cell cycle progression and in HeLa cultured cells, the VG-SD dimer induces cell proliferation per se. In Drosophila, ectopic vg induces expression of dE2F1 and its targets dRNR2 and string. In addition vg, but not dE2F1, interacts with and induces expression of dihydrofolate reductase (DHFR). Moreover, a decrease in VG or addition of aminopterin, a specific DHFR inhibitor, shift the dorso-ventral boundary cells of the disc to a cell death sensitive state that is correlated with reaper induction and DIAP1 downregulation. This indicates that vg in interaction with dE2F1 and DHFR is a critical player for both cell proliferation and cell survival in the presumptive wing margin area.

  17. Polymyositis - adult

    MedlinePlus

    ... rash is a sign of a similar condition, dermatomyositis . Common symptoms include: Muscle weakness in the shoulders ... in the treatment of refractory adult and juvenile dermatomyositis and adult polymyositis: a randomized, placebo-phase trial. ...

  18. Colorful Underwater Sea Creatures

    ERIC Educational Resources Information Center

    McCutcheon, Heather

    2011-01-01

    In this article, the author describes a project wherein students created colorful underwater sea creatures. This project began with a discussion about underwater sea creatures and how they live. The first step was making the multi-colored tissue paper that would become sea creatures and seaweed. Once students had the shapes of their sea creatures…

  19. Beaufort Sea: information update

    SciTech Connect

    Becker, P.R.

    1988-04-01

    The report is based on a multi-disciplinary meeting held March 6-7, 1985, as part of preparations for the Beaufort Sea Sale 97. The chapters are based on presentations given: The causeway effect: Modification of nearshore thermal regime resulting from causeways; Summertime sea ice intrusions in the Chukchi Sea; The deepwater limit of ice gouging on the Beaufort Sea shelf; Distribution, abundance, migration, harvest, and stock identity of Belukha Whales in the Beaufort Sea; Ringed seals in the Beaufort Sea; Beaufort Sea socioeconomics; The Baffin Island Oil Spill, (BIOS) Project.

  20. 50 CFR 648.62 - Northern Gulf of Maine (NGOM) Management Program.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... Management Measures for the Atlantic Sea Scallop Fishery § 648.62 Northern Gulf of Maine (NGOM) Management... boundaries of the Gulf of Maine Scallop Dredge Exemption Area as specified in § 648.80(a)(11). To fish for or... issued a scallop permit pursuant to § 648.4(a)(2) may possess, retain, or land scallops in the...

  1. Fish and Fisheries. Alaska Sea Week Curriculum Series VI. Alaska Sea Grant Report 83-7.

    ERIC Educational Resources Information Center

    Mickelson, Belle; Barr, Nancy

    This curriculum guide is the fifth (Series VI) in a six-volume set that comprises the Sea Week Curriculum Series developed in Alaska. The book lends itself to the fifth-grade level but can be adapted to preschool, secondary, and adult education. Seven units contain 48 activities with worksheets that cover the following topics: (1) fish, their…

  2. Discovery: An Introduction. Alaska Sea Week Curriculum Series. Alaska Sea Grant Report 83-6.

    ERIC Educational Resources Information Center

    Mickelson, Belle; And Others

    This curriculum guide is the first (Series I) in a six-volume set that comprises the Sea Week Curriculum Series developed in Alaska. As a basic introduction, this first book in the series lends itself to the kindergarten level but can be adapted to preschool, secondary, and adult education. Six units contain 32 activities with worksheets that…

  3. Shells and Insects. Alaska Sea Week Curriculum Series III. Alaska Sea Grant Report 84-4.

    ERIC Educational Resources Information Center

    Kelsey, Claudia; And Others

    This curriculum guide is the third (Series III) in a six-volume set that comprises the Sea Week Curriculum Series developed in Alaska. The book lends itself to the second-grade level but can be adapted to preschool, secondary, and adult education. Ten units contain 77 activities with worksheets that cover the following topics: (1) introduction to…

  4. Liquid chromatographic post-column oxidation method for analysis of paralytic shellfish toxins in mussels, clams, scallops, and oysters: single-laboratory validation.

    PubMed

    Van de Riet, Jeffrey M; Gibbs, Ryan S; Chou, Faith W; Muggah, Patricia M; Rourke, Wade A; Burns, Garth; Thomas, Krista; Quilliam, Michael A

    2009-01-01

    A single-laboratory validation study was conducted for the LC post-column oxidation analysis of paralytic shellfish toxins (PST): saxitoxin (STX); neosaxitoxin (NEO); gonyautoxins (GTX) 1-5; decarbamoyl gonyautoxins (dcGTX) 2 and 3; decarbamoyl saxitoxin (dcSTX); and N-sulfocarbamoyl-gonyautoxin-2 and 3 (C1 and C2) in mussels (Mytilus edulis), soft shell clams (Mya arenaria), scallops (Placopectin magellanicus), and oysters (Crassostrea virginicus). The instrumental technique was developed for the analysis of PST in shellfish as an alternative to the precolumn oxidation method, AOAC Official Method 2005.06, and a replacement for the current AOAC biological method 959.08. The method used reversed-phase LC with post-column oxidation and fluorescence detection. Test materials for method recovery were prepared by fortification of blank material with a cocktail of PST. Materials used to determine method repeatability and intermediate precision were prepared by blending blank material with naturally incurred material. The target total toxicity levels evaluated in the study were 0.40, 0.80, and 1.60 mg STX x diHCl equivalents per kilogram [(eq/kg) 1%, 1, and 2 times the regulatory limit]. Linearity, recovery, and within-laboratory precision parameters of the method were evaluated. Correlation coefficients of the calibration curves for all toxins studied were > 0.99. Total toxin recovery ranged from 94 to 106% at the three levels of interest. Repeatability and intermediate precision RSD ranged from 2 to 7% and 2 to 8%, respectively. The method LOD and LOQ (assuming the presence of all toxins) were determined to be equivalent to 0.18 and 0.39 mg STX x diHCl eq/kg. The method is intended for a regulatory framework and will be submitted for an AOAC collaborative study.

  5. The detoxification responses, damage effects and bioaccumulation in the scallop Chlamys farreri exposed to single and mixtures of benzo[a]pyrene and chrysene.

    PubMed

    Guo, Ruiming; Pan, Luqing; Lin, Pengfei; Zheng, Lei

    2017-01-01

    This study aimed to investigate the detoxification responses, damage effects and biotransformation in scallop Chlamys farreri exposed to benzo[a]pyrene (BaP) (0.1, 1μg/L), chrysene (CHR) (0.1, 1μg/L) and BaP+CHR (0.1+0.1, 1+1μg/L) for 15days. Results demonstrated that BaP and CHR concentration (BaP

  6. Learning & Knowledge Production in North Carolina Sea Turtle Conservation Communities of Practice

    ERIC Educational Resources Information Center

    Martin, Kathleen Carol

    2010-01-01

    This dissertation focused upon non-formal and informal learning practices and knowledge production amongst [adult] participants involved in local sea turtle conservation practices along the US Atlantic coast. In the United States, adult learning and adult education has historically occurred within non-formal settings (e.g., through community-based…

  7. Aral Sea basin: a sea dies, a sea also rises.

    PubMed

    Glantz, Michael H

    2007-06-01

    The thesis of this article is quite different from many other theses of papers, books, and articles on the Aral Sea. It is meant to purposely highlight the reality of the situation in Central Asia: the Aral Sea that was once a thriving body of water is no more. That sea is dead. What does exist in its place are the Aral seas: there are in essence three bodies of water, one of which is being purposefully restored and its level is rising (the Little Aral), and two others which are still marginally connected, although they continue to decline in level (the Big Aral West and the Big Aral East). In 1960 the level of the sea was about 53 m above sea level. By 2006 the level had dropped by 23 m to 30 m above sea level. This was not a scenario generated by a computer model. It was a process of environmental degradation played out in real life in a matter of a few decades, primarily as a result of human activities. Despite wishes and words to the contrary, it will take a heroic global effort to save what remains of the Big Aral. It would also take a significant degree of sacrifice by people and governments in the region to restore the Big Aral to an acceptable level, given that the annual rate of flow reaching the Amudarya River delta is less than a 10th of what it was several decades ago. Conferring World Heritage status to the Aral Sea(s) could spark restoration efforts for the Big Aral.

  8. 7 CFR 1437.310 - Sea grass and sea oats.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 7 Agriculture 10 2014-01-01 2014-01-01 false Sea grass and sea oats. 1437.310 Section 1437.310... Determining Coverage Using Value § 1437.310 Sea grass and sea oats. (a) Sea grass and sea oats are value loss... boundaries; and (3) Be managed and maintained using acceptable growing practices for the geographical...

  9. 7 CFR 1437.310 - Sea grass and sea oats.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 7 Agriculture 10 2011-01-01 2011-01-01 false Sea grass and sea oats. 1437.310 Section 1437.310... Determining Coverage Using Value § 1437.310 Sea grass and sea oats. (a) Sea grass and sea oats are value loss... boundaries; and (3) Be managed and maintained using acceptable growing practices for the geographical...

  10. 7 CFR 1437.310 - Sea grass and sea oats.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 10 2010-01-01 2010-01-01 false Sea grass and sea oats. 1437.310 Section 1437.310... Determining Coverage Using Value § 1437.310 Sea grass and sea oats. (a) Sea grass and sea oats are value loss... boundaries; and (3) Be managed and maintained using acceptable growing practices for the geographical...

  11. 7 CFR 1437.310 - Sea grass and sea oats.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 7 Agriculture 10 2013-01-01 2013-01-01 false Sea grass and sea oats. 1437.310 Section 1437.310... Determining Coverage Using Value § 1437.310 Sea grass and sea oats. (a) Sea grass and sea oats are value loss..., as determined by CCC. (e) The land, waterbed, or facility in which the eligible commodity was...

  12. 7 CFR 1437.310 - Sea grass and sea oats.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 7 Agriculture 10 2012-01-01 2012-01-01 false Sea grass and sea oats. 1437.310 Section 1437.310... Determining Coverage Using Value § 1437.310 Sea grass and sea oats. (a) Sea grass and sea oats are value loss..., as determined by CCC. (e) The land, waterbed, or facility in which the eligible commodity was...

  13. 50 CFR 648.10 - VMS and DAS requirements for vessel owners/operators.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... scallop vessel issued an Occasional limited access permit when fishing under the Sea Scallop Area Access... Atlantic sea scallop limited access permit, the vessel owner signs out of the VMS program for a minimum..., or while the vessel was not at sea. (e) VMS notifications—(1) VMS installation notification. (i)...

  14. 50 CFR 648.10 - VMS and DAS requirements for vessel owners/operators.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... scallop vessel issued an Occasional limited access permit when fishing under the Sea Scallop Area Access... Atlantic sea scallop limited access permit, the vessel owner signs out of the VMS program for a minimum..., or while the vessel was not at sea. (e) VMS notifications—(1) VMS installation notification. (i)...

  15. 50 CFR 648.10 - VMS and DAS requirements for vessel owners/operators.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... scallop vessel issued an Occasional limited access permit when fishing under the Sea Scallop Area Access... Atlantic sea scallop limited access permit, the vessel owner signs out of the VMS program for a minimum..., or while the vessel was not at sea. (e) VMS notifications—(1) VMS installation notification. (i)...

  16. 50 CFR 648.14 - Prohibitions.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... purpose; or attempt to transfer, remove, land, or offload, for a commercial purpose; at sea, any species... boundaries of a Sea Scallop Access Area by a vessel that is declared into the Area Access Program as specified in § 648.60. (E) Fish for, possess, or land scallops in or from any Sea Scallop Access...

  17. 50 CFR 648.14 - Prohibitions.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... purpose; or attempt to transfer, remove, land, or offload, for a commercial purpose; at sea, any species...) of in-shell scallops outside the boundaries of a Sea Scallop Access Area by a vessel that is declared... in § 648.52(d), outside the boundaries of a Sea Scallop Access Area by a vessel that is declared...

  18. 50 CFR 648.10 - VMS and DAS requirements for vessel owners/operators.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... scallop vessel issued an Occasional limited access permit when fishing under the Sea Scallop Area Access... Atlantic sea scallop limited access permit, the vessel owner signs out of the VMS program for a minimum..., or while the vessel was not at sea. (e) VMS notifications—(1) VMS installation notification. (i)...

  19. Deep sea waste disposal

    SciTech Connect

    Kester, D.R.; Burt, W.V.; Capuzzo, J.M.; Park, P.K.; Ketchum, B.W.; Duedall, I.W.

    1985-01-01

    The book presents papers on the marine disposal of wastes. Topics considered include incineration at sea, the modelling and biological effects of industrial wastes, microbial studies of ocean dumping, deep-sea mining wastes, the chemical analysis of ferromanganese nodules, and economic aspects of deep-sea disposal.

  20. All That Unplowed Sea

    ERIC Educational Resources Information Center

    MOSAIC, 1975

    1975-01-01

    Hunting and gathering at sea may fast be approaching their productive limits. Aquaculture - farming at sea - linked to conservation represents the sea's promise. If the system works, it might prove to be the key to supplying large amounts of food and fresh water at no cost in nonrenewable energy resources. (BT)

  1. The Caspian Sea Environment

    NASA Astrophysics Data System (ADS)

    Kostianoy, Andrey; Kosarev, A.

    The systematic description of the knowledge accumulated on the physical oceanography, marine chemistry and pollution, and marine biology of the Caspian Sea forms the basis of this book. It presents the principal characteristic features of the environmental conditions of the sea and their changes in the second half of the 20th century. At present, the principal problems of the Caspian Sea are related to the interannual sea level changes and their forecast and to the estimation of the intensity of the chemical pollution of the sea and its impact upon the biota.

  2. Bartonella spp. exposure in northern and southern sea otters in Alaska and California.

    PubMed

    Carrasco, Sebastian E; Chomel, Bruno B; Gill, Verena A; Doroff, Angela M; Miller, Melissa A; Burek-Huntington, Kathleen A; Kasten, Rickie W; Byrne, Barbara A; Goldstein, Tracey; Mazet, Jonna A K

    2014-12-01

    Since 2002, an increased number of northern sea otters (Enhydra lutris kenyoni) from southcentral Alaska have been reported to be dying due to endocarditis and/or septicemia with infection by Streptococcus infantarius subsp. coli. Bartonella spp. DNA was also detected in northern sea otters as part of mortality investigations during this unusual mortality event (UME) in Kachemak Bay, Alaska. To evaluate the extent of exposure to Bartonella spp. in sea otters, sera collected from necropsied and live-captured northern sea otters, as well as necropsied southern sea otters (Enhydra lutris nereis) unaffected by the UME, were analyzed using an immunofluorescent antibody assay. Antibodies against Bartonella spp. were detected in sera from 50% of necropsied and 34% of presumed healthy, live-captured northern sea otters and in 16% of necropsied southern sea otters. The majority of sea otters with reactive sera were seropositive for B. washoensis, with antibody titers ranging from 1:64 to 1:256. Bartonella spp. antibodies were especially common in adult northern sea otters, both free-living (49%) and necropsied (62%). Adult stranded northern sea otters that died from infectious causes, such as opportunistic bacterial infections, were 27 times more likely to be Bartonella seropositive than adult stranded northern sea otters that died from noninfectious causes (p<0.001; 95% confidence interval 2.62-269.4). Because Bartonella spp. antibodies were detected in necropsied northern sea otters from southcentral (44%) and southwestern (86%) stocks of Alaska, as well as in necropsied southern sea otters (16%) in southcentral California, we concluded that Bartonella spp. exposure is widely distributed among sea otter populations in the Eastern Pacific, providing context for investigating future disease outbreaks and monitoring of Bartonella infections for sea otter management and conservation.

  3. Bartonella spp. Exposure in Northern and Southern Sea Otters in Alaska and California

    PubMed Central

    Chomel, Bruno B.; Gill, Verena A.; Doroff, Angela M.; Miller, Melissa A.; Burek-Huntington, Kathleen A.; Kasten, Rickie W.; Byrne, Barbara A.; Goldstein, Tracey; Mazet, Jonna A.K.

    2014-01-01

    Abstract Since 2002, an increased number of northern sea otters (Enhydra lutris kenyoni) from southcentral Alaska have been reported to be dying due to endocarditis and/or septicemia with infection by Streptococcus infantarius subsp. coli. Bartonella spp. DNA was also detected in northern sea otters as part of mortality investigations during this unusual mortality event (UME) in Kachemak Bay, Alaska. To evaluate the extent of exposure to Bartonella spp. in sea otters, sera collected from necropsied and live-captured northern sea otters, as well as necropsied southern sea otters (Enhydra lutris nereis) unaffected by the UME, were analyzed using an immunofluorescent antibody assay. Antibodies against Bartonella spp. were detected in sera from 50% of necropsied and 34% of presumed healthy, live-captured northern sea otters and in 16% of necropsied southern sea otters. The majority of sea otters with reactive sera were seropositive for B. washoensis, with antibody titers ranging from 1:64 to 1:256. Bartonella spp. antibodies were especially common in adult northern sea otters, both free-living (49%) and necropsied (62%). Adult stranded northern sea otters that died from infectious causes, such as opportunistic bacterial infections, were 27 times more likely to be Bartonella seropositive than adult stranded northern sea otters that died from noninfectious causes (p<0.001; 95% confidence interval 2.62–269.4). Because Bartonella spp. antibodies were detected in necropsied northern sea otters from southcentral (44%) and southwestern (86%) stocks of Alaska, as well as in necropsied southern sea otters (16%) in southcentral California, we concluded that Bartonella spp. exposure is widely distributed among sea otter populations in the Eastern Pacific, providing context for investigating future disease outbreaks and monitoring of Bartonella infections for sea otter management and conservation. PMID:25514118

  4. Dust Storm, Aral Sea

    NASA Technical Reports Server (NTRS)

    2002-01-01

    The Aral Sea has shrunk to less than half its size since 1985. The Aral Sea receives little water (sometimes no water) from the two major rivers that empty into it-the Syr Darya and Amu Darya. Instead, the river water is diverted to support irrigation for the region's extensive cotton fields. Recently, water scarcity has increased due to a prolonged drought in Central Asia. As the Aral Sea recedes, its former sea bed is exposed. The Aral's sea bed is composed of fine sediments-including fertilizers and other agricultural chemicals-that are easily picked up by the region's strong winds, creating thick dust storms. The International Space Station crew observed and recorded a large dust storm blowing eastward from the Aral Sea in late June 2001. This image illustrates the strong coupling between human activities (water diversions and irrigation), and rapidly changing land, sea and atmospheric processes-the winds blow across the

  5. Chemosterilization of the sea lamprey (Petromyzon marinus)

    USGS Publications Warehouse

    Hanson, Lee H.; Manion, Patrick J.

    1978-01-01

    The chemical, P,P-bis(1-aziridinyl)-N-methylphosphinothioic amide (bisazir), was found in laboratory studies to be an effective sterilant for both sexes of adult sea lampreys (Petromyzon marinus) when given intraperitoneally at a dosage of 100 mg per kilogram of body weight. A total of 300 normal spawning-run sea lampreys and 300 injected with bisazir were released into the Big Garlic River, Marquette County, Michigan, (a small stream divided into five sections by natural barriers), to determine the effect of bisazir on the nesting and spawning behavior of the adults and on the production of larvae. The lampreys constructed and spawned in 95 nests. Sterile adults showed no abnormal nest building or spawning behavior. Sterile males competed effectively with normal males for females. Egg samples taken from nests indicated that eggs in nests where sterile males spawned with sterile or normal females did not hatch, although some embryonic development occurred. Extensive surveys with electric shockers produced no larvae in stream sections where sterile males spawned, but yielded numerous larvae in sections where normal males spawned with normal females. These findings suggest that the release of sterile males may be an effective tool in an integrated approach to control of sea lampreys in the Great Lakes.

  6. CPR: Adult

    MedlinePlus

    Refresher Center Home FIRST AID, CPR and AED LIFEGUARDING Refresher Putting It All Together: CPR—Adult (2:03) Refresher videos only utilize this player QUICK LINKS Home RedCross.org Purchase Course ...

  7. Hydrodynamics of a Digitized Adult Humpback Whale Flipper

    NASA Astrophysics Data System (ADS)

    Fassmann, Wesley N.; McDonald, Samuel J.; Thomson, Scott L.; Fish, Frank E.

    2013-11-01

    During feeding, humpback whales turn with a turn radius of up to 1 /6th of their length towards schools of fish enclosed by bubble nets. This high maneuverability requirement is facilitated by high aspect ratio flippers with leading edge tubercles that delay stall. Previous experimental and computational studies have used idealized models, such as airfoils with scalloped leading edges, to explore the influence of leading edge tubercles on boundary layer separation, vortex generation, and airfoil lift and drag characteristics. Owing to the substantial size of the flipper, no studies have been performed on a digitized adult humpback flipper with real geometry. In this study the hydrodynamics of a realistic humpback flipper model were explored. The model was developed by digitizing a sequence of 18 images circumscribing the suspended flipper of a beached humpback whale. A physical prototype was constructed based on the resulting 3D model, along with a complementary model with the tubercles removed. Experimentally-obtained measurements of lift and drag were used to study the influence of the tubercles. In the presentation, digitization and flow measurement methods are described, and the flow data and results are presented and discussed.

  8. East Siberian Sea, Russia

    NASA Technical Reports Server (NTRS)

    2002-01-01

    The winter sea ice in the east Siberian Sea is looking a bit like a cracked windshield in these true-color Moderate Resolution Imaging Spectroradiometer (MODIS) images from June 16 and 23, 2002. North of the thawing tundra, the sea ice takes on its cracked, bright blue appearance as it thins, which allows the reflection of the water to show through. Numerous still-frozen lakes dot the tundra. Credit: Jacques Descloitres, MODIS Land Rapid Response Team, NASA/GSFC

  9. Climatotherapy at the dead sea for pediatric-onset psoriasis vulgaris.

    PubMed

    Ben-Amitai, Dan; David, Michael

    2009-01-01

    Climatotherapy at the Dead Sea is highly effective and safe for the treatment of psoriasis vulgaris in adults. We examine the efficacy and safety of climatotherapy at the Dead Sea in children with psoriasis vulgaris. More than 75% improvement in the Psoriasis Area and Severity Index was noted in 35.3% of the patients. None of the patients had side effects.

  10. Spatial habitat use patterns of sea otters in coastal washington

    USGS Publications Warehouse

    Laidre, K.L.; Jameson, R.J.; Gurarie, E.; Jeffries, S.J.; Allen, H.

    2009-01-01

    Sea otter (Enhydra lutris kenyoni) movements, home range, and activity budgets were described from data collected during very-high-frequency radiotelemetry studies of 75 individuals on the outer coast of Washington State between 1992 and 1999. Sea otters were located at least once per week from 22 accessible sites along the coast. Over the 7-year study period, range expansion occurred from the core range north and east into the Strait of Juan de Fuca (SJF) as well as southward on the outer coast. Forty-three percent of the sea otters moved into the SJF at least once, most often in winter, using habitat that had not been occupied by sea otters since their extirpation 100 years ago. All sea otters spent portions of their time in the vicinity of Cape Alava, and many animals demonstrated consistent periodic seasonal shifts between specific portions of the coastline over several years. Ninety-five percent annual linear home ranges differed between sex and age classes. Adult males used the largest amount of coastline (50 km ?? 9 5D) and subadult females used the least (24 ?? 9 km). Both adult males and females demonstrated high seasonal periodicity in range use in summer and winter. Twenty-four-hour time budgets in the core portion of the range revealed on average sea otters spent 41% ?? 14% SD of the time foraging and 45% ?? 13% of the time resting (age and sex classes pooled). Adult and subadult female sea otters were most frequently found resting and foraging close to shore ( 1,000 m offshore and at depths between 10 and 30 m. Given current rates of population growth and observed mobility, sea otters in Washington have high potential for range expansion into unoccupied habitat such as Grays Harbor, Willapa Bay, the SJF, or along Vancouver Island. ?? 2009 American Society of Mammalogists.

  11. Pelagic sea snakes dehydrate at sea

    PubMed Central

    Lillywhite, Harvey B.; Sheehy, Coleman M.; Brischoux, François; Grech, Alana

    2014-01-01

    Secondarily marine vertebrates are thought to live independently of fresh water. Here, we demonstrate a paradigm shift for the widely distributed pelagic sea snake, Hydrophis (Pelamis) platurus, which dehydrates at sea and spends a significant part of its life in a dehydrated state corresponding to seasonal drought. Snakes that are captured following prolonged periods without rainfall have lower body water content, lower body condition and increased tendencies to drink fresh water than do snakes that are captured following seasonal periods of high rainfall. These animals do not drink seawater and must rehydrate by drinking from a freshwater lens that forms on the ocean surface during heavy precipitation. The new data based on field studies indicate unequivocally that this marine vertebrate dehydrates at sea where individuals may live in a dehydrated state for possibly six to seven months at a time. This information provides new insights for understanding water requirements of sea snakes, reasons for recent declines and extinctions of sea snakes and more accurate prediction for how changing patterns of precipitation might affect these and other secondarily marine vertebrates living in tropical oceans. PMID:24648228

  12. Pelagic sea snakes dehydrate at sea.

    PubMed

    Lillywhite, Harvey B; Sheehy, Coleman M; Brischoux, François; Grech, Alana

    2014-05-07

    Secondarily marine vertebrates are thought to live independently of fresh water. Here, we demonstrate a paradigm shift for the widely distributed pelagic sea snake, Hydrophis (Pelamis) platurus, which dehydrates at sea and spends a significant part of its life in a dehydrated state corresponding to seasonal drought. Snakes that are captured following prolonged periods without rainfall have lower body water content, lower body condition and increased tendencies to drink fresh water than do snakes that are captured following seasonal periods of high rainfall. These animals do not drink seawater and must rehydrate by drinking from a freshwater lens that forms on the ocean surface during heavy precipitation. The new data based on field studies indicate unequivocally that this marine vertebrate dehydrates at sea where individuals may live in a dehydrated state for possibly six to seven months at a time. This information provides new insights for understanding water requirements of sea snakes, reasons for recent declines and extinctions of sea snakes and more accurate prediction for how changing patterns of precipitation might affect these and other secondarily marine vertebrates living in tropical oceans.

  13. SeaQuaKE: Sea-optimized Quantum Key Exchange

    DTIC Science & Technology

    2014-11-01

    SeaQuaKE: Sea-optimized Quantum Key Exchange Technical Progress Report No. 3 Prepared for: Office...From - To) September 2014  November 2014 4. TITLE AND SUBTITLE SeaQuaKE: Sea-optimized Quantum Key Exchange Technical Progress Report No. 1...ONRBAA13-001 14. ABSTRACT This is the 3rd quarterly Technical Progress Report summarizing progress on the Sea-optimized Quantum Key Exchange (SeaQuaKE

  14. Damage sustained by epibenthic invertebrates discarded in the Nephrops fishery of the Clyde Sea area, Scotland

    NASA Astrophysics Data System (ADS)

    Bergmann, M.; Beare, D. J.; Moore, P. G.

    2001-05-01

    The Clyde Sea Nephrops fishery produces ca. 25 000 t y -1 discards with invertebrates accounting for up to 90% of the number of animals discarded. Trawling and handling of the (by-)catch often results in physical injury, the extent of which was previously unknown. Damage sustained by invertebrate discards was assessed following commercial trawling (of 62-270 min duration) and sorting on deck. Brittlestars Ophiura ophiura were most vulnerable with 100% incurring damage, followed by squat lobsters Munida rugosa (57%) and starfish Astropecten irregularis (56%). Harder-shelled species such as hermit crabs Pagurus bernhardus and queen scallops Aequipecten opercularis sustained fewer injuries (14 and 2%, respectively). Shell chipping, loss and damage of limbs were the most frequent types of injury incurred. The severity and frequency of damage was mainly correlated with species-specific morphological and behavioural characteristics. Vessel type, tow duration and animal size had a major influence on damage to the epibenthic invertebrates caught. While damage may potentially be repaired, survival is adversely affected and sublethal effects might significantly impair fitness of frequently trawled individuals and populations.

  15. Neptuniibacter pectenicola sp. nov. and Neptuniibacter marinus sp. nov., two novel species isolated from a Great scallop (Pecten maximus) hatchery in Norway and emended description of the genus Neptuniibacter.

    PubMed

    Diéguez, Ana L; Balboa, Sabela; Magnesen, Thorolf; Romalde, Jesús L

    2017-03-01

    Nine isolates obtained from a great scallop hatchery in Norway were characterized using a polyphasic approach. Strains were Gram-negative, aerobic and motile rods with oxidative metabolism. Phylogenetic analysis based on the sequences of 16S rRNA and rpoB genes showed that these strains formed two different groups associated with members of the genus Neptuniibacter. DNA-DNA hybridization (DDH) and Average Nucleotide Identity (ANI) demonstrated that the isolates constituted two novel species of this genus, which can be phenotypically differentiated from their closest relatives. The names Neptuniibacter marinus sp. nov. and Neptuniibacter pectenicola sp. nov are proposed, with ATR 1.1(T) (=CECT 8938(T)=DSM 100783(T)) and LFT 1.8(T) (=CECT 8936(T)=DSM 100781(T)) as respective type strains.

  16. Performance Characteristics of AOAC Method 2005.06 for the Determination of Paralytic Shellfish Toxins in Manila Clams, European Otter Clams, Grooved Carpet Shell Clams, Surf Clams, and Processed King Scallops.

    PubMed

    O'Neill, Alison; Turner, Andrew D

    2015-01-01

    An approach was developed for the verification of method performance of the AOAC 2005.06 LC-fluorescence detector (FLD) method for determination of paralytic shellfish poisoning (PSP) toxins in bivalve shellfish. This was developed following advice published by the Analytical Laboratory Accreditation Criteria Committee and applied to shellfish species that had not been previously subjected to a full single-laboratory validation scheme. The refined approach was developed following the need to assess performance in a number of shellfish species infrequently monitored through the UK statutory monitoring program, while reducing the impact and cost of the studies, most notably in terms of the use of valuable reference standards. The species assessed were manila clams (Ruditapes philippinarum), European otter clams (Lutraria lutraria), grooved carpet shell clams (R. decussatus), surf clams (Spisula solida), and king scallops (Pecten maximus) presented as adductor only or adductor plus roe. The method was assessed for sensitivity in terms of LOD and LOQ, toxin recovery, and method precision in each species. It incorporated the PSP toxins deemed toxic and/or prevalent in UK samples and commercially available as certified reference standards. The toxins studied included GTX1-5, dcSTX, STX, C1&2, and NEO. The toxins dcGTX2&3 were included for surf clams due to the prevalence of these toxins in this species as a result of toxin decarbamoylation. Method performance targets were met for each of the characteristics investigated. Consequently, the method was deemed fit for purpose for the screening and quantification of these clam and scallop species for PSP toxins by AOAC Method 2005.06 LC-FLD.

  17. White Sea - Russia

    NASA Technical Reports Server (NTRS)

    2002-01-01

    At bottom center of this true-color Moderate Resolution Imaging Spectroradiometer (MODIS) image from April 13, 2001, the White Sea in western Russia is becoming free of ice in its southern extent. Meanwhile, the blue-green waters along the coast of the peninsula jutting out into the Barents Sea to the northeast could be due to a phytoplankton bloom.

  18. Sea Anemone: Investigations.

    ERIC Educational Resources Information Center

    Hunt, John D.

    1982-01-01

    Several investigations can be undertaken with live sea anemones. A sea anemone's feeding response, fighting power, color, and symbiotic relationships to other invertebrates (such as a marine hermit crab) can be investigated in the high school classroom. Background information and laboratory procedures are provided. (Author/JN)

  19. Red sea drillings.

    PubMed

    Ross, D A; Whitmarsh, R B; Ali, S A; Boudreaux, J E; Coleman, R; Fleisher, R L; Girdler, R; Manheim, F; Matter, A; Nigrini, C; Stoffers, P; Supko, P R

    1973-01-26

    Recent drilling in the Red Sea has shown that much of the basin is underlain by evaporites of a similar age to that of evaporites found in the Mediterranean Sea. These evaporites and their structural positions indicate that other brine areas are present-and, indeed, several others have been discovered.

  20. Getting Your Sea Legs

    PubMed Central

    Stoffregen, Thomas A.; Chen, Fu-Chen; Varlet, Manuel; Alcantara, Cristina; Bardy, Benoît G.

    2013-01-01

    Sea travel mandates changes in the control of the body. The process by which we adapt bodily control to life at sea is known as getting one's sea legs. We conducted the first experimental study of bodily control as maritime novices adapted to motion of a ship at sea. We evaluated postural activity (stance width, stance angle, and the kinematics of body sway) before and during a sea voyage. In addition, we evaluated the role of the visible horizon in the control of body sway. Finally, we related data on postural activity to two subjective experiences that are associated with sea travel; seasickness, and mal de debarquement. Our results revealed rapid changes in postural activity among novices at sea. Before the beginning of the voyage, the temporal dynamics of body sway differed among participants as a function of their (subsequent) severity of seasickness. Body sway measured at sea differed among participants as a function of their (subsequent) experience of mal de debarquement. We discuss implications of these results for general theories of the perception and control of bodily orientation, for the etiology of motion sickness, and for general phenomena of perceptual-motor adaptation and learning. PMID:23840560

  1. Adult Psychology.

    ERIC Educational Resources Information Center

    Bischof, Ledford J.

    This volume comprehensively reviews the research on the psychology of the middle aged (ages 40-65). Topics include the concept of maturity and maturation models, the measurement and influences of adult self image; marriage and sexual patterns; intergenerational relationships between and children; vocations and avocations (work, retirement, play,…

  2. Analysis of the November 1999 Dead Sea Calibration Shots

    SciTech Connect

    Rodgers, A J; Myers, S; Mayeda, K; Walter, W

    2000-07-21

    In November 1999 three chemical explosions were conducted in the Dead Sea for the purposes of calibrating the International Monitoring System (IMS) for the Comprehensive Nuclear-Test-Ban Treaty (CTBT). These shots were organized and conducted by the Geophysical Institute of Israel (GII). Large chemical explosions are the most valuable form of ground truth as the location, depth and origin time are very well known. We focus on the two largest shots (M{sub w} {ge} 3.6) and performed several types of analysis of the regional recordings and travel times of these shots. These data provide valuable new information about the region and offer an opportunity to test monitoring strategies. A crustal and uppermost mantle velocity model was inferred from the travel times of the regional phases: Pn, Pg and Sg. This effort utilized a grid search method to find suitable models of the structure. Results indicate that the crust is relatively thin (32 km) with lower than average crustal velocities (mean V{sub P} = 6.1-6.2 km/s). We located each shot treating the other shot as a calibration explosion. Locations were computed using both station static corrections and kriged correction surfaces. Results show that the locations with static corrections can be better or worse than the locations without corrections. However, the locations with kriged correction surfaces are consistently better than those without corrections or with static corrections because kriging properly accounts for residual statistics. Measures of the S-wave coda for regional events provide a stable estimate of event size (moment magnitude, M{sub w}) and the event source spectrum. S-wave coda envelope amplitudes were calibrated to moments estimated from long-period waveform modeling. We measured moment and body-wave magnitudes and source spectra for many events in the region. The Dead Sea shots show spectral peaking associated with shallow events. Finally, analysis of regional broadband recordings from the Saudi

  3. Black Sea in Bloom

    NASA Technical Reports Server (NTRS)

    2002-01-01

    This true-color image shows bright, turquoise-colored swirls across the surface of the Black Sea, signifying the presence of a large phytoplankton bloom. Scientists have observed similar blooms recurring annually, roughly this same time of year. The Sea of Azov, which is the smaller body of water located just north of the Black Sea in this image, also shows a high level of biological activity currently ongoing. The brownish pixels in the Azov are probably sediments carried in from high waters upstream. This scene was acquired by the Sea-viewing Wide Field-of-view Sensor (SeaWiFS), flying aboard the OrbView-2 satellite, on May 4, 2002. According to the Black Sea Environment Programme's Marine Hydrophysical Institute, the Black Sea is 'one of the marine areas of the world most damaged by human activities.' The coastal zone around these Eastern European inland water bodies is densely populated-supporting a permanent population of roughly 16 million people and another 4 million tourists each year. Six countries border with the Black Sea, including Ukraine to the north, Russia and Georgia to the east, Turkey to the south, and Bulgaria and Romania to the west. Because it is isolated from the world's oceans, and because there is an extensive drainage network of rivers that empty into it, the Black Sea has a unique and delicate water balance which is very important for supporting its marine ecosystem. Of particular concern to scientists is the salinity, water level, and nutrient levels of the Black Sea's waters, all of which are, unfortunately, being impacted by human activities. Within the last three decades the combination of increased nutrient loads from human sources together with pollution and over-harvesting of fisheries has resulted in a sharp decline in water quality. Scientists from each of the Black Sea's bordering nations are currently working together to study the issues and formulate a joint, international strategy for saving this unique marine ecosystem

  4. Sea Otter Enhydra lutris

    USGS Publications Warehouse

    Bodkin, James L.; Ballachey, Brenda E.

    1997-01-01

    The sea otter, Enhydra lutris, is the largest member of the Mustelidae family and is the only one which lives entirely in marine waters. Sea otters are unique among marine mammals because, unlike whales, dolphins and seals, they do not have a layer of fat or blubber to keep them warm in the cool oceans of the North Pacific. Instead, sea otters depend on dense fur that traps tiny air bubbles to insulate them from the cold water. To stay warm, they also must maintain a very high metabolic rate, requiring the sea otter to eat about 25% of its body weight per day. Sea otters eat mostly invertebrates - clams, crabs, urchins, and mussels - found in shallow coastal waters.

  5. 50 CFR 648.1 - Purpose and scope.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... Salmon FMP); the Atlantic sea scallop fishery (Scallop FMP); the Atlantic surf clam and ocean quahog fisheries (Atlantic Surf Clam and Ocean Quahog FMP); the NE multispecies and monkfish fisheries...

  6. Survival and breeding of polar bears in the southern Beaufort Sea in relation to sea ice.

    PubMed

    Regehr, Eric V; Hunter, Christine M; Caswell, Hal; Amstrup, Steven C; Stirling, Ian

    2010-01-01

    1. Observed and predicted declines in Arctic sea ice have raised concerns about marine mammals. In May 2008, the US Fish and Wildlife Service listed polar bears (Ursus maritimus) - one of the most ice-dependent marine mammals - as threatened under the US Endangered Species Act. 2. We evaluated the effects of sea ice conditions on vital rates (survival and breeding probabilities) for polar bears in the southern Beaufort Sea. Although sea ice declines in this and other regions of the polar basin have been among the greatest in the Arctic, to date population-level effects of sea ice loss on polar bears have only been identified in western Hudson Bay, near the southern limit of the species' range. 3. We estimated vital rates using multistate capture-recapture models that classified individuals by sex, age and reproductive category. We used multimodel inference to evaluate a range of statistical models, all of which were structurally based on the polar bear life cycle. We estimated parameters by model averaging, and developed a parametric bootstrap procedure to quantify parameter uncertainty. 4. In the most supported models, polar bear survival declined with an increasing number of days per year that waters over the continental shelf were ice free. In 2001-2003, the ice-free period was relatively short (mean 101 days) and adult female survival was high (0.96-0.99, depending on reproductive state). In 2004 and 2005, the ice-free period was longer (mean 135 days) and adult female survival was low (0.73-0.79, depending on reproductive state). Breeding rates and cub litter survival also declined with increasing duration of the ice-free period. Confidence intervals on vital rate estimates were wide. 5. The effects of sea ice loss on polar bears in the southern Beaufort Sea may apply to polar bear populations in other portions of the polar basin that have similar sea ice dynamics and have experienced similar, or more severe, sea ice declines. Our findings therefore are

  7. Survival and breeding of polar bears in the southern Beaufort Sea in relation to sea ice

    USGS Publications Warehouse

    Regehr, E.V.; Hunter, C.M.; Caswell, H.; Amstrup, Steven C.; Stirling, I.

    2010-01-01

    1. Observed and predicted declines in Arctic sea ice have raised concerns about marine mammals. In May 2008, the US Fish and Wildlife Service listed polar bears (Ursus maritimus) - one of the most ice-dependent marine mammals - as threatened under the US Endangered Species Act. 2. We evaluated the effects of sea ice conditions on vital rates (survival and breeding probabilities) for polar bears in the southern Beaufort Sea. Although sea ice declines in this and other regions of the polar basin have been among the greatest in the Arctic, to date population-level effects of sea ice loss on polar bears have only been identified in western Hudson Bay, near the southern limit of the species' range. 3. We estimated vital rates using multistate capture-recapture models that classified individuals by sex, age and reproductive category. We used multimodel inference to evaluate a range of statistical models, all of which were structurally based on the polar bear life cycle. We estimated parameters by model averaging, and developed a parametric bootstrap procedure to quantify parameter uncertainty. 4. In the most supported models, polar bear survival declined with an increasing number of days per year that waters over the continental shelf were ice free. In 2001-2003, the ice-free period was relatively short (mean 101 days) and adult female survival was high (0 ∙ 96-0 ∙ 99, depending on reproductive state). In 2004 and 2005, the ice-free period was longer (mean 135 days) and adult female survival was low (0 ∙ 73-0 ∙ 79, depending on reproductive state). Breeding rates and cub litter survival also declined with increasing duration of the ice-free period. Confidence intervals on vital rate estimates were wide. 5. The effects of sea ice loss on polar bears in the southern Beaufort Sea may apply to polar bear populations in other portions of the polar basin that have similar sea ice dynamics and have experienced similar, or more severe, sea ice declines. Our findings

  8. Marine Mammals, Coastal and River Issues. Alaska Sea Week Curriculum Series VII. Alaska Sea Grant Report 84-8.

    ERIC Educational Resources Information Center

    Mickelson, Belle

    This curriculum guide is the last (Series VII) in a six-volume set that comprises the Sea Week Curriculum Series developed in Alaska. The guide lends itself to the sixth-grade curriculum but can be adapted to preschool, secondary, and adult education. Eight units contain 43 activities with worksheets that cover the following topics: (1) the values…

  9. ADULT EDUCATION OF MIGRANT ADULTS.

    ERIC Educational Resources Information Center

    BEAL, CATHERINE; AND OTHERS

    UNITS ON MIGRANT ADULT EDUCATION, AND A UNIT ON ORGANIZING INFORMAL GROUPS OF MIGRANT WOMEN TO DISCUSS MAINTAINING AND IMPROVING THEIR TEMPORARY HOMES, ARE PRESENTED. THE GOALS OF THE UNIT ON EDUCATION FOR MIGRANT MEN ARE ECONOMIC INDEPENDENCE, BETTER HEALTH AND WELL-BEING, AND BETTER HANDLING OF RESPONSIBILITIES. THE MAIN DIVISIONS OF THE…

  10. Tracking sea turtles in the Everglades

    USGS Publications Warehouse

    Hart, Kristin M.

    2008-01-01

    The U.S. Geological Survey (USGS) has a long history of conducting research on threatened, endangered, and at-risk species inhabiting both terrestrial and marine environments, particularly those found within national parks and protected areas. In the coastal Gulf of Mexico region, for example, USGS scientist Donna Shaver at Padre Island National Seashore in Texas has focused on “headstarting” hatchlings of the rare Kemp’s ridley sea turtle (Lepidochelys kempii). She is also analyzing trends in sea turtle strandings onshore and interactions with Gulf shrimp fisheries. Along south Florida’s Gulf coast, the USGS has focused on research and monitoring for managing the greater Everglades ecosystem. One novel project involves the endangered green sea turtle (Chelonia mydas). The ecology and movements of adult green turtles are reasonably well understood, largely due to decades of nesting beach monitoring by a network of researchers and volunteers. In contrast, relatively little is known about the habitat requirements and movements of juvenile and subadult sea turtles of any species in their aquatic environment.

  11. Global sea level rise

    SciTech Connect

    Douglas, B.C. )

    1991-04-15

    Published values for the long-term, global mean sea level rise determined from tide gauge records exhibit considerable scatter, from about 1 mm to 3 mm/yr. This disparity is not attributable to instrument error; long-term trends computed at adjacent sites often agree to within a few tenths of a millimeter per year. Instead, the differing estimates of global sea level rise appear to be in large part due to authors' using data from gauges located at convergent tectonic plate boundaries, where changes of land elevation give fictitious sea level trends. In addition, virtually all gauges undergo subsidence or uplift due to postglacial rebound (PGR) from the last deglaciation at a rate comparable to or greater than the secular rise of sea level. Modeling PGR by the ICE-3G model of Tushingham and Peltier (1991) and avoiding tide gauge records in areas of converging tectonic plates produces a highly consistent set of long sea level records. The value for mean sea level rise obtained from a global set of 21 such stations in nine oceanic regions with an average record length of 76 years during the period 1880-1980 is 1.8 mm/yr {plus minus} 0.1. This result provides confidence that carefully selected long tide gauge records measure the same underlying trend of sea level and that many old tide gauge records are of very high quality.

  12. Measurement of serum immunoglobulin concentration in killer whales and sea otters by radial immunodiffusion.

    PubMed

    Taylor, Bernadette C; Brotheridge, Rory M; Jessup, David A; Stott, Jeffrey L

    2002-10-28

    Killer whales and sea otters maintained in captivity are the subjects of routine health monitoring programs, and interest in immunologic studies in sea otters has been rising recently in response to potential impacts from infectious disease and environmental pollution on the threatened southern sea otter population. Development of species-specific reagents for immunologic studies in these two marine mammals is currently in its infancy. In this study, killer whale and sea otter immunoglobulin-specific polyclonal antibodies were generated, and used to develop tests for serum Ig concentration in the killer whale (Orcinus orca) and the southern (Enhydra lutris nereis) and northern sea otter (Enhydra lutris lutris). Killer whale serum IgG was purified using caprylic acid/ammonium sulfate precipitation. Sea otter plasma IgG was purified using protein-A-agarose. Polyclonal anti-Ig antisera were produced in rabbits, and specificity confirmed by immunoelectrophoresis. Radial immunodiffusion was used to measure Ig concentration in serum or plasma samples derived from 21 captive killer whales, 18 wild and 4 captive southern sea otters and 15 wild and 4 captive northern sea otters grouped by age. Mean killer whale serum Ig concentration (+/-95% confidence interval) ranged from 15.04 +/- 3.97 g/l for animals aged 0-5 years to 26.65 +/- 9.8 g/l for animals aged >10 years. Mean sea otter serum Ig concentration (+/-95% confidence interval) ranged from 28.39 +/- 11.00 g/l for southern sub-adults to 32.76 +/- 11.58 g/l for southern adults. No significant difference in serum Ig concentration was found between southern and northern sea otters. Serum Ig concentrations in two northern sea otter pups were low compared to those of adult sea otters. The two serum Ig quantitation assays produced were highly specific and reproducible and will be useful additions to the limited number of tests available for immune function in these marine mammal species.

  13. 34 CFR 491.30 - How may an SEA operate the program?

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 34 Education 3 2011-07-01 2011-07-01 false How may an SEA operate the program? 491.30 Section 491.30 Education Regulations of the Offices of the Department of Education (Continued) OFFICE OF VOCATIONAL AND ADULT EDUCATION, DEPARTMENT OF EDUCATION ADULT EDUCATION FOR THE HOMELESS PROGRAM...

  14. Panic Disorder among Adults

    MedlinePlus

    ... Autism Spectrum Disorder (ASD) Eating Disorders Among Adults - Anorexia Nervosa Eating Disorders Among Adults - Binge Eating Disorder ... Autism Spectrum Disorder (ASD) Eating Disorders Among Adults - Anorexia Nervosa Eating Disorders Among Adults - Binge Eating Disorder ...

  15. Obstructive sleep apnea - adults

    MedlinePlus

    Sleep apnea - obstructive - adults; Apnea - obstructive sleep apnea syndrome - adults; Sleep-disordered breathing - adults; OSA - adults ... When you sleep, all of the muscles in your body become more relaxed. This includes the muscles that help keep your ...

  16. Polar bear population dynamics in the southern Beaufort Sea during a period of sea ice decline

    USGS Publications Warehouse

    Bromaghin, Jeffrey F.; McDonald, Trent L.; Stirling, Ian; Derocher, Andrew E.; Richardson, Evan S.; Regehr, Eric V.; Douglas, David C.; Durner, George M.; Atwood, Todd C.; Amstrup, Steven C.

    2015-01-01

    In the southern Beaufort Sea of the United States and Canada, prior investigations have linked declines in summer sea ice to reduced physical condition, growth, and survival of polar bears (Ursus maritimus). Combined with projections of population decline due to continued climate warming and the ensuing loss of sea ice habitat, those findings contributed to the 2008 decision to list the species as threatened under the U.S. Endangered Species Act. Here, we used mark–recapture models to investigate the population dynamics of polar bears in the southern Beaufort Sea from 2001 to 2010, years during which the spatial and temporal extent of summer sea ice generally declined. Low survival from 2004 through 2006 led to a 25–50% decline in abundance. We hypothesize that low survival during this period resulted from (1) unfavorable ice conditions that limited access to prey during multiple seasons; and possibly, (2) low prey abundance. For reasons that are not clear, survival of adults and cubs began to improve in 2007 and abundance was comparatively stable from 2008 to 2010, with ~900 bears in 2010 (90% CI 606–1212). However, survival of subadult bears declined throughout the entire period. Reduced spatial and temporal availability of sea ice is expected to increasingly force population dynamics of polar bears as the climate continues to warm. However, in the short term, our findings suggest that factors other than sea ice can influence survival. A refined understanding of the ecological mechanisms underlying polar bear population dynamics is necessary to improve projections of their future status and facilitate development of management strategies.

  17. Polar bear population dynamics in the southern Beaufort Sea during a period of sea ice decline.

    PubMed

    Bromaghin, Jeffrey F; Mcdonald, Trent L; Stirling, Ian; Derocher, Andrew E; Richardson, Evan S; Regehr, Eric V; Douglas, David C; Durner, George M; Atwood, Todd; Amstrup, Steven C

    2015-04-01

    In the southern Beaufort Sea of the United States and Canada, prior investigations have linked declines in summer sea ice to reduced physical condition, growth, and survival of polar bears (Ursus maritimus). Combined with projections of population decline due to continued climate warming and the ensuing loss of sea ice habitat, those findings contributed to the 2008 decision to list the species as threatened under the U.S. Endangered Species Act. Here, we used mark-recapture models to investigate the population dynamics of polar bears in the southern Beaufort Sea from 2001 to 2010, years during which the spatial and temporal extent of summer sea ice generally declined. Low survival from 2004 through 2006 led to a 25-50% decline in abundance. We hypothesize that low survival during this period resulted from (1) unfavorable ice conditions that limited access to prey during multiple seasons; and possibly, (2) low prey abundance. For reasons that are not clear, survival of adults and cubs began to improve in 2007 and abundance was comparatively stable from 2008 to 2010, with ~900 bears in 2010 (90% CI 606-1212). However, survival of subadult bears declined throughout the entire period. Reduced spatial and temporal availability of sea ice is expected to increasingly force population dynamics of polar bears as the climate continues to warm. However, in the short term, our findings suggest that factors other than sea ice can influence survival. A refined understanding of the ecological mechanisms underlying polar bear population dynamics is necessary to improve projections of their future status and facilitate development of management strategies.

  18. Dead sea water intoxication.

    PubMed

    Levy-Khademi, Floris; Brooks, Rebecca; Maayan, Channa; Tenenbaum, Ariel; Wexler, Isaiah D

    2012-08-01

    Near drowning in the Dead Sea is associated with both respiratory manifestations and severe electrolyte abnormalities. It is often difficult to distinguish between the contributions of sea water aspiration or ingestion to clinical manifestations. We present a unique case of accidental ingestion of a large amount of Dead Sea water through a gastrostomy tube in which a patient with familial dysautonomia presented with severe electrolyte disturbances. Forced diuresis with large amounts of intravenous fluids resulted in clinical and biochemical improvement. Full recovery was achieved after 2 days of treatment.

  19. Sea level variation

    NASA Technical Reports Server (NTRS)

    Douglas, Bruce C.

    1992-01-01

    Published values for the long-term, global mean sea level rise determined from tide gauge records range from about one to three mm per year. The scatter of the estimates appears to arise largely from the use of data from gauges located at convergent tectonic plate boundaries where changes of land elevation give fictitious sea level trends, and the effects of large interdecadal and longer sea level variations on short (less than 50+ years) or sappy records. In addition, virtually all gauges undergo subsidence or uplift due to isostatic rebound from the last deglaciation at a rate comparable to or greater than the secular rise of sea level. Modeling rebound by the ICE-3G model of Tushingham and Peltier (1990) and avoiding tide gauge records in areas of converging tectonic plates produces a highly consistent set of long sea level records. A global set of 21 such stations in nine oceanic regions with an average record length of 76 years during the period 1880-1980 yields the global sea level rise value 1.8 mm/year +/- 0.1. Greenhouse warming scenarios commonly forecast an additional acceleration of global sea level in the next 5 or 6+ decades in the range 0.1-0.2 mm/yr2. Because of the large power at low frequencies in the sea level spectrum, very long tide gauge records (75 years minimum) have been examined for past apparent sea level acceleration. For the 80-year period 1905-1985, 23 essentially complete tide gauge records in 10 geographic groups are available for analysis. These yielded the apparent global acceleration -0.011 (+/- 0.012) mm/yr2. A larger, less uniform set of 37 records in the same 10 groups with 92 years average length covering the 141 years from 1850-1991 gave 0.001 (+/- 0.008) mm/yr2. Thus there is no evidence for an apparent acceleration in the past 100+ years that is significant either statistically, or in comparison to values associated with global warming. Unfortunately, the large interdecadal fluctuations of sea level severely affect

  20. Evidence that sea lampreys (Petromyzon marinus) complete their life cycle within a tributary of the Laurentian Great Lakes by parasitizing fishes in inland lakes

    USGS Publications Warehouse

    Johnson, Nicholas; Twohey, Michael B.; Miehls, Scott M.; Cwalinski, Tim A; Godby, Neal A; Lochet, Aude; Slade, Jeffrey W.; Jubar, Aaron K.; Siefkes, Michael J.

    2016-01-01

    The sea lamprey (Petromyzon marinus) invaded the upper Laurentian Great Lakes and feeds on valued fish. The Cheboygan River, Michigan, USA, is a large sea lamprey producing tributary to Lake Huron and despite having a renovated dam 2 km from the river mouth that presumably blocks sea lamprey spawning migrations, the watershed upstream of the dam remains infested with larval sea lamprey. A navigational lock near the dam has been hypothesized as the means of escapement of adult sea lampreys from Lake Huron and source of the upper river population (H1). However, an alternative hypothesis (H2) is that some sea lampreys complete their life cycle upstream of the dam, without entering Lake Huron. To evaluate the alternative hypothesis, we gathered angler reports of lamprey wounds on game fishes upstream of the dam, and captured adult sea lampreys downstream and upstream of the dam to contrast abundance, run timing, size, and statolith microchemistry. Results indicate that a small population of adult sea lampreys (n < 200) completed their life cycle upstream of the dam during 2013 and 2014. This is the most comprehensive evidence that sea lampreys complete their life history within a tributary of the upper Great Lakes, and indicates that similar landlocked populations could occur in other watersheds. Because the adult sea lamprey population upstream of the dam is small, complete elimination of the already low adult escapement from Lake Huron might allow multiple control tactics such as lampricides, trapping, and sterile male release to eradicate the population.

  1. PCB concentrations and activity of sea lamprey Petromyzon marinus vary by sex

    USGS Publications Warehouse

    Madenjian, Charles P.; Johnson, Nicholas S.; Binder, Thomas R.; Rediske, Richard R.; O'Keefe, James P.

    2013-01-01

    We determined the polychlorinated biphenyl (PCB) concentrations of 40 male and 40 female adult sea lampreys Petromyzon marinus captured in the Cheboygan River, a tributary to Lake Huron, during May 2011. In addition, we performed a laboratory experiment using passive integrated transponder tags to determine whether male adult sea lampreys were more active than female adult sea lampreys. Sex had a significant effect on PCB concentration, and PCB concentration at a given level of sea lamprey condition was approximately 25 % greater in males than in females. Adjusting for the difference in condition between the sexes, males averaged a 17 % greater PCB concentration compared with females. Results from the laboratory experiment indicated that males were significantly more active than females. The observed sex difference in PCB concentrations was not due to female sea lampreys releasing eggs at spawning because the sea lamprey is semelparous, and we caught the sea lampreys before spawning. Rather, we attributed the sex difference in PCB concentrations to a greater rate of energy expenditure in males compared with females. We proposed that this greater rate of energy expenditure was likely due to greater activity. Our laboratory experiment results supported this hypothesis. A greater resting metabolic rate may also have contributed to a greater rate of energy expenditure. Our findings should eventually be applicable toward improving control of sea lamprey, a pest responsible for considerable damage to fisheries in lakes where it is not native.

  2. The north Sulu Sea productivity

    NASA Astrophysics Data System (ADS)

    Xiao, Z.

    2009-12-01

    The Sulu Sea is a part of the western North Pacific. It is a closed sea for its deep water and a semi-closed sea for its upper layer. The Sulu Sea exchanges mainly surface waters with the South China Sea and the Celebes Sea. The Sulu Sea is more productive than the adjacent South China Sea (Jones, 2002). On the basis of MERIS satellite observations from 2002 to 2008, we focus on the high-chlorophyll area as an indicator of the abundance of primary productivity in the Sulu Sea. Strong chlorophyll concentration in the north Sulu Sea close to the Mindoro Strait mainly occurs from December to March and low chlorophyll concentration happens in April to November. The adjacent South China Sea on the other side of Mindoro Strait has shown persistent signs of low chlorophyll concentration. Based on 1/8° Global Navy Coastal Ocean Model, the intrusion of the South China Sea waters through the Mindoro Strait to the Sulu Sea from April to November is the main reason for the low chlorophyll concentration observed in the north Sulu Sea. During April to November, the South China Sea waters flow through the Mindoro Strait and stay on the surface of the north Sulu Sea because of their low density. The north Sulu Sea waters mix with fresher waters coming from the South China Sea without new nutrients supply. When the inflow from South China Sea to Sulu Sea ceases in December to March, the upwelling due to the summer monsoon wind becomes an important mechanism supplying deep nutrients to the surface water which lead to high chlorophyll concentration. Jones, I.S.F., 2002. Primary production in the Sulu Sea. Proceedings of the Indian Academy of Sciences-Earth and Planetary Sciences 111, 209-213.

  3. Polycyclic aromatic hydrocarbons (PAHs) in livers of California sea otters.

    PubMed

    Kannan, Kurunthachalam; Perrotta, Emily

    2008-03-01

    Concentrations of 16 polycyclic aromatic hydrocarbons (PAHs) were measured in livers of 81 adult female sea otters collected along the California coast in 1992-2002. Concentrations of summation operatorPAHs in livers of sea otters were in the range of 588-17400ng/g lipid wt (mean: 3880ng/g, lipid wt). On a wet weight basis, the concentrations ranged from 17 to 1430ng/g (mean: 146ng/g). Overall, di- and tri-cyclic aromatic hydrocarbons, namely, naphthalene, fluorene, phenanthrene/anthracene, and acenaphthylene, were the predominant compounds found in the livers. Although petroleum-related sources appear to be the major contributors to PAH exposure in sea otters, exposure sources varied by geographical sub-regions. Dibenz[a,h]anthracene was found to comprise a significant proportion of the summation operatorPAH concentrations in sea otters from the northern sub-region of the study area. No significant difference existed in the concentrations of summation operatorPAHs among sea otters that died from infectious diseases, emaciation, and noninfectious causes. Concentrations of summation operatorPAHs in livers of sea otters decreased significantly from 1992 to 2002. Because of the rapid metabolism of PAHs in marine mammals such as sea otters, further studies examining the association of PAHs with health effects should determine hydroxylated metabolites in livers.

  4. 2011 Sea Ice Minimum

    NASA Video Gallery

    This video shows Arctic sea ice from March 7, 2011, to Sept. 9, 2011, ending with a comparison of the 30-year average minimum extent, shown in yellow, and the Northwest Passage, in red. (no audio) ...

  5. Sea ice ecosystems.

    PubMed

    Arrigo, Kevin R

    2014-01-01

    Polar sea ice is one of the largest ecosystems on Earth. The liquid brine fraction of the ice matrix is home to a diverse array of organisms, ranging from tiny archaea to larger fish and invertebrates. These organisms can tolerate high brine salinity and low temperature but do best when conditions are milder. Thriving ice algal communities, generally dominated by diatoms, live at the ice/water interface and in recently flooded surface and interior layers, especially during spring, when temperatures begin to rise. Although protists dominate the sea ice biomass, heterotrophic bacteria are also abundant. The sea ice ecosystem provides food for a host of animals, with crustaceans being the most conspicuous. Uneaten organic matter from the ice sinks through the water column and feeds benthic ecosystems. As sea ice extent declines, ice algae likely contribute a shrinking fraction of the total amount of organic matter produced in polar waters.

  6. Record Sea Ice Minimum

    NASA Technical Reports Server (NTRS)

    2007-01-01

    Arctic sea ice reached a record low in September 2007, below the previous record set in 2005 and substantially below the long-term average. This image shows the Arctic as observed by the Advanced Microwave Scanning Radiometer for EOS (AMSR-E) aboard NASA's Aqua satellite on September 16, 2007. In this image, blue indicates open water, white indicates high sea ice concentration, and turquoise indicates loosely packed sea ice. The black circle at the North Pole results from an absence of data as the satellite does not make observations that far north. Three contour lines appear on this image. The red line is the 2007 minimum, as of September 15, about the same time the record low was reached, and it almost exactly fits the sea ice observed by AMSR-E. The green line indicates the 2005 minimum, the previous record low. The yellow line indicates the median minimum from 1979 to 2000.

  7. Sea level change

    SciTech Connect

    Meier, M.F.

    1996-12-31

    The IPCC (Intergovernmental Panel on Climate Change) 1995 Scientific Assessment, Chapter 7. Sea Level Change, presents a modest revision of the similar chapter in the 1990 Assessment. Principal conclusions on observed sea-level change and the principal terms in the sea-level equation (ocean thermal expansion, glaciers, ice sheets, and land hydrology), including our knowledge of the present-day (defined as the 20th Century) components of sea-level rise, and projections of these for the future, are presented here. Some of the interesting glaciological problems which are involved in these studies are discussed in more detail. The emphasis here is on trends over decades to a century, not on shorter variations nor on those of the geologic past. Unfortunately, some of the IPCC projections had not been agreed at the time of writing of this paper, and these projections will not be given here. 15 refs., 2 figs.

  8. Dead Sea Scrolls

    NASA Technical Reports Server (NTRS)

    1994-01-01

    A consortium of researchers from Jet Propulsion Laboratory and three other organizations used charged coupled devices (CCDs) and other imaging enhancement technology to decipher previously unreadable portions of the Dead Sea Scrolls. The technique has potentially important implications for archeology.

  9. Alaska: Beaufort Sea

    Atmospheric Science Data Center

    2014-05-15

    ... to improving our knowledge and understanding of polar weather and long term climate fluctuations. These views from two satellite ... the same geographic area. To identify sea ice types, the National Oceanic and Atmospheric Administration (NOAA) National Ice Center ...

  10. Sea Ice Minimum 2016

    NASA Video Gallery

    This animation shows the evolution of the Arctic sea ice cover from its wintertime maximum extent, which was reached on Mar. 24, 2016, and was the lowest on record for the second year in a row, to ...

  11. A Sea Experience.

    ERIC Educational Resources Information Center

    Glickstein, Neil

    1989-01-01

    Described is a teacher education program organized by the Sea Education Association in Woods Hole (Massachusetts). The experience, including activities and examples of studies conducted, is discussed. Contact information for future cruises is included. (CW)

  12. Sea Ice Ecosystems

    NASA Astrophysics Data System (ADS)

    Arrigo, Kevin R.

    2014-01-01

    Polar sea ice is one of the largest ecosystems on Earth. The liquid brine fraction of the ice matrix is home to a diverse array of organisms, ranging from tiny archaea to larger fish and invertebrates. These organisms can tolerate high brine salinity and low temperature but do best when conditions are milder. Thriving ice algal communities, generally dominated by diatoms, live at the ice/water interface and in recently flooded surface and interior layers, especially during spring, when temperatures begin to rise. Although protists dominate the sea ice biomass, heterotrophic bacteria are also abundant. The sea ice ecosystem provides food for a host of animals, with crustaceans being the most conspicuous. Uneaten organic matter from the ice sinks through the water column and feeds benthic ecosystems. As sea ice extent declines, ice algae likely contribute a shrinking fraction of the total amount of organic matter produced in polar waters.

  13. Sensing the sea bed

    NASA Astrophysics Data System (ADS)

    2009-07-01

    William Wilcock and a team of scientists and engineers drilled holes in the sea floor, and inadvertently provided a breeding ground for octopuses, in their attempt to understand deep-ocean hydrothermal venting.

  14. Sea Raiders of Acadia

    ERIC Educational Resources Information Center

    Dickason, Olive Patricia

    1976-01-01

    One of the French allies, the Micmac, waged much of the war against the English on the sea. This article discusses the determined stand by the Micmac seamen of the eastern coasts for their lands and way of life. (NQ)

  15. A Sea Floor Penetrometer.

    DTIC Science & Technology

    processed through an analog-to-digital (A/D) converter, and stored in the memory of a mini-computer. Computer algorithms are applied to the deceleration data to provide real-time sea floor classification.

  16. Teacher at Sea.

    ERIC Educational Resources Information Center

    Beighley, Karl

    1998-01-01

    Outlines the experiences of a teacher in the National Oceanic and Atmospheric Administration's (NOAA) Teacher At Sea Program in which teachers are placed on NOAA vessels to work with professional scientists doing critical, real world research. (DDR)

  17. South China Sea

    USGS Publications Warehouse

    Morton, Brian; Blackmore, Graham

    2001-01-01

    The South China Sea is poorly understood in terms of its marine biota, ecology and the human impacts upon it. What is known is most often contained in reports and workshop and conference documents that are not available to the wider scientific community. The South China Sea has an area of some 3.3 million km2 and depths range from the shallowest coastal fringe to 5377 m in the Manila Trench. It is also studded with numerous islets, atolls and reefs many of which are just awash at low tide. It is largely confined within the Tropic of Cancer and, therefore, experiences a monsoonal climate being influenced by the Southwest Monsoon in summer and the Northeast Monsoon in winter. The South China Sea is a marginal sea and, therefore, largely surrounded by land. Countries that have a major influence on and claims to the sea include China, Malaysia, the Philippines and Vietnam, although Thailand, Indonesia and Taiwan have some too. The coastal fringes of the South China Sea are home to about 270 million people that have had some of the fastest developing and most vibrant economies on the globe. Consequently, anthropogenic impacts, such as over-exploitation of resources and pollution, are anticipated to be huge although, in reality, relatively little is known about them. The Indo-West Pacific biogeographic province, at the centre of which the South China Sea lies, is probably the world's most diverse shallow-water marine area. Of the three major nearshore habitat types, i.e., coral reefs, mangroves and seagrasses, 45 mangrove species out of a global of 51, most of the currently recognised 70 coral genera and 20 of 50 known seagrass species have been recorded from the South China Sea. The island groups of the South China Sea are all disputed and sovereignty is claimed over them by a number of countries. Conflicts have in recent decades arisen over them because of perceived national rights. It is perhaps because of this that so little research has been undertaken on the South

  18. South China Sea.

    PubMed

    Morton, B; Blackmore, G

    2001-12-01

    The South China Sea is poorly understood in terms of its marine biota, ecology and the human impacts upon it. What is known is most often contained in reports and workshop and conference documents that are not available to the wider scientific community. The South China Sea has an area of some 3.3 million km2 and depths range from the shallowest coastal fringe to 5377 m in the Manila Trench. It is also studded with numerous islets, atolls and reefs many of which are just awash at low tide. It is largely confined within the Tropic of Cancer and, therefore, experiences a monsoonal climate being influenced by the Southwest Monsoon in summer and the Northeast Monsoon in winter. The South China Sea is a marginal sea and, therefore, largely surrounded by land. Countries that have a major influence on and claims to the sea include China, Malaysia, the Philippines and Vietnam, although Thailand, Indonesia and Taiwan have some too. The coastal fringes of the South China Sea are home to about 270 million people that have had some of the fastest developing and most vibrant economies on the globe. Consequently, anthropogenic impacts, such as over-exploitation of resources and pollution, are anticipated to be huge although, in reality, relatively little is known about them. The Indo-West Pacific biogeographic province, at the centre of which the South China Sea lies, is probably the world's most diverse shallow-water marine area. Of three major nearshore habitat types, i.e., coral reefs, mangroves and seagrasses, 45 mangrove species out of a global total of 51, most of the currently recognised 70 coral genera and 20 of 50 known seagrass species have been recorded from the South China Sea. The island groups of the South China Sea are all disputed and sovereignty is claimed over them by a number of countries. Conflicts have in recent decades arisen over them because of perceived national rights. It is perhaps because of this that so little research has been undertaken on the

  19. Black Sea Becomes Turquoise

    NASA Technical Reports Server (NTRS)

    2002-01-01

    This true-color image shows bright, turquoise-colored swirls across the surface of the Black Sea, signifying the presence of a large phytoplankton bloom. Scientists have observed similar blooms recurring annually, roughly this same time of year. The Sea of Azov, which is the smaller body of water located just north of the Black Sea in this image, also shows a high level of color variance. The brownish pixels in the Azov are probably due to sediments carried in from high waters and snowmelt from upstream. This scene was acquired by the Moderate Resolution Imaging Spectroradiometer, flying aboard NASA's Terra satellite, on May 14, 2002. According to the Black Sea Environment Programme's Marine Hydrophysical Institute, the Black Sea is ?one of the marine areas of the world most damaged by human activities.? The coastal zone around these Eastern European inland water bodies is densely populated'supporting a permanent population of roughly 16 million people and another 4 million tourists each year. Six countries border with the Black Sea, including Ukraine to the north, Russia and Georgia to the east, Turkey to the south, and Bulgaria and Romania to the west. Because it is isolated from the world's oceans, and because there is an extensive drainage network of rivers that empty into it, the Black Sea has a unique and delicate water balance which is very important for supporting its marine ecosystem. Of particular concern to scientists is the salinity, water level, and nutrient levels of the Black Sea's waters, all of which are, unfortunately, being impacted by human activities. Within the last three decades the combination of increased nutrient loads from human sources together with pollution and over-harvesting of fisheries has resulted in a sharp decline in water quality. Scientists from each of the Black Sea's bordering nations are currently working together to study the issues and formulate a joint, international strategy for saving this unique marine ecosystem

  20. Egypt and Red Sea

    NASA Technical Reports Server (NTRS)

    1982-01-01

    A panaramic view of eastern Egypt, The Red Sea and Saudi Arabia beyond (24.0N, 33.0E). In this desert country, where water is life, the high Aswan Dam and the impounded waters of the Nile River in the foreground assure water availability into the next century. The Red Sea beyond, part of the Suez Canal seaway, serves as a commercial link to the world and separates Egypt from Saudi Arabia.

  1. Analysis of sea level and sea surface temperature changes in the Black Sea

    NASA Astrophysics Data System (ADS)

    Betul Avsar, Nevin; Jin, Shuanggen; Kutoglu, Hakan; Erol, Bihter

    2016-07-01

    The Black Sea is a nearly closed sea with limited interaction with the Mediterranean Sea through the Turkish Straits. Measurement of sea level change will provide constraints on the water mass balance and thermal expansion of seawaters in response to climate change. In this paper, sea level changes in the Black Sea are investigated between January 1993 and December 2014 using multi-mission satellite altimetry data and sea surface temperature (SST) data. Here, the daily Maps of Sea Level Anomaly (MSLA) gridded with a 1/8°x1/8° spatial resolution from AVISO and the NOAA 1/4° daily Optimum Interpolation Sea Surface Temperature (OISST) Anomaly data set are used. The annual cycles of sea level and sea surface temperature changes reach the maximum values in November and January, respectively. The trend is 3.16±0.77 mm/yr for sea level change and -0.06±0.01°C/yr for sea surface temperature during the same 22-year period. The observed sea level rise is highly correlated with sea surface warming for the same time periods. In addition, the geographical distribution of the rates of the Black Sea level and SST changes between January 1993 and December 2014 are further analyzed, showing a good agreement in the eastern Black Sea. The rates of sea level rise and sea surface warming are larger in the eastern part than in the western part except in the northwestern Black Sea. Finally, the temporal correlation between sea level and SST time series are presented based on the Empirical Orthogonal Function (EOF) analysis.

  2. Contemporary sea level rise.

    PubMed

    Cazenave, Anny; Llovel, William

    2010-01-01

    Measuring sea level change and understanding its causes has considerably improved in the recent years, essentially because new in situ and remote sensing observations have become available. Here we report on most recent results on contemporary sea level rise. We first present sea level observations from tide gauges over the twentieth century and from satellite altimetry since the early 1990s. We next discuss the most recent progress made in quantifying the processes causing sea level change on timescales ranging from years to decades, i.e., thermal expansion of the oceans, land ice mass loss, and land water-storage change. We show that for the 1993-2007 time span, the sum of climate-related contributions (2.85 +/- 0.35 mm year(-1)) is only slightly less than altimetry-based sea level rise (3.3 +/- 0.4 mm year(-1)): approximately 30% of the observed rate of rise is due to ocean thermal expansion and approximately 55% results from land ice melt. Recent acceleration in glacier melting and ice mass loss from the ice sheets increases the latter contribution up to 80% for the past five years. We also review the main causes of regional variability in sea level trends: The dominant contribution results from nonuniform changes in ocean thermal expansion.

  3. Adult Development and Learning of Older Adults

    ERIC Educational Resources Information Center

    Roberson, Donald N., Jr.

    2005-01-01

    This summary of adult development covers a wide range of authors. Adult development is one way of understanding how the internal and external changes in our lives have an impact on learning. Of particular importance in this work are the developmental issues of older adults. I present various theories of adult development such as linear and…

  4. Annual sea ice. An air-sea gas exchange moderator

    SciTech Connect

    Gosink, T.A.; Kelley, J.J.

    1982-01-01

    Arctic annual sea ice, particularly when it is relatively warm (> -15/sup 0/C) permits significant gas exchange between the sea and air throughout the entire year. Sea ice, particularly annual sea ice, differs from freshwater ice with respect to its permeability to gases. The presence of brine allows for significant air-sea-ice exchange of CO/sub 2/ throughout the winter, which may significantly affect the global carbon dioxide balance. Other trace gases are also noted to be enriched in sea ice, but less is known about their importance to air-sea-interactions at this time. Both physical and biological factors cause and modify evolution of gases from the surface of sea ice. Quantitative and qualitative descriptions of the nature and physical behavior of sea ice with respect to brine and gases are discussed.

  5. Projecting future sea level

    USGS Publications Warehouse

    Cayan, Daniel R.; Bromirski, Peter; Hayhoe, Katharine; Tyree, Mary; Dettinger, Mike; Flick, Reinhard

    2006-01-01

    California’s coastal observations and global model projections indicate that California’s open coast and estuaries will experience increasing sea levels over the next century. Sea level rise has affected much of the coast of California, including the Southern California coast, the Central California open coast, and the San Francisco Bay and upper estuary. These trends, quantified from a small set of California tide gages, have ranged from 10–20 centimeters (cm) (3.9–7.9 inches) per century, quite similar to that estimated for global mean sea level. So far, there is little evidence that the rate of rise has accelerated, and the rate of rise at California tide gages has actually flattened since 1980, but projections suggest substantial sea level rise may occur over the next century. Climate change simulations project a substantial rate of global sea level rise over the next century due to thermal expansion as the oceans warm and runoff from melting land-based snow and ice accelerates. Sea level rise projected from the models increases with the amount of warming. Relative to sea levels in 2000, by the 2070–2099 period, sea level rise projections range from 11–54 cm (4.3–21 in) for simulations following the lower (B1) greenhouse gas (GHG) emissions scenario, from 14–61 cm (5.5–24 in) for the middle-upper (A2) emission scenario, and from 17–72 cm (6.7–28 in) for the highest (A1fi) scenario. In addition to relatively steady secular trends, sea levels along the California coast undergo shorter period variability above or below predicted tide levels and changes associated with long-term trends. These variations are caused by weather events and by seasonal to decadal climate fluctuations over the Pacific Ocean that in turn affect the Pacific coast. Highest coastal sea levels have occurred when winter storms and Pacific climate disturbances, such as El Niño, have coincided with high astronomical tides. This study considers a range of projected future

  6. The White Sea, Russia

    NASA Technical Reports Server (NTRS)

    2002-01-01

    Editor's Note: The caption below, published on May 10, 2001, is incorrect. According to Masha Vorontsova, director of the International Fund for Animal Welfare in Moscow, the situation with the seal pups in the White Sea is normal. There is no disaster and there never was. For more details, refer to the article entitled 'No Danger' on the New Scientist home page. The Earth Observatory regrets the earlier errant report. Original Caption According to the Russian Polar Research Institute for Fisheries and Oceanography, between 250,000 and 300,000 Greenland seal pups face death by starvation over the next two months due to a cruel trick by mother nature. The seals, most of them less than two months old, are trapped on ice sheets that remain locked in the White Sea, located near Archangel in Northern Russia. Typically, during the spring thaw the ice sheets break up and flow with the currents northward into the Barents Sea, the seals' spring feeding grounds. The seal pups hitch a ride on the ice floes, living on their own individual stores of fat until they arrive in the Barents Sea. Their mothers departed for the Barents Sea weeks ago. In a normal year, the seal pups' trip from the White Sea out to the Barents takes about six weeks and the seals have adapted to rely upon this mechanism of mother nature. During their yearly migration, the mother seals usually stay with their pups and feed them until their pelts turn from white to grey--a sign that the pups are mature enough to swim and feed themselves. Unfortunately, this year unusually strong northerly winds created a bottleneck of ice near the mouth of the white sea, thus blocking the flow of ice and trapping the pups. These true-color images of the White Sea were acquired by the Moderate-resolution Imaging Spectroradiometer (MODIS), flying aboard NASA's Terra spacecraft. This image, taken May 2, 2000 that there is usually much less ice in the White Sea this time of year as most of it is typically en route to the

  7. Evaluating the effect of synchronized sea lice treatments in Chile.

    PubMed

    Arriagada, G; Stryhn, H; Sanchez, J; Vanderstichel, R; Campistó, J L; Rees, E E; Ibarra, R; St-Hilaire, S

    2017-01-01

    The sea louse is considered an important ectoparasite that affects farmed salmonids around the world. Sea lice control relies heavily on pharmacological treatments in several salmon-producing countries, including Chile. Among options for drug administration, immersion treatments represent the majority of antiparasitic control strategies used in Chile. As a topical procedure, immersion treatments do not induce a long lasting effect; therefore, re-infestation from neighbouring farms may undermine their efficacy. Synchronization of treatments has been proposed as a strategy to improve immersion treatment performance, but it has not been evaluated so far. Using a repeated-measures linear mixed-effect model, we evaluated the impact of treatment synchronization of neighbouring farms (within 10km seaway distance) on the adult lice mean abundance from weeks 2 to 8 post-treatment on rainbow trout and Atlantic salmon farms in Chile, while controlling for external and internal sources of lice before the treatments, and also for environmental and fish-related variables. Results indicate that treatment synchronization was significantly associated with lower adult lice levels from weeks 5 to 7 after treatment. This relationship appeared to be linear, suggesting that higher levels of synchronization may result in lower adult sea lice levels during these weeks. These findings suggest that synchronization can improve the performance of immersion delousing treatments by keeping sea lice levels low for a longer period of time. Our results may be applicable to other regions of the world where immersion treatments are widely used.

  8. Sea otter studies in Glacier Bay National Park and Preserve: annual report 2002

    USGS Publications Warehouse

    Bodkin, James L.; Kloecker, Kimberly A.; Esslinger, George G.; Monson, Daniel H.; Coletti, Heather A.; Doherty, Janet

    2003-01-01

    Glacier Bay prior to occupation and foraging by sea otters. Port Althorp sites were chosen to achieve a representative sample of subtidal clam beds already under prolonged foraging pressure by sea otters. There was no direct evidence of otter foraging at any of our Glacier Bay sampling sites. In Glacier Bay, we sampled 15,338 bivalves (average of 1,180/site) representing 14 species of clam, 2 species of mussel, and a single scallop and we sampled 6,917 urchins (average of 513/site). In Port Althorp, we sampled 1,034 bivalves (average of 207/site) representing 14 species of clam. We found only 5 urchins, all S. droebachiensis. Mean densities and biomass of all subtidal clams were significantly greater in Glacier Bay (59.2 and 99/0.25m2 compared to Port Althorp (10.3 and 5.8/0.25m2 (p Our contrasts of subtidal clam populations between Glacier Bay and Port Althorp suggest that clam densities will likely decline by about a factor of six and that clam biomass estimates will decline by more than a factor of ten. Numerically dominant species of clams, P. staminea, S. gigantea, Macoma sp. and Mya sp. were all significantly greater in density and biomass in Glacier Bay, while C. nutalli density was low but significantly higher in Port Althorp. Subtidal clam species diversity was significantly greater in Port Althorp compared to Glacier Bay, although this may simply reflect habitat differences. Sea urchin densities were high in Glacier Bay, while in Port Althorp urchins were virtually absent. Sea otters are now well established in limited areas of the lower portions of Glacier Bay. It is likely that distribution and numbers of sea otters will continue to increase in Glacier Bay in the near future. Glacier Bay supports large and diverse populations of clams that are largely unexploited by sea otters at present. It is predictable that the density and sizes of clam populations will decline in response to otter predation. This will result in fewer opportunities for human harvest, but

  9. The Dead Sea

    NASA Technical Reports Server (NTRS)

    2006-01-01

    The Dead Sea is the lowest point on Earth at 418 meters below sea level, and also one of the saltiest bodies of water on Earth with a salinity of about 300 parts-per-thousand (nine times greater than ocean salinity). It is located on the border between Jordan and Israel, and is fed by the Jordan River. The Dead Sea is located in the Dead Sea Rift, formed as a result of the Arabian tectonic plate moving northward away from the African Plate. The mineral content of the Dead Sea is significantly different from that of ocean water, consisting of approximately 53% magnesium chloride, 37% potassium chloride and 8% sodium chloride. In the early part of the 20th century, the Dead Sea began to attract interest from chemists who deduced that the Sea was a natural deposit of potash and bromine. From the Dead Sea brine, Israel and Jordan produce 3.8 million tons potash, 200,000 tons elemental bromine, 45,000 tons caustic soda, 25, 000 tons magnesium metal, and sodium chloride. Both countries use extensive salt evaporation pans that have essentially diked the entire southern end of the Dead Sea.

    With its 14 spectral bands from the visible to the thermal infrared wavelength region, and its high spatial resolution of 15 to 90 meters (about 50 to 300 feet), ASTER images Earth to map and monitor the changing surface of our planet.

    ASTER is one of five Earth-observing instruments launched December 18, 1999, on NASA's Terra satellite. The instrument was built by Japan's Ministry of Economy, Trade and Industry. A joint U.S./Japan science team is responsible for validation and calibration of the instrument and the data products.

    The broad spectral coverage and high spectral resolution of ASTER provides scientists in numerous disciplines with critical information for surface mapping, and monitoring of dynamic conditions and temporal change. Example applications are: monitoring glacial advances and retreats; monitoring potentially active volcanoes; identifying crop

  10. Preparing Educators of Adults.

    ERIC Educational Resources Information Center

    Grabowski, Stanley M.; And Others

    Model programs are described for two areas of adult education--the preparation of adult educators and the training conducted by adult educators. In Chapter One, Phyllis Caldwell reviews the literature concerning the preservice training of adult educators, concentrating on the competencies of adult education administrators and teachers. In Chapter…

  11. The Barents Sea. The White Sea (Barentsovo More. Beloe More),

    DTIC Science & Technology

    fauna and flora of the water basins are analyzed, pointing out the typical specimens and variations in species inhabiting the White Sea which has a higher salinity and lower water temperature than the Barents Sea. (Author)

  12. Diel patterns in sea urchin activity and predation on sea urchins on the Great Barrier Reef

    NASA Astrophysics Data System (ADS)

    Young, M. A. L.; Bellwood, D. R.

    2011-09-01

    Understanding diel patterns in sea urchin activity is important when assessing sea urchin populations and when interpreting their interactions with predators. Here we employ a combination of surveys and a non-invasive tethering technique to examine these patterns in an intact coral reef system on the Great Barrier Reef (GBR). We also assess local scale variation in relative diurnal predation pressure. Surveys revealed that sea urchins were active and exposed at night. Echinometra mathaei and Echinothrix calamaris were the most abundant species with significantly higher night densities (0.21 and 0.03 ind. m-2, respectively), than daytime densities (0.05 and 0.001, respectively). Bioassays revealed that exposed adult E. mathaei (the most abundant sea urchin species) were 30.8 times more likely to be eaten during the day than at night when controlling for sites. This observation concurs with widely held assumptions that nocturnal activity is a risk-related adaptive response to diurnal predation pressure. Despite relatively intact predator communities on the GBR, potential predation pressure on diurnally exposed E. mathaei assays was variable at a local scale and the biomass of potential fish predators at each site was a poor predictive measure of this variation. Patterns in predation appear to be more complex and variable than we may have assumed.

  13. Caribbean Sea Level Network

    NASA Astrophysics Data System (ADS)

    von Hillebrandt-Andrade, C.; Crespo Jones, H.

    2012-12-01

    Over the past 500 years almost 100 tsunamis have been observed in the Caribbean and Western Atlantic, with at least 3510 people having lost their lives to this hazard since 1842. Furthermore, with the dramatic increase in population and infrastructure along the Caribbean coasts, today, millions of coastal residents, workers and visitors are vulnerable to tsunamis. The UNESCO IOC Intergovernmental Coordination Group for Tsunamis and other Coastal Hazards for the Caribbean and Adjacent Regions (CARIBE EWS) was established in 2005 to coordinate and advance the regional tsunami warning system. The CARIBE EWS focuses on four areas/working groups: (1) Monitoring and Warning, (2) Hazard and Risk Assessment, (3) Communication and (4) Education, Preparedness and Readiness. The sea level monitoring component is under Working Group 1. Although in the current system, it's the seismic data and information that generate the initial tsunami bulletins, it is the data from deep ocean buoys (DARTS) and the coastal sea level gauges that are critical for the actual detection and forecasting of tsunamis impact. Despite multiple efforts and investments in the installation of sea level stations in the region, in 2004 there were only a handful of sea level stations operational in the region (Puerto Rico, US Virgin Islands, Bermuda, Bahamas). Over the past 5 years there has been a steady increase in the number of stations operating in the Caribbean region. As of mid 2012 there were 7 DARTS and 37 coastal gauges with additional ones being installed or funded. In order to reach the goal of 100 operational coastal sea level stations in the Caribbean, the CARIBE EWS recognizes also the importance of maintaining the current stations. For this, a trained workforce in the region for the installation, operation and data analysis and quality control is considered to be critical. Since 2008, three training courses have been offered to the sea level station operators and data analysts. Other

  14. Geology of Barents Sea

    SciTech Connect

    Riis, F.; Vollset, J.

    1984-09-01

    The Barents Sea is situated on the continental shelf between Norway, the Spitsbergen Islands, and Novaya Zemlya. The main structural framework of the area was formed during the Caledonian and Hercynian orogenies, whereas the western parts were reactivated by the Kimmerian and Alpine orogenies. Because of the complex opening of the Greenland Norwegian Sea, important tertiary reactivation of Mesozoic normal faults occurred along southwest-northeast-trending systems of wrench faults. Owing to substantial erosion in the late Tertiary, the subsidence history and thermal development are more difficult to unravel in this area than in other places along the Norwegian Shelf. The erosion products were deposited in a huge sedimentary wedge extending onto the oceanic crust. The hydrocarbon discoveries in the Troms area in the southern part of the Barents Sea are encouraging for further exploration. However, the petroleum potential for large areas is not well known at this stage.

  15. Dynamics of sea level variations in the coastal Red Sea

    NASA Astrophysics Data System (ADS)

    Churchill, James; Abulnaja, Yasser; Nellayaputhenpeedika, Mohammedali; Limeburner, Richard; Lentz, Steven

    2016-04-01

    Sea level variations in the central Red Sea coastal zone span a range of roughly 1.2 m. Though relatively small, these water level changes can significantly impact the environment over the shallow reef tops prevalent in the central Red Sea, altering the water depth by a factor or two or more. While considerable scientific work has been directed at tidal and seasonal variations of Red Sea water level, very little attention has been given to elevation changes in an 'intermediate' frequency band, with periods of 2-30 d, even though motions in this band account for roughly half of the sea level variance in central Red Sea. We examined the sea level signal in this band using AVISO sea level anomaly (SLA) data, COARDAS wind data and measurements from pressure sensors maintained for more than five years at a number of locations in Saudi Arabian coastal waters. Empirical orthogonal function analysis of the SLA data indicates that longer-period (10-30 d) sea level variations in the intermediate band are dominated by coherent motions in a single mode that extends over most of the Red Sea axis. Idealized model results indicate that this large-scale mode of sea level motion is principally due to variations in the large-scale gradient of the along-axis wind. Our analysis indicates that coastal sea level motions at shorter periods (2-10 d) are principally generated by a combination of direct forcing by the local wind stress and forcing associated with large-scale wind stress gradients. However, also contributing to coastal sea level variations in the intermediate frequency band are mesoscale eddies, which are prevalent throughout the Red Sea basin, have a sea level signal of 10's of cm and produce relatively small-scale (order 50 km) changes in coastal sea level.

  16. Understanding Sea Level Changes

    NASA Technical Reports Server (NTRS)

    Chao, Benjamin F.

    2004-01-01

    Today more than 100 million people worldwide live on coastlines within one meter of mean sea level; any short-term or long-term sea level change relative to vertical ground motion is of great societal and economic concern. As palm-environment and historical data have clearly indicated the existence and prevalence of such changes in the past, new scientific information regarding to the nature and causes and a prediction capability are of utmost importance for the future. The 10-20 cm global sea-level rise recorded over the last century has been broadly attributed to two effects: (1) the steric effect (thermal expansion and salinity-density compensation of sea water) following global climate; (2) mass-budget changes due to a number of competing geophysical and hydrological processes in the Earth-atmosphere-hydrosphere-cryosphere system, including water exchange from polar ice sheets and mountain glaciers to the ocean, atmospheric water vapor and land hydrological variations, and anthropogenic effects such as water impoundment in artificial reservoirs and extraction of groundwater, all superimposed on the vertical motions of solid Earth due to tectonics, rebound of the mantle from past and present deglaciation, and other local ground motions. As remote-sensing tools, a number of space geodetic measurements of sea surface topography (e.g., TOPEX/Poseidon, Jason), ice mass (e.g., ICESat), time-variable gravity (e.g. GRACE), and ground motions (SLR, VLBI, GPS, InSAR, Laser altimetry, etc.) become directly relevant. Understanding sea level changes "anywhere, anytime" in a well-defined terrestrial reference frame in terms of climate change and interactions among ice masses, oceans, and the solid Earth, and being able to predict them, emerge as one of the scientific challenges in the Solid Earth Science Working Group (SESWG, 2003) conclusions.

  17. Personality dimensions of the captive California sea lion (Zalophus californianus).

    PubMed

    Ciardelli, Lillian E; Weiss, Alexander; Powell, David M; Reiss, Diana

    2017-02-01

    Although the field of animal personality research is growing, information on sea lion personality is lacking. This is surprising as sea lions are charismatic, cognitively advanced, and relatively accessible for research. In addition, their presence in captivity and frequent interactions with humans allow for them to be closely observed in various contexts. These interactions provide a valuable and unique opportunity to assess dimensions of their personality. This study created a personality survey for captive California sea lions (Zalophus californianus) using a 3-step approach that balances comprehensiveness and comparability to other species. Zookeepers (N = 43) at 5 zoological parks rated sea lions (N = 16) on 52 personality traits and 7 training traits. A principal components analysis and regularized exploratory factor analysis revealed 3 dimensions (Extraversion/Impulsivity, Dominance/Confidence, and Reactivity/Undependability). Each dimension was significantly correlated with at least 1 training trait. Pups and juveniles scored significantly higher on Extraversion/Impulsivity than adults. No other age or sex effects were present on this or any other dimension. Sea lions are cognitively complex marine mammals that represent a valuable addition to the group of species in which personality structure and function have been studied. The unique behavioral and ecological characteristics of sea lions offer another vantage point for understanding how personality varies between disparate species. (PsycINFO Database Record

  18. Arctic Sea Ice Maximum 2011

    NASA Video Gallery

    AMSR-E Arctic Sea Ice: September 2010 to March 2011: Scientists tracking the annual maximum extent of Arctic sea ice said that 2011 was among the lowest ice extents measured since satellites began ...

  19. Adults Need Vaccines, Too!

    MedlinePlus

    ... turn JavaScript on. Feature: Adult Vaccinations Adults Need Vaccines, Too! Past Issues / Summer 2015 Table of Contents ... of the millions of adults not receiving the vaccines you need? What vaccines do you need? All ...

  20. Brain tumor - primary - adults

    MedlinePlus

    ... Vestibular schwannoma (acoustic neuroma) - adults; Meningioma - adults; Cancer - brain tumor (adults) ... Primary brain tumors include any tumor that starts in the brain. Primary brain tumors can start from brain cells, ...

  1. Adult Day Care

    MedlinePlus

    ... Page Resize Text Printer Friendly Online Chat Adult Day Care Adult Day Care Centers are designed to provide care and ... adults who need assistance or supervision during the day. Programs offer relief to family members and caregivers, ...

  2. Adult Still's disease

    MedlinePlus

    Still's disease - adult; AOSD ... than 1 out of 100,000 people develop adult-onset Still's disease each year. It affects women more often than men. The cause of adult Still's disease is unknown. No risk factors for ...

  3. Reproductive and larval cycle of the scallop Argopecten purpuratus (Ostreoida: Pectinidae), during El Niño-La Niña events and normal weather conditions in Antofagasta, Chile.

    PubMed

    Avendaño, Miguel; Cantillánez, Marcela; Le Pennec, Marcel; Thouzeau, Gérard

    2008-03-01

    Seasonality, amplitude, and magnitude of spawning events were determined for Argopecten purpuratus in the La Rinconada marine reserve, Antofagasta, Chile, between December 1995 and January 2004. During the same period, samples of scallop larvae were obtained in vertical plankton hauls recovered within this reserve in an area routinely exposed to circular, gyre-like currents which helped retain the larvae within the bay. The reproduction of this population in normal or cool (e.g. "La Niña", 1998-2000) years occurred throughout the year, with a more active period between September and April, declining in June and August; this contrasted with the warmer "El Niño" oceanographic period of 1997-98 in which reproductive activity was more intense and prolonged throughout the entire year. The reproductive events in this population were mostly synchronous, although one asynchronous period occurred each year following the more intense March to May spawnings. This reproductive activity generated a continuous presence of larvae in the area in which no strict relation could be found between the intensities of spawning and numbers of larvae in the water. Larval presence was, however, generally correlated with active spawning periods. Important increases in larval numbers recorded at the end of 1999 and the beginning of 2003 were correlated with census data showing a higher percentage presence of broodstock over 90 mm in shell length during these years. An adequate stock of this size class is needed for a successful seed capture program in the reserve (for mass culture).

  4. Mercury and Selenium in Muscle and Target Organs of Scalloped Hammerhead Sharks Sphyrna lewini of the SE Gulf of California: Dietary Intake, Molar Ratios, Loads, and Human Health Risks.

    PubMed

    Bergés-Tiznado, Magdalena E; Márquez-Farías, Fernando; Lara-Mendoza, Raúl E; Torres-Rojas, Yassir E; Galván-Magaña, Felipe; Bojórquez-Leyva, Humberto; Páez-Osuna, Federico

    2015-11-01

    Selenium and mercury were evaluated in muscle, liver, kidney, brain, and the stomach contents of juvenile scalloped hammerhead shark Sphyrna lewini. Se:Hg molar ratios were calculated. The average Hg levels in muscle ranged from 0.12 to 1.17 μg/g (wet weight); Hg was <0.39 μg/g in liver and kidneys and <0.19 μg/g in brain. The lowest value of Se was found in muscle (0.4 μg/g) and the highest in kidney (26.7 μg/g). An excess of Se over Hg was found, with Se:Hg molar ratios >1. Correlations were found for Hg in muscle with size, age, and weight, and also for Hg in liver with size, age, and weight. Hg in muscle was significantly positive correlated to Hg in brain as well as Hg in liver was correlated to Hg in kidney. The highest Hg in preys was for carangid fishes; scombrid and carangid fishes contributed with the highest Se levels. Results suggest that more than 98 % of the total Hg and 62 % of Se end up in muscle and might be affected by factors, such as geographical area, age, size, and feeding habits. The muscle of S. lewini should be consumed by people cautiously so as not to exceed the recommended intake per week.

  5. Seafloor Control on Sea Ice

    NASA Technical Reports Server (NTRS)

    Nghiem, S. V.; Clemente-Colon, P.; Rigor, I. G.; Hall, D. K.; Neumann, G.

    2011-01-01

    The seafloor has a profound role in Arctic sea ice formation and seasonal evolution. Ocean bathymetry controls the distribution and mixing of warm and cold waters, which may originate from different sources, thereby dictating the pattern of sea ice on the ocean surface. Sea ice dynamics, forced by surface winds, are also guided by seafloor features in preferential directions. Here, satellite mapping of sea ice together with buoy measurements are used to reveal the bathymetric control on sea ice growth and dynamics. Bathymetric effects on sea ice formation are clearly observed in the conformation between sea ice patterns and bathymetric characteristics in the peripheral seas. Beyond local features, bathymetric control appears over extensive ice-prone regions across the Arctic Ocean. The large-scale conformation between bathymetry and patterns of different synoptic sea ice classes, including seasonal and perennial sea ice, is identified. An implication of the bathymetric influence is that the maximum extent of the total sea ice cover is relatively stable, as observed by scatterometer data in the decade of the 2000s, while the minimum ice extent has decreased drastically. Because of the geologic control, the sea ice cover can expand only as far as it reaches the seashore, the continental shelf break, or other pronounced bathymetric features in the peripheral seas. Since the seafloor does not change significantly for decades or centuries, sea ice patterns can be recurrent around certain bathymetric features, which, once identified, may help improve short-term forecast and seasonal outlook of the sea ice cover. Moreover, the seafloor can indirectly influence cloud cover by its control on sea ice distribution, which differentially modulates the latent heat flux through ice covered and open water areas.

  6. 50 CFR 648.62 - Northern Gulf of Maine (NGOM) Management Program.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... Management Measures for the Atlantic Sea Scallop Fishery § 648.62 Northern Gulf of Maine (NGOM) Management... boundaries of the Gulf of Maine Scallop Dredge Exemption Area as specified in § 648.80(a)(11). To fish for or... § 648.23(b), no vessel issued a scallop permit pursuant to § 648.4(a)(2) may possess, retain, or...

  7. Mechanisms and functional morphology associated with metal transport in Mercenaria mercenaria (Bivalvia:Mollusca)

    SciTech Connect

    Robinson, W.E.; Morse, M.P.

    1984-02-20

    Studies on the morphological and physiological effects of environmental pollutants on both adult and larval marine bivalve molluscs are described. We have established a substantial data base on metals accumulation within individual organs of the quahog, Mercenaria mercenaria. In addition, studies on the transport, detoxification and elimination of cadmium and silver in this important species are reported. We have shown that various components of marine oilwell drilling muds can have deleterious effects on both adult sea scallops, Placopecten magellanicus, and surf clams, Spisula solidissima. For example, both Q-broxin and attapulgite clay, at concentrations as low as 100 mg 1/sup -1/, effected both the integrity of the sea scallop pseudolamellibranch gill and the rate of gill frontal ciliary activity.

  8. Deep-sea pennatulaceans (sea pens) - recent discoveries, morphological adaptations, and responses to benthic oceanographic parameters

    NASA Astrophysics Data System (ADS)

    Williams, G. C.

    2015-12-01

    Pennatulaceans are sessile, benthic marine organisms that are bathymetrically wide-ranging, from the intertidal to approximately 6300 m in depth, and are conspicuous constituents of deep-sea environments. The vast majority of species are adapted for anchoring in soft sediments by the cylindrical peduncle - a muscular hydrostatic skeleton. However, in the past decade a few species ("Rockpens") have been discovered and described that can attach to hard substratum such as exposed rocky outcrops at depths between 669 and 1969 m, by a plunger-like adaptation of the base of the peduncle. Of the thirty-six known genera, eleven (or 30%) have been recorded from depths greater than 1000 m. The pennatulacean depth record holders are an unidentified species of Umbellula from 6260 m in the Peru-Chile Trench and a recently-discovered and described genus and species, Porcupinella profunda, from 5300 m the Porcupine Abyssal Plain of the northeastern Atlantic. A morphologically-differentiated type of polyp (acrozooid) have recently been discovered and described in two genera of shallow-water coral reef sea pens. Acrozooids apparently represent asexual buds and presumably can detach from the adult to start clonal colonies through asexual budding. Acrozooids are to be expected in deep-sea pennatulaceans, but so far have not been observed below 24 m in depth. Morphological responses at depths greater than 1000 m in deep-sea pennatulaceas include: fewer polyps, larger polyps, elongated stalks, and clustering of polyps along the rachis. Responses to deep-ocean physical parameters and anthropogenic changes that could affect the abundance and distribution of deep-sea pennatulaceans include changes in bottom current flow and food availability, changes in seawater temperature and pH, habitat destruction by fish trawling, and sunken refuse pollution. No evidence of the effects of ocean acidification or other effects of anthropogenic climate change in sea pens of the deep-sea has been

  9. Alaska and Bering Sea Bloom

    NASA Technical Reports Server (NTRS)

    2002-01-01

    Alaska was relatively clear as was part of the Bering Sea where the aquamarine bloom is still visible in this SeaWiFS image. Credit: Provided by the SeaWiFS Project, NASA/Goddard Space Flight Center, and ORBIMAGE

  10. The National Sea Grant Program.

    ERIC Educational Resources Information Center

    Spector, Barbara S.

    1980-01-01

    Described is the National Sea Grant College Program which supports education and training, research, and advisory extension services through the National Office of Sea Grant and the Sea Grant Network of 30 programs in coastal and Great Lake states. Water-related topics include water's relationship to nature, society, and human expression.…

  11. Solar Sea Power

    ERIC Educational Resources Information Center

    Zener, Clarence

    1976-01-01

    In their preoccupation with highly complex new energy systems, scientists and statesmen may be overlooking the possibilities of Ocean Thermal Energy Conversion (OTEC). That is the view of a Carnegie-Mellon University physicist who is in the forefront of solar sea power investigation. (Author/BT)

  12. The Provident Sea

    NASA Astrophysics Data System (ADS)

    Cushing, David H.

    1988-09-01

    The Provident Sea describes the history of fish stock management (including whales and seals). The book traces, on the basis of the original scientific material, the history of the management of "the provident sea" up to recent times when problems of over-exploitation have had dramatic effects upon stocks. The need for management arose mainly from the increasing industrialization of capture. Hence the preindustrial fisheries are covered, in particular the old cod fishery on the Grand Bank and the herring fishery in the North Sea, as an essential background to current problems. The origins of fisheries and whaling science are described, as is the development up to 1965 of the science and institution in fisheries, whaling, and sealing. In the sixties and seventies, certain major fishing nations took a heavy harvest of fish stocks using sophisticated and efficient gathering methods. This in turn led to conflict and one consequence was the "Law of the Sea" conference set up to try and resolve these issues.

  13. Harvesting the Sea.

    ERIC Educational Resources Information Center

    Markle, Sandra

    1989-01-01

    Information on commercial fishing is provided, and a board game is described which requires students to watch for ocean signs of good fishing, choose equipment to catch specific types of fish, and consider effects of weather on working at sea. A reproducible copy of the game, with instructions, is included. (IAH)

  14. Virtual sea border

    NASA Astrophysics Data System (ADS)

    Ferriere, D.; Rucinski, A.; Jankowski, T.

    2007-04-01

    Establishing a Virtual Sea Border by performing a real-time, satellite-accessible Internet-based bio-metric supported threat assessment of arriving foreign-flagged cargo ships, their management and ownership, their arrival terminal operator and owner, and rewarding proven legitimate operators with an economic incentive for their transparency will simultaneously improve port security and maritime transportation efficiencies.

  15. Egyptian Sea Cave

    ERIC Educational Resources Information Center

    Journal of College Science Teaching, 2005

    2005-01-01

    This brief article describes an archaeological expedition to the Red Sea coast area of Egypt in 2004. Kathryn Bard, an associate professor of archaeology at Boston University, along with her team, discovered the well-preserved cedar timbers of an ancient Egyptian seafaring vessel near the entrance to a large man-made cave. Limestone tablets with…

  16. Solomon's Sea and [Pi

    ERIC Educational Resources Information Center

    Simoson, Andrew J.

    2009-01-01

    This paper is a whimsical survey of the various explanations which might account for the biblical passage in I Kings 7:23 that describes a round object--a bronze basin called Solomon's Sea--as having diameter ten cubits and circumference thirty cubits. Can the biblical pi be any number other than 3? We offer seven different perspectives on this…

  17. Ships to the Sea.

    ERIC Educational Resources Information Center

    Department of the Navy, Washington, DC.

    This lesson contains materials for the U.S. Navy Museum's "Ships to the Sea" program. The program is appropriate for students in grades 2-4 and was designed in accordance with local and national social studies standards. The materials introduce students to the world of ship technology and naval terminology. The lesson is presented in…

  18. Sea Grant's Education Mission.

    ERIC Educational Resources Information Center

    Sherman, Douglas

    1998-01-01

    Considers the status of the education agenda of the Sea Grant Program as it turns 30. Projects described include Operation Pathfinder, which aims to educate minority teachers and/or teachers of minority students. Also described are a program in which seafood processors and resellers are trained in safety and health areas, and programs to train…

  19. The Cosmonaut Sea Wedge

    USGS Publications Warehouse

    Solli, K.; Kuvaas, B.; Kristoffersen, Y.; Leitchenkov, G.; Guseva, J.; Gandyukhin, V.

    2007-01-01

    A set of multi-channel seismic profiles (~15000 km) acquired by Russia, Norway and Australia has been used to investigate the depositional evolution of the Cosmonaut Sea margin of East Antarctica. We recognize a regional sediment wedge below the upper part of the continental rise. The wedge, herein termed the Cosmonaut Sea Wedge, is positioned stratigraphically underneath the inferred glaciomarine section and extends for at least 1200 km along the continental margin and from 80 to about 250 km seaward or to the north. Lateral variations in the growth pattern of the wedge indicate several overlapping depocentres, which at their distal northern end are flanked by elongated mounded drifts and contourite sheets. The internal stratification of the mounded drift deposits suggests that westward flowing bottom currents reworked the marginal deposits. The action of these currents together with sea-level changes is considered to have controlled the growth of the wedge. We interpret the Cosmonaut Sea Wedge as a composite feature comprising several bottom current reworked fan systems.

  20. Classroom of the Sea.

    ERIC Educational Resources Information Center

    Hupper, Mary Laporta; Monte, Denise; Scheifele, Peter

    2000-01-01

    Introduces the Sea Program in which participant students were deaf and collaborated with a bioacoustician. Studies the underwater noise levels of the Gulf of Maine and the possible impacts on marine life. Explains implementing this project in the science curriculum. (YDS)

  1. Sea-Level Projections from the SeaRISE Initiative

    NASA Technical Reports Server (NTRS)

    Nowicki, Sophie; Bindschadler, Robert

    2011-01-01

    SeaRISE (Sea-level Response to Ice Sheet Evolution) is a community organized modeling effort, whose goal is to inform the fifth IPCC of the potential sea-level contribution from the Greenland and Antarctic ice sheets in the 21st and 22nd century. SeaRISE seeks to determine the most likely ice sheet response to imposed climatic forcing by initializing an ensemble of models with common datasets and applying the same forcing to each model. Sensitivity experiments were designed to quantify the sea-level rise associated with a change in: 1) surface mass balance, 2) basal lubrication, and 3) ocean induced basal melt. The range of responses, resulting from the multi-model approach, is interpreted as a proxy of uncertainty in our sea-level projections. http://websrv.cs .umt.edu/isis/index.php/SeaRISE_Assessment.

  2. Northern Sand Sea

    NASA Technical Reports Server (NTRS)

    2005-01-01

    [figure removed for brevity, see original site]

    Our topic for the weeks of April 4 and April 11 is dunes on Mars. We will look at the north polar sand sea and at isolated dune fields at lower latitudes. Sand seas on Earth are often called 'ergs,' an Arabic name for dune field. A sand sea differs from a dune field in two ways: 1) a sand sea has a large regional extent, and 2) the individual dunes are large in size and complex in form.

    This VIS image was taken at 82 degrees North latitude during Northern spring. The image is completely dominated by dunes. In sand seas, it is very common for a single type of dune to occur, and for a single predominate wind to control the alignment of the dunes.

    Image information: VIS instrument. Latitude 82.2, Longitude 152.5 East (207.5 West). 19 meter/pixel resolution.

    Note: this THEMIS visual image has not been radiometrically nor geometrically calibrated for this preliminary release. An empirical correction has been performed to remove instrumental effects. A linear shift has been applied in the cross-track and down-track direction to approximate spacecraft and planetary motion. Fully calibrated and geometrically projected images will be released through the Planetary Data System in accordance with Project policies at a later time.

    NASA's Jet Propulsion Laboratory manages the 2001 Mars Odyssey mission for NASA's Office of Space Science, Washington, D.C. The Thermal Emission Imaging System (THEMIS) was developed by Arizona State University, Tempe, in collaboration with Raytheon Santa Barbara Remote Sensing. The THEMIS investigation is led by Dr. Philip Christensen at Arizona State University. Lockheed Martin Astronautics, Denver, is the prime contractor for the Odyssey project, and developed and built the orbiter. Mission operations are conducted jointly from Lockheed Martin and from JPL, a division of the California Institute of Technology in Pasadena.

  3. Diversity of olfactomedin proteins in the sea urchin.

    PubMed

    Hillier, Brian J; Moy, Gary W; Vacquier, Victor D

    2007-06-01

    Olfactomedin (OLF) domain proteins maintain extracellular protein-protein interactions in diverse phyla. Only one OLF family member, amassin-1, has been described from the sea urchin Strongylocentrotus purpuratus, a basal invertebrate deuterostome. Amassin-1 mediates intercellular adhesion of coelomocytes (immunocytes). Here we describe the protein structural features of four additional OLF proteins, the total for the genome being five. Phylogenetically, four of these proteins (the amassins) form a subgroup among previously identified OLF proteins. The fifth OLF protein is within the colmedin subfamily and contains a type II transmembrane domain, collagen repeats, and an OLF domain. Sea urchin OLF proteins represent an intermediate diversification between protostomes and vertebrates. Transcripts of all five OLF family members are in coelomocytes and adult radial nerve tissue. Transcripts for some OLF proteins increase during late larval stages. Transcript levels for amassin-1 increase 1,000,000-fold, coinciding with formation of the adult urchin rudiment within the larval body.

  4. Direct observations of American eels migrating across the continental shelf to the Sargasso Sea

    PubMed Central

    Béguer-Pon, Mélanie; Castonguay, Martin; Shan, Shiliang; Benchetrit, José; Dodson, Julian J.

    2015-01-01

    Since inferring spawning areas from larval distributions in the Sargasso Sea a century ago, the oceanic migration of adult American eels has remained a mystery. No adult eel has ever been observed migrating in the open ocean or in the spawning area. Here, we track movements of maturing eels equipped with pop-up satellite archival tags from the Scotian Shelf (Canada) into the open ocean, with one individual migrating 2,400 km to the northern limit of the spawning site in the Sargasso Sea. The reconstructed routes suggest a migration in two phases: one over the continental shelf and along its edge in shallow waters; the second in deeper waters straight south towards the spawning area. This study is the first direct evidence of adult Anguilla migrating to the Sargasso Sea and represents an important step forward in the understanding of routes and migratory cues. PMID:26505325

  5. Direct observations of American eels migrating across the continental shelf to the Sargasso Sea.

    PubMed

    Béguer-Pon, Mélanie; Castonguay, Martin; Shan, Shiliang; Benchetrit, José; Dodson, Julian J

    2015-10-27

    Since inferring spawning areas from larval distributions in the Sargasso Sea a century ago, the oceanic migration of adult American eels has remained a mystery. No adult eel has ever been observed migrating in the open ocean or in the spawning area. Here, we track movements of maturing eels equipped with pop-up satellite archival tags from the Scotian Shelf (Canada) into the open ocean, with one individual migrating 2,400 km to the northern limit of the spawning site in the Sargasso Sea. The reconstructed routes suggest a migration in two phases: one over the continental shelf and along its edge in shallow waters; the second in deeper waters straight south towards the spawning area. This study is the first direct evidence of adult Anguilla migrating to the Sargasso Sea and represents an important step forward in the understanding of routes and migratory cues.

  6. 50 CFR 648.1 - Purpose and scope.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ...-sea red crab fishery (Deep-Sea Red Crab FMP); the tilefish fishery (Tilefish FMP); and the NE skate... Salmon FMP); the Atlantic sea scallop fishery (Scallop FMP); the Atlantic surfclam and ocean quahog... Multispecies FMP) and (Monkfish FMP)); the summer flounder, scup, and black sea bass fisheries (Summer...

  7. 50 CFR 648.1 - Purpose and scope.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ...-sea red crab fishery (Deep-Sea Red Crab FMP); the tilefish fishery (Tilefish FMP); and the NE skate... Salmon FMP); the Atlantic sea scallop fishery (Scallop FMP); the Atlantic surfclam and ocean quahog... Multispecies FMP) and (Monkfish FMP)); the summer flounder, scup, and black sea bass fisheries (Summer...

  8. 50 CFR 648.1 - Purpose and scope.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ...-sea red crab fishery (Deep-Sea Red Crab FMP); the tilefish fishery (Tilefish FMP); and the NE skate... Salmon FMP); the Atlantic sea scallop fishery (Scallop FMP); the Atlantic surfclam and ocean quahog... Multispecies FMP) and (Monkfish FMP)); the summer flounder, scup, and black sea bass fisheries (Summer...

  9. Sea ice/climate studies

    NASA Technical Reports Server (NTRS)

    Parkinson, C. L.

    1988-01-01

    The objectives were to determine and analyze the annual cycle of sea ice extents in the Arctic Ocean and peripheral seas and bays over the period 1973 to 1986, looking in particular for any long term trends; to examine the relationship between local sea ice covers and the surrounding atmosphere and ocean; and to examine sea ice as a potential early indicator of climate change. The work involves creating regional and hemispheric time series of sea ice variables from satellite passive microwave data and analyzing these through various intercomparisons amongst themselves and with oceanographic and atmospheric fields.

  10. Fish predation on sea urchins on the Great Barrier Reef

    NASA Astrophysics Data System (ADS)

    Young, M. A. L.; Bellwood, D. R.

    2012-09-01

    Predators are important for regulating adult sea urchin densities. Here, we employ remote underwater video cameras to record diurnal predation on tethered sea urchins at Lizard Island on the Great Barrier Reef (GBR). We identified four fish predators of adult sea urchins ( Balistoides viridescens, Balistapus undulatus, Lethrinus atkinsoni and Choerodon schoenleinii). Predator activity appeared to be site-specific. Balistoides viridescens and B. undulatus (f: Balistidae) were the two most important predators of Echinometra mathaei with the former handling E. mathaei significantly faster (mean 0.7 min) than B. undulatus (5.2 min). Balistoides viridescens also successfully preyed on 70 % of detections, while C. schoenleinii, B. undulatus and L. atkinsoni preyed on just 33, 17 and <1 %, respectively. Additionally, B. viridescens were behaviourally dominant among predator species and were observed as aggressors in 30 encounters with B. undulatus and 8 encounters with L. atkinsoni. In only one encounter was B. viridescens the recipient of any aggression (from B. undulatus). In terms of relative vulnerability, of the three sea urchin species examined, E. mathaei were more vulnerable to predation than Diadema setosum or Echinothrix calamaris, with mean handling times of 1.2, 4.8 and 10.3 min, respectively. Balistoides viridescens and B. undulatus both appear to be able to play an important role as predators of sea urchins on the relatively intact coral reefs of Lizard Island. However, B. viridescens emerge as the most efficient predator in terms of handling speed and the proportion of detections preyed upon. They were also the behaviourally dominant predator. This preliminary study of the predators of sea urchins on the GBR highlights the potential significance of relatively scarce but functionally important species.

  11. Polygenetic Karsted Hardground Omission Surfaces in Lower Silurian Neritic Limestones: a Signature of Early Paleozoic Calcite Seas

    NASA Astrophysics Data System (ADS)

    James, Noel P.; Desrochers, André; Kyser, Kurt T.

    2015-04-01

    Exquisitely preserved and well-exposed rocky paleoshoreline omission surfaces in Lower Silurian Chicotte Formation limestones on Anticosti Island, Quebec, are interpreted to be the product of combined marine and meteoric diagenesis. The different omission features include; 1) planar erosional bedding tops, 2) scalloped erosional surfaces, 3) knobs, ridges, and swales at bedding contacts, and 4) paleoscarps. An interpretation is proposed that relates specific omission surface styles to different diagenetic-depositional processes that took place in separate terrestrial-peritidal-shallow neritic zones. Such processes were linked to fluctuations in relative sea level with specific zones of diagenesis such as; 1) karst corrosion, 2) peritidal erosion, 3) subtidal seawater flushing and cementation, and 4) shallow subtidal deposition. Most surfaces are interpreted to have been the result of initial extensive shallow-water synsedimentary lithification that were, as sea level fell, altered by exposure and subaerial corrosion, only to be buried by sediments as sea level rose again. This succession was repeated several times resulting in a suite of recurring polyphase omission surfaces through many meters of stratigraphic section. Synsedimentary cloudy marine cements are well preserved and are thus interpreted to have been calcitic originally. Aragonite components are rare and thought to have to have been dissolved just below the Silurian seafloor. Large molluscs that survived such seafloor removal were nonetheless leached and the resultant megamoulds were filled with synsedimentary calcite cement. These Silurian inner neritic-strandline omission surfaces are temporally unique. They are part of a suite of marine omission surfaces that are mostly found in early Paleozoic neritic carbonate sedimentary rocks. These karsted hardgrounds formed during a calcite-sea time of elevated marine carbonate saturation and extensive marine cement precipitation. The contemporaneous greenhouse

  12. Sea Turtle Navigation and the Detection of Geomagnetic Field Features

    NASA Astrophysics Data System (ADS)

    Lohmann, Kenneth J.; Lohmann, Catherine M. F.

    The lives of sea turtles consist of a continuous series of migrations. As hatchlings, the turtles swim from their natal beaches into the open sea, often taking refuge in circular current systems (gyres) that serve as moving, open-ocean nursery grounds. The juveniles of many populations subsequently take up residence in coastal feeding areas that are located hundreds or thousands of kilometres from the beaches on which the turtles hatched; some juveniles also migrate between summer and winter habitats. As adults, turtles periodically leave their feeding grounds and migrate to breeding and nesting regions, after which many return to their own specific feeding sites. The itinerant lifestyle characteristic of most sea turtle species is thus inextricably linked to an ability to orient and navigate accurately across large expanses of seemingly featureless ocean.In some sea turtle populations, migratory performance reaches extremes. The total distances certain green turtles (Chelonia mydas) and loggerheads (Caretta caretta) traverse over the span of their lifetimes exceed tens of thousands of kilometres, several times the diameter of the turtle's home ocean basin. Adult migrations between feeding and nesting habitats can require continuous swimming for periods of several weeks. In addition, the paths of migrating turtles often lead almost straight across the open ocean and directly to the destination, leaving little doubt that turtles can navigate to distant target sites with remarkable efficiency.

  13. Adult Recruitment Practices.

    ERIC Educational Resources Information Center

    Kaufman, Juliet, Ed.; And Others

    Findings of an American College Testing Program 1981 survey on college recruitment of adult students are summarized, and 12 articles on adult recruitment are presented. Titles and authors are as follows: "Adult Recruitment Practices: A Report of a National Survey" (Patricia Spratt, Juliet Kaufmann, Lee Noel); "Three Programs for Adults in Shopping…

  14. The North Sea - A shelf sea in the Anthropocene

    NASA Astrophysics Data System (ADS)

    Emeis, Kay-Christian; van Beusekom, Justus; Callies, Ulrich; Ebinghaus, Ralf; Kannen, Andreas; Kraus, Gerd; Kröncke, Ingrid; Lenhart, Hermann; Lorkowski, Ina; Matthias, Volker; Möllmann, Christian; Pätsch, Johannes; Scharfe, Mirco; Thomas, Helmuth; Weisse, Ralf; Zorita, Eduardo

    2015-01-01

    Global and regional change clearly affects the structure and functioning of ecosystems in shelf seas. However, complex interactions within the shelf seas hinder the identification and unambiguous attribution of observed changes to drivers. These include variability in the climate system, in ocean dynamics, in biogeochemistry, and in shelf sea resource exploitation in the widest sense by societies. Observational time series are commonly too short, and resolution, integration time, and complexity of models are often insufficient to unravel natural variability from anthropogenic perturbation. The North Sea is a shelf sea of the North Atlantic and is impacted by virtually all global and regional developments. Natural variability (from interannual to multidecadal time scales) as response to forcing in the North Atlantic is overlain by global trends (sea level, temperature, acidification) and alternating phases of direct human impacts and attempts to remedy those. Human intervention started some 1000 years ago (diking and associated loss of wetlands), expanded to near-coastal parts in the industrial revolution of the mid-19th century (river management, waste disposal in rivers), and greatly accelerated in the mid-1950s (eutrophication, pollution, fisheries). The North Sea is now a heavily regulated shelf sea, yet societal goals (good environmental status versus increased uses), demands for benefits and policies diverge increasingly. Likely, the southern North Sea will be re-zoned as riparian countries dedicate increasing sea space for offshore wind energy generation - with uncertain consequences for the system's environmental status. We review available observational and model data (predominantly from the southeastern North Sea region) to identify and describe effects of natural variability, of secular changes, and of human impacts on the North Sea ecosystem, and outline developments in the next decades in response to environmental legislation, and in response to

  15. Adult-Rated Oceanography Part 1: A Project Integrating Ocean Sciences into Adult Basic Education Programs.

    NASA Astrophysics Data System (ADS)

    Cowles, S.; Collier, R.; Torres, M. K.

    2004-12-01

    Busy scientists seek opportunities to implement education and outreach efforts, but often don't know where to start. One easy and tested method is to form collaborations with federally-funded adult education and adult literacy programs. These programs exist in every U.S. state and territory and serve underrepresented populations through such major initiatives as adult basic education, adult secondary education (and GED preparation), and English language acquisition. These students are workers, consumers, voters, parents, grandparents, and members of every community. They have specific needs that are often overlooked in outreach activities. This presentation will describe the steps by which the Oregon Ocean Science and Math Collaborative program was developed. It is based on a partnership between the Oregon Department of Community Colleges and Workforce Development, Oregon State University College of Oceanic and Atmospheric Sciences, Oregon Sea Grant, and the OSU Hatfield Marine Science Center. It includes professional development through instructor institutes; teachers at sea and informal education opportunities; curriculum and web site development. Through the partnership described here, instructors in adult basic education programs participate in a yearlong experience in which they develop, test, and adapt innovative instructional strategies to meet the specific needs of adult learners. This, in turn, leads to new prospects for study in the areas of ocean science and math and introduces non-academic careers in marine science to a new community. Working directly with instructors, we have identified expertise level, instructional environment, instructor background and current teaching strategies used to address science literacy and numeracy goals of the adult learners in the State of Oregon. Preliminary evaluation of our ongoing project in meeting these goals will be discussed. These efforts contribute to national goals of science literacy for all, by providing

  16. Sea Basing Logistiek

    DTIC Science & Technology

    2007-11-01

    iets wat nu voor zware goederen niet mogeljk is met de middelen binnen de Nederlandse krijgsmachit. Nederland heeft bijvoorbeeld (nog) geen specifieke...weer gevechtsklaar zijn. Nederlandse troepen voeren de reconstitute fase in het algemeen uit in Nederland . [Kang&Gue] A special concern in sea based...besluit Nederland zelf in te grijpen. De Nederlandse vredesmissie bevindt zich nabij de kust. maar ver van de grens met buurlanden. De operatie kan niet

  17. Sailing the Cyber Sea

    DTIC Science & Technology

    2012-04-01

    navigating within boundaries and respecting borders. There is another domain that tests such classification and definition. It is similar to the seas in its...further connect us in ways that we have not yet begun to assimilate into our societies and our cultural norms—particularly in the United States. As the...look at the underlying technologies and their transformational effect on our culture , our institutions, and our social fabric. We must also

  18. Altimeter Sea Ice Workshop

    DTIC Science & Technology

    1990-09-01

    Science Fax- 164513 Chalmers University of TechnologyI S-41296 Goteborg, Sweden 5 Altimeter Sea Ice Workshop Presentation Summary Hawkins: Present U.S...into the ground. A large tent slides over the top of the pond for solar shading and inclement weather protection. A mobile gantry, which spans the width...tracks can covering the pond to protect the growing ice from weather when necessary. A walkway mounted on the tracks serves as a mobile base on which the

  19. Wood decay at sea

    NASA Astrophysics Data System (ADS)

    Charles, François; Coston-Guarini, Jennifer; Guarini, Jean-Marc; Fanfard, Sandrine

    2016-08-01

    The oceans and seas receive coarse woody debris since the Devonian, but the kinetics of wood degradation remains one of many unanswered questions about the fate of driftwood in the marine environment. A simple gravimetric experiment was carried out at a monitoring station located at the exit of a steep, forested Mediterranean watershed in the Eastern Pyrenees. The objective was to describe and quantify, with standardized logs (in shape, structure and constitution), natural degradation of wood in the sea. Results show that the mass decrease of wood logs over time can be described by a sigmoidal curve. The primary process of wood decay observed at the monitoring station was due to the arrival and installation of wood-boring species that consumed more than half of the total wood mass in six months. Surprisingly, in a region where there is little remaining wood marine infrastructure, "shipworms", i.e. xylophagous bivalves, are responsible for an important part of this wood decay. This suggests that these communities are maintained probably by a frequent supply of a large quantity of riparian wood entering the marine environment adjacent to the watershed. By exploring this direct link between terrestrial and marine ecosystems, our long term objective is to determine how these supplies of terrestrial organic carbon can sustain wood-based marine communities as it is observed in the Mediterranean Sea.

  20. Dead Sea rhodopsins revisited.

    PubMed

    Bodaker, Idan; Suzuki, Marcelino T; Oren, Aharon; Béjà, Oded

    2012-12-01

    The Dead Sea is a unique hypersaline ecosystem with near toxic magnesium levels (∼2 M), dominance of divalent cations and a slightly acidic pH. Previously, we reported a haloarchaeon related to Halobacterium salinarum to dominate in a microbial bloom that developed in 1992 in the upper water layers of the lake following massive freshwater runoff. Whether this clade also dominated an earlier bloom in 1980-1982 cannot be ascertained as no samples for cultivation-independent analysis were preserved. The presence of the light-driven proton pump bacteriorhodopsin was reported in the 1980-1982 bloom of prokaryotes that had developed in the Dead Sea. To test the hypothesis that bacteriorhodopsin proton pumping may play a major role in determining what type of haloarchaea may dominate in specific bloom conditions, we compared rhodopsin genes recovered from Dead Sea biomass collected in different periods with genes coding for retinal proteins in isolated haloarchaea. Novel bacteriorhodopsin and sensory rhodopsin genes were found in samples collected in 2007 and 2010. The fact that no rhodopsin genes were recovered from samples collected during the 1992 bloom, which was dominated by a single species, suggests that different clades were present in the 1980-1982 and 1992 blooms, and that bacteriorhodopsin proton pumping did not necessarily play a determinative role in the dominance of specific halophiles in the blooms.

  1. Connected-Sea Partons

    NASA Astrophysics Data System (ADS)

    Liu, Keh-Fei; Chang, Wen-Chen; Cheng, Hai-Yang; Peng, Jen-Chieh

    2012-12-01

    According to the path-integral formalism of the hadronic tensor, the nucleon sea contains two distinct components called the connected sea (CS) and the disconnected sea (DS). We discuss how the CS and DS are accessed in the lattice QCD calculation of the moments of the parton distributions. We show that the CS and DS components of u¯(x)+d¯(x) can be extracted by using recent data on the strangeness parton distribution, the CT10 global fit, and the lattice result of the ratio of the strange to u(d) moments in the disconnected insertion. The extracted CS and DS for u¯(x)+d¯(x) have a distinct Bjorken x dependence in qualitative agreement with expectation. The analysis also shows that the momentum fraction of u¯(x)+d¯(x) is about equally divided between the CS and DS at Q2=2.5GeV2. Implications for the future global analysis of parton distributions are presented.

  2. Curonian Spit, Baltic Sea

    NASA Technical Reports Server (NTRS)

    2006-01-01

    On July 25, 2006, the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER), flying on NASA's Terra satellite, captured this image of the Curonian (or Courland)spit, the Curonian Lagoon (also known as the Courland Lagoon) it encloses, and part of the Baltic Sea. Just 3,800 meters (about 12,460 feet) at its widest point, the spit encloses a lagoon of some 1,620 square kilometers (625 square miles). In this image, dark blue indicates deep water, and lighter blue indicates shallow and/or sediment-laden water. Different shades of blue distinguish the deeper Baltic Sea and the shallower Curonian Lagoon. Vegetation appears in varying shades of green, paved surfaces and bare ground appear in shades of beige and gray, and sandy areas appear off-white. Obvious sandy areas appear along the length of the spit. On the Baltic Sea side, a thin off-white band of beach runs the length of the spit; on the Curonian Lagoon side, intermittent beaches carve their way into the narrow strip of land.

  3. Telemetry narrows the search for sea lamprey spawning locations in the St. Clair-Detroit River System

    USGS Publications Warehouse

    Holbrook, Christopher; Jubar, Aaron K.; Barber, Jessica M.; Tallon, Kevin; Hondorp, Darryl W.

    2016-01-01

    Adult sea lamprey (Petromyzon marinus) abundance in Lake Erie has remained above targets set by fishery managers since 2005, possibly due to increased recruitment in the St. Clair-Detroit River System (SCDRS). Sea lamprey recruitment in the SCDRS poses an enormous challenge to sea lamprey control and assessment in Lake Erie because the SCDRS contains no dams to facilitate capture and discharge is at least an order of magnitude larger in the SCDRS than most other sea lamprey-producing tributaries in the Great Lakes. As a first step toward understanding population size, spatial distribution, and spawning habitat of adult sea lampreys in the SCDRS, we used acoustic telemetry to determine where sea lampreys ceased migration (due to spawning, death, or both) among major regions of the SCDRS. All tagged sea lampreys released in the lower Detroit River (N = 27) moved upstream through the Detroit River and entered Lake St. Clair. After entering Lake St. Clair, sea lampreys entered the St. Clair River (N = 22), Thames River (N = 1), or were not detected again (N = 4). Many sea lampreys (10 of 27) were last observed moving downstream (“fallback”) but we were unable to determine if those movements occurred before or after spawning, or while sea lampreys were dead or alive. Regardless of whether estimates of locations where sea lampreys ceased migration were based on the most upstream region occupied or final region occupied, most sea lampreys ceased migration in the St. Clair River or Lake St. Clair. Results suggest that spawning and rearing in the St. Clair River could be an important determinant of sea lamprey recruitment in the SCDRS and may direct future assessment and control activities in that system.

  4. Late Pleistocene Sea Level Stack

    NASA Astrophysics Data System (ADS)

    Spratt, R. M.; Lisiecki, L. E.

    2014-12-01

    Sea level reconstructions have been created using wide variety of proxies and models. The accuracy of individual sea level reconstructions is limited by measurement, noise, local variations in salinity and temperature, and the assumptions particular to each reconstruction. To address these limitations, we have created a sea level stack (average) which increases the signal-to-noise ratio of sea level estimates by combining 5-7 sea level reconstructions over the last 800 kyr. Principal Component analysis (PCA) of seven sea level records from 0-430 kyr ago shows that 82% of the variance in these records is explained by their first principal component (i.e., the stack). Additionally, a stack of just the 5 longer records that extends to 800 kyr closely matches the timing and amplitude of our seven-record mean. We find that the mean sea level estimate for Marine Isotope Stage (MIS) 5e is 0-4 m above modern, and that the standard deviation of individual estimates is 11 m. Mean sea level estimates for MIS 11 are 12-16 m above modern with a standard deviation of 30 m. Due to the large variability between individual reconstructions, our sea level stack may provide more robust sea level estimates than any single technique.

  5. Sea lamprey mark type, marking rate, and parasite-host relationships for lake trout and other species in Lake Ontario

    USGS Publications Warehouse

    Lantry, Brian F.; Adams, Jean V.; Christie, Gavin; Schaner, Teodore; Bowlby, James; Keir, Michael; Lantry, Jana; Sullivan, Paul; Bishop, Daniel; Treska, Ted; Morrison, Bruce

    2015-01-01

    We examined how attack frequency by sea lampreys on fishes in Lake Ontario varied in response to sea lamprey abundance and preferred host abundance (lake trout > 433 mm). For this analysis we used two gill net assessment surveys, one angler creel survey, three salmonid spawning run datasets, one adult sea lamprey assessment, and a bottom trawl assessment of dead lake trout. The frequency of fresh sea lamprey marks observed on lake trout from assessment surveys was strongly related to the frequency of sea lamprey attacks observed on salmon and trout from the creel survey and spawning migrations. Attack frequencies on all salmonids examined were related to the ratio between the abundances of adult sea lampreys and lake trout. Reanalysis of the susceptibility to sea lamprey attack for lake trout strains stocked into Lake Ontario reaffirmed that Lake Superior strain lake trout were among the most and Seneca Lake strain among the least susceptible and that Lewis Lake strain lake trout were even more susceptible than the Superior strain. Seasonal attack frequencies indicated that as the number of observed sea lamprey attacks decreased during June–September, the ratio of healing to fresh marks also decreased. Simulation of the ratios of healing to fresh marks indicated that increased lethality of attacks by growing sea lampreys contributed to the decline in the ratios and supported laboratory studies about wound healing duration.

  6. Arctic landfast sea ice

    NASA Astrophysics Data System (ADS)

    Konig, Christof S.

    Landfast ice is sea ice which forms and remains fixed along a coast, where it is attached either to the shore, or held between shoals or grounded icebergs. Landfast ice fundamentally modifies the momentum exchange between atmosphere and ocean, as compared to pack ice. It thus affects the heat and freshwater exchange between air and ocean and impacts on the location of ocean upwelling and downwelling zones. Further, the landfast ice edge is essential for numerous Arctic mammals and Inupiat who depend on them for their subsistence. The current generation of sea ice models is not capable of reproducing certain aspects of landfast ice formation, maintenance, and disintegration even when the spatial resolution would be sufficient to resolve such features. In my work I develop a new ice model that permits the existence of landfast sea ice even in the presence of offshore winds, as is observed in mature. Based on viscous-plastic as well as elastic-viscous-plastic ice dynamics I add tensile strength to the ice rheology and re-derive the equations as well as numerical methods to solve them. Through numerical experiments on simplified domains, the effects of those changes are demonstrated. It is found that the modifications enable landfast ice modeling, as desired. The elastic-viscous-plastic rheology leads to initial velocity fluctuations within the landfast ice that weaken the ice sheet and break it up much faster than theoretically predicted. Solving the viscous-plastic rheology using an implicit numerical method avoids those waves and comes much closer to theoretical predictions. Improvements in landfast ice modeling can only verified in comparison to observed data. I have extracted landfast sea ice data of several decades from several sources to create a landfast sea ice climatology that can be used for that purpose. Statistical analysis of the data shows several factors that significantly influence landfast ice distribution: distance from the coastline, ocean depth, as

  7. Advanced Concepts for Sea Control,

    DTIC Science & Technology

    1977-11-01

    technology sea control missions, 1,000 tonnes to advances occur, and the threat needs 25,000 tonnes would be representative change, a proper balance can be...sea loiter aircraft, conventional subcavitating fully-sub- utilizing the stopped rotor concept; merged foils, thus providing a very a small sea...augmentation engines have been platform characteristics at conventional moved from their overhung location to a displacement ship speeds but at a re- . place

  8. The USGS Salton Sea Science Office

    USGS Publications Warehouse

    Case, Harvey Lee; Barnum, Douglas A.

    2007-01-01

    The U.S. Geological Survey's (USGS) Salton Sea Science Office (SSSO) provides scientific information and evaluations to decisionmakers who are engaged in restoration planning and actions associated with the Salton Sea. The primary focus is the natural resources of the Salton Sea, including the sea?s ability to sustain biological resources and associated social and economic values.

  9. Sea Otter, River Otter. The Wonder Series.

    ERIC Educational Resources Information Center

    Robinson, Sandra Chisholm

    This curriculum guide is all about otters and provides information on both sea and river otters. Included are activities related to the diet of sea otters, the adaptations sea otters have made to live in the sea, their tool-using abilities, where they live and how to spot them, comparative anatomy of sea and river otters, and otter movement. The…

  10. Regime shifts in North Sea and Baltic Sea: A comparison

    NASA Astrophysics Data System (ADS)

    Dippner, Joachim W.; Möller, Caroline; Hänninen, Jari

    2012-12-01

    The ICES subdivisions in the North Sea (SD IIIa, SD IVa, and SD IVb) and the subdivisions in the Baltic Sea (SD 29, SD 27/28-2, and SD 25/26) are selected to compare the response in long term monitoring data (1970-2000) with respect to climate regime shifts. A modified AMOEBA model is applied to the data sets to identify the status and development of the North Sea and Baltic Sea system during two recent regime shifts. Biological regime shifts can be identified 1989/1990 in SD IIIa in the North Sea and in SD 25/26 in the Baltic Sea. A synchronous appearance of regime shifts could only be identified in the central and southern Baltic Sea for both regime shifts 1975/76 and 1989/90 where the AMOEBA model indicated a high similarity in ecosystem response. A clear difference was identified in the response of the North Sea and the Baltic Sea. Inter-annual and inter-decadal variability as well as regime shifts are driven in the Baltic Sea by direct atmospheric forcing only. In contrast, the changes in the North Sea are influenced by both the direct atmospheric forcing and the indirect forcing from the changes in North Atlantic. The fact that regime shifts as well as their synchronous appearance can be identified with the AMOEBA model might be of major interest for the management of sustainable use of ecosystem goods and services, the development of ecosystem approach to management and the implementation of the Marine Strategy Framework Directive (MSFD) of the European Union (EU).

  11. Sea Salt Source Function over the Baltic Sea

    NASA Astrophysics Data System (ADS)

    Petelski, Tomasz; Makuch, Przemyslaw; Markuszewski, Piotr; Jankowski, Andrzej; Zieliński, Tymon

    2013-04-01

    Studies of production and transport of aerosol over the sea are very important for many areas of knowledge. Marine aerosol emitted from the sea surface helps to clean the boundary layer from other aerosol particles. The emitted droplets do not dry out in the highly humid surface layer air and because of their sizes most of them are deposited quickly at the sea surface. Therefore, marine aerosol has many features of rain i.e. the deposition in the marine boundary layer in high wind events is controlled not only by the "dry" processes but also by the "wet" scavenging. While many cruises conducted on board S/Y Oceania, we collected many data which were used to calculate sea salt source function over the Baltic Sea. Our cruises held between 2009 and 2012. Measurements were carried out using gradient method. For this method we used Laser Particle Counter (PMS model CSASP-100_HV) placed on one oft the mast of S/Y Oceania. Measurements were performed on five different levels around sea level: 8, 11, 14, 17 and 20 meters. Based on the averaged vertical concentration, profiles were calculated, using Monin-Obuchow theory, vertical sea spray fluxes in the near water layer. Based on fluxes calculated from vertical concentration profiles was calculated sea salt source function over the Baltic Sea. This function gives emission for different particle size, depending on environmental parameters. Emission of sea spray depends of the size of energy lost by the wind waves in process of collapse. Acknowledgements: The support for this study was provided by the project Satellite Monitoring of the Baltic Sea Environment - SatBałtyk founded by European Union through European Regional Development Fund contract No. POIG 01.01.02-22-011/09.

  12. Sea-ice habitat preference of the Pacific walrus (Odobenus rosmarus divergens) in the Bering Sea: A multiscaled approach

    NASA Astrophysics Data System (ADS)

    Sacco, Alexander Edward

    The goal of this thesis is to define specific parameters of mesoscale sea-ice seascapes for which walruses show preference during important periods of their natural history. This research thesis incorporates sea-ice geophysics, marine-mammal ecology, remote sensing, computer vision techniques, and traditional ecological knowledge of indigenous subsistence hunters in order to quantitatively study walrus preference of sea ice during the spring migration in the Bering Sea. Using an approach that applies seascape ecology, or landscape ecology to the marine environment, our goal is to define specific parameters of ice patch descriptors, or mesoscale seascapes in order to evaluate and describe potential walrus preference for such ice and the ecological services it provides during an important period of their life-cycle. The importance of specific sea-ice properties to walrus occupation motivates an investigation into how walruses use sea ice at multiple spatial scales when previous research suggests that walruses do not show preference for particular floes. Analysis of aerial imagery, using image processing techniques and digital geomorphometric measurements (floe size, shape, and arrangement), demonstrated that while a particular floe may not be preferred, at larger scales a collection of floes, specifically an ice patch (< 4 km2), was preferred. This shows that walruses occupy ice patches with distinct ice features such as floe convexity, spatial density, and young ice and open water concentration. Ice patches that are occupied by adult and juvenile walruses show a small number of characteristics that vary from those ice patches that were visually unoccupied. Using synthetic aperture radar imagery, we analyzed co-located walrus observations and statistical texture analysis of radar imagery to quantify seascape preferences of walruses during the spring migration. At a coarse resolution of 100 -- 9,000 km2, seascape analysis shows that, for the years 2006 -- 2008

  13. Albatross Long-Distance Navigation: Comparing Adults And Juveniles

    NASA Astrophysics Data System (ADS)

    Åkesson, Susanne; Weimerskirch, Henri

    2005-09-01

    Albatrosses are known for their extreme navigation performance enabling them to locate isolated breeding islands after long-distance migrations across open seas. Little is known about the migration of young albatrosses and how they reach the adults' navigation and foraging skills during the period of immaturity lasting several years and spent permanently flying across the open ocean. We tracked by satellite telemetry the dispersal and migration of 13 juvenile wandering albatrosses from the Crozet Islands during their first year at sea. The young albatrosses covered an average distance of 184,000 km during the first year, restricting their dispersal movement to the unproductive and low wind subtropical Indian Ocean and Tasman Sea. The juveniles initiated the migration by an innate phase of rapid dispersal encoded as a fixed flight direction assisted by southerly winds towards north and northeast. Thereafter each individual restricted its movement to a particular zone of the ocean that will possibly be used until they start breeding 7 10 years later and return in contact with breeding adults. This dispersal in young birds corresponds well with movements observed for adult non-breeding wandering albatrosses. The results show clearly an inherited ability to navigate back to already visited areas in young wandering albatrosses. The juvenile dispersal behaviour and migration at sea suggest a genetically based migration program, encoding navigation to a destination area used throughout the life.

  14. Study of the possible role of pollution in the prevalence of sea nettles in the Chesapeake Bay and the development of a census taking method

    NASA Technical Reports Server (NTRS)

    1971-01-01

    A study of the effect of pollutants on the sea nettle population of Chesapeake Bay was conducted. The effects of pollutants on the polyp stage of the nettle were stressed. Methods of detecting adult sea nettles by remote sensing are discussed. The effects of phosphate, nitrate, ammonium, and combinations of these pollutants were investigated.

  15. Clueless? Adult Mysteries with Young Adult Appeal.

    ERIC Educational Resources Information Center

    Charles, John; Morrison, Joanna

    1997-01-01

    Presents a list of adult mystery titles for young adult readers. Includes first titles in a series (for reading in order); new and lesser-known mystery authors' works are the focus. Annotations include plot summary. The rest of each annotation is for professional use (includes date and name of award bestowed). (AEF)

  16. Young Adult Literature for Young Adult Males.

    ERIC Educational Resources Information Center

    Gill, Sam D.

    1999-01-01

    Argues that young adult literature can play a significant role in the emotional and mental health of an adolescent as well as help young males become more literate. Offers a 19-item annotated list of young adult novels with male protagonists, sorted by themes: nature and adventure stories, sports stories, genre stories, historical stories, and…

  17. Factors Influencing Capture of Invasive Sea Lamprey in Traps Baited With a Synthesized Sex Pheromone Component.

    PubMed

    Johnson, Nicholas S; Siefkes, Michael J; Wagner, C Michael; Bravener, Gale; Steeves, Todd; Twohey, Michael; Li, Weiming

    2015-10-01

    The sea lamprey, Petromyzon marinus, is emerging as a model organism for understanding how pheromones can be used for manipulating vertebrate behavior in an integrated pest management program. In a previous study, a synthetic sex pheromone component 7α,12α, 24-trihydroxy-5α-cholan-3-one 24-sulfate (3kPZS) was applied to sea lamprey traps in eight streams at a final in-stream concentration of 10(-12) M. Application of 3kPZS increased sea lamprey catch, but where and when 3kPZS had the greatest impact was not determined. Here, by applying 3kPZS to additional streams, we determined that overall increases in yearly exploitation rate (proportion of sea lampreys that were marked, released, and subsequently recaptured) were highest (20-40%) in wide streams (~40 m) with low adult sea lamprey abundance (<1000). Wide streams with low adult abundance may be representative of low-attraction systems for adult sea lamprey and, in the absence of other attractants (larval odor, sex pheromone), sea lamprey may have been more responsive to a partial sex pheromone blend emitted from traps. Furthermore, we found that the largest and most consistent responses to 3kPZS were during nights early in the trapping season, when water temperatures were increasing. This may have occurred because, during periods of increasing water temperatures, sea lamprey become more active and males at large may not have begun to release sex pheromone. In general, our results are consistent with those for pheromones of invertebrates, which are most effective when pest density is low and when pheromone competition is low.

  18. Factors influencing capture of invasive sea lamprey in traps baited with a synthesized sex pheromone component

    USGS Publications Warehouse

    Johnson, Nicholas; Siefkes, Michael J.; Wagner, C. Michael; Bravener, Gale; Steeves, Todd; Twohey, Michael; Li, Weiming

    2015-01-01

    The sea lamprey, Petromyzon marinus, is emerging as a model organism for understanding how pheromones can be used for manipulating vertebrate behavior in an integrated pest management program. In a previous study, a synthetic sex pheromone component 7α,12α, 24-trihydroxy-5α-cholan-3-one 24-sulfate (3kPZS) was applied to sea lamprey traps in eight streams at a final in-stream concentration of 10−12 M. Application of 3kPZS increased sea lamprey catch, but where and when 3kPZS had the greatest impact was not determined. Here, by applying 3kPZS to additional streams, we determined that overall increases in yearly exploitation rate (proportion of sea lampreys that were marked, released, and subsequently recaptured) were highest (20–40 %) in wide streams (~40 m) with low adult sea lamprey abundance (<1000). Wide streams with low adult abundance may be representative of low-attraction systems for adult sea lamprey and, in the absence of other attractants (larval odor, sex pheromone), sea lamprey may have been more responsive to a partial sex pheromone blend emitted from traps. Furthermore, we found that the largest and most consistent responses to 3kPZS were during nights early in the trapping season, when water temperatures were increasing. This may have occurred because, during periods of increasing water temperatures, sea lamprey become more active and males at large may not have begun to release sex pheromone. In general, our results are consistent with those for pheromones of invertebrates, which are most effective when pest density is low and when pheromone competition is low.

  19. Sea Urchin Morphogenesis.

    PubMed

    McClay, David R

    2016-01-01

    In the sea urchin morphogenesis follows extensive molecular specification. The specification controls the many morphogenetic events and these, in turn, precede patterning steps that establish the larval body plan. To understand how the embryo is built it was necessary to understand those series of molecular steps. Here an example of the historical sequence of those discoveries is presented as it unfolded over the last 50 years, the years during which major progress in understanding development of many animals and plants was documented by CTDB. In sea urchin development a rich series of experimental studies first established many of the phenomenological components of skeletal morphogenesis and patterning without knowledge of the molecular components. The many discoveries of transcription factors, signals, and structural proteins that contribute to the shape of the endoskeleton of the sea urchin larva then followed as molecular tools became available. A number of transcription factors and signals were discovered that were necessary for specification, morphogenesis, and patterning. Perturbation of the transcription factors and signals provided the means for assembling models of the gene regulatory networks used for specification and controlled the subsequent morphogenetic events. The earlier experimental information informed perturbation experiments that asked how patterning worked. As a consequence it was learned that ectoderm provides a series of patterning signals to the skeletogenic cells and as a consequence the skeletogenic cells secrete a highly patterned skeleton based on their ability to genotypically decode the localized reception of several signals. We still do not understand the complexity of the signals received by the skeletogenic cells, nor do we understand in detail how the genotypic information shapes the secreted skeletal biomineral, but the current knowledge at least outlines the sequence of events and provides a useful template for future

  20. Dental pathology of the California sea lion (Zalophus californianus).

    PubMed

    Sinai, N L; Dadaian, R H; Kass, P H; Verstraete, F J M

    2014-07-01

    Skulls from 1,085 California sea lions (Zalophus californianus) were examined macroscopically according to defined criteria. The museum specimens, 61.8% male and 37.3% female, were acquired from strandings and varied in age from juvenile to adult. The majority of teeth were available for examination (95.7%); 3.8% of teeth were artefactually absent, 0.4% deemed absent due to acquired tooth loss and 0.1% were congenitally absent. Acquired tooth loss was associated significantly with sex (P = 0.004) with males having more tooth loss than females and total ante-mortem tooth loss was associated significantly with age (P <0.0001) with adults having more tooth loss than young adults and juveniles. Eleven teeth were malformed and 81 teeth were observed to have two roots. Supernumerary teeth (usually maxillary molar teeth) were associated with 1.3% of teeth, some specimens demonstrating up to four supernumerary teeth. Thirteen persistent deciduous teeth were identified. A total of 713 specimens showed attrition or abrasion, with 42.4% of teeth affected. A significant association was detected between sex and incidence of abrasion and age and the incidence of abrasion (P <0.0001 for both associations). Males showed more abrasion than females and adults showed more abrasion than young adults or juveniles. Two hundred and sixteen fractured teeth were observed, with root fractures being most prevalent. Fractures were associated significantly with sex and with age (P <0.0001 for each association). Males had more fractures than females and adults had more fractures than young adults and juveniles. Bony changes consistent with periodontitis were found, affecting 19.4% of teeth. Males were shown to have more periodontitis than females and adults were shown to have more periodontitis than young adults and juveniles. Sixty-three periapical lesions were noted.