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Sample records for adult steelhead oncorhynchus

  1. Transportation of chinook salmon, Oncorhynchus tshawytscha, and steelhead, Salmo gairdneri, smolts in the Columbia River and effects on adult returns

    SciTech Connect

    Ebel, W.J.

    1980-04-01

    Chinook salmon, Oncorhynchus tshawytscha, and steelhead, Salmo gairdneri, were captured at Little Goose Dam in the Snake River during their seaward migration and transported 400 km downstream to the lower Columbia River below Bonneville Dam. Their survival was increased from 1.1 to 15 times as compared with control fish which passed by seven mainstem low-level dams and reservoirs. Variations in survival were mainly dependent on species and environmental conditions in the river during the period fish were transported. The homing ability of the adult fish was not significantly diminished; less than 0.2% of strays occurred among adult returns from groups transported. Transportation did not affect ocean age or size of returning adult steelhead, but ocean age of returning adult chinook salmon may have been affected. Steelhead returned to Little Goose Dam at a substantially higher rate (1.4 to 2.7%) than chinook salmon (0.1 to 0.8%) from groups transported. The timing of adult returns of both species to Little Goose Dam was not related to the time of capture and downstream release of smolts.

  2. Migration depths of adult steelhead Oncorhynchus mykiss in relation to dissolved gas supersaturation in a regulated river system

    SciTech Connect

    Johnson, Eric L.; Clabough, Tami S.; Caudill, Christopher C.; keefer, matthew L.; Peery, Christopher A.; Richmond, Marshall C.

    2010-04-01

    Adult steelhead tagged with archival transmitters primarily migrated through a large river corridor at depths > 2 m, interspersed with frequent but short (< 5 min) periods closer to the surface. The recorded swimming depths and behaviours probably provided adequate hydrostatic compensation for the encountered supersaturated dissolved gas conditions and probably limited development of gas bubble disease (GBD). Results parallel those from a concurrent adult Chinook salmon study, except steelhead experienced greater seasonal variability and were more likely to have depth-uncompensated supersaturation exposure in some dam tailraces, perhaps explaining the higher incidence of GBD in this species.

  3. Angler harvest, hatchery return, and tributary stray rates of recycled adult summer steelhead Oncorhynchus mykiss in the Cowlitz River, Washington

    USGS Publications Warehouse

    Kock, Tobias J.; Perry, Russell W.; Gleizes, Chris; Dammers, Wolf; Liedtke, Theresa L.

    2016-01-01

    Hatchery ‘recycling’ programs have been used to increase angling opportunities by re-releasing fish into a river after they returned to a hatchery or fish trap. Recycling is intended to increase opportunities for fishermen, but this strategy could affect wild fish populations if some recycled fish remain in the river and interact with wild fish populations. To quantify hatchery return and angler harvest rates of recycled steelhead, we conducted a 2-year study on the Cowlitz River, Washington. A total of 1051 steelhead were recycled, including 218 fish that were radio-tagged. Fates of recycled steelhead were similar between years: 48.4% returned to the hatchery, 19.2% were reported captured by anglers, and 32.4% remained in the river. A multistate model quantified the effects of covariates on hatchery return and angler harvest rates, which were positively affected by river discharge and negatively affected by time since release. However, hatchery return rates increased and angler harvest rates decreased during periods of increasing discharge. A total of 21.1% (46 fish) of the radio-tagged steelhead failed to return to the hatchery or be reported by anglers, but nearly half of those fish (20 fish) appeared to be harvested and not reported. The remaining tagged fish (11.9% of the radio-tagged population) were monitored into the spawning period, but only five fish (2.3% of the radio-tagged population) entered tributaries where wild steelhead spawning occurs. Future research focused on straying behaviour, and spawning success of recycled steelhead may further advance the understanding of the effects of recycling as a management strategy.

  4. Fluvial rainbow trout contribute to the colonization of steelhead (Oncorhynchus mykiss) in a small stream

    USGS Publications Warehouse

    Weigel, Dana E.; Connolly, Patrick J.; Powell, Madison S.

    2013-01-01

    Life history polymorphisms provide ecological and genetic diversity important to the long term persistence of species responding to stochastic environments. Oncorhynchus mykiss have complex and overlapping life history strategies that are also sympatric with hatchery populations. Passive integrated transponder (PIT) tags and parentage analysis were used to identify the life history, origin (hatchery or wild) and reproductive success of migratory rainbow/steelhead for two brood years after barriers were removed from a small stream. The fluvial rainbow trout provided a source of wild genotypes to the colonizing population boosting the number of successful spawners. Significantly more parr offspring were produced by anadromous parents than expected in brood year 2005, whereas significantly more parr offspring were produced by fluvial parents than expected in brood year 2006. Although hatchery steelhead were prevalent in the Methow Basin, they produced only 2 parr and no returning adults in Beaver Creek. On average, individual wild steelhead produced more parr offspring than the fluvial or hatchery groups. Yet, the offspring that returned as adult steelhead were from parents that produced few parr offspring, indicating that high production of parr offspring may not be related to greater returns of adult offspring. These data in combination with other studies of sympatric life histories of O. mykiss indicate that fluvial rainbow trout are important to the conservation and recovery of steelhead and should be included in the management and recovery efforts.

  5. Growth of age-0 steelhead (Oncorhynchus mykiss) and brook trout (Salvelinus fontinalis) in the Pine River watershed, Alcona County, Michigan

    SciTech Connect

    Bellgraph, Brian J.; Thompson, Bradley E.; Hayes, Daniel B.; Riley, Timothy S.

    2006-12-01

    We sampled ten sites within the Pine River watershed, Alcona County, Michigan. In 2001, age-0 steelhead (Oncorhynchus mykiss) were collected to determine growth rates. In 2002, emergence dates of steelhead were determined by observational studies and age-0 steelhead and brook trout (Salvelinus fontinalis) were collected to determine growth rates. Steelhead emergence occurred from late June to mid-July 2002. Growth rates of both species varied among branches within the watershed (P<0.05). Steelhead growth varied from 0.24 to 0.42 mm/day and brook trout growth varied from 0.22 to 0.37 mm/day.

  6. Sluiceway Operations for Adult Steelhead Downstream Passage at The Dalles Dam, Columbia River, USA

    SciTech Connect

    Khan, Fenton; Royer, Ida M.; Johnson, Gary E.; Tackley, Sean C.

    2013-10-01

    This study evaluated adult steelhead (Oncorhynchus mykiss; fallbacks and kelts) downstream passage at The Dalles Dam in the Columbia River, USA, during the late fall, winter, and early spring months between 2008 and 2011. The purpose of the study was to determine the efficacy of operating the dam’s ice-and-trash sluiceway during non-spill months to provide a relatively safe, non-turbine, surface outlet for overwintering steelhead fallbacks and downstream migrating steelhead kelts. We applied the fixed-location hydroacoustic technique to estimate fish passage rates at the sluiceway and turbines of the dam. The spillway was closed during our sampling periods, which generally occurred in late fall, winter, and early spring. The sluiceway was highly used by adult steelhead (91–99% of total fish sampled passing the dam) during all sampling periods. Turbine passage was low when the sluiceway was not operated. This implies that lack of a sluiceway route did not result in increased turbine passage. However, when the sluiceway was open, adult steelhead used it to pass through the dam. The sluiceway may be operated during late fall, winter, and early spring to provide an optimal, non-turbine route for adult steelhead (fallbacks and kelts) downstream passage at The Dalles Dam.

  7. Stress of formalin treatment in juvenile spring chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Salmo gairdneri)

    USGS Publications Warehouse

    Wedemeyer, Gary; Yasutake, W.T.

    1973-01-01

    The physiological stress of 200 ppm formalin treatments at 10 C is more severe in the juvenile steelhead trout (Salmo gairdneri) than in the spring chinook salmon (Oncorhynchus tshawytscha). In the steelhead, a marked hypochloremia follows a 1-hr treatment and recovery requires about 24 hr. During longer treatments, hypercholesterolemia together with reduced regulatory precision, hypercortisolemia, alkaline reserve depletion, and hypocapnia unaccompanied by a fall in blood pH occur — suggestive of compensated respiratory alkalosis. In the spring chinook, hypochloremia and reduced plasma cholesterol regulatory precision are the significant treatment side effects but recovery requires only a few hours.Formalin treatments also cause epithelial separation, hypertrophy, and necrosis in the gills of both fishes but again, consistent with the physiological dysfunctions, these are more severe in the steelhead.

  8. Some physiological aspects of sublethal heat stress in the juvenile steelhead trout (Salmo gairdneri) and coho salmon (Oncorhynchus kisutch)

    USGS Publications Warehouse

    Wedemeyer, Gary

    1973-01-01

    A rapid (3 min) but sublethal temperature increase from 10 to 20 imposed a greater stress on juvenile coho salmon (Oncorhynchus kisutch) than on juvenile steelhead trout (Salmo gairdneri). Both species suffered hyperglycemia, hypocholesterolemia, increased blood hemoglobin, and decreased blood sugar regulatory precision, but the steelhead recovered more quickly. Acid–base equilibrium was essentially unaffected, and only the coho suffered any significant interrenal vitamin C depletion. Vitamin C normalization required about 24 hr.

  9. Experimental hexamitiasis in juvenile coho salmon (Oncorhynchus kisutch) and steelhead trout (Salmo gairdner)

    USGS Publications Warehouse

    1965-01-01

    An exogenous strain of cultured Hexamita salmonis (Moore) was employed to induce trophic hexamitiasis in otherwise disease-free juveniles of coho salmon (Oncorhynchus kisutch) and steelhead trout (Salmo gairdneri). Mortality and growth were the parameters used to detect the effects of hexamitiasis on the two species. Two levels of each of the three experimental factors under study, Hexamita infection, species of fish, and density of fish, were arranged in a three-way factorial design. Replicate lots involved a total of 1,440 fish held under controlled laboratory conditions.Comparisons of growth and mortality indicate that infection with H. salmonis over a period of 8 weeks is innocuous to coho salmon. Steelhead trout suffered a low, but statistically significant mortality which subsided after the sixth week; growth rate was not affected.

  10. Over the falls? Rapid evolution of ecotypic differentiation in steelhead/rainbow trout (Oncorhynchus mykiss).

    PubMed

    Pearse, Devon E; Hayes, Sean A; Bond, Morgan H; Hanson, Chad V; Anderson, Eric C; Macfarlane, R Bruce; Garza, John Carlos

    2009-01-01

    Adaptation to novel habitats and phenotypic plasticity can be counteracting forces in evolution, but both are key characteristics of the life history of steelhead/rainbow trout (Oncorhynchus mykiss). Anadromous steelhead reproduce in freshwater river systems and small coastal streams but grow and mature in the ocean. Resident rainbow trout, either sympatric with steelhead or isolated above barrier dams or waterfalls, represent an alternative life-history form that lives entirely in freshwater. We analyzed population genetic data from 1486 anadromous and resident O. mykiss from a small stream in coastal California with multiple barrier waterfalls. Based on data from 18 highly variable microsatellite loci (He = 0.68), we conclude that the resident population above one barrier, Big Creek Falls, is the result of a recent anthropogenic introduction from the anadromous population of O. mykiss below the falls. Furthermore, fish from this above-barrier population occasionally descend over the falls and have established a genetically differentiated below-barrier subpopulation at the base of the falls, which appears to remain reproductively isolated from their now-sympatric anadromous ancestors. These results support a hypothesis of rapid evolution of a purely resident life history in the above-barrier population in response to strong selection against downstream movement. PMID:19561050

  11. Electronic tags and genetics explore variation in migrating steelhead kelts (oncorhynchus mykiss), Ninilchik river, Alaska

    USGS Publications Warehouse

    Nielsen, J.L.; Turner, S.M.; Zimmerman, C.E.

    2011-01-01

    Acoustic and archival tags examined freshwater and marine migrations of postspawn steelhead kelts (Oncorhynchus mykiss) in the Ninilchik River, Alaska, USA. Postspawn steelhead were captured at a weir in 2002-2005. Scale analysis indicated multiple migratory life histories and spawning behaviors. Acoustic tags were implanted in 99 kelts (2002-2003), and an array of acoustic receivers calculated the average speed of outmigration, timing of saltwater entry, and duration of residency in the vicinity of the river mouth. Ocean migration data were recovered from two archival tags implanted in kelts in 2004 (one male and one female). Archival tags documented seasonal differences in maximum depth and behavior with both fish spending 97% of time at sea <6 m depth (day and night). All study fish were double tagged with passive integrated transponder (PIT) tags implanted in the body cavity. Less than 4% of PIT tags were retained in postspawn steelhead. Molecular genetics demonstrated no significant differences in genetic population structure across years or among spawning life history types, suggesting a genetically panmictic population with highly diverse life history characteristics in the Ninilchik River.

  12. Kelt Reconditioning: A Research Project to Enhance Iteroparity in Columbia Basin Steelhead (Oncorhynchus mykiss), 2001 Annual Report.

    SciTech Connect

    Hatch, Douglas R.; Anders, Paul J., Evans, Allen F.

    2002-12-01

    Repeat spawning is a life history strategy that is expressed by some species from the family Salmonidae. Rates of repeat spawning for post-development Columbia River steelhead (Oncorhynchus mykiss) populations range from 1.6 to 17%. It is expected that currently observed iteroparity rates for wild steelhead in the Basin are artificially and in some cases severely depressed due to development and operation of the hydropower system and various additional anthropogenic factors. Increasing the natural expression of historical repeat spawning rates using fish culturing means could be a viable technique to assist the recovery of depressed steelhead populations. Reconditioning is the process of culturing post-spawned fish (kelts) in a captive environment until they are able to reinitiate feeding, growth, and again develop mature gonads. Kelt reconditioning techniques were initially developed for Atlantic salmon (Salmo salar) and sea-trout (S. trutta). The recent Endangered Species Act listing of many Columbia Basin steelhead populations has prompted interest in developing reconditioning methods for wild steelhead populations within the Basin. To address recovery, we captured wild emigrating steelhead kelts from the Yakima River and tested reconditioning and the effects of several diet formulations on its success at Prosser Hatchery on the Yakama Reservation. Steelhead kelts from the Yakima River were collected at the Chandler Juvenile Evaluation Facility (CJEF, located at Yakima River kilometer 48) from 12 March to 5 July 2001. Kelts were reconditioned in circular tanks and fed a mixed diet of starter paste, adult sized trout pellets, and freeze-dried krill. Formalin was used to control outbreaks of fungus and we tested the use of Ivermectin{trademark}to control internal parasites (e.g., Salmincola spp.). Surviving specimens were released for natural spawning in two groups on 15 November 2001 and 18 January 2002. Overall success of the reconditioning process was based on

  13. Environmental enrichment in steelhead (Oncorhynchus mykiss) hatcheries: Field evaluation of aggression, foraging, and territoriality in natural and hatchery fry

    USGS Publications Warehouse

    Tatara, C.P.; Riley, S.C.; Scheurer, J.A.

    2008-01-01

    Reforms for salmonid hatcheries include production of hatchery fish with behavioral characteristics similar to wild conspecifics. Enrichment of the hatchery environment has been proposed to achieve this goal. Field experiments of steelhead (i.e., sea-run rainbow trout, Oncorhynchus mykiss) fry from a common stock reared under natural (i.e., stream), enriched hatchery, and conventional hatchery conditions indicated no significant differences in the rates of foraging or aggression between rearing treatments. However, the rates of foraging and aggression of natural fry were significantly affected by the type of hatchery fry stocked with them. Natural steelhead fry fed at lower rates and exhibited higher rates of aggression when stocked with steelhead fry raised in enriched hatchery environments. Territory sizes of steelhead fry ranged from 0.015 to 0.801 m2; were significantly, positively related to body length; and were not significantly different between rearing treatments. We conclude that hatchery steelhead fry released into streams establish territories that are proportional to their body length and similar in size to territories of natural steelhead fry. Our results indicate that both conventional and enriched hatchery environments produce natural social behaviors in steelhead released as fry and that fry from enriched hatchery environments may alter the foraging and aggressive behavior of natural, resident steelhead fry. ?? 2008 NRC.

  14. Genetic variation underlying resistance to infectious hematopoietic necrosis virus in a steelhead trout (Oncorhynchus mykiss) population

    USGS Publications Warehouse

    Brieuc, Marine S. O.; Purcell, Maureen K.; Palmer, Alexander D.; Naish, Kerry A.

    2015-01-01

    Understanding the mechanisms of host resistance to pathogens will allow insights into the response of wild populations to the emergence of new pathogens. Infectious hematopoietic necrosis virus (IHNV) is endemic to the Pacific Northwest and infectious to Pacific salmon and trout (Oncorhynchus spp.). Emergence of the M genogroup of IHNV in steelhead trout O. mykiss in the coastal streams of Washington State, between 2007 and 2011, was geographically heterogeneous. Differences in host resistance due to genetic change were hypothesized to be a factor influencing the IHNV emergence patterns. For example, juvenile steelhead trout losses at the Quinault National Fish Hatchery (QNFH) were much lower than those at a nearby facility that cultures a stock originally derived from the same source population. Using a classical quantitative genetic approach, we determined the potential for the QNFH steelhead trout population to respond to selection caused by the pathogen, by estimating the heritability for 2 traits indicative of IHNV resistance, mortality (h2 = 0.377 (0.226 - 0.550)) and days to death (h2 = 0.093 (0.018 - 0.203)). These results confirm that there is a genetic basis for resistance and that this population has the potential to adapt to IHNV. Additionally, genetic correlation between days to death and fish length suggests a correlated response in these traits to selection. Reduction of genetic variation, as well as the presence or absence of resistant alleles, could affect the ability of populations to adapt to the pathogen. Identification of the genetic basis for IHNV resistance could allow the assessment of the susceptibility of other steelhead populations.

  15. Sediment Dynamics and Southern Steelhead Habitat (Oncorhynchus mykiss) in the Matilija Creek Watershed, Southern California

    NASA Astrophysics Data System (ADS)

    Minear, J. T.; Kondolf, G. M.

    2003-12-01

    Matilija Creek, one of two principal forks of the Ventura River, drains 142 km2 in the Transverse Ranges of southern California. Thanks to rapid tectonic uplift and weak clastic rocks, sediment yields exceed 1200 m3/km2 annually. Matilija Dam was built in 1947 with an initial capacity of 8 million m3 and is now nearly full of sediment. The dam is structurally unsafe, blocks anadromous fish migration, and is being considered for removal. The Ventura River has one of the southernmost runs of steelhead trout (Oncorhynchus mykiss), with an average of approximately 2,500 annually migrating up Matilija Creek before the dam was built. The high sediment yields and highly variable flow regime have raised questions about the interactions among high flows, sediment transfer from lower order tributaries to the third order channels used by the fish, and fish life history. Previous studies in Southern California have documented sediment yields (especially following debris flows and fires, and mostly in the San Gabriel Mountains), but the interaction of geomorphic processes and aquatic habitat in this highly episodic environment is not well understood. We used a combination of mapping and survey techniques, sediment traps, grain size analysis, lithologic analysis and scour rods to study intra-annual geomorphic processes and sediment dynamics affecting Southern Steelhead habitat in the Matilija Creek area in 16 study pools over the 2002 and 2003 flow seasons (dry and "normal", respectively) and found little sediment was deposited or scoured from pools. However, other processes not previously recognized significantly affected the steelhead habitat in the study pools including tufa cementation (carbonate deposition) and alder root growth in spawning gravels, as well as seasonal desiccation of some reaches. Removal of Matilija Dam will reopen suitable habitat to steelhead trout, but managers should recognize that habitat quality is likely to vary considerably from year

  16. Comparative diets of subyearling Chinook salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss) in the Salmon River, New York

    USGS Publications Warehouse

    Johnson, J.H.

    2007-01-01

    Chinook salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss) have established naturalized populations throughout the Great Lakes. Young-of-year of these species occur sympatrically for about one month in Lake Ontario tributaries. This study examined the diets of subyearling Chinook salmon and steelhead relative to available food in the Salmon River, New York. Terrestrial invertebrates and trichopterans were the major prey of Chinook salmon, whereas steelhead fed primarily on baetid nymphs and chironomid larvae. Diet overlap was low (0.45) between the species. The diet of Chinook was closely associated to the composition of the drift (0.88). Steelhead diet drew equally from the drift and benthos during the first year of the study, but more closely matched the benthos during the second year. Differences in prey selection, perhaps associated with differences in fish size, in addition to apparent differences in feeding mode (drift versus benthic), likely reduce competitive interactions between these species.

  17. Kelt Reconditioning: A Research Project to Enhance Iteroparity in Columbia Basin Steelhead (Oncorhynchus mykiss), 2004 Annual Report.

    SciTech Connect

    Hatch, Douglas R.; Branstetter, Ryan; Whiteaker, John

    2004-11-01

    Iteroparity, the ability to repeat spawn, is a life history strategy that is expressed by some species from the family Salmonidae. Rates of repeat spawning for post-development Columbia River steelhead Oncorhynchus mykiss populations range from 1.6 to 17%. It is expected that currently observed iteroparity rates for wild steelhead in the Basin are severely depressed due to development and operation of the hydropower system and various additional anthropogenic factors. Increasing the expression of historical repeat spawning rates using fish culturing methods could be a viable technique to assist the recovery of depressed steelhead populations, and could help reestablish this naturally occurring life history trait. Reconditioning is the process of culturing post-spawned fish (kelts) in a captive environment until they are able to reinitiate feeding, growth, and redevelop mature gonads. Kelt reconditioning techniques were initially developed for Atlantic salmon Salmo salar and sea-trout S. trutta. The recent Endangered Species Act listing of many Columbia River Basin steelhead populations has prompted interest in developing reconditioning methods for wild steelhead populations within the Basin. To test kelt steelhead reconditioning as a potential recovery tool, wild emigrating steelhead kelts were placed into one of three study groups (direct capture and transport, short-term reconditioning, or long-term reconditioning). Steelhead kelts from the Yakima River were collected at the Chandler Juvenile Monitoring Facility (CJMF, located on the Yakima River at river kilometer 75.6) from 15 March to 21 June 2004. In total, 842 kelts were collected for reconditioning at Prosser Hatchery. Captive specimens represented 30.5% (842 of 2,755) of the entire 2003-2004 Yakima River wild steelhead population, based on fish ladder counts at Prosser Dam. All steelhead kelts were reconditioned in 20-foot circular tanks, and fed freeze-dried krill initially or for the duration of the

  18. Kelt Reconditioning: A Research Project to Enhance Iteroparity in Columbia Basin Steelhead (Oncorhynchus mykiss), 2000 Annual Report.

    SciTech Connect

    Evans, Allen F.; Beaty, Roy E.; Hatch, Douglas R.

    2001-12-01

    Repeat spawning is a life history strategy that is expressed by some species from the family salmonidae. Natural rates of repeat spawning for Columbia River steelhead Oncorhynchus mykiss populations range from 1.6 to 17%. Increasing this repeat spawning rate using fish culture techniques could assist the recovery of depressed steelhead populations. Reconditioning is the process of culturing post-spawned fish (kelts) in a captive environment until they are able to grow and develop mature gonads. Kelt reconditioning techniques were initially developed for Atlantic salmon Salmo salar and sea-trout S. trutta. The recent Endangered Species Act listing of many Columbia Basin steelhead populations has prompted interest in developing reconditioning methods for local populations. The primary purpose of this project in 2000 was to test the general feasibility of collecting, feeding, and treating steelhead kelts in a captive environment. Steelhead kelts were collected from the Yakima River at the Chandler Juvenile Evaluation Facility (Rkm 48) from 12 March to 13 June 2000. Kelts were reconditioned at adjacent Prosser Hatchery in both rectangular and circular tanks and fed a mixed diet of starter paste, adult sized trout pellets, and freeze-dried krill. Formalin was used to control outbreaks of fungus, and we tested the use of ivermectin to control internal parasites (e.g., Salmincola spp.). Some the kelts that died during the reconditioning process were analyzed via pathology and gonad histology to ascertain the possible cause of death and to describe their reproductive development at the time of death. All surviving specimens were released for natural spawning on 12 December 2000. Overall success of the reconditioning process was based on the proportion of fish that survived captivity, gained weight, and on the number of fish that successfully underwent gonadal recrudescence. Many of the reconditioned kelts were radio tagged to assess their spawning migration behavior and

  19. Landscape scale measures of steelhead (Oncorhynchus mykiss) bioenergetic growth rate potential in Lake Michigan and comparison with angler catch rates

    USGS Publications Warehouse

    Hook, T.O.; Rutherford, E.S.; Brines, Shannon J.; Geddes, C.A.; Mason, D.M.; Schwab, D.J.; Fleischer, G.W.

    2004-01-01

    The relative quality of a habitat can influence fish consumption, growth, mortality, and production. In order to quantify habitat quality, several authors have combined bioenergetic and foraging models to generate spatially explicit estimates of fish growth rate potential (GRP). However, the capacity of GRP to reflect the spatial distributions of fishes over large areas has not been fully evaluated. We generated landscape scale estimates of steelhead (Oncorhynchus mykiss) GRP throughout Lake Michigan for 1994-1996, and used these estimates to test the hypotheses that GRP is a good predictor of spatial patterns of steelhead catch rates. We used surface temperatures (measured with AVHRR satellite imagery) and acoustically measured steelhead prey densities (alewife, Alosa pseudoharengus) as inputs for the GRP model. Our analyses demonstrate that potential steelhead growth rates in Lake Michigan are highly variable in both space and time. Steelhead GRP tended to increase with latitude, and mean GRP was much higher during September 1995, compared to 1994 and 1996. In addition, our study suggests that landscape scale measures of GRP are not good predictors of steelhead catch rates throughout Lake Michigan, but may provide an index of interannual variation in system-wide habitat quality.

  20. Use of streambed substrate as refuge by steelhead or rainbow trout Oncorhynchus mykiss during simulated freshets.

    PubMed

    Ligon, F K; Nakamoto, R J; Harvey, B C; Baker, P F

    2016-04-01

    A flume was used to estimate the carrying capacity of streambed substrates for juvenile steelhead or rainbow trout Oncorhynchus mykiss seeking refuge from simulated freshets. The simulated freshets had mean water column velocities of c. 1·1 m s(-1) . The number of O. mykiss finding cover within the interstices of the substrate was documented for different substrate sizes and levels of embeddedness. The availability of suitable refuges determined the carrying capacity of the substrate for O. mykiss. For the size of the O. mykiss tested [mean ± s.d. fork length (LF ) = 122 ± 12·6 mm], the number of interstices with depths ≥200 mm measured with a 14·0 mm diameter flexible plastic tube was the best predictor of the number of O. mykiss able to find cover (r(2)  = 0·75). Oncorhynchus mykiss seeking refuge from freshets may need deeper interstices than those seeking concealment at autumn or winter base flows. The availability of interstices suitable as refuge from high flows may determine autumn and winter carrying capacity. PMID:26932205

  1. Sex biased survival and differences in migration of wild steelhead (Oncorhynchus mykiss) smolts from two coastal Oregon rivers

    USGS Publications Warehouse

    Thompson, Neil F.; Leblanc, Camille A.; Romer, Jeremy D.; Schreck, Carl B.; Blouin, Michael S.; Noakes, David L. G.

    2016-01-01

    In salmonids with partial migration, females are more likely than males to undergo smoltification and migrate to the ocean (vs. maturing in freshwater). However, it is not known whether sex affects survivorship during smolt migration (from fresh water to entry into the ocean). We captured wild steelhead (Oncorhynchus mykiss) smolts in two coastal Oregon rivers (USA) and collected fin tissue samples for genetic sex determination (2009; N = 70 in the Alsea and N = 69 in the Nehalem, 2010; N = 25 in the Alsea). We implanted acoustic tags and monitored downstream migration and survival until entry in to the Pacific Ocean. Survival was defined as detection at an estuary/ocean transition array. We found no effect of sex on smolt survivorship in the Nehalem River in 2009, or in the Alsea River in 2010. However, males exhibited significantly lower survival than females in the Alsea River during 2009. Residency did not influence this result as an equal proportion of males and females did not reach the estuary entrance (11% of males, 9% of females). The sexes did not differ in timing or duration of migration, so those variables seem unlikely to explain sex-biased survivorship. Larger males had higher odds of survival than smaller males in 2009, but the body size of females did not affect survivorship. The difference in survivorship between years in the Alsea River could be due to flow conditions, which were higher in 2010 than in 2009. Our findings suggest that sex may affect steelhead smolt survival during migration, but that the difference in survivorship may be weak and not a strong factor influencing adult sex ratios.

  2. Ecosystem experiment reveals benefits of natural and simulated beaver dams to a threatened population of steelhead (Oncorhynchus mykiss)

    PubMed Central

    Bouwes, Nicolaas; Weber, Nicholas; Jordan, Chris E.; Saunders, W. Carl; Tattam, Ian A.; Volk, Carol; Wheaton, Joseph M.; Pollock, Michael M.

    2016-01-01

    Beaver have been referred to as ecosystem engineers because of the large impacts their dam building activities have on the landscape; however, the benefits they may provide to fluvial fish species has been debated. We conducted a watershed-scale experiment to test how increasing beaver dam and colony persistence in a highly degraded incised stream affects the freshwater production of steelhead (Oncorhynchus mykiss). Following the installation of beaver dam analogs (BDAs), we observed significant increases in the density, survival, and production of juvenile steelhead without impacting upstream and downstream migrations. The steelhead response occurred as the quantity and complexity of their habitat increased. This study is the first large-scale experiment to quantify the benefits of beavers and BDAs to a fish population and its habitat. Beaver mediated restoration may be a viable and efficient strategy to recover ecosystem function of previously incised streams and to increase the production of imperiled fish populations. PMID:27373190

  3. Ecosystem experiment reveals benefits of natural and simulated beaver dams to a threatened population of steelhead (Oncorhynchus mykiss).

    PubMed

    Bouwes, Nicolaas; Weber, Nicholas; Jordan, Chris E; Saunders, W Carl; Tattam, Ian A; Volk, Carol; Wheaton, Joseph M; Pollock, Michael M

    2016-01-01

    Beaver have been referred to as ecosystem engineers because of the large impacts their dam building activities have on the landscape; however, the benefits they may provide to fluvial fish species has been debated. We conducted a watershed-scale experiment to test how increasing beaver dam and colony persistence in a highly degraded incised stream affects the freshwater production of steelhead (Oncorhynchus mykiss). Following the installation of beaver dam analogs (BDAs), we observed significant increases in the density, survival, and production of juvenile steelhead without impacting upstream and downstream migrations. The steelhead response occurred as the quantity and complexity of their habitat increased. This study is the first large-scale experiment to quantify the benefits of beavers and BDAs to a fish population and its habitat. Beaver mediated restoration may be a viable and efficient strategy to recover ecosystem function of previously incised streams and to increase the production of imperiled fish populations. PMID:27373190

  4. Genetic basis of adult migration timing in anadromous steelhead discovered through multivariate association testing.

    PubMed

    Hess, Jon E; Zendt, Joseph S; Matala, Amanda R; Narum, Shawn R

    2016-05-11

    Migration traits are presumed to be complex and to involve interaction among multiple genes. We used both univariate analyses and a multivariate random forest (RF) machine learning algorithm to conduct association mapping of 15 239 single nucleotide polymorphisms (SNPs) for adult migration-timing phenotype in steelhead (Oncorhynchus mykiss). Our study focused on a model natural population of steelhead that exhibits two distinct migration-timing life histories with high levels of admixture in nature. Neutral divergence was limited between fish exhibiting summer- and winter-run migration owing to high levels of interbreeding, but a univariate mixed linear model found three SNPs from a major effect gene to be significantly associated with migration timing (p < 0.000005) that explained 46% of trait variation. Alignment to the annotated Salmo salar genome provided evidence that all three SNPs localize within a 46 kb region overlapping GREB1-like (an oestrogen target gene) on chromosome Ssa03. Additionally, multivariate analyses with RF identified that these three SNPs plus 15 additional SNPs explained up to 60% of trait variation. These candidate SNPs may provide the ability to predict adult migration timing of steelhead to facilitate conservation management of this species, and this study demonstrates the benefit of multivariate analyses for association studies. PMID:27170720

  5. A comparison of genetic variation between an anadromous steelhead, Oncorhynchus mykiss, population and seven derived populations sequestered in freshwater for 70 years

    USGS Publications Warehouse

    Thrower, F.; Guthrie, C., III; Nielsen, J.; Joyce, J.

    2004-01-01

    In 1926 cannery workers from the Wakefield Fisheries Plant at Little Port Walter in Southeast Alaska captured small trout, Oncorhynchus mykiss, from a portion of Sashin Creek populated with a wild steelhead (anadromous O. mykiss) run. They planted them into Sashin Lake which had been fishless to that time and separated from the lower stream by two large waterfalls that prevented upstream migration of any fish. In 1996 we sampled adult steelhead from the lower creek and juvenile O. mykiss from an intermediate portion of the creek, Sashin Lake, and five lakes that had been stocked with fish from Sashin Lake in 1938. Tissue samples from these eight populations were compared for variation in: microsatellite DNA at 10 loci; D-loop sequences in mitochondrial DNA; and allozymes at 73 loci known to be variable in steelhead. Genetic variability was consistently less in the Sashin Lake population and all derived populations than in the source anadromous population. The cause of this reduction is unknown but it is likely that very few fish survived to reproduce from the initial transplant in 1926. Stockings of 50-85 fish into five other fishless lakes in 1938 from Sashin Lake did not result in a similar dramatic reduction in variability. We discuss potential explanations for the observed patterns of genetic diversity in relation to the maintenance of endangered anadromous O. mykiss populations in freshwater refugia.

  6. Genetic Architecture of Migration-Related Traits in Rainbow and Steelhead Trout, Oncorhynchus mykiss

    PubMed Central

    Hecht, Benjamin C.; Thrower, Frank P.; Hale, Matthew C.; Miller, Michael R.; Nichols, Krista M.

    2012-01-01

    Although migration plays a critical role in the evolution and diversification of species, relatively little is known of the genetic architecture underlying this life history in any species. Rainbow and steelhead trout (Oncorhynchus mykiss) naturally segregate for both resident and migratory life-history types, respectively, as do other members of the salmonid family of fishes. Using an experimental cross derived from wild resident rainbow and wild migratory steelhead trout from Southeast Alaska and high throughput restriction-site associated DNA (RAD) tag sequencing, we perform a quantitative trait locus (QTL) analysis to identify the number, position, and relative contribution of genetic effects on a suite of 27 physiological and morphological traits associated with the migratory life history in this species. In total, 37 QTL are localized to 19 unique QTL positions, explaining 4–13.63% of the variation for 19 of the 27 migration-related traits measured. Two chromosomal positions, one on chromosome Omy12 and the other on Omy14 each harbor 7 QTL for migration-related traits, suggesting that these regions could harbor master genetic controls for the migratory life-history tactic in this species. Another QTL region on Omy5 has been implicated in several studies of adaptive life histories within this species and could represent another important locus underlying the migratory life history. We also evaluate whether loci identified in this out-crossed QTL study colocalize to genomic positions previously identified for associations with migration-related traits in a doubled haploid mapping family. PMID:22973549

  7. Using broad landscape level features to predict redd densities of steelhead trout (Oncorhynchus mykiss) and Chinook Salmon (Oncorhynchus tshawytscha) in the Methow River watershed, Washington

    USGS Publications Warehouse

    Romine, Jason G.; Perry, Russell W.; Connolly, Patrick J.

    2013-01-01

    We used broad-scale landscape feature variables to model redd densities of spring Chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) in the Methow River watershed. Redd densities were estimated from redd counts conducted from 2005 to 2007 and 2009 for steelhead trout and 2005 to 2009 for spring Chinook salmon. These densities were modeled using generalized linear mixed models. Variables examined included primary and secondary geology type, habitat type, flow type, sinuosity, and slope of stream channel. In addition, we included spring effect and hatchery effect variables to account for high densities of redds near known springs and hatchery outflows. Variables were associated with National Hydrography Database reach designations for modeling redd densities within each reach. Reaches were assigned a dominant habitat type, geology, mean slope, and sinuosity. The best fit model for spring Chinook salmon included sinuosity, critical slope, habitat type, flow type, and hatchery effect. Flow type, slope, and habitat type variables accounted for most of the variation in the data. The best fit model for steelhead trout included year, habitat type, flow type, hatchery effect, and spring effect. The spring effect, flow type, and hatchery effect variables explained most of the variation in the data. Our models illustrate how broad-scale landscape features may be used to predict spawning habitat over large areas where fine-scale data may be lacking.

  8. Growth of juvenile steelhead Oncorhynchus mykiss under size-selective pressure limited by seasonal bioenergetic and environmental constraints.

    PubMed

    Thompson, J N; Beauchamp, D A

    2016-09-01

    Increased freshwater growth of juvenile steelhead Oncorhynchus mykiss improved survival to smolt and adult stages, thus prompting an examination of factors affecting growth during critical periods that influenced survival through subsequent life stages. For three tributaries with contrasting thermal regimes, a bioenergetics model was used to evaluate how feeding rate and energy density of prey influenced seasonal growth and stage-specific survival of juvenile O. mykiss. Sensitivity analysis examined target levels for feeding rate and energy density of prey during the growing season that improved survival to the smolt and adult stages in each tributary. Simulated daily growth was greatest during warmer months (1 July to 30 September), whereas substantial body mass was lost during cooler months (1 December to 31 March). Incremental increases in annual feeding rate or energy density of prey during summer broadened the temperature range at which faster growth occurred and increased the growth of the average juvenile to match those that survived to smolt and adult stages. Survival to later life stages could be improved by increasing feeding rate or energy density of the diet during summer months, when warmer water temperatures accommodated increased growth potential. Higher growth during the summer period in each tributary could improve resiliency during subsequent colder periods that lead to metabolic stress and weight loss. As growth and corresponding survival rates in fresh water are altered by shifting abiotic regimes, it will be increasingly important for fisheries managers to better understand the mechanisms affecting growth limitations in rearing habitats and what measures might maintain or improve growth conditions and survival. PMID:27397641

  9. Growth of juvenile steelhead Oncorhynchus mykiss under size-selective pressure limited by seasonal bioenergetic and environmental constraints

    USGS Publications Warehouse

    Thompson, Jamie N.; Beauchamp, David A.

    2016-01-01

    Increased freshwater growth of juvenile steelhead Oncorhynchus mykiss improved survival to smolt and adult stages, thus prompting an examination of factors affecting growth during critical periods that influenced survival through subsequent life stages. For three tributaries with contrasting thermal regimes, a bioenergetics model was used to evaluate how feeding rate and energy density of prey influenced seasonal growth and stage-specific survival of juvenile O. mykiss. Sensitivity analysis examined target levels for feeding rate and energy density of prey during the growing season that improved survival to the smolt and adult stages in each tributary. Simulated daily growth was greatest during warmer months (1 July to 30 September), whereas substantial body mass was lost during cooler months (1 December to 31 March). Incremental increases in annual feeding rate or energy density of prey during summer broadened the temperature range at which faster growth occurred and increased the growth of the average juvenile to match those that survived to smolt and adult stages. Survival to later life stages could be improved by increasing feeding rate or energy density of the diet during summer months, when warmer water temperatures accommodated increased growth potential. Higher growth during the summer period in each tributary could improve resiliency during subsequent colder periods that lead to metabolic stress and weight loss. As growth and corresponding survival rates in fresh water are altered by shifting abiotic regimes, it will be increasingly important for fisheries managers to better understand the mechanisms affecting growth limitations in rearing habitats and what measures might maintain or improve growth conditions and survival.

  10. Individual condition and stream temperature influence early maturation of rainbow and steelhead trout, Oncorhynchus mykiss

    USGS Publications Warehouse

    McMillan, J.R.; Dunham, J.B.; Reeves, G.H.; Mills, J.S.; Jordan, C.E.

    2012-01-01

    Alternative male phenotypes in salmonine fishes arise from individuals that mature as larger and older anadromous marine-migrants or as smaller and younger freshwater residents. To better understand the processes influencing the expression of these phenotypes we examined the influences of growth in length (fork length) and whole body lipid content in rainbow trout (Oncorhynchus mykiss). Fish were sampled from the John Day River basin in northeast Oregon where both anadromous ("steelhead") and freshwater resident rainbow trout coexist. Larger males with higher lipid levels had a greater probability of maturing as a resident at age-1+. Among males, 38% were maturing overall, and the odds ratios of the logistic model indicated that the probability of a male maturing early as a resident at age-1+ increased 49% (95% confidence interval (CI) = 23-81%) for every 5 mm increase in length and 33% (95% CI = 10-61%) for every 0. 5% increase in whole body lipid content. There was an inverse association between individual condition and water temperature as growth was greater in warmer streams while whole body lipid content was higher in cooler streams. Our results support predictions from life history theory and further suggest that relationships between individual condition, maturation, and environmental variables (e. g., water temperature) are shaped by complex developmental and evolutionary influences. ?? 2011 Springer Science+Business Media B.V.

  11. Individual condition and stream temperature influence early maturation of rainbow and steelhead trout, Oncorhynchus mykiss

    USGS Publications Warehouse

    McMillan, John R.; Dunham, J.B.; Reeves, G.H.; Mills, J.S.; Jordan, C.E.

    2012-01-01

    Alternative male phenotypes in salmonine fishes arise from individuals that mature as larger and older anadromous marine-migrants or as smaller and younger freshwater residents. To better understand the processes influencing the expression of these phenotypes we examined the influences of growth in length (fork length) and whole body lipid content in rainbow trout (Oncorhynchus mykiss). Fish were sampled from the John Day River basin in northeast Oregon where both anadromous ("steelhead") and freshwater resident rainbow trout coexist. Larger males with higher lipid levels had a greater probability of maturing as a resident at age-1+. Among males, 38% were maturing overall, and the odds ratios of the logistic model indicated that the probability of a male maturing early as a resident at age-1+ increased 49% (95% confidence interval (CI) = 23-81%) for every 5 mm increase in length and 33% (95% CI = 10-61%) for every 0.5% increase in whole body lipid content. There was an inverse association between individual condition and water temperature as growth was greater in warmer streams while whole body lipid content was higher in cooler streams. Our results support predictions from life history theory and further suggest that relationships between individual condition, maturation, and environmental variables (e.g., water temperature) are shaped by complex developmental and evolutionary influences.

  12. Shifting Thresholds: Rapid Evolution of Migratory Life Histories in Steelhead/Rainbow Trout, Oncorhynchus mykiss.

    PubMed

    Phillis, Corey C; Moore, Jonathan W; Buoro, Mathieu; Hayes, Sean A; Garza, John Carlos; Pearse, Devon E

    2016-01-01

    Expression of phenotypic plasticity depends on reaction norms adapted to historic selective regimes; anthropogenic changes in these selection regimes necessitate contemporary evolution or declines in productivity and possibly extinction. Adaptation of conditional strategies following a change in the selection regime requires evolution of either the environmentally influenced cue (e.g., size-at-age) or the state (e.g., size threshold) at which an individual switches between alternative tactics. Using a population of steelhead (Oncorhynchus mykiss) introduced above a barrier waterfall in 1910, we evaluate how the conditional strategy to migrate evolves in response to selection against migration. We created 9 families and 917 offspring from 14 parents collected from the above- and below-barrier populations. After 1 year of common garden-rearing above-barrier offspring were 11% smaller and 32% lighter than below-barrier offspring. Using a novel analytical approach, we estimate that the mean size at which above-barrier fish switch between the resident and migrant tactic is 43% larger than below-barrier fish. As a result, above-barrier fish were 26% less likely to express the migratory tactic. Our results demonstrate how rapid and opposing changes in size-at-age and threshold size contribute to the contemporary evolution of a conditional strategy and indicate that migratory barriers may elicit rapid evolution toward the resident life history on timescales relevant for conservation and management of conditionally migratory species. PMID:26585381

  13. Investigations of Bull Trout (Salvelinus Confluentus), Steelhead Trout (Oncorhynchus Mykiss), and Spring Chinook Salmon (O. Tshawytscha) Interactions in Southeast Washington Streams. Final Report 1992.

    SciTech Connect

    Underwood, Keith D.

    1995-01-01

    The goal of this two year study was to determine if supplementation with hatchery reared steelhead trout (Oncorhynchus mykiss) and spring chinook salmon (O. tshawytscha) negatively impacted wild native bull trout (Salvelinus confluentus) through competitive interactions. Four streams with varying levels of fish supplementation activity were sampled in Southeast Washington. Tasks performed during this study were population density, relative abundance, microhabitat utilization, habitat availability, diet analysis, bull trout spawning ground surveys, radio telemetry of adult bull trout, and growth analysis. Results indicate that bull trout overlapped geographically with the supplemented species in each of the study streams suggesting competition among species was possible. Within a stream, bull trout and the supplemented species utilized dissimilar microhabitats and microhabitat utilization by each species was the same among streams suggesting that there was no shifts in microhabitat utilization among streams. The diet of bull trout and O. mykiss significantly overlapped in each of the study streams. The stream most intensely supplemented contained bull trout with the slowest growth and the non-supplemented stream contained bull trout with the fastest growth. Conversely, the stream most intensely supplemented contain steelhead with the fastest growth and the non-supplemented stream contained steelhead with the slowest growth. Growth indicated that bull trout may have been negatively impacted from supplementation, although other factors may have contributed. At current population levels, and current habitat quantity and quality, no impacts to bull trout as a result of supplementation with hatchery reared steelhead trout and spring chinook salmon were detected. Project limitations and future research recommendations are discussed.

  14. Evaluation of strobe lights to reduce turbine entrainment of juvenile steelhead (Oncorhynchus mykiss) at Cowlitz Falls Dam, Washington

    USGS Publications Warehouse

    2009-01-01

    We conducted a radiotelemetry evaluation to determine if strobe lights could be used to decrease turbine entrainment of juvenile steelhead (Oncorhynchus mykiss) at Cowlitz Falls Dam, Washington. We found that radio-tagged juvenile steelhead approached and entered two spillbays (one lighted, one unlighted) in equal proportions. However, the presence of strobe lights was associated with decreased spillbay residence time of juvenile steelhead and increased passage through induction slots (secondary turbine intakes located upstream of the ogee on the spillway). Mean residence time of tagged fish inside the lighted spillbay was 14 min compared to 62 min inside the unlighted spillbay. Radio-tagged steelhead passed through induction slots at a higher proportion in the lighted spillbay (55%) than in the unlighted spillbay (26%). Recent studies have suggested that strobe lights can induce torpor in juvenile salmonids. We believe that strobe light exposure affected fish in our study at a location where they were susceptible to high flows thereby reducing mean residence time and increasing the proportion of tagged fish entering induction slots in the lighted spillbay. Our results suggest that factors such as deployment location, exposure, and flow are important variables that should be considered when evaluating strobe lights as a potential fish-deterring management tool.

  15. Performance of juvenile steelhead trout (Oncorhynchus mykiss) produced from untreated and cryopreserved milt

    USGS Publications Warehouse

    Hayes, Michael C.; Rubin, Stephen P.; Hensleigh, Jay E.; Reisenbichler, Reginald R.; Wetzel, Lisa A.

    2005-01-01

    Despite the expanding use of milt cryopreservation in aquaculture, the performance of fish produced from this technique has not been fully explored beyond initial rearing stages. We compared the performance of juvenile steelhead Oncorhynchus mykiss produced from untreated (UM) and cryopreserved milt (CM) and reared for 4–9 months. For the 1996 brood, CM alevins were heavier (∼ 1.7%, P < 0.01) than UM alevins and length was influenced by a significant milt-by-family interaction (P < 0.03) suggesting a greater treatment effect for some families. No significant differences were found in length or weight (P > 0.05) for 1997 brood alevins and percent yolk was similar for both broods (P > 0.34). In growth and survival experiment I (GSE-I, 1996), UM and CM juveniles reared in separate tanks and fed to satiation (130 days) showed no significant differences in survival, length or weight (P > 0.05) between milt groups. In contrast, for UM and CM siblings reared in the same tank for 210 days on a low food ration (GSE-II), survival was similar (P > 0.05), but length (UM 4% > CM, P < 0.05) and possibly weight (UM 15% > CM, P = 0.08), were influenced by cryopreservation. Fish from the 1997 brood (GSE-III) were reared for 313 days in a repeat of GSE-II and no differences were found in survival (P = 0.47), length (P = 0.75) or weight (P = 0.76) suggesting considerable heterogeneity between broods. Performance of the 1996 brood was also tested for response to stress and a disease challenge. Cortisol responses of juveniles exposed to acute stress were not significantly different (P = 0.19), but mean cortisol was consistently and significantly greater (P < 0.01) for CM than UM fish exposed to a 48-h stress (increased density). After exposure to three dosages of the bacteria, Listonella anguillarum, we found similar mortality proportions (P = 0.72) for UM and CM fish. Variable juvenile performance for the parameters tested indicated significant

  16. Steelhead Supplementation Studies in Idaho Rivers, 1993 Annual report.

    SciTech Connect

    Byrne, Alan

    1996-01-01

    The Steelhead Supplementation Study was designed to evaluate the feasibility of using artificial production to increase natural steelhead Oncorhynchus mykiss populations and to collect baseline life history, genetic, and disease data from natural steelhead populations. To evaluate supplementation, the authors focused their experimental design on post-release survival, reproductive success, long-term fitness, and ecological interactions. They began field experiments in 1993 by outplanting hatchery adults and fingerlings to assess reproductive fitness and long-term survival. They snorkeled eight streams to estimate juvenile steelhead densities, recorded temperatures in 17 streams, and tagged natural steelhead in six streams with Passive Integrated Transponder (PIT) tags.

  17. Kelt Reconditioning: A Research Project to Enhance Iteroparity in Columbia Basin Steelhead (Oncorhynchus mykiss), 2005-2006 Annual Report.

    SciTech Connect

    Branstetter, Ryan; Whiteaker, John; Hatch, Douglas R.

    2006-12-01

    Iteroparity, the ability to repeat spawn, is a natural life history strategy that is expressed by some species from the family Salmonidae. Estimated rates of repeat spawning for post-development Columbia River steelhead Oncorhynchus mykiss populations range from 1.6 to 17%. It is expected that currently observed iteroparity rates for wild steelhead in the Basin are severely depressed due to development and operation of the hydropower system and various additional anthropogenic factors. Increasing the current expression of repeat spawning rates using fish culturing methods could be a viable technique to assist the recovery of depressed steelhead populations, and could help reestablish this naturally occurring life history trait. Reconditioning is the process of culturing post-spawned fish (kelts) in a captive environment until they are able to reinitiate feeding, growth, and redevelop mature gonads. Reconditioning techniques were initially developed for Atlantic salmon Salmo salar and sea-trout S. trutta. The recent Endangered Species Act listing of many Columbia River Basin steelhead populations has prompted interest in developing reconditioning methods for wild steelhead populations within the Basin. To test kelt steelhead reconditioning as a potential recovery tool, wild emigrating steelhead kelts were placed into one of four study groups (in river release, direct capture and transport, short-term reconditioning, or long-term reconditioning). Steelhead kelts from the Yakima River were collected at the Chandler Juvenile Monitoring Facility (CJMF, located on the Yakima River at river kilometer 75.6) from 7 March to 8 June 2006. In total, 348 kelts were collected for reconditioning at Prosser Hatchery. Captive specimens represented 17.0% (348 of 2,002) of the entire 2005-2006 Yakima River wild steelhead population, based on fish ladder counts at Prosser Dam. Steelhead kelts were reconditioned in 20-foot circular tanks, and fed freeze-dried krill initially (first 2

  18. Kelt Reconditioning: A Research Project to Enhance Iteroparity in Columbia Basin Steelhead (Oncorhynchus mykiss), 2005 Annual Report.

    SciTech Connect

    Branstetter, Ryan; Whiteaker, John; Hatch, Douglas R.

    2006-01-01

    Iteroparity, the ability to repeat spawn, is a natural life history strategy that is expressed by some species from the family Salmonidae. Estimated rates of repeat spawning for post-development Columbia River steelhead Oncorhynchus mykiss populations range from 1.6 to 17%. It is expected that currently observed iteroparity rates for wild steelhead in the Basin are severely depressed due to development and operation of the hydropower system and various additional anthropogenic factors. Increasing the current expression of repeat spawning rates using fish culturing methods could be a viable technique to assist the recovery of depressed steelhead populations, and could help reestablish this naturally occurring life history trait. Reconditioning is the process of culturing post-spawned fish (kelts) in a captive environment until they are able to reinitiate feeding, growth, and redevelop mature gonads. Reconditioning techniques were initially developed for Atlantic salmon Salmo salar and sea-trout S. trutta. The recent Endangered Species Act listing of many Columbia River Basin steelhead populations has prompted interest in developing reconditioning methods for wild steelhead populations within the Basin. To test kelt steelhead reconditioning as a potential recovery tool, wild emigrating steelhead kelts were placed into one of four study groups (in river release, direct capture and transport, short-term reconditioning, or long-term reconditioning). Steelhead kelts from the Yakima River were collected at the Chandler Juvenile Monitoring Facility (CJMF, located on the Yakima River at river kilometer 75.6) from 11 March to 23 June 2005. In total, 519 kelts were collected for reconditioning at Prosser Hatchery. Captive specimens represented 15.0% (519 of 3,451) of the entire 2004-2005 Yakima River wild steelhead population, based on fish ladder counts at Prosser Dam. Steelhead kelts were reconditioned in 20-foot circular tanks, and fed freeze-dried krill initially (first 2

  19. Cold-acclimation leads to differential regulation of the steelhead trout (Oncorhynchus mykiss) coronary microcirculation

    PubMed Central

    Costa, Isabel A. S. F.; Hein, Travis W.

    2015-01-01

    The regulation of vascular resistance in fishes has largely been studied using isolated large conductance vessels, yet changes in tissue perfusion/vascular resistance are primarily mediated by the dilation/constriction of small arterioles. Thus we adapted mammalian isolated microvessel techniques for use in fish and examined how several agents affected the tone/resistance of isolated coronary arterioles (<150 μm ID) from steelhead trout (Oncorhynchus mykiss) acclimated to 1, 5, and 10°C. At 10°C, the vessels showed a concentration-dependent dilation to adenosine (ADE; 61 ± 8%), sodium nitroprusside (SNP; 35 ± 10%), and serotonin (SER; 27 ± 2%) (all values maximum responses). A biphasic response (mild contraction then dilation) was observed in vessels exposed to increasing concentrations of epinephrine (EPI; 34 ± 9% dilation) and norepinephrine (NE; 32 ± 7% dilation), whereas the effect was less pronounced with bradykinin (BK; 12.5 ± 3.5% constriction vs. 6 ± 6% dilation). Finally, a mild constriction was observed after exposure to acetylcholine (ACh; 6.5 ± 1.4%), while endothelin (ET)-1 caused a strong dose-dependent increase in tone (79 ± 5% constriction). Acclimation temperature had varying effects on the responsiveness of vessels. The dilations induced by EPI, ADE, SER, and SNP were reduced/eliminated at 5°C and/or 1°C as compared with 10°C. In contrast, acclimation to 5 and 1°C increased the maximum constriction induced by ACh and the sensitivity of vessels to ET-1 (but not the maximum response) at 1°C was greater. Acclimation temperature had no effect on the response to NE, and responsiveness to BK was variable. PMID:25715834

  20. Ecological interactions between hatchery summer steelhead and wild Oncorhynchus mykiss in the Willamette River basin, 2014

    SciTech Connect

    Harnish, Ryan A.; Green, Ethan D.; Vernon, Christopher R.; Mcmichael, Geoffrey A.

    2014-12-23

    The purpose of this study was to determine the extent to which juvenile hatchery summer steelhead and wild winter steelhead overlap in space and time, to evaluate the extent of residualism among hatchery summer steelhead in the South Santiam River, and to evaluate the potential for negative ecological interactions among hatchery summer steelhead and wild winter steelhead. Because it is not possible to visually discern juvenile winter steelhead from resident rainbow trout, we treated all adipose-intact juvenile O. mykiss as one group that represented juvenile wild winter steelhead. The 2014 study objectives were to 1) estimate the proportion of hatchery summer steelhead that residualized in the South Santiam River in 2014, 2) determine the extent to which hatchery and naturally produced O. mykiss overlapped in space and time in the South Santiam River, and 3) characterize the behavioral interactions between hatchery-origin juvenile summer steelhead and naturally produced O. mykiss. We used a combination of radio telemetry and direct observations (i.e., snorkeling) to determine the potential for negative interactions between hatchery summer and wild winter steelhead juveniles in the South Santiam River. Data collected from these two independent methods indicated that a significant portion of the hatchery summer steelhead released as smolts did not rapidly emigrate from the South Santiam River in 2014. Of the 164 radio-tagged steelhead that volitionally left the hatchery, only 66 (40.2%) were detected outside of the South Santiam River. Forty-four (26.8% of 164) of the radio-tagged hatchery summer steelhead successfully emigrated to Willamette Falls. Thus, the last known location of the majority of the tagged fish (98 of 164 = 59.8%) was in the South Santiam River. Thirty-three of the tagged hatchery steelhead were detected in the South Santiam River during mobile-tracking surveys. Of those, 21 were found to be alive in the South Santiam River over three months after

  1. Kelt Reconditioning: A Research Project to Enhance Iteroparity in Columbia Basin Steelhead (Oncorhynchus mykiss), 2003 Annual Report.

    SciTech Connect

    Hatch, Douglas R.; Branstetter, Ryan; Blodgett, Joe

    2004-03-01

    Repeat spawning is a life history strategy that is expressed by some species from the family Salmonidae. Rates of repeat spawning for post-development Columbia River steelhead Oncorhynchus mykiss populations range from 1.6 to 17%. It is expected that currently observed iteroparity rates for wild steelhead in the Basin are severely depressed due to development and operation of the hydropower system and various additional anthropogenic factors. Increasing the natural expression of historical repeat spawning rates using fish culturing methods could be a viable technique to assist the recovery of depressed steelhead populations. Reconditioning is the process of culturing post-spawned fish (kelts) in a captive environment until they are able to reinitiate feeding, growth, and redevelop mature gonads. Kelt reconditioning techniques were initially developed for Atlantic salmon Salmo salar and sea-trout S. trutta. The recent Endangered Species Act listing of many Columbia Basin steelhead populations has prompted interest in developing reconditioning methods for wild steelhead populations within the Basin. To test kelt steelhead reconditioning as a potential recovery tool, we captured wild emigrating steelhead kelts from the Yakima River and evaluated reconditioning (short and long-term) success and diet formulations at Prosser Hatchery on the Yakima River. Steelhead kelts from the Yakima River were collected at the Chandler Juvenile Monitoring Facility (CJMF, located on the Yakima River at river kilometer 75.6) from 12 March to 28 May 2003. In total, 690 kelts were collected for reconditioning at Prosser Hatchery. Captive specimens represented 30.8% (690 of 2,235) of the entire 2002-2003 Yakima River wild steelhead population, based on fish ladder counts at Prosser Dam. All steelhead kelts were reconditioned in circular tanks, fed freeze-dried krill and received hw-wiegandt multi vit dietary supplement; long-term steelhead kelts also received Moore-Clark pellets

  2. Kelt Reconditioning: A Research Project to Enhance Iteroparity in Columbia Basin Steelhead (Oncorhynchus mykiss), 2002 Annual Report.

    SciTech Connect

    Hatch, Douglas R.; Branstetter, Ryan; Blodgett, Joe

    2003-07-01

    Repeat spawning is a life history strategy that is expressed by some species from the family Salmonidae. Rates of repeat spawning for post-development Columbia River steelhead Oncorhynchus mykiss populations range from 1.6 to 17%. It is expected that currently observed iteroparity rates for wild steelhead in the Basin are severely depressed due to development and operation of the hydropower system and various additional anthropogenic factors. Increasing the natural expression of historical repeat spawning rates using fish culturing means could be a viable technique to assist the recovery of depressed steelhead populations. Reconditioning is the process of culturing post-spawned fish (kelts) in a captive environment until they are able to reinitiate feeding, growth, and again develop mature gonads. Kelt reconditioning techniques were initially developed for Atlantic salmon Salmo salar and sea-trout S. trutta. The recent Endangered Species Act listing of many Columbia Basin steelhead populations has prompted interest in developing reconditioning methods for wild steelhead populations within the Basin. To test kelt steelhead reconditioning as a potential recovery tool, we captured wild emigrating steelhead kelts from the Yakima River and evaluated reconditioning (short and long-term) success and diet formulations at Prosser Hatchery on the Yakima River. Steelhead kelts from the Yakima River were collected at the Chandler Juvenile Evaluation Facility (CJEF, located at Yakima River kilometer 48) from March 12 to June 13, 2002. In total, 899 kelts were collected for reconditioning at Prosser Hatchery. Captive specimens represented 19.8% (899 of 4,525) of the entire 2001-2002 Yakima River wild steelhead population, based on fish ladder counts at Prosser Dam. Kelts were reconditioned in circular tanks and were fed freeze-dried krill, Moore-Clark pellets, altered Moore-Clark pellets (soaked in krill extract and dyed), or a combination of the altered Moore

  3. Some physiological consequences of handling stress in the juvenile coho salmon (Oncorhynchus kisutch) and steelhead trout (Salmo gairdneri)

    USGS Publications Warehouse

    Wedemeyer, Gary

    1972-01-01

    The stress of handling juvenile coho salmon (Oncorhynchus kisutch) and steelhead trout (Salmo gairdneri) in soft water and in water with added salts was evaluated using blood and tissue chemistry fluctuations as indices of metabolic and endocrine function. Changes in plasma glucose, chloride, calcium, and cholesterol levels indicated that significant osmoregulatory and metabolic dysfunctions can occur and persist for about 24 hr after handling in soft water. Pituitary activation, as judged by lack of interrenal ascorbate depletion, did not occur. Increasing the ambient NaCl and Ca++ levels to about 100 milliosmols and 75–120 ppm, respectively, partially or completely alleviated the hyperglycemia and hypochloremia indicating that the stress of handling had been reduced.

  4. Emigration of Natural and Hatchery Naco x (Chinook salmon; Oncorhynchus tshawytscha) and Heeyey (Steelhead; Oncorhynchus mykiss) Smolts from the Imnaha River, Oregon from 5 October 2006 to 21 June 2007, Annual Report 2007.

    SciTech Connect

    Michaels, Brian; Espinosa, Neal

    2009-02-18

    This report summarizes the Nez Perce Tribe (NPT) Department of Fisheries Resources Management (DFRM) results for the Lower Snake River Compensation Plan (LSRCP) Hatchery Evaluation studies and the Imnaha River Smolt Monitoring Program (SMP) for the 2007 smolt migration from the Imnaha River, Oregon. These studies are closely coordinated and provide information about juvenile natural and hatchery spring/summer Naco x (Chinook Salmon; Oncorhynchus tshawytscha) and Heeyey (steelhead; O. mykiss) biological characteristics, emigrant timing, survival, arrival timing and travel time to the Snake River dams and McNary Dam (MCD) on the Columbia River. These studies provide information on listed Naco x (Chinook salmon) and Heeyey (steelhead) for the Federal Columbia River Power System (FCRPS) Biological Opinion (NMFS 2000). The Lower Snake River Compensation Plan program's goal is to maintain a hatchery production program of 490,000 Naco x (Chinook salmon) and 330,000 Heeyey (steelhead) for annual release in the Imnaha River (Carmichael et al. 1998, Whitesel et al. 1998). These hatchery releases occur to compensate for fish losses due to the construction and operation of the four lower Snake River hydroelectric facilities. One of the aspects of the LSRCP hatchery evaluation studies in the Imnaha River is to determine natural and hatchery Naco x (Chinook salmon) and Heeyey (steelhead) smolt performance, emigration characteristics and survival (Kucera and Blenden 1998). A long term monitoring effort was established to document smolt emigrant timing and post release survival within the Imnaha River, estimate smolt survival downstream to McNary Dam, compare natural and hatchery smolt performance, and collect smolt-to-adult return information. This project collects information for, and is part of, a larger effort entitled Smolt Monitoring by Federal and Non-Federal Agencies (BPA Project No. 198712700). This larger project provides data on movement of smolts out of major drainages

  5. How much does inbreeding contribute to the reduced fitness of hatchery-born steelhead (Oncorhynchus mykiss) in the wild?

    PubMed

    Christie, Mark R; French, Rod A; Marine, Melanie L; Blouin, Michael S

    2014-01-01

    Many declining populations are supplemented with captive-born individuals that are released directly into the wild. Because captive-born individuals can have lower fitness in the wild than their wild-born counterparts, a comprehensive understanding of the mechanisms responsible for the reduced fitness of these individuals is required for appropriate conservation and management decisions. Inbreeding among captive-born individuals is one plausible mechanism because captive breeding programs frequently use small numbers of breeders to create large numbers of siblings that are subsequently released together into the wild. We tested this hypothesis in a supplementation program for steelhead (Oncorhynchus mykiss) from the Hood River, Oregon, for which first-generation hatchery fish were demonstrated to have lower fitness in the wild than their wild-born counterparts. To determine the contribution of inbreeding to this fitness decline, we first assigned 11 run-years of hatchery steelhead (3005 fish) back to their broodstock parents (462 fish) using 8 polymorphic microsatellite loci. By combining pedigree analyses with species-specific estimates of genetic load, we found that inbreeding could at most account for a 1-4% reduction in the fitness of hatchery fish relative to wild fish. Thus, inbreeding alone cannot adequately explain the 15% average fitness decline observed in first-generation hatchery fish from this population. PMID:24187426

  6. The impact of small irrigation diversion dams on the recent migration rates of steelhead and redband trout (Oncorhynchus mykiss)

    USGS Publications Warehouse

    Weigel, Dana E.; Connolly, Patrick J.; Powell, Madison S.

    2013-01-01

    Barriers to migration are numerous in stream environments and can occur from anthropogenic activities (such as dams and culverts) or natural processes (such as log jams or dams constructed by beaver (Castor canadensis)). Identification of barriers can be difficult when obstructions are temporary or incomplete providing passage periodically. We examine the effect of several small irrigation diversion dams on the recent migration rates of steelhead (Oncorhynchus mykiss) in three tributaries to the Methow River, Washington. The three basins had different recent migration patterns: Beaver Creek did not have any recent migration between sites, Libby Creek had two-way migration between sites and Gold Creek had downstream migration between sites. Sites with migration were significantly different from sites without migration in distance, number of obstructions, obstruction height to depth ratio and maximum stream gradient. When comparing the sites without migration in Beaver Creek to the sites with migration in Libby and Gold creeks, the number of obstructions was the only significant variable. Multinomial logistic regression identified obstruction height to depth ratio and maximum stream gradient as the best fitting model to predict the level of migration among sites. Small irrigation diversion dams were limiting population interactions in Beaver Creek and collectively blocking steelhead migration into the stream. Variables related to stream resistance (gradient, obstruction number and obstruction height to depth ratio) were better predictors of recent migration rates than distance, and can provide important insight into migration and population demographic processes in lotic species.

  7. Testing of male sockeye salmon (Oncorhynchus nerka) and steelhead trout (Salmo gairdneri) for infectious hematopoietic necrosis virus

    USGS Publications Warehouse

    Mulcahy, D.; Pascho, R.J.; Batts, W.N.

    1987-01-01

    Infectious hematopoietic necrosis (IHN) virus has been isolated only rarely from whole milt samples of male sockeye salmon (Oncorhynchus nerka). In 3 yr of testing, virus incidences in males ranged from 0 to 13% when milt was sampled but were 60–100% with spleen or kidney. When IHN virus was isolated from sockeye salmon milt at titers less than 3.00 log10 plaque-forming units (pfu)/mL, the level of virus in the kidney or spleen exceeded 7.00 log10 pfu/g. Higher rates of IHN virus isolation from kidney or spleen than from milt were also generally found in steelhead trout (Salmo gairdneri), although the differences were less pronounced than in sockeye salmon. Furthermore, virus was sometimes isolated from steelhead trout milt when the level of virus in kidney or spleen samples was very low, and was recovered from some milt samples when none was isolated from the corresponding spleen sample. When male salmonids are tested for IHN virus, kidney or spleen samples are superior to whole milt, but milt should be included for critical examinations.

  8. The evolutionary history of steelhead (Oncorhynchus mykiss) along the US Pacific Coast: Developing a conservation strategy using genetic diversity

    USGS Publications Warehouse

    Nielsen, J.L.

    1999-01-01

    Changes in genetic variation across a species range may indicate patterns of population structure resulting from past ecological and demographic events that are otherwise difficult to infer and thus provide insight into evolutionary development. Genetic data is used, drawn from 11 microsatellite loci amplified from anadromous steelhead (Oncorhynchus mykiss) sampled throughout its range in the eastern Pacific Ocean, to explore population structure at the southern edge in California. Steelhead populations in this region represent less than 10% of their reported historic abundance and survive in very small populations found in fragmented habitats. Genetic data derived from three independent molecular systems (allozymes, mtDNA, and microsatellites) have shown that the southernmost populations are characterized by a relatively high genetic diversity. Two hypothetical models supporting genetic population substructure such as observed were considered: (1) range expansion with founder-flush effects and subsequent population decline; (2) a second Pleistocene radiation from the Gulf of California. Using genetic and climatic data, a second Pleistocene refugium contributing to a southern ecotone seems more feasible. These data support strong conservation measures based on genetic diversity be developed to ensure the survival of this uniquely diverse gene pool.

  9. Behavior and movement of adult summer steelhead following collection and release, lower Cowlitz River, Washington, 2012--2013

    USGS Publications Warehouse

    Kock, Tobias J.; Liedtke, Theresa L.; Ekstrom, Brian K.; Rondorf, Dennis W.; Gleizes, Chris; Dammers, Wolf; Gibson, Scott; Murphy, Jamie

    2013-01-01

    Historically, adult summer steelhead Oncorhynchus mykiss returning to hatcheries on the lower Cowlitz River were sometimes transported and released in the river (recycled) to provide additional angling opportunity for the popular sport fishery in the basin. However, this practice has not been used in recent years because of concerns associated with interactions between hatchery fish and wild fish. Fishery managers were interested in resuming recycling but lacked information regarding effects of this practice on wild steelhead so we conducted a study during 2012–2013 to: (1) enumerate recycled steelhead that returned to the hatchery or were removed by anglers; and (2) determine if steelhead that were not removed from the river remained in the system where they could interact with wild fish. During June–August 2012, a total of 549 summer steelhead were captured at the Cowlitz Salmon Hatchery, tagged, and released downstream near the Interstate 5 Bridge. All recycled steelhead were tagged with a white Floy® tag and opercle-punched; 109 (20 percent) of these fish also were radio-tagged. All adult steelhead that return to the hatchery were handled by hatchery staff so recycled steelhead that returned to the hatchery were enumerated daily. A creel survey and voluntary angler reports were used to determine the number of recycled steelhead that were caught by anglers. We established three fixed telemetry monitoring sites on the mainstem Cowlitz River and eight additional sites were deployed on tributaries to the lower Cowlitz River where wild winter steelhead are known to spawn. We also conducted mobile tracking from a boat during October 2012, November 2012, and January 2013 to locate radio-tagged fish. A total of 10,722 summer steelhead were captured at the Cowlitz Salmon Hatchery in 2012, which was the largest return since 2008. River flows during much of the study period were similar to 2008–2011 average flows, however, high-flow periods in July and November

  10. Aggression and feeding of hatchery-reared and naturally reared steelhead (Oncorhynchus mykiss) fry in a laboratory flume and a comparison with observations in natural streams

    USGS Publications Warehouse

    Riley, S.C.; Tatara, C.P.; Scheurer, J.A.

    2005-01-01

    We quantified the aggression and feeding of naturally reared steelhead (Oncorhynchus mykiss) fry stocked into a laboratory flume with naturally reared fry or hatchery-reared fry from conventional and enriched rearing environments at three densities in the presence and absence of predators, and compared the aggression and feeding observed in the flume to that observed in two streams. Steelhead fry attack rate increased with density and was reduced in the presence of predators, but was not affected by rearing treatment. Threat rate appeared to increase with density and was significantly affected by rearing treatment combination, but was not significantly affected by predator presence. Feeding rate was not affected by density or rearing treatment, but was reduced in the presence of predators. The rate of aggression by steelhead fry in two streams was lower than that observed in the laboratory and did not increase with density. Rates of aggression and feeding of hatchery-reared and wild steelhead fry were not significantly different in the streams. Overall, we found no evidence that hatchery rearing environments caused higher aggression in steelhead fry. Laboratory observations of salmonid aggression, particularly at high density, may not reflect aggression levels in the wild. ?? 2005 NRC.

  11. The role of beaver in shaping steelhead trout (Oncorhynchus mykiss) habitat complexity and thermal refugia in a central Oregon stream

    NASA Astrophysics Data System (ADS)

    Consolati, F.; Wheaton, J. M.; Neilson, B. T.; Bouwes, N.; Pollock, M. M.

    2012-12-01

    The incised and degraded habitat of Bridge Creek, tributary to the John Day River in central Oregon, is thought to be limiting the local population of ESA-listed steelhead trout (Oncorhynchus mykiss). Restoration efforts for this watershed are aimed to improve their habitat through reconnecting the channel with portions of its former floodplain (now terraces) to increase stream habitat complexity and the extent of riparian vegetation. This is being done via the installation of over a hundred beaver dam support (BDS) structures that are designed to either mimic beaver dams or support existing beaver dams. The overall objective of this study is to determine if the BDS structures have had an effect on stream channel habitat complexity and thermal refugia in selected sections of Bridge Creek. Analysis of stream temperature data in restoration treatment and control areas will show the effects of beaver dams on stream temperature. Analysis of aerial imagery and high resolution topographic data will exhibit how the number and types of geomorphic units have changed after the construction of beaver dams. Combined, the results of this research are aimed to increase our understanding of how beaver dams impact fish habitat and stream temperature.

  12. The effect of diet on dorsal fin erosion in steelhead trout (Oncorhynchus mykiss)

    USGS Publications Warehouse

    Lellis, W.A.; Barrows, F.T.

    1997-01-01

    A 2 X 2 factorial experiment of diet type (krill vs. fish meal) and steroid supplementation (0 vs. 30 ??g 17??-methyltestosterone kg-1) was conducted to determine the effects on dorsal fin erosion in steelhead trout. Triplicate tanks of 250 fry were fed one of the four diets at a rate calculated to produce 115 g fish in 34 weeks. Fish were transferred to larger tanks when mean density index reached 0.40. Dorsal fin index (DFI, measured as mean dorsal fin height X 100/total fish length) was greater (P < 0.001) among fish fed krill-based diets than for fish fed fish-based diets at weeks 12, 22, and 34 of the trial. Added testosterone decreased (p = 0.04) DFI among fish fed the krill diet at week 12 but otherwise had no effect on fin condition. Addition of testosterone to either diet type decreased (P = 0.02) critical thermal maximum, which is a measure of fish resistance to thermal stress. The results suggest that diet composition can influence the rate of dorsal fin erosion in steelhead trout through a metabolic, behavioral, or combined change.

  13. Investigations of Bull Trout (Salvelinus Confluentus), Steelhead Trout (Oncorhynchus Mykiss), and Spring Chinook Salmon (O. Tshawytscha) Interactions in Southeast Washington Streams : 1991 Annual Report.

    SciTech Connect

    Martin, Steven W.

    1992-07-01

    Bull trout (Salvelinus confluentus) are native to many tributaries of the Snake River in southeast Washington. The Washington Department of Wildlife (WDW) and the American Fisheries Society (AFS) have identified bull trout as a species of special concern which means that they may become threatened or endangered by relatively, minor disturbances to their habitat. Steelhead trout/rainbow trout (Oncorhynchus mykiss) and spring chinook salmon (O.tshawytscha) are also native to several tributaries of the Snake river in southeast Washington. These species of migratory fishes are depressed, partially due to the construction of several dams on the lower Snake river. In response to decreased run size, large hatchery program were initiated to produce juvenile steelhead and salmon to supplement repressed tributary stocks, a practice known as supplementation. There is a concern that supplementing streams with artificially high numbers of steelhead and salmon may have an impact on resident bull trout in these streams. Historically, these three species of fish existed together in large numbers, however, the amount of high-quality habitat necessary for reproduction and rearing has been severely reduced in recent years, as compared to historic amounts. The findings of the first year of a two year study aimed at identifying species interactions in southeast Washington streams are presented in this report. Data was collected to assess population dynamics; habitat utilization and preference, feeding habits, fish movement and migration, age, condition, growth, and the spawning requirements of bull trout in each of four streams. A comparison of the indices was then made between the study streams to determine if bull trout differ in the presence of the putative competitor species. Bull trout populations were highest in the Tucannon River (supplemented stream), followed by Mill Creek (unsupplemented stream). Young of the year bull trout utilized riffle and cascade habitat the most in all

  14. Steelhead Supplementation in Idaho Rivers : 2001 Project Progress Report.

    SciTech Connect

    Byrne, Alan

    2002-03-01

    In 2001, Idaho Department of Fish and Game (IDFG) continued an assessment of the Sawtooth Hatchery steelhead Oncorhynchus mykiss stock to reestablish natural populations in Beaver and Frenchman creeks in the upper Salmon River. Crews stocked both streams with 20 pair of hatchery adults, and I estimated the potential smolt production from the 2000 adult outplants. n the Red River drainage, IDFG stocked Dworshak hatchery stock fingerlings and smolts from 1993 to 1999 to assess which life stage produces more progeny when the adults return to spawn. In 2001, IDFG operated the Red River weir to trap adults that returned from these stockings, but none were caught from either group. Wild steelhead populations in the Lochsa and Selway river drainages were assessed and the chinook salmon Oncorhynchus tshawytscha escapement was enumerated in Fish Creek. I estimated that 75 wild adult steelhead and 122 adult chinook salmon returned to Fish Creek in 2001. I estimated that slightly more than 30,000 juvenile steelhead migrated out of Fish Creek. This is the largest number of steelhead to migrate out of Fish Creek in a single year since I began estimating the yearly migration in 1994. Juvenile steelhead densities in Lochsa and Selway tributaries were somewhat higher in 2001 than those observed in 2000. Crews from IDFG collected over 4,800 fin samples from wild steelhead in 74 streams of the Clearwater, Snake, and Salmon river drainages and from five hatchery stocks during the summer of 2000 for a DNA analysis to assess Idaho's steelhead stock structure. The DNA analysis was subcontracted to Dr. Jennifer Nielsen, Alaska Biological Science Center, Anchorage. Her lab developed protocols to use for the analysis in 2001 and is continuing to analyze the samples. Dr. Nielsen plans to have the complete set of wild and hatchery stocks analyzed in 2002.

  15. Spatial Ecological Processes and Local Factors Predict the Distribution and Abundance of Spawning by Steelhead (Oncorhynchus mykiss) across a Complex Riverscape

    PubMed Central

    Falke, Jeffrey A.; Dunham, Jason B.; Jordan, Christopher E.; McNyset, Kristina M.; Reeves, Gordon H.

    2013-01-01

    Processes that influence habitat selection in landscapes involve the interaction of habitat composition and configuration and are particularly important for species with complex life cycles. We assessed the relative influence of landscape spatial processes and local habitat characteristics on patterns in the distribution and abundance of spawning steelhead (Oncorhynchus mykiss), a threatened salmonid fish, across ∼15,000 stream km in the John Day River basin, Oregon, USA. We used hurdle regression and a multi-model information theoretic approach to identify the relative importance of covariates representing key aspects of the steelhead life cycle (e.g., site access, spawning habitat quality, juvenile survival) at two spatial scales: within 2-km long survey reaches (local sites) and ecological neighborhoods (5 km) surrounding the local sites. Based on Akaike’s Information Criterion, models that included covariates describing ecological neighborhoods provided the best description of the distribution and abundance of steelhead spawning given the data. Among these covariates, our representation of offspring survival (growing-season-degree-days, °C) had the strongest effect size (7x) relative to other predictors. Predictive performances of model-averaged composite and neighborhood-only models were better than a site-only model based on both occurrence (percentage of sites correctly classified = 0.80±0.03 SD, 0.78±0.02 vs. 0.62±0.05, respectively) and counts (root mean square error = 3.37, 3.93 vs. 5.57, respectively). The importance of both temperature and stream flow for steelhead spawning suggest this species may be highly sensitive to impacts of land and water uses, and to projected climate impacts in the region and that landscape context, complementation, and connectivity will drive how this species responds to future environments. PMID:24265762

  16. Spatial ecological processes and local factors predict the distribution and abundance of spawning by steelhead (Oncorhynchus mykiss) across a complex riverscape

    USGS Publications Warehouse

    Falke, Jeffrey A.; Dunham, Jason B.; Jordan, Christopher E.; McNyset, Kris M.; Reeves, Gordon H.

    2013-01-01

    Processes that influence habitat selection in landscapes involve the interaction of habitat composition and configuration and are particularly important for species with complex life cycles. We assessed the relative influence of landscape spatial processes and local habitat characteristics on patterns in the distribution and abundance of spawning steelhead (Oncorhynchus mykiss), a threatened salmonid fish, across ~15,000 stream km in the John Day River basin, Oregon, USA. We used hurdle regression and a multi-model information theoretic approach to identify the relative importance of covariates representing key aspects of the steelhead life cycle (e.g., site access, spawning habitat quality, juvenile survival) at two spatial scales: within 2-km long survey reaches (local sites) and ecological neighborhoods (5 km) surrounding the local sites. Based on Akaike’s Information Criterion, models that included covariates describing ecological neighborhoods provided the best description of the distribution and abundance of steelhead spawning given the data. Among these covariates, our representation of offspring survival (growing-season-degree-days, °C) had the strongest effect size (7x) relative to other predictors. Predictive performances of model-averaged composite and neighborhood-only models were better than a site-only model based on both occurrence (percentage of sites correctly classified = 0.80±0.03 SD, 0.78±0.02 vs. 0.62±0.05, respectively) and counts (root mean square error = 3.37, 3.93 vs. 5.57, respectively). The importance of both temperature and stream flow for steelhead spawning suggest this species may be highly sensitive to impacts of land and water uses, and to projected climate impacts in the region and that landscape context, complementation, and connectivity will drive how this species responds to future environments.

  17. Evaluation and Monitoring of Wild /Natural Steelhead Trout Production, 1996 Annual Report.

    SciTech Connect

    Leth, Brian D.; Holubetz, Terry B.; Nemeth, Doug

    2000-01-01

    This project was initiated to provide additional, and more definitive, information regarding wild steelhead Oncorhynchus mykiss populations in Idaho. Important streams for wild steelhead production were identified and selected for monitoring. Monitoring activities employed among streams varied, but generally included: aerial redd counts, placement of adult weirs, enumeration of juveniles through mask and snorkel counts, and emigrant trapping. This report details activities during the 1996 field season.

  18. Wild Steelhead Studies, Salmon and Clearwater Rivers, 1994 Annual Report.

    SciTech Connect

    Holubetz, Terry B; Leth, Brian D.

    1997-05-01

    To enumerate chinook salmon Oncorhynchus tshawytscha and steelhead O. mykiss adult escapements, weirs were operated in Marsh, Chamberlain, West Fork Chamberlain, and Running creeks. Beginning in late July 1994, a juvenile trap was installed in Running Creek to estimate juvenile outmigrants. Plans have been completed to install a weir in Rush Creek to enumerate steelhead adult escapement beginning in spring 1995. Design and agreements are being developed for Johnson Creek and Captain John Creek. Data collected in 1993 and 1994 indicate that spring chinook salmon and group-B steelhead populations and truly nearing extinction levels. For example, no adult salmon or steelhead were passed above the West Fork Chamberlain Creek weir in 1984, and only 6 steelhead and 16 chinook salmon were passed into the important spawning area on upper Marsh Creek. Group-A steelhead are considerably below desirable production levels, but in much better status than group-B stocks. Production of both group-A and group-B steelhead is being limited by low spawning escapements. Studies have not been initiated on wild summer chinook salmon stocks.

  19. Early ocean survival and marine movements of hatchery and wild steelhead trout ( Oncorhynchus mykiss) determined by an acoustic array: Queen Charlotte Strait, British Columbia

    NASA Astrophysics Data System (ADS)

    Welch, David W.; Ward, Bruce R.; Batten, Sonia D.

    2004-03-01

    Early ocean movements, residency, and survival of steelhead (Oncorhynchus mykiss) were examined in Queen Charlotte Strait, a large (20×100 km2) marine area separating Vancouver Island from the mainland. The results provide the first detailed data on the ocean biology of hatchery and wild steelhead smolts. Initial ocean movements were not strongly directed, with most smolts swimming in the range of 0.2-0.5 body length (BL) s-1. The majority (78%) vacated Queen Charlotte Strait within 1 week of release in freshwater. Relative marine survival of hatchery smolts surgically implanted 1 month prior to release was identical to that of wild smolts implanted on the day of release; survival of hatchery smolts transported to the study site, implanted, and released all on the same day was significantly lower. The results suggest that the early marine survival of hatchery and wild smolts may be fundamentally similar, but that the cumulative stress of transportation and surgery may reduce post-surgery survival. Hatchery smolts moved at higher average swimming speeds than wild smolts, but the difference was not statistically significant. Early marine survival within the study region appears to be relatively high (⩾55%), contradicting assumptions that the early marine phase is the critical period for determining salmon recruitment.

  20. Spatial partitioning and asymmetric hybridization among sympatric coastal steelhead trout (Oncorhynchus mykiss irideus), coastal cutthroat trout (O. clarki clarki) and interspecific hybrids

    USGS Publications Warehouse

    Ostberg, C.O.; Slatton, S.L.; Rodriguez, R.J.

    2004-01-01

    Hybridization between sympatric species provides unique opportunities to examine the contrast between mechanisms that promote hybridization and maintain species integrity. We surveyed hybridization between sympatric coastal steelhead (Oncorhynchus mykiss irideus) and coastal cutthroat trout (O. clarki clarki) from two streams in Washington State, Olsen Creek (256 individuals sampled) and Jansen Creek (431 individuals sampled), over a 3-year period. We applied 11 O. mykiss-specific nuclear markers, 11 O. c. clarki-specific nuclear markers and a mitochondrial DNA marker to assess spatial partitioning among species and hybrids and determine the directionality of hybridization. F1 and post-F1 hybrids, respectively, composed an average of 1.2% and 33.6% of the population sampled in Jansen Creek, and 5.9% and 30.4% of the population sampled in Olsen Creek. A modest level of habitat partitioning among species and hybrids was detected. Mitochondrial DNA analysis indicated that all F 1 hybrids (15 from Olsen Creek and five from Jansen Creek) arose from matings between steelhead females and cutthroat males implicating a sneak spawning behaviour by cutthroat males. First-generation cutthroat backcrosses contained O. c. clarki mtDNA more often than expected suggesting natural selection against F1 hybrids. More hybrids were backcrossed toward cutthroat than steelhead and our results indicate recurrent hybridization within these creeks. Age analysis demonstrated that hybrids were between 1 and 4 years old. These results suggest that within sympatric salmonid hybrid zones, exogenous processes (environmentally dependent factors) help to maintain the distinction between parental types through reduced fitness of hybrids within parental environments while divergent natural selection promotes parental types through distinct adaptive advantages of parental phenotypes.

  1. Microsatellite diversity in sympatric reproductive ecotypes of pacific steelhead (Oncorhynchus my kiss) from the Middle Fork Eel River, California

    USGS Publications Warehouse

    Nielsen, J.L.; Fountain, M.C.

    1999-01-01

    Genetic differentiation between two reproductive ecotypes of anadromous steelhead found in the Middle Fork Eel River in northern California was tested using 16 microsatellite loci. Twelve of these loci showed significant differences in allelic frequency between the two Middle Fork Eel River steelhead populations (Fisher's exact P<0.05). Fisher's combined test for independence also supported significant genetic separation between the two reproductive ecotype (P<0.001). Analysis of molecular variance indicated that only 1% of the overall microsatellite allelic variation contributed to differences between summer- and winter-run steelhead in the Middle Fork Eel River. Variation found among individuals within the two runs equaled 18.2%. Analyses showed less genetic distance between the two populations of steelhead in the Middle Fork Eel River than in comparisons made with geographically proximate coastal winter-run fish. Divergence time based on genetic distance for the two within-basin reproductive ecotypes was estimated to be 16,000-28,000 years ago. Copyright ?? Munksgaanl 1999.

  2. Steelhead Supplementation in Idaho Rivers, 1993-1999 Summary Report.

    SciTech Connect

    Byrne, Alan

    2001-02-01

    The Steelhead Supplementation Study has conducted field experiments since 1993 that assess the ability of hatchery stocks to reestablish natural populations. We have stocked hatchery adult steelhead Oncorhynchus mykiss trapped at Sawtooth Fish Hatchery in Beaver Creek yearly and Frenchman creeks when enough fish were available. We stocked Dworshak Hatchery stock fingerlings in the South Fork Red River from 1993 to 1996 and smolts in Red River from 1996 to 1999. Although results from all experiments are not complete, preliminary findings indicate that these hatchery stocks will not reestablish natural steelhead populations. We focused most of our effort on monitoring and evaluating wild steelhead stocks. We operated a temporary weir to estimate the wild steelhead escapement in Fish Creek, a tributary of the Lochsa River. We snorkeled streams to monitor juvenile steelhead abundance, captured and tagged steelhead with Passive Integrated Transponder (PIT) tags, and recorded stream temperatures in the Clearwater and Salmon River drainages. We operated screw traps in five to ten streams each year. We have documented growth rates in Fish and Gedney creeks, age of parr in Fish Creek, Gedney Creek, Lick Creek, and Rapid River, and documented parr and smolt migration characteristics. This report summarizes our effort during the years 1993 to 1999.

  3. Life history diversity in Klamath River steelhead

    USGS Publications Warehouse

    Hodge, Brian W.; Wilzbach, Peggy; Duffy, Walter G. G.; Quinones, Rebecca M.; Hobbs, James A.

    2016-01-01

    Oncorhynchus mykiss exhibits a vast array of life histories, which increases its likelihood of persistence by spreading risk of extirpation among different pathways. The Klamath River basin (California–Oregon) provides a particularly interesting backdrop for the study of life history diversity in O. mykiss, in part because the river is slated for a historic and potentially influential dam removal and habitat recolonization project. We used scale and otolith strontium isotope (87Sr/86Sr) analyses to characterize life history diversity in wildO. mykiss from the lower Klamath River basin. We also determined maternal origin (anadromous or nonanadromous) and migratory history (anadromous or nonanadromous) of O. mykiss and compared length and fecundity at age between anadromous (steelhead) and nonanadromous (Rainbow Trout) phenotypes of O. mykiss. We identified a total of 38 life history categories at maturity, which differed in duration of freshwater and ocean rearing, age at maturation, and incidence of repeat spawning. Approximately 10% of adult fish sampled were nonanadromous. Rainbow Trout generally grew faster in freshwater than juvenile steelhead; however, ocean growth afforded adult steelhead greater length and fecundity than adult Rainbow Trout. Although 75% of individuals followed the migratory path of their mother, steelhead produced nonanadromous progeny and Rainbow Trout produced anadromous progeny. Overall, we observed a highly diverse array of life histories among Klamath River O. mykiss. While this diversity should increase population resilience, recent declines in the abundance of Klamath River steelhead suggest that life history diversity alone is not sufficient to stabilize a population. Our finding that steelhead and Rainbow Trout give rise to progeny of the alternate form (1) suggests that dam removal might lead to a facultatively anadromous O. mykiss population in the upper basin and (2) raises the question of whether both forms of

  4. Colonization of steelhead in a natal stream after barrier removal

    USGS Publications Warehouse

    Weigel, Dana E.; Connolly, Patrick J.; Martens, Kyle D.; Powell, Madison S.

    2013-01-01

    Colonization of vacant habitats is an important process for supporting the long-term persistence of populations and species. We used a before–after experimental design to follow the process of colonization by steelhead Oncorhynchus mykiss (anadromous Rainbow Trout) at six monitoring sites in a natal stream, Beaver Creek, after the modification or removal of numerous stream passage barriers. Juvenile O. mykiss were collected at monitoring sites by using a backpack electrofisher. Passive integrated transponder tags and instream tag reading stations were used in combination with 16 microsatellite markers to determine the source, extent, and success of migrant O. mykiss after implementation of the barrier removal projects. Steelhead migrated into the study area during the first spawning season after passage was established. Hatchery steelhead, although comprising more than 80% of the adult returns to the Methow River basin, constituted a small proportion (23%) of the adult O. mykiss colonizing the study area. Adult steelhead and fluvial Rainbow Trout entered the stream during the first spawning season after barrier removal and were passing the uppermost tag reader (12 km upstream from the mouth) 3–4 years later. Parr that were tagged in Beaver Creek returned as adults, indicating establishment of the anadromous life history in the study area. Population genetic measures at the lower two monitoring sites (lower 4 km of Beaver Creek) significantly changed within one generation (4–5 years). Colonization and expansion of steelhead occurred more slowly than expected due to the low number of adults migrating into the study area.

  5. Radio-Tracking Studies of Adult Chinook Salmon and Steelhead to Determine the Effect of ''Zero'' River Flow During Water Storage at Little Goose Dam on the Lower Snake River, Final Report of Research.

    SciTech Connect

    Liscom, Kenneth

    1985-09-01

    Allowable instantaneous minimum river flows are established in the Columbia and Snake Rivers to ensure safe passage of anadromous fish during their migration to the spawning grounds. However, water storage during periods of low power demands (at night and on weekends) would be beneficial to the power producers. This storage procedure is called ''zero'' river flow and is now permitted on a limited basis when there are few if any actively migrating anadromous fish present in the river system. Requests were made to extend ''zero'' river flow into periods when anadromous fish were actively migrating and a study was initiated. Radio-tracking studies were conducted on the Snake River between Lower Monumental and Little Goose Dams to determine the effect of ''zero'' river flow on the migration of adult chinook salmon, Oncorhynchus tshawytscha, and steelhead, Salmo gairdneri. From July through September, 1981, a total of 258 steelhead and 32 chinook salmon were radio-tagged. The rate of migration was used to determine differences between test and control fish and a gamma distribution model was used to describe the migration rate for radio-tagged fish. Estimates of the parameters of the model were used to statistically compare ''zero'' flow and normal river flow conditions for the radio-tagged fish. The results show that the ''zero'' flow condition delays the migration of adult chinook salmon and steelhead; therefore, extended periods of ''zero'' flow to store water are not recommended when fish are actively migrating in the river system. 16 refs., 5 figs., 9 tabs.

  6. Fatty-acid profiles of white muscle and liver in stream-maturing steelhead trout Oncorhynchus mykiss from early migration to kelt emigration.

    PubMed

    Penney, Z L; Moffitt, C M

    2015-01-01

    The profiles of specific fatty acids (FA) in white muscle and liver of fasting steelhead trout Oncorhynchus mykiss were evaluated at three periods during their prespawning migration and at kelt emigration in the Snake-Columbia River of Washington, Oregon and Idaho, to improve the understanding of energy change. Twenty-seven FAs were identified; depletion of 10 of these was positively correlated in liver and white muscle of prespawning O. mykiss. To observe relative changes in FA content more accurately over sampling intervals, the lipid fraction of tissues was used to normalize the quantity of individual FA to an equivalent tissue wet mass. Saturated and monounsaturated FAs were depleted between upstream migration in September and kelt emigration in June, whereas polyunsaturated FAs were more conserved. Liver was depleted of FAs more rapidly than muscle. Three FAs were detected across all sampling intervals: 16:0, 18:1 and 22:6n3, which are probably structurally important to membranes. When structurally important FAs of O. mykiss are depleted to provide energy, physiological performance and survival may be affected. PMID:25424636

  7. Fatty-acid profiles of white muscle and liver in stream-maturing steelhead trout Oncorhynchus mykiss from early migration to kelt emigration

    USGS Publications Warehouse

    Penney, Zachary L.; Moffitt, Christine M.

    2015-01-01

    The profiles of specific fatty acids (FA) in white muscle and liver of fasting steelhead troutOncorhynchus mykiss were evaluated at three periods during their prespawning migration and at kelt emigration in the Snake–Columbia River of Washington, Oregon and Idaho, to improve the understanding of energy change. Twenty-seven FAs were identified; depletion of 10 of these was positively correlated in liver and white muscle of prespawning O. mykiss. To observe relative changes in FA content more accurately over sampling intervals, the lipid fraction of tissues was used to normalize the quantity of individual FA to an equivalent tissue wet mass. Saturated and monounsaturated FAs were depleted between upstream migration in September and kelt emigration in June, whereas polyunsaturated FAs were more conserved. Liver was depleted of FAs more rapidly than muscle. Three FAs were detected across all sampling intervals: 16:0, 18:1 and 22:6n3, which are probably structurally important to membranes. When structurally important FAs of O. mykiss are depleted to provide energy, physiological performance and survival may be affected.

  8. Novel molecular markers differentiate Oncorhynchus mykiss (rainbow trout and steelhead) and the O. clarki (cutthroat trout) subspecies

    USGS Publications Warehouse

    Ostberg, C.O.; Rodriguez, R.J.

    2002-01-01

    A suite of 26 PCR-based markers was developed that differentiates rainbow (Oncorhynchus mykiss) and coastal cutthroat trout (O. clarki clarki). The markers also differentiated rainbow from other cutthroat trout subspecies (O. clarki), and several of the markers differentiated between cutthroat trout subspecies. This system has numerous positive attributes, including: nonlethal sampling, high species-specificity and products that are easily identified and scored using agarose gel electrophoresis. The methodology described for developing the markers can be applied to virtually any system in which numerous markers are desired for identifying or differentiating species or subspecies.

  9. Influence of a Weak Field of Pulsed DC Electricity on the Behavior and Incidence of Injury in Adult Steelhead and Pacific Lamprey, Final Report.

    SciTech Connect

    Mesa, Matthew

    2009-02-13

    Predation by pinnipeds, such as California sea lions Zalophus californianus, Pacific harbor seals Phoca vitulina, and Stellar sea lions Eumetopias jubatus on adult Pacific salmon Oncorhynchus spp in the lower Columbia River has become a serious concern for fishery managers trying to conserve and restore runs of threatened and endangered fish. As a result, Smith-Root, Incorporated (SRI; Vancouver, Washington), manufacturers of electrofishing and closely-related equipment, proposed a project to evaluate the potential of an electrical barrier to deter marine mammals and reduce the amount of predation on adult salmonids (SRI 2007). The objectives of their work were to develop, deploy, and evaluate a passive, integrated sonar and electric barrier that would selectively inhibit the upstream movements of marine mammals and reduce predation, but would not injure pinnipeds or impact anadromous fish migrations. However, before such a device could be deployed in the field, concerns by regional fishery managers about the potential effects of such a device on the migratory behavior of Pacific salmon, steelhead O. mykiss, Pacific lampreys Entoshpenus tridentata, and white sturgeon Acipenser transmontanus, needed to be addressed. In this report, we describe the results of laboratory research designed to evaluate the effects of prototype electric barriers on adult steelhead and Pacific lampreys. The effects of electricity on fish have been widely studied and include injury or death (e.g., Sharber and Carothers 1988; Dwyer et al. 2001; Snyder 2003), physiological dysfunction (e.g., Schreck et al. 1976; Mesa and Schreck 1989), and altered behavior (Mesa and Schreck 1989). Much of this work was done to investigate the effects of electrofishing on fish in the wild. Because electrofishing operations would always use more severe electrical settings than those proposed for the pinniped barrier, results from these studies are probably not relevant to the work proposed by SRI. Field

  10. Steelhead trout Oncorhynchus mykiss metabolic rate is affected by dietary Aloe vera inclusion but not by mounting an immune response against formalin-killed Aeromonas salmonicida.

    PubMed

    Zanuzzo, F S; Urbinati, E C; Nash, G W; Gamperl, A K

    2015-07-01

    The oxygen consumption (MO2) of two groups of 10° C acclimated steelhead trout Oncorhynchus mykiss was measured for 72 h after they were given a 100 µl kg(-1) intraperitoneal injection of formalin-killed Aeromonas salmonicida (ASAL) or phosphate-buffered saline (PBS). In addition, plasma cortisol levels were measured in fish from both groups prior to, and 1 and 3 h after, they were given a 30 s net stress. The first group was fed an unaltered commercial diet for 4 weeks, whereas the second group was fed the same diet but with 0·5% (5 g kg(-1) ) Aloe vera powder added; A. vera has potential as an immunostimulant for use in aquaculture, but its effects on basal and acute phase response (APR)-related metabolic expenditures and stress physiology, are unknown. Injection of ASAL v. PBS had no measurable effect on the MO2 of O. mykiss indicating that the APR in this species is not associated with any net increase in energy expenditure. In contrast, incorporating 0·5% A. vera powder into the feed decreased routine metabolic rate by c. 8% in both injection groups and standard metabolic rate in the ASAL-injected group (by c. 4 mg O2 kg(-1) h(-1) ; 5%). Aloe vera fed fish had resting cortisol levels that were approximately half of those in fish on the commercial diet (c. 2·5 v. 5·0 ng ml(-1) ), but neither this difference nor those post-stress reached statistical significance (P > 0·05). PMID:26010230

  11. Indirect effects of impoundment on migrating fish: temperature gradients in fish ladders slow dam passage by adult Chinook salmon and steelhead.

    PubMed

    Caudill, Christopher C; Keefer, Matthew L; Clabough, Tami S; Naughton, George P; Burke, Brian J; Peery, Christopher A

    2013-01-01

    Thermal layering in reservoirs upstream from hydroelectric dams can create temperature gradients in fishways used by upstream migrating adults. In the Snake River, Washington, federally-protected adult salmonids (Oncorhynchus spp.) often encounter relatively cool water in dam tailraces and lower ladder sections and warmer water in the upstream portions of ladders. Using radiotelemetry, we examined relationships between fish passage behavior and the temperature difference between the top and bottom of ladders (∆T) at four dams over four years. Some spring Chinook salmon (O. tshawytscha) experienced ∆T ≥ 0.5 °C. Many summer and fall Chinook salmon and summer steelhead (O. mykiss) experienced ∆T ≥ 1.0 °C, and some individuals encountered ΔT > 4.0°C. As ΔT increased, migrants were consistently more likely to move down fish ladders and exit into dam tailraces, resulting in upstream passage delays that ranged from hours to days. Fish body temperatures equilibrated to ladder temperatures and often exceeded 20°C, indicating potential negative physiological and fitness effects. Collectively, the results suggest that gradients in fishway water temperatures present a migration obstacle to many anadromous migrants. Unfavorable temperature gradients may be common at reservoir-fed fish passage facilities, especially those with seasonal thermal layering or stratification. Understanding and managing thermal heterogeneity at such sites may be important for ensuring efficient upstream passage and minimizing stress for migratory, temperature-sensitive species. PMID:24392020

  12. Indirect Effects of Impoundment on Migrating Fish: Temperature Gradients in Fish Ladders Slow Dam Passage by Adult Chinook Salmon and Steelhead

    PubMed Central

    Caudill, Christopher C.; Keefer, Matthew L.; Clabough, Tami S.; Naughton, George P.; Burke, Brian J.; Peery, Christopher A.

    2013-01-01

    Thermal layering in reservoirs upstream from hydroelectric dams can create temperature gradients in fishways used by upstream migrating adults. In the Snake River, Washington, federally-protected adult salmonids (Oncorhynchus spp.) often encounter relatively cool water in dam tailraces and lower ladder sections and warmer water in the upstream portions of ladders. Using radiotelemetry, we examined relationships between fish passage behavior and the temperature difference between the top and bottom of ladders (∆T) at four dams over four years. Some spring Chinook salmon (O. tshawytscha) experienced ∆T ≥ 0.5 °C. Many summer and fall Chinook salmon and summer steelhead (O. mykiss) experienced ∆T ≥ 1.0 °C, and some individuals encountered ΔT > 4.0°C. As ΔT increased, migrants were consistently more likely to move down fish ladders and exit into dam tailraces, resulting in upstream passage delays that ranged from hours to days. Fish body temperatures equilibrated to ladder temperatures and often exceeded 20°C, indicating potential negative physiological and fitness effects. Collectively, the results suggest that gradients in fishway water temperatures present a migration obstacle to many anadromous migrants. Unfavorable temperature gradients may be common at reservoir-fed fish passage facilities, especially those with seasonal thermal layering or stratification. Understanding and managing thermal heterogeneity at such sites may be important for ensuring efficient upstream passage and minimizing stress for migratory, temperature-sensitive species. PMID:24392020

  13. Coupled stream and population dynamics: Modeling the role beaver (Castor canadensis) play in generating juvenile steelhead (Oncorhynchus mykiss) habitat

    NASA Astrophysics Data System (ADS)

    Jordan, C.; Bouwes, N.; Wheaton, J. M.; Pollock, M.

    2013-12-01

    through the dynamics of the co-occurring beaver population. The model allowed to us to ask questions critical for designing restoration strategies based on dam building beaver activity, such as what beaver population growth rate is required to develop and maintain floodplain connectivity in an incised system, or what beaver population size is required to increase juvenile steelhead production? The model was sensitive to several variables including beaver colony size, dams and colony dynamics and site fidelity, and thus highlights further research needs to fill critical information gaps.

  14. Behavior patterns and fates of adult steelhead, Chinook salmon, and coho salmon released into the upper Cowlitz River Basin, 2005–09 and 2012, Washington

    USGS Publications Warehouse

    Kock, Tobias J.; Ekstrom, Brian K.; Liedtke, Theresa L.; Serl, John D.; Kohn, Mike

    2016-01-01

    A multiyear radiotelemetry evaluation was conducted to monitor adult steelhead (Oncorhynchus mykiss), Chinook salmon (O. tshawytscha), and coho salmon (O. kisutch) behavior and movement patterns in the upper Cowlitz River Basin. Volitional passage to this area was eliminated by dam construction in the mid-1960s, and a reintroduction program began in the mid-1990s. Fish are transported around the dams using a trap-and-haul program, and adult release sites are located in Lake Scanewa, the uppermost reservoir in the system, and in the Cowlitz and Cispus Rivers. Our goal was to estimate the proportion of tagged fish that fell back downstream of Cowlitz Falls Dam before the spawning period and to determine the proportion that were present in the Cowlitz and Cispus Rivers during the spawning period. Fallback is important because Cowlitz Falls Dam does not have upstream fish passage, so fish that pass the dam are unable to move back upstream and spawn. A total of 2,051 steelhead and salmon were tagged for the study, which was conducted during 2005–09 and 2012, and 173 (8.4 percent) of these regurgitated their transmitter prior to, or shortly after release. Once these fish were removed from the dataset, the final number of fish that was monitored totaled 1,878 fish, including 647 steelhead, 770 Chinook salmon, and 461 coho salmon.Hatchery-origin (HOR) and natural-origin (NOR) steelhead, Chinook salmon, and coho salmon behaved differently following release into Lake Scanewa. Detection records showed that the percentage of HOR fish that moved upstream and entered the Cowlitz River or Cispus River after release was relatively low (steelhead = 38 percent; Chinook salmon = 67 percent; coho salmon = 41 percent) compared to NOR fish (steelhead = 84 percent; Chinook salmon = 82 percent; coho salmon = 76 percent). The elapsed time from release to river entry was significantly lower for NOR fish than for HOR fish for all three species. Tagged fish entered the Cowlitz River in

  15. Evaluation of the Reproductive Success of Wild and Hatchery Steelhead in Hatchery and Natural and Hatchery Environments : Annual Report for 2008.

    SciTech Connect

    Quinn, Thomas P.; Seamons, todd; Hauser, Lorenz; Naish, Kerry

    2008-12-05

    This report summarizes the field, laboratory, and analytical work from December 2007 through November 2008 on a research project that investigates interactions and comparative reproductive success of wild and hatchery origin steelhead (Oncorhynchus mykiss) trout in Forks Creek, a tributary of the Willapa River in southwest Washington. First, we continued to successfully sample hatchery and wild (i.e., naturally spawned) adult and wild smolt steelhead at Forks Creek. Second, we revealed microsatellite genotype data for adults and smolts through brood year 2008. Finally, four formal scientific manuscripts were published in 2008 and two are in press, one is in revision and two are in preparations.

  16. EFFECTS OF AIR-SUPERSATURATED WATER ON ADULT SOCKEYE SALMON (ONCORHYNCHUS NERKA)

    EPA Science Inventory

    Adult sockeye salmon (Oncorhynchus nerka) were exposed to air supersaturated water in the laboratory from July 8 to August 13, 1974, approximately the same time period that they are exposed to supersaturated water during their movement through the lower and middle sections of the...

  17. Wild Steelhead Studies, 1993 Annual Report.

    SciTech Connect

    Holubetz, Terry B.

    1995-11-01

    Significant progress was attained in implementing the complex and challenging studies of wild steelhead Oncorhynchus mykiss production in Idaho. Study sites were selected and techniques were developed to collect the needed data in remote wilderness locations. Cursory examination of existing data provides indication that most wild steelhead stocks are under escaped, especially the Group B stocks. Abundance of wild steelhead is generally declining in recent years. The portable weir concept and electronic fish counting developed through this project have been well received by land owners and reviewing governmental agencies with less impact to the land, stream, and fishery resources than conventional permanent weirs.

  18. Protection of Wild Adult Steelhead in Idaho by Adipose Fin Removal: 1984-1985 Annual Report.

    SciTech Connect

    Duke, Rodney C.

    1986-03-01

    All Idaho hatchery-reared steelhead released in the spring of 1985 received an adipose fin clip to differentiate between natural or wild and hatchery, fish, thus allowing for protection of wild fish in the sport harvest. Between 25 September and 14 December 1984, 6,360,542 steelhead trout (Salmo gairdneri) were marked by excising the adipose fin. A total of 10,336 man hours were required to complete the operation. Clip quality and healing, mortality, and adipose fin composition were determined. Quality checks indicated less than 1% of the fish had more than 25% of the fin remaining. Combined mortality at all three hatcheries was 0.3% of the total fish marked. Observed and in vivo test showed complete healing of the excision within 3-4 weeks (observed) and 22 days (in vivo). Bibliographies were compiled for fin regeneration, marked fish survival, hooking mortality, and related catch-and-release studies.

  19. Hydroacoustic Evaluation of Overwintering Summer Steelhead Fallback and Kelt Passage at The Dalles Dam Turbines, Early Spring 2011

    SciTech Connect

    Khan, Fenton; Royer, Ida M.

    2012-02-01

    This report presents the results of an evaluation of overwintering summer steelhead (Oncorhynchus mykiss) fallback and early out-migrating steelhead kelts downstream passage at The Dalles Dam turbines during early spring 2011. The study was conducted by Pacific Northwest National Laboratory (PNNL) for the U.S. Army Corps of Engineers, Portland District (USACE) to investigate whether adult steelhead are passing through turbines during early spring before annual sluiceway operations typically begin. The sluiceway surface flow outlet is the optimal non-turbine route for adult steelhead, although operating the sluiceway reduces hydropower production. This is a follow-up study to similar studies of adult steelhead passage at the sluiceway and turbines we conducted in the fall/winter 2008, early spring 2009, fall/winter 2009, and early spring 2010. The goal of the 2011 study was to characterize adult steelhead passage rates at the turbines while the sluiceway was closed so fisheries managers would have additional information to use in decision-making relative to sluiceway operations. Sluiceway operations were not scheduled to begin until April 10, 2011. However, based on a management decision in late February, sluiceway operations commenced on March 1, 2011. Therefore, this study provided estimates of fish passage rates through the turbines, and not the sluiceway, while the sluiceway was open. The study period was March 1 through April 10, 2011 (41 days total). The study objective was to estimate the number and distribution of adult steelhead and kelt-sized targets passing into turbine units. We obtained fish passage data using fixed-location hydroacoustics with transducers deployed at all 22 main turbine units at The Dalles Dam. Adult steelhead passage through the turbines occurred on 9 days during the study (March 9, 12, 30, and 31 and April 2, 3, 5, 7, and 9). We estimated a total of 215 {+-} 98 (95% confidence interval) adult steelhead targets passed through the

  20. Steelhead Spawning Surveys Near Locke Island, Hanford Reach of the Columbia River

    SciTech Connect

    Geist,; Mueller, RP

    1999-10-19

    In 1997, the National Marine Fisheries Service (NMFS) listed upper Columbia River steelhead trout (Oncorhynchus znykiss) as endangered. This action affected management of land-use activities along and within the Hanford Reach of the Columbia River, which flows through the U.S. Department of Energy (DOE) Hanford Site. Steelhead covered in this listing include all naturally spawned populations of steel-head and their progeny in streams in the Columbia River Basin upstream from the Yakima River to the United States/Canada border. The NMFS has identified a general listing of activities that could potentially result in harm to steelhead (62 FR 43937, August 18, 1997). One of these concerns includes land-use changes resulting in mass wasting or surface erosion. Landslide activity along the White Bluffs on the east ,side of Locke Island has redirected river flow into the island where substantial erosion has occurred. This erosion has exposed important anthropological and archaeological resources that were previously buried on the island. The DOE is working with affected tribes and other agencies to develop a plan for addressing the erosion of Locke Island. As part of this effort, the U.S. Army Corps of Engineers has prepared an assessment of potential alternatives to stabilize the erosion, including a no-action alternative. Steelhead historically spawned in the vicinity of Locke Island, but recent information on the occurrence of steelhead spawning or availability of spawning habitat was lacking. Therefore, the purpose of this study was to determine if steelhead spawned in the vicinity of Locke Island erosion and to evaluate the composition of substrate in the affected area. Surveys to document the occurrence of steelheads redds were conducted in Spring 1999. The surveys were conducted from the air as well as with the use of an underwater video camera. Neither aerial nor underwater surveys documented steelhead spawning within the survey area. Habitat surveys were

  1. Evaluation of the behavior and movement of adult summer steelhead in the lower Cowlitz River, Washington, following collection and release, 2013-2014

    USGS Publications Warehouse

    Kock, Tobias J.; Liedtke, Theresa L.; Ekstrom, Brian K.; Gleizes, Chris; Dammers, Wolf

    2014-01-01

    Summer steelhead (Oncorhynchus mykiss) produced by a hatchery on the lower Cowlitz River, Washington, support a popular sport fishery during June–September each year. Many of these fish return to the Cowlitz Salmon Hatchery and are held until they are spawned in December. In the past, fishery managers have released some of the steelhead that return to the hatchery at downstream release sites (hereafter referred to as “recycled steelhead”) to increase angling opportunity. The recycling of summer steelhead is a potential use of hatchery fish that can benefit anglers in the lower Cowlitz River, provided these fish are harvested or return to the hatchery. However, recycled steelhead that are not removed from the river could compete against or spawn with wild winter steelhead, which would be a negative consequence of recycling. The Washington Department of Fish and Wildlife (WDFW) conducted an evaluation during 1998 and recycled 632 summer steelhead. They determined that 55 percent of the recycled steelhead returned to the hatchery and 15 percent of the fish were harvested by anglers. The remaining 30 percent of recycled fish were not known to have been removed from the river. Recycling has not occurred in recent years because definitive studies have not been conducted to determine the fate of the fish that remain in the lower Cowlitz River after being recycled. The U.S. Geological Survey and WDFW conducted a 2-year study during 2012–2014 to quantify recycled steelhead that (1) returned to the hatchery, (2) were captured by anglers, or (3) remained in the river. All recycled steelhead were marked with a Floy® tag and opercle punch, and 20 percent of the recycled fish were radio-tagged to determine post-release behavior and movement patterns, and to describe locations of tagged fish that remained in the river during the spawning period. During 2012–2013, we recycled 549 steelhead and determined that 50 percent of the fish returned to the hatchery, 18 percent

  2. Intensive Evaluation and Monitoring of Chinook Salmon and Steelhead Trout Production, Crooked River and Upper Salmon River Sites, 1992 Annual Report.

    SciTech Connect

    Kiefer, Russell B.; Lockhart, Jerald N.

    1994-12-01

    The purpose of this intensive monitoring project is to determine the number of returning chinook salmon Oncorhynchus tshawytscha and steelhead trout 0. mykiss adults necessary to achieve optimal smolt production, and develop mitigation accounting based on increases in smolt production. Two locations in Idaho are being intensively studied to meet these objectives. Information from this research will be applied to parr monitoring streams statewide to develop escapement objectives and determine success of habitat enhancement projects.

  3. Yakima River Radio-Telemetry Study: Steelhead, 1989-1993.

    SciTech Connect

    Hockersmith, Eric

    1995-01-01

    A 4-year radio-telemetry study was made of steelhead in the Yakima River basin, with the objectives of determining the run timing, passage patterns at irrigation diversion dams, and morphometric characteristics of different Yakima basin steelhead substocks and determining where and when the substocks become separated; evaluating adult steelhead passage at Yakima River basin diversion dams; determining steelhead migration , temporal distribution, and habitat utilization in the Yakima River basin; identifying spawning distribution and timing of steelhead; and determining the amount and cause of pre-spawning mortality of radio-tagged steelhead. Recommendations are given.

  4. Successful mitigation of viral disease based on a delayed exposure rearing strategy at a large-scale steelhead trout conservation hatchery

    USGS Publications Warehouse

    Breyta, R.; Samson, Corie; Blair, Marilyn; Black, Allison; Kurath, Gael

    2015-01-01

    In 2009, the largest steelhead trout conservation hatchery in the state of Idaho, Dworshak National Fish Hatchery (NFH), lost over 50% of the juvenile steelhead trout (Oncorhynchus mykiss) population being reared for release. The causative agent of this high mortality was the viral pathogen infectious hematopoietic necrosis virus (IHNV). This was neither the first nor the worst epidemic of IHNV to occur at the hatchery, but it was the worst in over a decade. Genetic analysis of IHNV isolates taken from juveniles suffering epidemic IHN disease in 2009 revealed that the virus was of the M group of IHNV viruses, known to have high virulence for trout. The water supply for steelhead trout rearing at Dworshak NFH is untreated water taken directly from the Clearwater River. Further genetic analysis of IHNV isolates from adults spawned in 2009 indicated that adult steelhead trout in the river (in the hatchery water supply) were the most probable transmission source for the epidemic IHN disease in the juvenile fish. Previously, Dworshak NFH had been able to gain access to reservoir water from behind the Dworshak Dam for nursery egg incubation and the earliest stage of fry rearing, which nearly eliminated incidence of IHN disease in that stage of rearing. Additionally, the nearby Clearwater State Fish Hatchery (SFH), which operates entirely with reservoir water, has never had a case of IHN disease in juvenile steelhead trout. Therefore, staff at Dworshak NFH sought and obtained access to a limited supply of reservoir water for the first few months of outdoor rearing of juvenile steelhead trout, beginning in 2010. This strategy delayed the exposure of juvenile steelhead trout to river water for several months. The effects of this program change were: drastic reduction in IHN disease in juvenile steelhead trout; interruption in the transmission of highly virulent M group IHNV from adult steelhead trout; no interruption in the transmission of low virulent U group IHNV from

  5. Detection of Renibacterium salmoninarum antigen in migrating adult chum salmon (Oncorhynchus keta) in Japan.

    PubMed

    Sakai, M; Atsuta, S; Kobayashi, M

    1992-01-01

    Renibacterium salmoninarum antigen was detected in the kidney of migrating chum salmon (Oncorhynchus keta) using the indirect dot blot assay and indirect fluorescent antibody test. The adult chum salmon had migrated into a bay in which cultured coho salmon infected with R. salmoninarum were present. Antigen was detected in 5% of the chum salmon although they did not have clinical signs of bacterial kidney disease (BKD). This report describes the first case of R. salmoninarum antigen detection among wild chum salmon populations in eastern Asia. PMID:1548789

  6. Emergence of MD type infectious hematopoietic necrosis virus in Washington State coastal steelhead trout

    USGS Publications Warehouse

    Breyta, Rachel; Jones, Amelia; Stewart, Bruce; Brunson, Ray; Thomas, Joan; Kerwin, John; Bertolini, Jim; Mumford, Sonia; Patterson, Chris; Kurath, Gael

    2013-01-01

    Infectious hematopoietic necrosis virus (IHNV) occurs in North America as 3 major phylogenetic groups designated U, M, and L. In coastal Washington State, IHNV has historically consisted of U genogroup viruses found predominantly in sockeye salmon Oncorhynchus nerka. M genogroup IHNV, which has host-specific virulence for rainbow and steelhead trout O. mykiss, was detected only once in coastal Washington prior to 2007, in an epidemic among juvenile steelhead trout in 1997. Beginning in 2007 and continuing through 2011, there were 8 IHNV epidemics in juvenile steelhead trout, involving 7 different fish culture facilities in 4 separate watersheds. During the same time period, IHNV was also detected in asymptomatic adult steelhead trout from 6 coastal watersheds. Genetic typing of 283 recent virus isolates from coastal Washington revealed that the great majority were in the M genogroup of IHNV and that there were 2 distinct waves of viral emergence between the years 2007 and 2011. IHNV type mG110M was dominant in coastal steelhead trout during 2007 to 2009, and type mG139M was dominant between 2010 and 2011. Phylogenetic analysis of viral isolates indicated that all coastal M genogroup viruses detected in 1997 and 2007 to 2011 were part of the MD subgroup and that several novel genetic variants related to the dominant types arose in the coastal sites. Comparison of spatial and temporal incidence of coastal MD viruses with that of the rest of the Pacific Northwest indicated that the likely source of the emergent viruses was Columbia River Basin steelhead trout. 

  7. Emergence of MD type infectious hematopoietic necrosis virus in Washington State coastal steelhead trout.

    PubMed

    Breyta, Rachel; Jones, Amelia; Stewart, Bruce; Brunson, Ray; Thomas, Joan; Kerwin, John; Bertolini, Jim; Mumford, Sonia; Patterson, Chris; Kurath, Gael

    2013-06-13

    Infectious hematopoietic necrosis virus (IHNV) occurs in North America as 3 major phylogenetic groups designated U, M, and L. In coastal Washington State, IHNV has historically consisted of U genogroup viruses found predominantly in sockeye salmon Oncorhynchus nerka. M genogroup IHNV, which has host-specific virulence for rainbow and steelhead trout O. mykiss, was detected only once in coastal Washington prior to 2007, in an epidemic among juvenile steelhead trout in 1997. Beginning in 2007 and continuing through 2011, there were 8 IHNV epidemics in juvenile steelhead trout, involving 7 different fish culture facilities in 4 separate watersheds. During the same time period, IHNV was also detected in asymptomatic adult steelhead trout from 6 coastal watersheds. Genetic typing of 283 recent virus isolates from coastal Washington revealed that the great majority were in the M genogroup of IHNV and that there were 2 distinct waves of viral emergence between the years 2007 and 2011. IHNV type mG110M was dominant in coastal steelhead trout during 2007 to 2009, and type mG139M was dominant between 2010 and 2011. Phylogenetic analysis of viral isolates indicated that all coastal M genogroup viruses detected in 1997 and 2007 to 2011 were part of the MD subgroup and that several novel genetic variants related to the dominant types arose in the coastal sites. Comparison of spatial and temporal incidence of coastal MD viruses with that of the rest of the Pacific Northwest indicated that the likely source of the emergent viruses was Columbia River Basin steelhead trout. PMID:23759556

  8. Using Net Energy Intake models to predict and evaluate the benefits of stream restoration to improve juvenile steelhead (Oncorhynchus mykiss) habitat

    NASA Astrophysics Data System (ADS)

    Bouwes, N.; Wall, C. E.; Wheaton, J. M.; Bennett, S.; Jordan, C.

    2013-12-01

    Stream restoration is often targeted to improve fish habitat. However, predictions or evaluations of habitat or fish population responses to these actions are rarely assessed or more often assumed. Model predictions that describe both physical and biological effects from different types of restorations can help test hypotheses to improve our understanding of fish habitat requirements, especially if restoration is treated as an experiment. In addition, models can help synthesize data to determine project effectiveness to link fish responses to physical habitat responses, promoting a mechanistic understanding that is transferrable to other systems. We are applying a mechanistic model to estimate net energy intake (NEI) potential for juvenile steelhead throughout a stream reach. NEI modeling approaches attempt to describe the quantity of food a fish can ingest at a particular site (as a function of food availability, temperature, and fish size) and the energetic costs of living there (as a function of flow patterns, temperature, and fish size). The collection of NEI estimates can be used to help understand the site's overall energetic profitability for fish and to generate an estimate of carrying capacity. We collected topographic information to create digital elevation models (DEMs) of a stream channel along with drifting invertebrates, temperature, discharge, and substrate type, before and after the addition of large wood in the Asotin watershed. This information was used to create hydraulic models to estimate water velocities and flow direction which were then used to predict delivery rates of drift, swimming costs to fish, and ultimately NEI potential throughout the reach. The model was used to predict restoration benefits based on expected geomorphic responses to large wood. In addition, the model was used to translate modest observed changes in topography from the restoration to increases in NEI and carrying capacity of the stream reach. We believe the NEI

  9. Hydroacoustic Evaluation of Overwintering Summer Steelhead Fallback and Kelt Passage at The Dalles Dam, 2009-2010

    SciTech Connect

    Khan, Fenton; Johnson, Gary E.; Weiland, Mark A.

    2010-07-31

    This report presents the results of an evaluation of overwintering summer steelhead (Oncorhynchus mykiss) fallback and early out-migrating steelhead kelts downstream passage at The Dalles Dam (TDA) sluiceway and turbines during fall/winter 2009 through early spring 2010. The study was conducted by the Pacific Northwest National Laboratory (PNNL) for the U.S. Army Corps of Engineers, Portland District (USACE). The goal of this study was to characterize adult steelhead spatial and temporal distributions and passage rates at the sluiceway and turbines for fisheries managers and engineers to use in decision-making relative to sluiceway operations. The study was from November 1, 2009 to April 10, 2010. The study was divided into three study periods: Period 1, November 1 - December 15, 2009 for a fall/winter sluiceway and turbine study; Period 2, December 16, 2009 - February 28, 2010 for a turbine only study; Period 3, March 1 - April 10, 2010 for a spring sluiceway and turbine study. Sluiceway operations were scheduled to begin on March 1 for this study; however, because of an oil spill cleanup near the sluice outfall, sluiceway operations were delayed until March 8, 2010, therefore the spring study period did not commence until March 8. The study objectives were to (1) estimate the number and distribution of overwintering summer steelhead fallbacks and kelt-sized acoustic targets passing into the sluiceway and turbines at TDA between November 1 and December 15, 2009 and March 1 and April 10, 2010, and (2) estimate the numbers and distribution of adult steelhead and kelt-sized targets passing into turbine units between December 16, 2009 and February 28, 2010. We obtained fish passage data using fixed-location hydroacoustics. For Period 1, overwintering summer steelhead fallback occurred throughout the 45-day study period. A total of 879 {+-} 165 (95% CI) steelhead targets passed through the powerhouse and sluiceway during November 1 to December 15, 2009. Ninety two

  10. Development of a Progeny Marker for Steelhead; A Thesis submitted to Oregon State University.

    SciTech Connect

    Shippentower, Gene E.

    2009-04-15

    This study was undertaken to determine if strontium chloride could be used to create a trans-generational otolith mark in steelhead (Oncorhynchus mykiss). I completed two strontium injection trials and a survey of juvenile steelhead from various steelhead hatcheries. The two trials measured Sr:Ca ratios in otoliths in response to injections and the survey measured the natural variation in Sr:Ca ratios in otoliths of juvenile hatchery steelhead in response to the natural variation. In 2003, adult female Wallowa River, Oregon O. mykiss, were captured at the hatchery and evenly divided between a control group and two treatment groups. These females received an intraperitoneal injection of 1cc/500 g of body weight of a physiologically isotonic solution (0.9% saline) containing concentrations of 0 (control), 1000, or 5000 parts per million (ppm) of strontium chloride hexahydrate (SrCl2* 6H2O). Females were housed in a single outdoor tank until spawned artificially, and a distinct external tag identified each female within each treatment group. In 2004, female steelhead were captured throughout the duration of the adult returns to the Umatilla River basin and injected with 0, 1000, 5000, or 20,000-ppm strontium. In both trials, progeny of fish treated with strontium had significantly higher Sr:Ca ratios in the primordial region of their otoliths as measured using an electron wavelength dispersive microprobe. There was no difference in fertilization rates of eggs and survival rates of fry among treatment groups. Progeny from treated mothers were on average larger than progeny of untreated mothers. The Sr:Ca ratios in otoliths collected from various populations of steelhead were greater than the control values measured in both injections studies. This study suggests that the marking technique works and the utility for such a technique could be used for empirical observations in determining the relative fitness of progeny of adult hatchery origin fish

  11. Innate and adaptive immune responses in migrating spring-run adult chinook salmon, Oncorhynchus tshawytscha

    USGS Publications Warehouse

    Dolan, Brian P.; Fisher, Kathleen M.; Colvin, Michael E.; Benda, Susan E.; Peterson, James T.; Kent, Michael L.; Schreck, Carl B.

    2016-01-01

    Adult Chinook salmon (Oncorhynchus tshawytscha) migrate from salt water to freshwater streams to spawn. Immune responses in migrating adult salmon are thought to diminish in the run up to spawning, though the exact mechanisms for diminished immune responses remain unknown. Here we examine both adaptive and innate immune responses as well as pathogen burdens in migrating adult Chinook salmon in the Upper Willamette River basin. Messenger RNA transcripts encoding antibody heavy chain molecules slightly diminish as a function of time, but are still present even after fish have successfully spawned. In contrast, the innate anti-bacterial effector proteins present in fish plasma rapidly decrease as spawning approaches. Fish also were examined for the presence and severity of eight different pathogens in different organs. While pathogen burden tended to increase during the migration, no specific pathogen signature was associated with diminished immune responses. Transcript levels of the immunosuppressive cytokines IL-10 and TGF beta were measured and did not change during the migration. These results suggest that loss of immune functions in adult migrating salmon are not due to pathogen infection or cytokine-mediated immune suppression, but is rather part of the life history of Chinook salmon likely induced by diminished energy reserves or hormonal changes which accompany spawning.

  12. Innate and adaptive immune responses in migrating spring-run adult chinook salmon, Oncorhynchus tshawytscha.

    PubMed

    Dolan, Brian P; Fisher, Kathleen M; Colvin, Michael E; Benda, Susan E; Peterson, James T; Kent, Michael L; Schreck, Carl B

    2016-01-01

    Adult Chinook salmon (Oncorhynchus tshawytscha) migrate from salt water to freshwater streams to spawn. Immune responses in migrating adult salmon are thought to diminish in the run up to spawning, though the exact mechanisms for diminished immune responses remain unknown. Here we examine both adaptive and innate immune responses as well as pathogen burdens in migrating adult Chinook salmon in the Upper Willamette River basin. Messenger RNA transcripts encoding antibody heavy chain molecules slightly diminish as a function of time, but are still present even after fish have successfully spawned. In contrast, the innate anti-bacterial effector proteins present in fish plasma rapidly decrease as spawning approaches. Fish also were examined for the presence and severity of eight different pathogens in different organs. While pathogen burden tended to increase during the migration, no specific pathogen signature was associated with diminished immune responses. Transcript levels of the immunosuppressive cytokines IL-10 and TGF beta were measured and did not change during the migration. These results suggest that loss of immune functions in adult migrating salmon are not due to pathogen infection or cytokine-mediated immune suppression, but is rather part of the life history of Chinook salmon likely induced by diminished energy reserves or hormonal changes which accompany spawning. PMID:26581919

  13. ADULT COHO SALMON AND STEELHEAD USE OF BOULDER WEIRS IN SOUTHWEST OREGON STREAMS

    EPA Science Inventory

    The placement of log and boulder structures in streams is a common and often effective technique for improving juvenile salmonid rearing habitat and increasing fish densities. Less frequently examined has been the use of these structures by adult salmonids. In 2004, spawner densi...

  14. Hydroacoustic Evaluation of Overwintering Summer Steelhead Fallback and Kelt Passage at The Dalles Dam 2008-2009

    SciTech Connect

    Khan, Fenton; Johnson, Gary E.; Weiland, Mark A.

    2009-09-01

    This report presents the results of an evaluation of overwintering summer steelhead (Oncorhynchus mykiss) fallback and early out-migrating steelhead kelts downstream passage at The Dalles Dam (TDA) sluiceway and turbines during fall/winter 2008 and early spring 2009, respectively. The study was conducted by the Pacific Northwest National Laboratory (PNNL) for the U.S. Army Corps of Engineers, Portland District (USACE). Operating the sluiceway reduces the potential for hydropower production. However, this surface flow outlet may be the optimal non-turbine route for fallbacks in late fall after the sluiceway is typically closed for juvenile fish passage and for overwintering summer steelhead and kelt passage in the early spring before the start of the voluntary spill season. The goal of this study was to characterize adult steelhead spatial and temporal distributions and passage rates at the sluiceway and turbines, and their movements in front of the sluiceway at TDA to inform fisheries managers’ and engineers’ decision-making relative to sluiceway operations. The study periods were from November 1 to December 15, 2008 (45 days) and from March 1 to April 9, 2009 (40 days). The study objectives were to 1) estimate the number and distribution of overwintering summer steelhead fallbacks and kelt-sized acoustic targets passing into the sluiceway and turbines at TDA during the two study periods, respectively, and 2) assess the behavior of these fish in front of sluice entrances. We obtained fish passage data using fixed-location hydroacoustics and fish behavior data using acoustic imaging. For the overwintering summer steelhead, fallback occurred throughout the 45-day study period. We estimated that a total of 1790 ± 250 (95% confidence interval) summer steelhead targets passed through the powerhouse intakes and operating sluices during November 1 to December 15, 2008. Ninety five percent of these fish passed through the sluiceway. Therefore, without the sluiceway as

  15. Identification of steelhead and resident rainbow trout progeny in the Deschutes River, Oregon, revealed with otolith microchemistry

    USGS Publications Warehouse

    Zimmerman, C.E.; Reeves, G.H.

    2002-01-01

    Comparisons of strontium:calcium (Sr:Ca) ratios in otolith primordia and freshwater growth regions were used to identify the progeny of steelhead Oncorhynchus mykiss (anadromous rainbow trout) and resident rainbow trout in the Deschutes River, Oregon. We cultured progeny of known adult steelhead and resident rainbow trout to confirm the relationship between Sr:Ca ratios in otolith primordia and the life history of the maternal parent. The mean (??SD) Sr:Ca ratio was significantly higher in the otolith primordia of the progeny of steelhead (0.001461 ?? 0.00029; n = 100) than in those of the progeny of resident rainbow trout (0.000829 ?? 0.000012; n = 100). We used comparisons of Sr:Ca ratios in the primordia and first-summer growth regions of otoliths to determine the maternal origin of unknown O. mykiss juveniles (n = 272) collected from rearing habitats within the main-stem Deschutes River and tributary rearing habitats and thus to ascertain the relative proportion of each life history morph in each rearing habitat. Resident rainbow trout fry dominated the bi-monthly samples collected from main-stem rearing habitats between May and November 1995. Steelhead fry dominated samples collected from below waterfalls on two tributaries in 1996 and 1998.

  16. Bioenergetic response by steelhead to variation in diet, thermal habitat, and climate in the north Pacific Ocean

    USGS Publications Warehouse

    Atcheson, Margaret E.; Myers, Katherine W.; Beauchamp, David A.; Mantua, Nathan J.

    2012-01-01

    Energetic responses of steelhead Oncorhynchus mykiss to climate-driven changes in marine conditions are expected to affect the species’ ocean distribution, feeding, growth, and survival. With a unique 18-year data series (1991–2008) for steelhead sampled in the open ocean, we simulated interannual variation in prey consumption and growth efficiency of steelhead using a bioenergetics model to evaluate the temperature-dependent growth response of steelhead to past climate events and to estimate growth potential of steelhead under future climate scenarios. Our results showed that annual ocean growth of steelhead is highly variable depending on prey quality, consumption rates, total consumption, and thermal experience. At optimal growing temperatures, steelhead can compensate for a low-energy diet by increasing consumption rates and consuming more prey, if available. Our findings suggest that steelhead have a narrow temperature window in which to achieve optimal growth, which is strongly influenced by climate-driven changes in ocean temperature.

  17. Evaluation and Monitoring of Wild/Natural Steelhead Production, 1995 Annual Report.

    SciTech Connect

    Holubetz, Terry B.; Leth, Brian D. (Idaho Department of Fish and Game, Fisheries Research Section, Boise, ID

    1997-05-01

    Several key study streams in the Salmon River and Clearwater River drainages were snorkeled in the summer of 1995. The current Idaho Department of Fish and Game (IDFG) goal is to maintain a parr density at 70% of the rated carrying capacity. All streams snorkeled are considerably below the current goal (6.4% to 54.3% of goal). Weirs were operated in Chamberlain Creek, West Fork Chamberlain Creek, Running Creek, and Rush Creek during the spring adult steelhead Oncorhynchus mykiss spawning migration. An adult steelhead migration barrier was operated in Rapid River. Adult steelhead escapements in all but Rapid River are at critically low levels. An adult salmon 0. sp. weir was operated in Running Creek using a new passive electronic/video counting facility. Five adult chinook salmon 0. fshawyfscha were captured on video as they passed the counting facility. A video record of all resident fish in excess of 10 to 12 in was also obtained. The video system performed adequately in most circumstances. Additional testing and modification will continue during the 1996 salmon spawning migration. An upstream migration barrier was operated in Rapid River during the salmon spawning migration. Four adult male salmon were passed above the barrier; no females were captured or passed above the barrier. Rotary screw traps were operated in Running Creek and Rapid River during the spring and fall to monitor the juvenile steelhead and salmon downstream migration. Migration timing in Running Creek indicates that the majority of smolt size fish moved downstream out of Running Creek in the fall and few smolt size fish left Running Creek in the spring. Migration timing at Rapid River indicates a more equal distribution of the smolt size fish moving downstream out of Rapid River in the spring. Juvenile steelhead were PIT-tagged in Chamberlain Creek, Running Creek and Rapid River during the summer and fall of 1995. Detections at the lower Snake and Columbia rivers from the 1994 tagging

  18. Lynch Ferry Hatchery - Summer Steelhead, Final Report

    SciTech Connect

    Watson, M.

    1996-05-01

    This report presents the findings of the independent audit of the Lyons Ferry Hatchery (Summer Steelhead). Lyons Ferry Hatchery is located downstream of the confluence of the Palouse and Snake rivers, about 7 miles west of Starbuck, Washington. The hatchery is used for adult collection of fall chinook and summer steelhead, egg incubation of fall chinook, spring chinook, steelhead, and rainbow trout and rearing of fall chinook, spring chinook, summer steelhead, and rainbow trout. The audit was conducted in April 1996 as part of a two-year effort that will include 67 hatcheries and satellite facilities located on the Columbia and Snake River system in Idaho, Oregon, and Washington. The hatchery operating agencies include the US Fish and Wildlife Service, Idaho Department of Fish and Game, Oregon Department of Fish and Wildlife, and Washington Department of Fish and Wildlife.

  19. Seasonal variation in habitat use of juvenile Steelhead in a tributary of Lake Ontario

    USGS Publications Warehouse

    Studdert, Emily W.; Johnson, James H.

    2015-01-01

    We examined seasonal-habitat use by subyearling and yearling Oncorhynchus mykiss (Rainbow Trout or Steelhead) in Trout Brook, a tributary of the Salmon River, NY. We determined daytime fish-habitat use and available habitat during August and October of the same year and observed differences in habitat selection among year classes. Water depth and cover played the greatest role in Steelhead habitat use. During summer and autumn, we found yearling Steelhead in areas with deeper water and more cover than where we observed subyearling Steelhead. Both year classes sought out areas with abundant cover during both seasons; this habitat was limited within the stream reach. Subyearling Steelhead were associated with more cover during autumn, even though available cover within the stream reach was greater during summer. Principal component analysis showed that variation in seasonal-habitat use was most pronounced for subyearling Steelhead and that yearling Steelhead were more selective in their habitat use than subyearling Steelhead. The results of this study contribute to a greater understanding of how this popular sportfish is adapting to a new environment and the factors that may limit juvenile Steelhead survival. Our findings provide valuable new insights into the seasonal-habitat requirements of subyearling and yearling Steelhead that can be used by fisheries managers to enhance and protect the species throughout the Great Lakes region.

  20. Steelhead Supplementation Studies; Steelhead Supplementation in Idaho Rivers, Annual Report 2002.

    SciTech Connect

    Byrne, Alan

    2003-03-01

    The Steelhead Supplementation Study (SSS) has two broad objectives: (1) investigate the feasibility of supplementing depressed wild and natural steelhead populations using hatchery populations, and (2) describe the basic life history and genetic characteristics of wild and natural steelhead populations in the Salmon and Clearwater Basins. Idaho Department of Fish and Game (IDFG) personnel stocked adult steelhead from Sawtooth Fish Hatchery into Frenchman and Beaver creeks and estimated the number of age-1 parr produced from the outplants since 1993. On May 2, 2002, both Beaver and Frenchman creeks were stocked with hatchery adult steelhead. A SSS crew snorkeled the creeks in August 2002 to estimate the abundance of age-1 parr from brood year (BY) 2001. I estimated that the yield of age-1 parr per female stocked in 2001 was 7.3 and 6.7 in Beaver and Frenchman creeks, respectively. SSS crews stocked Dworshak hatchery stock fingerlings and smolts from 1993 to 1999 in the Red River drainage to assess which life stage produces more progeny when the adults return to spawn. In 2002, Clearwater Fish Hatchery personnel operated the Red River weir to trap adults that returned from these stockings. Twelve PIT-tagged adults from the smolt releases and one PIT-tagged adult from fingerling releases were detected during their migration up the mainstem Columbia and Snake rivers, but none from either group were caught at the weir. The primary focus of the study has been monitoring and collecting life history information from wild steelhead populations. An adult weir has been operated annually since 1992 in Fish Creek, a tributary of the Lochsa River. The weir was damaged by a rain-on-snow event in April 2002 and although the weir remained intact, some adults were able to swim undetected through the weir. Despite damage to the weir, trap tenders captured 167 adult steelhead, the most fish since 1993. The maximum likelihood estimate of adult steelhead escapement was 242. A screw trap

  1. Spring Outmigration of Wild and Hatchery Chinook Salmon and Steelhead Trout Smolts from the Imnaha River; 1994 Annual Report.

    SciTech Connect

    Ashe, Becky L.; Miller, Alan C.; Kucera, Paul A.

    1995-01-01

    In 1994, the Nez Perce Tribe began a smolt monitoring study on the Imnaha River in cooperation with the Fish Passage Center (FPC). A rotary screw trap was used to collect emigrating wild and hatchery chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) smolts from March 1 to June 15, 1994. We PIT tagged and released 956 wild chinook salmon, 661 hatchery chinook salmon, 1,432 wild steelhead trout and 2,029 hatchery steelhead trout. Cumulative interrogation rates at mainstem Snake and Columbia River dams were 62.2% for wild chinook salmon, 45.2% for hatchery chinook salmon, 51.3% for wild steelhead trout, and 34.3% for hatchery steelhead trout.

  2. Spring Outmigration of Wild and Hatchery Chinook Salmon and Steelhead Trout Smolts from the Imnaha River, Oregon; 1996 Annual Report.

    SciTech Connect

    Blenden, Michael L.; Rocklage, Stephen J.; Kucera, Paul A.

    1997-04-01

    For the third consecutive year, the Nez Perce Tribe, in conjunction with the Fish Passage Center, participated in the smolt monitoring program in the Imnaha River. A rotary screw trap was used to collect emigrating wild and hatchery chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) smolts from February 23 to June 24, 1996. A total of 1,797 wild chinook salmon, 11,896 hatchery chinook salmon, 3,786 wild steelhead trout, and 31,094 hatchery steelhead trout smolts were captured during outmigration studies on the Imnaha River in 1996. Mortality associated with trapping, handling and tagging was low, being 1.4% for wild chinook, 0.18% for hatchery chinook, 0.21% for wild steelhead and 0.28% for hatchery steelhead trout smolts.

  3. A comparison of the survival and migratory behavior of hatchery-reared and naturally reared steelhead smolts in the Alsea river and estuary, Oregon, using acoustic telemetry

    EPA Science Inventory

    We tracked three groups of steelhead Oncorhynchus mykiss smolts implanted with acoustic transmitters to determine whether the degree of hatchery domestication or the juvenile rearing environment (hatchery raceway versus natural stream) influenced migration timing and survival in ...

  4. Productivity of Spring Chinook Salmon and Summer Steelhead in the John Day River Basin, 2008 Annual Technical Report.

    SciTech Connect

    Wilson, Wayne H.; Schricker, Jaym'e; Ruzychi, James R.

    2009-02-13

    The John Day River subbasin supports one of the last remaining intact wild populations of spring Chinook salmon and summer steelhead in the Columbia River Basin. These populations remain depressed relative to historic levels and limited information is available for steelhead life history. Numerous habitat protection and rehabilitation projects have been implemented in the basin to improve salmonid freshwater production and survival. However, these projects often lack effectiveness monitoring. While our monitoring efforts outlined here will not specifically measure the effectiveness of any particular project, they will provide much needed programmatic or watershed (status and trend) information to help evaluate project-specific effectiveness monitoring efforts as well as meet some data needs as index stocks. Our continued monitoring efforts to estimate salmonid smolt abundance, age structure, SAR, smolts/redd, freshwater habitat use, and distribution of critical life states will enable managers to assess the long-term effectiveness of habitat projects and to differentiate freshwater and ocean survival. Because Columbia Basin managers have identified the John Day subbasin spring Chinook population as an index population for assessing the effects of alternative future management actions on salmon stocks in the Columbia Basin (Schaller et al. 1999) we continue our ongoing studies. This project is high priority based on the level of emphasis by the NWPPC Fish and Wildlife Program, Independent Scientific Advisory Board (ISAB), Independent Scientific Review Panel (ISRP), NOAA National Marine Fisheries Service (NMFS), and the Oregon Plan for Salmon and Watersheds (OWEB). Each of these groups have placed priority on monitoring and evaluation to provide the real-time data to guide restoration and adaptive management in the region. The objective is to estimate smolt-to-adult survival rates (SAR) and out-migrant abundance for spring Chinook Oncorhynchus tshawytscha and summer

  5. Trapping and Transportation of Adult and Juvenile Salmon in the Lower Umatilla River in Northeast Oregon: Umatilla River Basin Trap and Haul Program, October 1994-September 1995.

    SciTech Connect

    Zimmerman, Brian C.; Duke, Bill B.

    1995-09-01

    Threemile Falls Dam (Threemile Dam), located near the town of Umatilla, is the major collection and counting point for adult salmonids returning to the Umatilla River. Returning salmon and steelhead were collected at Threemile Dam from August 26, 1994 to June 27, 1995. A total of 1,531 summer steelhead (Oncorhynchus mykiss); 688 adult, 236 jack, and 368 subjack fall chinook (O. tshawvtscha); 984 adult and 62 jack coho (O. kisutch) ; and 388 adult and 108 jack spring chinook (O. tshawvtscha) were collected. All fish were trapped at the east bank facility. Of the fish collected, 971 summer steelhead; 581 adult and 27 jack fall chinook; 500 adult and 22 jack coho; and 363 adult and 61 jack spring chinook were hauled upstream from Threemile Dam. There were also 373 summer steelhead; 12 adult, 186 jack and 317 subjack fall chinook; 379 adult and 32 jack coho; and 15 adult and one jack spring chinook released at Threemile Dam. In addition, 154 summer steelhead were hauled to Bonifer and Minthorn for brood. The Westland Canal facility, located near the town of Echo, is the major collection point for outmigrating juvenile salmonids and steelhead kelts. The facility operated for a total of 179 days between December 2, 1994 and July 19, 1995. During that period, fish were bypassed back to the river 137 days and were trapped 42 days. Three steelhead kelts and an estimated 1,560 pounds of juvenile fish were transported from the Westland Canal trap to the Umatilla River boat ramp at rivermile 0.5. Approximately 98% of the fish transported this year were salmonids. The Threemile Dam west bank juvenile bypass began operating March 25, 1995 and was closed on June 16, 1995. The juvenile trap was operated by Oregon Department of Fish and Wildlife research personnel from April 1, 1995 through the summer to monitor juvenile outmigration.

  6. Trapping and Transportation of Adult and Juvenile Salmon in the Lower Umatilla River in Northeast Oregon, 1996-1997 : Umatilla River Basin Trap and Haul Program : Annual Progress Report, October 1996-September 1997.

    SciTech Connect

    Zimmerman, Brian C.; Duke, Bill B.

    1997-12-01

    Threemile Falls Dam (Threemile Dam), located near the town of Umatilla, is the major collection and counting point for adult salmonids returning to the Umatilla River. Returning salmon and steelhead were collected at Threemile Dam from August 30, 1996 to August 26, 1997. A total of 2,477 summer steelhead (Oncorhynchus mykiss); 646 adult, 80 jack, and 606 subjack fall chinook (O. tshawytscha); 618 adult and 24 jack coho (O. kisutch); and 2,194 adult and four jack spring chinook (O. tshawytscha) were collected. All fish were trapped at the east bank facility. Of the fish collected, 22 summer steelhead; 18 adult and two jack fall chinook; five adult coho; and 407 adult and three jack spring chinook were hauled upstream from Threemile Dam. There were 2,245 summer steelhead; 70 adult, 51 jack and 520 subjack fall chinook; 593 adult and 24 jack coho; and 1,130 adult spring chinook released at Threemile Dam I In addition, 110 summer steelhead; 551 adult and 25 jack fall chinook; and 600 adult spring chinook were collected for broodstock. The Westland Canal juvenile facility (Westland), located near the town of Echo at rivermile (RM) 27, is the major collection point for outmigrating juvenile salmonids and steelhead kelts, The canal was open for a total of 210 days between December 16, 1996 and July 30, 1997. During that period, fish were bypassed back to the river 175 days and were trapped on 35 days, An estimated 1,675 pounds of juvenile fish were transported from Westland to the Umatilla River boat ramp (RM 0.5), Approximately 80% of the juveniles transported were salmonids, No steelhead kelts were hauled from Westland this year. The Threemile Dam west bank juvenile bypass was operated from October 4 to November 1, 1996 and from March 26 to July 7, 1997. The juvenile trap was not operated this year. 6 refs., 6 figs., 6 tabs.

  7. Growth, condition factor, and bioenergetics modeling link warmer stream temperatures below a small dam to reduced performance of juvenile steelhead

    USGS Publications Warehouse

    Sauter, S.T.; Connolly, P.J.

    2010-01-01

    We investigated the growth and feeding performance of juvenile steelhead Oncorhynchus mykiss using field measures and bioenergetics modeling. Juvenile steelhead populations were sampled from mid-June through August 2004 at study sites upstream and downstream of Hemlock Dam. The growth and diet of juvenile steelhead were determined for a warm (summer) and subsequent (late summer) transitional period at each study site. Empirical data on the growth and diet of juvenile steelhead and mean daily temperatures were used in a bioenergetics model to estimate the proportion of maximum consumption achieved by juvenile steelhead by site and period. Modeled estimates of feeding performance were better for juvenile steelhead at the upstream compared to the downstream site during both periods. The median condition factor of juvenile steelhead did not change over the summer at the upstream site, but showed a significant decline over time at the downstream site. A negative trend in median condition factor at the downstream site supported bioenergetics modeling results that suggested the warmer stream temperatures had a negative impact on juvenile steelhead. Bioenergetics modeling predicted a lower feeding performance for juvenile steelhead rearing downstream compared to upstream of Hemlock Dam although food availability appeared to be limited at both study sites during the warm period. Warmer water temperatures, greater diel variation, and change in diel pattern likely led to the reduced feeding performance and reduced growth, which could have affected the overall survival of juvenile steelhead downstream of Hemlock Dam. ?? 2010 by the Northwest Scientific Association.

  8. Use of a Fish Transportation Barge for Increasing Returns of Steelhead Imprinted for Homing, Final Report.

    SciTech Connect

    Harmon, Jerrel R.

    1989-08-01

    The objective of this 7-year National Fisheries Service study, which began is 1982, was to determine if transporting juvenile steelhead (Oncorhynchus mykiss) by truck and barge from Dworshak National Fish Hatchery (NFH), on the Clearwater River, to a release site on the Columbia River below Bonneville Dam would result in increased returns of adults to the various fisheries and to the hatchery homing site. During 1982 and 1983, over 500,000 marked juvenile steelhead were serially released as controls from the hatchery or barged as test fish to below Bonneville Dam. Recoveries of marked adults to various recovery sites are complete. Fish released in 1983 showed a stronger homing ability and more rapid upstream migration than test fish released in 1982. Most adults from both control and test releases in 1983 and control releases in 1982 migrated a considerable distance upstream and overwintered in the Snake and Clearwater Rivers--behavior similar to Clearwater River fish previously transported from Lower Granite Dam. In contrast, many of the adults from test releases in 1982 failed to migrate upstream during the fall, overwintered in the Columbia River, and migrated upstream the following spring. Survival of control fish released at Dworshak NFH in late April 1982 was substantially higher than survival of those released in mid-May. Survival and homing of control fish released in late April and early May 1983 were over 10 times that for fish released in late May. Return of adults from normal hatchery releases in 1982 was the highest ever observed at Dworshak NFH.

  9. EFFECTS OF AIR-SUPERSATURATED WATER ON SURVIVAL OF PACIFIC SALMON AND STEELHEAD SMOLTS

    EPA Science Inventory

    Coho (Oncorhynchus kisutch) and sockeye (O. nerka) salmon smolts and steelhead trout (Salmo gairdneri) smolts were exposed to several concentrations of air-supersaturated water in the laboratory from March through June, 1974, the normal fish migration period in the Columbia River...

  10. Characterization of 22 novel single nucleotide polymorphism markers in steelhead and rainbow trout

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Thirty-two individuals representing coastal and inland populations of steelhead and rainbow trout (Oncorhynchus mykiss) were sequenced at 15 ESTs and 9 microsatellite loci to identify single nucleotide polymorphisms (SNPs). Sixty-two polymorphisms were discovered during the screen and 13 were devel...

  11. Smolt Monitoring Program, Volume I, Migrational Characteristics of Columbia Basin Salmon and Steelhead Trout, 1986 Annual Report.

    SciTech Connect

    Fish Passage Center

    1987-02-01

    This report presents the results of post-seasonal analyses including timing and relative magnitude of the outmigration, travel time for marked hatchery releases, and survival in mid-Columbia and lower Snake River index reaches. Travel time of marked yearling and sub-yearling chinook salmon (Oncorhynchus tsawytscha), sockeye salmon (Oncorhynchus nerka), and steelhead trout (Salmo gairdneri) is measured between specific sampling points in the system. Marked groups usually represent major hatchery production stocks. Survival estimates are computed for specific spring chinook and steelhead marked groups. Arrival time and duration of outmigration of the chinook, sockeye, coho (Oncorhynchus kisutch) and steelhead runs are reported at key sampling points. Hatchery and brand release information for 1986 is also listed.

  12. PEPA-1* genotype affects return rate for hatchery steelhead

    USGS Publications Warehouse

    Reisenbichler, R.R.; Hayes, M.C.; Rubin, S.P.; Wetzel, L.A.; Baker, B.M.

    2006-01-01

    Allozymes continue to be useful as genetic markers in a variety of studies; however, their utility often hinges on the selective neutrality of the allelic variation. Our study tested for neutrality between the two most common alleles (*100 and *110) at the cytosol nonspecific dipeptidase locus (PEPA-1*) in steelhead Oncorhynchus mykiss from Dworshak National Fish Hatchery in Idaho. We tested for differential growth and survival among fish with the * 100/100, *100/ 110, and *110/110 genotypes rearing in a hatchery or a natural stream. We repeated the study for two year-classes, using heterozygous (*100/110) adults to make the experimental crosses. This design avoided differences in family contribution among genotypes because each cross produced all three genotypes. We divided the progeny from each family into two groups. One group was reared in a hatchery for 1 year and then released for migration to the sea and subsequent return to the hatchery as adults. The other group was released into a natural stream and monitored for 3 years. We found no significant differences in size or survival among PEPA-1* genotypes for either the naturally reared fish or the hatchery-reared fish immediately prior to release as smolts. For females, survival to returning adult also was similar among genotypes; however, hatchery-reared males with the *110/110 genotype returned at a higher rate than did males with the *100/ 100 genotype; heterozygous males were intermediate. These results indicate that selection occurs at the PEPA-1* locus or at one or more loci tightly linked to it. The finding of nearly equal frequencies for these two alleles in the source population suggests that selection differentials among genotypes reverse or vary from year to year; otherwise, steady directional selection would drive the *100 allele to low frequencies or extinction. Locus PEPA-1* seems inappropriate for genetic marks in studies of steelhead that span the full life cycle and probably should be avoided

  13. Compendium of Low-Cost Pacific Salmon and Steelhead Trout Production Facilities and Practices in the Pacific Northwest.

    SciTech Connect

    Senn, Harry G.

    1984-09-01

    The purpose was to research low capital cost salmon and steelhead trout production facilities and identify those that conform with management goals for the Columbia Basin. The species considered were chinook salmon (Oncorhynchus tshawytscha), coho salmon (O. kisutch), sockeye salmon (O. nerka), and steelhead trout (Salmo gairdneri). This report provides a comprehensive listing of the facilities, techniques, and equipment used in artificial production in the Pacific Northwest. (ACR)

  14. Mycobacterial infections in adult salmon and steelhead trout returning to the Columbia River Basin and other areas in 1957

    USGS Publications Warehouse

    1959-01-01

    The degree of incidence of acid -fast bacillus infections in adult salmonid fishes was determined. The disease was shown to be widely distributed in the area examined. It is believed the primary source of infection is derived from the hatchery practice of feeding infected salmon products to juvenile fish. One group of marked adults that had been hatchery reared for 370 days showed a 62 percent incidence of infection. A statistical analysis indicated that length of fish is independent of infection

  15. Features of adult neurogenesis and neurochemical signaling in the Cherry salmon Oncorhynchus masou brain☆

    PubMed Central

    Pushchina, Evgeniya V.; Obukhov, Dmitry K.; Varaksin, Anatoly A.

    2013-01-01

    We investigated the distribution of gamma aminobutyric acid, tyrosine hydroxylase and nitric oxide-producing elements in a cherry salmon Oncorhynchus masou brain at various stages of postnatal ontogenesis by immunohistochemical staining and histochemical staining. The periventricular region cells exhibited the morphology of neurons and glia including radial glia-like cells and contained several neurochemical substances. Heterogeneous populations of tyrosine hydroxylase-, gamma aminobutyric acid-immunoreactive, as well as nicotinamide adenine dinucleotide phosphate diaphorase-positive cells were observed in proliferating cell nuclear antigen-immunoreactive proliferative zones in periventricular area of diencephalon, central grey layer of dorsomedial tegmentum, medulla and spinal cord. Immunolocalization of Pax6 in the cherry salmon brain revealed a neuromeric construction of the brain at various stages of postnatal ontogenesis, and this was confirmed by tyrosine hydroxylase and gamma aminobutyric acid labeling. PMID:25206367

  16. Movement and feeding ecology of recently emerged steelhead in Lake Ontario tributaries

    USGS Publications Warehouse

    Johnson, James H.; McKenna, James E., Jr.; Douglass, Kevin A.

    2012-01-01

    Steelhead (Oncorhynchus mykiss) ascend several Lake Ontario tributaries to spawn and juveniles are often the most abundant salmonid where spawning is successful. Movement and diet of recently emerged subyearling steelhead were examined in three New York tributaries of Lake Ontario. Downstream movement occurred mainly at night and consisted of significantly smaller fry that were feeding at lower levels than resident fry. Fry fed at the highest rate during the day and chironomids and baetids were the main components of their diet. The diet composition of steelhead fry was closely associated with the composition of the benthos in Trout Brook but more similar to the composition of the drift in the other streams. Daily ration was similar among streams, ranging from 10.2 to 14.3%. These findings are consistent with previous findings on the ecology of steelhead fry, as well as fry of other salmonid species

  17. The effects of river impoundment and hatchery rearing on the migration behavior of juvenile steelhead in the Lower Snake River, Washington

    USGS Publications Warehouse

    Plumb, J.M.; Perry, R.W.; Adams, N.S.; Rondorf, D.W.

    2006-01-01

    We used radiotelemetry to monitor the migration behavior of juvenile hatchery and wild steelhead Oncorhynchus mykiss as they migrated through Lower Granite Reservoir and Dam on the lower Snake River, Washington. From 1996 to 2001, we surgically implanted radio transmitters in 1,540 hatchery steelhead and 1,346 wild steelhead. For analysis, we used the inverse Gaussian distribution to describe travel time distributions for cohorts (>50 fish) of juvenile steelhead as they migrated downriver. Mean travel rates were significantly related to reach- and discharge-specific water velocities. Also, mean travel rates near the dam were slower for a given range of water velocities than were mean travel rates through the reservoir, indicating that the presence of the dam caused delay to juvenile steelhead over and above the effect of water velocity. Hatchery steelhead took about twice as long as wild steelhead to pass the dam as a result of the higher proportions of hatchery steelhead traveling upriver from the dam. Because upriver travel and the resulting migration delay might decrease survival, it is possible that hatchery steelhead survive at lower rates than wild steelhead. Our analysis identified a discharge threshold (???2,400 m3/s) below which travel time and the percentage of fish traveling upriver from the dam increased rapidly, providing support for the use of minimum flow targets to mitigate for fish delay and possibly enhance juvenile steelhead survival.

  18. Steelhead Supplementation in Idaho Rivers, 2000 Annual Report.

    SciTech Connect

    Byrne, Alan

    2001-01-01

    In 2000, we continued our assessment of the Sawtooth Hatchery steelhead stock to reestablish natural populations in Beaver and Frenchman creeks in the upper Salmon River. We stocked both streams with 15 pair of hatchery adults and estimated the potential smolt production from the 1999 outplant. I estimated that about nine smolts per female could be produced in both streams from the 1999 outplant. The smolt-to-adult return would need to exceed 20% to return two adults at this level of production. In the Red River drainage, we stocked Dworshak hatchery stock fingerlings and smolts, from 1993 to 1999, to assess which life-stage produces more progeny when the adults return to spawn. In 2000, we operated the Red River weir to trap adults that returned from these stockings, but none were caught from either group. We continued to monitor wild steelhead populations in the Lochsa and Selway river drainages. We estimated that 26 wild adult steelhead returned to Fish Creek. This is the lowest adult escapement we have documented (when the weir was intact all spring) since we began monitoring Fish Creek in 1992. I estimated that nearly 25,000 juvenile steelhead migrated out of Fish Creek this year. Juvenile steelhead densities in Lochsa and Selway tributaries were similar to those observed in 1999. In 2000, we obtained funding for a DNA analysis to assess Idaho's steelhead stock structure. We collected fin samples from wild steelhead in 70 streams of the Clearwater, Snake, and Salmon River drainages and from our five hatchery stocks. The DNA analysis was subcontracted to Dr. Jennifer Nielsen, Alaska Biological Science Center, Anchorage, and will be completed in 2001.

  19. Escapement and Productivity of Spring Chinook and Summer Steelhead in the John Day River Basin, Technical Report 2004-2005.

    SciTech Connect

    Wilson, Wayne

    2007-04-01

    The objectives are: (1) Estimate number and distribution of spring Chinook salmon Oncorhynchus tshawytscha redds and spawners in the John Day River subbasin; and (2) Estimate smolt-to-adult survival rates (SAR) and out-migrant abundance for spring Chinook and summer steelhead O. mykiss and life history characteristics of summer steelhead. Spawning ground surveys for spring (stream-type) Chinook salmon were conducted in four main spawning areas (Mainstem, Middle Fork, North Fork, and Granite Creek System) and seven minor spawning areas (South Fork, Camas Creek, Desolation Creek, Trail Creek, Deardorff Creek, Clear Creek, and Big Creek) in the John Day River basin during August and September of 2005. Census surveys included 298.2 river kilometers (88.2 rkm within index, 192.4 rkm additional within census, and 17.6 rkm within random survey areas) of spawning habitat. We observed 902 redds and 701 carcasses including 227 redds in the Mainstem, 178 redds in the Middle Fork, 420 redds in the North Fork, 62 redds in the Granite Creek System, and 15 redds in Desolation Creek. Age composition of carcasses sampled for the entire basin was 1.6% age 3, 91.2% age 4, and 7.1% age 5. The sex ratio was 57.4% female and 42.6% male. Significantly more females than males were observed in the Granite Creek System. During 2005, 82.3% of female carcasses sampled had released all of their eggs. Significantly more pre-spawn mortalities were observed in Granite Creek. Nine (1.3%) of 701 carcasses were of hatchery origin. Of 298 carcasses examined, 4.0% were positive for the presence of lesions. A significantly higher incidence of gill lesions was found in the Granite Creek System when compared to the rest of the basin. Of 114 kidney samples tested, two (1.8%) had clinical BKD levels. Both infected fish were age-4 females in the Middle Fork. All samples tested for IHNV were negative. To estimate spring Chinook and summer steelhead smolt-to-adult survival (SAR) we PIT tagged 5,138 juvenile

  20. Tissue specific uptake and elimination of perfluoroalkyl acids (PFAAs) in adult rainbow trout (Oncorhynchus mykiss) after dietary exposure.

    PubMed

    Falk, Sandy; Failing, Klaus; Georgii, Sebastian; Brunn, Hubertus; Stahl, Thorsten

    2015-06-01

    Tissue specific uptake and elimination of perfluoroalkyl acids (PFAAs) were studied in rainbow trout (Oncorhynchus mykiss). Adult trout were exposed to perfluorobutane sulfonic acid (PFBS), perfluorohexane sulfonic acid (PFHxS), perfluorooctane sulfonic acid (PFOS), perfluorooctanoic acid (PFOA) and perfluorononanoic acid (PFNA) via food over a time period of 28d. In the following 28-d depuration period the fish were fed PFAA-free food. At defined sampling times four animals were removed from the experimental tank, euthanized and dissected. Muscle, liver, kidneys, gills, blood, skin and carcass were examined individually. At the end of the accumulation phase between 0.63% (PFOA) and 15.5% (PFOS) of the absolute, applied quantity of PFAAs was recovered in the whole fish. The main target organ was the liver with recovery rates between 0.11% (PFBS) and 4.01% (PFOS) of the total amount of ingested PFAAs. Perfluoroalkyl sulfonic acids were taken up more readily and had longer estimated elimination half-lives than perfluoroalkyl carboxylic acids of the same chain length. The longest estimated elimination half-lives were found to be for PFOS between 8.4d in muscle tissue and 20.4d in the liver and for PFNA between 8.2d in the blood and 11.6d in the liver. PMID:25022474

  1. Steelhead Kelt Reconditioning and Reproductive Success, 2008 Annul Report.

    SciTech Connect

    Hatch, Douglas R.

    2009-04-02

    Iteroparity, the ability to repeat spawn, is a natural life history strategy that is expressed by some species from the family Salmonidae. Current rates of observed steelhead Oncorhynchus mykiss iteroparity rates in the Columbia River Basin are severely depressed due to anthropogenic development which includes operation of the hydropower system and other habitat degradations. Artificial reconditioning, which is the process of culturing post-spawned fish (kelts) in a captive environment until they are able to reinitiate feeding, growth, and redevelop mature gonads, is evaluated in this study as method to restore depressed steelhead populations. To test the efficacy of steelhead kelt reconditioning as a management and recovery tool different scenarios were investigated ranging from very low intensity (collect and transport fish) to high intensity (collect and feed fish in captivity until rematuration). Examinations of gamete and progeny viability were performed for first-time spawners and reconditioned kelt steelhead. We have continued to examine reproductive success of reconditioned kelt steelhead in Omak Creek using microsatellite loci to perform parentage analysis on juvenile O. mykiss . The groundwork has also begun on developing a genetic analysis of the Yakima subbasin in order to determine steelhead kelt contribution by utilizing parentage analysis on a larger scale. A research and study plan has been developed cooperatively with the University of Idaho to determine the feasibility of steelhead kelt reconditioning program in the Snake River Basin. Analysis of management scenarios indicated that while no-term and short-term reconditioned kelts continue to perform well outmigrating to the ocean but returns from these groups have been low ranging from 0-12% during 2002-2008. Survival (56%) of fish in the long-term treatment in 2008 was the highest we have observed in this project. Analyzing the three different management scenarios within the Yakima River subbasin

  2. 50 CFR 226.212 - Critical habitat for 13 Evolutionarily Significant Units (ESUs) of salmon and steelhead...

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 50 Wildlife and Fisheries 7 2010-10-01 2010-10-01 false Critical habitat for 13 Evolutionarily Significant Units (ESUs) of salmon and steelhead (Oncorhynchus spp.) in Washington, Oregon and Idaho. 226.212 Section 226.212 Wildlife and Fisheries NATIONAL MARINE FISHERIES SERVICE, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT...

  3. 50 CFR 226.212 - Critical habitat for 13 Evolutionarily Significant Units (ESUs) of salmon and steelhead...

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 10 2014-10-01 2014-10-01 false Critical habitat for 13 Evolutionarily Significant Units (ESUs) of salmon and steelhead (Oncorhynchus spp.) in Washington, Oregon and Idaho. 226.212 Section 226.212 Wildlife and Fisheries NATIONAL MARINE FISHERIES SERVICE, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT...

  4. 50 CFR 226.212 - Critical habitat for 13 Evolutionarily Significant Units (ESUs) of salmon and steelhead...

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 10 2013-10-01 2013-10-01 false Critical habitat for 13 Evolutionarily Significant Units (ESUs) of salmon and steelhead (Oncorhynchus spp.) in Washington, Oregon and Idaho. 226.212 Section 226.212 Wildlife and Fisheries NATIONAL MARINE FISHERIES SERVICE, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT...

  5. 50 CFR 226.212 - Critical habitat for 13 Evolutionarily Significant Units (ESUs) of salmon and steelhead...

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 10 2012-10-01 2012-10-01 false Critical habitat for 13 Evolutionarily Significant Units (ESUs) of salmon and steelhead (Oncorhynchus spp.) in Washington, Oregon and Idaho. 226.212 Section 226.212 Wildlife and Fisheries NATIONAL MARINE FISHERIES SERVICE, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT...

  6. Post-release behavior and movement patterns of Chinook salmon (Oncorhynchus tshawytscha) and coho salmon (Oncorhynchus kisutch) after capture using alternative commercial fish gear, lower Columbia River, Washington and Oregon, 2013

    USGS Publications Warehouse

    Liedtke, Theresa L.; Kock, Tobias J.; Evans, Scott D.; Hansen, Gabriel S.; Rondorf, Dennis W.

    2014-01-01

    In 2011 and 2012, WDFW conducted post-release mortality studies of steelhead (Oncorhynchus mykiss), Chinook salmon (Oncorhynchus tshawytscha), and coho salmon (Oncorhynchus kisutch) that were captured using beach or purse seines. These studies were comprised of two groups of fish tagged with passive integrated transponder tags (PIT tags): (1) treatment fish that were captured by one of the gear types 9–25 river kilometers (rkm) downstream of Bonneville Dam (rkm 234); and (2) control fish that were captured at the Adult Fish Facility near the Washington shore fish ladder at Bonneville Dam, and then transported and released 8 rkm downstream of the Bonneville Dam. Fish were confirmed to have survived if they moved upstream and were detected on PIT-tag antennas at or upstream of Bonneville Dam, were recovered at hatcheries or at the dam, or were captured by commercial or sport fishers. Post-release survival estimates were higher for steelhead (89–98 percent) than for Chinook salmon and coho salmon (50–90 percent; Washington Department of Fish and Wildlife, unpub. data, 2014). However, some Chinook salmon and coho salmon return to hatcheries, or spawn in the mainstem Columbia River and in tributaries downstream of Bonneville Dam. The proportion of Chinook salmon and coho salmon in the treatment group that were destined for areas downstream of Bonneville Dam likely was higher than in the control group because the control fish were collected as they were attempting to pass the dam. If this assertion was true, mortality would have been overestimated in these studies, so WDFW developed a study plan to determine the post-release movements and intended location of Chinook salmon and coho salmon collected with beach and purse seines in the lower Columbia River.

  7. Cell proliferation and apoptosis in optic nerve and brain integration centers of adult trout Oncorhynchus mykiss after optic nerve injury

    PubMed Central

    Pushchina, Evgeniya V.; Shukla, Sachin; Varaksin, Anatoly A.; Obukhov, Dmitry K.

    2016-01-01

    Fishes have remarkable ability to effectively rebuild the structure of nerve cells and nerve fibers after central nervous system injury. However, the underlying mechanism is poorly understood. In order to address this issue, we investigated the proliferation and apoptosis of cells in contralateral and ipsilateral optic nerves, after stab wound injury to the eye of an adult trout Oncorhynchus mykiss. Heterogenous population of proliferating cells was investigated at 1 week after injury. TUNEL labeling gave a qualitative and quantitative assessment of apoptosis in the cells of optic nerve of trout 2 days after injury. After optic nerve injury, apoptotic response was investigated, and mass patterns of cell migration were found. The maximal concentration of apoptotic bodies was detected in the areas of mass clumps of cells. It is probably indicative of massive cell death in the area of high phagocytic activity of macrophages/microglia. At 1 week after optic nerve injury, we observed nerve cell proliferation in the trout brain integration centers: the cerebellum and the optic tectum. In the optic tectum, proliferating cell nuclear antigen (PCNA)-immunopositive radial glia-like cells were identified. Proliferative activity of nerve cells was detected in the dorsal proliferative (matrix) area of the cerebellum and in parenchymal cells of the molecular and granular layers whereas local clusters of undifferentiated cells which formed neurogenic niches were observed in both the optic tectum and cerebellum after optic nerve injury. In vitro analysis of brain cells of trout showed that suspension cells compared with monolayer cells retain higher proliferative activity, as evidenced by PCNA immunolabeling. Phase contrast observation showed mitosis in individual cells and the formation of neurospheres which gradually increased during 1–4 days of culture. The present findings suggest that trout can be used as a novel model for studying neuronal regeneration. PMID:27212918

  8. Consequences of high temperatures and premature mortality on the transcriptome and blood physiology of wild adult sockeye salmon (Oncorhynchus nerka).

    PubMed

    Jeffries, Ken M; Hinch, Scott G; Sierocinski, Thomas; Clark, Timothy D; Eliason, Erika J; Donaldson, Michael R; Li, Shaorong; Pavlidis, Paul; Miller, Kristi M

    2012-07-01

    Elevated river water temperature in the Fraser River, British Columbia, Canada, has been associated with enhanced mortality of adult sockeye salmon (Oncorhynchus nerka) during their upriver migration to spawning grounds. We undertook a study to assess the effects of elevated water temperatures on the gill transcriptome and blood plasma variables in wild-caught sockeye salmon. Naturally migrating sockeye salmon returning to the Fraser River were collected and held at ecologically relevant temperatures of 14°C and 19°C for seven days, a period representing a significant portion of their upstream migration. After seven days, sockeye salmon held at 19°C stimulated heat shock response genes as well as many genes associated with an immune response when compared with fish held at 14°C. Additionally, fish at 19°C had elevated plasma chloride and lactate, suggestive of a disturbance in osmoregulatory homeostasis and a stress response detectable in the blood plasma. Fish that died prematurely over the course of the holding study were compared with time-matched surviving fish; the former fish were characterized by an upregulation of several transcription factors associated with apoptosis and downregulation of genes involved in immune function and antioxidant activity. Ornithine decarboxylase (ODC1) was the most significantly upregulated gene in dying salmon, which suggests an association with cellular apoptosis. We hypothesize that the observed decrease in plasma ions and increases in plasma cortisol that occur in dying fish may be linked to the increase in ODC1. By highlighting these underlying physiological mechanisms, this study enhances our understanding of the processes involved in premature mortality and temperature stress in Pacific salmon during migration to spawning grounds. PMID:22957178

  9. Excess post-exercise oxygen consumption in adult sockeye (Oncorhynchus nerka) and coho (O. kisutch) salmon following critical speed swimming.

    PubMed

    Lee, C G; Farrell, A P; Lotto, A; Hinch, S G; Healey, M C

    2003-09-01

    The present study measured the excess post-exercise oxygen cost (EPOC) following tests at critical swimming speed (Ucrit) in three stocks of adult, wild, Pacific salmon (Oncorhynchus sp.) and used EPOC to estimate the time required to return to their routine level of oxygen consumption (recovery time) and the total oxygen cost of swimming to Ucrit. Following exhaustion at Ucrit, recovery time was 42-78 min, depending upon the fish stock. The recovery times are several-fold shorter than previously reported for juvenile, hatchery-raised salmonids. EPOC varied fivefold among the fish stocks, being greatest for Gates Creek sockeye salmon (O. nerka), which was the salmon stock that had the longest in-river migration, experienced the warmest temperature and achieved the highest maximum oxygen consumption compared with the other salmon stocks that were studied. EPOC was related to Ucrit, which in turn was directly influenced by ambient test temperature. The non-aerobic cost of swimming to Ucrit was estimated to add an additional 21.4-50.5% to the oxygen consumption measured at Ucrit. While these non-aerobic contributions to swimming did not affect the minimum cost of transport, they were up to three times higher than the value used previously for an energetic model of salmon migration in the Fraser River, BC, Canada. As such, the underestimate of non-aerobic swimming costs may require a reevaluation of the importance of how in-river barriers like rapids and bypass facilities at dams, and year-to-year changes in river flows and temperatures, affect energy use and hence migration success. PMID:12909706

  10. Cell proliferation and apoptosis in optic nerve and brain integration centers of adult trout Oncorhynchus mykiss after optic nerve injury.

    PubMed

    Pushchina, Evgeniya V; Shukla, Sachin; Varaksin, Anatoly A; Obukhov, Dmitry K

    2016-04-01

    Fishes have remarkable ability to effectively rebuild the structure of nerve cells and nerve fibers after central nervous system injury. However, the underlying mechanism is poorly understood. In order to address this issue, we investigated the proliferation and apoptosis of cells in contralateral and ipsilateral optic nerves, after stab wound injury to the eye of an adult trout Oncorhynchus mykiss. Heterogenous population of proliferating cells was investigated at 1 week after injury. TUNEL labeling gave a qualitative and quantitative assessment of apoptosis in the cells of optic nerve of trout 2 days after injury. After optic nerve injury, apoptotic response was investigated, and mass patterns of cell migration were found. The maximal concentration of apoptotic bodies was detected in the areas of mass clumps of cells. It is probably indicative of massive cell death in the area of high phagocytic activity of macrophages/microglia. At 1 week after optic nerve injury, we observed nerve cell proliferation in the trout brain integration centers: the cerebellum and the optic tectum. In the optic tectum, proliferating cell nuclear antigen (PCNA)-immunopositive radial glia-like cells were identified. Proliferative activity of nerve cells was detected in the dorsal proliferative (matrix) area of the cerebellum and in parenchymal cells of the molecular and granular layers whereas local clusters of undifferentiated cells which formed neurogenic niches were observed in both the optic tectum and cerebellum after optic nerve injury. In vitro analysis of brain cells of trout showed that suspension cells compared with monolayer cells retain higher proliferative activity, as evidenced by PCNA immunolabeling. Phase contrast observation showed mitosis in individual cells and the formation of neurospheres which gradually increased during 1-4 days of culture. The present findings suggest that trout can be used as a novel model for studying neuronal regeneration. PMID:27212918

  11. Minthorn Springs Creek Summer Juvenile Release and Adult Collection Facility; 1994 Annual Report.

    SciTech Connect

    Rowan, Gerald D.

    1995-05-01

    The Confederated Tribes of the Umatilla Indian Reservation (CTUIR) and Oregon Department of Fish and Wildlife (ODFW) are cooperating in a joint effort to enhance steelhead and re-establish salmon runs in the Umatilla River Basin. Bonifer Pond, Minthorn Springs and Imeques C-mem-ini-kem acclimation facilities are operated for acclimation and release of juvenile summer steelhead (Oncorhynchus mykiss), fall and spring chinook salmon (O. tshawytscha) and coho salmon (O, kisutch). Minthorn is also used for holding and spawning summer steelhead, fall chinook and coho salmon. In the spring of 1994, juvenile summer steelhead were acclimated at Bonifer and Minthorn. At Imeques C-mem-ini-kem, juvenile spring chinook were acclimated in the spring and fall. A total of 92 unmarked and 42 marked summer steelhead were collected for broodstock at Three Mile Dam from October 1, 1993 through May 2, 1994 and held at Minthorn. An estimated 234,432 green eggs were taken from 48 females. The eggs were transferred to Irrigon Hatchery for incubation and early rearing. Fingerlings were transferred to Umatilla Hatchery for final rearing and release into the Umatilla River in 1995. Fall chinook and coho salmon broodstock were not collected in 1994. Coded-wire tag recovery information was accessed to determine the contribution of Umatilla River releases to ocean, Columbia River and Umatilla River fisheries. Total estimated juvenile adult survival rates are detailed in this document.

  12. Upstream movement of residual hatchery steelhead into areas containing bull trout and cutthroat trout.

    SciTech Connect

    McMichael, Geoffrey A. ); Pearsons, Todd N.

    2000-11-01

    Hatchery-reared steelhead Oncorhynchus mykiss that do not emigrate as smolts shortly after release may negatively impact wild fish communities through ecological interactions. We used systematic, stratified snorkeling surveys to document the relative abundance of wild rainbow trout O. mykiss, bull trout Salvelinus confluentus, and westslope cutthroat trout O. clarki lewisi as well as the upstream limit of residual hatchery steelhead (hatchery-reared steelhead that had failed to emigrate before June 1). Our objective was to determine whether residual hatchery steelhead had migrated upstream from their release point into an area containing a threatened population of bull trout and cutthroat trout. Hatchery steelhead made up a larger portion of the salmonid community in the sites near their release location (mean= 52.5%, range= 29-79%), and constituted a lower proportion (mean= 4.8%, range= 0-14%) of the salmonid community as distance upstream of the release location increased. However, residual hatchery steelhead had migrated over 12 km upstream into an area containing a threatened stock of bull trout and westslope cutthroat trout O. clarki lewisi.

  13. Idaho Steelhead Monitoring and Evaluation Studies : Annual Progress Report 2007.

    SciTech Connect

    Copeland, Timothy; Putnam, Scott

    2008-12-01

    The goal of Idaho Steelhead Monitoring and Evaluation Studies is to collect monitoring data to evaluate wild and natural steelhead populations in the Clearwater and Salmon river drainages. During 2007, intensive population data were collected in Fish Creek (Lochsa River tributary) and Rapid River (Little Salmon River tributary); extensive data were collected in other selected spawning tributaries. Weirs were operated in Fish Creek and Rapid River to estimate adult escapement and to collect samples for age determination and genetic analysis. Snorkel surveys were conducted in Fish Creek, Rapid River, and Boulder Creek (Little Salmon River tributary) to estimate parr density. Screw traps were operated in Fish Creek, Rapid River, Secesh River, and Big Creek to estimate juvenile emigrant abundance, to tag fish for survival estimation, and to collect samples for age determination and genetic analysis. The estimated wild adult steelhead escapement in Fish Creek was 81 fish and in Rapid River was 32 fish. We estimate that juvenile emigration was 24,127 fish from Fish Creek; 5,632 fish from Rapid River; and 43,674 fish from Big Creek. The Secesh trap was pulled for an extended period due to wildfires, so we did not estimate emigrant abundance for that location. In cooperation with Idaho Supplementation Studies, trap tenders PIT tagged 25,618 steelhead juveniles at 18 screw trap sites in the Clearwater and Salmon river drainages. To estimate age composition, 143 adult steelhead and 5,082 juvenile steelhead scale samples were collected. At the time of this report, 114 adult and 1,642 juvenile samples have been aged. Project personnel collected genetic samples from 122 adults and 839 juveniles. We sent 678 genetic samples to the IDFG Eagle Fish Genetics Laboratory for analysis. Water temperature was recorded at 37 locations in the Clearwater and Salmon river drainages.

  14. Examination of the influence of juvenile Atlantic salmon on the feeding mode of juvenile steelhead in Lake Ontario tributaries

    USGS Publications Warehouse

    Johnson, James H.; Waldt, Emily M.

    2014-01-01

    We examined diets of 1204 allopatric and sympatric juvenile Atlantic salmon (Salmo salar) and steelhead (Oncorhynchus mykiss) in three tributaries of Lake Ontario. The diet composition of both species consisted primarily of ephemeropterans, trichopterans, and chironomids, although juvenile steelhead consumed more terrestrial invertebrates, especially at the sympatric sites. Subyearlings of both species consumed small prey (i.e. chironomids) whereas large prey (i.e. perlids) made up a higher percentage of the diet of yearlings. The diet of juvenile steelhead at the allopatric sites was more closely associated with the composition of the benthos than with the drift, but was about equally associated with the benthos and drift at the sympatric sites. The diet of both subyearling and yearling Atlantic salmon was more closely associated with the benthos than the drift at the sympatric sites. The evidence suggests that juvenile steelhead may subtly alter their feeding behavior in sympatry with Atlantic salmon. This behavioral adaptation may reduce competitive interactions between these species.

  15. Relationship of external fish condition to pathogen prevalence and out-migration survival in juvenile steelhead

    USGS Publications Warehouse

    Hostetter, N.J.; Evans, A.F.; Roby, D.D.; Collis, K.; Hawbecker, M.; Sandford, B.P.; Thompson, D.E.; Loge, F.J.

    2011-01-01

    Understanding how the external condition of juvenile salmonids is associated with internal measures of health and subsequent out-migration survival can be valuable for population monitoring programs. This study investigated the use of a rapid, nonlethal, external examination to assess the condition of run-of-the-river juvenile steelhead Oncorhynchus mykiss migrating from the Snake River to the Pacific Ocean. We compared the external condition (e.g., body injuries, descaling, external signs of disease, fin damage, and ectoparasite infestations) with (1) the internal condition of a steelhead as measured by the presence of selected pathogens detected by histopathology and polymerase chain reaction analysis and (2) out-migration survival through the Snake and Columbia rivers as determined by passive integrated transponder (PIT) tag technology. The results from steelhead captured and euthanized (n = 222) at Lower Monumental Dam on the lower Snake River in 2008 indicated that external condition was significantly correlated with selected measures of internal condition. The odds of testing positive for a pathogen were 39.2, 24.3, and 5.6 times greater for steelhead with severe or moderate external signs of disease or more than 20% descaling, respectively. Capture-recapture models of 22,451 PIT-tagged steelhead released at Lower Monumental Dam in 2007-2009 indicated that external condition was significantly correlated with juvenile survival. The odds of outmigration survival for steelhead with moderate or severe external signs of disease, more than 20% descaling, or severe fin damage were 5.7, 4.9, 1.6, and 1.3 times lower, respectively, than those for steelhead without these external conditions. This study effectively demonstrated that specific measures of external condition were associated with both the internal condition and out-migration survival of juvenile steelhead. ?? American Fisheries Society 2011.

  16. Physiological indices of seawater readiness in postspawning steelhead kelts

    USGS Publications Warehouse

    Buelow, Jessica; Moffitt, Christine M.

    2015-01-01

    Management goals to improve the recovery of steelhead (Oncorhynchus mykiss) stocks at risk of extinction include increasing the proportion of postspawning fish that survive and spawn again. To be successful, postspawning steelhead (kelts) migrating downstream to the ocean must prepare physiologically and physically for a seawater transition. We sampled blood, gill filaments, and evaluated the external condition of migrating kelts from an ESA-listed population in the Snake/Columbia River system over two consecutive years to evaluate their physiological readiness for transition to seawater. We chose attributes often considered as measures of preparation for seawater in juveniles, including gill Na+,K+ ATPase activity, plasma electrolytes and hormones to consider factors related to external condition, size and sex. We found kelts in good external condition had plasma profiles similar to downstream-migrating smolts. In addition, we found more than 80% of kelts ranked in good external condition had smolt-like body silvering. We compared measures from migrating kelts with samples obtained from hatchery fish at the time of spawning to confirm that Na+, K+ ATPase activity in kelts was significantly elevated over spawning fish. We found significant differences in gill Na+, K+ ATPase activity in migrating kelts between the years of sampling, but little indication of influence of fish condition. We conclude that the postspawning steelhead sampled exhibited a suite of behaviours, condition and physiology characteristic of fish prepared for successful transition to a seawater environment.

  17. Spatial segregation of spawning habitat limits hybridization between sympatric native Steelhead and Coastal Cutthroat Trout

    USGS Publications Warehouse

    Buehrens, T.W.; Glasgow, J.; Ostberg, Carl O.; Quinn, T.P.

    2013-01-01

    Native Coastal Cutthroat Trout Oncorhynchus clarkii clarkii and Coastal Steelhead O. mykiss irideus hybridize naturally in watersheds of the Pacific Northwest yet maintain species integrity. Partial reproductive isolation due to differences in spawning habitat may limit hybridization between these species, but this process is poorly understood. We used a riverscape approach to determine the spatial distribution of spawning habitats used by native Coastal Cutthroat Trout and Steelhead as evidenced by the distribution of recently emerged fry. Molecular genetic markers were used to classify individuals as pure species or hybrids, and individuals were assigned to age-classes based on length. Fish and physical habitat data were collected in a spatially continuous framework to assess the relationship between habitat and watershed features and the spatial distribution of parental species and hybrids. Sampling occurred in 35 reaches from tidewaters to headwaters in a small (20 km2) coastal watershed in Washington State. Cutthroat, Steelhead, and hybrid trout accounted for 35%, 42%, and 23% of the fish collected, respectively. Strong segregation of spawning areas between Coastal Cutthroat Trout and Steelhead was evidenced by the distribution of age-0 trout. Cutthroat Trout were located farther upstream and in smaller tributaries than Steelhead were. The best predictor of species occurrence at a site was the drainage area of the watershed that contributed to the site. This area was positively correlated with the occurrence of age-0 Steelhead and negatively with the presence of Cutthroat Trout, whereas hybrids were found in areas occupied by both parental species. A similar pattern was observed in older juveniles of both species but overlap was greater, suggesting substantial dispersal of trout after emergence. Our results offer support for spatial reproductive segregation as a factor limiting hybridization between Steelhead and Coastal Cutthroat Trout.

  18. Assessing fish predation on migrating juvenile steelhead and a retrospective comparison to steelhead survival through the Priest Rapids Hydroelectric Project, Columbia River, Washington, 2009-11

    USGS Publications Warehouse

    Hardiman, Jill M.; Counihan, Timothy D.; Burgess, Dave S.; Simmons, Katrina E.; Holmberg, Glen S.; Rogala, Josh; Polacek, Rochelle

    2012-01-01

    The U.S. Geological Survey (USGS) and the Washington Department of Fish and Wildlife (WDFW) have been working with the Public Utility District No. 2 of Grant County, Washington (Grant PUD), to increase their understanding of predator-prey interactions in the Priest Rapids Hydroelectric Project (PRP), Columbia River, Washington. For this study, the PRP is defined as the area approximately 6 kilometers upstream of Wanapum Dam to the Priest Rapids Dam tailrace, 397.1 miles from the mouth of the Columbia River. Past year’s low survival numbers of juvenile steelhead (Oncorhynchus mykiss) through Wanapum and Priest Rapids Dams has prompted Grant PUD, on behalf of the Priest Rapids Coordinating Committee, to focus research efforts on steelhead migration and potential causal mechanisms for low survival. Steelhead passage survival in 2009 was estimated at 0.944 through the Wanapum Development (dam and reservoir) and 0.881 through the Priest Rapids Development and for 2010, steelhead survival was 0.855 for Wanapum Development and 0.904 for Priest Rapids Development. The USGS and WDFW implemented field collection efforts in 2011 for northern pikeminnow (Ptychocheilus oregonensis), smallmouth bass (Micropterus dolomieu), and walleye (Sander vitreus, formerly Stizostedion vitreum) and their diets in the PRP. For predator indexing, we collected 948 northern pikeminnow, 237 smallmouth bass, 18 walleye, and two largemouth bass (Micropterus salmoides). The intent of this study was to provide standardized predation indices within individual reaches of the PRP to discern spatial variability in predation patterns. Furthermore, the results of the 2011 study were compared to results of a concurrent steelhead survival study. Our results do not indicate excessively high predation of Oncorhynchus spp. occurring by northern pikeminnow or smallmouth bass in any particular reach throughout the study area. Although we found Oncorhynchus spp. in the predator diets, the relative

  19. Characterize and Quantify Residual Steelhead in the Clearwater River, Idaho, 2002 Annual Report.

    SciTech Connect

    Brostrom, Jody K.

    2003-03-01

    We tagged 4,513 hatchery steelhead from Dworshak National Fish Hatchery (NFH), with Passive Integrated Transponder (PIT) tags to evaluate factors contributing to residualism. Steelhead from typical growth ponds (System I) averaged eight mm less and traveled two days faster to Lower Granite Dam than those in faster growth ponds (System II). The mean detection rates of steelhead by rearing system were 57.4%, 55.9%, and 57.8% for System I, System II, and System III. Steelhead released into Clear Creek, South Fork Clearwater River and directly from Dworshak NFH had detection rates of 55.0%, 59.1%, and 57.8%, respectively. Overall detection rate for all release sites, rearing systems and egg takes was 54.1%. We PIT tagged an additional 270 hatchery steelhead in the North Fork and mainstem Clearwater rivers and the adult ladder at Dworshak National Fish Hatchery between May 15 and October 29. In the four tributaries sampled, no hatchery steelhead were captured or observed. A total of 51 code d-wire tags were recovered; 3 were released at Dworshak NFH in 2001 and 47 in 2002. One fish was released at Clear Creek. Although sample sizes were small, we were able to verify that at least 33 residual steelhead tagged in 2001 persisted in the Clearwater River during winter and were detected at downstream dams in 2002. Final analysis will include influences of water flow and temperature in emigration success.

  20. Histological assessment of organs in sexually mature and post-spawning steelhead trout and insights into iteroparity

    USGS Publications Warehouse

    Penney, Zachary L.; Moffitt, Christine M.

    2014-01-01

    Steelhead trout (Oncorhynchus mykiss) are anadromous and iteroparous, but repeat-spawning rates are generally low. Like other anadromous salmonids, steelhead trout fast during freshwater spawning migrations, but little is known about the changes that occur in vital organs and tissues. We hypothesized that fish capable of repeat-spawning would not undergo the same irreversible degeneration and cellular necrosis documented in semelparous salmon. Using Snake River steelhead trout as a model we used histological analysis to assess the cellular architecture in the pyloric stomach, ovary, liver, and spleen in sexually mature and kelt steelhead trout. We observed 38 % of emigrating kelts with food or fecal material in the gastrointestinal tract. Evidence of feeding was more likely in good condition kelts, and feeding was associated with a significant renewal of villi in the pyloric stomach. No vitellogenic oocytes were observed in sections of kelt ovaries, but perinucleolar and early/late stage cortical alveolus oocytes were present suggesting iteroparity was possible. We documented a negative correlation between the quantity of perinucleolar oocytes in ovarian tissues and fork length of kelts suggesting that larger steelhead trout may invest more into a single spawning event. Liver and spleen tissues of both mature and kelt steelhead trout had minimal cellular necroses. Our findings indicate that the physiological processes causing rapid senescence and death in semelparous salmon are not evident in steelhead trout, and recovery begins in fresh water. Future management efforts to increase iteroparity in steelhead trout and Atlantic salmon must consider the physiological processes that influence post-spawning recovery.

  1. Migrational Characteristics of Columbia Basin Salmon and Steelhead Trout, Part II, Smolt Monitoring Program, 1984 Annual Report.

    SciTech Connect

    McConnaha, Willis E.

    1985-07-01

    The report describes the travel time of marked yearling and sub-yearling chinook salmon (Oncorhynchus tshawytscha), sockeye salmon (O. nerka), and steelhead trout (Salmo gairdneri) between points within the system, and reports the arrival timing and duration of the migrations for these species as well as coho salmon (O. kisutch). A final listing of 1984 hatchery releases is also included. 8 refs., 26 figs., 20 tabs.

  2. The needs of salmon and steelhead in balancing their conservation and use

    USGS Publications Warehouse

    Burger, C.V.

    2000-01-01

    Over the past 100 years, Pacific salmon Oncorhynchus spp. and steelhead trout O. mykiss populations in the Pacific Northwest have experienced dramatic declines as a result of human population growth and associated development of the regioni??s natural resources. Any strategy to reverse those declines will depend on achieving consensus among a diverse group of stakeholders willing to (1) restore damaged habitats and watersheds; (2) consider the biological needs of salmonid fishes; and (3) understand, conserve, and manage existing levels of biodiversity within an ecosystem context. The objective of this chapter is to review and summarize the needs of Pacific salmon and steelhead trout from perspectives that promote their sustainability and perpetuity, and, within that context, provide a framework, for the development of a sustainable fisheries strategy. Although volumes of information are available on the life histories and habitat requirements of Pacific salmonids, new concepts have begun to address the importance of habitat complexity, genetic diversity among locally adapted populations, and the need for appropriate units of conservation. Habitat variability and complexity are the templates that produce diverse, locally adapted populations of Pacific salmon and steelhead trout. Molded by conditions in the environments they colonized, salmon and steelhead have unique adaptations they may have taken hundred i?? perhaps thousands i?? of years to evolve. Any strategy to reverse the declines of salmon and steelhead must focus on conserving both current levels of genetic diversity as well as restoration and maintenance of habitats compatible with the specific needs of individual populations. An argument can be made that we know enough already about the needs of our salmon and steelhead to allow us to make appropriate decisions. There is strong need to integrate what we know about local salmonid adaptations and habitat needs with conservation and management strategies

  3. Physiological, energetic and behavioural correlates of successful fishway passage of adult sockeye salmon Oncorhynchus nerka in the Seton River, British Columbia.

    PubMed

    Pon, L B; Hinch, S G; Cooke, S J; Patterson, D A; Farrell, A P

    2009-04-01

    Electromyogram (EMG) radio telemetry was used in conjunction with physiological biopsy to relate prior physiological condition and subsequent swimming energetics and behaviours to passage success of 13 wild adult sockeye salmon Oncorhynchus nerka at a vertical-slot fishway on the Seton River, British Columbia. At the time of capture, plasma lactate, glucose and cortisol levels indicated that fish were not exhibiting unusually high levels of physiological stress. Very few differences existed between successful and unsuccessful fish in body size, initial plasma physiology and energy state and mean swim speed and energy use during passage. Generally, fish did not employ burst swimming during successful or failed attempts at passage, indicating that failure was probably not related to metabolic acidosis. Plasma Na(+) concentration was significantly lower in unsuccessful fish (P < 0.05), which is suggestive of a depressed ionic state or a possible stress component, although values in all fish were within an expected range for migrant adult O. nerka. Nevertheless, six of 13 fish failed to reascend the fishway and remained in the tailrace of the dam for more than a day on average before moving downstream and away from the dam. During this time, fish were observed actively seeking a means of passage, suggesting that there may have been other, undetermined causes of passage failure. PMID:20735634

  4. Determination of malachite green residues in the eggs, fry, and adult muscle-tissue of rainbow-trout (Oncorhynchus-mykiss)

    USGS Publications Warehouse

    Allen, John L.; Gofus, J.E.; Meinertz, Jeffery R.

    1994-01-01

    Malachite green, an effective antifungal therapeutant used in fish culture, is a known teratogen. We developed a method to simultaneously detect both the chromatic and leuco forms of malachite green residues in the eggs, fry, and adult muscle tissue of rainbow trout (oncorhynchus mykiss). Homogenates of these tissues were fortified with [c-14] malachite green chloride and extracted with 1% (v/v) acetic acid in acetonitrile or in methanol. The extracts were partitioned with chloroform, dried, redissolved in mobile phase, and analyzed by liquid chromatography (lc) with postcolumn oxidation of leuco malachite green to the chromatic form. Lc fractions were collected every 30 s for quantitation by scintillation counting. Recoveries of total [c-14] malachite green chloride residue were 85 and 98% in eggs fortified with labeled malachite green at concentrations of 0.5 And 1.00 Mug/g, respectively; 68% in fry similarly fortified at a concentration of 0.65 Mug/g; and 66% in muscle homogenate similarly fortified at a level of 1.00 Mug/g. The method was tested under operational conditions by exposing adult rainbow trout to 1.00 Mg/l [c-14] malachite green chloride bath for 1 h. Muscle samples analyzed by sample oxidation and scintillation counting contained 1.3 And 0.5 Mug/g total malachite green chloride residues immediately after exposure and after a 5-day withdrawal period, respectively.

  5. A Genetic Monitoring and Evaluation Program for Supplemented Populations of Salmon and Steelhead in the Snake River Basin : 1992 Annual Report.

    SciTech Connect

    Waples, Robin S.

    1993-07-01

    This is the second report of research for an ongoing study to evaluate the genetic effects of using hatchery-reared fish to supplement natural populations of chinook salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss) in the Snake River Basin. The study plan involves yearly monitoring of genetic and meristic characteristics in hatchery, natural (supplemented), and wild (unsupplemented) populations in four different drainages for each species. This report summarizes the first two years of electrophoretic data for chinook salmon and steelhead and the first two years of meristic data for chinook salmon. Results obtained to date include the following: (1) Genetic variation was detected at 35 gene loci in chinook salmon and 50 gene loci in steelhead, both considerable increases over the number of polymorphic loci reported previously for Snake River populations. No substantial differences in levels of genetic variability were observed between years or between hatchery and natural/wild populations in either species. (2) In both species, statistically significant differences in allele frequency were typically found between years within populations. However, the temporal changes within populations were generally smaller than differences between populations. (3) Differences between chinook salmon populations classified as spring-and summer-run accounted for little of the overall genetic diversity; in contrast, substantial genetic differences were observed between ''B'' run steelhead from Dworshak Hatchery and ''A'' run populations from other study sites. (4) Estimates of the effective number of breeders per year (N,) derived from genetic data suggest that N{sub b} in natural and wild Snake River spring/summer chinook salmon populations is generally about one-quarter to three-quarters of the estimated number of adult spawners. (5) Analysis of the effects on data quality of sampling juveniles indicates that the small size of some wild fish may lead to a slight increase

  6. Effect of salinity changes on olfactory memory-related genes and hormones in adult chum salmon Oncorhynchus keta.

    PubMed

    Kim, Na Na; Choi, Young Jae; Lim, Sang-Gu; Jeong, Minhwan; Jin, Deuk-Hee; Choi, Cheol Young

    2015-09-01

    Studies of memory formation have recently concentrated on the possible role of N-methyl-d-aspartate receptors (NRs). We examined changes in the expression of three NRs (NR1, NR2B, and NR2C), olfactory receptor (OR), and adrenocorticotropic hormone (ACTH) in chum salmon Oncorhynchus keta using quantitative polymerase chain reaction (QPCR) during salinity change (seawater→50% seawater→freshwater). NRs were significantly detected in the diencephalon and telencephalon and OR was significantly detected in the olfactory epithelium. The expression of NRs, OR, and ACTH increased after the transition to freshwater. We also determined that treatment with MK-801, an antagonist of NRs, decreased NRs in telencephalon cells. In addition, a reduction in salinity was associated with increased levels of dopamine, ACTH, and cortisol (in vivo). Reductions in salinity evidently caused NRs and OR to increase the expression of cortisol and dopamine. We concluded that memory capacity and olfactory imprinting of salmon is related to the salinity of the environment during the migration to spawning sites. Furthermore, salinity affects the memory/imprinting and olfactory abilities, and cortisol and dopamine is also related with olfactory-related memories during migration. PMID:25933936

  7. Behavior of steelhead fry in a laboratory stream is affected by fish density but not rearing environment

    USGS Publications Warehouse

    Riley, Stephen C.; Tatara, Christopher P.; Berejikian, Barry A.; Flagg, Thomas A.

    2009-01-01

    We quantified the aggression, feeding, dominance, position choice, and territory size of naturally reared steelhead Oncorhynchus mykiss fry stocked with two types of hatchery-reared fry (from conventional and enriched rearing environments) at two densities in experimental flumes to determine how rearing environment and fish density affect the behavior of steelhead fry. We found that fry density had a significant effect on most response variables but that rearing treatment did not. The rates of threats and attacks were positively correlated with fry density, but the overall feeding rate was negatively correlated. Naturally reared fry were dominant more often at low densities, and hatchery-reared fry were dominant more often at high densities. There were no significant effects of hatchery rearing treatment on aggression, feeding, dominance, or territory size. The only significant effect of rearing treatment was on the position of naturally reared fry, which occupied more upstream positions when stocked with conventional than with enriched hatchery-reared fry. Overall, rearing environment had relatively little influence on the behavior of steelhead fry. Our results indicate that stocking hatchery-reared steelhead fry at low densities may have effects on similar-size wild fish comparable to an equivalent increase in the density of wild fish. We suggest that releasing hatchery-reared steelhead fry as a supplementation strategy may have few direct negative ecological effects on wild fry.

  8. Testing the synergistic effects of GnRH and testosterone on the reproductive physiology of pre-adult pink salmon Oncorhynchus gorbuscha.

    PubMed

    Crossin, G T; Hinch, S G; Cooke, S J; Patterson, D A; Lotto, A G; Van Der Kraak, G; Zohar, Y; Klenke, U; Farrell, A P

    2010-01-01

    To test the hypothesis that the hypothalmic gonadotropin-releasing hormone (GnRH) and testosterone (T) co-treatment stimulates both the hypothalmo-pituitary-gonadal (HPG) and hypothalmo-pituitary-interrenal axes, the reproductive and osmoregulatory responses of pre-adult pink salmon Oncorhynchus gorbuscha were compared after GnRH and T administration either alone or in combination. Relative to controls, neither GnRH nor T treatment resulted in significantly greater ovarian or testicular growth, but co-treatment significantly increased ovarian growth after 5 months. Interestingly, the stimulation was undetectable after 3 months. However, once daily photoperiod began shortening after the summer solstice, c. 2 months before the natural spawning date, GnRH+T-treated females were stimulated to produce larger ovaries. Final fish body length and the size of individual eggs did not differ among treatment groups. GnRH+T eggs, however, showed signs of advanced vitellogenesis relative to GnRH-treated and control eggs, whereas T-treated eggs became atretic. Testis size increased significantly from initial values and most males were spermiating, but this growth and development were independent of hormone treatments. Final plasma ion, metabolite and cortisol concentrations did not differ among treatment groups. It is concluded that GnRH+T co-treatment was effective in stimulating female but not male maturation. GnRH and T treatment, however, presumably had little effect on the hypothalmo-pituitary-interrenal axis as observed by ionoregulatory status. PMID:20738702

  9. [Reparative Neurogenesis in the Brain and Changes in the Optic Nerve of Adult Trout Oncorhynchus mykiss after Mechanical Damage of the Eye].

    PubMed

    Puschina, E V; Varaksin, A A; Obukhov, D K

    2016-01-01

    Reparative proliferation and neurogenesis in the brain integrative centers after mechanical eye injury in an adult trout Oncorhynchus mykiss have been studied. We have found that proliferation and neurogenesis in proliferative brain regions, the cerebellum, and the optic tectum were significantly enhanced after the eye injury. The cerebellum showed a significant increase in the proliferative activity of the cells of the dorsal proliferative zone and parenchymal cells of the molecular and granular layers. One week after the injury, PCNA-positive radial glia cells have been identified in the tectum. We have found for the first time that the eye trauma resulted in the development of local clusters of undifferentiated cells forming so called neurogenic niches in the tectum and cerebellum. The differentiation of neuronal cells detected by labeling cells with antibodies against the protein HuC/D occurred in the proliferative zones of the telencephalon, the optic tectum, cerebellum, and medulla of a trout within 2 days after the injury. We have shown that the HuC/D expression is higher in the proliferative brain regions than in the definitive neurons of a trout. In addition, we have examined cell proliferation, migration, and apoptosis caused by the eye injury in the contra- and ipsilateral optic nerves and adjacent muscle fibers 2 days after the trauma. The qualitative and quantitative assessment of proliferation and apoptosis in the cells of the optic nerve of a trout has been made using antibodies against PCNA and the TUNEL method. PMID:27149746

  10. Teratological hermaphroditism in the chum salmon Oncorhynchus keta (Walbaum)

    USGS Publications Warehouse

    Uzmann, J.R.; Hesselholt, M.N.

    1957-01-01

    The anomalous condition of hermaphroditism appears to be no less rare in fish than in other normally dioecious animals. Previous records of bisexuality' in the Pacific salmons, Oncorhynchus spp., are few in number despite the intensive study accorded this group. Rutter (1902) reported the condition in two king salmon (O. tshawytscha); Crawford (1927) reported the condition in a silver salmon (O. kisutch); and Gibbs (1956) described a bisexual steelhead trout (Salmo gairdneri) and briefly noted another instance of hermaphroditism in the king salmon. We wish to record an example of this anomaly in the chum salmon (O. keta).

  11. Spring Outmigration of Wild and Hatchery Chinook Salmonid Steelhead Trout Smolts from the Imnaha River, Oregon; 1995 Annual Report.

    SciTech Connect

    Blenden, Michael L.; Kucera, Paul A.; Osborne, Randall S.

    1996-04-01

    For the second consecutive year, the Nez Perce Tribe, in conjunction with the Fish Passage Center, participated in the smolt monitoring program in the Imnaha River. A rotary screw trap was used to collect emigrating wild and hatchery chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) smolts from February 6 to June 20, 1995. We PIT tagged and released 421 wild chinook salmon smolts, 747 hatchery chinook salmon smolts (445 HxW and 302 HxH), 227 wild steelhead trout smolts and 1,296 hatchery steelhead trout smolts. Cumulative interrogation rates at mainstem Snake and Columbia River dams were 78.4% for wild chinook salmon, 58.9% for hatchery chinook salmon (HxW), 56.6% for hatchery chinook salmon (HxH), 76.2% for wild steelhead trout, and 69.2% for hatchery steelhead trout. Peak outmigration of NPT tagged wild Imnaha River chinook salmon smolts occurred from early to mid-May at Lower Granite, Little Goose, and Lower Monumental Dams. Median and 90% passage dates for wild chinook salmon smolts at Lower Granite Dam were May 1 and May 11, respectively. Continuous spill at Lower Granite Dam was initiated on May 3 and lasted for 51 days. The 90% passage date of wild chinook salmon smolts at Lower Granite Dam (May 11) preceded peak Snake River and Lower Granite (June 6) flows by 26 days. Although hatchery chinook salmon exhibited a shorter outmigration period through the Snake River than their wild counterparts, peak arrival for both groups occurred at approximately the same time. Median and 90% passage dates at Lower Granite Dam for other PIT tagged groups were: hatchery chinook salmon (NPT-HxW) - May 2 and May 13; hatchery chinook salmon (FPC-HxH) - May 8 and May 15; wild steelhead trout - May 2 and May 9; and hatchery steelhead trout (NPT and FPC) - May 31 and June 16. Hatchery steelhead trout displayed small peaks in arrival timing at Lower Granite and Little Goose Dams in mid-May to mid-June.

  12. Effectiveness and retention of thiamine and its analogs administered to steelhead and landlocked Atlantic salmon

    USGS Publications Warehouse

    Ketola, H.G.; Isaacs, G.R.; Robins, J.S.; Lloyd, R.C.

    2008-01-01

    We investigated the feasibility of enhancing the reproduction of steelhead Oncorhynchus mykiss and landlocked Atlantic salmon Salmo salar in lakes where the consumption of alewives Alosa pseudoharengus and other forage fishes containing thiaminase can cause them to become thiamine deficient and thereby reduce the survival of their fry. We evaluated feeding fingerling steelhead excess thiamine hydrochloride (THCl) for 1 or 2 weeks or equimolar amounts of thiamine mononitrate, thiamine-tetrahydrofurfuryl-disulfide, benfotiamine, or dibenzoyl thiamine (DBT). We found minimal internal reserves of thiamine after 6 months. We also compared the ability of injections of thiamine and its analogs to prevent mortality in thiamine-deficient steelhead and Atlantic salmon sac fry and found all forms to be effective, although benfotiamine was the least effective on an equimolar basis. Further, we injected yearling steelhead and found that DBT was tolerated at approximately 11,200 nmol/g of body weight, about 10 times more than thiamine in any other form. When yearling steelhead were injected with near-maximal doses of thiamine hydrochloride and several analogs and then fed a thiamine-deficient diet, DBT was retained for approximately 2 years - in contrast to other forms, which were retained for less than about 6 months. Therefore, these results suggest that neither feeding nor injecting young hatchery salmonids with DBT is likely to enhance their reproduction for more than 2 years after stocking. However, injecting DBT in nearly mature fish (either cultured fish from hatcheries or wild fish captured in lakes) may provide them with enough thiamine to successfully spawn within 2 years even though they consume mainly thiaminase-containing forage fishes. ?? Copyright by the American Fisheries Society 2008.

  13. Bigger is not always better for overwintering young-of-year steelhead

    USGS Publications Warehouse

    Connolly, P.J.; Petersen, J.H.

    2003-01-01

    Many fishes occur across broad ranges of latitude and elevation, where winter temperatures can vary from mild to harsh. We conducted a laboratory experiment with three sizes of age-0 steelhead Oncorhynchus mykiss to examine growth, condition, and energy reserves under low rations at three levels of water temperature typical of this species' distribution during winter. At the end of the 111-d experiment, all three starting sizes of age-0 steelhead (small, 2-3 g; medium, 3-4 g; large, 4-5 g) held in 3??C water had lower total lipid weight than those held in 6??C and 9??C water. Large fish had higher total lipid weight than small fish at the onset of the experiment and retained higher amounts at the end. However, large fish had either the lowest percentage increases or the highest percentage decreases in fork length, biomass, condition factor, total lipid weight, and percent lipids within all thermal treatments. The magnitude of the differences between small and large fish was highest in the warmest (9??C) water. We used bioenergetics simulations of juvenile steelhead growth to examine fish response to initial size, winter temperature, and food availability. Relatively warm water temperatures in winter, coupled with limited food availability, may present more of a physiological challenge to larger age-0 steelhead than to smaller fish. Our results suggest that achievement of large size before the start of a steelhead's first winter can have a cost under episodic conditions found across the wide ranges of latitude and elevation within this species' distribution.

  14. Evaluation of Juvenile Fish Bypass and Adult Fish Facilities at Water Diversions in the Umatilla River; 1992 Annual Report.

    SciTech Connect

    Knapp, Suzanne M.

    1993-03-01

    We report on our progress from October 1991 through September 1992 in evaluating juvenile fish bypass facilities at Three Mile Falls and Westland dams on the Umatilla River. We also report on our progress from October 1991 through June 1992 in evaluating adult fish passage in the lower Umatilla River and adult fish passage facilities at Three Mile Falls Dam. The study is a cooperative effort by the Oregon Department of Fish and Wildlife (ODFW) and the Confederated Tribes of the Umatilla Indian Reservation (CTUIR). These are the study objectives addressed by ODFW and CTUIR: (1) Report A (ODFW): To evaluate the juvenile fish bypass facility in the West Extension Irrigation District Canal at Three Mile Falls Dam and document juvenile salmonid passage through the juvenile fish bypass facility and east-bank adult fish ladder. To measure velocity and develop trap designs at Westland Dam. (2) Report B (CTUIR): To examine the passage of adult salmonids at Three Mile Falls Dam. The study is part of a program to rehabilitate anadromous fish stocks in the Umatilla River Basin, including restoration of coho salmon (Oncorhynchus kisutch) and chinook salmon (Oncorhynchus tshawytscha), as well as enhancement of summer steelhead (Oncorhynchus mykiss).

  15. Trapping and Transportation of Adult and Juvenile Salmon in the Lower Umatilla River in Northeast Oregon, 1995-1996 : Umatilla River Basin Trap and Haul Program : Annual Progress Report, October 1995-September 1996.

    SciTech Connect

    Zimmerman, Brian C.; Duke, Bill B.

    1996-09-01

    Threemile Falls Dam (Threemile Dam), located near the town of Umatilla, is the major collection and counting point for adult salmonids returning to the Umatilla River. Returning salmon and steelhead were collected at Threemile Dam from September 5, 1995 to July 1, 1996. A total of 2,081 summer steelhead (Oncorhynchus mykiss); 603 adult, 288 jack, and 338 subjack fall chinook (O. tshawytscha); 946 adult and 53 jack coho (O. kisutch); and 2,152 adult and 121 jack spring chinook (O. tshawytscha) were collected. All fish were trapped at the east bank facility. The Westland Canal juvenile facility (Westland), located near the town of Echo at rivermile (RM) 27, is the major collection point for outmigrating juvenile salmonids and steelhead kelts. The Threemile Dam west bank juvenile bypass was operated from September 8 to October 13, 1995 and from March 18 to June 30, 1996. The juvenile trap was operated from July 1 to July 11. Daily operations at the facility were conducted by the ODFW Fish Passage Research project to monitor juvenile outmigration.

  16. Sensitivity and specificity of histology for diagnoses of four common pathogens and detection of nontarget pathogens in adult Chinook salmon (Oncorhynchus tshawytscha) in fresh water.

    PubMed

    Kent, Michael L; Benda, Susan; St-Hilaire, Sophie; Schreck, Carl B

    2013-05-01

    Histology is often underutilized in aquatic animal disease screening and diagnostics. The agreement between histological classifications of infection and results using diagnostic testing from the American Fisheries Society's Blue Book was conducted with 4 common salmon pathogens: Aeromonas salmonicida, Renibacterium salmoninarum, Ceratomyxa shasta, and Nanophyetus salmincola. Adult Chinook salmon (Oncorhynchus tshawytscha) in Oregon were evaluated, and agreement between tests was calculated. Live and dead (both pre- and postspawning) salmon were collected from the Willamette River, Oregon, its tributaries, the Willamette Hatchery, and after holding in cool, pathogen-free water during maturation at Oregon State University. Sensitivity and specificity of histology compared to Blue Book methods for all fish, live fish only, and dead (pre- and postspawned combined) fish only were, respectively, as follows: A. salmonicida (n = 105): specificity 87.5%, 87.5%, 87.5% and sensitivity 38.6%, 14.8%, 60.0%; R. salmoninarum (n = 111): specificity 91.9%, 85.7%, 97.7% and sensitivity 16.0%, 7.1%, 27.2%; C. shasta (n = 136): specificity 56.0%, 63.3%, 28.6% and sensitivity 83.3%, 86.2%, 71.4%; N. salmincola (n = 228): specificity 68.2%, 66.7%, not possible to calculate for dead fish and sensitivity 83.5%, 80.5%, 87.3%. The specificity was good for bacterial pathogens. This was not the case for C. shasta, likely due to detection of presporogenic forms only by histology. Sensitivity of histology for bacterial pathogens was low with the exception of dead fish with A. salmonicida. Kappa analysis for agreement between Blue Book and histology methods was poor to moderate. However, histological observations revealed the presence of other pathogens that would not be detected by other methods. PMID:23536613

  17. Escapement and Productivity of Spring Chinook Salmon and Summer Steelhead in the John Day River Basin, 2005-2006 Annual Technical Report.

    SciTech Connect

    Schultz, Terra Lang; Wilson, Wayne H.; Ruzycki, James R.

    2009-04-10

    The objectives are: (1) Estimate number and distribution of spring Chinook salmon Oncorhynchus tshawytscha redds and spawners in the John Day River subbasin; and (2) Estimate smolt-to-adult survival rates (SAR) and out-migrant abundance for spring Chinook and summer steelhead O. mykiss and life history characteristics of summer steelhead. The John Day River subbasin supports one of the last remaining intact wild populations of spring Chinook salmon and summer steelhead in the Columbia River Basin. These populations, however, remain depressed relative to historic levels. Between the completion of the life history and natural escapement study in 1984 and the start of this project in 1998, spring Chinook spawning surveys did not provide adequate information to assess age structure, progeny-to-parent production values, smolt-to-adult survival (SAR), or natural spawning escapement. Further, only very limited information is available for steelhead life history, escapement, and productivity measures in the John Day subbasin. Numerous habitat protection and rehabilitation projects to improve salmonid freshwater production and survival have also been implemented in the basin and are in need of effectiveness monitoring. While our monitoring efforts outlined here will not specifically measure the effectiveness of any particular project, they will provide much needed background information for developing context for project-specific effectiveness monitoring efforts. To meet the data needs as index stocks, to assess the long-term effectiveness of habitat projects, and to differentiate freshwater and ocean survival, sufficient annual estimates of spawner escapement, age structure, SAR, egg-to-smolt survival, smolt-per-redd ratio, and freshwater habitat use are essential. We have begun to meet this need through spawning ground surveys initiated for spring Chinook salmon in 1998 and smolt PIT-tagging efforts initiated in 1999. Additional sampling and analyses to meet these goals

  18. Biotic and abiotic influences on abundance and distribution of nonnative Chinook salmon and native ESA-listed steelhead in the Wind River, Washington

    USGS Publications Warehouse

    Jezorek, Ian G.; Connolly, Patrick J.

    2015-01-01

    Biotic and abiotic factors influence fish populations and distributions. Concerns have been raised about the influence of hatchery fish on wild populations. Carson National Fish Hatchery produces spring Chinook salmon Oncorhynchus tshawytscha in the Wind River, Washington, and some spawn in the river. Managers were concerned that Chinook salmon could negatively affect wild steelhead O. mykiss and that a self-sustaining population of Chinook salmon may develop. Our objectives were to assess: 1) the distribution and populations of juvenile spring Chinook salmon and juvenile steelhead in the upper Wind River; 2) the influence of stream flow and of each population on the other; and 3) if Chinook salmon populations were self-sustaining. We snorkeled to determine distribution and abundance. Flow in the fall influenced upstream distribution and abundance of juvenile Chinook salmon. Juvenile Chinook salmon densities were consistently low (range 0.0 to 5.7 fish 100 m-2) and not influenced by number of spawners, winter flow magnitude, or steelhead abundance. Juvenile steelhead were distributed through the study section each year. Age-0 and age-1 steelhead densities (age-0 range: 0.04 to 37.0 fish 100 m-2; age-1 range: 0.02 to 6.21 fish 100 m-2) were consistently higher than for juvenile Chinook salmon. Steelhead spawner abundance positively influenced juvenile steelhead abundance. During this study, Chinook salmon in the Wind River appear to have had little effect on steelhead. Low juvenile Chinook salmon abundance and a lack of a spawner-to-juvenile relationship suggest Chinook salmon are not self-sustaining and potential for such a population is low under current conditions.

  19. Characterize and Quantify Residual Steelhead in the Clearwater River, Idaho, 2000 Annual Report.

    SciTech Connect

    Larsen, Chris A.; Bigelow, Patricia E.; Faler, Michael P.

    2003-03-01

    We tagged 4,507 hatchery steelhead from Dworshak National Fish Hatchery (NFH), with Passive Integrated Transponder (PIT) tags to evaluate factors contributing to residualism. Steelhead lengths from typical growth ponds (System I) averaged 7mm less than those in faster growth ponds (System II) and travel times were 2 days faster. Steelhead were released into Clear Creek, South Fork Clearwater River, and from Dworshak NFH, and detection rates were 54.8%, 60.0% and 58.8%, respectively. The mean detection rates of steelhead analyzed by rearing system were, 51.5%, 59.8%, and 61.8% for System III, System I, and System II, respectively. We PIT tagged an additional 1,302 hatchery steelhead in the North Fork and mainstem Clearwater rivers between April 10 and August 28. Only 73 of these PIT-tagged steelhead were detected at a downstream dam and none were detected after June 14. In the 4 tributaries sampled, 77 steelhead were PIT tagged and released, 35.1% of which were detected emigrating downstream. Steelhead which were sacrificed for coded-wire tag information were also checked for sexual maturity. A total of 302 coded-wire tags were recovered; 87 from the Clearwater River, 119 from the North Fork Clearwater River, 80 from the Dworshak NFH adult return ladder, and 77 from the 4 tributaries. The precocious rate in males was 83.3% to 1.5% in females and the gender ratio was 79.8% males to 20.2% females. Although sample sizes were small, we were able to verify that at least one residual steelhead survived the winter to persist in the Clearwater River. Based on this years data, the majority of steelhead, which do not emigrate during the first couple of weeks after release, are unlikely to emigrate. Final analysis will also include influences of water flow and temperature in emigration success. This information needs to be compared over several years (at least three) for meaningful analysis.

  20. Evaluation of angler reporting accuracy in an off-site survey to estimate statewide steelhead harvest

    USGS Publications Warehouse

    McCormick, J. L.; Whitney, D.; Schill, D. J.; Quist, Michael

    2015-01-01

    Accuracy of angler-reported data on steelhead, Oncorhynchus mykiss (Walbaum), harvest in Idaho, USA, was quantified by comparing data recorded on angler harvest permits to the numbers that the same group of anglers reported in an off-site survey. Anglers could respond to the off-site survey using mail or Internet; if they did not respond using these methods, they were called on the telephone. A majority of anglers responded through the mail, and the probability of responding by Internet decreased with increasing age of the respondent. The actual number of steelhead harvested did not appear to influence the response type. Anglers in the autumn 2012 survey overreported harvest by 24%, whereas anglers in the spring 2013 survey under-reported steelhead harvest by 16%. The direction of reporting bias may have been a function of actual harvest, where anglers harvested on average 2.6 times more fish during the spring fishery than the autumn. Reporting bias that is a function of actual harvest can have substantial management and conservation implications because the fishery will be perceived to be performing better at lower harvest rates and worse when harvest rates are higher. Thus, these findings warrant consideration when designing surveys and evaluating management actions.

  1. Operation of the Lower Granite Dam Adult Trap, 2008.

    SciTech Connect

    Harmon, Jerrel R.

    2009-01-01

    During 2008 we operated the adult salmonid trap at Lower Granite Dam from 7 March through 25 November, except during a short summer period when water temperatures were too high to safely handle fish. We collected and handled a total of 20,463 steelhead Oncorhynchus mykiss and radio-tagged 34 of the hatchery steelhead. We took scale samples from 3,724 spring/summer Chinook salmon O. tshawytscha for age and genetic analysis. We collected and handled a total of 8,254 fall Chinook salmon. Of those fish, 2,520 adults and 942 jacks were transported to Lyons Ferry Hatchery on the Snake River in Washington. In addition, 961 adults and 107 jacks were transported to the Nez Perce Tribal Hatchery on the Clearwater River in Idaho. The remaining 3,724 fall Chinook salmon were passed upstream. Scales samples were taken from 780 fall Chinook salmon tagged with passive integrated transponder (PIT) tags and collected by the sort-by-code system.

  2. Residence times and diel passage distributions of radio-tagged juvenile spring chinook salmon and steelhead in a gatewell and fish collection channel of a Columbia River Dam

    USGS Publications Warehouse

    Beeman, J.W.; Maule, A.G.

    2001-01-01

    The amount of time radio-tagged juvenile spring chinook salmon Oncorhynchus tshawytscha and juvenile steelhead O. mykiss spent within a gatewell and the juvenile collection channel at McNary Dam, Columbia River, USA, was measured to determine the diel passage behavior and residence times within these portions of the juvenile bypass system. The median gatewell residence times were 8.9 h for juvenile chinook salmon and 3.2 h for steelhead. Juvenile spring chinook salmon spent 83% of their time in the 18-m-deep gatewell at depths of 9 m or less, and juvenile steelhead spent 96% of their time in the upper 11 m. Fish released during midday and those released in the evening generally exited the gatewell in the evening, indicating that fish entering the gatewell during daylight will have prolonged residence times. Median collection-channel residence times of juvenile chinook salmon were much shorter (2.3 min) than those of steelhead (28.0 min), most likely because of the greater size of the steelhead and the high water velocities within the channel (2.1 m/s). This and other studies indicate most juvenile salmonids enter gatewells of several Columbia and Snake river dams in the evening and pass into the collection channels quickly. However, this is not consistent with the natural in-river migration patterns of these species and represents a delay in dam passage.

  3. Intensive Evaluation and Monitoring of Chinook Salmon and Steelhead Trout Production, Crooked River and Upper Salmon River Sites, 1994 Annual Report.

    SciTech Connect

    Kiefer, Russell B.; Lockhart, Jerald N.

    1997-06-01

    The purpose of this intensive monitoring project is to determine the number of returning chinook and steelhead adults necessary to achieve optimal smolt production, and develop mitigation accounting based on increases in smolt production. Two locations in Idaho are being intensively studied to meet these objectives. Information from this research will be applied to parr monitoring streams statewide to develop escapement objectives and determine success of habitat enhancement projects. This project to date has developed good information on the relationship between adult chinook salmon escapement and smolt production at low to medium seeding levels. This information for steelhead includes a fair estimate of carrying capacity. To date, we have been unable to accurately estimate egg-to-parr survival for steelhead. Future efforts will include determining the relationship between adult steelhead trout escapement and age 1 + parr production, determining environmental and habitat factors that affect smolt production, and developing project results to help the region make good management decisions for anadromous fish.

  4. Evaluation of Juvenile Fish Bypass and Adult Fish Passage Facilities at Water Diversions on the Umatilla River; 1994 Annual Report.

    SciTech Connect

    Knapp, Suzanne M.

    1995-01-01

    We report on our progress from October 1993 through September 1994 in evaluating juvenile salmonid bypass facilities and juvenile salmonid passage through ladder facilities, and investigating passage conditions for juvenile fish at diversion dam facilities on the lower Umatilla River in northeastern Oregon. We also report on our progress in evaluating adult salmonid passage at and between dams on the lower Umatilla River and upriver migration using radio telemetry. Two principal studies are also included. Report A (ODFW): To evaluate the juvenile salmonid bypass facilities a Feed and Furnish canals, juvenile salmonid passage through fish ladders at Stanfield, Feed Canal, Westland, and Three Mile Falls dams, and the juvenile salmonid trap and haul procedures at Westland Canal. To investigate passage conditions at all passage facilities. Report B (CTUIR): To examine the passage of adult salmonids past diversions in the lower Umatilla River and their movement in the upper river after transport, using radio telemetry, and to assess factors for successful homing. These studies are part of a program to rehabilitate anadromous fish stocks in the Umatilla River Basin, including restoration of coho salmon (Oncorhynchus kisutch) and chinook salmon (Oncorhynchus tshawytscha), as well as enhancement of summer steelhead (Oncorhynchus mykiss).

  5. Smolt Monitoring Program, Volume II, Migrational Characteristics of Columbia Basin Salmon and Steelhead Trout, 1986 Annual Report.

    SciTech Connect

    Fish Passage Center

    1987-02-01

    Smolt Monitoring Program Annual Report, 1986, Volume I, describes the results of travel time monitoring and other migrational characteristics of yearling and sub-yearling chinook salmon (Oncorhynchus tshawytscha), sockeye salmon (Oncorhynchus nerka), and steelhead trout (Salmo gairdneri). This volume presents the data from Fish Passage Center freeze brands used in the analysis of travel time for Lewiston, Lower Granite, Lower Monumental, Rock Island, McNary, and John Day dams. Summary of data collection procedures and explanation of data listings are presented in conjunction with the mark recapture data. Data for marked fish not presented in this report will be provided upon request. Daily catch statistics (by species), flow, and sample parameters for the smolt monitoring sites, Clearwater, Lewiston, Lower Granite, Lower Monumental, Rock Island, McNary, John Day, and Bonneville also will be provided upon request.

  6. A comparison of susceptibility to Myxobolus cerebralis among strains of rainbow trout and steelhead in field and laboratory trials

    USGS Publications Warehouse

    Densmore, Christine L.; Blazer, V.S.; Cartwright, Deborah D.; Schill, W.B.; Schachte, J.H.; Petrie, C.J.; Batur, M.V.; Waldrop, T.B.; Mack, A.; Pooler, P.S.

    2001-01-01

    Three strains of rainbow trout and steelhead Oncorhynchus mykiss were evaluated for the presence of whirling disease in field and laboratory trials. In the field exposures, fingerling Salmon River steelhead and Cayuga Lake and Randolph strains of rainbow trout were placed in wire cages in an earthen, stream-fed pond in New York State that was known to harbor Myxobolus cerebralis. Control fish were held at another hatchery that was free of whirling disease. In the controlled trials at the National Fish Health Research Laboratory, fingerling steelhead and Cayuga Lake and Mount Lassen rainbow trout were exposed to triactinomyxons at low (200 triactinomyxons/fish) or high (2,000 triactinomyxons/fish) levels for 2 h. Controls of each group were sham-exposed. Following an incubation period of 154 d for laboratory trials and 180 d for field trials, cranial tissue samples were taken for spore enumeration (field and laboratory trials) and histological analyses (laboratory only). Clinical signs of disease, including whirling behavior, blacktail, and skeletal deformities, were recorded for each fish in the laboratory trial at the terminal sampling. No clinical evidence of disease was noted among fish in the field trials. Clinical signs were noted among all strains in the laboratory trials at both exposure levels, and these signs were consistently greatest for the Mount Lassen strain. Whirling and skeletal deformities were more evident in the steelhead than in the Cayuga Lake rainbow trout; blacktail was more common in the Cayuga Lake fish. In both field and laboratory trials, spore counts were significantly higher for Cayuga Lake rainbow trout than in steelhead. In laboratory trials, moderate to marked cranial tissue lesions predominated in all three strains.

  7. Effect of incubation temperature on post-embryonic survival and growth of steelhead in a natural stream and a hatchery (Study sites: Dworshak Hatchery and North Fork Palouse River; Stocks: Dworshak hatchery; Year classes: 1994 and 1995): Chapter 5

    USGS Publications Warehouse

    Rubin, Stephen P.; Reisenbichler, Reginald R.; Wetzel, Lisa A.; Stenberg, Karl D.; Baker, Bruce M.

    2012-01-01

    We tested whether varying incubation temperatures to match development between embryos from different spawning dates affected survival and growth of unfed steelhead Oncorhynchus mykiss fry released in a stream and in hatchery ponds. Hatchery steelhead returning to the Clearwater River, Idaho were artificially spawned on two dates separated by a four week interval. Progeny from the early date (ExE, from early males and early females) were incubated in chilled (7°C) water and those from the late date (LxL) in ambient (12°C) water until developmental stage matched. A third group, created by fertilizing eggs from late females with cryopreserved milt from early males (ExL), was included to control for any genetic differences between early and late returning adults. Survival in the stream to 3 and 15 months after release was similar among crosses. Survival in the hatchery to near the end of the standard one year rearing period was similar among crosses for one of two year - classes but different for the other; however, it was difficult to ascribe the differences (ExL>ExE; LxL intermediate but closer to ExE) to incubation temperature differences. We conclude that there was little if any effect of incubation temperature on survival. Length of juveniles of one year - class differed among crosses in the stream and in the hatchery. Length of the other year - class differed among crosses in one pond at the hatchery but not in the other pond or in the stream. When length differed the pattern was always the same: ExE>LxL; ExL intermediate but closer to LxL. We speculate that incubation temperature may have affected growth of juveniles, and in particular that a longer period of incubation in chilled water may have caused fast juvenile growth relative to a shorter incubation period in ambient water.

  8. Performance of a surface bypass structure to enhance juvenile steelhead passage and survival at Lower Granite Dam, Washington

    USGS Publications Warehouse

    Adams, Noah S.; Plumb, John M.; Perry, Russell W.; Rondorf, Dennis W.

    2014-01-01

    An integral part of efforts to recover stocks of Pacific salmon Oncorhynchus spp. and steelhead O. mykiss in Pacific Northwest rivers is to increase passage efficacy and survival of juveniles past hydroelectric dams. As part of this effort, we evaluated the efficacy of a prototype surface bypass structure, the removable spillway weir (RSW), installed in a spillbay at Lower Granite Dam, Washington, on the Snake River during 2002, 2003, 2005, and 2006. Radio-tagged juvenile steelhead were released upstream from the dam and their route of passage through the turbines, juvenile bypass, spillway, or RSW was recorded. The RSW was operated in an on-or-off condition and passed 3–13% of the total discharge at the dam when it was on. Poisson rate models were fit to the passage counts of hatchery- and natural-origin juvenile steelhead to predict the probability of fish passing the dam. Main-effect predictor variables were RSW operation, diel period, day of the year, proportion of flow passed by the spillway, and total discharge at the dam. The combined fish passage through the RSW and spillway was 55–85% during the day and 37–61% during the night. The proportion of steelhead passing through nonturbine routes was <88% when the RSW was off during the day and increased to >95% when the RSW was on during the day. The ratio of the proportion of steelhead passed to the proportion of water passing the RSW was from 6.3:1 to 10.0:1 during the day and from 2.7:1 to 5.2:1 during the night. Steelhead passing through the RSW exited the tailrace about 15 min faster than fish passing through the spillway. Mark–recapture single-release survival estimates for steelhead passing the RSW ranged from 0.95 to 1.00. The RSW appeared to be an effective bypass structure compared with other routes of fish passage at the dam.

  9. Analysis of Salmon and Steelhead Supplementation, 1990 Final Report.

    SciTech Connect

    Miller, William H.; Coley, Travis C.; Burge, Howard L.

    1990-09-01

    Supplementation or planting salmon and steelhead into various locations in the Columbia River drainage has occurred for over 100 years. All life stages, from eggs to adults, have been used by fishery managers in attempts to establish, rebuild, or maintain anadromous runs. This report summarizes and evaluates results of past and current supplementation of salmon and steelhead. Conclusions and recommendations are made concerning supplementation. Hatchery rearing conditions and stocking methods can affect post released survival of hatchery fish. Stress was considered by many biologists to be a key factor in survival of stocked anadromous fish. Smolts were the most common life stage released and size of smolts correlated positively with survival. Success of hatchery stockings of eggs and presmolts was found to be better if they are put into productive, underseeded habitats. Stocking time, method, species stocked, and environmental conditions of the receiving waters, including other fish species present, are factors to consider in supplementation programs. The unpublished supplementation literature was reviewed primarily by the authors of this report. Direct contact was made in person or by telephone and data compiled on a computer database. Areas covered included Oregon, Washington, Idaho, Alaska, California, British Columbia, and the New England states working with Atlantic salmon. Over 300 projects were reviewed and entered into a computer database. The database information is contained in Appendix A of this report. 6 refs., 9 figs., 21 tabs.

  10. Rearing in a distorted magnetic field disrupts the ‘map sense’ of juvenile steelhead trout

    PubMed Central

    Putman, Nathan F.; Meinke, Amanda M.; Noakes, David L. G.

    2014-01-01

    We used simulated magnetic displacements to test orientation preferences of juvenile steelhead trout (Oncorhynchus mykiss) exposed to magnetic fields existing at the northernmost and southernmost boundaries of their oceanic range. Fish reared in natural magnetic conditions distinguished between these two fields by orienting in opposite directions, with headings that would lead fish towards marine foraging grounds. However, fish reared in a spatially distorted magnetic field failed to distinguish between the experimental fields and were randomly oriented. The non-uniform field in which fish were reared is probably typical of fields that many hatchery fish encounter due to magnetic distortions associated with the infrastructure of aquaculture. Given that the reduced navigational abilities we observed could negatively influence marine survival, homing ability and hatchery efficiency, we recommend further study on the implications of rearing salmonids in unnatural magnetic fields. PMID:24899681

  11. Investigations into the Early Life History of Naturally Produced Spring Chinook Salmon and Summer Steelhead in the Grande Ronde River Subbasin, Annual Report 2008 : Project Period 1 February 2008 to 31 January 2009.

    SciTech Connect

    Yanke, Jeffrey A.; Alfonse, Brian M.; Bratcher, Kyle W.

    2009-07-31

    This study was designed to document and describe the status and life history strategies of spring Chinook salmon and summer steelhead in the Grande Ronde River Subbasin. We determined migration timing, abundance, and life-stage survival rates for juvenile spring Chinook salmon Oncorhynchus tshawytscha and summer steelhead O. mykiss in four streams during migratory year 2008 from 1 July 2007 through 30 June 2008. As observed in previous years of this study, spring Chinook salmon and steelhead exhibited fall and spring movements out of natal rearing areas, but did not begin their smolt migration through the Snake and lower Columbia River hydrosystem until spring. In this report we provide estimates of migrant abundance and migration timing for each study stream, and their survival and timing to Lower Granite Dam. We also document aquatic habitat conditions using water temperature and stream flow in four study streams in the subbasin.

  12. Floodplain rehabilitation as a hedge against hydroclimatic uncertainty in a migration corridor of threatened steelhead.

    PubMed

    Boughton, David A; Pike, Andrew S

    2013-12-01

    A strategy for recovering endangered species during climate change is to restore ecosystem processes that moderate effects of climate shifts. In mid-latitudes, storm patterns may shift their intensity, duration, and frequency. These shifts threaten flooding in human communities and reduce migration windows (conditions suitable for migration after a storm) for fish. Rehabilitation of historic floodplains can in principle reduce these threats via transient storage of storm water, but no one has quantified the benefit of floodplain rehabilitation for migrating fish, a widespread biota with conservation and economic value. We used simple models to quantify migration opportunity for a threatened migratory fish, steelhead (Oncorhynchus mykiss), in an episodic rain-fed river system, the Pajaro River in central California. We combined flow models, bioenergetic models, and existing climate projections to estimate the sensitivity of migration windows to altered storm patterns under alternate scenarios of floodplain rehabilitation. Generally, migration opportunities were insensitive to warming, weakly sensitive to duration or intensity of storms, and proportionately sensitive to frequency of storms. The rehabilitation strategy expanded migration windows by 16-28% regardless of climate outcomes. Warmer conditions raised the energy cost of migrating, but not enough to matter biologically. Novel findings were that fewer storms appeared to pose a bigger threat to migrating steelhead than warmer or smaller storms and that floodplain rehabilitation lessened the risk from fewer or smaller storms across all plausible hydroclimatic outcomes. It follows that statistical downscaling methods may mischaracterize risk, depending on how they resolve overall precipitation shifts into changes of storm frequency as opposed to storm size. Moreover, anticipating effects of climate shifts that are irreducibly uncertain (here, rainfall) may be more important than anticipating effects of relatively

  13. Imprinting Salmon and Steelhead Trout for Homing, 1981 Annual Report of Research.

    SciTech Connect

    Slatick, Emil

    1982-09-01

    The National Marine Fisheries Service, under contract to the Bonneville Power Administration, began conducting research on imprinting Pacific salmon and steelhead for homing in 1978. The juvenile marking phase was completed in 1980; over 4 million juvenile salmon and steelhead were marked and released in 23 experiments. The primary objectives were to determine: (1) a triggering mechanism to activate the homing imprint, (2) if a single imprint or a sequential imprint is necessary to assure homing, and (3) the relationship between the physiological condition of fish and their ability to imprint. Research in 1981 concentrated on: (1) recovering returning adults from previous experiments, (2) analyzing completed 1978 steelhead and 1980 coho salmon experiments, and (3) preliminary analyzing 1979 and 1980 fall chinook salmon experiments. Seven experimental groups are discussed: four steelhead, two fall chinook salmon, and one coho salmon. In four groups, survival was enhanced by the imprinting-transportation procedures. Homing back to the hatchery area was successful in two groups, and generally, unless there were extenuating circumstances (eruption of Mount St. Helens, disease problem, etc.), greater returns to user groups were evident.

  14. Imprinting Salmon and Steelhead Trout for Homing, 1982 Annual Report of Research.

    SciTech Connect

    Slatick, Emil

    1983-11-01

    The National Marine Fisheries Service, under contract to the Bonneville Power Administration, began conducting research on imprinting Pacific salmon and steelhead for homing in 1978. The juvenile marking phase was completed in 1980; over 4 million juvenile salmon and steelhead were marked and released in 23 experiments. The primary objectives were to determine; (1) a triggering mechanism to activate the homing imprint, (2) if a single imprint or a sequential imprint is necessary to assure homing, and (3) the relationship between the physiological condition of fish and their ability to imprint. Research in 1982 concentrated on: (1) recovering returning adults from previous experiments, (2) analyzing completed 1979 steelhead and chinook salmon experiments, and (3) preliminarily analyzing 1980 fall chinook salmon experiments. Six experimental groups are discussed: two steelhead, two spring chinook salmon, and two fall chinook salmon. In four test groups, survival was enhanced by the imprinting-transportation procedures. Homing back to the hatchery area was partly successful in two test groups, and generally, unless there were extenuating circumstances (eruption of Mount St. Helens, disease problem, etc.), greater returns to user groups were evident.

  15. Integrated Status and Effectiveness Monitoring Program - Entiat River Rotary Screw Traps,Snorkel Surveys, and Steelhead Redd Surveys, 2008.

    SciTech Connect

    Nelle, R.D.; Desgroseiller, Tom; Cotter, Michael

    2009-02-17

    The USFWS Mid-Columbia River Fishery Resource Office (MCRFRO) operated two rotary screw traps on the Entiat River as part of the Integrated Status and Effectiveness Monitoring Program from March through November of 2008. Along with the smolt traps, juvenile emigrants were also captured at remote locations throughout the Entiat watershed and its major tributary, the Mad River. A total of 16,782 wild salmonids were PIT tagged during the study period. Of this, 3,961(23.6%) were wild Oncorhynchus mykiss, 6,987 (41.6%) were wild spring run O. tshawytscha, and 5,591 (33.3%) were identified as wild O. tshawytscha of unknown run. Rotary screw trap efficiencies averaged 40.3% at the upper (Rkm 11.0) trap and 7.8% for the lower (Rkm 2.0) trap. These efficiencies were pooled for emigrant O. tshawytscha and O. mykiss. The MCRFRO conducted effectiveness monitoring snorkel surveys at 24 sites during the winter period and 30 sites during the summer and fall periods of 2008 as part of the Integrated Status and Effectiveness Monitoring Program in the Entiat River. The 2008 steelhead spawning grounds surveys were conducted weekly in the main Entiat River from rkm 1.1 to 44.2. A total of 222 steelhead redds were identified over the period from February 28 to June 16 2008 with April being the peak spawning month. Approximately 80% of the steelhead redds were located downstream of the rkm 26.

  16. Integrated Status and Effectiveness Monitoring Program - Entiat River Rotary Screw Traps, Snorkel Surveys, and Steelhead Redd Surveys, 2008-2009.

    SciTech Connect

    Nelle, R.D.; Desgroseillier, Tom; Cotter, Michael

    2009-04-14

    The USFWS Mid-Columbia River Fishery Resource Office (MCRFRO) operated two rotary screw traps on the Entiat River as part of the Integrated Status and Effectiveness Monitoring Program from March through November of 2008. Along with the smolt traps, juvenile emigrants were also captured at remote locations throughout the Entiat watershed and its major tributary, the Mad River. A total of 16,782 wild salmonids were PIT tagged during the study period. Of this, 3,961(23.6%) were wild Oncorhynchus mykiss, 6,987 (41.6%) were wild spring run O. tshawytscha, and 5,591 (33.3%) were identified as wild O. tshawytscha of unknown run. Rotary screw trap efficiencies averaged 40.3% at the upper (Rkm 11.0) trap and 7.8% for the lower (Rkm 2.0) trap. These efficiencies were pooled for emigrant O. tshawytscha and O. mykiss. The MCRFRO conducted effectiveness monitoring snorkel surveys at 24 sites during the winter period and 30 sites during the summer and fall periods of 2008 as part of the Integrated Status and Effectiveness Monitoring Program in the Entiat River. The 2008 steelhead spawning grounds surveys were conducted weekly in the main Entiat River from rkm 1.1 to 44.2. A total of 222 steelhead redds were identified over the period from February 28 to June 16 2008 with April being the peak spawning month. Approximately 80% of the steelhead redds were located downstream of the rkm 26.

  17. Emigration of Natural and Hatchery Chinook Salmon and Steelhead Smolts from the Imnaha River, Oregon, 1998-1999 Annual Report.

    SciTech Connect

    Cleary, Peter J.; Blenden, Michael L.; Kucera, Paul A.

    2002-08-01

    This report summarizes the results of the Lower Snake River Compensation Plan Hatchery Evaluation Studies (LSRCP) and the Imnaha Smolt Monitoring Program (SMP) for the 1999 smolt migration from the Imnaha River, Oregon. These studies were designed and closely coordinated to provide information about juvenile natural and hatchery chinook salmon (Oncorhynchus tshawytscha) and steelhead (Oncorhynchus mykiss) biological characteristics, behavior and emigrant timing, survival, arrival timing and travel time to the Snake River dams and McNary Dam on the Columbia River. Data collected from these studies are shared with the Fish Passage Center (FPC). These data are essential to quantify smolt survival rates under the current passage conditions and to evaluate the future recovery strategies that seek to optimize smolt survival through the hydroelectric system. Information shared with the FPC assists with in-season shaping of flow and spill management requests in the Snake River reservoirs. The Bonneville Power Administration and the United States Fish and Wildlife Service contracted the Nez Perce Tribe (NPT) to monitor emigration timing and tag 21,200 emigrating natural and hatchery chinook salmon and steelhead smolts from the Imnaha River during the spring emigration period (March 1-June 15) with passive integrated transponder (PIT) tags. The completion of trapping in the spring of 1999 marked the eighth year of emigration studies on the Imnaha River and the sixth year of participating in the FPC smolt monitoring program. Monitoring and evaluation objectives were to: (1) Determine spring emigration timing of chinook salmon and steelhead smolts collected at the Imnaha River trap. (2) Evaluate effects of flow, temperature and other environmental factors on emigration timing. (3) Monitor the daily catch and biological characteristics of juvenile chinook salmon and steelhead smolts collected at the Imnaha River screw trap. (4) Determine emigration timing, travel time, and in

  18. Differences in Lateral Line Morphology between Hatchery- and Wild-Origin Steelhead

    PubMed Central

    Brown, Andrew D.; Sisneros, Joseph A.; Jurasin, Tyler; Nguyen, Chau; Coffin, Allison B.

    2013-01-01

    Despite identification of multiple factors mediating salmon survival, significant disparities in survival-to-adulthood among hatchery- versus wild-origin juveniles persist. In the present report, we explore the hypothesis that hatchery-reared juveniles might exhibit morphological defects in vulnerable mechanosensory systems prior to release from the hatchery, potentiating reduced survival after release. Juvenile steelhead (Oncorhynchus mykiss) from two different hatcheries were compared to wild-origin juveniles on several morphological traits including lateral line structure, otolith composition (a proxy for auditory function), and brain weight. Wild juveniles were found to possess significantly more superficial lateral line neuromasts than hatchery-reared juveniles, although the number of hair cells within individual neuromasts was not significantly different across groups. Wild juveniles were also found to possess primarily normal, aragonite-containing otoliths, while hatchery-reared juveniles possessed a high proportion of crystallized (vaterite) otoliths. Finally, wild juveniles were found to have significantly larger brains than hatchery-reared juveniles. These differences together predict reduced sensitivity to biologically important hydrodynamic and acoustic signals from natural biotic (predator, prey, conspecific) and abiotic (turbulent flow, current) sources among hatchery-reared steelhead, in turn predicting reduced survival fitness after release. Physiological and behavioral studies are required to establish the functional significance of these morphological differences. PMID:23554988

  19. Evaluation of Juvenile Fish Bypass and Adult Fish Passage Facilities at Three-Mile Falls Dam; Umatilla River, Oregon, 1989 Annual Report.

    SciTech Connect

    Nigro, Anthony A.

    1990-09-01

    We report on our progress from October 1989 through September 1990 on evaluating juvenile fish bypass and adult fish passage facilities at Three Mile Falls Dam on the Umatilla River. The study is a cooperative effort by the Oregon Department of Fish and Wildlife (ODFW) and the Confederated Tribes of the Umatilla Indian Reservation (CTUIR). Study objectives addressed by ODFW and CTUIR are: (1) ODFW (Report A): Operate and evaluate the juvenile fish bypass system in the West Extension Irrigation District canal at Three Mile Falls Dam; and (2) CTUIR (Report 8): Examine the passage of adult salmonids at Three Mile Falls Dam. The study is part of a program to rehabilitate anadromous fish stocks in the Umatilla River Basin that includes restorations of coho salmon Oncorhynchus Wsutch and chinook salmon 0. tshawytscha and enhancement of summer steelhead 0. mytiss.

  20. The effects of increased stream temperatures on juvenile steelhead growth in the Yakima River Basin based on projected climate change scenarios

    USGS Publications Warehouse

    Hardiman, Jill M.; Mesa, Matthew G.

    2013-01-01

    Stakeholders within the Yakima River Basin expressed concern over impacts of climate change on mid-Columbia River steelhead (Oncorhynchus mykiss), listed under the Endangered Species Act. We used a bioenergetics model to assess the impacts of changing stream temperatures—resulting from different climate change scenarios—on growth of juvenile steelhead in the Yakima River Basin. We used diet and fish size data from fieldwork in a bioenergetics model and integrated baseline and projected stream temperatures from down-scaled air temperature climate modeling into our analysis. The stream temperature models predicted that daily mean temperatures of salmonid-rearing streams in the basin could increase by 1–2°C and our bioenergetics simulations indicated that such increases could enhance the growth of steelhead in the spring, but reduce it during the summer. However, differences in growth rates of fish living under different climate change scenarios were minor, ranging from about 1–5%. Because our analysis focused mostly on the growth responses of steelhead to changes in stream temperatures, further work is needed to fully understand the potential impacts of climate change. Studies should include evaluating changing stream flows on fish activity and energy budgets, responses of aquatic insects to climate change, and integration of bioenergetics, population dynamics, and habitat responses to climate change.

  1. Hatchery Evaluation Report/Lyons Ferry Hatchery - Summer Steelhead : an Independent Audit Based on Integrated Hatchery Operations Team (IHOT) Performance Measures.

    SciTech Connect

    Watson, Montgomery.

    1996-05-01

    This report presents the findings of the independent audit of the Lyons Ferry Hatchery (Summer Steelhead). Lyons Ferry Hatchery is located downstream of the confluence of the Palouse and Snake rivers, about 7 miles west of Starbuck, Washington. The hatchery is used for adult collection of tall chinook and summer steelhead, egg incubation of fall chinook, spring chinook, steelhead, and rainbow trout and rearing of fall chinook, spring chinook, summer steelhead, and rainbow trout. The audit was conducted in April 1996 as part of a two-year effort that will include 67 hatcheries and satellite facilities located on the Columbia and Snake River system in Idaho, Oregon, and Washington. The hatchery operating agencies include the U.S Fish and Wildlife Service, Idaho Department of Fish and Game, Oregon Department of Fish and Wildlife, and Washington Department of Fish and Wildlife.

  2. Use of a Fish Transportation Barge for Increasing Returns of Steelhead Imprinted for Homing, 1983 Annual Report.

    SciTech Connect

    Harmon, Jerrel R.

    1984-03-01

    A study was conducted to determine if transporting steelhead, Salmo gairdneri, smolts by barge from Dworshak National Fish Hatchery to a release site in the Columbia River below Bonneville Dam would result in increased returns of adults to the fishery and hatchery. Eight separately identifiable groups of about 30,000 steelhead each were marked and released in 1982. During 1983, over 251,000 smolts were marked - about 30,000 fish for each of four test lots (barged) and four control lots (released into the Clearwater River near the hatchery). The health and status of smoltification of the juvenile fish were monitored from March to the release date for each group. The fish sampled were considered to be in good health and well advanced in smoltification at release. Fish from the control release were recovered at dams and in the estuary along their migration route. Approximately 29% of the fish from the control release were transported from collector dams (Lower Granite, Little Goose, and McNary) as part of the routine transportation program. The relatively large number of 1-ocean age adult steelhead (179) recovered at adult collector dams (Lower Granite, McNary, and Bonneville) and in the Indian fishery (Columbia River Zone 6) indicates a high survival of steelhead released as smolts in the spring of 1982. A large return of 2-ocean age adults is expected in 1984. 3 refs.

  3. Spring Emigration of Natural and Hatchery Chinook Salmon and Steelhead Trout Smolts from the Imnaha River, Oregon; 1997 Annual Report.

    SciTech Connect

    Blenden, Michael L.; Veach, Eric R.; Kucera, Paul A.

    1998-10-01

    For the fourth consecutive year, the Nez Perce Tribe, in conjunction with the Fish Passage Center, participated in the smolt monitoring program in the Imnaha River. A screw trap was used to collect emigrating natural and hatchery chinook salmon (Uncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) smolts from February 25 to June 27, 1997. A total of 270 natural chinook salmon, 10,616 hatchery chinook salmon, 864 natural steelhead trout (and 13 natural steelhead parr), and 7,345 hatchery steelhead trout smolts were captured during emigration studies on the Imnaha River. Mortality associated with trapping, handling and tagging was low: 0.37% for natural chinook, 0.11% for hatchery chinook, 0.11% for natural steelhead, and 0.39% for hatchery steelhead trout smolts. Natural chinook salmon smolts emigrated from the Imnaha River from February 25 to June 10 and had a mean length of 108 mm, average weight of 13 g, and mean condition factor of 1.02. The peak period of natural chinook smolt emigration, based on number of fish collected, occurred between March 25 and April 30. Hatchery reared chinook salmon smolts were collected from April 9 to May 9, with 99% of the smolts being caught within 10 days after release. Hatchery chinook smolts mean length, weight, and condition factor were 131 mm, 25.4 g, and 1.12, respectively. Emigration of natural steelhead smolts in the Imnaha River occurred between March 14 and June 25. Peak emigration occurred from May 1 to May 15. Natural steelhead smolts averaged 175 mm in fork length, 55.8 g in weight and had a mean condition factor of 1 .OO. Hatchery steelhead smolts emigrated from the Imnaha River between April 15 and June 27. Hatchery steelhead smolts averaged 210 mm in fork length, 88 g in weight and had a mean condition factor of 0.93. Spring runoff water conditions in 1997 provided above average flows for emigrating anadromous salmonid smolts. Imnaha River mean daily discharge during spring emigration ranged from 7

  4. Life-history diversity and its importance to population stability and persistence of a migratory fish: steelhead in two large North American watersheds.

    PubMed

    Moore, Jonathan W; Yeakel, Justin D; Peard, Dean; Lough, Jeff; Beere, Mark

    2014-09-01

    Life-history strategies can buffer individuals and populations from environmental variability. For instance, it is possible that asynchronous dynamics among different life histories can stabilize populations through portfolio effects. Here, we examine life-history diversity and its importance to stability for an iconic migratory fish species. In particular, we examined steelhead (Oncorhynchus mykiss), an anadromous and iteroparous salmonid, in two large, relatively pristine, watersheds, the Skeena and Nass, in north-western British Columbia, Canada. We synthesized life-history information derived from scales collected from adult steelhead (N = 7227) in these watersheds across a decade. These migratory fishes expressed 36 different manifestations of the anadromous life-history strategy, with 16 different combinations of freshwater and marine ages, 7·6% of fish performing multiple spawning migrations, and up to a maximum of four spawning migrations per lifetime. Furthermore, in the Nass watershed, various life histories were differently prevalent through time - three different life histories were the most prevalent in a given year, and no life history ever represented more than 45% of the population. These asynchronous dynamics among life histories decreased the variability of numerical abundance and biomass of the aggregated population so that it was > 20% more stable than the stability of the weighted average of specific life histories: evidence of a substantial portfolio effect. Year of ocean entry was a key driver of dynamics; the median correlation coefficient of abundance of life histories that entered the ocean the same year was 2·5 times higher than the median pairwise coefficient of life histories that entered the ocean at different times. Simulations illustrated how different elements of life-history diversity contribute to stability and persistence of populations. This study provides evidence that life-history diversity can dampen fluctuations in

  5. Who's your momma? Recognizing maternal origin of juvenile steelhead using injections of strontium chloride to create transgenerational marks

    USGS Publications Warehouse

    Shippentower, Gene E.; Schreck, Carl B.; Heppell, Scott A.

    2011-01-01

    We sought to determine whether a strontium chloride injection could be used to create a transgenerational otolith mark in steelhead Oncorhynchus mykiss. Two strontium injection trials and a survey of strontium: calcium (Sr:Ca) ratios in juvenile steelhead from various steelhead hatcheries were conducted to test the feasibility of the technique. In both trials, progeny of fish injected with strontium had significantly higher Sr:Ca ratios in the primordial region of their otoliths, as measured by an electron wavelength dispersive microprobe. In trial 1, the 5,000-mg/L treatment level showed that 56.8% of the otoliths were correctly classified, 12.2% being misclassified as belonging to the 0-mg/L treatment. In trial 2, the 20,000-mg/L treatment level showed that 30.8% of the otoliths were correctly classified, 13.5% being misclassified as belonging to the 0-mg/L treatment. There were no differences in the fertilization rates of eggs or survival rates of fry between the treatment and control groups. The Sr:Ca ratios in otoliths collected from various hatchery populations of steelhead varied and were greater than those found in otoliths from control fish in both of our injection trials. This study suggests that the marking technique led to recognizable increases in Sr:Ca ratios in some otoliths collected from fry produced by injected females. Not all progeny showed such increases, however, suggesting that the method holds promise but requires further refinement to reduce variation. Overall, there was a correct classification of about 40% across all treatments and trials; the variation in Sr:Ca ratios found among experimental trials and hatcheries indicates that care must be taken if the technique is employed where fish from more than one hatchery could be involved.

  6. Linking habitat quality with trophic performance of steelhead along forest gradients in the South Fork Trinity River Watershed, California

    USGS Publications Warehouse

    McCarthy, Sarah G.; Duda, Jeffrey J.; Emlen, John M.; Hodgson, Garth R.; Beauchamp, David A.

    2009-01-01

    We examined invertebrate prey, fish diet, and energy assimilation in relation to habitat variation for steelhead Oncorhynchus mykiss (anadromous rainbow trout) and rainbow trout in nine low-order tributaries of the South Fork Trinity River, northern California. These streams spanned a range of environmental conditions, which allowed us to use bioenergetics modeling to determine the relative effects of forest cover, stream temperature, season, and fish age on food consumption and growth efficiency. Evidence of seasonal shifts in reliance on aquatic versus terrestrial food sources was detected among forest cover categories and fish ages, although these categories were not robust indicators of O. mykiss condition and growth efficiency. Consumption estimates were generally less than 20% of maximum consumption, and fish lost weight in some streams during summer low-flow conditions when stream temperatures exceeded 15°C. Current 100-year climate change projections for California threaten to exacerbate negative growth patterns and may undermine the productivity of this steelhead population, which is currently not listed as endangered or threatened. To demonstrate the potential effect of global warming on fish growth, we ran three climate change scenarios in two representative streams. Simulated temperature increases ranging from 1.4°C to 5.5°C during the summer and from 1.5°C to 2.9C during the winter amplified the weight loss; estimated average growth for age-1 fish was 0.4–4.5 times lower than normal (low to high estimated temperature increase) in the warm stream and 0.05–0.8 times lower in the cool stream. We conclude that feeding rate and temperature during the summer currently limit the growth and productivity of steelhead and rainbow trout in low-order streams in the South Fork Trinity River basin and predict that climate change will have detrimental effects on steelhead growth as well as on macroinvertebrate communities and stream ecosystems in general.

  7. Effects of hatchery fish density on emigration, growth, survival, and predation risk of natural steelhead parr in an experimental stream channel

    USGS Publications Warehouse

    Tatara, Christopher P.; Riley, Stephen C.; Berejikian, Barry A.

    2011-01-01

    Hatchery supplementation of steelhead Oncorhynchus mykiss raises concerns about the impacts on natural populations, including reduced growth and survival, displacement, and increased predation. The potential risks may be density dependent.We examined how hatchery stocking density and the opportunity to emigrate affect the responses of natural steelhead parr in an experimental stream channel and after 15 d found no density-dependent effects on growth, emigration, or survival at densities ranging from 1-6 hatchery parr/m2. The opportunity for steelhead parr to emigrate reduced predation by coastal cutthroat trout O. clarkii clarkii on both hatchery and natural steelhead parr. The cutthroat trout exhibited a type-I functional response (constant predation rate with increased prey density) for the hatchery and composite populations. In contrast, the predation rate on natural parr decreased as hatchery stocking density increased. Supplementation with hatchery parr at any experimental stocking density reduced the final natural parr density. This decline was explained by increased emigration fromthe supplemented groups. Natural parr had higher mean instantaneous growth rates than hatchery parr. The proportion of parr emigrating decreased as parr size increased over successive experimental trials. Smaller parr had lower survival and suffered higher predation. The final density of the composite population, a measure of supplementation effectiveness, increased with the hatchery steelhead stocking rate. Our results indicate that stocking larger hatchery parr (over 50 d postemergence) at densities within the carrying capacity would have low short-term impact on the growth, survival, and emigration of natural parr while increasing the density of the composite population; in addition, a stocking density greater than 3 fish/m2 might be a good starting point for the evaluation of parr stocking in natural streams.

  8. Evaluation of Head-of-Reservoir Conditions for Downstream Migration of Juvenile Chinook Salmon and Steelhead at Shasta Lake, California

    NASA Astrophysics Data System (ADS)

    Clancey, K. M.; Saito, L.; Svoboda, C.; Bender, M. D.; Hannon, J.; Hellmann, K. M.

    2015-12-01

    Since completion of Shasta Dam, migration of Chinook salmon and steelhead trout in the Sacramento River has been blocked, causing loss of spawning and rearing habitat. This has been a factor leading to population declines of these fish species over several decades. Winter-run Chinook salmon, spring-run Chinook salmon and steelhead trout are now listed under the Endangered Species Act. A habitat assessment of the tributaries upstream of Shasta Dam showed that the Sacramento and McCloud tributaries have suitable habitat for reintroduction of adult salmon and steelhead for spawning. Such reintroduction would require downstream passage of juvenile Chinook salmon and steelhead past Shasta Dam. To evaluate the possibility of collecting and transporting juvenile Chinook salmon and steelhead past Shasta Dam, a CE-QUAL-W2 model of Shasta Lake and the Sacramento River, McCloud River, Pit River and Squaw Creek tributaries was used to assess where and when conditions were favorable at head-of-reservoir locations upstream of proposed temperature curtains to collect juvenile fish. Head-of-reservoir is the zone of transition between the river and the upstream end of the reservoir. Criteria for evaluating locations suitable to collect these fish included water temperature and velocities in the Sacramento and McCloud tributaries. Model output was analyzed during months of downstream migration under dry, median and wet year conditions. Potential for proposed temperature curtains, anchored and floating, to improve conditions for fish migration was also evaluated with the CE-QUAL-W2 model. Use of temperature curtains to assist fish migration is a novel approach that to our knowledge has not previously been assessed for recovery of Chinook salmon and steelhead populations. Providing safe passage conditions is challenging, however the study findings may assist in formulation of a juvenile fish passage alternative that is suitable for Shasta Lake.

  9. Characterize and Quantify Residual Steelhead in the Clearwater River, Idaho, 1999-2000 Progress Report.

    SciTech Connect

    Brostrom, Jody K.

    2006-08-01

    site groups that were mature at tagging rarely migrated downstream. If smolts migrated they did it in the same year they were released, as less than 0.02% were observed migrating the second year. We sampled the Clearwater River, North Fork Clearwater River, Bedrock Creek, Big Canyon Creek, Cottonwood Creek, Jacks Creek and the Dworshak National Fish Hatchery adult ladder to collect residual hatchery steelhead. We PIT-tagged and released 3,651 hatchery steelhead and collected 645 hatchery steelhead for coded wire tags. Most residual hatchery steelhead were caught within 4 rkm of Dworshak National Fish Hatchery. Hatchery steelhead sampled in the North Fork Clearwater River and the Dworshak Hatchery adult ladder were significantly larger than those sampled in the Clearwater River and lower tributaries in all years except 2001 (205 mm, 205 mm, 223 mm and 238 mm North Fork Clearwater River; 190 mm, 182 mm, 226 mm and 189 mm Clearwater River). Of the hatchery steelhead we PIT-tagged, only 12% were observed at downstream observation sites. Most migrants were tagged in the Clearwater River (91%) and were smaller than hatchery steelhead that were tagged but were not detected. Most migrants were detected in the same year they were tagged, but 14% held over and migrated in the second year after tagging. We documented migration outside of the normal window, as one detection occurred on October 31 at Lower Granite Dam. We recaptured 130 individual hatchery steelhead that we had tagged during sampling. Over 77% of the recaptures were within one km of where they were tagged, and 67% of the recaptures were tagged in the North Fork Clearwater River and the Dworshak Hatchery adult ladder. We calculated a mean growth rate of 0.27 mm/day for fish we recaptured. For those hatchery steelhead we PIT-tagged, the proportion of males was 13%, the rest we could not ascertain gender. All the males were precocious. Over 97% of the coded-wire tag recoveries came from hatchery steelhead released at

  10. Fish Research Project, Oregon : Evaluation of the Success of Supplementing Imnaha River Steelhead with Hatchery Reared Smolts: Phase One : Completion Report.

    SciTech Connect

    Carmichael, Richard W.; Whitesel, Timothy A.; Jonasson, Brian C.

    1995-08-01

    Two streams in the Imnaha River subbasin (Camp Creek and Little Sheep Creek) and eight streams in the Grande Ronde River subbasin (Catherine, Deer, Five Points, Fly, Indian, Lookingglass, Meadow, and Sheep creeks) were selected as study streams to evaluate the success and impacts of steelhead supplementation in northeast Oregon. The habitat of the study streams was inventoried to compare streams and to evaluate whether habitat might influence the performance parameters we will measure in the study. The mean fecundity of hatchery and natural steelhead 1-salts returning to Little Sheep Creek fish facility in 1990 and 1991 ranged from 3,550 to 4,663 eggs/female; the mean fecundity of hatchery and natural steelhead 2-salts ranged from 5,020 to 5,879 eggs/female. Variation in length explained 57% of the variation in fecundity of natural steelhead, but only 41% to 51% of the variation in fecundity of hatchery steelhead. Adult steelhead males had an average spermatocrit of 43.9% at spawning. We were also able to stain sperm cells so that viable cells could be distinguished from dead cells. Large, red disc tags may be the most useful for observing adults on the spawning grounds. The density of wild, juvenile steelhead ranged from 0 fish/l00{sup 2} to 35.1 (age-0) and 14.0 (age-1) fish/l00m{sup 2}. Evidence provided from the National Marine Fisheries Service suggests that hatchery and wild fish within a subbasin are genetically similar. The long-term experimental design is presented as a component of this report.

  11. Seismology of the Oso-Steelhead landslide

    NASA Astrophysics Data System (ADS)

    Hibert, C.; Stark, C. P.; Ekström, G.

    2014-12-01

    We carry out a combined analysis of the short- and long-period seismic signals generated by the devastating Oso-Steelhead landslide that occurred on 22 March 2014. The seismic records show that the Oso-Steelhead landslide was not a single slope failure, but a succession of multiple failures distinguished by two major collapses that occurred approximately three minutes apart. The first generated long-period surface waves that were recorded at several proximal stations. We invert these long-period signals for the forces acting at the source, and obtain estimates of the first failure runout and kinematics, as well as its mass after calibration against the mass-center displacement estimated from remote-sensing imagery. Short-period analysis of both events suggests that the source dynamics of the second are more complex than the first. No distinct long-period surface waves were recorded for the second failure, which prevents inversion for its source parameters. However, by comparing the seismic energy of the short-period waves generated by both events we are able to estimate the volume of the second. Our analysis suggests that the volume of the second failure is about 15-30% of the total landslide volume, which is in agreement with ground observations.

  12. Migration depths of juvenile Chinook salmon and steelhead relative to total dissolved gas supersaturation in a Columbia River reservoir

    USGS Publications Warehouse

    Beeman, J.W.; Maule, A.G.

    2006-01-01

    The in situ depths of juvenile salmonids Oncorhynchus spp. were studied to determine whether hydrostatic compensation was sufficient to protect them from gas bubble disease (GBD) during exposure to total dissolved gas (TDG) supersaturation from a regional program of spill at dams meant to improve salmonid passage survival. Yearling Chinook salmon O. tshawytscha and juvenile steelhead O. mykiss implanted with pressure-sensing radio transmitters were monitored from boats while they were migrating between the tailrace of Ice Harbor Dam on the Snake River and the forebay of McNary Dam on the Columbia River during 1997-1999. The TDG generally decreased with distance from the tailrace of the dam and was within levels known to cause GBD signs and mortality in laboratory bioassays. Results of repeated-measures analysis of variance indicated that the mean depths of juvenile steelhead were similar throughout the study area, ranging from 2.0 m in the Snake River to 2.3 m near the McNary Dam forebay. The mean depths of yearling Chinook salmon generally increased with distance from Ice Harbor Dam, ranging from 1.5 m in the Snake River to 3.2 m near the forebay. Juvenile steelhead were deeper at night than during the day, and yearling Chinook salmon were deeper during the day than at night. The TDG level was a significant covariate in models of the migration depth and rates of each species, but no effect of fish size was detected. Hydrostatic compensation, along with short exposure times in the area of greatest TDG, reduced the effects of TDG exposure below those generally shown to elicit GBD signs or mortality. Based on these factors, our results indicate that the TDG limits of the regional spill program were safe for these juvenile salmonids.

  13. 77 FR 21084 - Endangered and Threatened Species; Take of Anadromous Fish

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-04-09

    ... to federally threatened Central California Coast steelhead (Oncorhynchus mykiss), endangered Central..., smolts and adult Central California Coast (CCC) steelhead, juvenile, smolts and adult CCC coho salmon... through June. A subset of CCC coho salmon, CC steelhead, and CC Chinook smolts, parr, and...

  14. 77 FR 15719 - Endangered and Threatened Species; Take of Anadromous Fish

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-03-16

    ... relevant to Federally-listed threatened California Central Valley (CCV) steelhead (Oncorhynchus mykiss... and adult CCV steelhead during fish monitoring surveys in lower Putah Creek, a tributary to the... take of ESA-listed juvenile and adult CCV steelhead during implementation of the San Joaquin...

  15. Physiological comparisons of plasma and tissue metrics of selected inland and coastal steelhead kelts.

    USGS Publications Warehouse

    Penney, Zachary L.; Moffitt, Christine M.; Jones, Bryan; Marston, Brian

    2016-01-01

    The physiological status of migrating steelhead kelts (Oncorhynchus mykiss) from the Situk River, Alaska, and two tributaries of the Clearwater River, Idaho, was evaluated to explore potential differences in post-spawning survival related to energy reserves. Blood plasma samples were analyzed for metrics related to nutritional and osmotic status, and samples of white muscle tissue collected from recent mortalities at weirs were analyzed for proximate constituents. Female kelts from the Situk River had significantly higher plasma cholesterol, triglycerides, glucose and calcium concentrations, all of which suggested higher lipid and energy stores. Additional support for energy limitation in kelts was provided by evaluating the presence of detectable proteins in the plasma. Most all kelts sampled from the Situk River populations had detectable plasma proteins, in contrast to kelts sampled from the Clearwater River tributary populations where 27 % of kelts from one tributary, and 68 % of the second tributary were below the limits of detection. We found proximate constituents of kelt mortalities were similar between the Situk and Clearwater River populations, and the lipid fraction of white muscle averaged 0.1 and 0.2 %. Our findings lend support to the hypothesis that energetic limitations likely affect post-spawn survival in the Clearwater River kelts.

  16. Survival and growth of age-0 steelhead after surgical implantation of 23-mm passive integrated transponders

    USGS Publications Warehouse

    Bateman, D.S.; Gresswell, R.E.

    2006-01-01

    Little information is available on the effects of implanting 23-mm passive integrated transponder (PIT) tags in salmonids less than 90 mm fork length (FL). Using juvenile steelhead Oncorhynchus mykiss (range, 73–97 mm FL), we compared instantaneous growth rates and survival among three experimental groups: control, surgery with no tag, and surgery with tag. Survival rate was lower for tagged fish (86%) than for control and surgery−no tag fish (virtually 100% in each group). Approximately 90% of the mortalities occurred during days 1–3. Growth rate for the tagged group was lower for the first two 10-d measurement intervals; however, during the third 10-d interval, growth rates for tagged fish equaled or exceeded values for the other groups. These results suggest that tagged fish recovered by day 20. Growth rates for the control and surgery−no tag groups did not differ from one another during any measurement interval. Tag retention rate was 97% over the 30-d period of the study. It appears that the combination of fish length and tag size in this study resulted in short-term negative effects on growth rate and survival; however, 23-mm PIT tags may still be useful for studies of salmonids 80–90 mm FL when survival is not the parameter of interest.

  17. Investigations into the Early Life History of Naturally Produced Spring Chinook Salmon and Summer Steelhead in the Grande Ronde River Basin : Annual Report 2000 : Project Period 1 October 1999 to 30 November 2000.

    SciTech Connect

    Monzyk, Fred R.

    2002-06-01

    The authors determined migration timing and abundance of juvenile spring chinook salmon Oncorhynchus tshawytscha and juvenile steelhead/rainbow trout O. mykiss from three populations in the Grande Ronde River basin. Based on migration timing and abundance, two distinct life-history strategies of juvenile spring chinook and O.mykiss could be distinguished. An early migrant group left upper rearing areas from July through January with a peak in the fall. A late migrant group descended from upper rearing areas from February through June with a peak in the spring.

  18. Use of Dual Frequency Identification Sonar to Determine Adult Chinook Salmon (Oncorhynchus tshawytscha) Escapement in the Secesh River, Idaho ; Annual Report, January 2008 – December 2008.

    SciTech Connect

    Kucera, Paul A.

    2009-06-26

    Chinook salmon in the Snake River basin were listed as threatened under the Endangered Species Act in 1992 (NMFS 1992). The Secesh River represents the only stream in the Snake River basin where natural origin (wild) salmon escapement monitoring occurs at the population level, absent a supplementation program. As such the Secesh River has been identified as a long term salmon escapement and productivity monitoring site by the Nez Perce Tribe Department of Fisheries Resources Management. Salmon managers will use this data for effective population management and evaluation of the effect of conservation actions on a natural origin salmon population. The Secesh River also acts as a reference stream for supplementation program comparison. Dual frequency identification sonar (DIDSON) was used to determine adult spring and summer Chinook salmon escapement in the Secesh River in 2008. DIDSON technology was selected because it provided a non-invasive method for escapement monitoring that avoided listed species trapping and handling incidental mortality, and fish impedance related concerns. The DIDSON monitoring site was operated continuously from June 13 to September 14. The first salmon passage was observed on July 3. DIDSON site total estimated salmon escapement, natural and hatchery fish, was 888 fish {+-} 65 fish (95% confidence interval). Coefficient of variation associated with the escapement estimate was 3.7%. The DIDSON unit was operational 98.1% of the salmon migration period. Adult salmon migration timing in the Secesh River occurred over 74 days from July 3 to September 14, with 5,262 total fish passages observed. The spawning migration had 10%, median, and 90% passage dates of July 8, July 16, and August 12, respectively. The maximum number of net upstream migrating salmon was above the DIDSON monitoring site on August 27. Validation monitoring of DIDSON target counts with underwater optical cameras occurred for species identification. A total of 860 optical

  19. Geographic distribution of chromosome and microsatellite DNA polymorphisms in Oncorhynchus mykiss native to western Washington

    USGS Publications Warehouse

    Ostberg, C.O.; Thorgaard, G.H.

    1999-01-01

    Chromosome studies of native populations of Oncorhynchus mykiss (steelhead and rainbow trout) in western Washington and southern British Columbia revealed the presence of two evolutionarily distinct chromosome lineages. Populations between, and including, the Elwha River, Washington, and Chilliwack River, British Columbia, contained 2n = 60 chromosomes. Populations on the central Washington coast contained 2n = 58 chromosomes. The north Washington coast and western Strait of Juan de Fuca contained individuals with 58, 59, or 60 chromosomes, suggesting this is a transition zone between 58 and 60 chromosome groups. The differences in chromosomal structure between 2n = 58 and 2n = 60 groups are presumably a Robertsonian rearrangement and an inversion. Allelic variation at three microsatellite loci (One ??6, One ??11 and Omy 77) also was examined, and no significant variation was detected among the 58 and 60 chromosome races. A hypothesis is presented concerning the origin of the 60 chromosome lineage.

  20. Transporting juvenile salmonids around dams impairs adult migration.

    PubMed

    Keefer, Matthew L; Caudill, Christopher C; Peery, Christopher A; Lee, Steven R

    2008-12-01

    Mitigation and ecosystem-restoration efforts may have unintended consequences on both target and nontarget populations. Important effects can be displaced in space and time, making them difficult to detect without monitoring at appropriate scales. Here, we examined the effects of a mitigation program for juvenile salmonids on subsequent adult migration behaviors and survival. Juvenile chinook salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss) were collected and uniquely tagged with passive integrated transponder (PIT) tags at Lower Granite Dam (Washington State, USA) on the Snake River and were then either transported downstream in barges in an effort to reduce out-migration mortality or returned to the river as a control group. Returning adults were collected and radio-tagged at Bonneville Dam (Washington-Oregon, USA) on the Columbia River 1-3 years later and then monitored during approximately 460 km of their homing migrations. The proportion of adults successfully homing was significantly lower, and unaccounted loss and permanent straying into non-natal rivers was higher, for barged fish of both species. On average, barged fish homed to Lower Granite Dam at rates about 10% lower than for in-river migrants. Barged fish were also 1.7-3.4 times more likely than in-river fish to fall back downstream past dams as adults, a behavior strongly associated with lower survival. These results suggest that juvenile transport impaired adult orientation or homing abilities, perhaps by disrupting sequential imprinting processes during juvenile out-migration. While juvenile transportation has clear short-term juvenile-survival benefits, the delayed effects that manifest in adult stages illustrate the need to assess mitigation success throughout the life cycle of target organisms, i.e., the use of fitness-based measures. In the case of Snake River salmonids listed under the Endangered Species Act, the increased straying and potential associated genetic and demographic

  1. Divergent immunity and energetic programs in the gills of migratory and resident Oncorhynchus mykiss.

    PubMed

    Sutherland, Ben J G; Hanson, Kyle C; Jantzen, Johanna R; Koop, Ben F; Smith, Christian T

    2014-04-01

    Divergent life history strategies occur in steelhead or rainbow trout Oncorhynchus mykiss, and many populations produce both migrant (anadromous fish that move to the ocean after rearing) and resident (do not migrate and remain in fresh water) individuals. Mechanisms leading to each type are only partially understood; while the general tendency of a population is heritable, individual tendency may be plastic, influenced by local environment. Steelhead hatchery programmes aim to mitigate losses in wild stocks by producing trout that will migrate to the ocean and not compete with wild trout for limited freshwater resources. To increase our understanding of gill function in these migratory or resident phenotypes, here we compare gill transcriptome profiles of hatchery-released fish either at the release site (residents) or five river kilometres downstream while still in full fresh water (migrants). To test whether any of these genes can be used as predictive markers for smoltification, we compared these genes between migrant-like and undifferentiated trout while still in the hatchery in a common environment (prerelease). Results confirmed the gradual process of smoltification, and the importance of energetics, gill remodelling and ion transport capacity for migrants. Additionally, residents overexpressed transcripts involved in antiviral defences, potentially for immune surveillance via dendritic cells in the gills. The best smoltification marker candidate was protein s100a4, expression of which was highly correlated with Na(+) , K(+) ATPase (NKA) activity and smolt-like morphology in pre- and postrelease trout gills. PMID:24612010

  2. Operation, Maintenance and Evaluation of the Bonifer and Minthorn Springs Juvenile Release and Adult Collection Facilities, 1988 Annual Report.

    SciTech Connect

    Lofy, Peter T.

    1989-12-01

    The Confederated Tribes of the Umatilla Indian Reservation and Oregon Department of Fish and Wildlife are cooperating in a joint effort to increase steelhead and re-establish salmon runs in the Umatilla River Basin. As part of this program, Bonifer and Minthorn Acclimation Facilities are operated for holding adult steelhead and acclimation and release of juvenile steelhead and salmon. This report details the projects and maintenance done during 1988.

  3. Operation, Maintenance, and Evaluation of the Bonifer and Minthorn Springs Juvenile Release and Adult Collection Facilities, 1987 Annual Report.

    SciTech Connect

    Lofy, Peter T.

    1988-12-01

    The Confederated Tribes of the Umatilla Indian Reservation and Oregon Department of Fish and Wildlife are cooperating in a joint effort to increase steelhead and re-establish salmon runs in the Umatilla River Basin. As part of this program, Bonifer and Minthorn Acclimation Facilities are operated for holding adult steelhead and acclimation and release of juvenile steelhead and salmon. This report details the projects and maintenance done during 1987.

  4. Intensive Evaluation and Monitoring of Chinook Salmon and Steelhead Trout Production, Crooked River and Upper Salmon River Sites, 1995 Annual Report.

    SciTech Connect

    Kiefer, Russell B.; Lockhart, Jerald N.

    1999-10-01

    The purpose of this intensive monitoring project is to determine the number of returning chinook salmon and steelhead trout adults necessary to achieve optimal smolt production and develop habitat enhancement mitigation accounting based on increases in wild/natural smolt production. Two locations in Idaho are being intensively studied to meet these objectives. Information from this research will be applied to parr monitoring streams statewide to develop escapement objectives and determine success of habitat enhancement projects. The project to date has developed good information on the relationship between chinook salmon adult escapement and smolt production at low to medium seeding levels. Adult chinook salmon escapements have been too low for us to test carrying capacity. For steelhead trout, they have developed a relationship between parr populations and smolt production at low to high seeding levels, with limited information on carrying capacity.

  5. Passage Distribution and Federal Columbia River Power System Survival for Steelhead Kelts Tagged Above and at Lower Granite Dam, Year 2

    SciTech Connect

    Colotelo, Alison HA; Harnish, Ryan A.; Jones, Bryan W.; Hanson, Amanda C.; Trott, Donna M.; Greiner, Michael J.; McMichael, Geoffrey A.; Ham, Kenneth D.; Deng, Zhiqun; Brown, Richard S.; Weiland, Mark A.; Li, X.; Fu, Tao

    2014-03-28

    Steelhead (Oncorhynchus mykiss) populations have declined throughout their range in the last century and many populations, including those of the Snake River Basin are listed under the Endangered Species Act of 1973. The reasons for their decline are many and complex, but include habitat loss and degradation, overharvesting, and dam construction. The 2008 Biological Opinion calls for an increase in the abundance of female steelhead through an increase in iteroparity (i.e., repeat spawning) and this can be realized through a combination of reconditioning and in-river survival of migrating kelts. The goal of this study is to provide the data necessary to inform fisheries managers and dam operators of Snake River kelt migration patterns, survival, and routes of dam passage. Steelhead kelts (n = 487) were captured and implanted with acoustic transmitters and passive integrated transponder (PIT)-tags at the Lower Granite Dam (LGR) Juvenile Fish Facility and at weirs located in tributaries of the Snake and Clearwater rivers upstream of LGR. Kelts were monitored as they moved downstream through the Federal Columbia River Power System (FCRPS) by 15 autonomous and 3 cabled acoustic receiver arrays. Cabled receiver arrays deployed on the dam faces allowed for three-dimensional tracking of fish as they approached the dam face and were used to determine the route of dam passage. Overall, 27.3% of the kelts tagged in this study successfully migrated to Martin Bluff (rkm 126, as measured from the mouth of the Columbia River), which is located downstream of all FCRPS dams. Within individual river reaches, survival per kilometer estimates ranged from 0.958 to 0.999; the lowest estimates were observed in the immediate forebay of FCRPS dams. Steelhead kelts tagged in this study passed over the spillway routes (spillway weirs, traditional spill bays) in greater proportions and survived at higher rates compared to the few fish passed through powerhouse routes (turbines and juvenile

  6. Passage Distribution and Federal Columbia River Power System Survival for Steelhead Kelts Tagged Above and at Lower Granite Dam, Year 2

    SciTech Connect

    Colotelo, Alison H.A.; Harnish, Ryan A.; Jones, Bryan W.; Hanson, Amanda C.; Trott, Donna M.; Greiner, Michael J.; Mcmichael, Geoffrey A.; Ham, Kenneth D.; Deng, Zhiqun; Brown, Richard S.; Weiland, Mark A.; Li, Xinya; Fu, Tao

    2014-12-15

    Steelhead (Oncorhynchus mykiss) populations have declined throughout their range in the last century and many populations, including those of the Snake River Basin are listed under the Endangered Species Act of 1973. The reasons for their decline are many and complex, but include habitat loss and degradation, overharvesting, and dam construction. The 2008 Biological Opinion calls for an increase in the abundance of female steelhead through an increase in iteroparity (i.e., repeat spawning) and this can be realized through a combination of reconditioning and in-river survival of migrating kelts. The goal of this study is to provide the data necessary to inform fisheries managers and dam operators of Snake River kelt migration patterns, survival, and routes of dam passage. Steelhead kelts (n = 487) were captured and implanted with acoustic transmitters and passive integrated transponder (PIT)-tags at the Lower Granite Dam (LGR) Juvenile Fish Facility and at weirs located in tributaries of the Snake and Clearwater rivers upstream of LGR. Kelts were monitored as they moved downstream through the Federal Columbia River Power System (FCRPS) by 15 autonomous and 3 cabled acoustic receiver arrays. Cabled receiver arrays deployed on the dam faces allowed for three-dimensional tracking of fish as they approached the dam face and were used to determine the route of dam passage. Overall, 27.3% of the kelts tagged in this study successfully migrated to Martin Bluff (rkm 126, as measured from the mouth of the Columbia River), which is located downstream of all FCRPS dams. Within individual river reaches, survival per kilometer estimates ranged from 0.958 to 0.999; the lowest estimates were observed in the immediate forebay of FCRPS dams. Steelhead kelts tagged in this study passed over the spillway routes (spillway weirs, traditional spill bays) in greater proportions and survived at higher rates compared to the few fish passed through powerhouse routes (turbines and juvenile

  7. Modeling the Oxygen Consumption Rates in Pacific Salmon and Steelhead: An Assessment of Current Models and Practices

    SciTech Connect

    Trudel, Marc; Geist, David R.; Welch, David W.

    2004-03-01

    Bioenergetic models of fish have been used to study a large number of processes. Like most models, bioenergetic models require the estimation of numerous parameters. As a consequence, they have often relied on parameters borrowed from other species or values extrapolated from other life stages or size-classes. The magnitude of the biases associated with these practices remains largely unknown. The objective of this study was to determine whether or not metabolic rates could be extrapolated between closely related species and life stages. We focused on Pacific salmon Oncorhynchus spp. and steelhead O. mykiss, as the metabolic rates of these species have been well documented. Our analyses showed that models derived from closely related species did not accurately predict the metabolic rates of salmon, indicating that the practice of "species borrowing" should be avoided in assessing fish metabolic rates. Our work also showed that allometric equations of metabolic rates were not stable when measured over small size ranges and that biases could be introduced when these models are extrapolated to smaller or larger fish. In addition, we found that, except for steelhead, published models of Pacific salmon metabolic rate were inaccurate. Mean bias ranged from close to 0% to over 200% depending on size and water temperature, with about two-thirds of the bias values exceeding 20%. These biases could have large impacts on bioenergetic model predictions. Increased funding and scientific recognition of the need for additional basic research will be necessary to build more accurate bioenergetic models for Pacific salmon, especially models applied to the ocean phase of the life cycle.

  8. Natural Reproductive Success and Demographic Effects of Hatchery-Origin Steelhead in Abernathy Creek, Washington : Annual Report 2008.

    SciTech Connect

    U.S. Fish & Wildlife Service, Abernathy Fish Technology Center

    2008-12-01

    Many hatchery programs for steelhead pose genetic or ecological risks to natural populations because those programs release or outplant fish from non-native stocks. The goal of many steelhead programs has been to simply provide 'fishing opportunities' with little consideration given to conservation concerns. For example, the Washington Department of Fish and Wildlife (WDFW) has widely propagated and outplanted one stock of winter-run steelhead (Chambers Creek stock) and one stock of summer-run steelhead (Skamania stock) throughout western Washington. Biologists and managers now recognize potential negative effects can occur when non-native hatchery fish interact biologically with native populations. Not only do non-native stocks pose genetic and ecological risks to naturally spawning populations, but non-native fish stray as returning adults at a much higher rate than do native fish (Quinn 1993). Biologists and managers also recognize the need to (a) maintain the genetic resources associated with naturally spawning populations and (b) restore or recover natural populations wherever possible. As a consequence, the U.S. Fish & Wildlife Service (USFWS) and the NOAA Fisheries have been recommending a general policy that discourages the use of non-native hatchery stocks and encourages development of native broodstocks. There are two primary motivations for these recommendations: (1) reduce or minimize potential negative biological effects resulting from genetic or ecological interactions between hatchery-origin and native-origin fish and (2) use native broodstocks as genetic repositories to potentially assist with recovery of naturally spawning populations. A major motivation for the captive-rearing work described in this report resulted from NOAA's 1998 Biological Opinion on Artificial Propagation in the Columbia River Basin. In that biological opinion (BO), NOAA concluded that non-native hatchery stocks of steelhead jeopardize the continued existence of U

  9. The Response of a Steelhead Trout Population to Wildfire at the Landscape Scale

    NASA Astrophysics Data System (ADS)

    Boughton, D. A.

    2012-12-01

    Wildfire is a prevalent disturbance of watersheds that impacts stream habitats and fish abundance, by direct removal of riparian vegetation and indirect effects on sediment regimes and water quality. Individual studies at the reach scale of the fish Oncorhynchus mykiss (steelhead trout) after wildfire show that habitat- and population-response is highly context dependent, suggesting broad-scale heterogeneity in effects of wildfire, possibly linked to fluvial processes. Here I report the results of a novel study design that examined wildfire response of O. mykiss and its habitat condition at 26 reaches sampled from a stream system heavily burned during the 2008 Indians/Basin Complex Fire in the central California chaparral. Proportional decline in juvenile fish abundances in the year after the wildfire were large but spatially heterogeneous (ranging by 2 orders of magnitude). Influence diagrams suggested that the major impact of the fire on the fish was not direct impacts on riparian vegetation (which were quite minor), but indirect impacts via pulses of fine sediment into channels the following winter. Abundance at some sites increased after the fire; the largest increases were not outside (downstream of) the burned area, but rather were in headwater reaches inside the burned area. In the year after the wildfire, fish abundance rebounded, with magnitude of rebound nearly proportional to the previous year's decline at most sites, suggesting rapid recovery of habitat quality and population recruitment. This study illustrates the importance of spatial structure and fluvial-process diversity for the rapid recovery of a fish after an intense wildfire.

  10. Intensive Evaluation and Monitoring of Chinook Salmon and Steelhead Trout Production Crooked River and Upper Salmon River Sites, 1993 Annual Report.

    SciTech Connect

    Kiefer, Russell B.; Lockhart, Jerald N.

    1995-06-01

    The purpose of this intensive monitoring project is to determine the number of returning chinook and steelhead adults necessary to achieve optimal smolt production and develop mitigation accounting based on increases in smolt production. Two locations in Idaho are being intensively studied to meet these objectives. Information from this research will be applied to parr monitoring streams statewide to develop escapement objectives and determine success of habitat enhancement projects.

  11. Hood River Steelhead Genetics Study; Relative Reproductive Success of Hatchery and Wild Steelhead in the Hood River, Final Report 2002-2003.

    SciTech Connect

    Blouin, Michael

    2003-05-01

    There is a considerable interest in using hatcheries to speed the recovery of wild populations. The Bonneville Power Administration (BPA), under the authority of the Northwest Power Planning Act, is currently funding several hatchery programs in the Columbia Basin as off-site mitigation for impacts to salmon and steelhead caused by the Columbia River federal hydropower system. One such project is located on the Hood River, an Oregon tributary of the Columbia. These hatchery programs cost the region millions of dollars. However, whether such programs actually improve the status of wild fish remains untested. The goal of this project was to evaluate the effectiveness of the Hood River hatchery program as required by the Northwest Power Planning Council Fish and Wildlife Program, by the Oregon Plan for Coastal Salmonids, by NMFS ESA Section 4(d) rulings, and by the Oregon Department of Fish and Wildlife (ODFW) Wild Fish Management Policy (OAR 635-07-525 through 529) and the ODFW Hatchery Fish Gene Resource Management Policy (OAR 635-07-540 through 541). The Hood River supports two populations of steelhead, a summer run and a winter run. They spawn only above the Powerdale Dam, which is a complete barrier to all salmonids. Since 1991 every adult passed above the dam has been measured, cataloged and sampled for scales. Therefore, we have a DNA sample from every adult steelhead that went over the dam to potentially spawn in the Hood River from 1991 to the present. Similar numbers of hatchery and wild fish have been passed above the dam during the last decade. During the 1990's 'old' domesticated hatchery stocks of each run (multiple generations in the hatchery, out-of-basin origin; hereafter H{sub old}) were phased out, and conservation hatchery programs were started for the purpose of supplementing the two wild populations (hereafter 'new' hatchery stocks, H{sub new}). These samples gave us the unprecedented ability to estimate, via microsatellite-based pedigree

  12. Genome-wide association reveals genetic basis for the propensity to migrate in wild populations of rainbow and steelhead trout.

    PubMed

    Hecht, Benjamin C; Campbell, Nathan R; Holecek, Dean E; Narum, Shawn R

    2013-06-01

    Little is known of the genetic basis of migration despite the ecological benefits migratory species provide to their communities and their rapid global decline due to anthropogenic disturbances in recent years. Using next-generation sequencing of restriction-site-associated DNA (RAD) tags, we genotyped thousands of single nucleotide polymorphisms (SNPs) in two wild populations of migratory steelhead and resident rainbow trout (Oncorhynchus mykiss) from the Pacific Northwest of the United States. One population maintains a connection to the sea, whereas the other population has been sequestered from its access to the ocean for more than 50 years by a hydropower dam. Here we performed a genome-wide association study to identify 504 RAD SNP markers from several genetic regions that were associated with the propensity to migrate both within and between the populations. Our results corroborate those in previous quantitative trait loci studies and provide evidence for additional loci associated with this complex migratory life history. Our results suggest a complex multi-genic basis with several loci of small effect distributed throughout the genome contributing to migration in this species. We also determined that despite being sequestered for decades, the landlocked population continues to harbour genetic variation associated with a migratory life history and ATPase activity. Furthermore, we demonstrate the utility of genotyping-by-sequencing and how RAD-tag SNP data can be readily compared between studies to investigate migration within this species. PMID:23106605

  13. Behavior and dam passage of juvenile Chinook salmon and juvenile steelhead at Detroit Reservoir and Dam, Oregon, March 2012-February 2013

    USGS Publications Warehouse

    Beeman, John W.; Hansel, Hal C.; Hansen, Amy C.; Evans, Scott D.; Haner, Philip V.; Hatton, Tyson W.; Kofoot, Eric E.; Sprando, Jamie M.; Smith, Collin D.

    2014-01-01

    The in-reservoir movements and dam passage of individual juvenile Chinook salmon (Oncorhynchus tshawytscha) and juvenile steelhead (Oncorhynchus mykiss) were studied at Detroit Reservoir and Dam, near Detroit, Oregon, during 2012 and 2013. The goal of the study was to provide data to inform decisions about future downstream passage alternatives and factors affecting downstream passage rates with the existing dam configuration. In 2012, 468 juvenile Chinook salmon and 200 juvenile steelhead were tagged and released during a 3-month period in the spring, and another 514 juvenile Chinook salmon were tagged and released during a 3-month period in the fall. The fish were surgically implanted with a small acoustic transmitter with an expected life of about 3 months and a passive integrated transponder tag with an indefinite life, and were released into the two main tributaries several kilometers upstream of the reservoir. Juvenile Chinook salmon migrated from the release sites to the reservoir in a greater proportion than juvenile steelhead, but once in the reservoir, juvenile steelhead migrated to the forebay faster and had a higher dam passage rate than juvenile Chinook salmon. The routes available for passing water and fish varied throughout the year, with low reservoir elevations in winter and high reservoir elevations in summer in accordance with the flood-control purpose of the dam. Most dam passage was through the spillway during the spring and summer, when the reservoir elevation was high and the spillway and powerhouse were the most common routes in operation, and via the powerhouse during the fall and winter period, when the reservoir elevation was low and the regulating outlet and powerhouse were the most common routes in operation. Few tagged fish passed when the powerhouse was the only route in operation. Dam passage rates during the spring and summer were greatest at night, increased with dam discharge, and were greater when water was passed freely over the

  14. Use of a Fish Transportation Barge for Increasing Returns of Steelhead Imprinted for Homing, 1985 Annual Report.

    SciTech Connect

    Harmon, Jerrel R.

    1986-06-01

    A 6-year study to determine if transporting steelhead, Salmo gairdneri, smolts by barge from Dworshak National Fish Hatchery (NFH) to a release site on the Columbia River below Bonneville Dam would result in increased returns of adults to the various fisheries and to the hatchery homing sites is reported. During 1982 and 1983, over 500,000 juveniles were marked for the study. Adults have returned to in-river sampling sites, to the sport and Indian fisheries, and to the Dworshak NFH homing site from these groups of fish that were serially released as controls from the hatchery or barged as test fish to below Bonneville Dam. As of July 1985, most returns were from test and control groups released in the spring of 1982. Most returns from 1983 releases are expected during the 1985 and 1986 steelhead migration. Survival of both control and test fish released in late April and mid-May in 1982 was substantially higher than the survival of those released early (19 April) and late (31 May).

  15. Guidelines for monitoring and adaptively managing restoration of Chinook salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss) on the Elwha River

    USGS Publications Warehouse

    Peters, R.J.; Duda, J.J.; Pess, G.R.; Zimmerman, M.; Crain, P.; Hughes, Z.; Wilson, A.; Liermann, M.C.; Morley, S.A.; McMillan, J.; Denton, K.; Warheit, K.

    2014-01-01

    The monitoring and adaptive management approach provided is based on monitoring several categories of performance indicators, each containing associated ‘trigger’ values which, when met, alters restoration activities (e.g., hatchery releases and/or strategies) through four successive restoration phases. Performance indicators proposed in these EMAM guidelines are based upon Viable Salmon Population (VSP) metrics, including abundance, productivity, distribution, and diversity (McElhany et al. 2000). Trigger values for each performance indicator are developed for four different rest

  16. Detection of Nucleospora salmonis in steelhead,Oncorhynchus mykiss (Walbaum), using quantitative polymerase chain reaction(qPCR)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Nucleospora salmonis is an intranuclear microsporidian found in salmonid fishes. The parasiste principally infects lymphoblast cells resulting in chronic severe lymphoblastosis and leukemia-like conditions. N. salmonis generally weakens immune system function allowing for other, opportunistic infect...

  17. Characterize and Quantify Residual Steelhead in the Clearwater River, Idaho, 1999 Annual Report.

    SciTech Connect

    Bigelow, Patricia E.; Larsen, Chris A.

    2003-03-01

    Although sample sizes were small during the 1999 field season, we were able to verify at least some residual steelhead survive the winter to persist in the Clearwater River. Hatchery steelhead were found in low numbers migrating up tributaries of the Clearwater River where wild A-run steelhead spawn. Data from this first year did not indicate differences in survival due to size, release site, or rearing system for steelhead reared at Dworshak National Fish Hatchery. This information needs to be compared over several (at least three) years for meaningful analysis. Final analysis will also include influences of water flow and temperature in emigration success. Based on one year of data, the majority of steelhead which do not emigrate during the first couple of weeks after release, are unlikely to emigrate at all.

  18. Comparative Survival Study (CSS) of PIT-Tagged Spring/Summer Chinook and Summer Steelhead : 2008 Annual Report.

    SciTech Connect

    Comparative Survival Study Oversight Committee and Fish Passage Center

    2008-12-02

    The Comparative Survival Study (CSS; BPA Project 199602000) began in 1996 with the objective of establishing a long term dataset of the survival rate of annual generations of salmon from their outmigration as smolts to their return to freshwater as adults to spawn (smolt-to-adult return rate; SAR). The study was implemented with the express need to address the question whether collecting juvenile fish at dams and transporting them downstream in barges and trucks and releasing them downstream of Bonneville Dam was compensating for the effect of the Federal Columbia River Power System (FCRPS) on survival of Snake Basin spring/summer Chinook salmon migrating through the hydrosystem. The Completion of this annual report for the CSS signifies the 12th outmigration year of hatchery spring/summer Chinook salmon marked with Passive Integrated Transponder (PIT) tags as part of the CSS and the 9th complete brood year return as adults of those PIT-tagged fish (report covers adult returns from 1997-2006 hatchery Chinook juvenile migrations). In addition, the CSS has provided PIT-tags to on-going tagging operations for wild Chinook since 2002 (report covers adult returns from 1994-2006 wild Chinook juvenile migrations). The CSS tags wild steelhead on the lower Clearwater River and utilized wild and hatchery steelhead from other tagging operations in evaluations of transportation (report covers adult returns from 1997-2005 wild and hatchery steelhead migrations). The primary purpose of this report is to update the time series of smolt-to-adult survival rate data and related parameters with additional years of data since the completion of the CSS 10-yr retrospective analysis report (Schaller et al 2007). The 10-yr report provided a synthesis of the results from this ongoing study, the analytical approaches employed, and the evolving improvements incorporated into the study as reported in CSS annual progress reports. This current report specifically addresses the constructive

  19. Disentangling the roles of air exposure, gill net injury, and facilitated recovery on the postcapture and release mortality and behavior of adult migratory sockeye salmon (Oncorhynchus nerka) in freshwater.

    PubMed

    Nguyen, Vivian M; Martins, Eduardo G; Robichaud, Dave; Raby, Graham D; Donaldson, Michael R; Lotto, Andrew G; Willmore, William G; Patterson, David A; Farrell, Anthony P; Hinch, Scott G; Cooke, Steven J

    2014-01-01

    We sought to improve the understanding of delayed mortality in migrating sockeye salmon (Oncorhynchus nerka) captured and released in freshwater fisheries. Using biotelemetry, blood physiology, and reflex assessments, we evaluated the relative roles of gill net injury and air exposure and investigated whether using a recovery box improved survival. Fish (n=238), captured by beach seine, were allocated to four treatment groups: captured only, air exposed, injured, and injured and air exposed. Only half of the fish in each group were provided with a 15-min facilitated recovery. After treatment, fish were radio-tagged and released to resume their migration. Blood status was assessed in 36 additional untagged fish sampled after the four treatments. Compared with fish sampled immediately on capture, all treatments resulted in elevated plasma lactate and cortisol concentrations. After air exposure, plasma osmolality was elevated and reflexes were significantly impaired relative to the control and injured treatments. Injured fish exhibited reduced short-term migration speed by 3.2 km/d and had a 14.5% reduced survival to subnatal watersheds compared to controls. The 15-min facilitated recovery improved reflex assessment relative to fish released immediately but did not affect survival. We suggest that in sockeye salmon migrating in cool water temperatures (∼13°-16°C), delayed mortality can result from injury and air exposure, perhaps through sublethal stress, and that injury created additive delayed mortality likely via secondary infections. PMID:24457927

  20. 50 CFR 660.402 - Definitions.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... (dog) salmon, Oncorhynchus keta Sockeye (red) salmon, Oncorhynchus nerka Steelhead (rainbow trout... fishing means fishing for salmon and steelhead in the fishery management area by a person authorized...

  1. Stock-specific migration timing of adult spring-summer Chinook salmon in the Columbia River basin

    USGS Publications Warehouse

    Keefer, M.L.; Peery, C.A.; Jepson, M.A.; Tolotti, K.R.; Bjornn, T.C.; Stuehrenberg, L.C.

    2004-01-01

    An understanding of the migration timing patterns of Pacific salmon Oncorhynchus spp. and steelhead O. mykiss is important for managing complex mixed-stock fisheries and preserving genetic and life history diversity. We examined adult return timing for 3,317 radio-tagged fish from 38 stocks of Columbia River basin spring-summer Chinook salmon O. tshawytscha over 5 years. Stock composition varied widely within and between years depending on the strength of influential populations. Most individual stocks migrated at similar times each year relative to overall runs, supporting the hypotheses that run timing is predictable, is at least partially due to genetic adaptation, and can be used to differentiate between some conspecific populations. Arrival timing of both aggregated radio-tagged stocks and annual runs was strongly correlated with river discharge; stocks arrived earlier at Bonneville Dam and at upstream dams in years with low discharge. Migration timing analyses identified many between-stock and between-year differences in anadromous salmonid return behavior and should and managers interested in protection and recovery of evolutionary significant populations.

  2. Characterize and Quantify Residual Steelhead in the Clearwater River, Idaho, 2001 Annual Report.

    SciTech Connect

    Larsen, Chris A.; Faler, Michael P.

    2003-03-01

    We tagged 4,505 hatchery steelhead from Dworshak National Fish Hatchery (NFH), with Passive Integrated Transponder (PIT) tags to evaluate factors contributing to residualism. Steelhead lengths from typical growth ponds (System I) averaged 8 mm less than those in System II and travel times were two days faster. Steelhead were released into Clear Creek, South Fork Clearwater River and directly from Dworshak NFH; detection rates were 75.7%, 77.9%, and 76.4%, respectively. The mean detection rates of steelhead by rearing system were 75.8%, 78.4%, and 74.7% for System I, System II, and System III. We PIT tagged an additional 1,131 hatchery steelhead in the North Fork and mainstem Clearwater rivers between April 9 and September 19. In the four tributaries sampled, 85 steelhead were PIT tagged and released, 57.6% were detected emigrating downstream. A total of 149 coded-wire tags were recovered; 18 were tagged at Dworshak NFH in 2000 and two in 1999. Additionally, 20 were released from the Clearwater Fish Hatchery and nine were released in Oregon. Although sample sizes were small, we were able to verify that at least 52 residual steelhead survived the winter to persist in the Clearwater River. These 52 steelhead were PIT tagged in 2000 and detected at Lower Granite Dam emigrating in 2001. Based on this years data, the majority of steelhead, which do not emigrate during the first couple of weeks after release, are unlikely to emigrate. Final analysis will also include influences of water flow and temperature in emigration success. This information needs to be compared over several years for meaningful analysis.

  3. Minthorn Springs Creek Summer Juvenile Release and Adult Collection Facility; 1993 Annual Report.

    SciTech Connect

    Rowan, Gerald D.

    1994-05-01

    The Confederated Tribes of the Umatilla Indian Reservation (CT'UIR) and Oregon Department of Fish and Wildlife (ODFW) are cooperating in a joint effort to supplement steelhead and re-establish salmon runs in the Umatilla River Basin. As an integral part of this program, Bonifer and Minthorn Acclimation Facilities are operated for holding and spawning adult steelhead and fall chinook salmon and acclimation and release of juvenile salmon and steelhead. This 1993 annual report details scheduled maintenance and other projects carried out during the year.

  4. Stock Identification of Columbia River Chinook Salmon and Steelhead Trout, 1986 Final Report.

    SciTech Connect

    Schreck, Carl B.; Li, Hiran W.; Hjort, Randy C.

    1986-08-01

    For the first time genetic similarities among chinook salmon and among steelhead trout stocks of the Columbia River were determined using a holistic approach including analysis of life history, biochemical, body shape and meristic characters. We examined between year differences for each of the stock characteristics and we also correlated the habitat characteristics with the wild stock characteristics. The most important principle for managing stocks of Columbia River chinook salmon and steelhead trout is that geographically proximal stocks tend to be like each other. Run timing and similarity of the stream systems should be taken into account when managing stocks. There are similarities in the classifications derived for chinook salmon and steelhead trout. Steelhead trout or chinook salmon tend to be genetically similar to other steelhead or chinook stocks, respectively, that originate from natal streams that are geographically close, regardless of time of freshwater entry. The primary exception Lo this trend is between stocks of spring and fall chinook in the upper Columbia River where fish with the different run timings are dissimilar, though geographically proximate stocks within a run form are generally very similar. Spring chinook stocks have stronger affinities to other spring chinook stocks that originate in the same side of the Cascade Range than to these Spring chinook stock: spawned on the other side of the Cascade Range. Spring chinook from west of the Cascades are more closely related to fall chinook than they are to spring chinook from east of the Cascades. Summer chinook can be divided into two main groups: (1) populations in the upper Columbia River that smolt as subyearlings and fall chinook stocks; and (2) summer chinook stocks from the Salmon River, Idaho, which smolt as yearlings and are similar to spring chinook stocks from Idaho. Fall chinook appear to comprise one large diverse group that is not easily subdivided into smaller subgroups. In

  5. Linking marine and freshwater growth in western Alaska Chinook salmon Oncorhynchus tshawytscha

    USGS Publications Warehouse

    Ruggerone, G.T.; Nielsen, J.L.; Agler, B.A.

    2009-01-01

    The hypothesis that growth in Pacific salmon Oncorhynchus spp. is dependent on previous growth was tested using annual scale growth measurements of wild Chinook salmon Oncorhynchus tshawytscha returning to the Yukon and Kuskokwim Rivers, Alaska, from 1964 to 2004. First-year marine growth in individual O. tshawytscha was significantly correlated with growth in fresh water. Furthermore, growth during each of 3 or 4 years at sea was related to growth during the previous year. The magnitude of the growth response to the previous year's growth was greater when mean year-class growth during the previous year was relatively low. Length (eye to tail fork, LETF) of adult O. tshawytscha was correlated with cumulative scale growth after the first year at sea. Adult LETF was also weakly correlated with scale growth that occurred during freshwater residence 4 to 5 years earlier, indicating the importance of growth in fresh water. Positive growth response to previous growth in O. tshawytscha was probably related to piscivorous diet and foraging benefits of large body size. Faster growth among O. tshawytscha year classes that initially grew slowly may reflect high mortality in slow growing fish and subsequent compensatory growth in survivors. Oncorhynchus tshawytscha in this study exhibited complex growth patterns showing a positive relationship with previous growth and a possible compensatory response to environmental factors affecting growth of the age class.

  6. The ultrastructure of spontaneous coronary arterial lesions in steelhead trout (Salmo gairdneri).

    PubMed Central

    House, E. W.; Benditt, E. P.

    1981-01-01

    Electron-microscopic examination of spontaneously occurring coronary arterial lesions in adult spawning steelhead trout showed them to be subendothelial accumulations of modified smooth muscle cells covered by an intact endothelium. Some of the cells in the nodules appeared highly vacuolated and seemed to be associated with varying amounts of collagen and elastin. The internal elastic lamina was often doubled with smooth muscle cells between the layers. The thickness of the internal elastica was altered and, in some lesions, penetrated by smooth muscle cells. In the smallest lesions, smooth muscle cells appeared to be penetrating the internal elastic lamina and were usually close to a highly vacuolated intimal endothelial cell. The underlying medial layer frequently exhibited altered orientation of the cells, with the frequent appearance of increased collagen and amorphous extracellular material. No lipid was present in any lesion. Although vacuolation of endothelial cells suggested some alteration in endothelial cells, at least in developed lesions, no evidence of endothelial denudation over lesions was observed. Images Figure 2 Figure 3 Figure 4 Figure 5 Figure 6 Figure 7 Figure 8 Figure 9 Figure 10 Figure 11 Figure 12 Figure 13 Figure 14 Figure 15 PMID:7294154

  7. Effects of telemetry transmitter placement on egg retention in naturally spawning, captively reared steelhead

    SciTech Connect

    Berejikian, Barry A.; Brown, Richard S.; Tatara, Chris P.; Cooke, Steven J.

    2007-05-01

    Maturing female anadromous salmonids receiving surgical intraperitoneally-implanted telemetry transmitters may experience difficulty depositing eggs during natural spawning. We allocated maturing adult steelhead females to three treatments: tags surgically implanted in the body cavity (internal), tags implanted between the skin and muscle tissue (subdermal), and non-tagged, and allowed them to spawn naturally in an experimental channel. Internally tagged females retained significantly more eggs than both the subdermally tagged treatment (P = 0.005) and non-tagged controls (P = 0.001); the subdermal and non-tag controls did not differ significantly (P = 0.934). The internal, subdermal and non-tag treatments retained an average of 49%, 11% and 2% of their eggs, respectively. The onset of sexual activity did not differ significantly among treatments (P = 0.413). Post-spawning mortality was 70% for both internally and subdermally tagged females and 0% for non-tagged females (P <0.01). We suggest that subdermal implantation techniques be considered in future studies during the reproductive period to reduce egg retention caused by internal implantation of transmitters.

  8. TOXICITY OF FENVALERATE TO DEVELOPING STEELHEAD TROUT FOLLOWING CONTINUOUS OR INTERMITTENT EXPOSURE

    EPA Science Inventory

    Environmental toxicant exposures commonly vary in terms of duration and concentration. However, laboratory toxicity tests usually entail continuous exposures to constant concentrations. The authors compared survival, growth, and toxicant accumulation in early life-stage steelhead...

  9. Genetic differences between hatchery and wild steelhead for growth and survival in the hatchery and seaward migration after release (Study sites: Dworshak Hatchery and Clearwater Hatchery; Stocks: Dworshak hatchery and Selway River wild; Year classes: 1994 and 1995): Chapter 2

    USGS Publications Warehouse

    Rubin, Stephen P.; Reisenbichler, Reginald R.; Hensleigh, Jay E.; Wetzel, Lisa A.; Baker, Bruce M.

    2012-01-01

    Various studies suggest that sea ranching of anadromous salmonids can result in domestication (increased fitness in the hatchery program) and a loss of fitness for natural production; however, the mechanism has not been characterized adequately. We artificially spawned hatchery and wild steelhead Oncorhynchus mykiss from the Clearwater River, Idaho, reared the resulting genetically marked (at the PEPA allozyme locus) progeny (HxH, HxW from hatchery females and wild males, and WxW) in hatcheries, and tested for differences in survival, growth, early maturation, downstream migration, and adult returns. Rearing treatments were mixed (crosses reared together) and separate (crosses reared separately from each other) at the hatchery of origin for the hatchery population where smolts are produced in one year, and at a nearby hatchery employing lower rations, lower winter temperatures, and two years of rearing to more closely mimic the natural life history (natural smolt age = 2-4 years). The hatchery population had been artificially propagated for six generations at the onset of our study. We found little or no difference in survival in the hatchery but substantially higher rates of growth and subsequent downstream migration for HxH than for WxW fish. Faster growth for HxH fish resulted in greater size at release which contributed to their higher migration rate, but other as yet uncharacterized traits also affected migration since the migration difference between crosses was apparent even within size classes. Growth of WxW fish was slower in the mixed than in the separate treatment indicating that WxW fish were competitively inferior to HxH fish in the hatchery environment. Incidence of precocious males was higher for WxW than for HxH fish in the separate but not in the mixed treatment. Incidence of HxH precocious males was similar between treatments. Apparently, the presence of HxH fish suppressed high incidence of early maturation by WxW males. A direct effect beyond

  10. Effects of salinity acclimation on the endocrine disruption and acute toxicity of bifenthrin in freshwater and euryhaline strains of Oncorhynchus mykiss.

    PubMed

    Riar, Navneet; Crago, Jordan; Jiang, Weiying; Maryoung, Lindley A; Gan, Jay; Schlenk, Daniel

    2013-12-01

    The pyrethroid insecticide bifenthrin is frequently detected at ng/L concentrations in tributaries of the San Francisco Bay Delta. The estuary is also experiencing increasing salinity through climate change and water redirection. To evaluate the impacts of hypersaline conditions on bifenthrin toxicity in anadromous salmonids of the San Francisco Bay Delta (CA, USA), a 14-d laboratory exposure was performed using 2 strains of Oncorhynchus mykiss (rainbow trout and steelhead) acclimated to freshwater and to 8 g/L and 17 g/L salinity. The fish were then exposed to nominal concentrations of 0 µg/L, 0.1 µg/L, and 1.5 µg/L bifenthrin. Rainbow trout exhibited significant mortality following exposure to 1.5 µg/L (1.07 ± 0.35 µg/L measured) bifenthrin in freshwater. Elevated levels of Na⁺ /K⁺ adenosine triphosphatase α1A mRNA subunit expression was observed in the gill of rainbow trout acclimated to hypersaline conditions relative to freshwater animals. No significant difference was noted in Na⁺ /K⁺ adenosine triphosphatase subunit levels in brains of either strain in freshwater or hypersaline conditions. Likewise, significant differences were not observed in plasma vitellogenin or steroid hormone concentrations in either strain whether maintained in freshwater or saltwater. Saltwater acclimation significantly reduced nicotinamide adenine dinucleotide phosphate-catalyzed biotransformation of bifenthrin in liver microsomes of rainbow trout but not of steelhead. The present study showed that, relative to steelhead, rainbow trout have different responses to bifenthrin acute toxicity as well as different rates of hepatic bifenthrin biotransformation and regulation of Na⁺ /K⁺ adenosine triphosphatase subunits in gills. These data indicate that significant differences exist between the strains and that animal life history may have important effects on the susceptibility of each strain to environmental contaminants. PMID:23983063

  11. A Multi-Proxy Approach to Examining Land-Use Change Effects on Steelhead Trout and Coho Salmon in NW California

    NASA Astrophysics Data System (ADS)

    Constantine, J. A.; Pasternack, G. B.; Viers, J. H.; Feliciano, J. B.

    2001-05-01

    Historically, juvenile and spawning adult steelhead trout and coho salmon were found in abundance in the Navarro Basin of NW California. However, the numbers of juvenile steelhead and spawning adults have declined greatly over the past 100 years, while coho salmon rearing and spawning is now limited to only one sub-drainage. Steelhead and coho population data taken by the DFG along with GIS images of recent land-use change are being used in conjunction with sediment core data to determine specific land-use effects on watershed geomorphology and in-stream habitat quality. The study uses historical information on land use, fish populations, and river flow along with a multi-proxy analysis of cores taken from the Navarro floodplain to reconstruct geomorphic effects of land-use change and includes geochemical, palynological, grain size, LOI, and radiocarbon analyses. An historical analysis of logging operations within the watershed indicates three periods of increased mill operations peaking in 1952 with 32 mills. Digitized aerials from 1936 show the distribution of land-uses, including large swaths of clear-cut land. When these data are combined with a 100-yr record of fish distribution and a 50 yr record of discharge, a timeline of cumulative impacts is available for comparing against the multi-proxy record. For example, results from geochemical analyses may indicate anthropogenic effects on watershed sediment transport. A spike in Hg concentration at a depth of ~5 m occurs in all cores and an increase in concentrations of Hg, Cu, Co, Ba, Cr, and Ni begins at 3 m in most. Geochemical ternary diagrams of different core locations and depths show that sediment depositing in the floodplain of sub-drainages differ from main stem sediment, indicating spatio-temporal changes in sediment source areas. A palynological investigation is being conducted which will provide data of changes in ecosystem structure through time and will aid estimates of recent sedimentation rates.

  12. Species profiles: Life histories and environmental requirements of coastal fishes and invertebrates (Pacific Southwest): Steelhead. [Salmo gairdneri

    SciTech Connect

    Barnhart, R.A.

    1986-06-01

    The steelhead Salmo gairdneri, an anadromous rainbow trout, supports an important sport fishery in the Pacific Southwest. Although native populations of steelhead have declined, these fish annually enter coastal streams from northern to southern California in years when winter stream flow is high. Steelhead ascend coastal streams from the ocean to spawn in cool, well-oxygenated waters with suitable depth, current velocity, and gravel size. After hatching, steelhead fry emerge from the gravel and begin a freshwater rearing phase that generally extends from 1 to 3 years. Rearing habitat with proper environmental conditions is extremely important to steelhead production. Excessive sedimentation reduces food production, pool depth, and cover - all important to juvenile steelhead survival. Steelhead smolts migrate during spring to saltwater, where most of their growth and sexual maturity is attained in 1 or 2 years. Attempts have increased to protect wild steelhead stocks, to maintain existing spawning and rearing habitat, to restore or enhance degraded habitat where feasible, to use artificial propagation efficiently, and to establish fishing regulations that provide quality angling for steelhead.

  13. Stock Identification of Columbia River Chinook Salmon and Steelhead Trout, 1984-1985 Annual Report.

    SciTech Connect

    Schreck, Carl B.; Sharpe, Cameron; Li, Hiram W.

    1985-09-21

    Fish were collected from 60 stocks of chinook salmon and 62 stocks of steelhead trout. Electrophoretic analyses were completed on 43 stocks of chinook salmon and 41 stocks of steelhead trout and meristic counts were completed on 43 stocks of chinook and 41 stocks of steelhead. Statistical comparisons between year classes of our electrophoretic data indicate that most enzyme systems are stable over time but some may be dynamic and should be used with caution in our analyses. We also compared neighboring stocks of both spring chinook and steelhead trout. These comparisons were between stocks of the same race from adjacent stream systems and/or hatcheries. Differences in isozyme gene frequencies can be used to estimate genetic segregation between pairs of stocks. Analysis of the chinook data suggests that, as expected, the number of statistically significant differences in isozyme gene frequencies increases as the geographic distance between stocks increases. The results from comparisons between adjacent steelhead stocks were inconclusive and must await final analysis with more data. Cluster analyses using either isozyme gene frequencies or meristic characters both tended to group the chinook and steelhead stocks by geographic areas and by race and both methods resulted in generally similar grouping patterns. However, cluster analyses using isozyme gene frequencies produced more clusters than the analyses using meristic characters probably because of the greater number of electrophoretic characters compared to the number of meristic characters. Heterozygosity values for each stock were computed using the isozyme gene frequencies. The highest heterozygosity values for chinook were observed in summer chinook and the hatchery stocks while the lowest values were observed in the spring chinook and wild stocks. The results of comparisons of heterozygosity values among areas were inconclusive. The steelhead heterozygosity values were higher in the winter stocks than in the

  14. Sexual difference in PCB concentrations of coho salmon (Oncorhynchus kisutch)

    USGS Publications Warehouse

    Madenjian, Charles P.; Schrank, Candy S.; Begnoche, Linda J.; Elliott, Robert F.; Quintal, Richard T.

    2010-01-01

    We determined polychlorinated biphenyl (PCB) concentrations in 35 female coho salmon (Oncorhynchus kisutch) and 60 male coho salmon caught in Lake Michigan (Michigan and Wisconsin, United States) during the fall of 1994 and 1995. In addition, we determined PCB concentrations in the skin-on fillets of 26 female and 19 male Lake Michigan coho salmon caught during the fall of 2004 and 2006. All coho salmon were age-2 fish. These fish were caught prior to spawning, and therefore release of eggs could not account for sexual differences in PCB concentrations because female coho salmon spawn only once during their lifetime. To investigate whether gross growth efficiency (GGE) differed between the sexes, we applied bioenergetics modeling. Results showed that, on average, males were 19% higher in PCB concentration than females, based on the 1994–1995 dataset. Similarly, males averaged a 20% higher PCB concentration in their skin-on fillets compared with females. According to the bioenergetics modeling results, GGE of adult females was less than 1% higher than adult male GGE. Thus, bioenergetics modeling could not explain the 20% higher PCB concentration exhibited by the males. Nonetheless, a sexual difference in GGE remained a plausible explanation for the sexual difference in PCB concentrations.

  15. Genetic differences between hatchery and wild steelhead for survival, growth, dispersal, and male maturation in a natural stream (Study site: Twenty-Mile Creek; Stocks: Dworshak hatchery and Selway River wild; Year classes: 1994 and 1995): Chapter 3

    USGS Publications Warehouse

    Rubin, Stephen P.; Reisenbichler, Reginald R.; Hensleigh, Jay E.; Wetzel, Lisa A.; Baker, Bruce M.; Leonetti, Frank; Stenberg, Karl D.; Slatton, Stacey L.

    2012-01-01

    This study was initiated in the early 1990s to provide managers with data comparing genetic fitness for natural rearing, as measured by survival of juveniles in freshwater, between steelhead Oncorhynchus mykiss from Dworshak National Fish Hatchery and wild steelhead from the Clearwater River, Idaho. We artificially spawned hatchery steelhead and wild steelhead from the Selway River, a Clearwater River tributary, released the resulting genetically marked (at the PEPA allozyme locus) progeny (HxH, HxW from hatchery females and wild males, and WxW) as unfed fry in a second order tributary of the South Fork Clearwater River, and monitored fish residing in the stream or emigrating from it for five years. Barrier falls prevented access to the stream by naturally produced steelhead. Over 90% of the emigrants were one or two years of age and too small to be smolts (mean fork length at age-2 = 103 mm). Per fry released, the HxH cross produced 0.64-0.83 times as many emigrants as the WxW cross (P<0.05). The HxH cross produced 0.63 times as many age-4 residuals as the WxW cross for one year-class (P=0.051) and 0.68 times as many for the other (ns). Survival from age-1 to age-4 was lower for HxH than for WxW residuals of one year-class (P<0.05) and survival from age-2 to age-4 may have been lower for HxH than for WxW residuals of the other (P=0.062). Collectively, these results indicate lower survival for HxH than for WxW fish. Size was often greater for HxH than for WxW fish indicating faster growth for the former, and condition factor was also usually greater for HxH than for WxW fish. Dispersal of fry from release sites and emigration of one- and two-year olds from the study stream were greater for WxW than for HxH fish, and apparently neither was from competitive displacement of small by larger fish. Incidence of flowing milt was higher for HxH than for WxW fish at age-2. Peak incidence of flowing milt for older residuals was similar among crosses (about 50%), but the peak

  16. 76 FR 76386 - Endangered and Threatened Species; 5-Year Reviews for 4 Distinct Population Segments of Steelhead...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-12-07

    ... Pacific salmon ESUs and steelhead DPSs in California, Oregon, Washington, and Idaho (75 FR 13082). Both... Reviews for 4 Distinct Population Segments of Steelhead in California AGENCY: National Marine Fisheries... Viable Salmonid Population framework, which relies on evaluating four key population...

  17. Epidemiological investigation of Renibacterium salmoninarum in three Oncorhynchus spp. in Michigan from 2001 to 2010.

    PubMed

    Faisal, Mohamed; Schulz, Carolyn; Eissa, Alaa; Brenden, Travis; Winters, Andrew; Whelan, Gary; Wolgamood, Martha; Eisch, Edward; VanAmberg, Jan

    2012-12-01

    Bacterial kidney disease (BKD) has caused mortalities and chronic infections in wild and farm-raised salmonids throughout the world. In the Laurentian Great Lakes of North America, BKD was associated with several large-scale mortality events of Oncorhynchus spp. throughout the 1980s and 1990s. In response to these mortality events, the state of Michigan implemented several enhanced biosecurity measures to limit the occurrence of BKD in state-operated hatcheries and gamete-collection weirs. The objectives of this study were to assess if infection levels (prevalence and intensity) of Renibacterium salmoninarum, the causative agent of BKD, have changed in broodstock and pre-stocking fingerlings of three feral Oncorhynchus spp. (Chinook salmon (O. tshawytscha), coho salmon (O. kisutch), and steelhead (O. mykiss)) over a decade, following the implementation of the enhanced biosecurity measures. Between 2001 and 2010, a total of 3,530 broodstock salmonids collected from lakes Huron and Michigan tributaries during spawning runs and 4,294 propagated pre-stocking salmonid fingerlings collected from three state of Michigan fish hatcheries were tested for the presence of R. salmoninarum antigens using the enzyme-linked immunosorbent assay. Substantial declines in the overall prevalence of the bacterium were detected in each of the examined broodstocks. Most propagated pre-stocking fingerlings also exhibited substantial declines in R. salmoninarum prevalence. Prevalence was typically higher in Chinook salmon from Lake Michigan than from Lake Huron; prevalence was also generally higher in the Hinchenbrooke strain of coho salmon than in the Michigan-adapted strain. For most strains and stocks examined, intensity of R. salmoninarum infection was found to have declined. Although there were declines in the potential for shedding the bacteria for both male and female Chinook and coho salmon, overall shedding rates were generally low (<15%) except for Hinchenbrooke coho salmon strain

  18. Differential susceptibility in steelhead trout populations to an emergent MD strain of infectious hematopoietic necrosis virus

    USGS Publications Warehouse

    Breyta, R.; Jones, Amelia; Kurath, Gael

    2014-01-01

    A significant emergence of trout-adapted MD subgroup infectious hematopoietic necrosis virus (IHNV) began in the coastal region of Washington State, USA, in 2007. This emergence event lasted until 2011 and caused both asymptomatic adult fish infection and symptomatic epidemic disease and mortality in juvenile fish. Incidence of virus during this emergence demonstrated a heterogeneous distribution among rivers of the coastal region, leaving fish populations of some rivers apparently untouched while others suffered significant and recurrent infection and mortality (Breyta et. al. 2013; Dis Aquat Org 104:179-195). In this study, we examined the possible contribution of variations in susceptibility of fish populations, age-related resistance, and virus virulence to the observed landscape heterogeneity. We found that the most significant variable was host susceptibility: by controlled experimental challenge studies steelhead trout populations with no history of IHNV infection were 1 to 3 orders of magnitude more sensitive than a fish population with a long history of IHNV infection. In addition, 2 fish populations from the same river, which descended relatively recently from a common ancestral population, demonstrated 1 to 2 orders of magnitude difference in susceptibility. Fish age-related development of resistance was most evident in the more susceptible of 2 related fish populations. Finally, the strain of virus involved in the 2007 coastal Washington emergence had high virulence but was within the range of other known M group viruses tested. These results suggest that one major driver of landscape heterogeneity in the 2007 coastal Washington IHNV emergence was variation in fish population susceptibility and that this trait may have a heritable component.

  19. Differential susceptibility in steelhead trout populations to an emergent MD strain of infectious hematopoietic necrosis virus.

    PubMed

    Breyta, Rachel; Jones, Amelia; Kurath, Gael

    2014-11-13

    A significant emergence of trout-adapted MD subgroup infectious hematopoietic necrosis virus (IHNV) began in the coastal region of Washington State, USA, in 2007. This emergence event lasted until 2011 and caused both asymptomatic adult fish infection and symptomatic epidemic disease and mortality in juvenile fish. Incidence of virus during this emergence demonstrated a heterogeneous distribution among rivers of the coastal region, leaving fish populations of some rivers apparently untouched while others suffered significant and recurrent infection and mortality (Breyta et. al. 2013; Dis Aquat Org 104:179-195). In this study, we examined the possible contribution of variations in susceptibility of fish populations, age-related resistance, and virus virulence to the observed landscape heterogeneity. We found that the most significant variable was host susceptibility: by controlled experimental challenge studies steelhead trout populations with no history of IHNV infection were 1 to 3 orders of magnitude more sensitive than a fish population with a long history of IHNV infection. In addition, 2 fish populations from the same river, which descended relatively recently from a common ancestral population, demonstrated 1 to 2 orders of magnitude difference in susceptibility. Fish age-related development of resistance was most evident in the more susceptible of 2 related fish populations. Finally, the strain of virus involved in the 2007 coastal Washington emergence had high virulence but was within the range of other known M group viruses tested. These results suggest that one major driver of landscape heterogeneity in the 2007 coastal Washington IHNV emergence was variation in fish population susceptibility and that this trait may have a heritable component. PMID:25392039

  20. Surgically Implanted JSATS Micro-Acoustic Transmitters Effects on Juvenile Chinook Salmon and Steelhead Tag Expulsion and Survival, 2010

    SciTech Connect

    Woodley, Christa M.; Carpenter, Scott M.; Carter, Kathleen M.; Wagner, Katie A.; Royer, Ida M.; Knox, Kasey M.; Kim, Jin A.; Gay, Marybeth E.; Weiland, Mark A.; Brown, Richard S.

    2011-09-16

    The purpose of this study was to evaluate survival model assumptions associated with a concurrent study - Acoustic Telemetry Evaluation of Dam Passage Survival and Associated Metrics at John Day, The Dalles, and Bonneville Dams, 2010 by Thomas Carlson and others in 2010 - in which the Juvenile Salmonid Acoustic Telemetry System (JSATS) was used to estimate the survival of yearling and subyearling Chinook salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss) migrating through the Federal Columbia River Power System (FCRPS). The micro-acoustic transmitter used in these studies is the smallest acoustic transmitter model to date (12 mm long x 5 mm wide x 4 mm high, and weighing 0.43 g in air). This study and the 2010 study by Carlson and others were conducted by researchers from the Pacific Northwest National Laboratory and the University of Washington for the U.S. Army Corps of Engineers, Portland District, to meet requirements set forth by the 2008 FCRPS Biological Opinion. In 2010, we compared survival, tag burden, and tag expulsion in five spring groups of yearling Chinook salmon (YCH) and steelhead (STH) and five summer groups of subyearling Chinook salmon (SYC) to evaluate survival model assumptions described in the concurrent study. Each tagging group consisted of approximately 120 fish/species, which were collected and implanted on a weekly basis, yielding approximately 600 fish total/species. YCH and STH were collected and implanted from late April to late May (5 weeks) and SYC were collected and implanted from mid-June to mid-July (5 weeks) at the John Day Dam Smolt Monitoring Facility. The fish were collected once a week, separated by species, and assigned to one of three treatment groups: (1) Control (no surgical treatment), (2) Sham (surgical implantation of only a passive integrated transponder [PIT] tag), and (3) Tagged (surgical implantation of JSATS micro-acoustic transmitter [AT] and PIT tags). The test fish were held for 30 days in indoor

  1. Gene Flow between Sympatric Life History Forms of Oncorhynchus mykiss Located above and below Migratory Barriers

    PubMed Central

    Van Doornik, Donald M.; Berejikian, Barry A.; Campbell, Lance A.

    2013-01-01

    Oncorhynchus mykiss have a diverse array of life history types, and understanding the relationship among types is important for management of the species. Patterns of gene flow between sympatric freshwater resident O. mykiss, commonly known as rainbow trout, and anadromous O. mykiss, commonly known as steelhead, populations are complex and poorly understood. In this study, we attempt to determine the occurrence and pathways of gene flow and the degree of genetic similarity between sympatric resident and anadromous O. mykiss in three river systems, and investigate whether resident O. mykiss are producing anadromous offspring in these rivers, two of which have complete barriers to upstream migration. We found that the population structure of the O. mykiss in these rivers appears to be influenced more by the presence of a barrier to upstream migration than by life history type. The sex ratio of resident O. mykiss located above a barrier, and smolts captured in screw traps was significantly skewed in favor of females, whereas the reverse was true below the barriers, suggesting that male resident O. mykiss readily migrate downstream over the barrier, and that precocious male maturation may be occurring in the anadromous populations. Through paternity analyses, we also provide direct confirmation that resident O. mykiss can produce offspring that become anadromous. Most (89%) of the resident O. mykiss that produced anadromous offspring were males. Our results add to the growing body of evidence that shows that gene flow does readily occur between sympatric resident and anadromous O. mykiss life history types, and indicates that resident O. mykiss populations may be a potential repository of genes for the anadromous life history type. PMID:24224023

  2. Design and Analysis of Salmonid Tagging Studies in the Columbia Basin, Volume XVI; Alternative Designs for Future Adult PIT-Tag Detection Studies, 2000 Technical Report.

    SciTech Connect

    Perez-Comas, Jose A.; Skalski, John R.

    2000-09-25

    In the advent of the installation of a PIT-tag interrogation system in the Cascades Island fish ladder at Bonneville Dam (BON), and other CRB dams, this overview describes in general terms what can and cannot be estimated under seven different scenarios of adult PIT-tag detection capabilities in the CRB. Moreover, this overview attempted to identify minimal adult PIT-tag detection configurations required by the ten threatened Columbia River Basin (CRB) chinook and steelhead ESUs. A minimal adult PIT-tag detection configuration will require the installation of adult PIT-tag detection facilities at Bonneville Dam and another dam above BON. Thus, the Snake River spring/summer and fall chinook salmon, and the Snake River steelhead will require a minimum of three dams with adult PIT-tag detection capabilities to guarantee estimates of ''ocean survival'' and at least of one independent, in-river returning adult survival (e.g., adult PIT-tag detection facilities at BON and LGR dams and at any other intermediary dam such as IHR). The Upper Columbia River spring chinook salmon and steelhead will also require a minimum of three dams with adult PIT-tag detection capabilities: BON and two other dams on the BON-WEL reach. The current CRB dam system configuration and BPA's and COE's commitment to install adult PIT-tag detectors only in major CRB projects will not allow the estimation of an ''ocean survival'' and of any in-river adult survival for the Lower Columbia River chinook salmon and steelhead. The Middle Columbia River steelhead ESU will require a minimum of two dams with adult PIT-tag detection capabilities: BON and another upstream dam on the BON-McN reach. Finally, in spite of their importance in terms of releases, PIT-tag survival studies for the Upper Willamette chinook and Upper Willamette steelhead ESUs cannot be perform with the current CRB dam system configuration and PIT-tag detection capabilities.

  3. EFFECT OF PENTACHLOROPHENOL ON THE GROWTH AND MORTALITY OF EMBRYONIC AND JUVENILE STEELHEAD TROUT

    EPA Science Inventory

    The toxicity of sodium pentachlorophenate to early life stages of steelhead trout (Salmo gairdneri) was investigated, using a flow-through exposure system. A 96-hr LC50 of 66 micrograms/l was derived for previously unexposed ten-week-old fry. A 72-day test, beginning 24 hr after ...

  4. EFFECTS OF SODIUM PENTACHLOROPHENATE ON SURVIVAL AND ENERGY METABOLISM OF EMBRYONIC AND LARVAL STEELHEAD TROUT

    EPA Science Inventory

    A study was conducted to determine the effects of technical grade sodium pentachlorophenate (Na-PCP) on the early developmental stages of the steelhead trout (Salmo gairdneri). In an experiment where embryos were exposed to Na-PCP from fertilization to hatching, 100% mortality oc...

  5. 77 FR 1669 - Endangered and Threatened Species; Recovery Plan for the Southern California Steelhead Distinct...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-01-11

    ... (67 FR 21586). NMFS reaffirmed the listing of all West Coast steelhead populations and applied the DPS designation in place of the ESU designation on January 5, 2006 (72 FR 834). We published a Notice of... Federal ] Register on August 18, 1997 (62 FR 43937). The original ESU boundaries during the...

  6. Development of a Willingness to Pay Survey for Willamette Basin Spring Chinook and Winter Steelhead Recovery

    EPA Science Inventory

    Salmon fisheries are a high-profile icon of the Pacific Northwest. Spring Chinook and winter-run steelhead are both listed as federally endangered species in the Willamette basin, the most populated and developed watershed in Oregon. Despite being a high profile issue, there are ...

  7. TOXICITY OF TRIVALENT CHROMIUM TO EARLY LIFE STAGES OF STEELHEAD TROUT

    EPA Science Inventory

    Acute and early life stage toxicity tests were conducted with trivalent chromium and steelhead trout (Salmo gairdneri). A 96-h LC50 of 4,400 micrograms/l chromium was obtained with two-month-old juvenile fish. Early life stage exposure from newly fertilized eggs to 30-d post-swim...

  8. STABLE ISOTOPE SIGNATURES OF MUCUS OF STEELHEAD TROUT IN A CONTROLLED DIET SWITCH EXPERIMENT

    EPA Science Inventory

    Our work has shown that fish mucus can serve as a very rapid indicator of diet switching in fish. We performed diet switching studies of steelhead trout in a controlled hatchery setting using specially formulated low delta 15N signature and high delta 15N signature diets. To ou...

  9. SURVIVAL OF STEELHEAD TROUT (SALMO GAIRDNERI) EGGS, EMBRYOS, AND FRY IN AIR-SUPERSATURATED WATER

    EPA Science Inventory

    Egg, embryo, fry, and swim-up stages of steelhead trout (Salmo gairdneri) were exposed to water at total gas saturation levels ranging from 130 to 115%. Eggs, embryos, and newly hatched fry were not affected at 126.7%, but at about day 16 posthatch when the fish began swimming up...

  10. Kidney disease postorbital lesions in spring chinook salmon (Oncorhynchus tshawytscha)

    USGS Publications Warehouse

    Hendricks, Jerry D.; Leek, Steve L.

    1975-01-01

    Gross exophthalmos in one or both eyes of yearling spring chinook salmon (Oncorhynchus tshawytscha) was caused by postorbital, granulomatous inflammatory tissue that developed in response to invasion of the site by Corynebacterium sp., the causative agent of bacterial kidney disease.

  11. Evaluation of a prototype surface flow bypass for juvenile salmon and steelhead at the powerhouse of Lower Granite Dam, Snake River, Washington, 1996-2000

    USGS Publications Warehouse

    Johnson, G.E.; Anglea, S.M.; Adams, N.S.; Wik, T.O.

    2005-01-01

    A surface flow bypass takes advantage of the natural surface orientation of most juvenile salmon Oncorhynchus spp. and steelhead O. mykiss by providing a route in the upper water column that downstream migrant fishes can use to pass a hydroelectric dam safely. A prototype structure, called the surface bypass and collector (SBC), was retrofitted on the powerhouse of Lower Granite Dam and was evaluated annually with biotelemetry and hydroacoustic techniques during the 5-year life span of the structure (1996-2000) to determine the entrance configuration that maximized passage efficiency and minimized forebay residence time. The best tested entrance configuration had maximum inflow (99 m 3/s) concentrated in a single surface entrance (5 m wide, 8.5 m deep). We identified five important considerations for future surface flow bypass development in the lower Snake River and elsewhere: (1) an extensive flow net should be formed in the forebay by use of relatively high surface flow bypass discharge (>7% of total project discharge); (2) a gradual increase in water velocity with increasing proximity to the surface flow bypass (ideally, acceleration 3 m/s) to entrain the subject juvenile fishes; (4) the shape and orientation of the surface entrance(s) should be adapted to fit site-specific features; and (5) construction of a forebay wall to increase fish availability to the surface flow bypass should be considered. The efficiency of the SBC was not high enough (maximum of 62% relative to passage at turbine units 4-5) for the SBC to operate as a stand-alone bypass. Anywhere that surface-oriented anadromous fish must negotiate hydroelectric dams, surface flow bypass systems can provide cost-effective use of typically limited water supplies to increase the nonturbine passage, and presumably survival, of downstream migrants. ??Copyright by the American Fisheries Society 2005.

  12. Recombinant interleukin-1β dilates steelhead trout coronary microvessels: effect of temperature and role of the endothelium, nitric oxide and prostaglandins

    PubMed Central

    Costa, Isabel A. S. F.; Hein, Travis W.; Secombes, Christopher J.; Gamperl, A. Kurt

    2015-01-01

    ABSTRACT Interleukin (IL)-1β is associated with hypotension and cardiovascular collapse in mammals during heat stroke, and the mRNA expression of this pro-inflammatory cytokine increases dramatically in the blood of Atlantic cod (Gadus morhua) at high temperatures. These data suggest that release of IL-1β at high temperatures negatively impacts fish cardiovascular function and could be a primary determinant of upper thermal tolerance in this taxa. Thus, we measured the concentration-dependent response of isolated steelhead trout (Oncorhynchus mykiss) coronary microvessels (<150 μm in diameter) to recombinant (r) IL-1β at two temperatures (10 and 20°C). Recombinant IL-1β induced a concentration-dependent vasodilation with vessel diameter increasing by approximately 8 and 30% at 10−8 and 10−7 mol l−1, respectively. However, this effect was not temperature dependent. Both vessel denudation and cyclooxygenase blockade (by indomethacin), but not the nitric oxide (NO) antagonist L-NIO, inhibited the vasodilator effect of rIL-1β. In contrast, the concentration-dependent dilation caused by the endothelium-dependent calcium ionophore A23187 was completely abolished by L-NIO and indomethacin, suggesting that both NO and prostaglandin signaling mechanisms exist in the trout coronary microvasculature. These data: (1) are the first to demonstrate a functional link between the immune and cardiovascular systems in fishes; (2) suggest that IL-1β release at high temperatures may reduce systemic vascular resistance, and thus, the capacity of fish to maintain blood pressure; and (3) provide evidence that both NO and prostaglandins play a role in regulating coronary vascular tone, and thus, blood flow. PMID:26026045

  13. Evaluation of Fishway Designs for Downstream Passage of Spring Chinook Salmon and Steelhead Trout Smolts, 1987 Final Report.

    SciTech Connect

    Congleton, J.L.; Wagner, E.J.; Ringe, R.R.

    1988-03-01

    The stress response of chinook salmon and steelhead trout smolts to passage through three different flumes was tested by assaying plasma cortisol concentrations before and after flume passage. In addition, descaling of fish was recorded before and after flume passage, and the ability of the flumes to pass adult chinook salmon and debris was determined. The three flumes were a corrugated metal flume (CMF), a 4- foot wide baffled flume (BF4), and a 2-foot wide baffled flume (BF2). Each flume was tested under conditions: 1) at night, 2) during the day with a perforated metal cover, which reduced the amount of light entering the flume by about half (partially darkened), and 3) during the day with the perforated cover and additional double layer of black plastic (completely darkened). Plasma cortisol concentrations were not significantly elevated in chinook salmon smolts after passage through any of the flumes (P>0.2, ANOVA). In daytime tests of partially and completely darkened flumes cortisol concentrations were consistently decreased following flume passage. We attribute this to pre-test stress (holding of fish in small tanks) and to the absence of a strong stress response to flume passage. Flume design did not have a significant effect on cortisol concentrations (P=0.9).Total darkening of the flumes during daytime was beneficial: cortisol concentrations were lower (P=0.03) in chinook salmon smolts passing through completely darkened flumes than in smolts passing through partially darkened flumes. 16 refs., 15 figs.

  14. Predicted time from fertilization to maximum wet weight for steelhead alevins based on incubation temperature and egg size (Study site: Western Fishery Research Center, Seattle; Stock: Dworshak hatchery; Year class: 1996): Chapter 4

    USGS Publications Warehouse

    Rubin, Stephen P.; Reisenbichler, Reginald R.; Slatton, Stacey L.

    2012-01-01

    The accuracy of a model that predicts time between fertilization and maximum alevin wet weight (MAWW) from incubation temperature was tested for steelhead Oncorhynchus mykiss from Dworshak National Fish Hatchery on the Clearwater River, Idaho. MAWW corresponds to the button-up fry stage of development. Embryos were incubated at warm (mean=11.6°C) or cold (mean=7.3°C) temperatures and time between fertilization and MAWW was measured for each temperature. Model predictions of time to MAWW were within 1% of measured time to MAWW. Mean egg weight ranged from 0.101-0.136 g among females (mean = 0.116). Time to MAWW was positively related to egg size for each temperature, but the increase in time to MAWW with increasing egg size was greater for embryos reared at the warm than at the cold temperature. We developed equations accounting for the effect of egg size on time to MAWW for each temperature, and also for the mean of those temperatures (9.3°C).

  15. Benefits of increased streamflow: The case of the John Day River Steelhead Fishery

    NASA Astrophysics Data System (ADS)

    Johnson, Neal S.; Adams, Richard M.

    1988-11-01

    Conflicts between instream water uses such as fish production and traditional out-of-stream uses are an important water resource issue. One criterion for evaluating the merits of alternative water allocations is economic efficiency. This study uses an integrated approach to measure the recreational steelhead fishery benefits of incremental streamflow changes in the John Day River in Oregon. The analysis combines a steelhead fishery production model with a contingent valuation assessment of changes in fishing quality to obtain estimates of the marginal value of water in producing fishing quality. The results suggest that increased summer flows to enhance fishing have a marginal value of about $2.40 acre-foot. When expressed in terms of water actually consumed, the value may be up to 10 times higher. These values are sensitive to the location of flow alterations in the river, potential for downstream uses and number of anglers in the fishery.

  16. Monitoring of Downstream Salmon and Steelhead at Federal Hydroelectric Facilities, 1991 Annual Report.

    SciTech Connect

    Hawkes, Lynette A.; Martinson, Rick D.; Smith, W. William

    1992-04-01

    The 1991 smolt monitoring project of the National Marine Fisheries Service provided data on the seaward migration of juvenile salmon and steelhead at John Day, The Dalles and Bonneville Dams. All pertinent fish capture and condition data as well as dam operations and river flow data were provided to Fish Passage Center for use in developing fish passage indices and migration timing, and for water budget and spill management.

  17. Monitoring of Downstream Salmon and Steelhead at Federal Hydroelectric Facilities, 1988 Annual Report.

    SciTech Connect

    Johnsen, Richard C.

    1988-12-01

    The 1988 smolt monitoring project of the National Marine Fisheries Service provided data on the seaward migration of juvenile salmon and steelhead at Lower Granite, Mcnary, John Day, and Bonneville Dams. All pertinent fish capture and condition data as well as dam operations and river flow data were provided to the FPDIS for use by FPC in developing fish passage indices and migration timing, and for water budget and spill management. 13 refs., 100 figs.

  18. Self-sustaining populations, population sinks or aggregates of strays: chum (Oncorhynchus keta) and Chinook salmon (Oncorhynchus tshawytscha) in the Wood River system, Alaska.

    PubMed

    Lin, Jocelyn E; Hilborn, Ray; Quinn, Thomas P; Hauser, Lorenz

    2011-12-01

    Small populations can provide insights into ecological and evolutionary aspects of species distributions over space and time. In the Wood River system in Alaska, USA, small aggregates of Chinook (Oncorhynchus tshawytscha) and chum salmon (O. keta) spawn in an area dominated by sockeye salmon (O. nerka). Our objective was to determine whether these Chinook and chum salmon are reproductively isolated, self-sustaining populations, population sinks that produce returning adults but receive immigration, or strays from other systems that do not produce returning adults. DNA samples collected from adult chum salmon from 16 streams and Chinook salmon from four streams in the Wood River system over 3 years were compared to samples from large populations in the nearby Nushagak River system, a likely source of strays. For both species, microsatellite markers indicated no significant genetic differentiation between the two systems. Simulations of microsatellite data in a large source and a smaller sink population suggested that considerable immigration would be required to counteract the diverging effects of genetic drift and produce genetic distances as small as those observed, considering the small census sizes of the two species in the Wood River system. Thus, the Wood River system likely receives substantial immigration from neighbouring watersheds, such as the Nushagak River system, which supports highly productive runs. Although no data on population productivity in the Wood River system exist, our results suggest source-sink dynamics for the two species, a finding relevant to other systems where salmonid population sizes are limited by habitat factors. PMID:22026559

  19. Different prevalences of Renibacterium salmoninarum detected by ELISA in Alaskan chinook salmon Oncorhynchus tshawytscha spawned from freshwater and seawater.

    PubMed

    Meyers, T R; Thrower, F; Short, S; Lipson, K; Joyce, J; Farrington, C; Doherty, S

    1999-01-29

    Soluble antigen of Renibacterium salmoninarum (Rs) was detected by a polyclonal enzyme-linked immunosorbent assay (ELISA) at significantly higher prevalences in adult chinook salmon Oncorhynchus tshawytscha that matured in freshwater than in the same cohort of fish spawned after maturation in seawater. The cumulative results were consistent during 4 yr of comparison at the Little Port Walter Hatchery on Baranof Island, Alaska, USA. Possible causes for this difference are discussed. Maturation of chinook salmon broodstock in seawater has become a practical strategy at this hatchery to reduce the prevalence of Rs-positive parent fish and the numbers of culled eggs. PMID:10092972

  20. Monitoring of Downstream Salmon and Steelhead at Federal Hydroelectric Facilities, 2003 Annual Report.

    SciTech Connect

    Martinson, Rick D.; Kamps, Jeffrey W.; Kovalchuk, Gregory M.

    2004-02-01

    The 2003 spring flows were within 7 kcfs of last year's flows, but the summer flows were significantly lower, averaging 194 kcfs compared to 278 kcfs last year. Late summer and fall flows were within 20 kcfs of last year's flows. These flow levels provided good migration conditions for juvenile salmonids, comparable to last year, except in June and July. Monthly average river flows were lower than the historical averages. The number of fish handled at John Day decreased from 257,741 last year to 166,209 this year. Part of this decline is due to reduced research effort which lowers the total number of fish needed. Descaling, compared to last year, varied by species, increasing for yearling chinook and clipped and unclipped steelhead, decreasing for coho and sockeye, and remaining about the same for subyearling chinook. Descaling was well below the average for the airlift years for all species except unclipped steelhead. This may be a function of unclipped hatchery steelhead being counted as unclipped steelhead, a category traditionally reserved for wild steelhead. Mortality continues to be low, at or below last year's levels for yearling chinook, subyearling chinook, clipped steelhead and sockeye; slightly higher than last year for unclipped steelhead and coho. With the exception of sockeye, mortality rates at the new facility are well below the average for the years of sampling with the airlift system. The spring migrants generally started migrating later and finished earlier, for a shorter overall duration. Sub-yearling chinook did just the opposite, starting earlier and ending later for a longer middle 80% duration. This was the fourth year of index level sampling at the Hamilton Island Juvenile Monitoring Facility at Bonneville. The number of fish handled declined from 85,552 last year to 80,303 this year. Descaling for all species was similar to the previous two years (within 2%) but in all cases lower than the historical average. Mortality was lower than last

  1. Monitoring of Downstream Salmon and Steelhead at Federal Hydroelectric Facilities, 2004-2005 Annual Report.

    SciTech Connect

    Martinson, Rick D.; Kamps, Jeffrey W.; Kovalchuk, Gregory M.

    2005-02-02

    The 2004 river flows were near or below the historical average for each month of the fish passage season (Mar-Oct) at John Day and Bonneville. These flow levels provided average migration conditions for juvenile salmonids, comparable to 2003. The number of fish handled at John Day increased from 166,209 in 2003 to 412,797 in 2004. This dramatic increase is due entirely to an increased sample rate to get fish for researchers, from an average of 8.5% last year to 18.5% this year. In the spring, 83% of fish sampled were for research, and in the fall, 92% were for research. Unusually small subyearling Chinook, on average 10 millimeters shorter than last year, made meeting the 110 mm fork length or 13 gram requirement difficult. Consequently, we had to sample even more fish to get the number required by researchers. Passage timing at John Day was similar to previous years, with the 10% and 90% dates within a week of last year for all species. Descaling was lower than last year for all species except sockeye and below the historical average for all species. At 5.4%, sockeye descaling was 2% higher than any other species. Mortality, while up from last year for all species and higher than the historical average for all species except sockeye, continued to be low, below 1% for all species. The number of fish sampled at Bonneville was five and one half times the number sampled last year, from 80,687 to 444,580. Like John Day, this increase resulted from research fish collections. Passage timing at Bonneville was early for spring migrants, with record early 10%, 50%, and 90% dates for yearling Chinook, unclipped steelhead, and coho. Clipped steelhead also passed Bonneville earlier than normal, with record early 50% and 90% dates and only missing the 10% date by two days. Sockeye were the exception this year with the 10% date only a couple of days different than the 50% date for three previous years and the latest 90% date of any year, except of 2001. The middle 80% of the

  2. Potential effects of changes in temperature and food resources on life history trajectories of juvenile Oncorhynchus mykiss

    USGS Publications Warehouse

    Benjamin, Joseph R.; Connolly, Patrick J.; Romine, Jason G.; Perry, Russell W.

    2013-01-01

    Increasing temperatures and changes in food resources owing to climate change may alter the growth and migratory behavior of organisms. This is particularly important for salmonid species like Oncorhynchus mykiss, where some individuals remain in freshwater to mature (nonanadromous Rainbow Trout) and others migrate to sea (anadromous Steelhead). Whether one strategy is adopted over the other may depend on the individual's growth and size. In this study, we explored (1) how water temperature in Beaver Creek, a tributary to the Methow River, Washington, may increase under four climate scenarios, (2) how these thermal changes may alter the life history trajectory followed by O. mykiss (i.e., when and if to smolt), and (3) how changes in food quality or quantity might interact with increasing temperatures. We combined bioenergetic and state-dependent life history models parameterized for O. mykiss in Beaver Creek to mimic baseline life history trajectories. Based on our simulations, when mean water temperature was increased by 0.6°C there was a reduction in life history diversity and a 57% increase in the number of individuals becoming smolts. When mean temperature was increased by 2.7°C, it resulted in 87% fewer smolts than in the baseline and fewer life history trajectories expressed. A reduction in food resources led to slower growth, more life history trajectories, and a greater proportion of smolts. In contrast, when food resources were increased, fish grew faster, which reduced the proportion of smolts and life history diversity. Our modeling suggests that warmer water temperatures associated with climate change could decrease the life history diversity of O. mykiss in the central portion of their range and thereby reduce resiliency to other disturbances. In addition, changes in food resources could mediate or exacerbate the effect of water temperature on the life history trajectories of O. mykiss.

  3. Steelhead of the south-central/southern California coast: Population characterization for recovery planning

    USGS Publications Warehouse

    Boughton, David A.; Adams, P.B.; Anderson, E.; Fusaro, Craig; Keller, E.; Kelley, Elsie; Lentsch, Leo; Nielsen, J. L.; Perry, Katie; Regan, Helen; Swift, C.; Watson, Fred

    2006-01-01

    This report by the National Marine Fisheries Service applies a formal evaluation framework to the problem of delineating Oncorhynchus mykiss populations in the South-Central/Southern California Coast recovery domain, in support of recovery planning under the Endangered Species Act.

  4. Family size and effective population size in a hatchery stock of coho salmon (Oncorhynchus kisutch)

    USGS Publications Warehouse

    Simon, R.C.; McIntyre, J.D.; Hemmingsen, A.R.

    1986-01-01

    Means and variances of family size measured in five year-classes of wire-tagged coho salmon (Oncorhynchus kisutch) were linearly related. Population effective size was calculated by using estimated means and variances of family size in a 25-yr data set. Although numbers of age 3 adults returning to the hatchery appeared to be large enough to avoid inbreeding problems (the 25-yr mean exceeded 4500), the numbers actually contributing to the hatchery production may be too low. Several strategies are proposed to correct the problem perceived. Argument is given to support the contention that the problem of effective size is fairly general and is not confined to the present study population.

  5. Differences in survival and growth in hatchery and stream environments, and in maturation of residuls in a stream, between progeny of hatchery and wild steelhead (Study sites: Brushy Fork Creek and Dworshak Hatchery; Stocks:Dworshak hatchery and Fish Creek wild; Year classes: 1992 and 1993): Chapter 1

    USGS Publications Warehouse

    Rubin, Stephen P.; Reisenbichler, Reginald R.; Wetzel, Lisa A.; Hensleigh, Jay E.; Leonetti, Frank

    2012-01-01

    Freshwater survival in hatchery and natural rearing environments was compared between progeny of hatchery (H) and wild (W) steelhead Oncorhynchus mykiss from the Clearwater River drainage in Idaho. Adults from Dworshak National Fish Hatchery and wild adults from Fish Creek fish were artificially spawned, and their progeny were genetically marked at the PEPA allozyme locus and released together as unfed fry in production facilities at the hatchery and in Brushy Fork Creek, also in the Clearwater River drainage, in a common garden design. Survival was higher for H than for W progeny at the hatchery but lower for H than for W progeny in Brushy Fork, indicating reduced fitness of the hatchery population for natural rearing and suggesting domestication as the cause. Survival at the hatchery was lower than is typical due to disease outbreaks. Survival of the first year-class of experimental fish to smolt release was only 18%. Survival of H fish was 3.8 times that of W fish under these poor survival conditions. All fish from the second year-class died halfway through the scheduled 10 month rearing period. Survival of H fish was 5.2 times that of W fish to when 1% of the initial fry were still alive indicating that W fish succumbed to the epizootic sooner than did H fish. Emigrants from the Brushy Fork study reach were sampled for three years and fish residing in the study reach were sampled for six years following fry release. Most emigrants were one or two years old and too small to be smolts (mean fork length at age-2 = 93 mm). Survival in Brushy Fork was lower for H than for W fish of the first year-class. Survival of the second year-class was higher for H than for W fish during the first two months in the stream but was lower for H than for W fish thereafter, and net survival from release to ages 3 and older was also lower for H than for W fish if our emigrant samples were representative (periods of inoperative emigrant traps prevented certainty about this

  6. Effect of a heavy metal model mixture on biological parameters of rainbow trout Oncorhynchus mykiss.

    PubMed

    Vosyliene, Milda Zita; Kazlauskiene, Nijole; Svecevicius, Gintaras

    2003-01-01

    The effects of a model mixture (HMMM) of seven heavy metals (Cu, Zn, Ni, Cr, Pb, Cd, Mn) on the rainbow trout Oncorhynchus mykiss at all stages of development (embryos, larvae, adults) were investigated based on the annual average concentrations of these metals in cooling waste waters discharging from Ignalina Nuclear Power Plant (Lithuania) into the Drŭksiai lake. According to mortality parameters, the most sensitive to HMMM were larvae, although no significant differences between the sensitivity of embryos and adult fish to HMMM were found. Maximal toxic effect of HMMM was observed during the hatching period. Long-term exposure to sublethal concentrations of HMMM affected embryo development, growth of larvae, their cardio-respiratory and behavioural responses, induced significant changes in morphological, morpho-physiological, physiological and haematological parameters of adult fish. Respiratory responses and growth parameters of fish were found to be the most sensitive to low concentrations of HMMM. Adult fish were capable of detecting and avoiding low, sublethal concentrations of HMMM. Heavy metals in a mixture at low concentrations were more toxic than single ones. According to the background of the damages induced by HMMM, after-effects in a fish organism, as well as in a whole population, can be predicted. PMID:12729042

  7. Toxicokinetics of perfluorooctane sulfonate in rainbow trout (Oncorhynchus mykiss)

    EPA Science Inventory

    Rainbow trout (Oncorhynchus mykiss) confined to respirometer-metabolism chambers were dosed with perfluorooctane sulfonate (PFOS) by intra-arterial injection and sampled to obtain concentration time-course data for plasma, and either urine or expired water. The data were then an...

  8. Nomenclature of mitochondrial DNA haplotypes for Oncorhynchus mykiss

    USGS Publications Warehouse

    Graziano, Sara L.; Brown, K.H.; Nielsen, Jennifer L.

    2005-01-01

    Congruence of genetic data is critical for comparative and collaborative studies on natural fish populations. A comprehensive list of reported mitochrondrial DNA haplotypes for Oncorhynchus mykiss generated using the S-Phe/P2 primer set is presented as a resource for future investigations of this species.

  9. Cryopreservation of sperm of the endangered gila trout, Oncorhynchus gilae

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Gila trout, Oncorhynchus gilae, are native to the headwaters of the Gila River drainage in New Mexico and Arizona and the headwaters of the Verde River drainage in Arizona. The species is currently protected as endangered under the Endangered Species Act. Cryopreservation of sperm is now a widely us...

  10. Nomenclature of mitochondrial DNA haplotypes for Oncorhynchus mykiss

    USGS Publications Warehouse

    Graziano, S.L.; Brown, K.H.; Nielsen, J.L.

    2005-01-01

    Congruence of genetic data is critical for comparative and collaborative studies on natural fish populations. A comprehensive list of reported mitochrondrial DNA haplotypes for Oncorhynchus mykiss generated using the S-Phe/P2 primer set is presented as a resource for future investigations of this species. ?? Copyright by the American Fisheries Society 2005.

  11. Stabilizing Oils from Smoked Pink Salmon (Oncorhynchus gorbuscha)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Smoking of meats and fish is one of the earliest preservation technologies developed by humans. In this study, the smoking process was evaluated as a method for reducing oxidation of Pink Salmon (Oncorhynchus gorbuscha) oils and also maintaining the quality of oil in aged fish prior to oil extractio...

  12. Monitoring of Downstream Salmon and Steelhead at Federal Hydroelectric Facilities, 2005-2006 Annual Report.

    SciTech Connect

    Martinson, Rick D.; Kovalchuk, Gregory M.; Ballinger, Dean

    2006-04-01

    2005 was an average to below average flow year at John Day and Bonneville Dams. A large increase in flow in May improved migration conditions for that peak passage month. Spill was provided April through August and averaged about 30% and 48% of river flow at John Day and Bonneville Dams, respectively. Water temperature graphs were added this year that show slightly lower than average water temperature at John Day and slightly higher than average temperatures at Bonneville. The number of fish handled at John Day decreased from 412,797 in 2004 to 195,293 this year. Of the 195,293 fish, 120,586 (61.7%) were collected for researchers. Last year, 356,237 (86.3%) of the fish sampled were for researchers. This dramatic decline is the result of (1) fewer research fish needed (2) a smaller, lighter tag which allowed for tagging of smaller fish, and (3) a larger average size for subyearling chinook. These factors combined to reduce the average sample rate to 10.8%, about half of last year's rate of 18.5%. Passage timing at John Day was similar to previous years, but the pattern was distinguished by larger than average passage peaks for spring migrants, especially sockeye. The large spike in mid May for sockeye created a very short middle 80% passage duration of just 16 days. Other spring migrants also benefited from the large increase in flow in May. Descaling was lower than last year for all species except subyearling chinook and below the historical average for all species. Conversely, the incidence of about 90% of the other condition factors increased. Mortality, while up from last year for all species and higher than the historical average for all species except sockeye, continued to be low, less than 1% for all species. On 6 April a slide gate was left closed at John Day and 718 fish were killed. A gate position indicator light was installed to prevent reoccurrences. Also added this year was a PIT tag detector on the adult return-to-river flume. For the first time this

  13. Survival and Passage of Yearling and Subyearling Chinook Salmon and Steelhead at The Dalles Dam, 2010

    SciTech Connect

    Johnson, Gary E.; Skalski, J. R.; Carlson, Thomas J.; Ploskey, Gene R.; Weiland, Mark A.; Deng, Zhiqun; Fischer, Eric S.; Hughes, James S.; Khan, Fenton; Kim, Jin A.; Townsend, Richard L.

    2011-12-01

    The acoustic telemetry study reported here was conducted by researchers at Pacific Northwest National Laboratory (PNNL) and the University of Washington (UW) for the U.S. Army Corps of Engineers, Portland District (USACE). The purpose of the study was to estimate dam passage survival and other performance measures for yearling and subyearling Chinook salmon and steelhead at The Dalles Dam as stipulated by the 2008 Biological Opinion on operation of the Federal Columbia River Power System (FCRPS) and 2008 Columbia Basin Fish Accords.

  14. Effect of developmental stage of unfed fry on survival and growth of steelhead released in a stream and hatchery ponds (Study sites: Dworshak Hatchery and North Fork Palouse River; Stock: Dworshak hatchery; Year class: 1996): Chapter 6

    USGS Publications Warehouse

    Rubin, Stephen P.; Reisenbichler, Reginald R.; Wetzel, Lisa A.; Stenberg, Karl D.

    2012-01-01

    We tested whether differences in developmental stage of unfed fry at release affected subsequent survival and growth of steelhead Oncorhynchus mykiss in a stream and hatchery ponds. Differences in development were created by artificially spawning hatchery steelhead from the Clearwater River, Idaho, and incubating their progeny at three different temperatures (means=10.9, 11.3, and 11.7°C). Time between fertilization and maximum alevin wet weight (MAWW) was predicted from incubation temperature using a model. MAWW is equivalent to the button - up fry stage of development. Developmental stages at release were “underdeveloped” (97.7% of model - predicted time to MAWW, mean weight=0.177 g, proportion yolk=0.087), “intermediate” (102.5%, 0.179 g, 0.044), and “overdeveloped” (107.9%, 0.156 g, 0.030). Neither survival nor growth in the hatchery to near the end of the standard one year rearing period differed among groups. In the stream, frequency of overdeveloped fish relative to the other two groups decreased fro m release in May to September, probably indicating lower survival for the overdeveloped fish during that interval since emigration of sub - yearlings is typically negligible. Length in September was less for overdeveloped than for intermediate fish and was in between for underdeveloped fish, suggesting that growth between May and September was less for overdeveloped fish than for intermediate fish. Although changes in relative frequency and size occurred among fry development groups from September to one ye ar later, those changes may have reflected differences in emigration rate during the interval rather than differential survival or growth. Our results show a cost to survival and growth in a stream, but not in a hatchery, from overdevelopment characterize d by loss of weight and yolk reserves relative to fry closer to MAWW at release. We didn’t find any cost from underdevelopment; however, our underdeveloped fry were closer to MAWW than the

  15. 50 CFR 660.402 - Definitions.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... Sockeye (red) salmon, Oncorhynchus nerka Steelhead (rainbow trout), Oncorhynchus mykiss Total length of... salmon and steelhead in the fishery management area by a person authorized by the Makah Tribe to...

  16. 50 CFR 660.402 - Definitions.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ...) salmon, Oncorhynchus nerka Steelhead (rainbow trout), Oncorhynchus mykiss Total length of salmon means... steelhead in the fishery management area by a person authorized by the Makah Tribe to exercise...

  17. 50 CFR 660.402 - Definitions.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ...) salmon, Oncorhynchus nerka Steelhead (rainbow trout), Oncorhynchus mykiss Total length of salmon means... steelhead in the fishery management area by a person authorized by the Makah Tribe to exercise...

  18. 50 CFR 660.402 - Definitions.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... Sockeye (red) salmon, Oncorhynchus nerka Steelhead (rainbow trout), Oncorhynchus mykiss Total length of... salmon and steelhead in the fishery management area by a person authorized by the Makah Tribe to...

  19. Monitoring and Evaluation of Smolt Migration in the Columbia Basin : Volume XVIII: Survival and Transportation Effects of Migrating Snake River Wild Chinook Salmon and Steelhead: Historical Estimates From 1996-2004 and Comparison to Hatchery Results. Draft.

    SciTech Connect

    Buchanan, Rebecca A.; Skalski, John R.; Broms, Kristin

    2008-12-03

    The combined juvenile and adult detection histories of PIT-tagged wild salmonids migrating through the Federal Columbia River Power System (FCRPS) were analyzed using the ROSTER (River-Ocean Survival and Transportation Effects Routine) statistical release-recapture model. This model, implemented by software Program ROSTER, was used to estimate survival on large temporal and spatial scales for PIT-tagged wild spring and summer Chinook salmon and steelhead released in the Snake River Basin upstream of Lower Granite Dam from 1996 to 2004. In addition, annual results from wild salmonids were compared with results from hatchery salmonids, which were presented in a previous report in this series (Buchanan, R. A., Skalski, J. R., Lady, J. L., Westhagen, P., Griswold, J., and Smith, S. 2007, 'Survival and Transportation Effects for Migrating Snake River Hatchery Chinook Salmon and Steelhead: Historical Estimates from 1996-2003', Technical report, Bonneville Power Administration, Project 1991-051-00). These results are reported here. Annual estimates of the smolt-to-adult return ratio (SAR), juvenile inriver survival from Lower Granite to Bonneville, the ocean return probability from Bonneville to Bonneville, and adult upriver survival from Bonneville to Lower Granite are reported. Annual estimates of transport-inriver (T/I) ratios and differential post-Bonneville mortality (D) are reported on a dam-specific basis for release years with sufficient numbers of wild PIT-tagged smolts transported. Transportation effects are estimated only for dams where at least 1,000 tagged wild smolts were transported from a given upstream release group. Because few wild Chinook salmon and steelhead tagged upstream of Lower Granite Dam were transported before the 2003 release year, T/I and D were estimated only for the 2003 and 2004 release years. Performance measures include age-1-ocean adult returns for steelhead, but not for Chinook salmon. Spring and summer Chinook salmon release groups

  20. Effect of size of unfed fry at release on survival and growth of juvenile steelhead in streams and a hatchery (Study sites: Dworshak Hatchery, Silver Creek, and Twenty-Mile Creek; Stock: Dworshak hatchery; Year classes: 1996 and 1999): Chapter 7

    USGS Publications Warehouse

    Rubin, Stephen P.; Reisenbichler, Reginald R.; Wetzel, Lisa A.; Stenberg, Karl D.

    2012-01-01

    We tested whether differences in size of unfed fry at release affected survival and growth of juvenile steelhead Oncorhynchus mykiss in hatchery ponds and streams. Differences in fry size were produced by selecting and spawning females that differed in the mean size of their eggs. Experiments were initiated in 1996 and 1999 with hatchery steelhead returning to the Clearwater River, Idaho. Fry size groups were small (mean fork length=26.7 mm, mean weight=0.149 g) and large (28.1 mm, 0.197 g) in 1996 and small (27.5 mm, 0.159 g), medium (28.2 mm, 0.190 g), and large (28.9 mm, 0.201 g) in 1999. Survival in the hatchery to near the end of the standard one year rearing period and in streams to late summer, three months after release, was higher for the large than for the small group in 1996 but was similar among groups in 1999. Survival in streams to age - 1 appeared to show the same pattern (large>small in 1996; no difference in 1999), but differences among fry size groups in emigration as well as mortality may have been involved. The inconsistency between years may have resulted because some 1996 female parents of the small group had exceptionally small eggs and were a year younger than the other 1996 females and all 1999 females. Growth in the hatchery was similar among groups in both years whereas growth in streams was faster for the large than for the small group in both years and intermediate for the medium group in 1999. Growth in streams appeared to be limited by food availability. Initially large fry probably out - competed smaller fry for limited food; however, we found no evidence that dispersal from release sites or emigration from streams was caused by competitive displacement of small by larger fish. 

  1. Effects of pyrethroid insecticides in urban runoff on Chinook salmon, steelhead trout, and their invertebrate prey.

    PubMed

    Weston, Donald P; Schlenk, Daniel; Riar, Navneet; Lydy, Michael J; Brooks, Marjorie L

    2015-03-01

    Pyrethroid insecticides can affect salmonids either indirectly through toxicity to their prey or directly by toxicity to the fish themselves. In support of a study on pyrethroid impacts to Chinook salmon and steelhead trout in the American River (Sacramento, California, USA), 96-h median effective concentration (EC50) and median lethal concentration (LC50) values for the pyrethroid bifenthrin were determined for taxa not traditionally used for toxicity testing but of interest as salmonid prey, including a chironomid, caddisflies, mayflies, and stoneflies. A laboratory was constructed on the banks of the American River to expose macroinvertebrates, Chinook salmon, and steelhead trout to flow-through river water containing urban runoff during storm events. Bifenthrin from urban runoff was found in river water following 5 rain events, reaching 14.6 ng/L. Mortality to the exposed salmonids was not observed, and sublethal effects were not seen in vitellogenin or sex steroid levels. Indirect effects via toxicity to salmonid prey are possible. Mortality to Hyalella azteca, a potential prey, was observed in every event tested, and peak bifenthrin concentrations were comparable to the 96-h EC50 of the caddisfly, Hydropsyche sp., the most important prey species on a biomass basis for American River Chinook salmon. The other invertebrates tested had EC50s exceeding bifenthrin concentrations seen in the American River, though could potentially be at risk at concentrations previously reported in smaller urban tributaries. Environ Toxicol Chem 2015;34:649-657. © 2014 SETAC. PMID:25545717

  2. Imprinting Salmon and Steelhead Trout for Homing, 1983 Annual Report of Research.

    SciTech Connect

    Slatick, Emil

    1984-09-01

    The National Marine Fisheries Service (NMFS), under contract to the Bonneville Power Administration, began conducting research on imprinting Pacific salmon and steelhead for homing in 1978. In the juvenile marking phase, over 4 million juvenile salmon and steelhead were marked and released in 23 experiments. The primary objectives were to determine a triggering mechanism to activate the homing imprint, if a single imprint or a sequential imprint is necessary to assure homing, and the relationship between the physiological condition of fish and their ability to imprint. Ten experimental studies are discussed. Six of the studies employed a variety of techniques for imprinting fish. The remaining four tested the feasibility of imprinting fish by a short-distance voluntary migration before transport. In five experiments, survival was enhanced by the imprint-transportation procedures, and homing to the homing site area was partly successful. Returns from the Astoria, Oregon, release of fall chinook salmon from Big Creek Hatchery (Knappa, Oregon), for example, showed that limited short distance migration imprinting should provide 2-3 time more fish to the various fisheries while providing adequate returns to the hatchery for egg take each year. 21 refs., 12 figs, 12 tabs.

  3. Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at Bonneville Dam, Spring 2010

    SciTech Connect

    Ploskey, Gene R.; Faber, Derrek M.; Weiland, Mark A.; Carlson, Thomas J.

    2012-09-01

    The purpose of this study was to estimate the survival for yearling Chinook salmon and steelhead smolts during spring 2010 in a portion of the Columbia River that includes Bonneville Dam. The study estimated smolt survival from a virtual release at Bonneville Dam to a survival array 81 km downstream of Bonneville Dam. We also estimated median forebay residence time, median tailrace egress time, and spill passage efficiency (SPE), as required in the Columbia Basin Fish Accords. A single release design was used to estimate survival from Bonneville Dam to a primary array located 81 km downstream of Bonneville. The approach did not include a reference tailrace release. Releases of acoustic-tagged smolts above John Day Dam to Hood River contributed to the formation of virtual releases at a Bonneville Dam forebay entrance array and at the face of the dam. A total of 3,880 yearling Chinook salmon and 3,885 steelhead smolts were tagged and released in the investigation. The Juvenile Salmon Acoustic Telemetry System (JSATS) tag model number ATS-156dB, weighing 0.438 g in air, was used in this investigation.

  4. Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at Bonneville Dam, Spring 2010

    SciTech Connect

    Ploskey, Gene R.; Faber, Derrek M.; Weiland, Mark A.; Carlson, Thomas J.

    2011-02-01

    The purpose of this study was to estimate the survival for yearling Chinook salmon and steelhead smolts during spring 2010 in a portion of the Columbia River that includes Bonneville Dam. The study estimated smolt survival from a virtual release at Bonneville Dam to a survival array 81 km downstream of Bonneville Dam. We also estimated median forebay residence time, median tailrace egress time, and spill passage efficiency (SPE), as required in the Columbia Basin Fish Accords. A single release design was used to estimate survival from Bonneville Dam to a primary array located 81 km downstream of Bonneville. The approach did not include a reference tailrace release. Releases of acoustic-tagged smolts above John Day Dam to Hood River contributed to the formation of virtual releases at a Bonneville Dam forebay entrance array and at the face of the dam. A total of 3,880 yearling Chinook salmon and 3,885 steelhead smolts were tagged and released in the investigation. The Juvenile Salmon Acoustic Telemetry System (JSATS) tag model number ATS-156dB, weighing 0.438 g in air, was used in this investigation.

  5. Dynamics of the Oso-Steelhead landslide from broadband seismic analysis

    NASA Astrophysics Data System (ADS)

    Hibert, C.; Stark, C. P.; Ekström, G.

    2015-06-01

    We carry out a combined analysis of the short- and long-period seismic signals generated by the devastating Oso-Steelhead landslide that occurred on 22 March 2014. The seismic records show that the Oso-Steelhead landslide was not a single slope failure, but a succession of multiple failures distinguished by two major collapses that occurred approximately 3 min apart. The first generated long-period surface waves that were recorded at several proximal stations. We invert these long-period signals for the forces acting at the source, and obtain estimates of the first failure runout and kinematics, as well as its mass after calibration against the mass-centre displacement estimated from remote-sensing imagery. Short-period analysis of both events suggests that the source dynamics of the second event is more complex than the first. No distinct long-period surface waves were recorded for the second failure, which prevents inversion for its source parameters. However, by comparing the seismic energy of the short-period waves generated by both events we are able to estimate the volume of the second. Our analysis suggests that the volume of the second failure is about 15-30% of the total landslide volume, giving a total volume mobilized by the two events between 7 × 106 and 10 × 106 m3, in agreement with estimates from ground observations and lidar mapping.

  6. Using otolith chemical and structural analysis to investigate reservoir habitat use by juvenile Chinook salmon Oncorhynchus tshawytscha.

    PubMed

    Bourret, S L; Kennedy, B P; Caudill, C C; Chittaro, P M

    2014-11-01

    Isotopic composition of (87) Sr:(86) Sr and natural elemental tracers (Sr, Ba, Mg, Mn and Ca) were quantified from otoliths in juvenile and adult Chinook salmon Oncorhynchus tshawytscha to assess the ability of otolith microchemistry and microstructure to reconstruct juvenile O. tshawytscha rearing habitat and growth. Daily increments were measured to assess relative growth between natal rearing habitats. Otolith microchemistry was able to resolve juvenile habitat use between reservoir and natal tributary rearing habitats (within headwater basins), but not among catchments. Results suggest that 90% (n = 18) of sampled non-hatchery adults returning to the Middle Fork Willamette River were reared in a reservoir and 10% (n = 2) in natal tributary habitat upstream from the reservoir. Juveniles collected in reservoirs had higher growth rates than juveniles reared in natal streams. The results demonstrate the utility of otolith microchemistry and microstructure to distinguish among rearing habitats, including habitats in highly altered systems. PMID:25229130

  7. Imprinting Hatchery Reared Salmon and Steelhead Trout for Homing, Volume II of III; Data Summaries, 1978-1983 Final Report.

    SciTech Connect

    Slatick, Emil; Ringe, R.R.; Zaugg, Waldo S.

    1988-02-02

    The main functions of the National Marine Fisheries Service (NMFS) aquaculture task biologists and contractual scientists involved in the 1978 homing studies were primarily a surveillance of fish physiology, disease, and relative survival during culture in marine net-pens, to determine if there were any unusual factors that might affect imprinting and homing behavior. The studies were conducted with little background knowledge of the implications of disease and physiology on imprinting and homing in salmonids. The health status or the stocks were quite variable as could be expected. The Dworshak and Wells Hatcheries steelhead suffered from some early stresses in seawater, probably osmoregulatory. The incidences of latent BKD in the Wells and Chelan Hatcheries steelhead and Kooskia Hatchery spring chinook salmon were extremely high, and how these will affect survival in the ocean is not known. Gill enzyme activity in the Dworshak and Chelan Hatcheries steelhead at release was low. Of the steelhead, survival in the Tucannon Hatchery stock will probably be the highest, with Dworshak Hatchery stock the lowest. This report contains the data for the narratives in Volume I.

  8. Clinostomum marginatum in steelhead trout (Salmo gairdneri) and cutthroat trout (Salmo clarki) in a western Washington lake

    USGS Publications Warehouse

    Uzmann, J.R.; Douglas, J.

    1966-01-01

    Clinostomum marginatum (Trematoda: Clinostomatidae), the yellow grub parasite, was recorded in epizootic proportions from Lynch Lake, King County, Washington, in 1961 and 1962. The parasite larvae occurred principally in steelhead trout (Salmo gairdneri); cutthroat trout (S. clarki) were infected to a relatively minor degree. Fish and snail host populations were destroyed by rotenone and copper sulfate treatments.

  9. Imprinting Hatchery Reared Salmon and Steelhead Trout for Homing, Volume I of III; Narrative, 1978-1983 Final Report.

    SciTech Connect

    Slatick, Emil; Gilbreath, Lyle G.; Harmon, Jerrel R.

    1988-02-01

    The National Marine Fisheries Service began conducting homing research on Pacific salmon and steelhead. Over 4 million juvenile salmon and steelhead were marked and released, and 23 individual experiments were conducted. The research had the following objectives: (1) develop the techniques for imprinting homing cues while increasing survival of hatchery reared salmonids and (2) provide fishery managers with the information necessary to increase the returns of salmon and steelhead to the Columbia River system and to effectively distribute these fish to the various user groups. Our imprint methods were grouped into three general categories: (1) natural migration imprint from a hatchery of origin or an alternate homing site (by allowing fish to volitionally travel downstream through the river on their seaward journey), (2) single exposure imprinting (cueing fish to a single unique water supply with or without mechanical stimuli prior to transport and release), and (3) sequential exposure imprinting (cueing fish to two or more water sources in a step-by-step process to establish a series of signposts for the route ''home''). With variations, all three techniques were used with all salmonid groups tested: coho salmon, spring and fall chinook salmon, and steelhead. For the single and sequential imprint, fish were transported around a portion of their normal migration route before releasing them into the Columbia River.

  10. STRESS-INDUCED TRANSMISSON OF 'YERSINIA RUCKERI' INFECTION FROM CARRIERS TO RECIPIENT STEELHEAD TROUT 'SALMO GAIRDNERI' RICHARDSON

    EPA Science Inventory

    The transmission of Yersinia ruckeri has been investigated in steelhead trout using asymptomatic carriers of the causative bacterium of enteric redmouth disease. It was found that unstressed carrier fish did not transmit the bacterium to recipient fish to cause either an epizooti...

  11. Compliance Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at The Dalles Dam, Spring 2011

    SciTech Connect

    Skalski, John R.; Townsend, Richard L.; Seaburg, Adam; Johnson, Gary E.; Ploskey, Gene R.; Carlson, Thomas J.

    2012-06-12

    The study estimated dam passage survival at The Dalles Dam as stipulated by the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp) and provided additional performance measures as stipulated in the Columbia Basin Fish Accords. This summary report focuses on spring run stocks, yearling Chinook salmon and steelhead.

  12. Compliance Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at The Dales Dam, Spring 2011

    SciTech Connect

    Skalski, John R.; Townsend, Richard L.; Seaburg, Adam; Johnson, Gary E.; Ploskey, Gene R.; Carlson, Thomas J.

    2012-02-01

    The study estimated dam passage survival at The Dalles Dam as stipulated by the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp) and provided additional performance measures as stipulated in the Columbia Basin Fish Accords. This summary report focuses on spring run stocks, yearling Chinook salmon and steelhead.

  13. A Floating Bridge Disrupts Seaward Migration and Increases Mortality of Steelhead Smolts in Hood Canal, Washington State

    PubMed Central

    Moore, Megan; Berejikian, Barry A.; Tezak, Eugene P.

    2013-01-01

    Background Habitat modifications resulting from human transportation and power-generation infrastructure (e.g., roads, dams, bridges) can impede movement and alter natural migration patterns of aquatic animal populations, which may negatively affect survival and population viability. Full or partial barriers are especially problematic for migratory species whose life histories hinge on habitat connectivity. Methodology/Principal Findings The Hood Canal Bridge, a floating structure spanning the northern outlet of Hood Canal in Puget Sound, Washington, extends 3.6 meters underwater and forms a partial barrier for steelhead migrating from Hood Canal to the Pacific Ocean. We used acoustic telemetry to monitor migration behavior and mortality of steelhead smolts passing four receiver arrays and several single receivers within the Hood Canal, Puget Sound, and Strait of Juan de Fuca. Twenty-seven mortality events were detected within the vicinity of the Hood Canal Bridge, while only one mortality was recorded on the other 325 receivers deployed throughout the study area. Migrating steelhead smolts were detected at the Hood Canal Bridge array with greater frequency, on more receivers, and for longer durations than smolts migrating past three comparably configured arrays. Longer migration times and paths are likely to result in a higher density of smolts near the bridge in relation to other sites along the migration route, possibly inducing an aggregative predator response to steelhead smolts. Conclusions/Significance This study provides strong evidence of substantial migration interference and increased mortality risk associated with the Hood Canal Bridge, and may partially explain low early marine survival rates observed in Hood Canal steelhead populations. Understanding where habitat modifications indirectly increase predation pressures on threatened populations helps inform potential approaches to mitigation. PMID:24039937

  14. Population Structure of Columbia River Basin Chinook Salmon and Steelhead Trout, Technical Report 2001.

    SciTech Connect

    Brannon, E.L.; National Science Foundation

    2002-08-01

    The population structure of chinook salmon and steelhead trout is presented as an assimilation of the life history forms that have evolved in synchrony with diverse and complex environments over their Pacific range. As poikilotherms, temperature is described as the overwhelming environmental influence that determines what life history options occur and where they are distributed. The different populations represent ecological types referred to as spring-, summer-, fall, and winter-run segments, as well as stream- and ocean-type, or stream- and ocean-maturing life history forms. However, they are more correctly described as a continuum of forms that fall along a temporal cline related to incubation and rearing temperatures that determine spawn timing and juvenile residence patterns. Once new habitats are colonized, members of the founding populations spread through adaptive evolution to assume complementary life history strategies. The related population units are collectively referred to as a metapopulation, and members most closely associated within common temporal and geographic boundaries are designated as first-order metapopulations. Population structure of chinook salmon and steelhead in the Columbia Basin, therefore, is the reflection of the genetic composition of the founding source or sources within the respective region, shaped by the environment, principally temperature, that defines life history evolutionary strategy to maximize fitness under the conditions delineated. The complexity of structure rests with the diversity of opportunities over the elevations that exist within the Basin. Consistent with natural selection, rather than simply attempting to preserve populations, the challenge is to provide opportunities to expand their range to new or restored habitat that can accommodate genetic adaptation as directional environmental changes are elaborated. Artificial propagation can have a critical role in this process, and the emphasis must be placed on

  15. Genetic Monitoring and Evaluation Program for Supplemented Populations of Salmon and Steelhead in the Snake River Basin, 1990-1991 Annual Report.

    SciTech Connect

    Waples, Robin S.; Teel, David J.; Aebersold, Paul B.

    1991-08-01

    This is the first report of research for an ongoing study to evaluate the genetic effects of using hatchery-reared fish to supplement natural populations of chinook salmon and steelhead in the Snake River Basin.

  16. Relationships Between Landscape Habitat Characteristics and Relative Density Categories of Steelhead Trout and Chinook Salmon Parr in Idaho, 1999 Annual Report.

    SciTech Connect

    Thompson, William L.; Lee, Danny C.

    1999-09-01

    This paper is an investigation into possible relationships between landscape habitat characteristics and density categories of steelhead and spring/summer chinook parr within index streams in the Snake River drainage in Idaho.

  17. Tolerance to gas supersaturation in freshwater and seawater by steelhead trout (Salmo gairdneri)

    USGS Publications Warehouse

    Bouck, G.R.; King, R.E.

    1983-01-01

    The euryhaline status of steelhead trout, Salmo gairdneri, smolts was challenged in sea water for 2 weeks after which half of the total fish population was returned to fresh water. Acclimation continued and created two test populations in 29%osea water and fresh water. Subsequently these fish were exposed in fresh water or sea water to approximately equal hyperbaric dissolved total gas pressures (ΔP) of 190 mm Hg or about 125% of barometric pressure. Sea water was easier to supersaturate with air and required only about 10% of the entrained air which was required in fresh water at the same temperature and pressure. Mean time to first mortality was sooner in sea water. Mean times to mortality (10–50%) were not significantly different between fresh water and sea water, but there was a noticeable trend for longer survival in fresh water.

  18. Genetic differences in growth and survival of juvenile hatchery and wild steelhead trout, Salmo gairdneri

    USGS Publications Warehouse

    Reisenbichler, R.R.; McIntyre, J.D.

    1997-01-01

    Relative growth and survival of offspring from matings of hatchery and wild Deschutes River (Oregon) summer steelhead trout, Salmo gairdneri, were measured to determine if hatchery fish differ genetically from wild fish in traits that can affect the stock–recruitment relationship of wild populations. Sections of four natural streams and a hatchery pond were each stocked with genetically marked (lactate dehydrogenase genotypes) eyed eggs or unfed swim-up fry from each of three matings: hatchery × hatchery (HH), hatchery × wild (HW), and wild × wild (WW). In streams, WW fish had the highest survival and HW fish the highest growth rates when significant differences were found; in the hatchery pond, HH fish had the highest survival and growth rates. The hatchery fish were genetically different from wild fish and when they interbreed with wild fish may reduce the number of smolts produced. Hatchery procedures can be modified to reduce the genetic differences between hatchery and wild fish.

  19. Genetic variation in steelhead (Salmo gairdneri) from the north coast of Washington

    USGS Publications Warehouse

    Reisenbichler, R.R.; Phelps, S.R.

    1989-01-01

    Steelhead (Salmo gairdneri) collected from various sites in nine drainages in northwestern Washington were genetically characterized at 65 protein-coding loci by starch-gel electrophoresis. Genetic differentiation within and among drainages was not significant, and genetic variation among drainages was much less than that reported in British Columbia; these results may be the consequence of gene flow from hatchery stocks that have been released in Washington since the 1940's. Allele frequencies varied significantly among year-classes (hence, genetic characterization studies must include data from several year-classes), and also between hatchery fish (including a stock developed with local wild fish) and wild fish, indicating that few wild fish have been successfully and routinely included in hatchery brood stocks. Conservation of genetic diversity along the north coast of Washington should be facilitated by reducing the numbers of hatchery fish that spawn in streams and by including wild fish in hatchery brood stocks.

  20. Hydroacoustic Monitoring of Downstream Migrant Salmon and Steelhead at Wells Dam in Spring 1984.

    SciTech Connect

    Raemhild, Gary A.

    1984-10-31

    The downstream migration of salmon and steelhead in spring 1984 at Wells Dam on the mid-Columbia River was monitored using hydroacoustics. The primary objective of this research was to document run timing and describe the distribution of smolts at the dam. The study occurred from April 2 to June 15, 1984. Four transducers were deployed at the bases of pier noses at Turbines 3, 5, 7, and 9 and aimed up 24/sup 0/ into the forebay. They were sampled once every hour, 24 hours per day, for 75 days. An index of fish passage was reported daily to the Water Budget Center in Portland, Oregon. This index was computed as follows. For each 24-h period, separate fish passage rates (number/time) at each of the four sampling locations were estimated by dividing the sum of the ''weighted'' fish detections by total sample time. These four values then were averaged to produced the daily index (number/day/location). The first substantial increase in fish passage occurred on April 25, 1984 due to the chinook released from the Winthrop hatchery on April 23. During May, run timing was fairly uniform except for peaks on May 2, 14, 18, and 22. The unexpected peak in run size that occurred from May 29 to June 2 could have been caused by juvenile mountain whitefish. Although the proportion of each species varied, chinook passage probably peaked in late April, and steelhead in the first two weeks of May; sockeye passage was variable throughout the study. The data indicated that most downstream migrants were distributed high in the water column and toward the western end of the dam. Average hourly passage rates for day and night were similar, but more fish passed the dam during the longer period of daylight than the shorter period of darkness. 7 refs., 13 figs.

  1. Prevention and treatment of Nitrite toxicity in juvenile steelhead trout (Salmo gairdneri)

    USGS Publications Warehouse

    Wedemeyer, Gary A.; Yasutake, W.T.

    1978-01-01

    The efficacy of mineral salts, pH, and tetramethylthianine (methylene blue) treatment in reducing the acute toxicity of nitrite to fingerling steelhead trout (Salmo gairdneri) was determined using a static bioassay system at 10 °C. The acute toxicity (96-h LC50) was reduced by a factor of about 24 for 5-g steelhead and 13 for 10-g fish when the total water hardness was increased from 25 to 300 mg/L (as CaCO3). NaCl or CaCl2 additions (0–200 mg/L) reduced toxicity by a factor of up to 3 for NaCl and 50 for CaCl2. Increasing the pH from 6.0 to 8.0 decreased toxicity by a factor of about 8 for the smaller and 3 for the larger fish. Methylene blue at 0.1 or 1.0 mg/L was effective in decreasing acute toxicity. For alleviating methemoglobinemia, removing the fish to freshwater for 48 h was about as effective as 1.0 mg/L methylene blue. Chronic exposure in soft water to 0.03 mg/L NO2-N for 6 mo caused no significant growth reduction, gill histological changes, hematological dyscrasias, or impaired ability of the smolts to adapt to 30‰ seawater and grow for an additional 2 mo. Key words: nitrite, toxicity, fish, methylene blue, pH, salts, acute toxicity, chronic toxicity

  2. The Effects of Disease-Induced Juvenile Mortality on the Transient and Asymptotic Population Dynamics of Chinook Salmon (Oncorhynchus tshawytscha)

    PubMed Central

    Fujiwara, Masami; Mohr, Michael S.; Greenberg, Aaron

    2014-01-01

    The effects of an increased disease mortality rate on the transient and asymptotic dynamics of Chinook salmon (Oncorhynchus tshawytscha) were investigated. Disease-induced mortality of juvenile salmon has become a serious concern in recent years. However, the overall effects of disease mortality on the asymptotic and transient dynamics of adult spawning abundance are still largely unknown. We explored various scenarios with regard to the density-dependent process, the distribution of survivorship over the juvenile phase, the disease mortality rate, and the infusion of stray hatchery fish. Our results suggest that the sensitivity to the disease mortality rate of the equilibrium adult spawning abundance and resilience (asymptotic return rate toward this equilibrium following a small perturbation) varied widely and differently depending on the scenario. The resilience and coefficient of variation of adult spawning abundance following a large perturbation were consistent with each other under the scenarios investigated. We conclude that the increase in disease mortality likely has an effect on fishery yield under a fluctuating environment, not only because the mean equilibrium adult spawning abundance has likely been reduced, but also because the resilience has likely decreased and the variance in adult spawning abundance has likely increased. We also infer the importance of incorporating finer-scale spatiotemporal information into population models and demonstrate a means for doing so within a matrix population modeling framework. PMID:24427310

  3. Emigration of Natural and Hatchery Chinook Salmon and Steelhead Smolts from the Imnaha River, Oregon, Progress Report 2000-2002.

    SciTech Connect

    Cleary, Peter; Kucera, Paul; Blenden, Michael

    2003-12-01

    This report summarizes the emigration studies of the Nez Perce Tribe in the Imnaha River subbasin during the 2001 and 2002 migration years. A migration year for the Imnaha River is defined here as beginning July 31 of the previous year and ending July 30 the following year. The conclusion of the studies at the end of migration year 2002 marked the 11th year of the Nez Perce Tribe's Lower Snake River Emigration Studies. The Nez Perce Tribe has participated in the Fish Passage Center's Smolt Monitoring Program for nine of the 11 years. These studies collect and tag juvenile chinook salmon and steelhead at two locations in the fall, rkm 74 and rkm 7, and at rkm 7 during the spring. Data from captured and tagged fish provide an evaluation of hatchery production and releases strategies, post release survival of hatchery chinook salmon, abundance of natural chinook salmon, and downstream survival and arrival timing of natural and hatchery chinook salmon and steelhead. The hydrologic conditions that migrating fish encountered in 2001 were characterized as a drought and conditions in 2002 were characterized as below average. Hatchery chinook salmon had a mean fork length that was 34 mm greater in 2001 and 35 mm greater in 2002 than the mean fork length of natural chinook smolts. Hatchery steelhead smolt mean fork lengths were 39 mm greater than natural steelhead smolts in 2001 and 44 mm greater than natural steelhead smolt fork lengths in 2002. A significant difference (p < 0.05) between hatchery and natural chinook salmon and steelhead fork lengths has been documented by these emigration studies from 1997 to 2002. Hatchery chinook salmon were volitionally released in 2001 and 2002 and the 90% arrivals for 2001 and 2002 at the lower rkm 7 trap were within the range of past observations of 22 to 38 days observed in 1999 and 2000. We estimated that 93.9% of the 123,014 hatchery chinook salmon released in 2001 survived to the lower trap and 90.2% of the 303,769 hatchery

  4. Potential factors affecting survival differ by run-timing and location: linear mixed-effects models of Pacific salmonids (Oncorhynchus spp.) in the Klamath River, California.

    PubMed

    Quiñones, Rebecca M; Holyoak, Marcel; Johnson, Michael L; Moyle, Peter B

    2014-01-01

    Understanding factors influencing survival of Pacific salmonids (Oncorhynchus spp.) is essential to species conservation, because drivers of mortality can vary over multiple spatial and temporal scales. Although recent studies have evaluated the effects of climate, habitat quality, or resource management (e.g., hatchery operations) on salmonid recruitment and survival, a failure to look at multiple factors simultaneously leaves open questions about the relative importance of different factors. We analyzed the relationship between ten factors and survival (1980-2007) of four populations of salmonids with distinct life histories from two adjacent watersheds (Salmon and Scott rivers) in the Klamath River basin, California. The factors were ocean abundance, ocean harvest, hatchery releases, hatchery returns, Pacific Decadal Oscillation, North Pacific Gyre Oscillation, El Niño Southern Oscillation, snow depth, flow, and watershed disturbance. Permutation tests and linear mixed-effects models tested effects of factors on survival of each taxon. Potential factors affecting survival differed among taxa and between locations. Fall Chinook salmon O. tshawytscha survival trends appeared to be driven partially or entirely by hatchery practices. Trends in three taxa (Salmon River spring Chinook salmon, Scott River fall Chinook salmon; Salmon River summer steelhead trout O. mykiss) were also likely driven by factors subject to climatic forcing (ocean abundance, summer flow). Our findings underscore the importance of multiple factors in simultaneously driving population trends in widespread species such as anadromous salmonids. They also show that the suite of factors may differ among different taxa in the same location as well as among populations of the same taxa in different watersheds. In the Klamath basin, hatchery practices need to be reevaluated to protect wild salmonids. PMID:24866173

  5. Potential Factors Affecting Survival Differ by Run-Timing and Location: Linear Mixed-Effects Models of Pacific Salmonids (Oncorhynchus spp.) in the Klamath River, California

    PubMed Central

    Quiñones, Rebecca M.; Holyoak, Marcel; Johnson, Michael L.; Moyle, Peter B.

    2014-01-01

    Understanding factors influencing survival of Pacific salmonids (Oncorhynchus spp.) is essential to species conservation, because drivers of mortality can vary over multiple spatial and temporal scales. Although recent studies have evaluated the effects of climate, habitat quality, or resource management (e.g., hatchery operations) on salmonid recruitment and survival, a failure to look at multiple factors simultaneously leaves open questions about the relative importance of different factors. We analyzed the relationship between ten factors and survival (1980–2007) of four populations of salmonids with distinct life histories from two adjacent watersheds (Salmon and Scott rivers) in the Klamath River basin, California. The factors were ocean abundance, ocean harvest, hatchery releases, hatchery returns, Pacific Decadal Oscillation, North Pacific Gyre Oscillation, El Niño Southern Oscillation, snow depth, flow, and watershed disturbance. Permutation tests and linear mixed-effects models tested effects of factors on survival of each taxon. Potential factors affecting survival differed among taxa and between locations. Fall Chinook salmon O. tshawytscha survival trends appeared to be driven partially or entirely by hatchery practices. Trends in three taxa (Salmon River spring Chinook salmon, Scott River fall Chinook salmon; Salmon River summer steelhead trout O. mykiss) were also likely driven by factors subject to climatic forcing (ocean abundance, summer flow). Our findings underscore the importance of multiple factors in simultaneously driving population trends in widespread species such as anadromous salmonids. They also show that the suite of factors may differ among different taxa in the same location as well as among populations of the same taxa in different watersheds. In the Klamath basin, hatchery practices need to be reevaluated to protect wild salmonids. PMID:24866173

  6. Chum salmon Oncorhynchus keta respond to moonlight during homeward migrations.

    PubMed

    Hasegawa, E I

    2012-07-01

    The swimming depth of chum salmon Oncorhynchus keta equipped with archival tags was investigated off the Pacific Ocean coast of Hokkaido and North Honshu, Japan. As shown from movements of the fish with disc tags, O. keta swam at shallower depths during the full-moon phase than in the other phases and their swimming speed during this phase was faster compared to other phases. In addition, the circadian rhythm suggests a biological clock. These observations are all consistent with the view that O. keta make use of moonlight in order to navigate at night-time during homeward migration. PMID:22803727

  7. Inhibition of salt water survival and Na-K-ATPase elevation in steelhead trout (Salmo gairdneri) by moderate water temperatures

    USGS Publications Warehouse

    Adams, B. L.; Zaugg, W.S.; McLain, L. R.

    1975-01-01

    The steelhead trout metamorphosis from a freshwater parr to a sea water-tolerant smolt possessing the migration tendency was evaluated at six different growth temperatures ranging from 6 to 15 C during January through July. The highest temperature where a transformation was indicated was 11.3 C. By April fish reared at 6 C had elevated ATPase levels typical of smolts or migratory animals and showed 92% survival in sea water. Ten and 11.3 C-reared fish showed a short-lived elevation in ATPase in mid-April alone concurrently with 100% sea water survival at that time. Only in 6 C-reared animals did the salt water survival ability continue into May. High ATPase levels likewise were prolonged into May and June only in the 6 C-reared group. The data indicate that metamorphosis (and therefore successful migration) of juvenile steelhead trout is directly controlled by water temperature.

  8. Genetic differences in growth, migration, and survival between hatchery and wild steelhead and Chinook salmon: Introduction and executive summary

    USGS Publications Warehouse

    2012-01-01

    This report presents results of studies testing for genetically based differences in performance (growth, migration, and survival) between hatchery and wild populations of steelhead and Chinook salmon (Project Number 90-052). The report is organized into 10 chapters with a general study introduction preceding the first chapter. A growing body of data shows that domestication and a resulting loss of fitness for natural rearing occur in hatchery populations of anadromous salmonids; however, the magnitude of domestication will vary among species and hatchery programs. Better information on domestication is needed to accurately predict the consequences when hatchery and wild fish interbreed. The intent of hatchery supplementation is to increase natural production through introduction of hatchery fish into natural production areas. The goal of this study was to provide managers with information on the genetic risks of hatchery supplementation to wild populations of Columbia River Basin summer steelhead and spring Chinook salmon.

  9. Factors affecting route selection and survival of steelhead kelts at Snake River dams in 2012 and 2013

    SciTech Connect

    Harnish, Ryan A.; Colotelo, Alison H. A.; Li, Xinya; Fu, Tao; Ham, Kenneth D.; Deng, Zhiqun; Green, Ethan D.

    2015-03-31

    In 2012 and 2013, Pacific Northwest National Laboratory (PNNL) conducted a study that summarized the passage route proportions and route-specific survival rates of steelhead kelts that passed through Federal Columbia River Power System (FCRPS) dams. To accomplish this, a total of 811 steelhead kelts were tagged with Juvenile Salmon Acoustic Telemetry System (JSATS) transmitters. Acoustic receivers, both autonomous and cabled, were deployed throughout the FCRPS to monitor the downstream movements of tagged kelts. Kelts were also tagged with passive integrated transponder tags to monitor passage through juvenile bypass systems (JBS) and detect returning fish. The current study evaluated data collected in 2012 and 2013 to identify environmental, temporal, operational, individual, and behavioral variables that were related to forebay residence time, route of passage, and survival of steelhead kelts at FCRPS dams on the Snake River. Multiple approaches, including 3-D tracking, bivariate and multivariable regression modeling, and decision tree analyses were used to identify the environmental, temporal, operational, individual, and behavioral variables that had the greatest effect on forebay residence time, route of passage, and route-specific and overall dam passage survival probabilities for tagged kelts at Lower Granite (LGR), Little Goose (LGS), and Lower Monumental (LMN) dams. In general, kelt behavior and discharge appeared to work independently to affect forebay residence times. Kelt behavior, primarily approach location, migration depth, and “searching” activities in the forebay, was found to have the greatest influence on their route of passage. The condition of kelts was the single most important factor affecting their survival. The information gathered in this study may be used by dam operators and fisheries managers to identify potential management actions to improve in-river survival of kelts or collection methods for kelt reconditioning programs to aid

  10. Survival and Passage of Yearling and Subyearling Chinook Salmon and Juvenile Steelhead at McNary Dam, 2012

    SciTech Connect

    Hughes, James S.; Weiland, Mark A.; Woodley, Christa M.; Ploskey, Gene R.; Carpenter, Scott M.; Hennen, Matthew J.; Fischer, Eric S.; Batton, George; Carlson, Thomas J.; Cushing, Aaron W.; Deng, Zhiqun; Etherington, D. J.; Fu, Tao; Greiner, Michael J.; Ingraham, John M.; Kim, Jin A.; Li, Xi; Martinez, Jayson J.; Mitchell, T. D.; Rayamajhi, Bishes; Seaburg, Adam; Skalski, J. R.; Townsend, Richard L.; Wagner, Katie A.; Zimmerman, Shon A.

    2013-12-23

    The study was designed to evaluate the passage and survival of yearling and subyearling Chinook salmon and juvenile steelhead at McNary Dam as stipulated by the 2008 Biological Opinion and Fish Accords and to assess performance measures including route-specific fish passage proportions, travel times, and survival based upon a virtual/paired-release model. This study supports the USACE’s continual effort to improve conditions for juvenile anadromous fish passing through Columbia River dams.

  11. Compliance Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at The Dalles Dam, Spring 2010

    SciTech Connect

    Carlson, Thomas J.; Skalski, John R.

    2010-10-01

    The purpose of this compliance study was to estimate dam passage survival of yearling Chinook salmon and steelhead smolts at The Dalles Dam during spring 2010. Under the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp), dam passage survival should be greater than or equal to 0.96 and estimated with a standard error (SE) less than or equal 0.015. The study also estimated smolt passage survival from the forebay boat-restricted zone (BRZ) to the tailrace BRZ at The Dalles Dam, as well as the forebay residence time, tailrace egress, and spill passage efficiency (SPE), as required in the Columbia Basin Fish Accords. A virtual/paired-release design was used to estimate dam passage survival at The Dalles Dam. The approach included releases of acoustic-tagged smolts above John Day Dam that contributed to the formation of a virtual release at the face of The Dalles Dam. A survival estimate from this release was adjusted by a paired release below The Dalles Dam. A total of 4,298 yearling Chinook salmon and 4,309 steelhead smolts were tagged and released in the investigation. The Juvenile Salmon Acoustic Telemetry System (JSATS) tag model number ATS-156dB, weighing 0.438 g in air, was used in this investigation. The dam passage survival results are summarized as follows: Yearling Chinook Salmon 0.9641 (SE = 0.0096) and Steelhead 0.9535 (SE = 0.0097).

  12. Quantification of ventricular β2 -adrenoceptor density and ligand binding affinity in wild sockeye salmon Oncorhynchus nerka smolts using a novel modification to the tritiated ligand technique.

    PubMed

    Goulding, A T; Farrell, A P

    2016-05-01

    A new, image-based, tritiated ligand technique for measuring cardiac β2 -adrenoceptor (β2 -AR) binding characteristics was developed and validated with adult rainbow trout Oncorhynchus mykiss hearts so that the tissue limitation of traditional receptor binding techniques could be overcome and measurements could be made in hearts nearly 14-times smaller than previously used. The myocardial cell-surface (functional) β2 -AR density of O. nerka smolts sampled at the headwaters of the Chilko River was 54·2 fmol mg protein(-1) and about half of that previously found in return migrating adults of the same population, but still more than twice that of adult hatchery O. mykiss (21·1 fmol mg protein(-1) ). This technique now opens the possibility of investigating cardiac receptor density in a much wider range of fish species and life stages. PMID:27095288

  13. Provenance matters: thermal reaction norms for embryo survival among sockeye salmon Oncorhynchus nerka populations.

    PubMed

    Whitney, C K; Hinch, S G; Patterson, D A

    2013-04-01

    Differences in thermal tolerance during embryonic development in Fraser River sockeye salmon Oncorhynchus nerka were examined among nine populations in a controlled common-garden incubation experiment. Forcing embryonic development at an extreme temperature (relative to current values) of 16° C, representing a future climate change scenario, significantly reduced survival compared to the more ecologically moderate temperature of 10° C (55% v. 93%). Survival at 14° C was intermediate between the other two temperatures (85%). More importantly, this survival response varied by provenance within and between temperature treatments. Thermal reaction norms showed an interacting response of genotype and environment (temperature), suggesting that populations of O. nerka may have adapted differentially to elevated temperatures during incubation and early development. Moreover, populations that historically experience warmer incubation temperatures at early development displayed a higher tolerance for warm temperatures. In contrast, thermal tolerance does not appear to transcend life stages as adult migration temperatures were not related to embryo thermal tolerance. The intra-population variation implies potential for thermal tolerance at the species level. The differential inter-population variation in thermal tolerance that was observed suggests, however, limited adaptive potential to thermal shifts for some populations. This infers that the intergenerational effects of increasing water temperatures may affect populations differentially, and that such thermally mediated adaptive selection may drive population, and therefore species, persistence. PMID:23557297

  14. Adaptive genetic markers discriminate migratory runs of Chinook salmon (Oncorhynchus tshawytscha) amid continued gene flow.

    PubMed

    O'Malley, Kathleen G; Jacobson, Dave P; Kurth, Ryon; Dill, Allen J; Banks, Michael A

    2013-12-01

    Neutral genetic markers are routinely used to define distinct units within species that warrant discrete management. Human-induced changes to gene flow however may reduce the power of such an approach. We tested the efficiency of adaptive versus neutral genetic markers in differentiating temporally divergent migratory runs of Chinook salmon (Oncorhynchus tshawytscha) amid high gene flow owing to artificial propagation and habitat alteration. We compared seven putative migration timing genes to ten microsatellite loci in delineating three migratory groups of Chinook in the Feather River, CA: offspring of fall-run hatchery broodstock that returned as adults to freshwater in fall (fall run), spring-run offspring that returned in spring (spring run), and fall-run offspring that returned in spring (FRS). We found evidence for significant differentiation between the fall and federally listed threatened spring groups based on divergence at three circadian clock genes (OtsClock1b, OmyFbxw11, and Omy1009UW), but not neutral markers. We thus demonstrate the importance of genetic marker choice in resolving complex life history types. These findings directly impact conservation management strategies and add to previous evidence from Pacific and Atlantic salmon indicating that circadian clock genes influence migration timing. PMID:24478800

  15. Estimating westslope cutthroat trout (Oncorhynchus clarkii lewisi) movements in a river network using strontium isoscapes

    USGS Publications Warehouse

    Muhlfeld, Clint C.; Simon R. Thorrold; Thomas E. McMahon; Marotz, Brian

    2012-01-01

    We used natural variation in the strontium concentration (Sr:Ca) and isotope composition (87Sr:86Sr) of stream waters and corresponding values recorded in otoliths of westslope cutthroat trout (Oncorhynchus clarkii lewisi) to examine movements during their life history in a large river network. We found significant spatial differences in Sr:Ca and 87Sr:86Sr values (strontium isoscapes) within and among numerous spawning and rearing streams that remained relatively constant seasonally. Both Sr:Ca and 87Sr:86Sr values in the otoliths of juveniles collected from nine natal streams were highly correlated with those values in the ambient water. Strontium isoscapes measured along the axis of otolith growth revealed that almost half of the juveniles had moved at least some distance from their natal streams. Finally, otolith Sr profiles from three spawning adults confirmed homing to natal streams and use of nonoverlapping habitats over their migratory lifetimes. Our study demonstrates that otolith geochemistry records movements of cutthroat trout through Sr isoscapes and therefore provides a method that complements and extends the utility of conventional tagging techniques in understanding life history strategies and conservation needs of freshwater fishes in river networks.

  16. Metabolism and elimination of benzocaine by rainbow-trout, Oncorhynchus mykiss

    USGS Publications Warehouse

    Meinertz, J.R.; Gingerich, W.H.; Allen, J.L.

    1991-01-01

    1. Branchial and urinary elimination of benzocaine residues was evaluated in adult rainbow trout, oncorhynchus mykiss, given a single dorsal aortic dose of c-14-benzocaine hydrochloride.^2. Branchial elimination of benzocaine residues was rapid and accounted for 59.2% Of the dose during the first 3 h after dosing. Renal elimination of radioactivity was considerably slower; the kidney excreted 2.7% Dose within 3 h and 9.0% Within 24 h. Gallbladder bile contained 2.0% Dose 24 h after injection.^3. Of the radioactivity in radiochromatograms from water taken 3 min after injection, 87.3% Was benzocaine and 12.7% Was n-acetylated benzocaine. After 60 min, 32.7% Was benzocaine and 67.3% Was n-acetylated benzocaine.^4. Of the radioactivity in radiochromatograms from urine taken 1 h after dosing, 7.6% Was para-aminobenzoic acid, 59.7% Was n-acetylated para-aminobenzoic acid, 19.5% Was benzocaine, and 8.0% Was n-acetylated benzocaine. The proportion of the radioactivity in urine changed with time so that by 20 h, 1.0% Was para-aminobenzoic acid and 96.6% Was n-acetylated para-aminobenzoic acid.^5. Benzocaine and a more hydrophobic metabolite, n-acetylated benzocaine, were eliminated primarily through the gills; renal and biliary pathways were less significant elimination routes for benzocaine residues.

  17. Characterization and application of a quantitative DNA marker that discriminates sex in Chinook salmon (Oncorhynchus tshawytscha)

    USGS Publications Warehouse

    Clifton, D.R.; Rodriguez, R.J.

    1997-01-01

    A qualitative male-specific DNA marker (OT-24) was amplified by spPCR (single-primer polymerase chain reaction) from chinook salmon (Oncorhynchus tshawytscha) DNA along with several non-sex-linked products. The termini of the male-specific product were sequenced, and a pair of PeR primers were constructed for marker-specific PCR amplification. Dual primer PCR (dpPCR), with the marker-specific primers, amplified a product from both nudes and females. The amount of dpPCR product amplified from males was at least 100-fold greater than that from females. The quantitative difference between males and females was consistent among geographically distinct populations from western U.S. rivers. In addition, DNA sequence analysis indicated that OT-24 was highly conserved among geographically distinct salmon populations. The qualitative spPCR product segregated through several genetic crosses indicating equal sex ratios among progeny. Identification of the male and female juveniles by dpPCR was consistent with the spPCR analysis. There was no tissue specificity observed by spPCR or dpPCR analysis of this marker. A rapid DNA extraction method and dpPCR analysis were used to nonlethally determine sex ratios in wild spring chinook salmon adults, withheld for genetic and behavioral studies, prior to their development of gross sexual differences in their external morphology.

  18. Characterization and application of a quantitative DNA marker that discriminates sex in chinook salmon (Oncorhynchus tshawytscha)

    USGS Publications Warehouse

    Clifton, D.R.; Rodriguez, R.J.

    1997-01-01

    A qualitative male-specific DNA marker (OT-24) was amplified by spPCR (single-primer polymerase chain reaction) from chinook salmon (Oncorhynchus tshawytscha) DNA along with several non-sex-linked products. The termini of the male-specific product were sequenced, and a pair of PeR primers were constructed for marker-specific PCR amplification. Dual primer PCR (dpPCR), with the marker-specific primers, amplified a product from both nudes and females. The amount of dpPCR product amplified from males was at least 100-fold greater than that from females. The quantitative difference between males and females was consistent among geographically distinct populations from western U.S. rivers. In addition, DNA sequence analysis indicated that OT-24 was highly conserved among geographically distinct salmon populations. The qualitative spPCR product segregated through several genetic crosses indicating equal sex ratios among progeny. Identification of the male and female juveniles by dpPCR was consistent with the spPCR analysis. There was no tissue specificity observed by spPCR or dpPCR analysis of this marker. A rapid DNA extraction method and dpPCR analysis were used to nonlethally determine sex ratios in wild spring chinook salmon adults, withheld for genetic and behavioral studies, prior to their development of gross sexual differences in their external morphology.

  19. Monitoring and Evaluation of Smolt Migration in the Columbia Basin : Volume XVI : Survival and Transportation Effects for Migrating Snake River Hatchery Chinook Salmon and Steelhead: Historical Estimates from 1996-2003.

    SciTech Connect

    Buchanan, Rebecca A.; Skalski, John R.

    2007-12-07

    In 2005, the University of Washington developed a new statistical model to analyze the combined juvenile and adult detection histories of PIT-tagged salmon migrating through the Federal Columbia River Power System (FCRPS). This model, implemented by software Program ROSTER (River-Ocean Survival and Transportation Effects Routine), has been used to estimate survival and transportation effects on large temporal and spatial scales for PIT-tagged hatchery spring and summer Chinook salmon and steelhead released in the Snake River Basin from 1996 to 2003. Those results are reported here. Annual estimates of the smolt-to-adult return ratio (SAR), juvenile inriver survival from Lower Granite to Bonneville, the ocean return probability from Bonneville to Bonneville, and adult upriver survival from Bonneville to Lower Granite are reported. Annual estimates of transport-inriver (T/I) ratios and differential post-Bonneville mortality (D) are reported on both a systemwide basis, incorporating all transport dams analyzed, and a dam-specific basis. Transportation effects are estimated only for dams where at least 5,000 tagged smolts were transported from a given upstream release group. Because few tagged hatchery steelhead were transported in these years, no transportation effects are estimated for steelhead. Performance measures include age-1-ocean adult returns for steelhead, but not for Chinook salmon. Annual estimates of SAR from Lower Granite back to Lower Granite averaged 0.71% with a standard error (SE) of 0.18% for spring Chinook salmon from the Snake River Basin for tagged groups released from 1996 through 2003, omitting age-1-ocean (jack) returns. For summer Chinook salmon from the Snake River Basin, the estimates of annual SAR averaged 1.15% (SE=0.31%). Only for the release years 1999 and 2000 did the Chinook SAR approach the target value of 2%, identified by the NPCC as the minimum SAR necessary for recovery. Annual estimates of SAR for hatchery steelhead from the

  20. Viability criteria for steelhead of the south-central and southern California coast

    USGS Publications Warehouse

    Boughton, David A.; Adams, Peter B.; Anderson, Eric; Fusaro, Craig; Keller, Edward A.; Kelley, Elsie; Lentsch, Leo; Nielsen, Jennifer L.; Perry, Katie; Regan, Helen; Smith, Jerry; Swift, Camm C.; Thompson, Lisa; Watson, Fred

    2007-01-01

    Recovery planning for threatened and endangered steelhead requires measurable, objective criteria for determining an acceptably low risk of extinction. Here we propose viability criteria for two levels of biological organization: individual populations, and groups of populations within the SouthCentral/Southern California Coast Steelhead Recovery Planning Domain. For populations, we adapt criteria commonly used by the IUCN (The World Conservation Union) for identifying at-risk species. For groups of populations we implement a diversity-based “representation and redundancy rule,” in which diversity includes both life-history diversity and biogeographic groupings of populations. The resulting criteria have the potential for straightforward assessment of the risks posed by evolutionary, demographic, environmental, and catastrophic factors; and are designed to use data that are readily collected. However, our prescriptive approach led to one criterion whose threshold could not yet be specified due to inadequate data, and others in which the simplicity of the criteria may render them inefficient for populations with stable run sizes or stable life-history polymorphisms. Both of these problems could likely be solved by directed programs of research and monitoring aimed at developing more efficient (but equally risk-averse) “performance-based criteria.” Of particular utility would be data on the natural fluctuations of populations, research into the stabilizing influence of life-history polymorphisms, and research on the implications of drought, wildfires, and fluvial sediment regimes. Research on estuarine habitat could also yield useful information on the generality and reliability of its role as nursery habitat. Currently, risk assessment at the population level is not possible due to data deficiency, highlighting the need to implement a comprehensive effort to monitor run sizes, anadromous fractions, spawner densities and perhaps marine survival. Assessment at

  1. Rainbow trout (Oncorhynchus mykiss) invasion and the spread of hybridization with native westslope cutthroat trout (Oncorhynchus clarkii lewisi)

    USGS Publications Warehouse

    Boyer, M.C.; Muhlfeld, C.C.; Allendorf, F.W.

    2008-01-01

    We analyzed 13 microsatellite loci to estimate gene flow among westslope cutthroat trout, Oncorhynchus clarkii lewisi, populations and determine the invasion pattern of hybrids between native O. c. lewisi and introduced rainbow trout, Oncorhynchus mykiss, in streams of the upper Flathead River system, Montana (USA) and British Columbia (Canada). Fourteen of 31 sites lacked evidence of O. mykiss introgression, and gene flow among these nonhybridized O. c. lewisi populations was low, as indicated by significant allele frequency divergence among populations (?ST = 0.076, ?ST = 0.094, P < 0.001). Among hybridized sites, O. mykiss admixture declined with upstream distance from a site containing a hybrid swarm with a predominant (92%) O. mykiss genetic contribution. The spatial distribution of hybrid genotypes at seven diagnostic microsatellite loci revealed that O. mykiss invasion is facilitated by both long distance dispersal from this hybrid swarm and stepping-stone dispersal between hybridized populations. This study provides an example of how increased straying rates in the invasive taxon can contribute to the spread of extinction by hybridization and suggests that eradicating sources of introgression may be a useful conservation strategy for protecting species threatened with genomic extinction. ?? 2008 NRC.

  2. Spread of hybridization between native westslope cutthroat trout, Oncorhynchus clarki lewisi, and nonnative rainbow trout, Oncorhynchus mykiss

    USGS Publications Warehouse

    Hitt, Nathaniel P.; Frissell, Christopher A.; Muhlfeld, Clint C.; Fred W. Allendorf

    2003-01-01

    We examined spatial and temporal patterns of hybridization between native westslope cutthroat trout, Oncorhynchus clarki lewisi, and nonnative rainbow trout, O. mykiss, in streams of the Flathead River system in Montana, U.S.A. We detected hybridization in 24 of 42 sites sampled from 1998 to 2001. We found new Oncorhynchus mykiss introgression in seven of 11 sample populations that were determined to be nonhybridized in 1984. Patterns of spatial autocorrelation and linkage disequilibrium indicated that hybridization is spreading among sites and is advancing primarily via post-F1 hybrids. Although hybridized populations were distributed widely throughout the study area, the genetic contribution from O. mykiss decreased with increasing upstream distance from the Flathead River mainstem, suggesting that O. mykiss introgression is spreading in an upstream direction. The spread of hybridization may be constrained more by demographic than by environmental factors, given that (i) hybridized populations generally encompassed the range of environmental variability in nonhybridized populations, and (ii) hybridization status was more strongly associated with neighborhood statistics than measured environmental gradients.

  3. Experimental evaluation of rainbow trout Oncorhynchus mykiss predation on longnose dace Rhinichthys cataractae

    USGS Publications Warehouse

    Turek, Kelly C.; Pegg, Mark A.; Pope, Kevin L.

    2014-01-01

    Laboratory and in-stream enclosure experiments were used to determine whether rainbow trout Oncorhynchus mykiss influence survival of longnose dace Rhinichthys cataractae. In the laboratory, adult rainbow trout preyed on longnose dace in 42% of trials and juvenile rainbow trout did not prey on longnose dace during the first 6 h after rainbow trout introduction. Survival of longnose dace did not differ in the presence of adult rainbow trout previously exposed to active prey and those not previously exposed to active prey ( = 0.28, P = 0.60). In field enclosures, the number of longnose dace decreased at a faster rate in the presence of rainbow trout relative to controls within the first 72 h, but did not differ between moderate and high densities of rainbow trout (F2,258.9 = 3.73, P = 0.03). Additionally, longnose dace were found in 7% of rainbow trout stomachs after 72 h in enclosures. Rainbow trout acclimated to the stream for longer periods had a greater initial influence on the number of longnose dace remaining in enclosures relative to those acclimated for shorter periods regardless of rainbow trout density treatment (F4,148.5 = 2.50, P = 0.04). More research is needed to determine how predation rates will change in natural environments, under differing amounts of habitat and food resources and in the context of whole assemblages. However, if rainbow trout are introduced into the habitat of longnose dace, some predation on longnose dace is expected, even when rainbow trout have no previous experience with active prey.

  4. Preservation Methods for Retaining n-3 Polyunsaturated Fatty Acids in Alaska Coho Salmon (Oncorhynchus kisutch) Products

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Coho salmon (Oncorhynchus kisutch) fillets were processed using five different methods (smoking, canning, freezing, acidifying, and salting) to evaluate the effect of preservation choice on the quality of polyunsaturated fatty acids (PUFA). Salmon preserved by smoking, canning, or freezing retained ...

  5. SYSTEMIC HEXAMITID (PROTOZOA: DIPLOMONADIDA) INFECTION IN SEAWATER PEN-REARED CHINOOK SALMON ONCORHYNCHUS TSSHAWYTSCHA

    EPA Science Inventory

    A systemic infection with a diplomonad flagellate resembling Hexamita salmonis caused high mortality in chinook salmon, Oncorhynchus tshawytscha, reared at a seawater netpen farm in British Columbia, Canada. ffected fish were anemic and had swollen abdomens containing serosanguin...

  6. An Inventory of Catch and Escapement Data for Columbia River Salmon and Steelhead, 1987 Final Report.

    SciTech Connect

    Martin, Douglas J.; Stull, Elizabeth Ann

    1987-03-01

    The work described in this report was part of a larger project conducted by Argonne National Laboratory (ANL) for the Bonneville Power Administration (BPA) to determine appropriate methods for assessing the cumulative effects of hydroelectric development in the Columbia River Basin. One portion of that project was to develop an inventory of catch and escapement data for Columbia River salmon and steelhead and to determine if enough relevant data are available for spawner-recruit analysis. This inventory was to include not the actual data but, rather, only the source, nature, and the extent of data needed to conduct a spawner-recruit analysis. Spawner-recruit analysis is one of several methodologies with possible utility for assessing the cumulative effects of hydroelectric development in the Columbia River Basin. The information presented in this report is not a complete inventory of catch and escapement data for Columbia River salmonids. Some information was omitted, either because of delays in responses by agencies to information requests, or because certain data sources, not widely known to exist, could not be located. 77 refs., 73 tabs.

  7. Rapid Diagnosis of IHN Virus Infection in Salmon and Steelhead Trout, Final Report.

    SciTech Connect

    Leong, JoAnn Ching

    1984-12-01

    The main objective for this study was the development of a rapid diagnostic method for IHN virus in fish tissue samples. The rationale for developing new techniques for diagnosing IHNV infection was that present methods were time consuming and dependent on virus neutralization by specific antisera, a reagent that was not readily available or reliable. Fish pathologists required a rapid detection method which was sensitive enough to detect virus strain differences so that they could provide data for effective management decisions in controlling the spread of IHNV. Bonneville Power Administration's (BPA) role in efforts in fish diseases and more generically the protection, mitigation, and enhancement of Columbia River salmon and steelhead populations, is mandated by Congress through the Pacific Northwest Electric Power Planning and Conservation Act (Regional Act), Pub. L. 96-501. Section 4 (h) of the Regional Act directs the Northwest Power Planning Council to develop a Fish and Wildlife Program. BPA's Administrator is authorized in Section 4 (h) (10) (A) to ''use funds and the authorities available to the extent affected by the development and operation of any hydroelectric project of the Columbia River and its tributaries''. The fund is to be used to implement measures that are consistent with the Council's Fish and Wildlife Program. The research detailed in this final report is consistent with these objectives. This final report has been prepared as part of BPA's policy to encourage the preservation and dissemination of research results by publication in scientific journals.

  8. Gyrodactylid Ectoparasites in a Population of Rainbow Trout (Oncorhynchus mykiss)

    PubMed Central

    Garcia, Rachel L; Hansen, Adam G; Chan, Maia M; Sanders, George E

    2014-01-01

    A colony of rainbow trout (Oncorhynchus mykiss) in a decentralized aquatic animal facility was noted to have an increase in morbidity and mortality (from 4 or 5 fish each month to 3 or 4 fish daily) approximately 2 wk after experimental procedures began. The primary clinical signs were erratic swimming behavior and ‘flashing’ of fish against surfaces within housing enclosures. Moribund and normal rainbow trout were presented alive for diagnostic evaluation; samples of water from housing enclosures were provided for water quality assessment. The trout were determined to be infected with gyrodactylids, a common monogenean ectoparasite of the skin and gills in both marine and freshwater fish. This case report describes the diagnosis, pathology, and treatment of gyrodactylids and husbandry modifications associated with the resolution of this clinical aquatic-animal case. PMID:24411786

  9. Anorexia reduces the severity of cryptobiosis in Oncorhynchus mykiss.

    PubMed

    Li, S; Woo, P T

    1991-06-01

    Cryptobia salmositica multiplied more rapidly and caused a more severe disease with a higher mortality (65%) in rainbow trout (Oncorhynchus mykiss) fed a 52% protein diet than in fish fed 37 or 22% protein diets (25 and 30% mortalities, respectively). Also, plasma protein was significantly higher in fish fed a 52% protein diet than in fish fed 37 or 22% protein diets. Anorexia in infected trout was related positively to parasitemia and was most significant at 4 wk postinfection. During the chronic phase of the infection, food consumption increased with declining parasitemia. It is hypothesized that anorexia lowers plasma protein level, which reduces the multiplication rate of parasites, thus decreasing the severity of the disease. PMID:2040958

  10. Investigations into the Early Life-history of Naturally Produced Spring Chinook Salmon and Summer Steelhead in the Grande Ronde River Basin, Annual Report 2001.

    SciTech Connect

    Reischauer, Alyssa; Monzyk, Frederick; Van Dyke, Erick

    2003-06-01

    We determined migration timing and abundance of juvenile spring chinook salmon Oncorhynchus tshawytscha and juvenile steelhead/rainbow trout Oncorhynchus mykiss using rotary screw traps on four streams in the Grande Ronde River basin during the 2001 migratory year (MY 2001) from 1 July 2000 through 30 June 2001. Based on migration timing and abundance, two distinct life-history strategies of juvenile spring chinook and O. mykiss could be distinguished. An 'early' migrant group left upper rearing areas from 1 July 2000 through 29 January 2001 with a peak in the fall. A 'late' migrant group descended from upper rearing areas from 30 January 2001 through 30 June 2001 with a peak in the spring. The migrant population of juvenile spring chinook salmon in the upper Grande Ronde River in MY 2001 was very low in comparison to previous migratory years. We estimated 51 juvenile spring chinook migrated out of upper rearing areas with approximately 12% of the migrant population leaving as early migrants to overwinter downstream. In the same migratory year, we estimated 16,067 O. mykiss migrants left upper rearing areas with approximately 4% of these fish descending the upper Grande Ronde River as early migrants. At the Catherine Creek trap, we estimated 21,937 juvenile spring chinook migrants in MY 2001. Of these migrants, 87% left upper rearing areas early to overwinter downstream. We also estimated 20,586 O. mykiss migrants in Catherine Creek with 44% leaving upper rearing areas early to overwinter downstream. At the Lostine River trap, we estimated 13,610 juvenile spring chinook migrated out of upper rearing areas with approximately 77% migrating early. We estimated 16,690 O. mykiss migrated out of the Lostine River with approximately 46% descending the river as early migrants. At the Minam River trap, we estimated 28,209 juvenile spring chinook migrated out of the river with 36% migrating early. During the same period, we estimated 28,113 O. mykiss with approximately 14

  11. Variation in the Early Marine Survival and Behavior of Natural and Hatchery-Reared Hood Canal Steelhead

    PubMed Central

    Moore, Megan; Berejikian, Barry A.; Tezak, Eugene P.

    2012-01-01

    Background Hatchery-induced selection and direct effects of the culture environment can both cause captively bred fish populations to survive at low rates and behave unnaturally in the wild. New approaches to fish rearing in conservation hatcheries seek to reduce hatchery-induced selection, maintain genetic resources, and improve the survival of released fish. Methodology/Principal Findings This study used acoustic telemetry to compare three years of early marine survival estimates for two wild steelhead populations to survival of two populations raised at two different conservation hatcheries located within the Hood Canal watershed. Steelhead smolts from one conservation hatchery survived with probabilities similar to the two wild populations (freshwater: 95.8–96.9%, early marine: 10.0–15.9%), while smolts from the other conservation hatchery exhibited reduced freshwater and early marine survival (freshwater: 50.2–58.7%, early marine: 2.6–5.1%). Freshwater and marine travel rates did not differ significantly between wild and hatchery individuals from the same stock, though hatchery smolts did display reduced migration ranges within Hood Canal. Between-hatchery differences in rearing density and vessel geometry likely affected survival and behavior after release and contributed to greater variation between hatcheries than between wild populations. Conclusions/Significance Our results suggest that hatchery-reared smolts can achieve early marine survival rates similar to wild smolt survival rates, and that migration performance of hatchery-reared steelhead can vary substantially depending on the environmental conditions and practices employed during captivity. PMID:23185393

  12. Compliance Monitoring of Yearling and Subyearling Chinook Salmon and Juvenile Steelhead Survival and Passage at John Day Dam, 2012

    SciTech Connect

    Skalski, J. R.; Townsend, Richard L.; Seaburg, Adam; Weiland, Mark A.; Woodley, Christa M.; Hughes, James S.; Ploskey, Gene R.; Deng, Zhiqun; Carlson, Thomas J.

    2013-05-01

    The purpose of this compliance study was to estimate dam passage survival of yearling and subyearling Chinook salmon and steelhead smolts at John Day Dam during the spring and summer outmigrations in 2012. Under the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp), dam passage survival should be greater than or equal to 0.96 for spring migrants and greater than or equal to 0.93 for summer migrants, estimated with a standard error (SE) less than or equal to 0.015. The study also estimated smolt passage survival from the forebay 2 km upstream of the dam to the tailrace 3 km downstream of the dam, as well as the forebay residence time, tailrace egress time, spill passage efficiency (SPE), and fish passage efficiency (FPE), as required in the Columbia Basin Fish Accords (Fish Accords). A virtual/paired-release design was used to estimate dam passage survival at John Day Dam. The approach included releases of smolts, tagged with acoustic micro-transmitters, above John Day Dam that contributed to the formation of a virtual release at the face of John Day Dam. A survival estimate from this release was adjusted by a paired release below John Day Dam. A total of 3376 yearling Chinook salmon, 5726 subyearling Chinook salmon, and 3239 steelhead smolts were used in the virtual releases. Sample sizes for the below-dam paired releases (R2 and R3, respectively) were 997 and 995 for yearling Chinook salmon smolts, 986 and 983 for subyearling Chinook salmon smolts, and 1000 and 1000 for steelhead smolts. The Juvenile Salmon Acoustic Telemetry System (JSATS) tags were manufactured by Advanced Telemetry Systems. Model SS300 tags, weighing 0.304 g in air, were surgically implanted in yearling and subyearling Chinook salmon, and Model SS130 tag, weighing 0.438 g in air, were surgically implanted in juvenile steelhead for this investigation. The intent of the spring study was to estimate dam passage survival during both 30% and 40% spill conditions. The two

  13. Minthorn Springs Creek Summer Juvenile Release and Adult Collection Facility; Operation, Maintenance and Evaluation of the Bonifer and Minthorn Springs Juvenile Release and Adult Collection Facilities, 1989 Annual Report.

    SciTech Connect

    Lofy, Peter T.; Rowan, Gerald D.

    1990-03-01

    The Confederated Tribes of the Umatilla Indian Reservation and Oregon Department of Fish and Wildlife (ODFW) are cooperating in a joint effort to increase steelhead and re-establish salmon runs in the Umatilla River Basin. As part of this program, Bonifer and Minthorn Acclimation Facilities are operated for holding and spawning adult steelhead and acclimation and release of juvenile salmon and steelhead. Regularly-scheduled maintenance was completed in 1989. Equipment and pumps received maintenance and repair. An automatic dialing system was incorporated into the alarm system at the Minthorn facility. A security company has replaced the function of the Umatilla Tribal Police which was to contact fisheries personnel in case of an alarm. The configuration of the alarm system was upgraded to activate the alarm faster and provide better access to project personnel with a pager system. A survey was completed in 1988 by Thomas Bumstead of Albrook Hydraulics Lab in Pullman, WA. to determine potential measures to address the change in course of the Umatilla River around Minthorn as a result of the flood of 1986. Options and recommendations were submitted in a report in 1989. Fish Management Consultants Inc. submitted the final reports of evaluations for both the Bonifer and Minthorn facilities. A total of 150 adult steelhead were collected for broodstock at Threemile Dam from December through March and held at Minthorn. Forty-two pairs were spawned (37 pairs from Minthorn and 5 pairs collected and immediately spawned at Threemile Dam). The 241,682 eggs were transferred to Irrigon Hatchery for incubation and later moved to Oak Springs Hatchery for rearing. An estimated 368 adult hatchery steelhead returned to the Umatilla River in 1988-89 (based on Threemile Dam trap counts and harvest below Threemile Dam) these, and 349 were released upriver. Of seven returned to the Bonifer trap where the smolts were initially released. Acclimation of 79,984 spring chinook salmon and 22

  14. Real-time PCR for quantification of viable Renibacterium salmoninarum in chum salmon Oncorhynchus keta.

    PubMed

    Suzuki, Kunio; Sakai, D K

    2007-03-13

    Quantification of msa gene mRNA of Renibacterium salmoninarum, the causative agent of bacterial kidney disease (BKD), was investigated using reverse transcription followed by real-time PCR assay on R. salmoninarum in culture, and in experimentally challenged chum salmon Oncorhynchus keta fry kidney tissues (total of 70 samples) after intraperitoneal (i.p.) injection and bath infection. Correlations of msa gene mRNA concentrations with culturable cell concentrations (as colony forming units [CFU]), determined by drop-plate culture method on selective kidney disease medium (SKDM) agar through a 12 wk incubation time, and msa gene DNA concentrations by real-time PCR assay were examined. Furthermore, ovarian fluid samples from wild chum salmon adults with no clinical signs of disease were collected from 8 rivers and from clinically infected kokanee 0. nerka and masu salmon O. masou that were reared in 1 and 2 hatcheries, respectively (total of 414 samples). All samples were examined by nested PCR assay. Then, positive samples were examined by real-time PCR assays for mRNA and DNA; mRNA was detectable at 8 log units (5.0 x 101 to 5.0 x 10(9) copies p11(-1)) with high correlation (R2 = 0.999). The mRNA concentration correlated with CFU in kidney tissue from fish infected by i.p. injection (R2 = 0.924), by bath infection (R2 = 0.502) and in culture (R2 = 0.888). R. salmoninarum was detected and quantified by real-time PCR assay for mRNA in ovarian fluid samples in both subclinically infected chum salmon adults and clinically infected kokanee and masu salmon adults; detection rates ranged from 0 to 44.4% and concentrations ranged from 9.7 x 10(2) to 5.6 x 10(5) copies pl(-1). These results indicate that real-time PCR assay for the mRNA is a rapid, sensitive and reliable method to detect and quantify the viability of R. salmoninarum in kidney and ovarian fluid samples of salmonid fishes with both clinical and subclinical infection of the pathogen. PMID:17465306

  15. Pesticides and PCBs in Pacific salmon (Oncorhynchus tshawytscha and O. kisutch) from Puget Sound, Washington

    SciTech Connect

    O`Neill, S.M.; West, J.E.

    1995-12-31

    The Washington Department of Fish and Wildlife initiated a long-term study to monitor levels of contaminants in two species of Pacific salmon (Oncorhynchus tshawytscha and O. kisutch) and other marine fishes of Puget Sound. The study is one component of the Puget Sound Ambient Monitoring Program (PSAMP), a multi-agency effort to assess the environmental health of Puget Sound. Here the authors summarize results from their ongoing study of O. tshawytscha and O. kisutch. Samples of muscle tissue were collected for chemical analyses from adult salmon that were purchased from licensed fish buyers or treaty tribal fisherman. From 1992 through 1994, both salmon species were sampled at seven fishing areas in marine waters and river mouths of Puget Sound. 4,4-DDE and 4,4-DDD, metabolites of the pesticide DDT, and polychlorinated biphenyls (PCBS) were consistently detected in both species and were consistently higher in O. tshawytscha. Low to moderate concentrations of DDT metabolites (3 to 59 ug/kg wet weight) were detected in the salmon samples but were seldom detected in other fish species sampled by PSAMP. Total PCBs concentrations (Arochlor 1254 + 1260) ranged from 10 to 211 ug/kg wet weight in 0. tshawytscha, with many samples containing PCBs concentrations similar to those detected in benthic flatfish, (Pleuronectes vetulus), sampled from urbanized embayments. A stepwise linear regression model was used to identify parameters correlated with accumulation of PCBs and DDT metabolites in salmon. In addition to species differences, factors such as fish age, percent lipids and sampling location may affect the accumulation of these contaminants. Results of this study are contrasted with contaminant levels previously reported for Canadian and Alaskan Pacific salmon. Possible sources of contaminants are outlined.

  16. Linking Personality to Larval Energy Reserves in Rainbow Trout (Oncorhynchus mykiss)

    PubMed Central

    Andersson, Madelene Åberg; Höglund, Erik

    2012-01-01

    There is a surging interest in the evolution, ecology and physiology of personality differences. However, most of the studies in this research area have been performed in adult animals. Trait variations expressed early in development and how they are related to the ontogeny of an animal’s personality are far less studied. Genetic differences as well as environmental factors causing functional variability of the central serotonergic system have been related to personality differences in vertebrates, including humans. Such gene-environment interplay suggests that the central serotonergic system plays an important role in the ontogeny of personality traits. In salmonid fishes, the timing of emergence from spawning nests is related to energy reserves, aggression, and social dominance. However, it is currently unknown how the size of the yolk reserve is reflected on aggression and dominance, or if these traits are linked to differences in serotonergic transmission in newly emerged larvae. In this study we investigated the relationship between yolk reserves, social dominance, and serotonergic transmission in newly emerged rainbow trout (Oncorhynchus mykiss) larvae. This was conducted by allowing larvae with the same emergence time, but with different yolk sizes, to interact in pairs for 24 h. The results show that individuals with larger yolks performed more aggressive acts, resulting in a suppression of aggression in individuals with smaller yolks. A higher brain serotonergic activity confirmed subordination in larvae with small yolks. The relationship between social dominance and yolk size was present in siblings, demonstrating a link between interfamily variation in energy reserves and aggression, and suggests that larger yolk reserves fuel a more aggressive personality during the initial territorial establishment in salmonid fishes. Furthermore, socially naïve larvae with big yolks had lower serotonin levels, suggesting that other factors than the social

  17. Persistent infections of fish cell lines by paramyxovirus isolates from Chinook salmon (Oncorhynchus tschawytscha)

    USGS Publications Warehouse

    Lannan, C.N.

    1989-01-01

    We have reported the isolation of a paramyxovirus from stocks of adult chinook salmon (Oncorhynchus tshawytscha) returning to coastal rivers of Oregon, USA (Winton et al 1985). The isolates were obtained from kidney and spleen tissues using the chinook salmon embryo cell line, CHSE-214. Initial cytopathic effect (CPE) was slow to develop, requiring 28 days incubation at 18°C. The virus replicated in CHSE-214, chum heart (CHH-1), kokanee ovary (K0-6), coho salmon embryo (CSE-119), and fathead minnow (FHM) cell lines where it produced a lytic type of CPE.The virus was stable at pH 3-11 and iodo-deoxyuridine did not inhibit wiral replication. Infectivity was lost after treatment with chloroform indicating the presence of essential lipids. The density of virions in CsCl was 1.2 g/ml. The virus hemagglutinated cells of 11 of 14 species of birds, mammals, and fish tested. Electron microscopy of infected cells revealed enveloped particles 125-250 nm in dia. containing coiled nucleocapsids and examination of freon-treated virions showed the nucleocapsid was a helix approximately 18 nm in dia. and > 1000 nm in length (Winton et al 1985).In addition to causing hemagglutination, members of the Paramyxoviridae are known for the ability to establish persistent infections of cell lines (Choppin and Compans 1975). The purpose of this study was to determine if the paramyxovirus isolates from salmon were able to establish persistent infections in fish cell lines and to study the nature of the infection.

  18. Quantitative genetics of migration-related traits in rainbow and steelhead trout.

    PubMed

    Hecht, Benjamin C; Hard, Jeffrey J; Thrower, Frank P; Nichols, Krista M

    2015-05-01

    Rainbow trout (Oncorhynchus mykiss) exhibit remarkable life history diversity throughout their native range, and among the most evident is variation in migratory propensity. Although some populations and ecotypes will remain resident in freshwater habitats throughout their life history, others have the ability to undertake tremendous marine migrations. Those that migrate undergo a suite of behavioral, morphological, and physiological adaptations in a process called smoltification. We describe a quantitative genetic analysis of 22 growth, size, and morphological traits in addition to overall life history classification (resident or migrant) over the temporal process of smoltification in a large multi-generation experimental pedigree (n = 16,139) of migratory and resident rainbow trout derived from a wild population, which naturally segregates for migratory propensity. We identify significant additive genetic variance and covariance among the suite of traits that make up a component of the migratory syndrome in this species. Additionally, we identify high heritability estimates for the life history classifications and observe a strong negative genetic correlation between the migratory and resident life history trajectories. Given the large heritability estimates of all of the traits that segregate between migratory and resident rainbow trout, we conclude that these traits can respond to selection. However, given the high degree of genetic correlation between these traits, they do not evolve in isolation, but rather as a suite of coordinated characters in a predictable manner. PMID:25784164

  19. Quantitative Genetics of Migration-Related Traits in Rainbow and Steelhead Trout

    PubMed Central

    Hecht, Benjamin C.; Hard, Jeffrey J.; Thrower, Frank P.

    2015-01-01

    Rainbow trout (Oncorhynchus mykiss) exhibit remarkable life history diversity throughout their native range, and among the most evident is variation in migratory propensity. Although some populations and ecotypes will remain resident in freshwater habitats throughout their life history, others have the ability to undertake tremendous marine migrations. Those that migrate undergo a suite of behavioral, morphological, and physiological adaptations in a process called smoltification. We describe a quantitative genetic analysis of 22 growth, size, and morphological traits in addition to overall life history classification (resident or migrant) over the temporal process of smoltification in a large multi-generation experimental pedigree (n = 16,139) of migratory and resident rainbow trout derived from a wild population, which naturally segregates for migratory propensity. We identify significant additive genetic variance and covariance among the suite of traits that make up a component of the migratory syndrome in this species. Additionally, we identify high heritability estimates for the life history classifications and observe a strong negative genetic correlation between the migratory and resident life history trajectories. Given the large heritability estimates of all of the traits that segregate between migratory and resident rainbow trout, we conclude that these traits can respond to selection. However, given the high degree of genetic correlation between these traits, they do not evolve in isolation, but rather as a suite of coordinated characters in a predictable manner. PMID:25784164

  20. Effects of Renibacterium salmoninarum on olfactory organs of Chinook salmon (Oncorhynchus tshawytscha) marked with coded wire tags

    USGS Publications Warehouse

    Elliott, Diane G.; Conway, Carla M.

    2014-01-01

    Bacterial kidney disease (BKD) caused by Renibacterium salmoninarum can cause significant morbidity and mortality in Chinook salmon (Oncorhynchus tshawytscha), particularly in Chinook salmon of the stream (spring) life history type, which migrate to sea as yearlings rather than subyearlings. R. salmoninarum can be transmitted vertically from the female parent to the progeny in association with the egg, as well as horizontally from fish to fish. This study was conducted as part of a research project to investigate whether the prevalence and intensity of R. salmoninarum infections in adult spring Chinook salmon could affect the survival and pathogen prevalence and intensity in their progeny (Pascho et al., 1991, 1993; Elliott et al., 1995). Fish from two brood years (1988 and 1989) were reared at Dworshak National Fish Hatchery (Idaho, USA) for about 1-1/2 years, released as yearling smolts, and allowed to migrate to the Pacific Ocean for maturation. The majority of progeny fish were marked with coded wire tags (CWTs) about 4 months before they were released from the hatchery so that adult returns could be monitored. The CWTs were implanted in the snouts of the fish by an experienced team of fish markers using automated wire-tagging machines. The intended placement site was the cartilage, skeletal muscle or loose connective tissue of the snout.

  1. Complement fixing antibody production in thymectomized Oncorhynchus mykiss, vaccinated against or infected with the pathogenic haemoflagellate Cryptobia salmositica.

    PubMed

    Feng, S; Woo, P T

    1997-01-01

    Short-term thymectomized (two months after thymectomy) adult rainbow trout, Oncorhynchus mykiss (Walbaum) infected with the flagellate Cryptobia salmositica Katz, 1951 responded well during primary infection with C. salmositica and recovered fish also showed secondary response (rapid production of complement fixing antibody after homologous challenge) five months after recovery. Complement fixing antibody was detected during primary and secondary responses and the titres of complement fixing antibody in thymectomized fish were significantly lower than those in infected intact fish. The parasitaemia in thymectomized infected fish was significantly lower than in intact infected fish. Both recovered thymectomized fish and intact fish were protected from cryptobiosis when they were challenged. Similarly, long-term thymectomized fish (nine months after thymectomy) vaccinated with an attenuated strain of C. salmositica were protected from cryptobiosis. There were no significant difference (P > 0.05) in parasitaemia, packed cell volume and complement fixing antibody titres between vaccinated/challenged thymectomized and vaccinated/challenged intact fish. Hence, thymectomy in adult rainbow trout did not decrease the detectable complement fixing antibody against C. salmositica in long-term thymectomized fish but reduced the detectable protective antibody in short-term thymectomized fish. PMID:9332978

  2. Umatilla Hatchery Satellite Facilities Operation and Maintenance; 1995 Annual Report.

    SciTech Connect

    Rowan, Gerald D.

    1996-05-01

    The Confederated Tribes of the Umatilla Indian Reservoir (CTUIR) and Oregon Department of Fish and Wildlife (ODFW) are cooperating in a joint effort to enhance steelhead and re-establish salmon runs in the Umatilla River Basin. As an integral part of this program, Bonifer Pond, Minthorn Springs, Imeques C-mem-ini-kem and Thornhollow facilities are operated for acclimation and release of juvenile summer steelhead (Oncorhynchus mykiss), fall and spring chinook salmon (O. tshawytscha) and coho salmon (O. kisutch). Minthorn is also used for holding and spawning adult summer steelhead, fall chinook and coho salmon. Personnel from the ODFW Eastern Oregon Fish Pathology Laboratory in La Grande took samples of tissues and reproductive fluids from Umatilla River summer steelhead and coho salmon broodstock for monitoring and evaluation purposes. Coded-wire tag recovery information was accessed to determine the contribution of Umatilla river releases to ocean, Columbia River and Umatilla River fisheries.

  3. Relative contributions of neutral and non-neutral genetic differentiation to inform conservation of steelhead trout across highly variable landscapes.

    PubMed

    Matala, Andrew P; Ackerman, Michael W; Campbell, Matthew R; Narum, Shawn R

    2014-06-01

    Mounting evidence of climatic effects on riverine environments and adaptive responses of fishes have elicited growing conservation concerns. Measures to rectify population declines include assessment of local extinction risk, population ecology, viability, and genetic differentiation. While conservation planning has been largely informed by neutral genetic structure, there has been a dearth of critical information regarding the role of non-neutral or functional genetic variation. We evaluated genetic variation among steelhead trout of the Columbia River Basin, which supports diverse populations distributed among dynamic landscapes. We categorized 188 SNP loci as either putatively neutral or candidates for divergent selection (non-neutral) using a multitest association approach. Neutral variation distinguished lineages and defined broad-scale population structure consistent with previous studies, but fine-scale resolution was also detected at levels not previously observed. Within distinct coastal and inland lineages, we identified nine and 22 candidate loci commonly associated with precipitation or temperature variables and putatively under divergent selection. Observed patterns of non-neutral variation suggest overall climate is likely to shape local adaptation (e.g., potential rapid evolution) of steelhead trout in the Columbia River region. Broad geographic patterns of neutral and non-neutral variation demonstrated here can be used to accommodate priorities for regional management and inform long-term conservation of this species. PMID:25067950

  4. Relative contributions of neutral and non-neutral genetic differentiation to inform conservation of steelhead trout across highly variable landscapes

    PubMed Central

    Matala, Andrew P; Ackerman, Michael W; Campbell, Matthew R; Narum, Shawn R

    2014-01-01

    Mounting evidence of climatic effects on riverine environments and adaptive responses of fishes have elicited growing conservation concerns. Measures to rectify population declines include assessment of local extinction risk, population ecology, viability, and genetic differentiation. While conservation planning has been largely informed by neutral genetic structure, there has been a dearth of critical information regarding the role of non-neutral or functional genetic variation. We evaluated genetic variation among steelhead trout of the Columbia River Basin, which supports diverse populations distributed among dynamic landscapes. We categorized 188 SNP loci as either putatively neutral or candidates for divergent selection (non-neutral) using a multitest association approach. Neutral variation distinguished lineages and defined broad-scale population structure consistent with previous studies, but fine-scale resolution was also detected at levels not previously observed. Within distinct coastal and inland lineages, we identified nine and 22 candidate loci commonly associated with precipitation or temperature variables and putatively under divergent selection. Observed patterns of non-neutral variation suggest overall climate is likely to shape local adaptation (e.g., potential rapid evolution) of steelhead trout in the Columbia River region. Broad geographic patterns of neutral and non-neutral variation demonstrated here can be used to accommodate priorities for regional management and inform long-term conservation of this species. PMID:25067950

  5. Route-Specific Passage and Survival of Steelhead Kelts at The Dalles and Bonneville Dams, 2012 - Final Report

    SciTech Connect

    Rayamajhi, Bishes; Ploskey, Gene R.; Woodley, Christa M.; Weiland, Mark A.; Faber, Derek M.; Kim, Jin A.; Colotelo, Alison HA; Deng, Zhiqun; Fu, Tao

    2013-07-31

    This study was mainly focused on evaluating the route-specific passage and migration success of steelhead kelts passing downstream through The Dalles Dam (TDA) and Bonneville Dam (BON) at Columbia River (CR) river kilometers 309 and 234 respectively. Oregon Department of Fish and Wildlife (ODFW) personnel collected, tagged and released out-migrating steelhead kelts in the tributaries of the Deschutes River, 15 Mile Creek and Hood River between April 14 and June 4, 2012. A PIT tag was injected into each kelt’s dorsal sinus whereas a Juvenile Salmon Acoustic Telemetry System (JSATS) acoustic micro-transmitter was attached to an external FLoy T-bar tag and inserted into the dorsal back musculature using a Floy tagging gun. JSATS cabled arrays were deployed at TDA and BON and autonomous node arrays were deployed near Celilo, Oregon (CR325); the BON forebay (CR236); the BON tailrace (CR233); near Knapp, Washington (CR156); and near Kalama, Washington (CR113) to monitor the kelts movement while passing through the dams and above mentioned river cross-sections.

  6. Factors Affecting Route Selection and Survival of Steelhead Kelts at Snake River Dams in 2012 and 2013

    SciTech Connect

    Harnish, Ryan A.; Colotelo, Alison HA; Li, Xinya; Ham, Kenneth D.; Deng, Zhiqun

    2014-12-15

    In 2012 and 2013, Pacific Northwest National Laboratory conducted a study that summarized the passage proportions and route-specific survival rates of steelhead kelts that passed through Federal Columbia River Power System (FCRPS) dams. To accomplish this, a total of 811 steelhead kelts were tagged with Juvenile Salmon Acoustic Telemetry System (JSATS) transmitters. Acoustic receivers, both autonomous and cabled, were deployed throughout the FCRPS to monitor the downstream movements of tagged-kelts. Kelts were also tagged with Passive Integrated Transponder tags to monitor passage through juvenile bypass systems and detect returning fish. The current study evaluated data collected in 2012 and 2013 to identify individual, behavioral, environmental and dam operation variables that were related to passage and survival of steelhead kelts that passed through FCRPS dams. Bayesian model averaging of multivariable logistic regression models was used to identify the environmental, temporal, operational, individual, and behavioral variables that had the highest probability of influencing the route of passage and the route-specific survival probabilities for kelts that passed Lower Granite (LGR), Little Goose (LGS), and Lower Monumental (LMN) dams in 2012 and 2013. The posterior probabilities of the best models for predicting route of passage ranged from 0.106 for traditional spill at LMN to 0.720 for turbine passage at LGS. Generally, the behavior (depth and near-dam searching activity) of kelts in the forebay appeared to have the greatest influence on their route of passage. Shallower-migrating kelts had a higher probability of passing via the weir and deeper-migrating kelts had a higher probability of passing via the JBS and turbines than other routes. Kelts that displayed a higher level of near-dam searching activity had a higher probability of passing via the spillway weir and those that did less near-dam searching had a higher probability of passing via the JBS and

  7. Imprinting Hatchery Reared Salmon and Steelhead Trout for Homing, Volume III of III; Disease and Physiology Supplements, 1978-1983 Final Report.

    SciTech Connect

    Slatick, Emil; Gilbreath, Lyle G.; Harmon, Jerrel R.

    1988-02-03

    The main functions of the National Marine Fisheries Service (NMFS) Aquaculture Task biologists and contractual scientists involved in the 1978 homing studies were primarily a surveillance of fish physiology, disease, and relative survival during culture in marine net-pens, to determine if there were any unusual factors that might affect imprinting and homing behavior. The studies were conducted with little background knowledge of the implications of disease and physiology on imprinting and homing in salmonids. The health status of the stocks was quite variable as could be expected. The Dworshak and Wells Hatcheries steelhead suffered from some early stresses in seawater, probably osmoregulatory. The incidences of latent BKD in the Wells and Chelan Hatcheries steelhead and Kooskia Hatchery spring chinook salmon were extremely high, and how these will affect survival in the ocean is not known. Gill enzyme activity in the Dworshak and Chelan Hatcheries steelhead at release was low. Of the steelhead, survival in the Tucannon Hatchery stock will probably be the highest, with Dworshak Hatchery stock the lowest. This report contains five previously published papers.

  8. Minthorn Springs Creek Summer Juvenile Release and Adult Collection Facility; Operation, Maintenance and Evaluation; 1991 Annual Report.

    SciTech Connect

    Rowan, Gerald D.

    1992-06-01

    The Confederated Tribes of the Umatilla Indian Reservation (CTUIR) and Oregon Department of Fish and Wildlife (ODFW) are cooperating in a joint effort to supplement steelhead and re-establish salmon runs in the Umatilla River Basin. As part of this program, Bonifer and Minthorn Acclimation Facilities are operated for holding and spawning adult steelhead and fall chinook salmon and acclimation and release of juvenile salmon and steelhead. Regularly-scheduled maintenance of pumps, equipment and facilities was performed in 1991. Major repairs to one Minthorn pump were required and flood damage at Minthorn necessitated the replacement of rock and gravel around the pump house and steelhead brood holding area. Several modifications to the steelhead brood holding pond were also made to help reduce mortality. These changes appeared to be successful as evidenced by the reduced number of mortalities. Total prespawn mortality in 1990-91 was 10.4%. This compares to 20.0 to 39.0% for the previous three years at Minthorn. A total of 202 adult steelhead were collected for broodstock at Threemile Dam from November, 1990 through April, 1991 and held at Minthorn. Utilizing a 3 x 3 spawning matrix, a total of 410,356 eggs were taken from 64 females. The eggs were transferred to Irrigon Hatchery for incubation and initial rearing. The fish were then transferred to Umatilla Hatchery for further rearing and later release into the Umatilla River. A total of 347 fall chinook salmon were also collected for broodstock at Threemile Dam and held at Minthorn. Using a 1:l spawning ratio, a total of 601,548 eggs were taken from 159 females. They were transferred to Umatilla Hatchery for incubation, rearing and later release into the Umatilla River. Acclimation of 100,505 spring chinook salmon and 42,610 summer steelhead was completed at Bonifer in the spring of 1991. At Minthorn, 152,974 coho and 79,672 fall chinook salmon were acclimated and released. In the fall, 81,144 spring chinook salmon

  9. Oxidative stress in juvenile chinook salmon, Oncorhynchus tshawytscha (Walbaum)

    USGS Publications Warehouse

    Welker, T.L.; Congleton, J.L.

    2004-01-01

    Juvenile chinook salmon, Oncorhynchus tshawytscha (Walbaum), were held in 8-11??C freshwater, starved for 3 days and subjected to a low-water stressor to determine the relationship between the general stress response and oxidative stress. Lipid peroxidation (LPO) levels (lipid hydroperoxides) were measured in kidney, liver and brain samples taken at the beginning of the experiment (0-h unstressed controls) and at 6, 24 and 48 h after application of a continuous low-water stressor. Tissue samples were also taken at 48 h from fish that had not been exposed to the stressor (48-h unstressed controls). Exposure to the low-water stressor affected LPO in kidney and brain tissues. In kidney, LPO decreased 6 h after imposition of the stressor; similar but less pronounced decreases also occurred in the liver and brain. At 48 h, LPO increased (in comparison with 6-h stressed tissues) in the kidney and brain. In comparison with 48-h unstressed controls, LPO levels were higher in the kidney and brain of stressed fish. Although preliminary, results suggest that stress can cause oxidative tissue damage in juvenile chinook salmon. Measures of oxidative stress have shown similar responses to stress in mammals; however, further research is needed to determine the extent of the stress-oxidative stress relationship and the underlying physiological mechanisms in fish.

  10. Recent ecological divergence despite migration in sockeye salmon (Oncorhynchus nerka)

    USGS Publications Warehouse

    Pavey, Scott A.; Nielsen, Jennifer L.; Hamon, Troy R.

    2010-01-01

    Ecological divergence may result when populations experience different selection regimes, but there is considerable discussion about the role of migration at the beginning stages of divergence before reproductive isolating mechanisms have evolved. However, detection of past migration is difficult in current populations and tools to differentiate genetic similarities due to migration versus recent common ancestry are only recently available. Using past volcanic eruption times as a framework, we combine morphological analyses of traits important to reproduction with a coalescent-based genetic analysis of two proximate sockeye salmon (Oncorhynchus nerka) populations. We find that this is the most recent (~500 years, 100 generations) natural ecological divergence recorded in a fish species, and report that this divergence is occurring despite migration. Although studies of fish divergence following the retreat of glaciers (10,000–15,000 years ago) have contributed extensively to our understanding of speciation, the Aniakchak system of sockeye salmon provides a rare example of the initial stages of ecological divergence following natural colonization. Our results show that even in the face of continued migration, populations may diverge in the absence of a physical barrier.

  11. Evaluation of a chinook salmon (Oncorhynchus tshawytscha) bioenergetics model

    USGS Publications Warehouse

    Madenjian, Charles P.; O'Connor, Daniel V.; Chernyak, Sergei M.; Rediske, Richard R.; O'Keefe, James P.

    2004-01-01

    We evaluated the Wisconsin bioenergetics model for chinook salmon (Oncorhynchus tshawytscha) in both the laboratory and the field. Chinook salmon in laboratory tanks were fed alewife (Alosa pseudoharengus), the predominant food of chinook salmon in Lake Michigan. Food consumption and growth by chinook salmon during the experiment were measured. To estimate the efficiency with which chinook salmon retain polychlorinated biphenyls (PCBs) from their food in the laboratory, PCB concentrations of the alewife and of the chinook salmon at both the beginning and end of the experiment were determined. Based on our laboratory evaluation, the bioenergetics model was furnishing unbiased estimates of food consumption by chinook salmon. Additionally, from the laboratory experiment, we calculated that chinook salmon retained 75% of the PCBs contained within their food. In an earlier study, assimilation rate of PCBs to chinook salmon from their food in Lake Michigan was estimated at 53%, thereby suggesting that the model was substantially overestimating food consumption by chinook salmon in Lake Michigan. However, we concluded that field performance of the model could not be accurately assessed because PCB assimilation efficiency is dependent on feeding rate, and feeding rate of chinook salmon was likely much lower in our laboratory tanks than in Lake Michigan.

  12. Proteomic Analysis of Chinook Salmon (Oncorhynchus tshawytscha) Ovarian Fluid

    PubMed Central

    Johnson, Sheri L.; Villarroel, Marsha; Rosengrave, Patrice; Carne, Alan; Kleffmann, Torsten; Lokman, P. Mark; Gemmell, Neil J.

    2014-01-01

    The ovarian, or coelomic, fluid that is released with the egg mass of many fishes is increasingly found to play an important role in several biological processes crucial for reproductive success. These include maintenance of oocyte fertility and developmental competence, prolonging of sperm motility, and enhancing sperm swimming speed. Here we examined if and how the proteome of chinook salmon (Oncorhynchus tshawytscha) ovarian fluid varied among females and then sought to examine the composition of this fluid. Ovarian fluid in chinook salmon was analyzed using 1D SDS PAGE and LC-MS/MS tryptic digest screened against Mascot and Sequest databases. We found marked differences in the number and concentrations of proteins in salmon ovarian fluid across different females. A total of 174 proteins were identified in ovarian fluid, 47 of which were represented by six or more peptides, belonging to one of six Gene Ontology pathways. The response to chemical stimulus and response to hypoxia pathways were best represented, accounting for 26 of the 174 proteins. The current data set provides a resource that furthers our understanding of those factors that influence successful egg production and fertilisation in salmonids and other species. PMID:25089903

  13. Proteomic analysis of chinook salmon (Oncorhynchus tshawytscha) ovarian fluid.

    PubMed

    Johnson, Sheri L; Villarroel, Marsha; Rosengrave, Patrice; Carne, Alan; Kleffmann, Torsten; Lokman, P Mark; Gemmell, Neil J

    2014-01-01

    The ovarian, or coelomic, fluid that is released with the egg mass of many fishes is increasingly found to play an important role in several biological processes crucial for reproductive success. These include maintenance of oocyte fertility and developmental competence, prolonging of sperm motility, and enhancing sperm swimming speed. Here we examined if and how the proteome of chinook salmon (Oncorhynchus tshawytscha) ovarian fluid varied among females and then sought to examine the composition of this fluid. Ovarian fluid in chinook salmon was analyzed using 1D SDS PAGE and LC-MS/MS tryptic digest screened against Mascot and Sequest databases. We found marked differences in the number and concentrations of proteins in salmon ovarian fluid across different females. A total of 174 proteins were identified in ovarian fluid, 47 of which were represented by six or more peptides, belonging to one of six Gene Ontology pathways. The response to chemical stimulus and response to hypoxia pathways were best represented, accounting for 26 of the 174 proteins. The current data set provides a resource that furthers our understanding of those factors that influence successful egg production and fertilisation in salmonids and other species. PMID:25089903

  14. Toxicokinetics of perfluorooctane sulfonate in rainbow trout (Oncorhynchus mykiss).

    PubMed

    Consoer, Daniel M; Hoffman, Alex D; Fitzsimmons, Patrick N; Kosian, Patricia A; Nichols, John W

    2016-03-01

    Rainbow trout (Oncorhynchus mykiss) confined to respirometer-metabolism chambers were dosed with perfluorooctane sulfonate (PFOS) by intra-arterial injection and sampled to obtain concentration time-course data for plasma and either urine or expired water. The data were then analyzed using a 2-compartment clearance-volume model. Renal and branchial clearance rates (mL/d/kg) determined for all experiments averaged 19% and 81% of total clearance, respectively. Expressed as mean values for all experiments, the steady-state volume of distribution was 277 mL/kg and the terminal half-life was 86.8 d. Additional animals were exposed to PFOS in water, resulting in an average calculated branchial uptake efficiency of 0.36%. The renal clearance rate determined in the present study is approximately 75 times lower than that determined in earlier studies with perfluorooctanoate (PFOA). Previously, it was suggested that PFOA is a substrate for membrane transporters in the trout kidney. The present study suggests that glomerular filtration may be sufficient to explain the observed renal clearance rate for PFOS, although a role for membrane transporters cannot be ruled out. These findings demonstrate that models developed to predict the bioaccumulation of perfluoroalkyl acids by fish must account for differences in renal clearance of individual compounds. Environ Toxicol Chem 2016;35:717-727. © 2015 SETAC. PMID:26332333

  15. Virulence of Flavobacterium columnare genomovars in rainbow trout Oncorhynchus mykiss.

    PubMed

    Evenhuis, Jason P; LaFrentz, Benjamin R

    2016-08-01

    Flavobacterium columnare is the causative agent of columnaris disease and is responsible for significant economic losses in aquaculture. F. columnare is a Gram-negative bacterium, and 5 genetic types or genomovars have been described based on restriction fragment length polymorphism of the 16S rRNA gene. Previous research has suggested that genomovar II isolates are more virulent than genomovar I isolates to multiple species of fish, including rainbow trout Oncorhynchus mykiss. In addition, improved genotyping methods have shown that some isolates previously classified as genomovar I, and used in challenge experiments, were in fact genomovar III. Our objective was to confirm previous results with respect to genomovar II virulence, and to determine the susceptibility of rainbow trout to other genomovars. The virulence of 8 genomovar I, 4 genomovar II, 3 genomovar II-B, and 5 genomovar III isolates originating from various sources was determined through 3 independent challenges in rainbow trout using an immersion challenge model. Mean cumulative percent mortality (CPM) of ~49% for genomovar I isolates, ~1% for genomovar II, ~5% for the II-B isolates, and ~7% for the III isolates was observed. The inability of genomovar II isolates to produce mortalities in rainbow trout was unanticipated based on previous studies, but may be due to a number of factors including rainbow trout source and water chemistry. The source of fish and/or the presence of sub-optimal environment may influence the susceptibility of rainbow trout to different F. columnare genomovars. PMID:27503917

  16. Garfield County Habitat for Fall Chinook and Steelhead, Annual Report 2006.

    SciTech Connect

    Bartels, Duane

    2007-01-01

    The objectives and tasks outlined in detail in this project report were implemented during calendar year 2006 in all the watersheds of Garfield County. The Pataha Creek Watershed was selected in 1993, along with the Tucannon and Asotin Creeks, as model watersheds by the Northwest Power and Conservation Council (NPCC). In the years since 1993, other watersheds in Garfield County have been designated as salmon bearing streams and have received numerous practices formerly just designated for the Pataha Creek Watershed. The following sections show the individual practices, quantity of practices implemented, total costs, BPA costs and tons of soil saved for all the BPA funds used to protect and enhance the natural resources in the salmon bearing watersheds of Garfield County. In the year 2006, 55% of the funding received from BPA went into cost share practices. Of all the cost share received in the county, 22% came from BPA. This is largely due to other funding programs becoming available to address livestock influenced water quality problems and riparian health improvement. Over 95% of the sediment entering the streams can be tied directly to the upland and riparian areas of the watershed. The Pataha Creek, Deadman Creek, and Alpowa Creek have had steelhead runs in the past. The Pataha Creek has native and planted rainbow trout in the mid to upper portion. Suckers, pikeminow, and shiners inhabit the lower portion of Pataha Creek because of the higher water temperatures and lack of vegetation. The improvement of riparian habitat through the CREP, CCRP, and DOE grants has improved habitat for all the fish species. The lower portion of the Pataha Creek is slowly developing into spawning and rearing habitat for Chinook salmon. With the future removal of some migration barriers on the lower portion of the Deadman and Pataha, more stream miles will become useful spawning and rearing habitat. The upland projects completed during 2006 were practices that significantly reduce

  17. Monitoring of Downstream Salmon and Steelhead at Federal Hydroelectric Facilities, 2000 Annual Report.

    SciTech Connect

    Martinson, Rick D.; Kovalchuk, Gregory M.; Ballinger, Dean

    2001-05-01

    2000 was the third season in the Smolt Monitoring Facility (SMF) at John Day Dam. Despite the continued presence of the NMFS The Dalles Dam spillway survival study, and a higher target number of study fish, sample numbers were down form 1999. Additionally, the average sample rate this year (25%) was nearly twice the average rate in 1999, (13%). Spill, expressed as a percent of river flow, was up slightly this year, about 3% in the spring and 8% through the summer and fall, which accounts for some of the decline in sample numbers. The largest declines in sample numbers were for yearling and subyearling chinook and wild sockeye. Descaling and mortality rates were very low for all species, the highest descaling was 11.2% for hatchery sockeye. River flow was lower than last year, debris was light, dissolved gas levels were generally below the Oregon and Washington water quality standards, and overall, migration conditions were good. Passage duration was generally similar to last year but timing varied considerably, depending on species. PIT tag detections were down to 41,848 from 138,705 the previous year. Increased spill passage is the likely explanation for the large decline. The Separation by Code component of the system was utilized by three different studies. At Bonneville Dam, index level sampling was transferred from the first powerhouse to the second powerhouse and occurred at the new Hamilton Island Juvenile Monitoring Facility. An estimated 2.7 million fish passed through the bypass system, 54,051 of which were sampled in the new facility. The location and method differ so much from previous years that comparisons are pointless. River conditions were similar to those described for John Day Dam; lower than in 1999, moderate debris, manageable gas levels, and normal temperatures. Passage timing and duration was very similar to last year for the chinook and steelhead but the coho migration started later and ended earlier, and sockeye were just the opposite

  18. Acute mortality, bacterial load and pathology of select lines of adult rainbow trout challenged with Weissella sp. NC36

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A challenge of genetic improvement for disease resistance in fish is to understand specificity of resistance and whether selection for one pathogen alters the response to unrelated pathogenic microorganisms. Adult rainbow trout Oncorhynchus mykiss that had been bred for differential susceptibility...

  19. The floodplain food web mosaic: a study of its importance to salmon and steelhead with implications for their recovery.

    PubMed

    Bellmore, J Ryan; Baxter, Colden V; Martens, Kyle; Connolly, Patrick J

    2013-01-01

    Although numerous studies have attempted to place species of interest within the context of food webs, such efforts have generally occurred at small scales or disregard potentially important spatial heterogeneity. If food web approaches are to be employed to manage species, studies are needed that evaluate the multiple habitats and associated webs of interactions in which these species participate. Here, we quantify the food webs that sustain rearing salmon and steelhead within a floodplain landscape of the Methow River, Washington, USA, a location where restoration has been proposed to restore side channels in an attempt to recover anadromous fishes. We combined year-long measures of production, food demand, and diet composition for the fish assemblage with estimates of invertebrate prey productivity to quantify food webs within the main channel and five different, intact, side channels; ranging from channels that remained connected to the main channel at low flow to those reduced to floodplain ponds. Although we found that habitats within the floodplain had similar invertebrate prey production, these habitats hosted different local food webs. In the main channel, 95% of total prey consumption flowed to fishes that are not the target of proposed restoration. These fishes consumed 64% and 47% of the prey resources that were found to be important to fueling chinook and steelhead production in the main channel, respectively. Conversely, in side channels, a greater proportion of prey was consumed by anadromous salmonids. As a result, carrying capacity estimates based on food were 251% higher, on average, for anadromous salmonids in side channels than the main channel. However, salmon and steelhead production was generally well below estimated capacity in both the main and side channels, suggesting these habitats are under-seeded with respect to food, and that much larger populations could be supported. Overall, this study demonstrates that floodplain heterogeneity is

  20. The floodplain food web mosaic: a study of its importance to salmon and steelhead with implications for their recovery

    USGS Publications Warehouse

    Bellmore, J. Ryan; Baxter, Colden V.; Martens, Kyle; Connolly, Patrick J.

    2013-01-01

    Although numerous studies have attempted to place species of interest within the context of food webs, such efforts have generally occurred at small scales or disregard potentially important spatial heterogeneity. If food web approaches are to be employed to manage species, studies are needed that evaluate the multiple habitats and associated webs of interactions in which these species participate. Here, we quantify the food webs that sustain rearing salmon and steelhead within a floodplain landscape of the Methow River, Washington, USA, a location where restoration has been proposed to restore side channels in an attempt to recover anadromous fishes. We combined year-long measures of production, food demand, and diet composition for the fish assemblage with estimates of invertebrate prey productivity to quantify food webs within the main channel and five different, intact, side channels; ranging from channels that remained connected to the main channel at low flow to those reduced to floodplain ponds. Although we found that habitats within the floodplain had similar invertebrate prey production, these habitats hosted different local food webs. In the main channel, 95% of total prey consumption flowed to fishes that are not the target of proposed restoration. These fishes consumed 64% and 47% of the prey resources that were found to be important to fueling chinook and steelhead production in the main channel, respectively. Conversely, in side channels, a greater proportion of prey was consumed by anadromous salmonids. As a result, carrying capacity estimates based on food were 251% higher, on average, for anadromous salmonids in side channels than the main channel. However, salmon and steelhead production was generally well below estimated capacity in both the main and side channels, suggesting these habitats are under-seeded with respect to food, and that much larger populations could be supported. Overall, this study demonstrates that floodplain heterogeneity is

  1. Interpopulation Comparison of Sex-Biased Mortality and Sexual Size Dimorphism in Sea-Run Masu Salmon, Oncorhynchus masou.

    PubMed

    Tamate, Tsuyoshi

    2015-08-01

    Evolutionary ecologists often expect that natural and sexual selection result in systematic co-occurrence patterns of sex-biased mortality and sexual size dimorphism (SSD) within animal species. However, whether such patterns actually occur in wild animals is poorly examined. The following expectation, the larger sex suffers higher mortality, was primarily tested here for apparently native sea-run masu salmon (Oncorhynchus masou) in three populations in Hokkaido, Japan. Field surveys on sex ratios, body sizes, and ages of smolts and returning adults revealed that two of the three populations exhibited an expected pattern, a female-biased marine mortality and SSD, but one population demonstrated an unexpected co-occurrence of male-biased marine mortality and female-biased SSD. These female-biased SSDs were attributed to faster marine growth of females because of no sex difference in smolt body size. It has been previously suggested that breeding selection favoring large size generally act more strongly in females than in males in Japanese anadromous masu, as there is a weak sexual selection on adult males but universally intensive natural selection on adult females. Thus, this hypothesis explains female-biased SSDs well in all study populations. Interpopulation variation in sex-biased mortality found here might result from differences in marine predation and/or fishing pressures, given that selection driving female-biased SSD makes females forage more aggressively than males during the marine phase. Taken together, these results raise the possibility that evolutionary forces have shaped adaptive sex-specific foraging strategies under relationships between growth and mortality, resulting in co-occurrence patterns of sex-biased mortality and SSD within animal species. PMID:26245223

  2. Apophallus microsoma N. SP. from chicks infected with metacercariae from coho salmon (Oncorhynchus kisutch) and review of the taxonomy and pathology of the genus Apophallus (Heterophyidae).

    PubMed

    Ferguson, Jayde A; Locke, Sean A; Font, William F; Steinauer, Michelle L; Marcogliese, David J; Cojocaru, Calin D; Kent, Michael L

    2012-12-01

    Metacercariae of an unidentified species of Apophallus Lühe, 1909 are associated with overwinter mortality in coho salmon, Oncorhynchus kisutch (Walbaum, 1792), in the West Fork Smith River, Oregon. We infected chicks with these metacercariae in order to identify the species. The average size of adult worms was 197 × 57 μm, which was 2 to 11 times smaller than other described Apophallus species. Eggs were also smaller, but larger in proportion to body size, than in other species of Apophallus. Based on these morphological differences, we describe Apophallus microsoma n. sp. In addition, sequences from the cytochrome c oxidase 1 gene from Apophallus sp. cercariae collected in the study area, which are likely conspecific with experimentally cultivated A. microsoma, differ by >12% from those we obtained from Apophallus donicus ( Skrjabin and Lindtrop, 1919 ) and from Apophallus brevis Ransom, 1920 . The taxonomy and pathology of Apophallus species is reviewed. PMID:22680776

  3. Dorsal hump morphology in pink salmon (Oncorhynchus gorbuscha).

    PubMed

    Susuki, Kenta; Ichimura, Masaki; Koshino, Yosuke; Kaeriyama, Masahide; Takagi, Yasuaki; Adachi, Shinji; Kudo, Hideaki

    2014-05-01

    Mature male Pacific salmon (Genus Oncorhynchus) develop a dorsal hump, as a secondary male sexual characteristic, during the spawning period. Previous gross anatomical studies have indicated that the dorsal humps of salmon are mainly composed of cartilaginous tissue (Davidson [1935] J Morphol 57:169-183.) However, the histological and biochemical characteristics of such humps are poorly understood. In this study, the detailed microstructures and components of the dorsal humps of pink salmon were analyzed using histochemical techniques and electrophoresis. In mature males, free interneural spines and neural spines were located in a line near to the median septum of the dorsal hump. No cartilaginous tissue was detected within the dorsal hump. Fibrous and mucous connective tissues were mainly found in three regions of the dorsal hump: i) the median septum, ii) the distal region, and iii) the crescent-shaped region. Both the median septum and distal region consisted of connective tissue with a high water content, which contained elastic fibers and hyaluronic acid. It was also demonstrated that the lipid content of the dorsal hump connective tissue was markedly decreased in the mature males compared with the immature and maturing males. Although, the crescent-shaped region of the hump consisted of connective tissue, it did not contain elastic fibers, hyaluronic acid, or lipids. In an ultrastructural examination, it was found that all of the connective tissues in the dorsal hump were composed of collagen fibers. Gel electrophoresis of collagen extracts from these tissues found that the collagen in the dorsal hump is composed of Type I collagen, as is the case in salmon skin. These results indicate that in male pink salmon the dorsal hump is formed as a result of an increase in the amount of connective tissue, rather than cartilage, and the growth of free interneural spines and neural spines. PMID:24323872

  4. 77 FR 67796 - Endangered and Threatened Species; Take of Anadromous Fish

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-11-14

    ... patterns of steelhead and rainbow trout in the Ventura Basin and influence between the two life history...) Distinct Population Segment (DPS) of steelhead (Oncorhynchus mykiss). The public is hereby notified of...

  5. Willingness-to-pay for steelhead trout fishing: Implications of two-step consumer decisions with short-run endowments

    NASA Astrophysics Data System (ADS)

    McKean, John R.; Johnson, Donn; Taylor, R. Garth

    2010-09-01

    Choice of the appropriate model of economic behavior is important for the measurement of nonmarket demand and benefits. Several travel cost demand model specifications are currently in use. Uncertainty exists over the efficacy of these approaches, and more theoretical and empirical study is warranted. Thus travel cost models with differing assumptions about labor markets and consumer behavior were applied to estimate the demand for steelhead trout sportfishing on an unimpounded reach of the Snake River near Lewiston, Idaho. We introduce a modified two-step decision model that incorporates endogenous time value using a latent index variable approach. The focus is on the importance of distinguishing between short-run and long-run consumer decision variables in a consistent manner. A modified Barnett two-step decision model was found superior to other models tested.

  6. Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at John Day Dam, Spring 2010

    SciTech Connect

    Weiland, Mark A.; Ploskey, Gene R.; Hughes, James S.; Woodley, Christa M.; Deng, Zhiqun; Carlson, Thomas J.; Skalski, J. R.; Townsend, Richard L.

    2012-11-15

    The purpose of this study was to compare dam passage survival, at two spill treatment levels, of yearling Chinook salmon and steelhead smolts at John Day Dam during spring 2010. The two treatments were 30% and 40% spill out of total project discharge. Under the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp), dam passage survival should be greater than or equal to 0.96 and estimated with a standard error (SE) less than or equal 0.015. The study also estimated forebay residence time, tailrace egress time, and spill passage efficiency (SPE), as required in the Columbia Basin Fish Accords. However, by agreement among the stakeholders, this study was not an official BiOp compliance test because the long-term passage measures at John Day Dam have yet to be finalized and another year of spill-treatment testing was desired.

  7. Monitor and Evaluate the Genetic Characteristics of Supplemented Salmon and Steelhead, 2006-2007 Progress Report.

    SciTech Connect

    Berntson, Ewann; Waples, Robin S.; Moran, Paul

    2008-11-20

    This progress report offers a summary of genetic monitoring and evaluation research related to artificial propagation of Chinook salmon and steelhead in the Snake River basin. Our principal goal has been to characterize the relative (and net) reproductive success of hatchery fish spawning in the wild in multiple sub-basins. We address a critical uncertainty identified in essentially all tribal, state, and federal recovery planning efforts. Beyond simple description of those patterns of differential reproductive success, we seek to understand the biotic and abiotic factors that contribute to our observations, including genetic and environmental elements, and the real time effects of hatchery reform. We adopt two fundamentally different approaches that capture processes operating at different geographic scales. Our tier 2 design monitors changes in gene frequency through time in hatchery and wild populations. These studies monitor spatial and temporal genetic change over broad river basins and sub-basins. Tier 3 studies, by contrast, are able to construct pedigrees in naturally spawning populations that include hatchery and wild fish. We can then use actual matings to infer the fitness of hatchery versus wild individuals, based on the numbers of offspring we observe in our progeny samples. We get extraordinary detail from the tier 3 studies but only for a single river system. Thus, tier 2 studies provide breadth of information, whereas tier 3 studies offer unparalleled depth of insight for single discrete systems. We exceeded our goals in almost all areas for both tier 2 and tier 3 studies, and, where we did not, we offer an explanation of why, and what future action will be taken (Lessons Learned). All subcontracts were let as expected, providing smolt trapping, tissue sampling, genotyping, and analysis. Our inter-laboratory standardization efforts with tribal, state, and federal agencies were highly successful in this period. These standardization activities have

  8. Genetic effects of ELISA-based segregation for control of bacterial kidney disease in Chinook salmon (Oncorhynchus tshawytscha)

    USGS Publications Warehouse

    Hard, J.J.; Elliott, D.G.; Pascho, R.J.; Chase, D.M.; Park, L.K.; Winton, J.R.; Campton, D.E.

    2006-01-01

    We evaluated genetic variation in ability of Chinook salmon (Oncorhynchus tshawytscha) to resist two bacterial pathogens: Renibacterium salmoninarum, the agent of bacterial kidney disease (BKD), and Listonella anguillarum, an agent of vibriosis. After measuring R. salmoninarum antigen in 499 adults by enzyme-linked immunosorbent assay (ELISA), we mated each of 12 males with high or low antigen levels to two females with low to moderate levels and exposed subsets of their progeny to each pathogen separately. We found no correlation between R. salmoninarum antigen level in parents and survival of their progeny following pathogen exposure. We estimated high heritability for resistance to R. salmoninarum (survival h2 = 0.890 ?? 0.256 (mean ?? standard error)) independent of parental antigen level, but low heritability for resistance to L. anguillarum (h2 = 0.128 ?? 0.078). The genetic correlation between these survivals (rA = -0.204 ?? 0.309) was near zero. The genetic and phenotypic correlations between survival and antigen levels among surviving progeny exposed to R. salmoninarum were both negative (rA = -0.716 ?? 0.140; rP = -0.378 ?? 0.041), indicating that variation in antigen level is linked to survival. These results suggest that selective culling of female broodstock with high antigen titers, which is effective in controlling BKD in salmon hatcheries, will not affect resistance of their progeny. ?? 2006 NRC.

  9. Rapid growth in the early marine period improves the marine survival of Chinook salmon (Oncorhynchus tshawytscha) in Puget Sound, Washington

    USGS Publications Warehouse

    Duffy, Elisabeth J.; Beauchamp, David A.

    2011-01-01

    We examined the effect of early marine entry timing and body size on the marine (smolt-to-adult) survival of Puget Sound Chinook salmon (Oncorhynchus tshawytscha). We used data from coded wire tag release groups of hatchery Chinook salmon to test whether hatchery release date, release size, and size in offshore waters in July and September influenced marine survival. Marine survival was most strongly related to the average body size in July, with larger sizes associated with higher survivals. This relationship was consistent over multiple years (1997–2002), suggesting that mortality after July is strongly size-dependent. Release size and date only slightly improved this relationship, whereas size in September showed little relationship to marine survival. Specifically, fish that experienced the highest marine survivals were released before 25 May and were larger than 17 g (or 120 mm fork length) by July. Our findings highlight the importance of local conditions in Puget Sound (Washington, USA) during the spring and summer, and suggest that declines in marine survival since the 1980s may have been caused by reductions in the quality of feeding and growing conditions during early marine life.

  10. Effects of oil-contaminated prey on the feeding, growth, and related energetics on pink salmon, Oncorhynchus gorbuscha Walbaum, fry

    SciTech Connect

    Schwartz, J.P.

    1984-01-01

    Pink salmon, Oncorhynchus gorbuscha Walbaum, fry were exposed to oil contaminated prey (OCP) in a series of experiments to determine the effect of oil exposure via the diet on the ability of pink fry to survive. Brine shrimp, Artemia salina, nauplii were contaminated with petroleum hydrocarbons by exposure to the water-soluble fraction (WSF) of Cook Inlet crude oil and fed to the fish. Feeding rates were measured for 10 days using OCP and for 5 days using uncontaminated prey (post-exposure period). In a separate experiment, fry growth was measured over a 50 day period. In another experiment, fry oxygen consumption, food absorption and utilization, and ammonia excretion was measured to determine the effects of OCP on fry metabolic activity. Results indicate that exposure to OCP can reduce fry growth primarily by reducing food intake, but additional nutrition is lost from the non-absorption of ingested food. Reductions in growth could decrease fry survival, and thereby reduce the number of returning adult pink salmon.

  11. Rapid growth in the early marine period improves the marine survival of Chinook salmon (Oncorhynchus tshawytscha) in Puget Sound, Washington

    USGS Publications Warehouse

    Duffy, E.J.; Beauchamp, D.A.

    2011-01-01

    We examined the effect of early marine entry timing and body size on the marine (smolt-to-adult) survival of Puget Sound Chinook salmon (Oncorhynchus tshawytscha). We used data from coded wire tag release groups of hatchery Chinook salmon to test whether hatchery release date, release size, and size in offshore waters in July and September influenced marine survival. Marine survival was most strongly related to the average body size in July, with larger sizes associated with higher survivals. This relationship was consistent over multiple years (1997-2002), suggesting that mortality after July is strongly size-dependent. Release size and date only slightly improved this relationship, whereas size in September showed little relationship to marine survival. Specifically, fish that experienced the highest marine survivals were released before 25 May and were larger than 17 g (or 120 mm fork length) by July. Our findings highlight the importance of local conditions in Puget Sound (Washington, USA) during the spring and summer, and suggest that declines in marine survival since the 1980s may have been caused by reductions in the quality of feeding and growing conditions during early marine life.

  12. Factors influencing coastal cutthroat trout (Oncorhynchus clarkii clarkii) seasonal survival rates: A spatially continuous approach within stream networks

    USGS Publications Warehouse

    Berger, A.M.; Gresswell, R.E.

    2009-01-01

    Mark-recapture methods were used to examine watershed-scale survival of coastal cutthroat trout (Oncorhynchus clarkii clarkii) from two headwater stream networks. A total of 1725 individuals (???100 mm, fork length) were individually marked and monitored seasonally over a 3-year period. Differences in survival were compared among spatial (stream segment, subwatershed, and watershed) and temporal (season and year) analytical scales, and the effects of abiotic (discharge, temperature, and cover) and biotic (length, growth, condition, density, movement, and relative fish abundance) factors were evaluated. Seasonal survival was consistently lowest and least variable (years combined) during autumn (16 September - 15 December), and evidence suggested that survival was negatively associated with periods of low stream discharge. In addition, relatively low (-) and high (+) water temperatures, fish length (-), and boulder cover (+) were weakly associated with survival. Seasonal abiotic conditions affected the adult cutthroat trout population in these watersheds, and low-discharge periods (e.g., autumn) were annual survival bottlenecks. Results emphasize the importance of watershed-scale processes to the understanding of population-level survival.

  13. Theoretical life history responses of juvenile Oncorhynchus mykiss to changes in food availability using a dynamic state-dependent approach

    USGS Publications Warehouse

    Romine, Jason G.; Benjamin, Joseph R.; Perry, Russell W.; Casal, Lynne; Connolly, Patrick J.; Sauter, Sally S.

    2013-01-01

    Marine subsidies can play an important role in the growth, survival, and migratory behavior of rearing juvenile salmonids. Availability of high-energy, marine-derived food sources during critical decision windows may influence the timing of emigration or the decision to forego emigration completely and remain in the freshwater environment. Increasing growth and growth rate during these decision windows may result in an altered juvenile population structure, which will ultimately affect the adult population age-structure. We used a state dependent model to understand how the juvenile Oncorhynchus mykiss population structure may respond to increased availability of salmon eggs in their diet during critical decision windows. Our models predicted an increase in smolt production until coho salmon eggs comprised more than 50 percent of juvenile O. mykiss diet at the peak of the spawning run. At higher-than intermediate levels of egg consumption, smolt production decreased owing to increasing numbers of fish adopting a resident life-history strategy. Additionally, greater growth rates decreased the number of age-3 smolts and increased the number of age-2 smolts. Increased growth rates with higher egg consumption also decreased the age at which fish adopted the resident pathway. Our models suggest that the introduction of a high-energy food source during critical periods of the year could be sufficient to increase smolt production.

  14. Early marine growth in relation to marine-stage survival rates for Alaska sockeye salmon (Oncorhynchus nerka)

    USGS Publications Warehouse

    Farley, Edward V., Jr.; Murphy, J.M.; Adkison, M.D.; Eisner, L.B.; Helle, J.H.; Moss, J.H.; Nielsen, J.

    2007-01-01

    We tested the hypothesis that larger juvenile sockeye salmon (Oncorhynchus nerka) in Bristol Bay, Alaska, have higher marine-stage survival rates than smaller juvenile salmon. We used scales from returning adults (33 years of data) and trawl samples of juveniles (n = 3572) collected along the eastern Bering Sea shelf during August through September 2000-02. The size of juvenile sockeye salmon mirrored indices of their marine-stage survival rate (e.g., smaller fish had lower indices of marine-stage survival rate). However, there was no relationship between the size of sockeye salmon after their first year at sea, as estimated from archived scales, and brood-year survival size was relatively uniform over the time series, possibly indicating size-selective mortality on smaller individuals during their marine residence. Variation in size, relative abundance, and marine-stage survival rate of juvenile sockeye salmon is likely related to ocean conditions affecting their early marine migratory pathways along the eastern Bering Sea shelf.

  15. Hyporheic discharge of river water into fall chinook salmon (Oncorhynchus tshawytscha) spawning areas in the Hanford Reach, Columbia River

    SciTech Connect

    Geist, David R. )

    1999-12-01

    Fall chinook salmon (Oncorhynchus tshawytscha) spawned predominantly in areas of the Hanford Reach of the Columbia River where hyporheic water discharged into the river channel. This upwelling water had a dissolved solids content (i.e., specific conductance) indicative of river water and was presumed to have entered highly permeable riverbed substrate at locations upstream of the spawning areas. Hyporheic discharge zones composed of undiluted ground water or areas with little or no upwelling were not used by spawning salmon. Rates of upwelling into spawning areas averaged 1,200 L?m-2?day-1 (95% C.I.= 784 to 1,665 L?m-2?day-1) as compared to approximately 500 L?m-2?day-1 (95% C.I.= 303 to 1,159 L?m-2?day-1) in non-spawning areas. Dissolved oxygen content of the hyporheic discharge near salmon spawning areas was about 9 mg?L-1 (+ 0.4 mg?L-1) whereas in non-spawning areas dissolved oxygen values were 7 mg?L-1 (+ 0.9 mg?L-1) or lower. In both cases dissolved oxygen of the river water was higher (11.3+ 0.3 mg?L-1). Physical and chemical gradients between the hyporheic zone and the river may provide cues for adult salmon to locate suitable spawning areas. This information will help fisheries managers to describe the suitability of salmon spawning habitat in large rivers.

  16. Case report of an unusual heart abnormality in Rainbow trout (Oncorhynchus mykiss)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    An unusual heart abnormality in rainbow trout Oncorhynchus mykiss was recently observed. During the course of a standard hydrogen peroxide treatment (100 ppm) of production rainbow trout (mean weight, 2-3 g) affected with an external bacterial infection, a small percentage of fish exhibited morbidi...

  17. Effects of sex steroids on indices of protein turnover in rainbow trout (Oncorhynchus mykiss) white muscle

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Effects of 17-estradiol (E2), testosterone, and 5a-dihydrotestosterone (DHT) on protein turnover and proteolytic gene expression were determined in rainbow trout (Oncorhynchus mykiss) primary myocytes and white muscle tissue. E2 reduced rates of protein synthesis and increased rates of protein degr...

  18. Observations on side-swimming rainbow trout Oncorhynchus mykiss in water recirculation aquaculture systems

    Technology Transfer Automated Retrieval System (TEKTRAN)

    During a controlled 6-month study using six replicated water recirculation aquaculture systems (WRAS), it was observed that rainbow trout Oncorhynchus mykiss in all WRAS exhibited a higher-than-normal prevalence of side-swimming (i.e. controlled, forward swimming, but with misaligned orientation suc...

  19. Sensory analysis of rainbow trout, oncorhynchus mykiss, fed enriched black soldier fly prepupae, hermetia illucens

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A growth trial and fillet sensory analysis were conducted to examine the effects of replacing dietary fish meal with black soldier fly (BSF) prepupae, Hermetia illucens, in rainbow trout, Oncorhynchus mykiss. A practical-type trout diet was formulated to contain 45% protein; four test diets were dev...

  20. Mapping and expression of candidate genes for development rate in rainbow trout (Oncorhynchus mykiss)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Development rate has important implications for many aspects of an individual's biology. In rainbow trout (Oncorhynchus mykiss), a major QTL for embryonic development rate has been detected on chromosome 5, but at present, few candidate genes have been mapped to this region. This paucity of known ge...

  1. CHARACTERIZATION AND MAPPING OF NINETEEN POLYMORPHIC MICROSATELLITE MARKERS FOR RAINBOW TROUT (ONCORHYNCHUS MYKISS)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Nineteen new polymorphic microsatellite markers were developed for QTL mapping and population genetics studies in rainbow trout (Oncorhynchus mykiss). The amount of polymorphism, percent heterozygosity, ability of each marker to amplify genomic DNA from other salmonids and two point linkage data wer...

  2. Growth enhancement of rainbow trout (Oncorhynchus mykiss) by passive immunisation against somatostatin-14

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Juvenile rainbow trout (Oncorhynchus mykiss) were passively immunised against somatostatin-14 (SS-14) using an antibody originating from egg laying chicken (Gallus domesticus). Fish were immunised weekly (0, 7, 14, 21, 28, 35 d) with chicken egg yolk derived immunoglobulin (IgY) against SS-14 (1:25 ...

  3. Carnosine supplementation to an all-plant protein diet for rainbow trout (Oncorhynchus mykiss).

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Fishmeal may contain “unknown growth factors” that have yet to be identified for their physiological role. As fishmeal levels in rainbow trout (Oncorhynchus mykiss) feeds are reduced, the dietary loss of these compounds may contribute to growth reductions. One such compound, identified in fishmeal...

  4. MATERNAL TRANSFER OF BIOACTIVE POLYCHLORINATED AROMATIC HYDROCARBONS IN SPAWNING CHINOOK SALMON (ONCORHYNCHUS TSCHAWYTSCHA)

    EPA Science Inventory

    The biological potency (relative to 2,3,7,8-tetrachlorodibenzo-p-dioxin, TCDD) of planar polychlorinated aromatic hydrocarbons (PCHs) in extracts of eggs and flesh from spawning female chinook salmon (Oncorhynchus tschawytscha) from Lake Michigan was determined by measuring the i...

  5. Heritability of tolerance for infectious hematopoietic necrosis in sockeye salmon (Oncorhynchus nerka)

    USGS Publications Warehouse

    McIntyre, John D.; Amend, Donald F.

    1978-01-01

    A hierarchical breeding design was used to demonstrate the heritability of tolerance for infectious hematopoietic necrosis (IHN) in sockeye salmon. Oncorhynchus nerka. Heritability was about 30%, indicating that artificial selection may increase the number of fish that can tolerate the disease.

  6. Minthorn Springs Creek Summer Juvenile Release and Adult Collection Facility; 1992 Annual Report.

    SciTech Connect

    Rowan, Gerald D.

    1993-08-01

    The Confederated Tribes of the Umatilla Indian Reservation (CT'UIR) and Oregon Department of Fish and Wildlife (ODFW) are cooperating in a joint effort to supplement steelhead and re-establish salmon runs in the Umatilla River Basin. As an integral part of this program, Bonifer and Minthorn Acclimation Facilities are operated for holding and spawning adult steelhead and fall chinook salmon and acclimation and release of juvenile salmon and steelhead. Acclimation of 109,101 spring chinook salmon and 19,977 summer steelhead was completed at Bonifer in the spring of 1992. At Minthorn, 47,458 summer steelhead were acclimated and released. Control groups of spring chinook salmon were released instream concurrent with the acclimated releases to evaluate the effects of acclimation on adult returns to the Umatilla River. Acclimation studies with summer steelhead were not conducted in 1992. A total of 237 unmarked adult steelhead were collected for broodstock at Three Mile Dam from October 18, 1991 through April 24, 1992 and held at Minthorn. Utilizing a 3 x 3 spawning matrix, a total of 476,871 green eggs were taken from 86 females. The eggs were transferred to Umatilla Hatchery for incubation, rearing, and later release into the Umatilla River. A total of 211 fall chinook salmon were also collected for broodstock at Three Mile Dam and held at Minthorn. Using a 1:1 spawning ratio, a total of 195,637 green eggs were taken from 58 females. They were also transferred to Umatilla Hatchery for incubation, rearing, and later release into the Umatilla River. Personnel from the ODFW Eastern Oregon Fish Pathology Laboratory in La Grande took samples of tissues and reproductive fluids from Umatilla River summer steelhead and fall chinook salmon broodstock for monitoring and evaluation purposes. Cell culture assays for replicating agents, including IHNV virus, on all spawned fish were negative. One of 60 summer steelhead tested positive for EIBS virus, while all fall chinook tested

  7. A novel member of the family Hepeviridae from cutthroat trout (Oncorhynchus clarkii)

    USGS Publications Warehouse

    Batts, William; Yun, Susan; Hedrick, Ronald; Winton, James

    2011-01-01

    Beginning in 1988, the Chinook salmon embryo (CHSE-214) cell line was used to isolate a novel virus from spawning adult trout in the state of California, USA. Termed the cutthroat trout (Oncorhynchus clarkii) virus (CTV), the small, round virus was not associated with disease, but was subsequently found to be present in an increasing number of trout populations in the western USA, likely by a combination of improved surveillance activities and the shipment of infected eggs to new locations. Here, we report that the full length genome of the 1988 Heenan Lake isolate of CTV consisted of 7269 nucleotides of positive-sense, single-stranded RNA beginning with a 5' untranslated region (UTR), followed by three open reading frames (ORFs), a 3' UTR and ending in a polyA tail. The genome of CTV was similar in size and organization to that of Hepatitis E virus (HEV) with which it shared the highest nucleotide and amino acid sequence identities. Similar to the genomes of human, rodent or avian hepeviruses, ORF 1 encoded a large, non-structural polyprotein that included conserved methyltransferase, protease, helicase and polymerase domains, while ORF 2 encoded the structural capsid protein and ORF 3 the phosphoprotein. Together, our data indicated that CTV was clearly a member of the family Hepeviridae, although the level of amino acid sequence identity with the ORFs of mammalian or avian hepeviruses (13-27%) may be sufficiently low to warrant the creation of a novel genus. We also performed a phylogenetic analysis using a 262. nt region within ORF 1 for 63 isolates of CTV obtained from seven species of trout reared in various geographic locations in the western USA. While the sequences fell into two genetic clades, the overall nucleotide diversity was low (less than 8.4%) and many isolates differed by only 1-2 nucleotides, suggesting an epidemiological link. Finally, we showed that CTV was able to form persistently infected cultures of the CHSE-214 cell line that may have use

  8. Oxygen uptake in Pacific salmon Oncorhynchus spp.: when ecology and physiology meet.

    PubMed

    Eliason, E J; Farrell, A P

    2016-01-01

    Over the past several decades, a substantial amount of research has examined how cardiorespiratory physiology supports the diverse activities performed throughout the life cycle of Pacific salmon, genus Oncorhynchus. Pioneering experiments emphasized the importance of aerobic scope in setting the functional thermal tolerance for activity in fishes. Variation in routine metabolism can have important performance and fitness consequences as it is related to dominance, aggression, boldness, territoriality, growth rate, postprandial oxygen consumption, life history, season, time of day, availability of shelter and social interactions. Wild fishes must perform many activities simultaneously (e.g. swim, obtain prey, avoid predators, compete, digest and reproduce) and oxygen delivery is allocated among competing organ systems according to the capacity of the heart to deliver blood. For example, salmonids that are simultaneously swimming and digesting trade-off maximum swimming performance in order to support the oxygen demands of digestion. As adult Pacific salmonids cease feeding in the ocean prior to their home migration, endogenous energy reserves and cardiac capacity are primarily partitioned among the demands for swimming upriver, sexual maturation and spawning behaviours. Furthermore, the upriver spawning migration is under strong selection pressure, given that Pacific salmonids are semelparous (single opportunity to spawn). Consequently, these fishes optimize energy expenditures in a number of ways: strong homing, precise migration timing, choosing forward-assist current paths and exploiting the boundary layer to avoid the strong currents in the middle of the river, using energetically efficient swimming speeds, and recovering rapidly from anaerobic swimming. Upon arrival at the spawning ground, remaining energy can be strategically allocated to the various spawning behaviours. Strong fidelity to natal streams has resulted in reproductively isolated populations that

  9. Dermal absorption of three waterborne chloroethanes in rainbow trout (Oncorhynchus mykiss) and channel catfish (Ictalurus punctatus).

    PubMed

    McKim, J M; Nichols, J W; Lien, G J; Hoffman, A D; Gallinat, C A; Stokes, G N

    1996-06-01

    In vivo estimates of xenobiotic chemical flux across the dermal surface of intact fish were obtained by measuring chemical loss from venous blood to expired water. An experimental system was developed to separate the dermal route of exposure from all other routes. The system was then used to measure dermal absorption of tetrachloroethane (TCE), pentachloroethane (PCE), and hexachloroethane (HCE) in channel catfish (Ictalurus punctatus) and rainbow trout (Oncorhynchus mykiss), two fish with very different skin anatomies. The kinetics of accumulation varied among chemicals, but for each compound were similar among species. TCE accumulated rapidly, reaching steady state in blood within 48 hr. Steady state was not reached in 48 hr with PCE or HCE, although blood levels of PCE were probably close to steady-state values. Dermal flux estimates (based on branchial efflux) for TCE, PCE, and HCE were two to four times greater in catfish than in trout. Arterial blood concentrations of each compound were three to six times greater in catfish. These observations are indicative of greater flux across catfish skin, augmented by higher blood:water chemical partitioning. Trout skin is covered with scales and has no taste buds, while catfish skin does not possess scales and has numerous taste bud papillae. Both scales and taste bud papillae originate in the dermis and extend to the skin surface through the epidermis. In catfish these taste buds may offer channels through which chemicals diffuse across the epidermis to the more vascularized dermis. A comparison of dermal and branchial uptake was made by estimating zero-time dermal and branchial fluxes for all three chloroethanes. The mean dermal fluxes for TCE, PCE, and HCE ranged from 1.4 to 2.8, 1.8 to 3.6, and 1.4 to 3.2% of the total flux (branchial plus dermal) in rainbow trout and channel catfish, respectively. This research demonstrates that dermal absorption of waterborne chemicals occurs in large adult fish and results in

  10. Muscle wound healing in rainbow trout (Oncorhynchus mykiss).

    PubMed

    Schmidt, J G; Andersen, E W; Ersbøll, B K; Nielsen, M E

    2016-01-01

    We followed the progression of healing of deep excisional biopsy punch wounds over the course of 365 days in rainbow trout (Oncorhynchus mykiss) by monitoring visual wound healing and gene expression in the healing muscle at regular intervals (1, 3, 7, 14, 38 and 100 days post-wounding). In addition, we performed muscle texture analysis one year after wound infliction. The selected genes have all previously been investigated in relation to vertebrate wound healing, but only few specifically in fish. The selected genes were interleukin (IL)-1β, IL-6, transforming growth factor (TGF)-β1 and -β3, matrix metalloproteinase (MMP) -9 and -13, inducible nitric oxide synthase (iNOS), fibronectin (FN), tenascin-C (TN-C), prolyl 4-hydroxylase α1-chain (P4Hα1), lysyl oxidase (LOX), collagen type I α1-chain (ColIα1), CD41 and CD163. Wound healing progressed slowly in the presented study, which is at least partially due to the low temperature of about 8.5 °C during the first 100 days. The inflammation phase lasted more than 14 days, and the genes relating to production and remodeling of new extracellular matrix (ECM) exhibited a delayed but prolonged upregulation starting 1-2 weeks post-wounding and lasting until at least 100 days post-wounding. The gene expression patterns and histology reveal limited capacity for muscle regeneration in rainbow trout, and muscle texture analyses one year after wound infliction confirm that wounds heal with fibrosis. At 100 dpw epidermis had fully regenerated, and dermis partially regenerated. Scales had not regenerated even after one year. CD163 is a marker of "wound healing"-type M2c macrophages in mammals. M2 macrophage markers are as yet poorly described in fish. The pattern of CD163 expression in the present study is consistent with the expected timing of presence of M2c macrophages in the wound. CD163 may thus potentially prove a valuable marker of M2 macrophages - or a subset hereof - in fish. We subjected a group of fish to

  11. Shedding of Renibacterium salmoninarum by infected chinook salmon Oncorhynchus tschawytscha

    USGS Publications Warehouse

    McKibben, C.L.; Pascho, R.J.

    1999-01-01

    Laboratory studies of the transmission and pathogenesis of Renibacterium salmoninarum may describe more accurately what is occurring in the natural environment if test fish are infected by waterborne R. salmoninarum shed from infected fish. To quantify bacterial shedding by chinook salmon Oncorhynchus tschawytscha at 13??C in freshwater, groups of fish were injected intraperitoneally with R. salmoninarum at either 1.3 x 106 colony forming units (CFU) fish-1 (high-dose injection group) or 1.5 x 103 CFU fish-1 (low-dose injection group). R. salmoninarum infection levels were measured in the exposed fish by the enzyme-linked immunosorbent assay (BKD-ELISA). At regular intervals for 30 d, the numbers of R. salmoninarum shed by the injected fish were calculated on the basis of testing water samples by the membrane filtration-fluorescent antibody test (MF-FAT) and bacteriological culture. Mean BKD-ELISA optical densities (ODs) for fish in the low-dose injection group were not different from those of control fish [p > 0.05), and no R. salmoninarum were detected in water samples taken up to 30 d after injection of fish in the low-dose group. By 12 d after injection a proportion of the fish from the high-dose infection group had high (BKD-ELISA OD ??? 1.000) to severe (BKD-ELISA OD ??? 2.000) R. salmoninarum infection levels, and bacteria were detected in the water by both tests. However, measurable levels of R. salmoninarum were not consistently detected in the water until a proportion of the fish maintained high to severe infection levels for an additional 8 d. The concentrations of R salmoninarum in the water samples ranged from undetectable up to 994 cells ml-1 on the basis of the MF-FAT, and up to 1850 CFU ml-1 on the basis of bacteriological culture. The results suggest that chinook salmon infected with R. salmoninarum by injection of approximately 1 x 106 CFU fish-1 can be used as the source of infection in cohabitation challenges beginning 20 darter injection.

  12. Shedding of Renibacterium salmoninarum by infected chinook salmon Oncorhynchus tschawytscha.

    PubMed

    McKibben, C L; Pascho, R J

    1999-10-11

    Laboratory studies of the transmission and pathogenesis of Renibacterium salmoninarum may describe more accurately what is occurring in the natural environment if test fish are infected by waterborne R. salmoninarum shed from infected fish. To quantify bacterial shedding by chinook salmon Oncorhynchus tschawytscha at 13 degrees C in freshwater, groups of fish were injected intraperitoneally with R. salmoninarum at either 1.3 x 10(6) colony forming units (CFU) fish (-1) (high-dose injection group) or 1.5 x 10(3) CFU fish (-1) (low-dose injection group). R. salmoninarum infection levels were measured in the exposed fish by the enzyme-linked immunosorbent assay (BKD-ELISA). At regular intervals for 30 d, the numbers of R. salmoninarum shed by the injected fish were calculated on the basis of testing water samples by the membrane filtration-fluorescent antibody test (MF-FAT) and bacteriological culture. Mean BKD-ELISA optical densities (ODs) for fish in the low-dose injection group were not different from those control fish (p > 0.05), and no R. salmoninarum were detected in water samples taken up to 30 d after injection of fish in the low-dose group. By 12 d after injection a proportion of the fish from the high-dose infection group had high (BKD-ELISA OD > or = 1.000) to severe (BKD-ELISA OD > or = 2.000) R. salmoninarum infection levels, and bacteria were detected in the water by both tests. However, measurable levels of R. salmoninarum were not consistently detected in the water until a proportion of the fish maintained high to severe infection levels for an additional 8 d. The concentrations of R. salmoninarum in the water samples ranged from undetectable up to 994 cells ml(-1) on the basis of the MF-FAT, and up to 1850 CFU ml(-1) on the basis of bacteriological culture. The results suggest that chinook salmon infected with R. salmoninarum by injection of approximately 1 x 10(6) CFU fish (-1) can be used as the source of infection in cohabitation challenges

  13. Evaluation of Steelhead Kelt Passage into the Bonneville Dam Second Powerhouse Corner Collector Prior to the Juvenile Migration Seasons, 2007 and 2008

    SciTech Connect

    Weiland, Mark A.; Kim, Jina; Nagy, William T.; Johnson, Gary E.

    2009-09-01

    This report documents the results of a steelhead kelt passage study conducted by the PNNL for the U.S. Army Corps of Engineers at Bonneville Dam in early spring 2007 and 2008. At the Second Powerhouse, a surface flow outlet called the corner collector (B2CC) may be an effective non-turbine passage route for steelhead kelt moving downstream in early spring before the main juvenile emigration season. The goal of this project was to inform management decisions regarding B2CC operations by estimating the number of kelt using the B2CC for downstream passage at Bonneville Dam prior to the juvenile spring migration season. We performed a hydroacoustic study from March 2 to April 10, 2007 and from March 13 to April 15, 2008.

  14. 76 FR 27017 - Endangered and Threatened Species; Take of Anadromous Fish

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-05-10

    .... The study's additional goals are to define what life history strategies are present in these areas and... notice: Chinook salmon (Oncorhynchus tshawytscha): threatened Puget Sound (PS). Steelhead (O....

  15. New insights into the nutritional regulation of gluconeogenesis in carnivorous rainbow trout (Oncorhynchus mykiss): a gene duplication trail.

    PubMed

    Marandel, Lucie; Seiliez, Iban; Véron, Vincent; Skiba-Cassy, Sandrine; Panserat, Stéphane

    2015-07-01

    The rainbow trout (Oncorhynchus mykiss) is considered to be a strictly carnivorous fish species that is metabolically adapted for high catabolism of proteins and low utilization of dietary carbohydrates. This species consequently has a "glucose-intolerant" phenotype manifested by persistent hyperglycemia when fed a high-carbohydrate diet. Gluconeogenesis in adult fish is also poorly, if ever, regulated by carbohydrates, suggesting that this metabolic pathway is involved in this specific phenotype. In this study, we hypothesized that the fate of duplicated genes after the salmonid-specific 4th whole genome duplication (Ss4R) may have led to adaptive innovation and that their study might provide new elements to enhance our understanding of gluconeogenesis and poor dietary carbohydrate use in this species. Our evolutionary analysis of gluconeogenic genes revealed that pck1, pck2, fbp1a, and g6pca were retained as singletons after Ss4r, while g6pcb1, g6pcb2, and fbp1b ohnolog pairs were maintained. For all genes, duplication may have led to sub- or neofunctionalization. Expression profiles suggest that the gluconeogenesis pathway remained active in trout fed a no-carbohydrate diet. When trout were fed a high-carbohydrate diet (30%), most of the gluconeogenic genes were non- or downregulated, except for g6pbc2 ohnologs, whose RNA levels were surprisingly increased. This study demonstrates that Ss4R in trout involved adaptive innovation via gene duplication and via the outcome of the resulting ohnologs. Indeed, maintenance of ohnologous g6pcb2 pair may contribute in a significant way to the glucose-intolerant phenotype of trout and may partially explain its poor use of dietary carbohydrates. PMID:25901068

  16. Survey of parasites in threatened stocks of coho salmon (Oncorhynchus kisutch) in Oregon by examination of wet tissues and histology.

    PubMed

    Ferguson, Jayde A; St-Hilaire, Sophie; Peterson, Tracy S; Rodnick, Kenneth J; Kent, Michael L

    2011-12-01

    We are conducting studies on the impacts of parasites on Oregon coastal coho salmon (Oncorhynchus kistuch). An essential first step is documenting the geographic distribution of infections, which may be accomplished by using different methods for parasite detection. Thus, the objectives of the current study were to (1) identify parasite species infecting these stocks of coho salmon and document their prevalence, density, and geographic distribution; (2) assess the pathology of these infections; and (3) for the first time, determine the sensitivity and specificity of histology for detecting parasites compared with examining wet preparations for muscle and gill infections. We examined 576 fry, parr, and smolt coho salmon in total by histology. The muscle and gills of 219 of these fish also were examined by wet preparation. Fish were collected from 10 different locations in 2006-2007. We identified 21 different species of parasites in these fish. Some parasites, such as Nanophyetus salmincola and Myxobolus insidiosus, were common across all fish life stages from most basins. Other parasites, such as Apophallus sp., were more common in underyearling fish than smolts and had a more restricted geographic distribution. Additional parasites commonly observed were as follows: Sanguinicola sp., Trichodina truttae , Epistylis sp., Capriniana piscium, and unidentified metacercariae in gills; Myxobolus sp. in brain; Myxidium salvelini and Chloromyxum majori in kidney; Pseudocapillaria salvelini and adult digenean spp. in the intestine. Only a few parasites, such as the unidentified gill metacercariae, elicted overt pathologic changes. Histology had generally poor sensitivity for detecting parasites; however, it had relatively good specificity. We recommend using both methods for studies or monitoring programs requiring a comprehensive assessment of parasite identification, enumeration, and parasite-related pathology. PMID:21668345

  17. A latitudinal cline in the Chinook salmon (Oncorhynchus tshawytscha) Clock gene: evidence for selection on PolyQ length variants

    PubMed Central

    O'Malley, Kathleen G; Banks, Michael A

    2008-01-01

    A critical seasonal event for anadromous Chinook salmon (Oncorhynchus tshawytscha) is the time at which adults migrate from the ocean to breed in freshwater. We investigated whether allelic variation at the circadian rhythm genes, OtsClock1a and OtsClock1b, underlies genetic control of migration timing among 42 populations in North America. We identified eight length variants of the functionally important polyglutamine repeat motif (PolyQ) of OtsClock1b while OtsClock1a PolyQ was highly conserved. We found evidence of a latitudinal cline in average allele length and frequency of the two most common OtsClock1b alleles. The shorter 335 bp allele increases in frequency with decreasing latitude while the longer 359 bp allele increases in frequency at higher latitudes. Comparison to 13 microsatellite loci showed that 335 and 359 bp deviate significantly from neutral expectations. Furthermore, a hierarchical gene diversity analysis based on OtsClock1b PolyQ variation revealed that run timing explains 40.9 per cent of the overall genetic variance among populations. By contrast, an analysis based on 13 microsatellite loci showed that run timing explains only 13.2 per cent of the overall genetic variance. Our findings suggest that length polymorphisms in OtsClock1b PolyQ may be maintained by selection and reflect an adaptation to ecological factors correlated with latitude, such as the seasonally changing day length. PMID:18713722

  18. Molecular cloning and functional characterization of two forms of Pax8 in the rainbow trout, Oncorhynchus mykiss

    PubMed Central

    Katagiri, Nobuto; Uemae, Youji; Sakamoto, Joe; Hidaka, Yoshie; Susa, Takao; Kato, Yukio; Kimura, Shioko; Suzuki, Masakazu

    2014-01-01

    We have identified two distinct Pax8 (a and b) mRNAs from the thyroid gland of the rainbow trout (Oncorhynchus mykiss), which seemed to be generated by alternative splicing. Both Pax8a and Pax8b proteins were predicted to possess the paired domain, octapeptide, and partial homeodomain, while Pax8b lacked the carboxy-terminal portion due to an insertion in the coding region of the mRNA. RT-PCR analysis showed each of Pax8a and Pax8b mRNAs to be abundantly expressed in the thyroid and kidney. In situ hybridization histochemistry further detected the expression of Pax8 mRNA in the epithelial cells of the thyroid follicles of the adult trout and in the thyroid primordial cells of the embryo. The functional properties of Pax8a and Pax8b were investigated by dual luciferase assay. The transcriptional regulation by the rat thyroid peroxidase (TPO) promoter was found to be increased by Pax8a, but not by Pax8b. Pax8a further showed synergistic transcriptional activity with rat Nkx2-1 for the human TPO upstream region including the enhancer and promoter. On the other hand, Pax8b decreased the synergistic activity of Pax8a and Nkx2-1. Electrophoretic mobility shift assay additionally indicated that not only Pax8a but also Pax8b can bind to the TPO promoter and enhancer, implying that the inhibitory effect of Pax8b might result from the lack of the functional carboxy-terminal portion. Collectively, the results suggest that for the trout thyroid gland, Pax8a may directly increase TPO gene expression in cooperation with Nkx2-1 while Pax8b may work as a non-activating competitor for the TPO transcription. PMID:24380675

  19. Monitoring of Downstream Salmon and Steelhead at Federal Hydroelectric Facilities, 1996 Annual Report.

    SciTech Connect

    Martinson, Rick D.; Kamps, Jeffrey W.; Graves, Ritchie J.

    1997-08-01

    The seaward migration of juvenile salmonids was monitored by the National Marine Fisheries Service (NMFS) at Bonneville and John Day Dams on the Columbia River in 1996 The NMFS Smolt Monitoring Project is part of a larger Smolt Monitoring Program (SMP) coordinated by the Fish Passage Center (FPC) for the Columbia Basin Fish and Wildlife Authority. The purpose of the SMP is to monitor the migration of the juvenile salmonid stocks in the Columbia basin and make flow and spill recommendations designed to facilitate fish passage. Data are also used for travel time, migration timing, and relative run size analysis. The purpose of the NMFS portion of the program is to provide the FPC with species and project specific real time data from John Day and Bonneville Dams. Monitoring data collected included: river conditions; total numbers of fish; numbers of fry, adult salmon, and incidental catch; daily and seasonal passage patterns; and fish condition. 10 refs., 16 figs., 5 tabs.

  20. Changes in Habitat and Populations of Steelhead Trout, Coho Salmon, and Chinook Salmon in Fish Creek, Oregon; Habitat Improvement, 1983-1987 Final Report.

    SciTech Connect

    Everest, Fred H.; Hohler, David B.; Cain, Thomas C.

    1988-03-01

    Construction and evaluation of salmonid habitat improvements on Fish Creek, a tributary of the upper Clackamas River, began in 1982 as a cooperative venture between the Estacada Ranger District, Mt. Hood National Forest, and the Anadromous Fish Habitat Research Unit of the Pacific Northwest Research Station (PNW), USDA Forest Service. The project was initially conceived as a 5-year effort (1982-1987) to be financed with Forest Service funds. The habitat improvement program and the evaluation of improvements were both expanded in mid-1983 when the Bonneville Power Administration (BPA) entered into an agreement with the Mt. Hood National Forest to cooperatively fund work on Fish Creek. Habitat improvement work in the basin is guided by the Fish Creek Habitat Rehabilitation-Enhancement Framework developed cooperatively by the Estacada Ranger District, the Oregon Department of Fish and Wildlife, and the Pacific Northwest Research Station. The framework examines potential factors limiting production of salmonids in the basin, and the appropriate habitat improvement measures needed to address the limiting factors. Habitat improvement work in the basin has been designed to: (1) improve quantity, quality, and distribution of spawning habitat for coho and spring chinook salmon and steelhead trout, (2) increase low flow rearing habitat for steelhead trout and coho salmon, (3) improve overwintering habitat for coho salmon and steelhead trout, (4) rehabilitate riparian vegetation to improve stream shading to benefit all species, and (5) evaluate improvement projects from a drainage wide perspective. The objectives of the evaluation include: (1) Drainage-wide evaluation and quantification of changes in salmonid spawning and rearing habitat resulting from a variety of habitat improvements. (2) Evaluation and quantification of changes in fish populations and biomass resulting from habitat improvements. (3) Benefit-cost analysis of habitat improvements.

  1. Quantifying the net benefit impacts of the Troy Waste Water Treatment Plant on Steelhead Habitat in the West Fork Little Bear Creek drainage

    NASA Astrophysics Data System (ADS)

    Sanchez-Murillo, R.; Brooks, E. S.; Boll, J.

    2010-12-01

    Discharge of waste water treatment plants (WWTPs) typically is viewed to result in water quality impairment. However, WWTPs can also be a source of nutrients to enhance the salmonid food web as well as an efficient way to maintain acceptable water temperature regimes and flow conditions during summer. We observed this paradox in West Fork Little Bear Creek (WFLB) in the City of Troy, Idaho. Despite the nutrient load, the WFLB had the highest Steelhead trout density in the watershed, with a mean density of 13.2 fish/100 m2. The objective of this project was to utilize a water quality model, QUAL2kw, and an ecology assessment to examine how the nutrient load from the WWTP affects: a) habitat conditions for steelhead juveniles, and b) physic-chemical parameters. Four monitoring stations were installed from May through November in 2009 and 2010. An undisturbed creek was used as a control site in 2010. Dissolved oxygen (DO), electrical conductivity, temperature, and discharge were measured continuously at each monitoring station. Weekly samples were collected at each monitoring station and analyzed for nitrate, nitrite, ammonia, total Kjeldahl nitrogen, total phosphorous, and orthophosphates. In 2010, Chlorophyll a was analyzed weekly, while bottom algae biomass was determined monthly. Results show that during summer months, the WWTP provides the majority of the flow (0.1 cfs) in the creek. Water samples and DO measurements taken 200 m downstream of the plant during late summer months indicate that nitrification process leads to low DO level well below the state standard of 6 mg/L for cold water biota. However dissolved oxygen levels recover within 1 km downstream. Discharge data suggest that without the flow from the treatment most of the creek would dry during late summer months. Abundance of macroinverbrates, high primary productivity, and sustained flow during summer suggests that the effluent from the WWTP is a net benefit to the Steelhead habitat in the basin

  2. Evaluation of Juvenile Fish Bypass and Adult Fish Passage Facilities at Water Diversions in the Umatilla River; 1993 Annual Report.

    SciTech Connect

    Knapp, Suzanne M.

    1994-03-01

    This report presents progress from October 1992 through September 1993 in evaluating juvenile fish bypass facilities at Three Mile Falls, Maxwell, Westland, and Feed Canal dams on the Umatilla River, and in evaluating adult fish passage in the lower Umatilla River. Also reported is an effort to evaluate delayed mortality and stress responses of juvenile salmonids resulting from trapping and transport at high temperatures. These studies are part of a program to rehabilitate anadromous fish stocks in the matilla River Basin, including restoration of coho salmon and chinook salmon, as well as enhancement of summer steelhead.

  3. Microsomal biotransformation of chlorpyrifos, parathion and fenthion in rainbow trout (Oncorhynchus mykiss) and coho salmon (Oncorhynchus kisutch): mechanistic insights into interspecific differences in toxicity.

    PubMed

    Lavado, Ramon; Schlenk, Daniel

    2011-01-17

    Rainbow trout often serve as a surrogate species evaluating xenobiotic toxicity in cold-water species including other salmonids of the same genus, which are listed as threatened or endangered. Biotransformation tends to show species-specific patterns that influence susceptibility to xenobiotic toxicity, particularly organophosphate insecticides (OPs). To evaluate the contribution of biotransformation in the mechanism of toxicity of three organophosphate (phosphorothionate) insecticides, (chlorpyrifos, parathion and fenthion), microsomal bioactivation and detoxification pathways were measured in gills, liver and olfactory tissues in juvenile rainbow trout (Oncorhynchus mykiss) and compared to juvenile coho salmon (Oncorhynchus kisutch). Consistent with species differences in acute toxicity, significantly higher chlorpyrifos bioactivation was found in liver microsomes of rainbow trout (up to 2-fold) when compared with coho salmon. Although bioactivation to the oxon was observed, the catalytic efficiency towards chlorpyrifos dearylation (detoxification) was significantly higher in liver for both species (1.82 and 0.79 for trout and salmon, respectively) when compared to desulfuration (bioactivation). Bioactivation of parathion to paraoxon was significantly higher (up to 2.2-fold) than detoxification to p-nitrophenol in all tissues of both species with rates of conversion in rainbow trout, again significantly higher than coho salmon. Production of fenoxon and fenthion sulfoxides from fenthion was detected only in liver and gills of both species with activities in rainbow trout significantly higher than coho salmon. NADPH-dependent cleavage of fenthion was observed in all tissues, and was the only activity detected in olfactory tissues. These results indicate rainbow trout are more sensitive than coho salmon to the acute toxicity of OP pesticides because trout have higher catalytic rates of oxon formation. Thus, rainbow trout may serve as a conservative surrogate

  4. Salmonid Gamete Preservation in the Snake River Basin, 1998 Annual Report.

    SciTech Connect

    Armstrong, Robyn; Kucera, Paul A.

    1999-03-01

    Steelhead (Oncorhynchus mykiss) and salmon (Oncorhynchus tshawytscha)populations in the Northwest are decreasing. The Nez Perce Tribe (Tribe) was funded in 1998 by the Bonneville Power Administration to coordinate gene banking of male gametes from Endangered Species Act (ESA) listed steelhead and spring and summer chinook salmon in the Snake River basin.

  5. Open-jaw syndrome in chinook salmon (Oncorhynchus tshawytscha) at a hatchery

    USGS Publications Warehouse

    Crouch, Dennis E.; Yasutake, William T.; Rucker, Robert R.

    1973-01-01

    Nearly 0.5% of the yearling spring chinook salmon (Oncorhynchus tshawytscha) at a national fish hatchery were observed with mouth agape, the condition occurring in two of 16 ponds. X-radiographs and histological preparations indicated that the articular bone of the lower jaw was malformed and dislocated dorsal and posterior to its normal point of attachment. The bone appeared to be embedded in the mandibular muscle and surrounded by an extensive fibrous tissue network. Genetic aberration, environmental interaction, and teratogenic substances are discussed as possible causes of the anomaly.

  6. Histopathological findings in farmed rainbow trout (Oncorhynchus mykiss) naturally infected with 3 different Aeromonas species.

    PubMed

    Zepeda-Velázquez, Andrea Paloma; Vega-Sánchez, Vicente; Salgado-Miranda, Celene; Soriano-Vargas, Edgardo

    2015-07-01

    This study describes the macroscopic and microscopic lesions in farmed rainbow trout (Oncorhynchus mykiss) naturally infected with genetically identified Aeromonas salmonicida, A. hydrophila, and A. veronii species. The genus Aeromonas includes bacteria that naturally inhabit both waterways and organisms. At least 27 Aeromonas species have been identified to date, some of which can cause significant economic losses in aquaculture. As up to 68.8% of Aeromonas isolates may be misidentified in routine biochemical and phenotypic tests, however, reported cases of Aeromonas infection in fish may be wrongly identified. Our findings confirmed that the 3 Aeromonas species studied are associated with septicemia and dermal lesions in rainbow trout. PMID:26130859

  7. Histopathological findings in farmed rainbow trout (Oncorhynchus mykiss) naturally infected with 3 different Aeromonas species

    PubMed Central

    Zepeda-Velázquez, Andrea Paloma; Vega-Sánchez, Vicente; Salgado-Miranda, Celene; Soriano-Vargas, Edgardo

    2015-01-01

    This study describes the macroscopic and microscopic lesions in farmed rainbow trout (Oncorhynchus mykiss) naturally infected with genetically identified Aeromonas salmonicida, A. hydrophila, and A. veronii species. The genus Aeromonas includes bacteria that naturally inhabit both waterways and organisms. At least 27 Aeromonas species have been identified to date, some of which can cause significant economic losses in aquaculture. As up to 68.8% of Aeromonas isolates may be misidentified in routine biochemical and phenotypic tests, however, reported cases of Aeromonas infection in fish may be wrongly identified. Our findings confirmed that the 3 Aeromonas species studied are associated with septicemia and dermal lesions in rainbow trout. PMID:26130859

  8. Ibuprofen metabolism in the liver and gill of rainbow trout, Oncorhynchus mykiss.

    PubMed

    Gomez, C F; Constantine, L; Moen, M; Vaz, A; Wang, W; Huggett, Duane B

    2011-03-01

    The presence of pharmaceuticals in the environment has become an important topic of discussion with respect to pharmaceutical absorption, metabolism and elimination in fish. This study investigates the metabolism of ibuprofen by rainbow trout (Oncorhynchus mykiss). In vitro metabolic loss of parent compound was measured in gill and liver S9 and microsomal fractions. Metabolite analysis found 2-hydroxy-ibuprofen as the major metabolite in uninduced S9 fractions. Supplementing S9 fractions with UDPGA did not significantly enhance metabolism. Additionally, assays involving the induction and inhibition of specific CYP isozymes support CYP1A2 as a possible metabolic pathway in fish. PMID:21301807

  9. Hood River and Pelton Ladder Evaluation Studies and Hood River Fish Habitat Project, 1998 Annual Progress Report.

    SciTech Connect

    Lambert, Michael B.; McCanna, Joseph P.; Jennings, Mick

    1999-12-01

    The Hood River subbasin is home to four species of anadromous salmonids: chinook salmon (Oncorhynchus tshawytscha), coho salmon (Oncorhynchus kisutch), steelhead (Oncorhynchus mykiss), and sea run cutthroat trout (Salmo clarki). Indigenous spring chinook salmon were extirpated during the late 1960's. The naturally spawning spring chinook salmon currently present in the subbasin are progeny of Deschutes stock. Historically, the Hood River subbasin hatchery steelhead program utilized out-of-basin stocks for many years. Indigenous stocks of summer and winter steelhead were listed in March 1998 by National Marine Fisheries Service (NMFS) under the Endangered Species Act (ESA) as a ''Threatened'' Species along with similar genetically similar steelhead in the Lower Columbia Basin.

  10. Feasibility of Documenting and Estimating Adult Fish Passage at Large Hydroelectric Facilities in the Snake River Using Video Technology; 1992 Annual Report.

    SciTech Connect

    Hatch, Douglas R.; Pederson, David R.; Schartzberg, Mathew

    1993-03-01

    A field study was conducted at Lower Granite Dam on the Snake River in 1992 to evaluate the feasibility of using time-lapse video technology to document and estimate fish ladder passage of chinook salmon Oncorhynchus tshawytscha, sockeye salmon 0. nerka, and steelhead 0. mykiss using time-lapse video technology. High quality video images were produced with a time-lapse video system operating in 72 h mode from 1 May through 31 December, 1992 and fish were counted from 1 June through 15 December. From the video record we counted 15 sockeye salmon, 3,283 summer chinook salmon, 1,022 fall chinook salmon, and 125,599 steelhead. The composite count of target species generated from the video record was similar (p = 0.617) to the estimate made by on-site counters during identical time periods indicating that the two methods were precise. Comparisons of 24 h video counts and on-site (10 and 16 h) counts showed that a significant (p < 0.001) proportion of target salmonids migrated during the nighttime when on-site counts are not typically made at Lower Granite Dam. The mean sockeye salmon fork length measured from video images was 453 mm. Mean fork-lengths reported for Snake River sockeye salmon between 1953 and 1965 were much greater ({female} = 546 mm {male} = 577 mm). Cost comparisons showed that video costs were less than half those of on-site counting methods. The video method also included the collection of additional data. A computer software demonstration program was developed that graphically illustrated the possibilities of a completely automated, computerized fish counting and identification system.

  11. Emigration of Natural and Hatchery Chinook Salmon and Steelhead Smolts from the Imnaha River, Oregon, October 20, 1999 to June 15, 2000 : 2000 Annual Report.

    SciTech Connect

    Cleary, Peter J.

    2002-12-01

    This report details the smolt performance of natural and hatchery chinook salmon and steelhead from the Imnaha River to the Snake River and Columbia River dams during migration year 2000. Flow conditions in the Imnaha River and Snake River were appreciably lower during May and June in 2000, compared to historic levels at gauging stations, but flow conditions in the Imnaha and Snake River were above average during April. Overall, water conditions for the entire Columbia River were characterized by the Fish Passage Center as below normal levels. Spill occurred continuously at Lower Granite Dam (LGR), Little Goose Dam (LGO), and Lower Monumental Dam (LMO) from April 5, April 10, and April 4, respectively, to June 20, and encompassed the periods of migration of Imnaha River juvenile chinook salmon and steelhead, with a few exceptions. Outflow in the tailraces of LGR, LGO, and LMO decreased in May and June while temperatures increased. Chinook salmon and steelhead were captured using rotary screw traps at river kilometer (rkm) 74 and 7 during the fall from October 20 to November 24, 1999, and during the spring period from February 26 to June 15, 2000, at rkm 7. Spring trapping information was reported weekly to the Fish Passage Center's Smolt Monitoring Program. A portion of these fish were tagged weekly with passive integrated transponder (PIT) tags and were detected migrating past interrogation sites at Snake River and Columbia River dams. Survival of PIT tagged fish was estimated with the Survival Using Proportional Hazards model (SURPH model). Estimated survival of fall tagged natural chinook (with {+-} 95% confidence intervals in parenthesis) from the upper Imnaha (rkm 74) to LGR was 29.6% ({+-} 2.8 ). Natural chinook salmon tagged in the fall in the lower Imnaha River at rkm 7, which over wintered in the Snake River, had an estimated survival of 36.8% ({+-} 2.9%) to LGR. Spring tagged natural chinook salmon from the lower site had an estimated survival of 84

  12. Broadband analysis of landslides seismic signal : example of the Oso-Steelhead landslide and other recent events

    NASA Astrophysics Data System (ADS)

    Hibert, C.; Stark, C. P.; Ekstrom, G.

    2014-12-01

    Landslide failures on the scale of mountains are spectacular, dangerous, and spontaneous, making direct observations hard to obtain. Measurement of their dynamic properties during runout is a high research priority, but a logistical and technical challenge. Seismology has begun to help in several important ways. Taking advantage of broadband seismic stations, recent advances now allow: (i) the seismic detection and location of large landslides in near-real-time, even for events in very remote areas that may have remain undetected, such as the 2014 Mt La Perouse supraglacial failure in Alaska; (ii) inversion of long-period waves generated by large landslides to yield an estimate of the forces imparted by the bulk accelerating mass; (iii) inference of the landslide mass, its center-of-mass velocity over time, and its trajectory.Key questions persist, such as: What can the short-period seismic data tell us about the high-frequency impacts taking place within the granular flow and along its boundaries with the underlying bedrock? And how does this seismicity relate to the bulk acceleration of the landslide and the long-period seismicity generated by it?Our recent work on the joint analysis of short- and long-period seismic signals generated by past and recent events, such as the Bingham Canyon Mine and the Oso-Steelhead landslides, provides new insights to tackle these issues. Qualitative comparison between short-period signal features and kinematic parameters inferred from long-period surface wave inversion helps to refine interpretation of the source dynamics and to understand the different mechanisms for the origin of the short-period wave radiation. Our new results also suggest that quantitative relationships can be derived from this joint analysis, in particular between the short-period seismic signal envelope and the inferred momentum of the center-of-mass. In the future, these quantitative relationships may help to constrain and calibrate parameters used in

  13. Comparative mapping reveals quantitative trait loci that affect spawning time in coho salmon (Oncorhynchus kisutch)

    PubMed Central

    Araneda, Cristian; Díaz, Nelson F.; Gomez, Gilda; López, María Eugenia; Iturra, Patricia

    2012-01-01

    Spawning time in salmonids is a sex-limited quantitative trait that can be modified by selection. In rainbow trout (Oncorhynchus mykiss), various quantitative trait loci (QTL) that affect the expression of this trait have been discovered. In this study, we describe four microsatellite loci associated with two possible spawning time QTL regions in coho salmon (Oncorhynchus kisutch). The four loci were identified in females from two populations (early and late spawners) produced by divergent selection from the same base population. Three of the loci (OmyFGT34TUF, One2ASC and One19ASC) that were strongly associated with spawning time in coho salmon (p < 0.0002) were previously associated with QTL for the same trait in rainbow trout; a fourth loci (Oki10) with a suggestive association (p = 0.00035) mapped 10 cM from locus OmyFGT34TUF in rainbow trout. The changes in allelic frequency observed after three generations of selection were greater than expected because of genetic drift. This work shows that comparing information from closely-related species is a valid strategy for identifying QTLs for marker-assisted selection in species whose genomes are poorly characterized or lack a saturated genetic map. PMID:22888302

  14. Evidence for a carrier state of infectious hematopoietic necrosis virus in chinook salmon Oncorhynchus tshawytscha.

    PubMed

    St Hilaire, S; Ribble, C; Traxler, G; Davies, T; Kent, M L

    2001-10-01

    In British Columbia, Canada, infectious hematopoietic necrosis virus (IHNV) is prevalent in wild sockeye salmon Oncorhynchus nerka and has caused disease in seawater net-pen reared Atlantic salmon Salmo salar. In this study, chinook salmon Oncorhynchus tshawytscha experimentally exposed to an isolate of IHNV found in British Columbia became carriers of the virus. When Atlantic salmon were cohabited with these virus-exposed chinook salmon, IHNV was isolated from the Atlantic salmon. Identification of chinook salmon populations that have been exposed to IHNV may be difficult, as virus isolation was successful only in fish that were concurrently infected with either Renibacterium salmoninarum or Piscirickettisia salmonis. Also, IHNV-specific antibodies were detected in only 2 of the 70 fish experimentally exposed to the virus. Two samples collected from chinook salmon exposed to IHNV while at a salt water net-pen site had a seroprevalence of 19 and 22%; however, the inconsistencies between our laboratory and field data suggest that further research is required before we can rely on serological analysis for identifying potential carrier populations. Because of the difficulty in determining the exposure status of populations of chinook salmon, especially if there is no concurrent disease, it may be prudent not to cohabit Atlantic salmon with chinook salmon on a farm if there is any possibility that the latter have been exposed to the virus. PMID:11710551

  15. Life-history organization of Yellowstone cutthroat trout (Oncorhynchus clarki bouvieri) in Yellowstone Lake

    USGS Publications Warehouse

    Gresswell, Robert E.; Liss, W.J.; Larson, Gary L.

    1994-01-01

    Life-history organization of the cutthroat trout (Oncorhynchus clarki) may be viewed at various levels, including species, subspecies, metapopulation, population, or individual. Each level varies in spatial scale and temporal persistence, and components at each level continually change with changes in environment. Cutthroat trout are widely distributed throughout the western United States, occurring in such diverse environments as coastal rivers of the Pacific Northwest and interior streams of the Great Basin. During its evolution the species has organized into 14 subspecies with many different life-history characteristics and habitat requirements. Within subspecies, organization is equally complex. For example, life-history traits, such as average size and age, migration strategy, and migration timing, vary among individual spawning populations of Yellowstone cutthroat trout (Oncorhynchus clarki bouvieri) in tributary streams of Yellowstone Lake. Understanding the effects of human perturbations on life-history organization is critical for management of the cutthroat trout and other polytypic salmonid species. Loss of diversity at any hierarchical level jeopardizes the long-term ability of the species to adapt to changing environments, and it may also lead to increased fluctuations in abundance and yield and increase the risk of extinction.

  16. Abnormal swimming behavior and increased deformities in rainbow trout Oncorhynchus mykiss cultured in low exchange water recirculation aquaculture systems

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Two studies were conducted to determine if accumulating water quality parameters would negatively impact rainbow trout Oncorhynchus mykiss health and welfare within water recirculation aquaculture systems (WRAS) that were operated at low and near-zero water exchange, with and without ozonation, and ...

  17. 50 CFR 226.211 - Critical habitat for Seven Evolutionarily Significant Units (ESUs) of Salmon (Oncorhynchus spp...

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 10 2014-10-01 2014-10-01 false Critical habitat for Seven Evolutionarily Significant Units (ESUs) of Salmon (Oncorhynchus spp.) in California. 226.211 Section 226.211 Wildlife and Fisheries NATIONAL MARINE FISHERIES SERVICE, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE MARINE MAMMALS...

  18. Enhancing highly unsaturated omega-3 fatty acids in phase-fed rainbow trout (Oncorhynchus mykiss) using Alaskan fish oils

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The objective of this research was to investigate differences in the kinetics of fatty acids (FA) deposition in fillets of market-sized (approximately 450g) rainbow trout (Oncorhynchus mykiss) fed diets containing commercial Alaskan fish oils versus menhaden oil. Comparisons were made with FA leve...

  19. Acute handling disturbance modulates plasma insulin-like growth factor binding proteins in rainbow trout (Oncorhynchus mykiss)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The effects of acute stressor exposure on proximal (growth hormone; GH) and distal (insulin-like growth factor-I; IGF-I and IGF-binding proteins) components of the somatotropic axis are poorly understood in finfish. We exposed rainbow trout (Oncorhynchus mykiss) to a 5-minute handling disturbance to...

  20. Effects of frying in various cooking oils on fatty acid content of farmed rainbow trout (Oncorhynchus mykiss)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Our goal was to describe the effects of frying with various oils on the fatty acid content of rainbow trout. Four different oils were evaluated (peanut oil, high oleic sunflower oil, corn oil, and canola oil). Farmed rainbow trout (Oncorhynchus mykiss) fillets were sliced into three portions and eac...

  1. Effects of triploidy on growth and protein degradation during the recovery from feed deprivation in rainbow trout (Oncorhynchus mykiss)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Identifying physiological differences between diploid and triploid rainbow trout will help define how ploidy affects mechanisms that impact growth and nutrient utilization. In this study juvenile diploid and triploid female rainbow trout (Oncorhynchus mykiss) were either continually fed or fasted f...

  2. Identification of Estrogen-responsive Vitelline Envelope Protein Fragments from Rainbow Trout (Oncorhynchus mykiss) Plasma Using Mass Spectrometry

    EPA Science Inventory

    Plasma protein biomarkers associated with exposure of rainbow trout (Oncorhynchus mykiss) to 17β-estradiol were isolated and identified using novel sample preparation techniques and state-of-the-art mass spectrometry and bioinformatics approaches. Juvenile male and female trout ...

  3. 50 CFR 226.210 - Central California Coast Coho Salmon (Oncorhynchus kisutch), Southern Oregon/Northern California...

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... Federal Register in accordance with 5 U.S.C. 552(a) and 1 CFR part 51. Copies of the USGS publication and... ADMINISTRATION, DEPARTMENT OF COMMERCE MARINE MAMMALS DESIGNATED CRITICAL HABITAT § 226.210 Central California... (Oncorhynchus kisutch). Critical habitat is designated to include all river reaches accessible to listed...

  4. 50 CFR 226.210 - Central California Coast Coho Salmon (Oncorhynchus kisutch), Southern Oregon/Northern California...

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... Federal Register in accordance with 5 U.S.C. 552(a) and 1 CFR part 51. Copies of the USGS publication and... ADMINISTRATION, DEPARTMENT OF COMMERCE MARINE MAMMALS DESIGNATED CRITICAL HABITAT § 226.210 Central California... (Oncorhynchus kisutch). Critical habitat is designated to include all river reaches accessible to listed...

  5. Does among-population variation in burst swimming performance of sockeye salmon Oncorhynchus nerka fry reflect early life migrations?

    PubMed

    Sopinka, N M; Hinch, S G; Lotto, A G; Whitney, C K; Patterson, D A

    2013-11-01

    Using a fixed-speed test, burst swimming performance was found to vary among nine populations of emergent sockeye salmon Oncorhynchus nerka fry reared in a common-garden environment. No consistent relationship was, however, detected between difficulty of fry migration (upstream v. downstream) to rearing areas and total burst swimming duration or bursting rate. PMID:24117961

  6. 50 CFR 226.210 - Central California Coast Coho Salmon (Oncorhynchus kisutch), Southern Oregon/Northern California...

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... Federal Register in accordance with 5 U.S.C. 552(a) and 1 CFR part 51. Copies of the USGS publication and... ADMINISTRATION, DEPARTMENT OF COMMERCE MARINE MAMMALS DESIGNATED CRITICAL HABITAT § 226.210 Central California... (Oncorhynchus kisutch). Critical habitat is designated to include all river reaches accessible to listed...

  7. 50 CFR 226.210 - Central California Coast Coho Salmon (Oncorhynchus kisutch), Southern Oregon/Northern California...

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... Federal Register in accordance with 5 U.S.C. 552(a) and 1 CFR part 51. Copies of the USGS publication and... ADMINISTRATION, DEPARTMENT OF COMMERCE MARINE MAMMALS DESIGNATED CRITICAL HABITAT § 226.210 Central California... (Oncorhynchus kisutch). Critical habitat is designated to include all river reaches accessible to listed...

  8. 50 CFR 226.210 - Central California Coast Coho Salmon (Oncorhynchus kisutch), Southern Oregon/Northern California...

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... Federal Register in accordance with 5 U.S.C. 552(a) and 1 CFR part 51. Copies of the USGS publication and... ADMINISTRATION, DEPARTMENT OF COMMERCE MARINE MAMMALS DESIGNATED CRITICAL HABITAT § 226.210 Central California... (Oncorhynchus kisutch). Critical habitat is designated to include all river reaches accessible to listed...

  9. Preliminary examination of oxidative stress in juvenile spring Chinook salmon (Oncorhynchus tshawytscha) of wild origin sampled from transport barges

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Migrating juvenile wild Chinook salmon (Oncorhynchus tshawytscha), collected and loaded onto transport barges at Lower Granite Dam on the Snake River, were sampled from barges at John Day Dam, 348 km downstream, at five-day intervals beginning late April and ending late May. An increase in lipid per...

  10. A second generation integrated map of the rainbow trout (Oncorhynchus mykiss) genome: analysis of synteny with model fish genomes

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In this paper we generated DNA fingerprints and end sequences from bacterial artificial chromosomes (BACs) from two new libraries to improve the first generation integrated physical and genetic map of the rainbow trout (Oncorhynchus mykiss) genome. The current version of the physical map is compose...

  11. Continuous Exposure to Infectious Pancreatic Necrosis Virus (IPNV) During Early Life Stages of Rainbow Trout, Oncorhynchus mykiss, Walbaum

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rainbow trout (Oncorhynchus mykiss, Walbaum) were exposed continuously to infectious pancreatic necrosis virus (IPNV) at 0, 10, 1,000, or 10,000 pfu/L of water to estimate the effects of chronic IPNV exposure on early life stages. Fish density averaged 35 fish/L (low) or 140 fish/L (high), and wate...

  12. Continuous exposure to infectious pancreatic necrosis virus during early life stages of rainbow trout, Oncorhynchus mykiss(Walbaum)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rainbow trout (Oncorhynchus mykiss, Walbaum) were exposed continuously to infectious pancreatic necrosis virus (IPNV) at 0, 10, 1,000, or 100,000 pfu/L of water to estimate the effects of chronic IPNV exposure on early life stages. Fish density averaged 35 fish/L or 140 fish/L, with a tank flow rat...

  13. Effect of anthocyanidins on myogenic differentiation in induced and non-induced primary myoblasts from rainbow trout (Oncorhynchus mykiss).

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A study was conducted to test whether an anthocyanidin mixture (peonidin, cyanidin and pelargonidin chloride) modulates myogenesis in both induced and non-induced myogenic cells from juvenile rainbow trout (Oncorhynchus mykiss). We evaluated three different anthocyanidin concentrations (1X, 2.5X and...

  14. Umatilla River Fish Passage Operations Program, 2003-2004 Annual Report.

    SciTech Connect

    Bronson, James P.; Duke, Bill B.

    2005-08-01

    Threemile Falls Dam (Threemile Dam), located near the town of Umatilla, is the major collection and counting point for adult salmonids returning to the Umatilla River. Returning salmon and steelhead were enumerated at Threemile Dam from August 19, 2003 to July 8, 2004. A total of 3,388 summer steelhead (Oncorhynchus mykiss); 1,482 adult, 638 jack, and 2,150 subjack fall chinook (O. tshawytscha); 8,319 adult and 667 jack coho (O. kisutch); and 2,965 adult and 270 jack spring chinook (O. tshawytscha) were counted. All fish were enumerated at the east bank facility. Of the fish counted, 34 summer steelhead and 31 adult and 9 jack spring chinook were hauled upstream from Threemile Dam. There were 3,166 summer steelhead; 1,076 adult, 554 jack and 2,026 subjack fall chinook; 8,213 adult and 647 jack coho; and 2,152 adult and 174 jack spring chinook either released at, or allowed to volitionally migrate past, Threemile Dam. Also, 121 summer steelhead; 388 adult and 19 jack fall chinook; and 561 adult and 29 jack spring chinook were collected for brood. In addition, 239 spring chinook were collected for the outplanting efforts in the Walla Walla Basin. There were also 25 pair hatchery steelhead adults collected for the progeny maker study. The Westland Canal juvenile facility (Westland), located near the town of Echo at rivermile (RM) 27, is the major collection point for outmigrating juvenile salmonids and steelhead kelts. The canal was open for 184 days between January 12 and July 6, 2004. During that period, fish were bypassed back to the river 173 days and were trapped 10 days. An estimated 44 pounds of juvenile fish were transported from Westland to the Umatilla River boat ramp (RM 0.5). Approximately 84% of the juveniles transported were salmonids. No steelhead kelts were hauled from Westland this year. The Threemile Dam west bank juvenile bypass was opened on February 10, 2004 for outmigration sampling and continued until July 7, 2004 when sampling was discontinued

  15. Exposure to waterborne Cu inhibits cutaneous Na⁺ uptake in post-hatch larval rainbow trout (Oncorhynchus mykiss).

    PubMed

    Zimmer, Alex M; Brauner, Colin J; Wood, Chris M

    2014-05-01

    In freshwater rainbow trout (Oncorhynchus mykiss), two common responses to acute waterborne copper (Cu) exposure are reductions in ammonia excretion and Na(+) uptake at the gills, with the latter representing the likely lethal mechanism of action for Cu in adult fish. Larval fish, however, lack a functional gill following hatch and rely predominantly on cutaneous exchange, yet represent the most Cu-sensitive life stage. It is not known if Cu toxicity in larval fish occurs via the skin or gills. The present study utilized divided chambers to assess cutaneous and branchial Cu toxicity over larval development, using disruptions in ammonia excretion (Jamm) and Na(+) uptake (Jin(Na)) as toxicological endpoints. Early in development (early; 3 days post-hatch; dph), approximately 95% of Jamm and 78% of Jin(Na) occurred cutaneously, while in the late developmental stage (late; 25 dph), the gills were the dominant site of exchange (83 and 87% of Jamm and Jin(Na), respectively). Exposure to 50 μg/l Cu led to a 49% inhibition of Jamm in the late developmental stage only, while in the early and middle developmental (mid; 17 dph) stages, Cu had no effect on Jamm. Jin(Na), however, was significantly inhibited by Cu exposure at the early (53% reduction) and late (47% reduction) stages. Inhibition at the early stage of development was mediated by a reduction in cutaneous uptake, representing the first evidence of cutaneous metal toxicity in an intact aquatic organism. The inhibitions of both Jamm and Jin(Na) in the late developmental stage occurred via a reduction in branchial exchange only. The differential responses of the skin and gills to Cu exposure suggest that the mechanisms of Jamm and Jin(Na) and/or Cu toxicity differ between these tissues. Exposure to 20μg/l Cu revealed that Jamm is the more Cu-sensitive process. The results presented here have important implications in predicting metal toxicity in larval fish. The Biotic Ligand Model (BLM) is currently used to predict

  16. Distribution, size, and interannual, seasonal and diel food habits of northern Gulf of Alaska juvenile pink salmon, Oncorhynchus gorbuscha

    NASA Astrophysics Data System (ADS)

    Armstrong, Janet L.; Boldt, Jennifer L.; Cross, Alison D.; Moss, Jamal H.; Davis, Nancy D.; Myers, Katherine W.; Walker, Robert V.; Beauchamp, David A.; Haldorson, Lewis J.

    2005-01-01

    An integral part of assessing the northern Gulf of Alaska (GOA) ecosystem is the analysis of the food habits and feeding patterns of abundant zooplanktivorous fish. Juvenile pink salmon Oncorhynchus gorbuscha are highly abundant zooplanktivores, and support valuable commercial fisheries as adults. We document variability in pink salmon distribution and size from summer to early fall, and present major trends in their food habits by summarizing interannual (August 1999-2001), seasonal (July-October 2001) and diel (August 2000, and July-September 2001) feeding patterns based on analysis of stomach contents of juvenile pink salmon collected along the Seward Line (GOA) and in Prince William Sound (PWS), Alaska. Diets of juvenile pink salmon were more diverse in 2001 compared to either 1999 or 2000. Small pteropods ( Limacina helicina) composed the majority (>60%) of prey consumed in 1999 and 2000; whereas large copepods, euphausiids, and small pteropods composed the majority of prey in 2001. As juvenile pink salmon increased in size, they consumed increasingly larger prey from August to October 2001 in the GOA. The diet of GOA juvenile pink salmon was different and more diverse than the diet of fish caught in PWS. The dominant prey in PWS during July-October was hyperiid amphipods, whereas the primary prey in the GOA were larvaceans and euphausiids in July, then copepods plus small pteropods, amphipods, euphausiids, larval crabs, and shrimp in August. In September and October, diets in both PWS and GOA included high percentages of larger prey items, including fish, euphausiids, and large pteropods ( Clio pyramidata). Diel comparisons of stomach contents showed pink salmon fed during daylight hours with stomach fullness increasing from dawn to a maximum fullness 8-12 h after sunrise, and declining thereafter. We hypothesize that juvenile pink salmon in the northern GOA consumed distinct and varied prey from the suite of zooplankton available during summer months, July

  17. Residues of DDT in lake trout (Salvelinus namaycush) and coho salmon (Oncorhynchus kisutch) from the Great Lakes

    USGS Publications Warehouse

    Reinert, Robert E.; Bergman, Harold L.

    1974-01-01

    Concentrations of DDT residues were higher in lake trout (Salvelinus namaycush) from southern Lake Michigan in 1966–70 (average 18.1 ppm in fish 558–684 mm long) than in lake trout of the same size-class from Lake Superior in 1968–69 (4.4 ppm), and higher in adult coho salmon (Oncorhynchus kisutch) from Lake Michigan in 1968–71 (averages for different year-classes, 9.9–14.0 ppm) than in those from Lake Erie in 1969 (2.2 ppm). Residues were significantly higher in lake trout from southern Lake Michigan than in those from the northern part of the lake. In lakes Michigan and Superior, the levels increased with length of fish and percentage oil. In Lake Michigan coho salmon, the residues remained nearly stable (2–4 ppm) from September of the 1st yr of lake residence through May or early June of the 2nd yr, but increased three to four times in the next 3 mo. Residues in Lake Erie coho salmon did not increase during this period, which preceded the spawning season. Although the concentrations of total residues in whole, maturing Lake Michigan coho salmon remained unchanged from August 1968 until near the end of the spawning season in January 1969, the residues were redistributed in the tissues of the spawning-run fish; concentrations in the loin and brain were markedly higher in January than in August. This relocation of DDT residues accompanied a marked decrease in the percentage of oil in the fish, from 13.2 in August to 2.8 in January. Concentrations of residues were relatively high in eggs of both lake trout (4.6 ppm) and coho salmon (7.4–10.2 ppm) from Lake Michigan. The percentage composition of the residues (p,p′DDE, o,p′/DDT, p,p′DDT, and p,p′DDT) did not differ significantly with life stage, size, age, or locality, or date of collection of lake trout or coho salmon.

  18. Effects of Habitat Enhancement on Steelhead Trout and Coho Salmon Smolt Production, Habitat Utilization, and Habitat Availability in Fish Creek, Oregon, 1986 Annual Report.

    SciTech Connect

    Everest, Fred H.; Reeves, Gordon H.; Hohler, David B.

    1987-06-01

    Construction and evaluation of salmonid habitat improvements on Fish Creek, a tributary of the upper Clackamas River, was continued in fiscal year 1986 by the Estacada Ranger District, Mt. Hood National Forest, and the Anadromous Fish Habitat Research Unit of the Pacific Northwest Research Station (PNW), USDA Forest Service. The study began in 1982 when PNW entered into an agreement with the Mt. Hood National Forest to evaluate fish habitat improvements in the Fish Creek basin on the Estacada Ranger District. The project was initially conceived as a 5-year effort (1982-1986) to be financed with Forest Service funds. The habitat improvement program and the evaluation of improvements were both expanded in mid-1983 when the Bonneville Power Administration (BPA) entered into an agreement with the Mt. Hood National Forest to cooperatively fund work on Fish Creek. Habitat improvement work in the basin is guided by the Fish Creek Habitat Rehabilitation-Enhancement Framework developed cooperatively by the Estacada Ranger District, the Oregon Department of Fish and Wildlife, and the Pacific Northwest Research Station (see Appendix 2). The framework examines potential factors limiting production of salmonids in the basin, and the appropriate habitat improvement measures needed to address the limiting factors. Habitat improvement work in the basin has been designed to: (1) improve quantity, quality, and distribution of spawning habitat for coho and spring chinook salmon and steelhead trout, (2) increase low flow rearing habitat for steelhead trout and coho salmon, (3) improve overwintering habitat for coho salmon and steelhead trout, (4) rehabilitate riparian vegetation to improve stream shading to benefit all species, and (5) evaluate improvement projects from a drainage wide perspective. The objectives of the evaluation include: (1) Drainage-wide evaluation and quantification of changes in salmonid spawning and rearing habitat resulting from a variety of habitat

  19. CRITICAL EVALUATION OF A NEW MULTIPLEX SYSTEM USED FOR PARENTAL ALLOCATION AND BROODSTOCK MANAGEMENT IN RAINBOW TROUT (Oncorhynchus mykiss) SELECTION PROGRAMS

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Examination of microsatellite variation at several polymorphic loci is the predominant method for determining parentage and examining genetic diversity within rainbow trout (Oncorhynchus mykiss). The genotyping costs associated with these analyses are considerable for large-scale commercial breedin...

  20. Investigation of Head Burns in Adult Salmonids : Phase 1 : Examination of Fish at Lower Granite Dam, July 2, 1996. Final Report.

    SciTech Connect

    Elston, Ralph

    1996-08-01

    Head burn is a descriptive clinical term used by fishery biologists to describe exfoliation of skin and underlying connective tissue of the jaw and cranial region of salmonids, observed at fish passage facilities on the Columbia and Snake Rivers. The observations are usually made on upstream migrant adult salmon or steelhead. An expert panel, convened in 1996, to evaluate the risk and severity of gas bubble disease (GBD) in the Snake and Columbia River system believed that, while head burns appeared to be distinct from GBD, the relationship between dissolved gas saturation in the rivers and head burns was uncertain.

  1. Study of Disease and Physiology in the 1979 Homing Study Hatchery Stocks: A Supplement to "Imprinting Salmon and Steelhead Trout for Homing", 1979 by Slatick, Gilbreath, and Walch.

    SciTech Connect

    Novotny, Anthony J.; Zaugg, Waldo S.

    1981-09-01

    The National Marine Fisheries Service (NMFS), under contract to the Bonneville Power Administration, is conducting research on imprinting salmon and steelhead for homing (Slatick et al. 1979, 1980; Novotny and Zaugg 1979). The studies were begun with little background knowledge of the effects of disease or certain physiological functions on imprinting and homing in salmonids. Consequently, work aimed at filling this void was begun by the authors in 1978 (Novotny and Zaugg 1979) and continued in 1979. In 1979, we examined random samples of normal populations of homing test fish at the hatcheries to determine the physiological readiness to migrate and adapt to seawater and general fish health. At the Manchester Marine Experimental Station, Manchester, Washington, we determined the survival of samples of the test fish maintained in marine net-pens after release from the hatcheries. Hatcheries and stocks sampled are listed in Table 1.

  2. Analysis of dam-passage survival of yearling and subyearling Chinook salmon and juvenile steelhead at The Dalles Dam, Oregon, 2010

    USGS Publications Warehouse

    Beeman, John W.; Kock, Tobias J.; Perry, Russell W.; Smith, Steven G.

    2011-01-01

    We performed a series of analyses of mark-recapture data from a study at The Dalles Dam during 2010 to determine if model assumptions for estimation of juvenile salmonid dam-passage survival were met and if results were similar to those using the University of Washington's newly developed ATLAS software. The study was conducted by the Pacific Northwest National Laboratory and used acoustic telemetry of yearling Chinook salmon, juvenile steelhead, and subyearling Chinook salmon released at three sites according to the new virtual/paired-release statistical model. This was the first field application of the new model, and the results were used to measure compliance with minimum survival standards set forth in a recent Biological Opinion. Our analyses indicated that most model assumptions were met. The fish groups mixed in time and space, and no euthanized tagged fish were detected. Estimates of reach-specific survival were similar in fish tagged by each of the six taggers during the spring, but not in the summer. Tagger effort was unevenly allocated temporally during tagging of subyearling Chinook salmon in the summer; the difference in survival estimates among taggers was more likely a result of a temporal trend in actual survival than of tagger effects. The reach-specific survival of fish released at the three sites was not equal in the reaches they had in common for juvenile steelhead or subyearling Chinook salmon, violating one model assumption. This violation did not affect the estimate of dam-passage survival, because data from the common reaches were not used in its calculation. Contrary to expectation, precision of survival estimates was not improved by using the most parsimonious model of recapture probabilities instead of the fully parameterized model. Adjusting survival estimates for differences in fish travel times and tag lives increased the dam-passage survival estimate for yearling Chinook salmon by 0.0001 and for juvenile steelhead by 0.0004. The

  3. Differences in neurobehavioral responses of chinook salmon (Oncorhynchus tshawytscha) and rainbow trout (Oncorhynchus mykiss) exposed to copper and cobalt: Behavioral avoidance

    SciTech Connect

    Hansen, J.A.; Marr, J.C.A.; Lipton, J.; Cacela, D.; Bergman, H.L.

    1999-09-01

    Behavioral avoidance of copper (Cu), cobalt (Co), and a Cu and Co mixture in soft water differed greatly between rainbow trout (Oncorhynchus mykiss) and chinook salmon (O. tshawytscha). Chinook salmon avoided at least 0.7 {micro}g Cu/L, 24 {micro}g Co/L, and the mixture of 1.0 {micro}g Cu/L and 0.9 {micro}g Co/L, whereas rainbow trout avoided at least 1.6 {micro}g Cu/L, 180 {micro}g Co/L, and the mixture of 2.6 {micro}g Cu/L and 2.4 {micro}g Co/L. Chinook salmon were also more sensitive to the toxic effects of Cu in that they failed to avoid {ge}44 {micro}g Cu/L, whereas rainbow trout failed to avoid {ge}180 {micro}g Cu/L. Furthermore, following acclimation to 2 {micro}g Cu/L, rainbow trout avoided 4 {micro}g Cu/L and preferred clean water, but chinook salmon failed to avoid any Cu concentrations and did not prefer clean water. The failure to avoid high concentrations of metals by both species suggests that the sensory mechanism responsible for avoidance responses was impaired. Exposure to Cu concentrations that were not avoided could result in lethality from prolonged Cu exposure or in impairment of sensory-dependent behaviors that are essential for survival and reproduction.

  4. Evaluation of a Prototype Surface Flow Bypass for Juvenile Salmon and Steelhead at the Powerhouse of Lower Granite Dam, Snake River, Washington, 1996-2000

    SciTech Connect

    Johnson, Gary E.; Anglea, Steven M.; Adams, Noah S.; Wik, Timothy O.

    2005-02-28

    A surface flow bypass provides a route in the upper water column for naturally, surface-oriented juvenile salmonids to safely migrate through a hydroelectric dam. Surface flow bypasses were recommended in several regional salmon recovery plans as a means to increase passage survival of juvenile salmonids at Columbia and Snake River dams. A prototype surface flow bypass, called the SBC, was retrofit on Lower Granite Dam and evaluated from 1996 to 2000 using biotelemetry and hydroacoustic techniques. In terms of passage efficiency, the best SBC configurations were a surface skimmer (99 m3/s [3,500 cfs], three entrances 5 m wide, 5 m deep and one entrance 5 m wide, 15 m deep) and a single chute (99 m3/s, one entrance 5 m wide, 8.5 m deep). They each passed 62 ? 3% (95% confidence interval) of the total juvenile fish population that entered the section of the dam with the SBC entrances (Turbine Units 4-5). Smooth entrance shape and concentrated surface flow characteristics of these configurations are worth pursuing in designs for future surface flow bypasses. In addition, a guidance wall in the Lower Granite Dam forebay diverted the following percentages of juvenile salmonids away from Turbine Units 1-3 toward other passage routes, including the SBC: run-at-large 79 ? 18%; hatchery steelhead 86%; wild steelhead 65%; and yearling chinook salmon 66%. When used in combination with spill or turbine intake screens, a surface flow bypass with a guidance wall can produce a high level (> 90% of total project passage) of non-turbine passage and provide operational flexibility to fisheries managers and dam operators responsible for enhancing juvenile salmonid survival.

  5. Discovery and characterization of a large number of diagnostic markers to discriminate Oncorhynchus mykiss and O. clarkii.

    PubMed

    Pritchard, V L; Abadía-Cardoso, A; Garza, J C

    2012-09-01

    Hybridization of cutthroat trout and steelhead/rainbow trout is ubiquitous where they are sympatric, either naturally or owing to introductions. The ability to detect hybridization and introgression between the two species would be greatly improved by the development of more diagnostic markers validated across the two species' many phylogenetic lineages. Here, we describe 81 novel genetic markers and associated assays for discriminating the genomes of these sister species. These diagnostic nucleotide polymorphisms were discovered by sequencing of rainbow trout expressed sequence tags (ESTs) in a diverse panel of both cutthroat trout and steelhead/rainbow trout. The resulting markers were validated in a large number of lineages of both species, including all extant subspecies of cutthroat trout and most of the lineages of rainbow trout that are found in natural sympatry with cutthroat trout or used in stocking practices. Most of these markers (79%) distinguish genomic regions for all lineages of the two species, but a small number do not reliably diagnose coastal, westslope and/or other subspecies of cutthroat trout. Surveys of natural populations and hatchery strains of trout and steelhead found rare occurrences of the alternative allele, which may be due to either previous introgression or shared polymorphism. The availability of a large number of genetic markers for distinguishing genomic regions originating in these sister species will allow the detection of both recent and more distant hybridization events, facilitate the study of the evolutionary dynamics of hybridization and provide a powerful set of tools for the conservation and management of both species. PMID:22591214

  6. Nutritional factors in the biochemical pathology of Corynebacterial kidney disease in the coho salmon (Oncorhynchus kisutch)

    USGS Publications Warehouse

    Wedemeyer, Gary A.; Ross, A.J.

    1973-01-01

    The influence of diet ingredient on the morbidity and biochemical pathogenesis of corynebacterial kidney disease was investigated using juvenile coho salmon (Oncorhynchus kisutch) fed the Abernathy dry ration made up with either corn gluten or cottonseed meal (isoprotein, isocaloric substitution). Evaluation of incidence of infection, pituitary activation and aspects of carbohydrate metabolism, acid-base balance, renal function, and hematopoietic activity showed that the actual disease incidence was about the same for both diets but the nonspecific stress of infection was more severe in fish fed the corn gluten.Discriminant function calculations combining four physiological parameters gave a probability of 0.86 for successfully diagnosing infected fish on the basis of these blood chemistry tests.

  7. Cholinergic and behavioral neurotoxicity of carbaryl and cadmium to larval rainbow trout (Oncorhynchus mykiss).

    PubMed

    Beauvais, S L; Jones, S B; Parris, J T; Brewer, S K; Little, E E

    2001-05-01

    Pesticides and heavy metals are common environmental contaminants that can cause neurotoxicity to aquatic organisms, impairing reproduction and survival. Neurotoxic effects of cadmium and carbaryl exposures were estimated in larval rainbow trout (RBT; Oncorhynchus mykiss) using changes in physiological endpoints and correlations with behavioral responses. Following exposures, RBT were videotaped to assess swimming speed. Brain tissue was used to measure cholinesterase (ChE) activity, muscarinic cholinergic receptor (MChR) number, and MChR affinity. ChE activity decreased with increasing concentrations of carbaryl but not of cadmium. MChR were not affected by exposure to either carbaryl or cadmium. Swimming speed correlated with ChE activity in carbaryl-exposed RBT, but no correlation occurred in cadmium-exposed fish. Thus, carbaryl exposure resulted in neurotoxicity reflected by changes in physiological and behavioral parameters measured, while cadmium exposure did not. Correlations between behavior and physiology provide a useful assessment of neurotoxicity. PMID:11386719

  8. Atmospheric depression-mediated water temperature changes affect the vertical movement of chum salmon Oncorhynchus keta.

    PubMed

    Kitagawa, Takashi; Hyodo, Susumu; Sato, Katsufumi

    2016-08-01

    The Sanriku coastal area, Japan, is one of the southern-most natural spawning regions of chum salmon Oncorhynchus keta. Here, we report their behavioral response to changes in ambient temperature after the passage of an atmospheric depression during the early spawning season. Before the passage, all electrically tagged fish moved vertically for several hours to depths below the shallow thermocline at >100 m. However, during the atmospheric depression, the salmon shortened the duration of their vertical movements and spent most time at the surface. The water column was homogenous at <150 m deep except for the surface. The descending behavior may have been discontinued because the cooler water below the thermocline was no longer in a thermally defined layer, due to strong vertical mixing by high wave action. Instead, they likely spent time within the cooler water temperatures at the surface of bays to minimize metabolic energy cost during migration. PMID:27236419

  9. Oral pharmacological treatments for parasitic diseases of rainbow trout Oncorhynchus mykiss. II. Gyrodactylus sp.

    PubMed

    Tojo, J L; Santamarina, M T

    1998-07-30

    A total of 24 drugs were evaluated as regards their efficacy for oral treatment of gyrodactylosis in rainbow trout Oncorhynchus mykiss. In preliminary trials, all drugs were supplied to infected fish at 40 g per kg of feed for 10 d. Twenty-two of the drugs tested (aminosidine, amprolium, benznidazole, bithionol, chloroquine, diethylcarbamazine, flubendazole, levamisole, mebendazole, metronidazole, niclosamide, nitroxynil, oxibendazole, parbendazole, piperazine, praziquantel, ronidazole, secnidazole, tetramisole, thiophanate, toltrazuril and trichlorfon) were ineffective. Triclabendazole and nitroscanate completely eliminated the infection. Triclabendazole was effective only at the screening dosage (40 g per kg of feed for 10 d), while nitroscanate was effective at dosages as low as 0.6 g per kg of feed for 1 d. PMID:9745715

  10. Efficacy of selected oral chemotherapeutants against Ichthyophthirius multifiliis (Ciliophora: Ophyroglenidae) infecting rainbow trout Oncorhynchus mykiss.

    PubMed

    Shinn, Andrew P; Wootten, Rodney; Côté, Isabelle; Sommerville, Christina

    2003-06-20

    The chemotherapeutic efficacy of 6 in-feed compounds against Ichthyophthirius multifiliis Fouquet, 1876 was assessed using experimental infections of rainbow trout Oncorhynchus mykiss (Walbaum) fingerlings. Trial doses of 104 ppm amprolium hydrochloride or 65 ppm clopidol fed to fish for 10 d prior to infection significantly reduced the number of trophonts establishing in trout fingerlings by 62.0 and 35.2% respectively. In-feed treatments of infected trout with either 63 or 75 ppm amprolium hydrochloride, 92 ppm clopidol, or 38, 43 or 47 ppm salinomycin sodium for 10 d also significantly reduced the number of surviving trophonts by 77.6 and 32.2% for amprolium, 20.1% for clopidol and 80.2, 71.9 and 93.3% respectively for salinomycin sodium. PMID:12887250

  11. Immunization of sockeye salmon (Oncorhynchus nerka) against vibriosis using the hyperosmotic infiltration technique

    USGS Publications Warehouse

    Croy, Thomas R.; Amend, Donald F.

    1977-01-01

    Various procedures of hyperosmotic infiltration (HI) and intraperitoneal injection were used to vaccinate sockeye salmon (Oncorhynchus nerka) with killed Vibrio anguillarum. Excellent protection was evident against experimentally induced vibriosis in the groups immunized by HI with 10 × Hanks' balanced salt solution (HBSS), 1 × HBSS with 8.0% NaCl and 5.3% NaCl, as well as in the injected groups. Comparisons were made among the various immunization methods by vaccinating fish with ten-fold serial dilutions of bacterin, then challenging them by the water contact method after 6 or 9 weeks. Protection was somewhat better with 10 × HBSS than with 5.3% NaCl, and 1 × HBSS containing 8.0% NaCl was markedly superior to the vaccination of fish without hyperosmotic treatment. Agglutinin titers did not exceed 1 : 8 in any group.

  12. Inhibition of testicular growth in rainbow trout (Oncorhynchus mykiss) exposed to estrogenic alkylphenolic chemicals

    SciTech Connect

    Jobling, S.; Sumpter, J.P.; Sheahan, D.; Osborne, J.A.; Matthiessen, P.

    1996-02-01

    It is becoming evident that an increasing number of widely used industrial and agricultural chemicals are estrogenic. The biodegradation products of a major group of nonionic surfactants, the alkylphenol polyethoxylates, are one such group. Some of these chemicals are widespread aquatic pollutants, and bioconcentrate in aquatic biota. Exposure of male rainbow trout (Oncorhynchus mykiss) to four different alkylphenolic chemicals caused synthesis of vitellogenin, a process normally dependent on endogenous estrogens, and a concomitant inhibition of testicular growth. The magnitude of these estrogenic effects was dependent on the estrogenic potency of the chemical, the stage of reproductive development of the fish, and the concentration of the chemical in the water. These results support the contention that exposure of wildlife to environmentally persistent estrogenic chemicals can result in deleterious reproductive consequences.

  13. SalmonDB: a bioinformatics resource for Salmo salar and Oncorhynchus mykiss

    PubMed Central

    Di Génova, Alex; Aravena, Andrés; Zapata, Luis; González, Mauricio; Maass, Alejandro; Iturra, Patricia

    2011-01-01

    SalmonDB is a new multiorganism database containing EST sequences from Salmo salar, Oncorhynchus mykiss and the whole genome sequence of Danio rerio, Gasterosteus aculeatus, Tetraodon nigroviridis, Oryzias latipes and Takifugu rubripes, built with core components from GMOD project, GOPArc system and the BioMart project. The information provided by this resource includes Gene Ontology terms, metabolic pathways, SNP prediction, CDS prediction, orthologs prediction, several precalculated BLAST searches and domains. It also provides a BLAST server for matching user-provided sequences to any of the databases and an advanced query tool (BioMart) that allows easy browsing of EST databases with user-defined criteria. These tools make SalmonDB database a valuable resource for researchers searching for transcripts and genomic information regarding S. salar and other salmonid species. The database is expected to grow in the near feature, particularly with the S. salar genome sequencing project. Database URL: http://genomicasalmones.dim.uchile.cl/ PMID:22120661

  14. Recent physical connections may explain weak genetic structure in western Alaskan chum salmon (Oncorhynchus keta) populations.

    PubMed

    Garvin, Michael R; Kondzela, Christine M; Martin, Patrick C; Finney, Bruce; Guyon, Jeffrey; Templin, William D; Decovich, Nick; Gilk-Baumer, Sara; Gharrett, Anthony J

    2013-07-01

    Low genetic divergence at neutral loci among populations is often the result of high levels of contemporary gene flow. Western Alaskan summer-run chum salmon (Oncorhynchus keta) populations demonstrate weak genetic structure, but invoking contemporary gene flow as the basis for the low divergence is problematic because salmon home to their natal streams and some of the populations are thousands of kilometers apart. We used genotypes from microsatellite and single nucleotide polymorphism loci to investigate alternative explanations for the current genetic structure of chum salmon populations from western Alaska. We also estimated current levels of gene flow among Kuskokwim River populations. Our results suggest that weak genetic structure is best explained by physical connections that occurred after the Holocene Thermal Maximum among the Yukon, Kuskokwim, and Nushagak drainages that allowed gene flow to occur among now distant populations. PMID:23919176

  15. Isolation and structural characterization of glycosaminoglycans from heads of red salmon (Oncorhynchus nerka)

    PubMed Central

    Zhang, Fuming; Xie, Jin; Linhardt, Robert J.

    2015-01-01

    Glycosaminoglycans (GAGs) are linear, highly negatively charged polysaccharides. They are ubiquitous molecules exhibiting a wide range of biological functions with numerous applications in pharmaceutical, cosmetic, and nutraceutical industrials. The commercial fish-processing industry generates large quantities of solid waste, which can represent a potential resource for GAG production. In this study, we used a three-step recovery and purification scheme for isolation of GAGs from the heads of red salmon (Oncorhynchus nerka). The GAGs recovery yield was 6 to 7 mg from 1 gram of salmon head powder. The recovered GAGs were structurally analyzed with polyacrylamide gel electrophoresis and by disaccharide composition analysis with reversed-phase ion-pair high-performance liquid chromatography. The analyses showed the major composition of the GAGs in red salmon head were chondroitin sulfate C and E. PMID:26918243

  16. Amoebic gill infection in coho salmon Oncorhynchus kisutch farmed in Korea.

    PubMed

    Kim, Wi-Sik; Kong, Kyoung-Hui; Kim, Jong-Oh; Oh, Myung-Joo

    2016-08-31

    About 70% mortality occurred in cultured coho salmon Oncorhynchus kisutch at a marine farm in the South Sea of Korea in 2014. Diseased fish showed greyish or pale patches on the gills, with no internal signs of disease. No bacteria or viruses were isolated from diseased fish, but numerous amoebae were found on the gills. Histopathological examinations revealed extensive hyperplastic epithelium and lamellar fusion in the gills. Numerous amoebae were seen between gill filaments. The amoebae had a 630 bp partial 18S rRNA gene fragment specific to Neoparamoeba perurans. Phylogenetic analysis based on partial 18S rRNA gene nucleotide sequences revealed that this Korean amoeba belonged to the N. perurans group. This is the first report of N. perurans infection in Korea. PMID:27596862

  17. Functional characterization of a BCL10 isoform in the rainbow trout Oncorhynchus mykiss

    PubMed Central

    Mazzone, Pellegrino; Scudiero, Ivan; Coccia, Elena; Ferravante, Angela; Paolucci, Marina; D’Andrea, Egildo Luca; Varricchio, Ettore; Pizzulo, Maddalena; Reale, Carla; Zotti, Tiziana; Vito, Pasquale; Stilo, Romania

    2015-01-01

    The complexes formed by BCL10, MALT1 and members of the family of CARMA proteins have recently been the focus of much attention because they represent a key mechanism for regulating activation of the transcription factor NF-κB. Here, we report the functional characterization of a novel isoform of BCL10 in the trout Oncorhynchus mykiss, which we named tBCL10. tBCL10 dimerizes, binds to components of the CBM complex and forms cytoplasmic filaments. Functionally, tBCL10 activates NF-κB transcription factor and is inhibited by the deubiquitinating enzyme A20. Finally, depletion experiments indicate that tBCL10 can functionally replace the human protein. This work demonstrates the evolutionary conservation of the mechanism of NF-κB activation through the CBM complex, and indicates that the rainbow trout O.mykiss can serve as a model organism to study this pathway. PMID:25834783

  18. Use of behavioral responses of rainbow trout Oncorhynchus mykiss in identifying sublethal exposure to hexavalent chromium.

    PubMed

    Svecevicius, Gintaras

    2009-05-01

    Laboratory tests were conducted in a flow-through apparatus on 1-year-old rainbow trout Oncorhynchus mykiss to evaluate the sensitivity of a number of their behavioral responses to hexavalent chromium (Cr(6+)). Test fish were exposed to Cr(6+) concentrations corresponding to 0.001-1 parts of the rainbow trout 96-h LC50 (0.029-28.5 mg Cr/L, respectively) in short-term (15 min) tests. Sensitivity parameter responses could be arranged into the following sequence: latent period of detection response = locomotor activity > gill ventilation frequency > coughing rate. All the rainbow trout responses were sensitive behavioral indicators of sublethal exposure. Behavioral responses meet the criteria as rapid tools for bioassay testing and could be easily standardized using Cr(6+) as a reference toxicant. PMID:19190838

  19. Fast genomic biomarker responses of retene and pyrene in liver of juvenile rainbow trout, Oncorhynchus mykiss.

    PubMed

    Räsänen, Kati; Arsiola, Tiina; Oikari, Aimo

    2012-10-01

    We studied the transcriptive effects of two PAHs, retene (RET) and pyrene (PYR), in three equimolar sublethal concentrations (0.9-10 μg/L) in the liver of juvenile rainbow trout, Oncorhynchus mykiss. After 24 h of in vivo exposure, expressions of selected genes (CYP1A, Hsp30, Hsp70, Grp78, Sep15, GP1) were analyzed by quantitative reverse transcription polymerase chain reaction (qRT-PCR). These PAHs changed the studied gene transcriptions differently, but not significantly, except for CYP1A, which was induced only by RET. RET induced CYP1A gene expression even at low, environmentally realistic concentrations in the liver of juvenile rainbow trout. PMID:22864635

  20. Avoidance of copper and zinc by rainbow trout Oncorhynchus mykiss pre-exposed to copper.

    PubMed

    Svecevičius, Gintaras

    2012-01-01

    Laboratory tests were conducted on 1-year-old rainbow trout Oncorhynchus mykiss in a counter-current flow, steep-gradient chamber to evaluate their ability to detect and avoid copper and zinc at concentrations of 0.1 mg Cu/L and 1 mg Zn/L, respectively, after 10-day pre-exposure to five copper sublethal concentrations ranging from 0.1 to 0.5 mg Cu/L and after 10-day re-acclimation period in clean water. Avoidance response intensity in affected fish significantly decreased with increase in pre-exposure Cu concentration. The strength of avoidance response to Cu and Zn test solutions in pre-exposed fish after re-acclimation gradually increased in a concentration-dependent order. PMID:22002177

  1. Whole body and tissue blood volumes of two strains of rainbow trout (Oncorhynchus mykiss )

    USGS Publications Warehouse

    Gingerich, W.H.; Pityer, R.A.; Rach, J.J.

    1990-01-01

    1. Estimates of apparent packed cell, plasma and total blood volumes for the whole body and for 13 selected tissues were compared between Kamloops and Wytheville strains of rainbow trout (Oncorhynchus mykiss) by the simultaneous injection of two vascular tracers, radiolabeled trout erythrocytes (51Cr-RBC) and radioiodated bovine serum albumin (125I-BSA). 2. Whole body total blood volume, plasma volume and packed cell volume were slightly, but not significantly greater in the Wytheville trout, whereas, the apparent plasma volumes and total blood volumes in 4 of 13 tissues were significantly greater in the Kamloops strain. 3. Differences were most pronounced in highly perfused organs, such as the liver and kidney and in organs of digestion such as the stomach and intestines. 4. Differences in blood volumes between the two strains may be related to the greater permeability of the vascular membranes in the Kamloops strain fish.

  2. Dietary effects of Spirulina platensis on hematological and serum biochemical parameters of rainbow trout (Oncorhynchus mykiss).

    PubMed

    Yeganeh, Sakineh; Teimouri, Mahdi; Amirkolaie, Abdolsamad Keramat

    2015-08-01

    This study evaluated the effects of diets containing 0, 2.5, 5, 7.5 and 10% of Spirulina platensis on hematological and serum biochemical parameters of rainbow trout (Oncorhynchus mykiss). Fish (n=180; 101±8 g) were randomly divided into fifteen 300 L fiberglass tanks in triplicates for a period of ten weeks. The RBC, WBC, hemoglobin, total protein and albumin levels increased significantly in the groups supplemented with S. platensis. Dietary inclusion of S. platensis had no significant effects on hematocrit, cholesterol, triglyceride and lactate of the blood. HDL-cholesterol was larger in rainbow trout fed 10% S. platensis in comparison with the other diets, whereas LDL-cholesterol significantly decreased with increasing of S. platensis inclusion. Cortisol and glucose significantly decreased with increasing of S. platensis inclusion. The present results demonstrate that inclusion of 10% S. platensis can be introduced as an immunostimulant in rainbow trout diets. PMID:26267095

  3. Effect of copper sulphate on the antioxidant parameters in the rainbow trout fry, Oncorhynchus mykiss.

    PubMed

    Yonar, M E; Ispir, U; Mişe Yonar, S; Kirici, M

    2016-01-01

    The aim of this study was to evaluate antioxidant responses of rainbow trout (Oncorhynchus mykiss) exposed to different concentrations of copper sulphate (CuSO4). Fish were exposed to 0 (Group I-control), 5 (Group II), 15 (Group III) and 30 µg/L (Group IV) concentrations of CuSO4 for 14 days. Liver and gills samples were collected at the end of the experiment, and analysed for their oxidant-antioxidant status, including the malondialdehyde (MDA) level, the catalase (CAT) and glutathione peroxidase (GSH-Px) activities as well as the reduced glutathione (GSH) concentration. Results obtained showed that the levels of MDA increased in tissues of fish. Compared to control, GSH level and GSH-Px and CAT activities were significantly reduced in the fish that were exposed to different concentrations of CuSO4. The result demonstrated that CuSO4 has an oxidative-stress-inducing potential in fish. PMID:27262803

  4. Recent physical connections may explain weak genetic structure in western Alaskan chum salmon (Oncorhynchus keta) populations

    PubMed Central

    Garvin, Michael R; Kondzela, Christine M; Martin, Patrick C; Finney, Bruce; Guyon, Jeffrey; Templin, William D; DeCovich, Nick; Gilk-Baumer, Sara; Gharrett, Anthony J

    2013-01-01

    Low genetic divergence at neutral loci among populations is often the result of high levels of contemporary gene flow. Western Alaskan summer-run chum salmon (Oncorhynchus keta) populations demonstrate weak genetic structure, but invoking contemporary gene flow as the basis for the low divergence is problematic because salmon home to their natal streams and some of the populations are thousands of kilometers apart. We used genotypes from microsatellite and single nucleotide polymorphism loci to investigate alternative explanations for the current genetic structure of chum salmon populations from western Alaska. We also estimated current levels of gene flow among Kuskokwim River populations. Our results suggest that weak genetic structure is best explained by physical connections that occurred after the Holocene Thermal Maximum among the Yukon, Kuskokwim, and Nushagak drainages that allowed gene flow to occur among now distant populations. PMID:23919176

  5. Cholinergic and behavioral neurotoxicity of carbaryl and cadmium to larval rainbow trout (oncorhynchus mykiss)

    USGS Publications Warehouse

    Beauvais, S.L.; Jones, S.B.; Parris, J.T.; Brewer, S.K.; Little, E.E.

    2001-01-01

    Pesticides and heavy metals are common environmental contaminants that can cause neurotoxicity to aquatic organisms, impairing reproduction and survival. Neurotoxic effects of cadmium and carbaryl exposures were estimated in larval rainbow trout (RBT; Oncorhynchus mykiss) using changes in physiological endpoints and correlations with behavioral responses. Following exposures, RBT were videotaped to assess swimming speed. Brain tissue was used to measure cholinesterase (ChE) activity, muscarinic cholinergic receptor (MChR) number, and MChR affinity. ChE activity decreased with increasing concentrations of carbaryl but not of cadmium. MChR were not affected by exposure to either carbaryl or cadmium. Swimming speed correlated with ChE activity in carbaryl-exposed RBT, but no correlation occurred in cadmium-exposed fish. Thus, carbaryl exposure resulted in neurotoxicity reflected by changes in physiological and behavioral parameters measured, while cadmium exposure did not. Correlations between behavior and physiology provide a useful assessment of neurotoxicity. ?? 2001 Academic Press.

  6. Comparative cardiovascular effects of four fishery anesthetics in spinally transected rainbow trout, Oncorhynchus mykiss

    USGS Publications Warehouse

    Fredricks, K.T.; Gingerich, W.H.; Fater, D.C.

    1993-01-01

    1. We compared the effects of four anesthetics on heart rate, dorsal and ventral aortic blood pressure, and electrocardiograms of rainbow trout (Oncorhynchus mykiss). 1. Exposure to the local anesthetics tricaine methanesulfonate (MS-222) and benzocaine hydrochloride (BZH) produced minimal cardiovascular alterations. Mean dorsal aortic pressure (DAP) decreased during exposure to MS-222, and mean DAP and mean ventral aortic pressure (VAP) increased 15% during recovery from BZH. 3. Exposure to the general anesthetic 2-phenoxyethanol (2-PE) or the hypnotic agent etomidate (ET) dramatically decreased heart rate and blood pressures and altered EKG patterns. 4. During recovery, VAP and DAP increased above baseline for an extended period. Heart rate and EKG patterns rapidly returned to normal.

  7. Adult Compacts.

    ERIC Educational Resources Information Center

    Further Education Unit, London (England).

    This bulletin focuses on adult compacts, three-way agreements among employers, potential employees, and trainers to provide the right kind of quality training to meet the employers' requirements. Part 1 is an executive summary of a report of the Adult Compacts Project, which studied three adult compacts in Birmingham and Loughborough, England, and…

  8. Effects of Marine Mammals on Columbia River Salmon Listed under the Endangered Species Act : Recovery Issues for Threatened and Endangered Snake River Salmon : Technical Report 3 of 11.

    SciTech Connect

    Park, Donn L.

    1993-06-01

    Most research on the Columbia and Snake Rivers in recent years has been directed to downstream migrant salmon (Oncorhynchus spp.) losses at dams. Comparatively little attentions has been given to adult losses. Recently an estimated 378,4000 adult salmon and steelhead (O. mykiss) were unaccounted-for from Bonneville Dam to terminal areas upstream. It is now apparent that some of this loss was due to delayed mortality from wounded by marine mammals. This report reviews the recent literature to define predatory effects of marine mammals on Columbia River salmon.

  9. Biological and Physical Inventory of the Streams within the Nez Perce Reservation; Juvenile Steelhead Survey and Factors that Affect Abundance in Selected Streams in the Lower Clearwater River Basin, Idaho, 1983-1984 Final Report.

    SciTech Connect

    Kucera, Paul A.; Johnson, David B.

    1986-08-01

    A biological and physical inventory of selected tributaries in the lower Clearwater River basin was conducted to collect information for the development of alternatives and recommendations for the enhancement of the anadromous fish resources in streams on the Nez Perce Reservation. Five streams within the Reservation were selected for study: Bedrock and Cottonwood Creeks were investigated over a two year period (1983 to 1984) and Big Canyon, Jacks and Mission Creeks were studied for one year (1983). Biological information was collected and analyzed on the density, biomass, production and outmigration of juvenile summer steelhead trout. Physical habitat information was collected on available instream cover, stream discharge, stream velocity, water temperature, bottom substrate, embeddedness and stream width and depth. The report focuses on the relationships between physical stream habitat and juvenile steelhead trout abundance.

  10. Feasibility of Documenting and Estimating Adult Fish Passage at Large Hydroelectric Facilities in the Snake River Using Video Technology; 1993 Final Report.

    SciTech Connect

    Hatch, Douglas R.; Pederson, David R.; Fryer, Jeffrey

    1994-07-01

    Lower Granite Dam on the Snake River to evaluate the feasibility of using video technology to document and estimate fish ladder passage of chinook salmon Oncorhynchus tshawytscha, sockeye salmon O. nerka, and steelhead O. mykiss. A video system was to produced video images during salmon passage periods. A technician identified and counted fish images from the video record. Fish ladder passage estimates of target species made from the video record were similar to estimates made by on-site counters during daytime periods, indicating that the two methods were relatively precise. We also found that a significant percentage (6.4% and 8.3%) of target salmonids migrated during nighttime periods when on-site counts were not typically made during the two years of study. Analysis of the video record permitted verification of individual sockeye salmon identified and counted by on-site count personnel, and provided data useful to managers of this ESA-listed stock. Analysis of the video record also permitted collection of additional data such as length measurements of individual specimens, which was used to regulate a fishery located upstream.

  11. Aquacultured rainbow trout (Oncorhynchus mykiss) possess a large core intestinal microbiota that is resistant to variation in diet and rearing density.

    PubMed

    Wong, Sandi; Waldrop, Thomas; Summerfelt, Steven; Davidson, John; Barrows, Frederic; Kenney, P Brett; Welch, Timothy; Wiens, Gregory D; Snekvik, Kevin; Rawls, John F; Good, Christopher

    2013-08-01

    As global aquaculture fish production continues to expand, an improved understanding of how environmental factors interact in fish health and production is needed. Significant advances have been made toward economical alternatives to costly fishmeal-based diets, such as grain-based formulations, and toward defining the effect of rearing density on fish health and production. Little research, however, has examined the effects of fishmeal- and grain-based diets in combination with alterations in rearing density. Moreover, it is unknown whether interactions between rearing density and diet impact the composition of the fish intestinal microbiota, which might in turn impact fish health and production. We fed aquacultured adult rainbow trout (Oncorhynchus mykiss) fishmeal- or grain-based diets, reared them under high- or low-density conditions for 10 months in a single aquaculture facility, and evaluated individual fish growth, production, fin indices, and intestinal microbiota composition using 16S rRNA gene sequencing. We found that the intestinal microbiotas were dominated by a shared core microbiota consisting of 52 bacterial lineages observed across all individuals, diets, and rearing densities. Variations in diet and rearing density resulted in only minor changes in intestinal microbiota composition despite significant effects of these variables on fish growth, performance, fillet quality, and welfare. Significant interactions between diet and rearing density were observed only in evaluations of fin indices and the relative abundance of the bacterial genus Staphylococcus. These results demonstrate that aquacultured rainbow trout can achieve remarkable consistency in intestinal microbiota composition and suggest the possibility of developing novel aquaculture strategies without overtly altering intestinal microbiota composition. PMID:23770898

  12. Brain acetylcholinesterase activity in shiner perch (Cymatogaster aggregata) and juvenile chinook salmon (Oncorhynchus tshawytscha) after application of carbaryl to control burrowing shrimp within Willapa Bay, Washington.

    PubMed

    Troiano, Alexandra T; King, Kerensa A; Grue, Christian E; Grassley, James M; Ekblad, Cathy J

    2013-11-01

    Carbaryl has been applied in Willapa Bay, Washington, for five decades to control burrowing shrimp (Neotrypaea californiensis and Upogebia pugettensis) on commercial oyster (Crassostrea gigas) beds. Concerns about effects on nontarget species, including fishes, have led to restrictions in use despite a lack of data on in situ exposure. We measured brain acetylcholinesterase (AChE) activity in adult Shiner perch (Cymatogaster aggregata) and juvenile Chinook salmon (Oncorhynchus tshawytscha) after operational applications. We hypothesized that exposure in Shiner perch would be greater than in juvenile Chinook salmon because of their greater site fidelity and benthic foraging. However, Shiner perch exhibited no statistically significant AChE inhibition. Enzyme activity was statistically decreased (≤14 %) in juvenile Chinook salmon after a second spray event; however, inhibition was less than that associated with overt effects and was similar to controls by 48 h after the spray. Diet analyses confirmed that Shiner perch were primarily feeding on benthic invertebrates and that juvenile Chinook salmon were feeding primarily within the water column. Composition of Shiner perch diets and amount of food consumed varied little among channels and time periods; however, Shiner perch on beds consumed more food 6 h after application than those at other time points and locations. There were no consistent differences in the diets of juvenile Chinook salmon within channels among time periods. Results suggest (1) that carbaryl applications pose little hazard to fish in the bay having habitat and dietary preferences similar to those of Shiner perch and juvenile Chinook salmon and (2) that quantification of direct exposure in the field is essential to adequately assess risk. PMID:24042340

  13. Deepwater Spawning of Fall Chinook Salmon (Oncorhynchus tshawtscha) Near Ives and Pierce Island of the Columbia River, 2002-2003 Annual Report.

    SciTech Connect

    Mueller, Robert

    2003-09-01

    Pacific Northwest National Laboratory conducted video-based boat surveys to identify fall chinook salmon (Oncorhynchus tshawytscha) spawning areas located in deep water (>1 m) downstream of Bonneville Dam in the fall of 2002. This report documents the number and extent of chinook salmon spawning near Ives and Pierce Islands of the Columbia River, and is the fourth in a series of reports prepared since 1999. The main objective of this study was to find deepwater spawning locations of fall chinook salmon in the main Columbia River channel, collect additional data on physical habitat parameters at spawning sites, and provide estimates of adult spawners in the surveyed area. The secondary objective was to document the occurrence of any chum salmon (O. keta) redds located in the deeper sections near below Hamilton Creek. There was a significant increase in the number of fall chinook salmon redds found in the locations surveyed during the 2002 surveys when compared to previous surveys by Pacific Northwest National Laboratory. A total of 192 redds were found in two general locations adjacent to Pierce Island (river km 228.5) encompassing an area of approximately 9.31 ha. Peak spawning activity, based on redd counts and live fish seen near redds, was on or near November 15, 2002. An estimated 1,768 fall chinook salmon redds at water depths exceeding {approx}1.m ({approx} 125 kcfs) were documented in 2002. This estimate is the expanded number based on the number of redds found within the pre-defined survey area. Fall chinook salmon redds were found at water depths from 0.9 to 8.5 m and were constructed in gravel to large cobble ranging in size from 4.83 to 13.4 cm in diameter. No chum salmon redds were found in areas surveyed during 2002, although several carcasses were found at the mouth of Woodward Creek and in the deeper sections below Hamilton Creek.

  14. Aquacultured Rainbow Trout (Oncorhynchus mykiss) Possess a Large Core Intestinal Microbiota That Is Resistant to Variation in Diet and Rearing Density

    PubMed Central

    Wong, Sandi; Waldrop, Thomas; Summerfelt, Steven; Davidson, John; Barrows, Frederic; Kenney, P. Brett; Welch, Timothy; Wiens, Gregory D.; Snekvik, Kevin

    2013-01-01

    As global aquaculture fish production continues to expand, an improved understanding of how environmental factors interact in fish health and production is needed. Significant advances have been made toward economical alternatives to costly fishmeal-based diets, such as grain-based formulations, and toward defining the effect of rearing density on fish health and production. Little research, however, has examined the effects of fishmeal- and grain-based diets in combination with alterations in rearing density. Moreover, it is unknown whether interactions between rearing density and diet impact the composition of the fish intestinal microbiota, which might in turn impact fish health and production. We fed aquacultured adult rainbow trout (Oncorhynchus mykiss) fishmeal- or grain-based diets, reared them under high- or low-density conditions for 10 months in a single aquaculture facility, and evaluated individual fish growth, production, fin indices, and intestinal microbiota composition using 16S rRNA gene sequencing. We found that the intestinal microbiotas were dominated by a shared core microbiota consisting of 52 bacterial lineages observed across all individuals, diets, and rearing densities. Variations in diet and rearing density resulted in only minor changes in intestinal microbiota composition despite significant effects of these variables on fish growth, performance, fillet quality, and welfare. Significant interactions between diet and rearing density were observed only in evaluations of fin indices and the relative abundance of the bacterial genus Staphylococcus. These results demonstrate that aquacultured rainbow trout can achieve remarkable consistency in intestinal microbiota composition and suggest the possibility of developing novel aquaculture strategies without overtly altering intestinal microbiota composition. PMID:23770898

  15. Deepwater Spawning of Fall Chinook Salmon (Oncorhynchus Tshawytscha) : Spawning Near Ives and Pierce Island of the Columbia River, 2001 Annual Report.

    SciTech Connect

    Mueller, Robert P.

    2002-10-01

    Pacific Northwest National Laboratory initiated studies to identify potential fall chinook salmon (Oncorhynchus tshawytscha) spawning habitat and assess the extent of spawning in deep water (>1 m) downstream of Bonneville Dam in the fall of 1999. This report provides results from 2001, the third year of our effort. The main objective of this study was to find deepwater spawning locations of fall chinook salmon in the main Columbia River channel, collect additional data on physical habitat parameters at spawning sites, and provide estimates of adult spawners in the area. The secondary objective was to map any chum salmon redds located in the deeper sections near Hamilton Slough. River flows during the spawning surveys in 2001 were lower than in 1999 and 2000. Peak spawning activity, based on redd counts and live fish seen near redds, was on or near November 9, 2001. The location of the spawning area was similar to that of 1999 and 2000. One difference was the majority of redds were found in deeper water (>1.5 m) and closer to the shoreline adjacent to Pierce Island. Because of the low river flows during the fall of 2001, only a handful of redds were found using the boat-deployed video system within Hamilton Slough. No chum salmon (O. keta) redds were found in areas surveyed during 2000. (Note: surveys were limited to deeper sections of Hamilton Slough and near the main river channel.) An estimated 717 fall chinook salmon redds at water depths exceeding 1.5 m ({approx} 125 kcfs) were documented in 2001. These estimates are expanded from the number of redds found within a predefined survey area. Fall chinook salmon redds were found at water depths from 1.5-4.6 m and were located in a general area of {approx} 4.9 ha. Fall chinook salmon redds were constructed in gravels ranging from 3.2-13.4 cm in diameter and water velocities of 0.29-0.70 m/s.

  16. Evaluation of the 2008 Predictions of Run-Timing and Survival of Wild Migrant Yearling Chinook and Steelhead on the Columbia and Snake Rivers.

    SciTech Connect

    Beer, W. Nicholas; Iltis, Susannah; Anderson, James J.

    2009-01-01

    Columbia Basin Research uses the COMPASS model on a daily basis during the outmigration of Snake River Chinook and steelhead smolts to predict downstream passage and survival. Fish arrival predictions and observations from program RealTime along with predicted and observed environmental conditions are used to make in-season predictions of arrival and survival to various dams in the Columbia and Snake Rivers. For 2008, calibrations of travel and survival parameters for two stocks of fish-Snake River yearling PIT-tagged wild chinook salmon (chin1pit) and Snake River PIT-tagged steelhead (lgrStlhd)-were used to model travel and survival of steelhead and chinook stocks from Lower Granite Dam (LWG) or McNary Dam (MCN) to Bonneville Dam (BON). This report summarizes the success of the COMPASS/RealTime process to model these migrations as they occur. We compared model results on timing and survival to data from two sources: stock specific counts at dams and end-of-season control survival estimates (Jim Faulkner, NOAA, pers. comm. Dec. 16, 2008). The difference between the predicted and observed day of median passage and the Mean Absolute Deviation (MAD) between predicted and observed arrival cumulative distributions are measures of timing accuracy. MAD is essentially the average percentage error over the season. The difference between the predicted and observed survivals is a measure of survival accuracy. Model results and timing data were in good agreement from LWG to John Day Dam (JDA). Predictions of median passage days for the chin1pit and lgrStlhd stocks were 0 and 2 days (respectively) later than observed. MAD for chin1pit and lgrStlhd stocks at JDA were 2.3% and 5.9% (respectively). Between JDA and BON modeling and timing data were not as well matched. At BON, median passage predictions were 6 and 10 days later than observed and MAD values were 7.8% and 16.0% respectively. Model results and survival data were in good agreement from LWG to MCN. COMPASS predicted

  17. Therapeutic and prophylactic effects of isometamidium chloride (Samorin) against the hemoflagellate Cryptobia salmositica in chinook salmon (Oncorhynchus tshawytscha) and the effects of the drug on uninfected rainbow trout (O. mykiss).

    PubMed

    Ardelli, B F; Woo, P T

    2001-01-01

    A series of compounds (triphenylmethanes, thiazines, xanthenes, benzidines, phenanthridiniums, napthalamines, and diamidines) were screened for in vitro toxicity against Cryptobia salmositica. Isometamidium chloride (Samorin) was cryptobiacidal at low concentrations and was examined for therapeutic and prophylactic activities against C. salmositica in chinook salmon (Oncorhynchus tshawytscha). An intramuscular dose (1.0 mg/kg) of Samorin 3 weeks post-infection significantly reduced the parasitemia in adult chinook. A higher dose (2.5 mg/kg) eliminated the infection in 30% of adult fish and parasitemias were significantly reduced in the remaining infected fish. Juvenile chinook treated with 1.0 mg Samorin/kg at 2-3 weeks post-infection survived, while 100% of untreated control fish died from cryptobiosis. The high dose (2.5 mg/kg) was lethal to small fish (98.93 +/- 12.09 g) and 50% died within 24 h of treatment, while all large fish (168.38 +/- 13.87 g) survived. Samorin (1.0 mg/kg) did not affect growth, food consumption, complement, or hematocrit values in uninfected rainbow trout (O. mykiss). PMID:11199844

  18. Umatilla River Fish Passage Operations Program, 2000-2001 Annual Report.

    SciTech Connect

    Zimmerman, Brian C.; Duke, Bill B.

    2003-02-01

    Threemile Falls Dam (Threemile Dam), located near the town of Umatilla, is the major collection and counting point for adult salmonids returning to the Umatilla River. Returning salmon and steelhead were enumerated at Threemile Dam from August 17, 2000 to July 7, 2001. A total of 3,662 summer steelhead (Oncorhynchus mykiss); 643 adult, 437 jack, and 4,948 subjack fall chinook (O. tshawytscha); 4,654 adult and 1,276 jack coho (O. kisutch); and 4,382 adult and 185 jack spring chinook (O. tshawytscha) were counted. All fish were enumerated at the east bank facility. Of the fish counted, 14 summer steelhead and 847 adult and 74 jack spring chinook were hauled upstream from Threemile Dam. There were 3,433 summer steelhead; 71 adult, 298 jack and 4,647 subjack fall chinook; 4,435 adult and 1,180 jack coho; and 2,873 adult and 55 jack spring chinook either released at, or allowed to volitionally migrate past, Threemile Dam. In addition, 116 summer steelhead; 565 adult and 38 jack fall chinook; and 646 adult and 31 jack spring chinook were collected for brood. The Westland Canal juvenile facility (Westland), located near the town of Echo at rivermile (RM) 27, is the major collection point for outmigrating juvenile salmonids and steelhead kelts. The canal was open for 147 days between February 5 and July 26, 2001. During that period, fish were bypassed back to the river 127 days and were trapped 18 days. An estimated 350 pounds of juvenile fish were transported from Westland to the Umatilla River boat ramp (RM 0.5). Approximately 92% of the juveniles transported were salmonids. No steelhead kelts were hauled from Westland this year. The Threemile Dam west bank juvenile bypass was open throughout the summer of 2000 and continued to run until October 27, 2000. The bypass was reopened March 8, 2001 and ran until July 9, 2001. The juvenile trap was not operated this year.

  19. Umatilla River Fish Passage Operations Program, 2002-2003 Annual Report.

    SciTech Connect

    Bronson, James P.; Duke, Bill B.

    2004-03-01

    Threemile Falls Dam (Threemile Dam), located near the town of Umatilla, is the major collection and counting point for adult salmonids returning to the Umatilla River. Returning salmon and steelhead were enumerated at Threemile Dam from August 17, 2002 to September 29, 2003. A total of 3,080 summer steelhead (Oncorhynchus mykiss); 1716 adult, 617 jack, and 1,709 subjack fall chinook (O. tshawytscha); 3,820 adult and 971 jack coho (O. kisutch); and 3,607 adult and 135 jack spring chinook (O. tshawytscha) were counted. All fish were enumerated at the east bank facility. Of the fish counted, 6 summer steelhead and 330 adult and 49 jack spring chinook were hauled upstream from Threemile Dam. There were 2,882 summer steelhead; 1161 adult, 509 jack and 1,546 subjack fall chinook; 3,704 adult and 915 jack coho; and 2,406 adult and 31 jack spring chinook either released at, or allowed to volitionally migrate past, Threemile Dam. Also, 109 summer steelhead; 532 adult and 32 jack fall chinook; and 560 adult and 28 jack spring chinook were collected for brood. In addition, 282 spring chinook were collected for the outplanting efforts in the Walla Walla Basin. The Westland Canal juvenile facility (Westland), located near the town of Echo at rivermile (RM) 27, is the major collection point for outmigrating juvenile salmonids and steelhead kelts. The canal was open for 159 days between January 27 and July 4, 2003. During that period, fish were bypassed back to the river 145 days and were trapped 11 days. An estimated 205 pounds of juvenile fish were transported from Westland to the Umatilla River boat ramp (RM 0.5). Approximately 82% of the juveniles transported were salmonids. No steelhead kelts were hauled from Westland this year. The Threemile Dam west bank juvenile bypass was opened on September 16, 2002. and continued until November 1, 2002. The bypass was reopened March 3, 2003 and ran until July 3, 2003. The juvenile trap was operated by the Umatilla Passage Evaluation

  20. Evaluation of angler effort and harvest of rainbow trout (Oncorhynchus mykiss), Lake Scanewa, Washington, 2010

    USGS Publications Warehouse

    Liedtke, Theresa L.; Kock, Tobias J.; Ekstrom, Brian K.; Tomka, Ryan G.; Rondorf, Dennis W.

    2011-01-01

    A creel evaluation was conducted in Lake Scanewa, a reservoir on the Cowlitz River, to monitor catch rates of rainbow trout (Oncorhynchus mykiss) and determine if the trout fishery was having negative impacts on juvenile anadromous salmon (Oncorhynchus spp.) in the system. The trout fishery, which is supported by releases of 20,000 fish (2 fish per pound) per year from June to August, was developed to mitigate for the construction of the Cowlitz Falls Dam in 1994. The trout fishery has a target catch rate of at least 0.50 fish per hour. Interviews with 1,214 anglers during the creel evaluation found that most anglers targeted rainbow trout (52 percent) or Chinook and coho salmon (48 percent). The interviewed anglers caught a total of 1,866 fish, most of which were rainbow trout (1,213 fish; 78 percent) or coho salmon (311 fish; 20 percent). We estimated that anglers spent 17,365 hours fishing in Lake Scanewa from June to November 2010. Catch rates for boat anglers (1.39 fish per hour) exceeded the 0.50 fish per hour target, whereas catch rates for shore anglers (0.35 fish per hour) fell short of the goal. The combined catch rates for all trout anglers in the reservoir were 0.96 fish per hour. We estimated that anglers harvested 7,584 (95 percent confidence interval = 2,795-12,372 fish) rainbow trout during the study period and boat anglers caught more fish than shore anglers (5,975 and 1,609 fish, respectively). This estimate suggests that more than 12,000 of the 20,000 rainbow trout released into Lake Scanewa during 2010 were not harvested, and could negatively impact juvenile salmon in the reservoir through predation or competition. We examined 1,236 stomach samples from rainbow trout and found that 2.1 percent (26 fish) of these samples contained juvenile fish. Large trout (greater than 300 millimeters) had a higher incidence of predation than small trout (less than 300 millimeters; 8.50 and 0.06 percent, respectively). A total of 39 fish were found in rainbow

  1. Abundance, Behavior, and Habitat Utilization by Coho Salmon and Steelhead Trout in Fish Creek, Oregon, as Influenced by Habitat Enhancement, 1985 Annual Report.

    SciTech Connect

    Wolfe, John; Everest, Fred H.; Heller, David A.

    1986-09-01

    Construction and evaluation of salmonid habitat improvements on Fish Creek, a tributary of the upper Clackamas River, was continued in fiscal year 1985 by the Estacada Ranger District, Mt. Hood National Forest, and the Anadromous Fish Habitat Research Unit of the Pacific Northwest Forest and Range Experiment Station (PNW), USDA Forest Service. The study began in 1982 when PNW entered into an agreement with the Mt. Hood National Forest to evaluate fish habitat improvements in the Fish Creek basin on the Estacada Ranger District. The project was initially conceived as a 5-year effort (19824986) to be financed by Forest Service funds. Several factors limiting production of salmonids in the basin were identified during the first year of the study, and the scope of the habitat improvement effort was subsequently enlarged. The habitat improvement program and the evaluation of improvements were both expanded in mid-1983 when the Bonneville Power Administration entered into an agreement with the Mt. Hood National Forest to provide additional funding for work on Fish Creek. Habitat improvement work in the basin is designed to increase the annual number of chinook and coho salmon, and steelhead trout smolt outmigrants. The primary objectives of the evaluation include the: (1) Evaluation and quantification of changes in salmonid spawning and rearing habitat resulting from a variety of habitat Improvements. (2) Evaluation and quantification of changes in fish populations and biomass resulting from habitat improvements. (3) Evaluation of the cost-effectiveness of habitat improvements developed with BPA and Forest Service funds on Fish Creek. Several prototype enhancement projects were constructed and tested during the first three years of the study. The Intention was to identify successful techniques that could then be broadly applied within the bash. This stepwise procedure has been largely successful in identifying the most promising enhancement techniques for the Fish Creek

  2. Urinary tract infection - adults

    MedlinePlus

    Bladder infection - adults; UTI - adults; Cystitis - bacterial - adults; Pyelonephritis - adults; Kidney infection - adults ... to the hospital if you: Are an older adult Have kidney stones or changes in the anatomy ...

  3. Umatilla Hatchery Satellite Facilities Operation and Maintenance; 1996 Annual Report.

    SciTech Connect

    Rowan, Gerald D.

    1997-06-01

    The Confederated Tribes of the Umatilla Indian Reservation (CTUIR) and Oregon Department of Fish and Wildlife (ODFW) are cooperating in a joint effort to enhance steelhead and re-establish salmon runs in the Umatilla River Basin. As an integral part of this program, Bonifer Pond, Minthorn Springs, Imeques C-mem-ini-kem and Thornhollow satellite facilities are operated for acclimation and release of juvenile summer steelhead (Oncorhynchus mykiss), fall and spring chinook salmon (O. tshawytscha) and coho salmon (O. kisutch). Minthorn is also used for holding and spawning adult summer steelhead and Three Mile Dam is used for holding and spawning adult fall chinook and coho salmon. Bonifer, Minthorn, Imeques and Thornhollow facilities are operated for acclimation and release of juvenile salmon and summer steelhead. The main goal of acclimation is to reduce stress from trucking prior to release and improve imprinting of juvenile salmonids in the Umatilla River Basin. Juveniles are transported to the acclimation facilities primarily from Umatilla and Bonneville Hatcheries. This report details activities associated with operation and maintenance of the Bonifer, Minthorn, Imeques, Thornhollow and Three Mile Dam facilities in 1996.

  4. Determination of Swimming Speeds and Energetic Demands of Upriver Migrating Fall Chinook Salmon (Oncorhynchus Tshawytscha) in the Klickitat River, Washington.

    SciTech Connect

    Brown, Richard S.; Geist, David R.; Confederated Tribes and Bands of the Yakama Nation, Washington

    2002-08-30

    This report describes a study conducted by Pacific Northwest National Laboratory for the Bonneville Power Administration's Columbia Basin Fish and Wildlife Program during the fall of 2001. The objective was to study the migration and energy use of adult fall chinook salmon (Oncorhynchus tshawytscha) traveling up the Klickitat River to spawn. The salmon were tagged with either surgically implanted electromyogram (EMG) transmitters or gastrically implanted coded transmitters and were monitored with mobile and stationary receivers. Swim speed and aerobic and anaerobic energy use were determined for the fish as they attempted passage of three waterfalls on the lower Klickitat River and as they traversed free-flowing stretches between, below, and above the falls. Of the 35 EMG-tagged fish released near the mouth of the Klickitat River, 40% passed the first falls, 24% passed the second falls, and 20% made it to Lyle Falls. None of the EMG-tagged fish were able to pass Lyle Falls, either over the falls or via a fishway at Lyle Falls. Mean swimming speeds ranged from as low as 52.6 centimeters per second (cm s{sup -1}) between falls to as high as 189 (cm s{sup -1}) at falls passage. Fish swam above critical swimming speeds while passing the falls more often than while swimming between the falls (58.9% versus 1.7% of the transmitter signals). However, fish expended more energy swimming the stretches between the falls than during actual falls passage (100.7 to 128.2 kilocalories [kcals] to traverse areas between or below falls versus 0.3 to 1.0 kcals to pass falls). Relationships between sex, length, and time of day on the success of falls passage were also examined. Average swimming speeds were highest during the day in all areas except at some waterfalls. There was no apparent relationship between either fish condition or length and successful passage of waterfalls in the lower Klickitat River. Female fall chinook salmon, however, had a much lower likelihood of passing

  5. Walla Walla River Fish Passage Operations Program, 2004-2005 Annual Report.

    SciTech Connect

    Bronson, James P.; Duke, Bill B.

    2006-02-01

    In the late 1990s, the Confederated Tribes of the Umatilla Indian Reservation, Oregon Department of Fish and Wildlife, and Washington Department of Fish and Wildlife, along with many other agencies, began implementing fisheries restoration activities in the Walla Walla Basin. An integral part of these efforts is to alleviate the inadequate fish migration conditions in the basin. The migration concerns are being addressed by removing diversion structures, constructing fish passage facilities, implementing minimum instream flow requirements, and providing trap and haul efforts when needed. The objective of the Walla Walla River Fish Passage Operations Project is to increase the survival of migrating adult and juvenile salmonids in the Walla Walla River basin. The project is responsible for coordinating operation and maintenance of ladders, screen sites, bypasses, trap facilities, and transportation equipment. In addition, the project provides technical input on passage criteria and passage and trapping facility design and operation. Operation of the various passage facilities and passage criteria guidelines are outlined in an annual operations plan that the project develops. During the 2004-2005 project year, there were 590 adult summer steelhead, 31 summer steelhead kelts (Oncorhynchus mykiss), 70 adult bull trout (Salvelinus confluentus); 80 adult and 1 jack spring Chinook (O. tshawytscha) enumerated at the Nursery Bridge Dam fishway video counting window between December 13, 2004, and June 16, 2005. Summer steelhead and spring chinook were observed moving upstream while bull trout were observed moving both upstream and downstream of the facility. In addition, the old ladder trap was operated by ODFW in order to enumerate fish passage. Of the total, 143 adult summer steelhead and 15 summer steelhead kelts were enumerated at the west ladder at Nursery Bridge Dam during the video efforts between February 4 and May 23, 2005. Operation of the Little Walla Walla River

  6. Reduction in swimming performance in juvenile rainbow trout (Oncorhynchus mykiss) following sublethal exposure to pyrethroid insecticides.

    PubMed

    Goulding, Adam T; Shelley, Lesley K; Ross, Peter S; Kennedy, Christopher J

    2013-04-01

    While the lethal toxicity of pyrethroid insecticides to fish is well documented, their sublethal physio-behavioral effects remain poorly characterized. Known pyrethroid-associated changes to insect neuromuscular function may translate into similar effects in fish, thereby altering swimming ability and affecting foraging, predator avoidance, and migration. Three experiments were conducted using critical (Ucrit) and burst (Umax) swimming speeds to assess the sublethal effects of the pyrethroids permethrin and deltamethrin in juvenile rainbow trout (Oncorhynchus mykiss). Fish were exposed to deltamethrin (100, 200, or 300 ng/L) or permethrin (1, 2, or 3 μg/L) in water for 4 d, and assessed for swimming performance. Deltamethrin (200 and 300 ng/L) reduced Ucrit, but not Umax, while both swim performance measurements were unaffected by permethrin. Subsequent experiments used only Ucrit to assess deltamethrin exposure. In a time course experiment, deltamethrin (300 ng/L) reduced Ucrit after 1 and 4 d of exposure, but after 7 d of exposure Ucrit was fully recovered. Finally, deltamethrin (1, 2, or 3 μg/L) reduced Ucrit after 1h bath exposures similar to recommended protocols for deltamethrin based sea-lice treatment in aquaculture. The real-world implications of the revealed pyrethroid-associated swimming ability reductions in salmon may be important in areas close to aquaculture facilities. PMID:23318297

  7. [Food effects on some reproductive aspects of rainbow trout, Oncorhynchus mykiss, in a Venezuelan fish farm].

    PubMed

    Bastardo, H

    1999-12-01

    Samples of rainbow trout, Oncorhynchus mykiss, were fed with three different dried diets, labeled D1, D2 and D3, the first ones were expanded and the last one pelleted type food. Their protein content ranged from 36% to 42%, and only D1 diet presented a pigment in its composition. The gonodasomatic index (GSI) as well as the gonadial development showed a different behavior in males and females for all the samples tested. A continuous sperm production was observed in males fish, while in female fish the GSI showed a tendency to increase through the whole study, and they showed a reproductive rest period on july 92. Fish relative fecundity and egg diameter were similar in all cases. The gonodial maduration age was shorter for the female that were fed with D1 and D2, while the 50% of the trout population that got D3 had a gonodial maduration period two months longer. For all trouts tested the fertility was low with a maximum value of 49%. The hatchery from the tested trouts with D2 intakes had a mortality value of 62%. Meanwhile, those with D1 and D3 intakes showed mortality values of 36% and 43% respectively. PMID:10883303

  8. Multiple biomarkers responses in juvenile rainbow trout, Oncorhynchus mykiss, after acute exposure to a fungicide propiconazole.

    PubMed

    Li, Zhi-Hua; Zlabek, Vladimir; Velisek, Josef; Grabic, Roman; Machova, Jana; Kolarova, Jitka; Li, Ping; Randak, Tomas

    2013-03-01

    In this study, the toxic effects of propiconazole (PCZ), a triazole fungicide present in aquatic environment, were studied in juvenile rainbow trout, Oncorhynchus mykiss, by acute toxicity test with the concentration of 5.04 mg/L (96 h LC50). Morphological indices, hematological parameters, liver xenobiotic-metabolizing response, and tissue antioxidant status were evaluated. Compared with the control group, fish exposed to PCZ showed significantly higher Leuko, PCV, MCHC, and hepatic EROD, and significantly lower MCV. CF and HSI were not significantly different among groups. SOD, CAT, GPx, and GR activities increased significantly in liver of experimental groups, but decreased significantly in gill. In general, antioxidant enzyme activity in intestine was less evident than in liver. Oxidative stress indices (levels of LPO and CP) were significantly higher in gill. Additionally, through chemometrics of all parameters measured in this study, two groups with 67.29% of total accumulated variance were distinguished. In short, the physiological and biochemical responses in different tissues of fish indicated that PCZ-induced the stressful environmental conditions. But according to PCZ residual status in the natural environment, more long-term experiments at lower concentrations will be necessary in the future. © 2011 Wiley Periodicals, Inc. Environ Toxicol, 2013. PMID:21384499

  9. Relative sensitivity of bull trout (Salvelinus confluentus) and rainbow trout (Oncorhynchus mykiss) to acute copper toxicity.

    PubMed

    Hansen, James A; Lipton, Josh; Welsh, Paul G

    2002-03-01

    Bull trout (Salvelinus confluentus) were recently listed as threatened in the United States under the federal Endangered Species Act. Past and present habitat for this species includes waterways contaminated with heavy metals released from mining activities. Because the sensitivity of this species to copper was previously unknown, we conducted acute copper toxicity tests with bull and rainbow trout (Oncorhynchus mykiss) in side-by-side comparison tests. Bioassays were conducted using water at two temperatures (8 degrees C and 16 degrees C) and two hardness levels (100 and 220 mg/L as CaCO3). At a water hardness of 100 mg/L, both species were less sensitive to copper when tested at 16 degrees C compared to 8 degrees C. The two species had similar sensitivity to copper in 100-mg/ L hardness water, but bull trout were 2.5 to 4 times less sensitive than rainbow trout in 220-mg/L hardness water. However, when our results were viewed in the context of the broader literature on rainbow trout sensitivity to copper, the sensitivities of the two species appeared similar. This suggests that adoption of toxicity thresholds that are protective of rainbow trout would be protective of bull trout; however, an additional safety factor may be warranted because of the additional level of protection necessary for this federally threatened species. PMID:11878477

  10. Staphylococcus warneri, a resident skin commensal of rainbow trout (Oncorhynchus mykiss) with pathobiont characteristics

    PubMed Central

    Rami, Musharrafieh; Luca, Tacchi; Joshua, Trujeque; Scott, LaPatra; Irene, Salinas

    2014-01-01

    Commensal microorganisms live in association with the mucosal surfaces of all vertebrates. The skin of teleost fish is known to harbor commensals. In this study we report for the first time the presence of an intracellular Gram positive bacteria, Staphylococcus warneri that resides in the skin epidermis of rainbow trout (Oncorhynchus mykiss). S. warneri was isolated from healthy hatchery trout skin epithelial cells. In situ hybridization confirmed the intracellular nature of the bacterium. Skin explants exposed in vitro to S. warneri or the extracellular pathogen Vibrio anguillarum show that S. warneri is able to induce an anti-inflammatory cytokine status via TGF-β 1b compared to the pro-inflammatory responses (IL-1β , IL-6 and TNF-α) elicited by V. anguillarum. In vivo experiments showed that S. warneri is not pathogenic to rainbow trout when injected intraperitoneally at high concentrations. However, S. warneri is able to stimulate V. anguillarum growth and biofilm formation on rainbow trout scales. Our results demonstrate that rainbow trout skin commensals such as S. warneri have the potential to become indirect pathobionts by enhancing growth and biofilm formation of pathogens such as V. anguillarum. These results show that fish farming practices (i.e. handling and other manipulations) can alter the skin microbiota and compromise the skin health of rainbow trout. PMID:24438987

  11. 5-Hydroxytryptamine-induced calcium-channel gating in rainbow trout (Oncorhynchus mykiss) peripheral blood lymphocytes.

    PubMed Central

    Ferriere, F; Khan, N A; Meyniel, J P; Deschaux, P

    1997-01-01

    The present study was conducted on peripheral blood lympho-cytes of rainbow trout (Oncorhynchus mykiss) to assess the role of 5-hydroxytryptamine (5-HT; 'serotonin') in calcium signalling. 5-HT-induced increases in intracellular free calcium concentrations, [Ca2+]i, and its action was mediated by 5-HT receptor subtype 3 (5-HT3), but not by 5-HT receptor subtype 1A (5-HT1A) or subtype 2 (5-HT2) in these cells. In Ca2+-containing medium (1 mM CaCl2), 5-HT and 2-methyl-5-HT (5-HT3 receptor agonist) induced increases in [Ca2+]i, whereas in Ca2+-free medium (0 Ca2+, 1 mM EGTA), these two agents failed to evoke increases in [Ca2+]i in these cells, demonstrating that 5-HT mobilizes Ca2+ from the extracellular environment. Furthermore, 5-HT-induced increases in [Ca2+]i are not contributed to by the intracellular endoplasmic reticulum (ER) pool, as thapsigargin, an agent that recruits Ca2+ from ER stores, had additive effects on 5-HT-induced [Ca2+]i responses in fish peripheral lymphocytes. 5-HT-induced increases in [Ca2+]i were mediated by 5-HT3 receptors via gating the calcium through L-type, but not N-type, calcium channels in trout lymphocytes. PMID:9173890

  12. Migration timing of female kokanee salmon Oncorhynchus nerka: diel patterns and effects of maturation state.

    PubMed

    Warren, M A; Morbey, Y E

    2012-09-01

    Diel patterns of migration and migration speed were compared between reproductive timing phenotypes in female kokanee salmon Oncorhynchus nerka. Females of varying degrees of reproductive maturation were captured on their migration route to the Meadow Creek Spawning Channel (British Columbia, Canada), were tagged with passive-integrated transponders (PIT tags) and were subsequently monitored with stationary receivers. Females showed crepuscular migration timing, with approximately equal detections at dawn and dusk. In particular, peaks of movement were associated with the appearance of the sun over the mountains in the east and the disappearance of the sun over the mountains in the west. Over 25 m, migration speed was 1·0 body lengths (measured as fork length; L(F)) s(-1) and did not depend on maturation state. Over 3 km, migration speed was much slower (0·2-0·3 L(F) s(-1)) than over the short distance, with less mature females migrating more slowly than more mature females. Less mature females appeared to be in less of a hurry to reach breeding areas compared with more mature females. PMID:22957867

  13. Recovery of Barotrauma Injuries in Chinook Salmon, Oncorhynchus tshawytscha from Exposure to Pile Driving Sound

    PubMed Central

    Casper, Brandon M.; Popper, Arthur N.; Matthews, Frazer; Carlson, Thomas J.; Halvorsen, Michele B.

    2012-01-01

    Juvenile Chinook salmon, Oncorhynchus tshawytscha, were exposed to simulated high intensity pile driving signals to evaluate their ability to recover from barotrauma injuries. Fish were exposed to one of two cumulative sound exposure levels for 960 pile strikes (217 or 210 dB re 1 µPa2·s SELcum; single strike sound exposure levels of 187 or 180 dB re 1 µPa2⋅s SELss respectively). This was followed by an immediate assessment of injuries, or assessment 2, 5, or 10 days post-exposure. There were no observed mortalities from the pile driving sound exposure. Fish exposed to 217 dB re 1 µPa2·s SELcum displayed evidence of healing from injuries as post-exposure time increased. Fish exposed to 210 dB re 1 µPa2·s SELcum sustained minimal injuries that were not significantly different from control fish at days 0, 2, and 10. The exposure to 210 dB re 1 µPa2·s SELcum replicated the findings in a previous study that defined this level as the threshold for onset of injury. Furthermore, these data support the hypothesis that one or two Mild injuries resulting from pile driving exposure are unlikely to affect the survival of the exposed animals, at least in a laboratory environment. PMID:22745794

  14. Development and pharmacokinetic evaluation of erythromycin lipidic formulations for oral administration in rainbow trout (Oncorhynchus mykiss).

    PubMed

    Serdoz, Francesca; Voinovich, Dario; Perissutti, Beatrice; Grabnar, Iztok; Hasa, Dritan; Ballestrazzi, Rodolfo; Coni, Ettore; Pellegrini, Enrico