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Sample records for aerosol spectrometer cas

  1. Determination of aerosol ammonium using an aerodyne aerosol mass spectrometer

    NASA Astrophysics Data System (ADS)

    Delia, A. E.; Toohey, D. W.; Worsnop, D. R.

    2003-04-01

    The chemical composition of fine aerosols is a significant issue both because it influences the chemical and radiative properties of the aerosols, which in turn impact the regional and global climate and human health, and because it is difficult to measure accurately. The Aerosol Mass Spectrometer (AMS) developed by Aerodyne Research measures both chemical composition and aerodynamic size of submicron aerosols quantitatively. However, the measurement of aerosol ammonium is more difficult than that of the other major inorganic species, nitrate and sulfate, because of interferences in the mass spectrum from air and water. This presentation will describe the successful procedure developed for dealing with these interferences and accurately determining the ammonium mass. In addition, the application of this procedure to aerosols from a range of ambient conditions will be demonstrated using data from several field studies.

  2. Synchronised Aerosol Mass Spectrometer Measurements across Europe

    NASA Astrophysics Data System (ADS)

    Nemitz, Eiko

    2010-05-01

    Up to twelve Aerodyne Aerosol Mass Spectrometers (AMSs) were operated simultaneously at rural and background stations (EMEP and EUSAAR sites) across Europe. Measurements took place during three intensive periods, in collaboration between the European EUCAARI IP and the EMEP monitoring activities under the UNECE Convention for Long-Range Transboundary Air Pollution (CLRTAP) during three contrasting months (May 2008, Sep/Oct 2008, Feb/Mar 2009). These measurements were conducted, analysed and quality controlled carefully using a unified protocol, providing the largest spatial database of aerosol chemical composition measured with a unified online technique to date, and a unique snapshots of the European non-refractory submicron aerosol climatology. As campaign averages over all active monitoring sites, organics represent 28 to 43%, sulphate 18 to 25%, ammonium 13 to 15% and nitrate 15 to 36% of the resolved aerosol mass, with the highest relative nitrate contribution during the Feb/Mar campaign. The measurements demonstrate that in NW Europe (e.g. Ireland, UK, The Netherlands, Germany, Switzerland) the regional submicron aerosol tends to be neutralised and here nitrates make a major contribution to the aerosol mass. By contrast, periods with low nitrate and acidic aerosol were observed at sites in S and E Europe (e.g. Greece, Finland), presumably due to a combination of larger SO2 point sources in Easter Europe, smaller local NH3 sources and, in the case of Greece, higher temperatures. While at the more marine and remote sites (Ireland, Scotland, Finland) nitrate concentrations were dominated by episodic transport phenomena, at continental sites (Switzerland, Germany, Hungary) nitrate followed a clear diurnal cycle, reflecting the thermodynamic behaviour of ammonium nitrate. The datasets clearly shows spatially co-ordinated, large-scale pollution episodes of organics, sulphate and nitrate, the latter being most pronounced during the Feb/Mar campaign. At selected

  3. Aerosol beam-focus laser-induced plasma spectrometer device

    DOEpatents

    Cheng, Meng-Dawn

    2002-01-01

    An apparatus for detecting elements in an aerosol includes an aerosol beam focuser for concentrating aerosol into an aerosol beam; a laser for directing a laser beam into the aerosol beam to form a plasma; a detection device that detects a wavelength of a light emission caused by the formation of the plasma. The detection device can be a spectrometer having at least one grating and a gated intensified charge-coupled device. The apparatus may also include a processor that correlates the wavelength of the light emission caused by the formation of the plasma with an identity of an element that corresponds to the wavelength. Furthermore, the apparatus can also include an aerosol generator for forming an aerosol beam from bulk materials. A method for detecting elements in an aerosol is also disclosed.

  4. A balloon-borne aerosol spectrometer for high altitude low aerosol concentration measurements

    SciTech Connect

    Brown, G.S. ); Weiss, R.E. )

    1990-08-01

    Funded by Air Force Wright Aeronautical Laboratory, a new balloon-borne high altitude aerosol spectrometer, for the measurement of cirrus cloud ice crystals, has been developed and successfully flown by Sandia National Laboratories and Radiance Research. This report (1) details the aerosol spectrometer design and construction, (2) discusses data transmission and decoding, (3) presents data collected on three Florida flights in tables and plots. 2 refs., 11 figs., 3 tabs.

  5. Development of Portable Aerosol Mobility Spectrometer for Personal and Mobile Aerosol Measurement

    PubMed Central

    Kulkarni, Pramod; Qi, Chaolong; Fukushima, Nobuhiko

    2017-01-01

    We describe development of a Portable Aerosol Mobility Spectrometer (PAMS) for size distribution measurement of submicrometer aerosol. The spectrometer is designed for use in personal or mobile aerosol characterization studies and measures approximately 22.5 × 22.5 × 15 cm and weighs about 4.5 kg including the battery. PAMS uses electrical mobility technique to measure number-weighted particle size distribution of aerosol in the 10–855 nm range. Aerosol particles are electrically charged using a dual-corona bipolar corona charger, followed by classification in a cylindrical miniature differential mobility analyzer. A condensation particle counter is used to detect and count particles. The mobility classifier was operated at an aerosol flow rate of 0.05 L/min, and at two different user-selectable sheath flows of 0.2 L/min (for wider size range 15–855 nm) and 0.4 L/min (for higher size resolution over the size range of 10.6–436 nm). The instrument was operated in voltage stepping mode to retrieve the size distribution, which took approximately 1–2 minutes, depending on the configuration. Sizing accuracy and resolution were probed and found to be within the 25% limit of NIOSH criterion for direct-reading instruments (NIOSH 2012). Comparison of size distribution measurements from PAMS and other commercial mobility spectrometers showed good agreement. The instrument offers unique measurement capability for on-person or mobile size distribution measurements of ultrafine and nanoparticle aerosol.

  6. Co-Alignment System (CAS) study. Report on task 1-3. [Solar Extreme Ultraviolet Telescope and Spectrometer pointing system

    NASA Technical Reports Server (NTRS)

    Anderson, N. T.

    1980-01-01

    The design of a suitable coalignment system (CAS) for the Solar Extreme Ultraviolet Telescope and Spectrometer (SEUTS) is presented. The CAS provides offset adjustment capabilities to SEUTS which will be mounted on a single large pointing system with other devices. The suitability of existing designs is determined and modifications are suggested.

  7. Automated aerosol Raman spectrometer for semi-continuous sampling of atmospheric aerosol

    NASA Astrophysics Data System (ADS)

    Doughty, David C.; Hill, Steven C.

    2017-02-01

    Raman spectroscopy (RS) is useful in characterizing atmospheric aerosol. It is not commonly used in studying ambient particles partly because automated instrumentation for aerosol RS has not been available. Battelle (Columbus, Ohio, USA) has developed the Resource Effective Bioidentification System (REBS) for automated detection of airborne bioagents based on RS. We use a version of the REBS that measures Raman spectra of one set of particles while the next set of particles is collected from air, then moves the newly collected particles to the analysis region and repeats. Here we investigate the use of the REBS as the core of a general-purpose automated Aerosol Raman Spectrometer (ARS) for atmospheric applications. This REBS-based ARS can be operated as a line-scanning Raman imaging spectrometer. Spectra measured by this ARS for single particles made of polystyrene, black carbon, and several other materials are clearly distinguishable. Raman spectra from a 15 min ambient sample (approximately 35-50 particles, 158 spectra) were analyzed using a hierarchical clustering method to find that the cluster spectra are consistent with soot, inorganic aerosol, and other organic compounds. The ARS ran unattended, collecting atmospheric aerosol and measuring spectra for a 7 hr period at 15-min intervals. A total of 32,718 spectra were measured; 5892 exceeded a threshold and were clustered during this time. The number of particles exhibiting the D-G bands of amorphous carbon plotted vs time (at 15-min intervals) increases during the morning commute, then decreases. This data illustrates the potential of the ARS to measure thousands of time resolved aerosol Raman spectra in the ambient atmosphere over the course of several hours. The capability of this ARS for automated measurements of Raman spectra should lead to more extensive RS-based studies of atmospheric aerosols.

  8. Airborne Coarse Mode Aerosol Measurements with the CAS-DPOL Instrument: Effects of Particle Shape and Refractive Index and Implications for Radiative Transfer Estimate

    NASA Astrophysics Data System (ADS)

    Sauer, D. N.; Weinzierl, B.; Gasteiger, J.; Spanu, A.; Freudenthaler, V.; Gross, S.

    2015-12-01

    Each year huge amounts of mineral dust are mobilized in deserts and arid regions of the world and transported over large distances forming thick elevated aerosol layers with a substantial fraction of coarse mode particles. Optical properties of mineral dust, including the absorptive refractive index of some components, cause a significant effect on the atmospheric radiative energy balance from optical to infrared wavelengths. The aerosol characteristics, in particular its coarse mode size distribution, are modified during long-range transport by aging and deposition processes. This also affects the aerosol optical properties and therefore the effect on the atmospheric radiative energy budget. In-situ measurements of aerosol microphysical properties are essential to characterize those effects in order to be implemented in global climate models in parametrized form. However, in-situ measurements of airborne coarse mode aerosols such as mineral dust and volcanic ash are challenging and the measurements are usually affected by substantial uncertainties. In this work we use airborne measurements of mineral dust from our optical light-scattering spectrometer CAS-DPOL during SALTRACE 2013 to discuss the analysis of such data. We cover the effects of varying refractive index and particle shapes and develop recommendations for the configuration of the CAS-DPOL for aerosol studies. We also present an inversion method to derive coarse mode size distributions from light-scattering probes for mixtures of non-spherical, absorbing aerosols. The size distributions retrieved from the in-situ measurements are then validated using an independent analysis with a combination of sun-photometer and lidar data. We apply these methods to investigate the Saharan mineral dust particle size distributions measured on both sides of the Atlantic Ocean and discuss the influence of aerosol aging on the atmospheric radiative energy budget. With this example we also assess how the uncertainties

  9. Atmospheric pressure flow reactor / aerosol mass spectrometer studies of tropospheric aerosol nucleat and growth kinetics. Final report, June, 2001

    SciTech Connect

    Worsnop, Douglas R.

    2001-06-01

    The objective of this program was to determine the mechanisms and rates of growth and transformation and growth processes that control secondary aerosol particles in both the clear and polluted troposphere. The experimental plan coupled an aerosol mass spectrometer (AMS) with a chemical ionization mass spectrometer to provide simultaneous measurement of condensed and particle phases. The first task investigated the kinetics of tropospheric particle growth and transformation by measuring vapor accretion to particles (uptake coefficients, including mass accommodation coefficients and heterogeneous reaction rate coefficients). Other work initiated investigation of aerosol nucleation processes by monitoring the appearance of submicron particles with the AMS as a function of precursor gas concentrations. Three projects were investigated during the program: (1) Ozonolysis of oleic acid aerosols as model of chemical reactivity of secondary organic aerosol; (2) Activation of soot particles by measurement deliquescence in the presence of sulfuric acid and water vapor; (3) Controlled nucleation and growth of sulfuric acid aerosols.

  10. Light extinction by Secondary Organic Aerosol: an intercomparison of three broadband cavity spectrometers

    NASA Astrophysics Data System (ADS)

    Varma, R. M.; Ball, S. M.; Brauers, T.; Dorn, H.-P.; Heitmann, U.; Jones, R. L.; Platt, U.; Pöhler, D.; Ruth, A. A.; Shillings, A. J. L.; Thieser, J.; Wahner, A.; Venables, D. S.

    2013-07-01

    Broadband optical cavity spectrometers are maturing as a technology for trace gas detection, but only recently have they been used to retrieve the extinction coefficient of aerosols. Sensitive broadband extinction measurements allow explicit separation of gas and particle phase spectral contributions, as well as continuous spectral measurements of aerosol extinction in favourable cases. In this work, we report an intercomparison study of the aerosol extinction coefficients measured by three such instruments: a broadband cavity ring-down spectrometer (BBCRDS), a cavity-enhanced differential optical absorption spectrometer (CE-DOAS), and an incoherent broadband cavity-enhanced absorption spectrometer (IBBCEAS). Experiments were carried out in the SAPHIR atmospheric simulation chamber as part of the NO3Comp campaign to compare the measurement capabilities of NO3 and N2O5 instrumentation. Aerosol extinction coefficients between 655 and 690 nm are reported for secondary organic aerosols (SOA) formed by the NO3 oxidation of β-pinene under dry and humid conditions. Despite different measurement approaches and spectral analysis procedures, the three instruments retrieved aerosol extinction coefficients that were in close agreement. The refractive index of SOA formed from the β-pinene + NO3 reaction was 1.61, and was not measurably affected by the chamber humidity or by aging of the aerosol over several hours. This refractive index is significantly larger than SOA refractive indices observed in other studies of OH and ozone-initiated terpene oxidations, and may be caused by the large proportion of organic nitrates in the particle phase. In an experiment involving ammonium sulphate particles the aerosol extinction coefficients as measured by IBBCEAS were found to be in reasonable agreement with those calculated using Mie theory. The results of the study demonstrate the potential of broadband cavity spectrometers for determining the optical properties of aerosols.

  11. Light extinction by secondary organic aerosol: an intercomparison of three broadband cavity spectrometers

    NASA Astrophysics Data System (ADS)

    Varma, R. M.; Ball, S. M.; Brauers, T.; Dorn, H.-P.; Heitmann, U.; Jones, R. L.; Platt, U.; Pöhler, D.; Ruth, A. A.; Shillings, A. J. L.; Thieser, J.; Wahner, A.; Venables, D. S.

    2013-11-01

    Broadband optical cavity spectrometers are maturing as a technology for trace-gas detection, but only recently have they been used to retrieve the extinction coefficient of aerosols. Sensitive broadband extinction measurements allow explicit separation of gas and particle phase spectral contributions, as well as continuous spectral measurements of aerosol extinction in favourable cases. In this work, we report an intercomparison study of the aerosol extinction coefficients measured by three such instruments: a broadband cavity ring-down spectrometer (BBCRDS), a cavity-enhanced differential optical absorption spectrometer (CE-DOAS), and an incoherent broadband cavity-enhanced absorption spectrometer (IBBCEAS). Experiments were carried out in the SAPHIR atmospheric simulation chamber as part of the NO3Comp campaign to compare the measurement capabilities of NO3 and N2O5 instrumentation. Aerosol extinction coefficients between 655 and 690 nm are reported for secondary organic aerosols (SOA) formed by the NO3 oxidation of β-pinene under dry and humid conditions. Despite different measurement approaches and spectral analysis procedures, the three instruments retrieved aerosol extinction coefficients that were in close agreement. The refractive index of SOA formed from the β-pinene + NO3 reaction was 1.61, and was not measurably affected by the chamber humidity or by aging of the aerosol over several hours. This refractive index is significantly larger than SOA refractive indices observed in other studies of OH and ozone-initiated terpene oxidations, and may be caused by the large proportion of organic nitrates in the particle phase. In an experiment involving ammonium sulfate particles, the aerosol extinction coefficients as measured by IBBCEAS were found to be in reasonable agreement with those calculated using the Mie theory. The results of the study demonstrate the potential of broadband cavity spectrometers for determining the optical properties of aerosols.

  12. Developments of aerosol retrieval algorithm for Geostationary Environmental Monitoring Spectrometer (GEMS) and the retrieval accuracy test

    NASA Astrophysics Data System (ADS)

    KIM, M.; Kim, J.; Jeong, U.; Ahn, C.; Bhartia, P. K.; Torres, O.

    2013-12-01

    A scanning UV-Visible spectrometer, the GEMS (Geostationary Environment Monitoring Spectrometer) onboard the GEO-KOMPSAT2B (Geostationary Korea Multi-Purpose Satellite) is planned to be launched in geostationary orbit in 2018. The GEMS employs hyper-spectral imaging with 0.6 nm resolution to observe solar backscatter radiation in the UV and Visible range. In the UV range, the low surface contribution to the backscattered radiation and strong interaction between aerosol absorption and molecular scattering can be advantageous in retrieving aerosol optical properties such as aerosol optical depth (AOD) and single scattering albedo (SSA). By taking the advantage, the OMI UV aerosol algorithm has provided information on the absorbing aerosol (Torres et al., 2007; Ahn et al., 2008). This study presents a UV-VIS algorithm to retrieve AOD and SSA from GEMS. The algorithm is based on the general inversion method, which uses pre-calculated look-up table with assumed aerosol properties and measurement condition. To obtain the retrieval accuracy, the error of the look-up table method occurred by the interpolation of pre-calculated radiances is estimated by using the reference dataset, and the uncertainties about aerosol type and height are evaluated. Also, the GEMS aerosol algorithm is tested with measured normalized radiance from OMI, a provisional data set for GEMS measurement, and the results are compared with the values from AERONET measurements over Asia. Additionally, the method for simultaneous retrieve of the AOD and aerosol height is discussed.

  13. Laboratory and field measurements of organic aerosols with the photoionization aerosol mass spectrometer

    NASA Astrophysics Data System (ADS)

    Dreyfus, Matthew A.

    Analytical methods developed to sample and characterize ambient organic aerosols often face the trade-off between long sampling times and the loss of detailed information regarding specific chemical species present. The soft, universal ionization scheme of the Photoionization Aerosol Mass Spectrometer (PIAMS) allows for identification of various chemical compounds by a signature ion, often the molecular ion. The goal of this thesis work is to apply PIAMS to both laboratory and field experiments to answer questions regarding the formation, composition, and behavior of organic aerosols. To achieve this goal, a variety of hardware and software upgrades were administered to PIAMS to optimize the instrument. Data collection and processing software were either refined or built from the ground up to simplify difficult or monotonous tasks. Additional components were added to PIAMS with the intent to automate the instrument, enhance the results, and make the instrument more rugged and user-friendly. These changes, combined with the application of an external particle concentration system (mini-Versatile Aerosol Concentration Enrichment System, m-VACES), allowed PIAMS to be suitable for field measurements of organic aerosols. Two such field campaigns were completed, both at the State of Delaware Air Quality Monitoring Site in Wilmington, Delaware: a one week period in June, 2006, and an 18 day period in October and November of 2007. A sampling method developed was capable of collecting sufficient ambient organic aerosol and analyzing it with a time resolution of 3.5 minutes. Because of this method, short term concentration changes of individual species can be tracked. Combined with meteorological data, the behavior of these species can be analyzed as a function of time or wind direction. Many compounds are found at enhanced levels during the evening/night-time hours; potentially due to the combined effects of temperature inversion, and fresh emissions in a cooler environment

  14. Laser velocimeter seed particle sizing by the whisker particle collector and laser aerosol spectrometer methods

    NASA Astrophysics Data System (ADS)

    Crosswy, F. L.; Kingery, M. K.; Schaefer, H. J.; Pfeifer, H. J.

    1989-07-01

    Two different aerosol particle sizing systems, the Whisker Particle Collector (WPC) and the Laser Aerosol Spectrometer (LAS), were evaluated for sizing aerosol particles in the size range of 0.1 to 3.0 micrometers. The evaluation tests were conducted using an aerosol of alumina (Al2O3) particles, an aerosol commonly used to provide light scattering particles for laser velocimeter measurements in high temperature flows. The LAS and WPC measurements were then compared for samples taken from the alumina particle aerosols. Some difficulty was encountered in directly comparing these measurements. Other operational aspects of the two systems were also compared including on-line/off-line data presentation capabilities, field portability and measurement limitations at the small particle end of the size range of interest.

  15. Characterization of organic aerosols in Beijing using an aerodyne high-resolution aerosol mass spectrometer

    NASA Astrophysics Data System (ADS)

    Zhang, Junke; Wang, Yuesi; Huang, Xiaojuan; Liu, Zirui; Ji, Dongsheng; Sun, Yang

    2015-06-01

    Fine particle of organic aerosol (OA), mostly arising from pollution, are abundant in Beijing. To achieve a better understanding of the difference in OA in summer and autumn, a high-resolution time-of-flight aerosol mass spectrometer (HR-ToF-AMS, Aerodyne Research Inc., USA) was deployed in urban Beijing in August and October 2012. The mean OA mass concentration in autumn was 30±30 μg m-3, which was higher than in summer (13±6.9 μg m-3). The elemental analysis found that OA was more aged in summer (oxygen-to-carbon (O/C) ratios were 0.41 and 0.32 for summer and autumn, respectively). Positive matrix factorization (PMF) analysis identified three and five components in summer and autumn, respectively. In summer, an oxygenated OA (OOA), a cooking-emission-related OA (COA), and a hydrocarbon-like OA (HOA) were indentified. Meanwhile, the OOA was separated into LV-OOA (low-volatility OOA) and SV-OOA (semi-volatile OOA); and in autumn, a nitrogen-containing OA (NOA) was also found. The SOA (secondary OA) was always the most important OA component, accounting for 55% of the OA in the two seasons. Back trajectory clustering analysis found that the origin of the air masses was more complex in summer. Southerly air masses in both seasons were associated with the highest OA loading, while northerly air masses were associated with the lowest OA loading. A preliminary study of OA components, especially the POA (primary OA), in different periods found that the HOA and COA all decreased during the National Day holiday period, and HOA decreased at weekends compared with weekdays.

  16. Using Raman-lidar-based regularized microphysical retrievals and Aerosol Mass Spectrometer measurements for the characterization of biomass burning aerosols

    NASA Astrophysics Data System (ADS)

    Samaras, Stefanos; Nicolae, Doina; Böckmann, Christine; Vasilescu, Jeni; Binietoglou, Ioannis; Labzovskii, Lev; Toanca, Florica; Papayannis, Alexandros

    2015-10-01

    In this work we extract the microphysical properties of aerosols for a collection of measurement cases with low volume depolarization ratio originating from fire sources captured by the Raman lidar located at the National Institute of Optoelectronics (INOE) in Bucharest. Our algorithm was tested not only for pure smoke but also for mixed smoke and urban aerosols of variable age and growth. Applying a sensitivity analysis on initial parameter settings of our retrieval code was proved vital for producing semi-automatized retrievals with a hybrid regularization method developed at the Institute of Mathematics of Potsdam University. A direct quantitative comparison of the retrieved microphysical properties with measurements from a Compact Time of Flight Aerosol Mass Spectrometer (CToF-AMS) is used to validate our algorithm. Microphysical retrievals performed with sun photometer data are also used to explore our results. Focusing on the fine mode we observed remarkable similarities between the retrieved size distribution and the one measured by the AMS. More complicated atmospheric structures and the factor of absorption appear to depend more on particle radius being subject to variation. A good correlation was found between the aerosol effective radius and particle age, using the ratio of lidar ratios (LR: aerosol extinction to backscatter ratios) as an indicator for the latter. Finally, the dependence on relative humidity of aerosol effective radii measured on the ground and within the layers aloft show similar patterns.

  17. Investigate the relationship between multiwavelength lidar ratios and aerosol size distributions using aerodynamic particle sizer spectrometer

    NASA Astrophysics Data System (ADS)

    Zhao, Hu; Hua, Dengxin; Mao, Jiandong; Zhou, Chunyan

    2017-02-01

    The real aerosol size distributions were obtained by aerodynamic particle sizer spectrometer (APS) in China YinChuan. The lidar ratios at wavelengths of 355 nm, 532 nm and 1064 nm were calculated using Mie theory. The effective radius of aerosol particles reff and volume C/F ratio (coarse/fine) Vc/f were retrieved from the real aerosol size distributions. The relationship between multiwavelength lidar ratios and particle reff and Vc/f were investigated. The results indicate that the lidar ratio is positive correlated to the particle reff and Vc/f. The lidar ratio is more sensitive to the coarse particles. The short wavelength lidar ratio is more sensitive to the particle Vc/f and the long wavelength lidar ratio is more sensitive to the particle reff. The wavelength dependency indicated that the lidar ratios decrease with increasing the wavelength. The lidar ratios are almost irrelevant to the shape and total particles of aerosol size distributions.

  18. An Airborne A-Band Spectrometer for Remote Sensing Of Aerosol and Cloud Optical Properties

    NASA Technical Reports Server (NTRS)

    Pitts, Michael; Hostetler, Chris; Poole, Lamont; Holden, Carl; Rault, Didier

    2000-01-01

    Atmospheric remote sensing with the O2 A-band has a relatively long history, but most of these studies were attempting to estimate surface pressure or cloud-top pressure. Recent conceptual studies have demonstrated the potential of spaceborne high spectral resolution O2 A-band spectrometers for retrieval of aerosol and cloud optical properties. The physical rationale of this new approach is that information on the scattering properties of the atmosphere is embedded in the detailed line structure of the O2 A-band reflected radiance spectrum. The key to extracting this information is to measure the radiance spectrum at very high spectral resolution. Instrument performance requirement studies indicate that, in addition to high spectral resolution, the successful retrieval of aerosol and cloud properties from A-band radiance spectra will also require high radiometric accuracy, instrument stability, and high signal-to-noise measurements. To experimentally assess the capabilities of this promising new remote sensing application, the NASA Langley Research Center is developing an airborne high spectral resolution A-band spectrometer. The spectrometer uses a plane holographic grating with a folded Littrow geometry to achieve high spectral resolution (0.5 cm-1) and low stray light in a compact package. This instrument will be flown in a series of field campaigns beginning in 2001 to evaluate the overall feasibility of this new technique. Results from these campaigns should be particularly valuable for future spaceborne applications of A-band spectrometers for aerosol and cloud retrievals.

  19. Vertical profiles of atmospheric fluorescent aerosols observed by a mutil-channel lidar spectrometer system

    NASA Astrophysics Data System (ADS)

    Huang, Z.; Huang, J.; Zhou, T.; Sugimoto, N.; Bi, J.

    2015-12-01

    Zhongwei Huang1*, Jianping Huang1, Tian Zhou1, Nobuo Sugimoto2, Jianrong Bi1 and Jinsen Shi11Key Laboratory for Semi-Arid Climate Change of the Ministry of Education, College of Atmospheric Sciences, Lanzhou University, Lanzhou, China. 2Atmospheric Environment Division, National Institutes for Environmental Studies, Tsukuba, Japan Email: huangzhongwei@lzu.edu.cn Abstract Atmospheric aerosols have a significant impact on regional and globe climate. The challenge in quantifying aerosol direct radiative forcing and aerosol-cloud interactions arises from large spatial and temporal heterogeneity of aerosol concentrations, compositions, sizes, shape and optical properties (IPCC, 2007). Lidar offers some remarkable advantages for determining the vertical structure of atmospheric aerosols and their related optical properties. To investigate the characterization of atmospheric aerosols (especially bioaerosols) with high spatial and temporal resolution, we developed a Raman/fluorescence/polarization lidar system employed a multi-channel spectrometer, with capabilities of providing measurements of Raman scattering and laser-induced fluorescence excitation at 355 nm from atmospheric aerosols. Meanwhile, the lidar system operated polarization measurements both at 355nm and 532nm wavelengths, aiming to obtain more information of aerosols. It employs a high power pulsed laser and a received telescope with 350mm diameter. The receiver could simultaneously detect a wide fluorescent spectrum about 178 nm with spectral resolution 5.7 nm, mainly including an F/3.7 Crossed Czerny-Turner spectrograph, a grating (1200 gr/mm) and a PMT array with 32 photocathode elements. Vertical structure of fluorescent aerosols in the atmosphere was observed by the developed lidar system at four sites across northwest China, during 2014 spring field observation that conducted by Lanzhou University. It has been proved that the developed lidar could detect the fluorescent aerosols with high temporal and

  20. Aerosol absorption measurement at SWIR with water vapor interference using a differential photoacoustic spectrometer.

    PubMed

    Zhu, Wenyue; Liu, Qiang; Wu, Yi

    2015-09-07

    Atmospheric aerosol plays an important role in atmospheric radiation balance through absorbing and scattering the solar radiation, which changes local weather and global climate. Accurate measurement is highly requested to estimate the radiative effects and climate effects of atmospheric aerosol. Photoacoustic spectroscopy (PAS) technique, which observes the aerosols on their natural suspended state and is insensitive to light scattering, is commonly recognized as one of the best candidates to measure the optical absorption coefficient (OAC) of aerosols. In the present work, a method of measuring aerosol OAC at the wavelength where could also be absorbed by water vapor was proposed and corresponding measurements of the absorption properties of the atmospheric aerosol at the short wave infrared (SWIR, 1342 nm) wavelength were carried out. The spectrometer was made up of two high performance homemade photoacoustic cells. To improve the sensitivity, several methods were presented to control the noise derived from gas flow and vibration from the sampling pump. Calibration of the OAC and properties of the system were also studied in detail. Using the established PAS instrument, measurement of the optical absorption properties of the atmospheric aerosol were carried out in laboratory and field environment.

  1. Detection of organophosphorus aerosols by a cloud condensation nuclei spectrometer of new design

    NASA Astrophysics Data System (ADS)

    Hudson, James G.; Dong, Ya Y.; Hallet, John; Carlon, Hugh R.; Allan, Craig R.

    1989-03-01

    The Cloud Condensation Nuclei (CCN) Spectrometer is a newly-developed instrument, which was devised and built by the Desert Research Institute (DRI). Unlike other CCN Spectrometers, this one uses droplet size to infer the critical supersaturation (Sc) spectrum of the sampled aerosol. The new instrument obtains simultaneous CCN spectra from the droplet spectra. Since the nuclei can be as small as 0.01 micrometer in diameter and are too small to obtain a size spectrum, they are amplified by water condensation to micrometer sizes that can be easily detected by an optical particle counter. The droplet spectrum is then related to the CCN spectrum through calibration using monodisperse salt aerosol with known Sc's. Droplet size dispersion is achieved by exposing the sample to an increasing Sc as it passes through the chamber. Preliminary studies have shown that the new system can detect and characterize organophosphorus aerosols, such as Malathian, and is useful in measuring and identifying natural or background aerosols against which chemical warfare aerosols would have to be detected. Further work is suggested to improve detection specificity and to permit a wider range of water-insoluble substances to be detected.

  2. Evaluating Simulations of Primary Anthropogenic and Biomass Burning Organic Aerosols using Aerosol Mass Spectrometer Data and Positive Matrix Factorization Analysis

    NASA Astrophysics Data System (ADS)

    Fast, J.; Aiken, A.; Alexander, L.; Canagaratna, M.; Decarlo, P.; Herndon, S.; Jimenez, J.; Kleinman, L.; Ochoa, C.; Onasch, T.; Song, C.; Wiedinmyer, C.; Yu, X.; Zaveri, R.

    2008-12-01

    Most model predictions of organic matter are currently underestimated because the processes contributing to secondary organic aerosol (SOA) formation and transformation are not well understood. Since research associated with developing a better framework to improve the representation of specific gas-to-particle partitioning processes controlling SOA based on new measurements and theoretical relationships is on- going, this study seeks to determine whether 3-D models can adequately predict concentrations of primary organic aerosols (POA). If one assumes POA is non-volatile, then errors in POA predictions will results from uncertainties in the emission inventories and errors in transport and mixing processes. The WRF-chem model is used to predict POA in the vicinity of Mexico City during the 2006 MILAGRO field campaign. Particulate matter emission rates were obtained from urban and regional Mexican emission inventories and from biomass burning estimates derived from MODIS "hotspot" and vegetation databases. Organic aerosol predictions are evaluated using data from Aerodyne Aerosol Mass Spectrometer (AMS) instruments deployed at four ground sites and on two research aircraft and from Sunset Laboratory OCEC instruments deployed at two ground sites. Positive Matrix Factorization (PMF) has recently been applied to derive components of organic aerosols including: hydrocarbon-like organic aerosol (HOA), oxidized organic aerosol (OOA), and biomass burning organic aerosols (BBOA). The temporal variation of HOA is often similar to primary emissions of other species in urban areas. PMF analysis is currently available for three of the ground sites and for some of the aircraft flights. We found that the predicted POA was consistently lower than the measured organic matter at the ground sites, which is consistent with the expectation that SOA should be a large fraction of the total organic aerosol mass. A much better agreement was found when predicted POA was compared with HOA

  3. Laboratory and Ambient Studies Using an Automated Semi-Continuous Single-Particle Aerosol Raman Spectrometer

    NASA Astrophysics Data System (ADS)

    Doughty, D., III; Hill, S. C.

    2015-12-01

    Single-particle Raman spectra can yield extensive information about in-situ ambient particulate composition. However, Raman spectral measurements of individual aerosol particles typically require collection of samples in the field followed by offline Raman spectral measurements in a laboratory. The process requires considerable operator time. We report results obtained with an automated, single-particle Aerosol Raman Spectrometer built by Battelle, which is the core of Battelle's Resource Effective Bioidentification System (REBS). This instrument collects aerosol particles onto a metallized polymer tape and simultaneously measures Raman spectra of particles obtained during the previous collection period. At the end of each collection period (typically 15 minutes), the tape is advanced and the next collection and measurement period is begun. In this way, particles are semi-continuously sampled and their Raman spectra are measured. We show laboratory data from different sizes of polystyrene latex spheres. We also show results from calcium sulfate particles, vehicular emission soot, and other particles. We discuss the influence of imaging time on the quality of the Raman spectra measured and on the ability of the instrument to resolve aerosol particles. Finally, we present results from an outdoor sampling period during the summer of 2015 where the instrument ran unattended for more than one week collecting particles and measuring their Raman spectra. We suggest that the routine use of such an automated particle-sampling instrument should increase our understanding of inorganic and organic aerosols including biological aerosols and sources and fates of these particles.

  4. Characterization and source apportionment of submicron aerosol with aerosol mass spectrometer during the PRIDE-PRD 2006 campaign

    NASA Astrophysics Data System (ADS)

    Xiao, R.; Takegawa, N.; Zheng, M.; Kondo, Y.; Miyazaki, Y.; Miyakawa, T.; Hu, M.; Shao, M.; Zeng, L.; Gong, Y.; Lu, K.; Deng, Z.; Zhao, Y.; Zhang, Y. H.

    2011-01-01

    Size-resolved chemical compositions of non-refractory submicron aerosol were measured using an Aerodyne quadrupole aerosol mass spectrometer (Q-AMS) at the rural site Back Garden (BG), located ~50 km northwest of Guangzhou in July 2006. This paper characterized the submicron aerosol particles of regional air pollution in Pearl River Delta (PRD) in the Southern China. Organics and sulfate dominated the submicron aerosol compositions, with average mass concentrations of 11.8±8.4 μg m-3 and 13.5±8.7 μg m-3, respectively. Unlike other air masses, the air masses originated from Southeast-South and passing through the PRD urban areas exhibited distinct bimodal size distribution characteristics for both organics and sulfate: the first mode peaked at vacuum aerodynamic diameters (Dva)~200 nm and the second mode occurred at Dva from 300-700 nm. With the information from AMS, it was found from this study that the first mode of organics in PRD regional air masses was contributed by both secondary organic aerosol formation and combustion-related emissions, which is different from most findings in other urban areas (first mode of organics primarily from combustion-related emissions). The analysis of AMS mass spectra data by positive matrix factorization (PMF) model identified three sources of submicron organic aerosol including hydrocarbon-like organic aerosol (HOA), low volatility oxygenated organic aerosol (LV-OOA) and semi-volatile oxygenated organic aerosol (SV-OOA). The strong correlation between HOA and EC indicated primary combustion emissions as the major source of HOA while a close correlation between SV-OOA and semi-volatile secondary species nitrate as well as between LV-OOA and nonvolatile secondary species sulfate suggested secondary aerosol formation as the major source of SV-OOA and LV-OOA at the BG site. However, LV-OOA was more aged than SV-OOA as its spectra was highly correlated with the reference spectra of fulvic acid, an indicator of aged and

  5. Characterization and source apportionment of submicron aerosol with aerosol mass spectrometer during the PRIDE-PRD 2006 campaign

    NASA Astrophysics Data System (ADS)

    Xiao, R.; Takegawa, N.; Zheng, M.; Kondo, Y.; Miyazaki, Y.; Miyakawa, T.; Hu, M.; Shao, M.; Zeng, L.; Gong, Y.; Lu, K.; Deng, Z.; Zhao, Y.; Zhang, Y. H.

    2011-07-01

    Size-resolved chemical compositions of non-refractory submicron aerosol were measured using an Aerodyne quadrupole aerosol mass spectrometer (Q-AMS) at the rural site Back Garden (BG), located ~50 km northwest of Guangzhou in July 2006. This paper characterized the submicron aerosol particles of regional air pollution in Pearl River Delta (PRD) in the southern China. Organics and sulfate dominated the submicron aerosol compositions, with average mass concentrations of 11.8 ± 8.4 μg m-3 and 13.5 ± 8.7 μg m-3, respectively. Unlike other air masses, the air masses originated from Southeast-South and passing through the PRD urban areas exhibited distinct bimodal size distribution characteristics for both organics and sulfate: the first mode peaked at vacuum aerodynamic diameters (Dva) ∼200 nm and the second mode occurred at Dva from 300-700 nm. With the information from AMS, it was found from this study that the first mode of organics in PRD regional air masses was contributed by both secondary organic aerosol formation and combustion-related emissions, which is different from most findings in other urban areas (first mode of organics primarily from combustion-related emissions). The analysis of AMS mass spectra data by positive matrix factorization (PMF) model identified three sources of submicron organic aerosol including hydrocarbon-like organic aerosol (HOA), low volatility oxygenated organic aerosol (LV-OOA) and semi-volatile oxygenated organic aerosol (SV-OOA). The strong correlation between HOA and EC indicated primary combustion emissions as the major source of HOA while a close correlation between SV-OOA and semi-volatile secondary species nitrate as well as between LV-OOA and nonvolatile secondary species sulfate suggested secondary aerosol formation as the major source of SV-OOA and LV-OOA at the BG site. However, LV-OOA was more aged than SV-OOA as its spectra was highly correlated with the reference spectra of fulvic acid, an indicator of aged and

  6. Properties of coastal Antarctic aerosol from combined FTIR spectrometer and sun photometer measurements

    NASA Astrophysics Data System (ADS)

    Rathke, Carsten; Notholt, Justus; Fischer, Jürgen; Herber, Andreas

    2002-12-01

    Remotely sensing the physical and chemical properties of summertime aerosol at the Antarctic coastal station Neumayer has been accomplished for the first time by a combined analysis of atmospheric thermal emission spectra, measured by an FTIR spectrometer, and atmospheric visible-near infrared extinction spectra, measured by a sun photometer. From the synergy of both spectral ranges, we find that the aerosol is composed of 1.1-1.6 mg m-2 of sulfates, with the water component in the solid phase, having a bimodal size distribution with radii peaking at 0.04 and 0.64 μm. We also provide the first estimate of the direct thermal radiative forcing of this aerosol: +1.68 W m-2 at the surface, and +0.006 W m-2 at the top of the atmosphere.

  7. Response of an aerosol mass spectrometer to organonitrates and organosulfates and implications for atmospheric chemistry.

    PubMed

    Farmer, D K; Matsunaga, A; Docherty, K S; Surratt, J D; Seinfeld, J H; Ziemann, P J; Jimenez, J L

    2010-04-13

    Organonitrates (ON) are important products of gas-phase oxidation of volatile organic compounds in the troposphere; some models predict, and laboratory studies show, the formation of large, multifunctional ON with vapor pressures low enough to partition to the particle phase. Organosulfates (OS) have also been recently detected in secondary organic aerosol. Despite their potential importance, ON and OS remain a nearly unexplored aspect of atmospheric chemistry because few studies have quantified particulate ON or OS in ambient air. We report the response of a high-resolution time-of-flight aerosol mass spectrometer (AMS) to aerosol ON and OS standards and mixtures. We quantify the potentially substantial underestimation of organic aerosol O/C, commonly used as a metric for aging, and N/C. Most of the ON-nitrogen appears as NO(x)+ ions in the AMS, which are typically dominated by inorganic nitrate. Minor organonitrogen ions are observed although their identity and intensity vary between standards. We evaluate the potential for using NO(x)+ fragment ratios, organonitrogen ions, HNO(3)+ ions, the ammonium balance of the nominally inorganic ions, and comparison to ion-chromatography instruments to constrain the concentrations of ON for ambient datasets, and apply these techniques to a field study in Riverside, CA. OS manifests as separate organic and sulfate components in the AMS with minimal organosulfur fragments and little difference in fragmentation from inorganic sulfate. The low thermal stability of ON and OS likely causes similar detection difficulties for other aerosol mass spectrometers using vaporization and/or ionization techniques with similar or larger energy, which has likely led to an underappreciation of these species.

  8. Fast Airborne Aerosol Size and Chemistry Measurements with the High Resolution Aerosol Mass Spectrometer during the MILAGRO Campaign

    NASA Technical Reports Server (NTRS)

    DeCarlo, P. F.; Dunlea, E. J.; Kimmel, J. R.; Aiken, A. C.; Sueper, D.; Crounse, J.; Wennberg, P. O.; Emmons, L.; Shinozuka, Y.; Clarke, A.; Zhou, J.; Tomlinson, J.; Collins,D. R.; Knapp, D.; Weinheimer, A. J.; Montzka,D. D.; Campos,T.; Jimenez, J. L.

    2007-01-01

    The concentration, size, and composition of non-refractory submicron aerosol (NR-PM(sub l)) was measured over Mexico City and central Mexico with a High-Resolution Time-of-Flight Aerosol Mass Spectrometer (HR-ToF-AMS) onboard the NSF/NCAR C-130 aircraft as part of the MILAGRO field campaign. This was the first aircraft deployment of the HR-ToF-AMS. During the campaign the instrument performed very well, and provided 12 s data. The aerosol mass from the AMS correlates strongly with other aerosol measurements on board the aircraft. Organic aerosol (OA) species dominate the NR-PM(sub l) mass. OA correlates strongly with CO and HCN indicating that pollution (mostly secondary OA, SOA) and biomass burning (BB) are the main OA sources. The OA to CO ratio indicates a typical value for aged air of around 80 microg/cubic m (STP) ppm(exp -1). This is within the range observed in outflow from the Northeastern US, which could be due to a compensating effect between higher BB but lower biogenic VOC emissions during this study. The O/C atomic ratio for OA is calculated from the HR mass spectra and shows a clear increase with photochemical age, as SOA forms rapidly and quickly overwhelms primary urban OA, consistent with Volkamer et al. (2006) and Kleinman et al. (2008). The stability of the OA/CO while O/C increases with photochemical age implies a net loss of carbon from the OA. BB OA is marked by signals at m/z 60 and 73, and also by a signal enhancement at large m/z indicative of larger molecules or more resistance to fragmentation. The main inorganic components show different spatial patterns and size distributions. Sulfate is regional in nature with clear volcanic and petrochemical/power plant sources, while the urban area is not a major regional source for this species. Nitrate is enhanced significantly in the urban area and immediate outflow, and is strongly correlated with CO indicating a strong urban source. The importance of nitrate decreases with distance from the city

  9. Development and characterization of an aircraft aerosol time-of-flight mass spectrometer.

    PubMed

    Pratt, Kerri A; Mayer, Joseph E; Holecek, John C; Moffet, Ryan C; Sanchez, Rene O; Rebotier, Thomas P; Furutani, Hiroshi; Gonin, Marc; Fuhrer, Katrin; Su, Yongxuan; Guazzotti, Sergio; Prather, Kimberly A

    2009-03-01

    Vertical and horizontal profiles of atmospheric aerosols are necessary for understanding the impact of air pollution on regional and global climate. To gain further insight into the size-resolved chemistry of individual atmospheric particles, a smaller aerosol time-of-flight mass spectrometer (ATOFMS) with increased data acquisition capabilities was developed for aircraft-based studies. Compared to previous ATOFMS systems, the new instrument has a faster data acquisition rate with improved ion transmission and mass resolution, as well as reduced physical size and power consumption, all required advances for use in aircraft studies. In addition, real-time source apportionment software allows the immediate identification and classification of individual particles to guide sampling decisions while in the field. The aircraft (A)-ATOFMS was field-tested on the ground during the Study of Organic Aerosols in Riverside, CA (SOAR) and aboard an aircraft during the Ice in Clouds Experiment-Layer Clouds (ICE-L). Initial results from ICE-L represent the first reported aircraft-based single-particle dual-polarity mass spectrometry measurements and provide an increased understanding of particle mixing state as a function of altitude. Improved ion transmission allows for the first single-particle detection of species out to approximately m/z 2000, an important mass range for the detection of biological aerosols and oligomeric species. In addition, high time resolution measurements of single-particle mixing state are demonstrated and shown to be important for airborne studies where particle concentrations and chemistry vary rapidly.

  10. Detection of cw-related species in complex aerosol particles deposited on surfaces with an ion trap-based aerosol mass spectrometer

    SciTech Connect

    Harris, William A; Reilly, Pete; Whitten, William B

    2007-01-01

    A new type of aerosol mass spectrometer was developed by minimal modification of an existing commercial ion trap to analyze the semivolatile components of aerosols in real time. An aerodynamic lens-based inlet system created a well-collimated particle beam that impacted into the heated ionization volume of the commercial ion trap mass spectrometer. The semivolatile components of the aerosols were thermally vaporized and ionized by electron impact or chemical ionization in the source. The nascent ions were extracted and injected into the ion trap for mass analysis. The utility of this instrument was demonstrated by identifying semivolatile analytes in complex aerosols. This study is part of an ongoing effort to develop methods for identifying chemical species related to CW agent exposure. Our efforts focused on detection of CW-related species doped on omnipresent aerosols such as house dust particles vacuumed from various surfaces found in any office building. The doped aerosols were sampled directly into the inlet of our mass spectrometer from the vacuumed particle stream. The semivolatile analytes were deposited on house dust and identified by positive ion chemical ionization mass spectrometry up to 2.5 h after deposition. Our results suggest that the observed semivolatile species may have been chemisorbed on some of the particle surfaces in submonolayer concentrations and may remain hours after deposition. This research suggests that identification of trace CW agent-related species should be feasible by this technique.

  11. Development of Soft Ionization for Particulate Organic Detection with the Aerodyne Aerosol Mass Spectrometer

    SciTech Connect

    Trimborn, A; Williams, L R; Jayne, J T; Worsnop, D R

    2008-06-19

    During this DOE SBIR Phase II project, we have successfully developed several soft ionization techniques, i.e., ionization schemes which involve less fragmentation of the ions, for use with the Aerodyne time-of-flight aerosol mass spectrometer (ToF-AMS). Vacuum ultraviolet single photon ionization was demonstrated in the laboratory and deployed in field campaigns. Vacuum ultraviolet single photon ionization allows better identification of organic species in aerosol particles as shown in laboratory experiments on single component particles, and in field measurements on complex multi-component particles. Dissociative electron attachment with lower energy electrons (less than 30 eV) was demonstrated in the measurement of particulate organics in chamber experiments in Switzerland, and is now a routine approach with AMS systems configured for bipolar, negative ion detection. This technique is particularly powerful for detection of acidic and other highly oxygenated secondary organic aerosol (SOA) chemical functionality. Low energy electron ionization (10 to 12 eV) is also a softer ionization approach routinely available to AMS users. Finally, Lithium ion attachment has been shown to be sensitive to more alkyl-like chemical functionality in SOA. Results from Mexico City are particularly exciting in observing changes in SOA molecular composition under different photochemical/meteorological conditions. More recent results detecting biomass burns at the Montana fire lab have demonstrated quantitative and selective detection of levoglucosan. These soft ionization techniques provide the ToF-AMS with better capability for identifying organic species in ambient atmospheric aerosol particles. This, in turn, will allow more detailed study of the sources, transformations and fate of organic-containing aerosol.

  12. A novel single-cavity three-wavelength photoacoustic spectrometer for atmospheric aerosol research

    NASA Astrophysics Data System (ADS)

    Linke, Claudia; Ibrahim, Inas; Schleicher, Nina; Hitzenberger, Regina; Andreae, Meinrat O.; Leisner, Thomas; Schnaiter, Martin

    2016-11-01

    The spectral light-absorbing behavior of carbonaceous aerosols varies depending on the chemical composition and structure of the particles. A new single-cavity three-wavelength photoacoustic spectrometer was developed and characterized for measuring absorption coefficients at three wavelengths across the visible spectral range. In laboratory studies, several types of soot with different organic content were generated by a diffusion flame burner and were investigated for changes in mass-specific absorption cross section (MAC) values, absorption and scattering Ångström exponents (αabs and αsca), and single scattering albedo (ω). By increasing the organic carbonaceous (OC) content of the aerosol from 50 to 90 % of the total carbonaceous mass, for 660 nm nearly no change of MAC was found with increasing OC content. In contrast, for 532 nm a significant increase, and for 445 nm a strong increase of MAC was found with increasing OC content of the aerosol. Depending on the OC content, the Ångström exponents of absorption and scattering as well as the single scattering albedo increased. These laboratory results were compared to a field study at a traffic-dominated urban site, which was also influenced by residential wood combustion. For this site a daily average value of αabs(445-660) of 1.9 was found.

  13. Effect of Vaporizer Temperature on Ambient Non-Refractory Submicron Aerosol Composition and Mass Spectra Measured by the Aerosol Mass Spectrometer

    EPA Science Inventory

    Aerodyne Aerosol Mass Spectrometers (AMS) are routinely operated with a constant vaporizer temperature (Tvap) of 600oC in order to facilitate quantitative detection of non-refractory submicron (NR-PM1) species. By analogy with other thermal desorption instrument...

  14. A smog chamber study coupling a photoionization aerosol electron/ion spectrometer to VUV synchrotron radiation: organic and inorganic-organic mixed aerosol analysis

    NASA Astrophysics Data System (ADS)

    Baeza-Romero, María Teresa; Gaie-Levrel, Francois; Mahjoub, Ahmed; López-Arza, Vicente; Garcia, Gustavo A.; Nahon, Laurent

    2016-07-01

    A reaction chamber was coupled to a photoionization aerosol time-of-flight mass spectrometer based on an electron/ion coincidence scheme and applied for on-line analysis of organic and inorganic-organic mixed aerosols using synchrotron tunable vacuum ultraviolet (VUV) photons as the ionization source. In this proof of principle study, both aerosol and gas phase were detected simultaneously but could be differentiated. Present results and perspectives for improvement for this set-up are shown in the study of ozonolysis ([O3] = 0.13-3 ppm) of α-pinene (2-3 ppm), and the uptake of glyoxal upon ammonium sulphate. In this work the ozone concentration was monitored in real time, together with the particle size distributions and chemical composition, the latter taking advantage of the coincidence spectrometer and the tuneability of the synchrotron radiation as a soft VUV ionization source.

  15. Expected trace gas and aerosol retrieval accuracy of the Geostationary Environment Monitoring Spectrometer

    NASA Astrophysics Data System (ADS)

    Jeong, U.; Kim, J.; Liu, X.; Lee, K. H.; Chance, K.; Song, C. H.

    2015-12-01

    The predicted accuracy of the trace gases and aerosol retrievals from the geostationary environment monitoring spectrometer (GEMS) was investigated. The GEMS is one of the first sensors to monitor NO2, SO2, HCHO, O3, and aerosols onboard geostationary earth orbit (GEO) over Asia. Since the GEMS is not launched yet, the simulated measurements and its precision were used in this study. The random and systematic component of the measurement error was estimated based on the instrument design. The atmospheric profiles were obtained from Model for Ozone And Related chemical Tracers (MOZART) simulations and surface reflectances were obtained from climatology of OMI Lambertian equivalent reflectance. The uncertainties of the GEMS trace gas and aerosol products were estimated based on the OE method using the atmospheric profile and surface reflectance. Most of the estimated uncertainties of NO2, HCHO, stratospheric and total O3 products satisfied the user's requirements with sufficient margin. However, about 26% of the estimated uncertainties of SO2 and about 30% of the estimated uncertainties of tropospheric O3 do not meet the required precision. Particularly the estimated uncertainty of SO2 is high in winter, when the emission is strong in East Asia. Further efforts are necessary in order to improve the retrieval accuracy of SO2 and tropospheric O3 in order to reach the scientific goal of GEMS. Random measurement error of GEMS was important for the NO2, SO2, and HCHO retrieval, while both the random and systematic measurement errors were important for the O3 retrievals. The degree of freedom for signal of tropospheric O3 was 0.8 ± 0.2 and that for stratospheric O3 was 2.9 ± 0.5. The estimated uncertainties of the aerosol retrieval from GEMS measurements were predicted to be lower than the required precision for the SZA range of the trace gas retrievals.

  16. Demonstration of a VUV lamp photoionization source for improvedorganic speciation in an aerosol mass spectrometer

    SciTech Connect

    Northway, M.J.; Jayne, J.T.; Toohey, D.W.; Canagaratna, M.R.; Trimborn, A.; Akiyama, K-I.; Shimono, A.; Jimenez, J.L.; DeCarlo, P.F.; Wilson, K.R.; Worsnop, D.R.

    2007-10-03

    In recent years, the Aerodyne AerosolMass Spectrometer(AMS) has become a widely used tool for determining aerosol sizedistributions and chemical composition for non-refractory inorganic andorganic aerosol. The current version of the AMS uses a combination offlash thermal vaporization and 70 eV electron impact (EI) ionization.However, EI causes extensive fragmentation and mass spectra of organicaerosols are difficult to deconvolute because they are composites of theoverlapping fragmentation patterns of all species present. Previous AMSstudies have been limited to classifying organics in broad categoriessuch as oxidized and hydrocarbon-like." In this manuscript we present newefforts to gain more information about organic aerosol composition byemploying the softer technique of vacuum ultraviolet (VUV) ionization ina Time-of-Flight AMS (ToF-AMS). In our novel design a VUV lamp is placedin direct proximity of the ionization region of the AMS, with only awindow separating the lamp and the ionizer. This design allows foralternation of photoionization and electron impact ionization within thesame instrument on the timescale of minutes. Thus, the EI-basedquantification capability of the AMS is retained while improved spectralinterpretation is made possible by combined analysis of the complementaryVUV and EI ionization spectra. Photoionization and electron impactionization spectra are compared for a number of compounds including oleicacid, long chain hydrocarbons, and cigarette smoke. In general, the VUVspectra contain much less fragmentation than the EI spectra and for manycompounds the parent ion is the dominant ion in the VUV spectrum. As anexample of the usefulness of the integration of PI within the fullcapability of the ToF-AMS, size distributions and size-segregated massspectra are examined for the cigarette smoke analysis. As a finalevaluation of the new VUV module, spectra for oleic acid are compared tosimilar experiments conducted using the tunable VUV radiation

  17. A concept of an automated function control for ambient aerosol measurements using mobility particle size spectrometers

    NASA Astrophysics Data System (ADS)

    Bastian, S.; Löschau, G.; Wiedensohler, A.

    2014-04-01

    An automated function control unit was developed to regularly check the ambient particle number concentration derived from a mobility particle size spectrometer as well as its zero-point behaviour. The function control allows unattended quality assurance experiments at remote air quality monitoring or research stations under field conditions. The automated function control also has the advantage of being able to get a faster system stability response than the recommended on-site comparisons with reference instruments. The method is based on a comparison of the total particle number concentration measured by a mobility particle size spectrometer and a condensation particle counter while removing diffusive particles smaller than 20 nm in diameter. In practice, the small particles are removed by a set of diffusion screens, as traditionally used in a diffusion battery. Another feature of the automated function control is to check the zero-point behaviour of the ambient aerosol passing through a high-efficiency particulate air (HEPA) filter. The performance of the function control is illustrated with the aid of a 1-year data set recorded at Annaberg-Buchholz, a station in the Saxon air quality monitoring network. During the period of concern, the total particle number concentration derived from the mobility particle size spectrometer slightly overestimated the particle number concentration recorded by the condensation particle counter by 2 % (grand average). Based on our first year of experience with the function control, we developed tolerance criteria that allow a performance evaluation of a tested mobility particle size spectrometer with respect to the total particle number concentration. We conclude that the automated function control enhances the quality and reliability of unattended long-term particle number size distribution measurements. This will have beneficial effects for intercomparison studies involving different measurement sites, and help provide a higher

  18. Thermal Emission Spectrometer Results: Mars Atmospheric Thermal Structure and Aerosol Distribution

    NASA Technical Reports Server (NTRS)

    Smith, Michael D.; Pearl, John C.; Conrath, Barney J.; Christensen, Philip R.; Vondrak, Richard R. (Technical Monitor)

    2001-01-01

    Infrared spectra returned by the Thermal Emission Spectrometer (TES) are well suited for retrieval of the thermal structure and the distribution of aerosols in the Martian atmosphere. Combined nadir- and limb-viewing spectra allow global monitoring of the atmosphere up to 0.01 mbar (65 km). We report here on the atmospheric thermal structure and the distribution of aerosols as observed thus far during the mapping phase of the Mars Global Surveyor mission. Zonal and temporal mean cross sections are used to examine the seasonal evolution of atmospheric temperatures and zonal winds during a period extending from northern hemisphere mid-summer through vernal equinox (L(sub s) = 104-360 deg). Temperature maps at selected pressure levels provide a characterization of planetary-scale waves. Retrieved atmospheric infrared dust opacity maps show the formation and evolution of regional dust storms during southern hemisphere summer. Response of the atmospheric thermal structure to the changing dust loading is observed. Maps of water-ice clouds as viewed in the thermal infrared are presented along with seasonal trends of infrared water-ice opacity. Uses of these observations for diagnostic studies of the dynamics of the atmosphere are discussed.

  19. Laboratory Testing and Calibration of the Nuclei-Mode Aerosol Size Spectrometer

    NASA Technical Reports Server (NTRS)

    Brock, Charles A.

    1999-01-01

    This grant was awarded to complete testing and calibration of a new instrument, the nuclei-mode aerosol size spectrometer (N-MASS), following its use in the WB-57F Aerosol Measurement (WAM) campaign in early 1998. The N-MASS measures the size distribution of particles in the 4-60 nm diameter range with 1-Hz response at typical free tropospheric conditions. Specific tasks to have been completed under the auspices of this award were: 1) to experimentally determine the instrumental sampling efficiency; 2) to determine the effects of varying temperatures and flows on N-MASS performance; and 3) to calibrate the N-MASS at typical flight conditions as operated in WAM. The work outlined above has been completed, and a journal manuscript based on this work and that describes the performance of the N-MASS is in preparation. Following a brief description of the principles of operation of the instrument, the major findings of this study are described.

  20. Formation and Processing of Organic Aerosols Measured by a Time of Flight Aerosol Mass Spectrometer during TexAQS/GoMACCS 2006

    NASA Astrophysics Data System (ADS)

    Bahreini, R.; Middlebrook, A. M.; Decarlo, P. F.; Denlea, E.; Jimenez, J. L.; Brock, C. A.; Degouw, J. A.; Flocke, F.; Gallar, C.; Holloway, J. S.; Neuman, J. A.; Ryerson, T. B.; Schwarz, J. P.; Spackman, J. R.; Trainer, M. K.; Warneke, C.; Wollny, A. G.; Zhang, W.; Fehsenfeld, F. C.

    2007-12-01

    Formation of particulate matter is common in areas with high emissions of volatile organic compounds (VOCs), NOx, and SO2. These particles have lifetimes of days to weeks, and thus can have both local and regional effects on visibility, air quality, and human health as well as direct and indirect effects on climate. During TexAQS 2006, mass concentrations of non-refractory inorganic species (sulfate, ammonium, and nitrate) and total organics in submicron aerosols were measured by a Compact Time of Flight Aerosol Mass Spectrometer (C-ToF-AMS) onboard the NOAA WP-3D aircraft. In this presentation, we analyze composition changes of organic aerosols in different air masses. We examine organic mass spectra along with simultaneous measurements of VOCs and their oxidation products in order to determine the contribution of anthropogenic and biogenic sources to the aerosol organic mass. These measurements were performed in plumes intercepted during the daytime north of Houston where large isoprene emissions were observed. Furthermore, the fresh hydrocarbon-like (HOA) and processed oxygenated-like organics (OOA) fractions of the total organic aerosol mass in several plumes transected during daytime and nighttime are presented and compared. We will also discuss differences in correlations between organic aerosol composition markers and primary or secondary gas-phase species in different plumes.

  1. Fullerene Soot in Eastern China Air: Results from Soot Particle-Aerosol Mass Spectrometer

    NASA Astrophysics Data System (ADS)

    Wang, J.; Ge, X.; Chen, M.; Zhang, Q.; Yu, H.; Sun, Y.; Worsnop, D. R.; Collier, S.

    2015-12-01

    In this work, we present for the first time, the observation and quantification of fullerenes in ambient airborne particulate using an Aerodyne Soot Particle - Aerosol Mass Spectrometer (SP-AMS) deployed during 2015 winter in suburban Nanjing, a megacity in eastern China. The laser desorption and electron impact ionization techniques employed by the SP-AMS allow us to differentiate various fullerenes from other aerosol components. Mass spectrum of the identified fullerene soot is consisted by a series of high molecular weight carbon clusters (up to m/z of 2000 in this study), almost identical to the spectral features of commercially available fullerene soot, both with C70 and C60 clusters as the first and second most abundant species. This type of soot was observed throughout the entire study period, with an average mass loading of 0.18 μg/m3, accounting for 6.4% of the black carbon mass, 1.2% of the total organic mass. Temporal variation and diurnal pattern of fullerene soot are overall similar to those of black carbon, but are clearly different in some periods. Combining the positive matrix factorization, back-trajectory and analyses of the meteorological parameters, we identified the petrochemical industrial plants situating upwind from the sampling site, as the major source of fullerene soot. In this regard, our findings imply the ubiquitous presence of fullerene soot in ambient air of industry-influenced area, especially the oil and gas production regions. This study also offers new insights into the characterization of fullerenes from other environmental samples via the advanced SP-AMS technique.

  2. Gas-phase CO2 subtraction for improved measurements of the organic aerosol mass concentration and oxidation degree by an aerosol mass spectrometer.

    PubMed

    Collier, S; Zhang, Q

    2013-12-17

    The Aerodyne aerosol mass spectrometer (AMS) has been widely used for real-time characterization of the size-resolved chemical composition of sub-micrometer aerosol particles. The first step in AMS sampling is the pre-concentration of aerosols while stripping away the gas-phase components, which contributes to the high sensitivity of this instrument. The strength of the instrument lies in particle phase measurement; however, ion signals generated from gas-phase species can influence the interpretation of the particle-phase chemistry data. Here, we present methods for subtracting the varying contributions of gas-phase carbon dioxide (CO2) in the AMS spectra of aerosol particles, which is critical for determining the mass concentration and oxygen-to-carbon (O/C) ratio of organic aerosol. This report gives details on the gaseous CO2 subtraction analysis performed on a high-resolution time-of-flight aerosol mass spectrometer (HR-ToF-AMS) data set acquired from sampling of fresh and diluted vehicle emissions. Three different methods were used: (1) collocated continuous gas-phase CO2 measurement coupled with periodic filter tests consisting of sampling the same particle-free air by the AMS and the CO2 analyzer, (2) positive matrix factorization (PMF) analysis to separate the gas- and particle-phase signals of CO2(+) at m/z 44, and (3) use of the particle time-of-flight (PTOF) size-resolved chemical information for separation of gas- and particle-phase signals at m/z 44. Our results indicate that these three different approaches yield internally consistent values for the gas/particle apportionment of m/z 44, but methods 2 and 3 require certain conditions to be met to yield reliable results. The methods presented are applicable to any situation where gas-phase components may influence the PM signal of interest.

  3. Aerosol Particle Size Retrievals from the Compact Reconnaissance Imaging Spectrometer for Mars

    NASA Astrophysics Data System (ADS)

    Guzewich, S.; Smith, M. D.; Wolff, M. J.

    2013-12-01

    During the extended mission of the Mars Reconnaisance Orbiter, the Compact Reconnaissance Imaging Spectrometer for Mars (CRISM) has made periodic limb-viewing geometry observations of the Martian atmosphere. Sufficient radiance is typically available to produce a vertical distribution of dust and water ice aerosols from the surface to approximately 50 km altitude. Radiative transfer modeling is conducted to achieve a best fit between the observed and modeled spectrum. The spherical geometry of the limb-viewing geometry is handled using a pseudo-spherical approximation that is computationally efficient and accurate to within a few percent of a Monte Carlo method for the geometries observed. Different particle sizes of dust and water ice have unique extinction coefficients across the visible and near-infrared portion of the spectrum observed by CRISM. We use a wide range of wavelengths across the CRISM spectrum to conduct the retrieval. Here we provide initial results on the retrieval of dust and water ice particle sizes over the duration of the CRISM limb-viewing observations.

  4. A study on the temporal and spatial variability of absorbing aerosols using Total Ozone Mapping Spectrometer and Ozone Monitoring Instrument Aerosol Index data

    NASA Astrophysics Data System (ADS)

    Li, Jing; Carlson, Barbara E.; Lacis, Andrew A.

    2009-05-01

    Absorbing aerosols, especially mineral dust and black carbon, play key roles in climate change by absorbing solar radiation, heating the atmosphere, and contributing to global warming. In this paper, we first examine the consistency of the Aerosol Index (AI) product as measured by the Total Ozone Mapping Spectrometer (TOMS) and Ozone Monitoring Instrument (OMI) instruments and then analyze these AI data sets to investigate the temporal and spatial variability of UV absorbing aerosols. In contrast to the trend in aerosol optical depth found in the advanced very high-resolution radiometer data, no obvious long-term trend in absorbing aerosols is observed from the time series of AI records. The comparison between the mean annual cycle in the two data sets shows that the cycles agree very well both globally and regionally, indicating a consistency between the AI products from TOMS and OMI. Varimax rotated Empirical Orthogonal Function (EOF) analysis of detrended, deseasonalized AI data proves to be successful in isolating major dust and biomass burning source regions, as well as dust transport. Finally, we find that large, individual events, such as the Kuwait oil fire and Australian smoke plum, are isolated in individual higher-order principal components.

  5. The real part of the refractive indices and effective densities for chemically segregated ambient aerosols in Guangzhou by a single particle aerosol mass spectrometer

    NASA Astrophysics Data System (ADS)

    Zhang, G.; Bi, X.; Qiu, N.; Han, B.; Lin, Q.; Peng, L.; Chen, D.; Wang, X.; Peng, P.; Sheng, G.; Zhou, Z.

    2015-12-01

    Microphysical properties of atmospheric aerosols are essential to better evaluate their radiative forcing. This paper first presents an estimate of the real part of the refractive indices (n) and effective densities (ρeff) of chemically segregated atmospheric aerosols in China. Vacuum aerodynamic diameter, chemical compositions, and light scattering intensities of individual particles were simultaneously measured by a single particle aerosol mass spectrometer (SPAMS) during fall of 2012 in Guangzhou. On the basis of Mie theory, n and ρeff were estimated for 17 particle types in four categories: organics (OC), elemental carbon (EC), internally mixed EC and OC (ECOC), and metal rich, respectively. Results indicate the presence of spherical or nearly spherical shape for majority of particle types, whose partial scattering cross section vs. sizes were well fitted to Mie theoretical modeling results. While sharing n in a narrow range (1.47-1.53), majority of particle types exhibited a wide range of ρeff (0.87-1.51 g cm-3). OC group is associated with the lowest ρeff (0.87-1.07 g cm-3), while metal rich group with the highest ones (1.29-1.51 g cm-3). It is noteworthy that a specific EC type exhibits a complex scattering curve vs. size due to the presence of both compact and irregularly shape particles. Overall, the results on detailed relationship between physical and chemical properties benefits future researches on the impact of aerosols on visibility and climate.

  6. A broadband cavity-enhanced spectrometer for measuring the extinction of aerosols at blue and near-UV wavelengths

    NASA Astrophysics Data System (ADS)

    Venables, Dean; Fullam, Donovan; Hoa Le, Phuoc; Chen, Jun; Böge, Olaf; Herrmann, Hartmut

    2016-04-01

    We describe a new broadband cavity-enhanced absorption spectrometer for sensitive extinction measurements of aerosols. The instrument is distinguished by its broad and continuous spectral coverage from the near-UV to blue wavelengths (ca. 320 to 450 nm). The short wavelength region has been little explored compared to visible wavelengths, but is important because (1) brown carbon (BrC) absorbs strongly in this wavelength region, and (2) absorption of near-UV radiation in the atmosphere alters the photolysis rate of the key atmospheric species O3, NO2, and HONO, with implications for air quality and atmospheric oxidation capacity. The instrument performance and the effect of a switchable in-line filter are characterised. Early results using the instrument in the TROPOS atmospheric simulation chamber are presented. These experiments include studies of secondary organic aerosol formation (SOA), and biomass burning experiments of rice and wheat straw, followed by experiments simulating particle aging under daytime and nighttime conditions.

  7. ARM - Midlatitude Continental Convective Clouds - Ultra High Sensitivity Aerosol Spectrometer(tomlinson-uhsas)

    DOE Data Explorer

    Tomlinson, Jason; Jensen, Mike

    2012-02-28

    Ultra High Sensitivity Aerosol Spectrometer (UHSASA) A major component of the Mid-latitude Continental Convective Clouds Experiment (MC3E) field campaign was the deployment of an enhanced radiosonde array designed to capture the vertical profile of atmospheric state variables (pressure, temperature, humidity wind speed and wind direction) for the purpose of deriving the large-scale forcing for use in modeling studies. The radiosonde array included six sites (enhanced Central Facility [CF-1] plus five new sites) launching radiosondes at 3-6 hour sampling intervals. The network will cover an area of approximately (300)2 km2 with five outer sounding launch sites and one central launch location. The five outer sounding launch sites are: S01 Pratt, KS [ 37.7oN, 98.75oW]; S02 Chanute, KS [37.674, 95.488]; S03 Vici, Oklahoma [36.071, -99.204]; S04 Morris, Oklahoma [35.687, -95.856]; and S05 Purcell, Oklahoma [34.985, -97.522]. Soundings from the SGP Central Facility during MC3E can be retrieved from the regular ARM archive. During routine MC3E operations 4 radiosondes were launched from each of these sites (approx. 0130, 0730, 1330 and 1930 UTC). On days that were forecast to be convective up to four additional launches were launched at each site (approx. 0430, 1030, 1630, 2230 UTC). There were a total of approximately 14 of these high frequency launch days over the course of the experiment. These files contain brightness temperatures observed at Purcell during MC3E. The measurements were made with a 5 channel (22.235, 23.035, 23.835, 26.235, 30.000GHz) microwave radiometer at one minute intervals. The results have been separated into daily files and the day of observations is indicated in the file name. All observations were zenith pointing. Included in the files are the time variables base_time and time_offset. These follow the ARM time conventions. Base_time is the number seconds since January 1, 1970 at 00:00:00 for the first data point of the file and time_offset is

  8. The real part of the refractive indices and effective densities for chemically segregated ambient aerosols in Guangzhou measured by a single-particle aerosol mass spectrometer

    NASA Astrophysics Data System (ADS)

    Zhang, Guohua; Bi, Xinhui; Qiu, Ning; Han, Bingxue; Lin, Qinhao; Peng, Long; Chen, Duohong; Wang, Xinming; Peng, Ping'an; Sheng, Guoying; Zhou, Zhen

    2016-03-01

    Knowledge on the microphysical properties of atmospheric aerosols is essential to better evaluate their radiative forcing. This paper presents an estimate of the real part of the refractive indices (n) and effective densities (ρeff) of chemically segregated atmospheric aerosols in Guangzhou, China. Vacuum aerodynamic diameter, chemical compositions, and light-scattering intensities of individual particles were simultaneously measured by a single-particle aerosol mass spectrometer (SPAMS) during the fall of 2012. On the basis of Mie theory, n at a wavelength of 532 nm and ρeff were estimated for 17 particle types in four categories: organics (OC), elemental carbon (EC), internally mixed EC and OC (ECOC), and Metal-rich. The results indicate the presence of spherical or nearly spherical shapes for the majority of particle types, whose partial scattering cross-section versus sizes were well fitted to Mie theoretical modeling results. While sharing n in a narrow range (1.47-1.53), majority of particle types exhibited a wide range of ρeff (0.87-1.51 g cm-3). The OC group is associated with the lowest ρeff (0.87-1.07 g cm-3), and the Metal-rich group with the highest ones (1.29-1.51 g cm-3). It is noteworthy that a specific EC type exhibits a complex scattering curve versus size due to the presence of both compact and irregularly shaped particles. Overall, the results on the detailed relationship between physical and chemical properties benefits future research on the impact of aerosols on visibility and climate.

  9. Characterizing particulate matter emissions from vehicles: chassis-dynamometer tests using a High-Resolution Aerosol Mass Spectrometer

    NASA Astrophysics Data System (ADS)

    Collier, S.; Zhang, Q.; Forestieri, S.; Kleeman, M.; Cappa, C. D.; Kuwayama, T.

    2012-12-01

    During September of 2011 a suite of real-time instruments was used to sample vehicle emissions at the California Air Resources Board Haagen-Schmidt facility in El Monte, CA. A representative fleet of 8 spark ignition gasoline vehicles, a diesel passenger vehicle, a gasoline direct-injection vehicle and an ultra-low emissions vehicle were tested on a chassis dynamometer. The emissions were sampled into the facility's standard CVS tunnel and diluted to atmospherically relevant levels (5-30 μg/m3) while controlling other factors such as relative humidity or background black carbon particulate loading concentrations. An Aerodyne High Resolution Time-of-Flight Aerosol Mass Spectrometer (HR-ToF-MS) was among the real-time instruments used and sampled vehicle emissions at 10 second time resolution in order to characterize the non-refractory organic and inorganic particulate matter (PM). PM composition and concentration were tracked throughout the cold start driving cycle which included periods of fast acceleration and high velocity cruise control, meant to recreate typical commuter driving behavior. Variations in inorganic and organic PM composition for a given vehicle throughout the driving cycle as well as for various vehicles with differing emissions loading were characterized. Differences in PM composition for a given vehicle whose emissions are being exposed to differing experimental conditions such as varying relative humidity will also be reported. In conjunction with measurements from a Multi Wavelength Photoacoustic Black Carbon Spectrometer (MWPA-BC) and real-time gas measurements from the CARB facility, we determine the real-time emission ratios of primary organic aerosols (POA) with respect to BC and common combustion gas phase pollutants and compared to different vehicle driving conditions. The results of these tests offer the vehicle emissions community a first time glimpse at the real-time behavior of vehicle PM emissions for a variety of conditions and

  10. Aerosol mass spectrometer for the in situ analysis of chemical vapor synthesis processes in hot wall reactors

    NASA Astrophysics Data System (ADS)

    Lee, In-Kyum; Winterer, Markus

    2005-09-01

    We present a modified aerosol mass spectrometer (AMS) for the in situ analysis of chemical vapor synthesis processes in hot wall reactors and describe the transfer function of the velocity and kinetic-energy measurement. The AMS is a combination of a quadrupole mass spectrometer (QMS) and a particle mass spectrometer (PMS) and enables the in situ analysis of aerosols with high number concentrations up to 1018m-3. Size distributions of ultrafine particles in the range of 104-107u (amu) can be measured in the PMS. Simultaneously, molecular species up to 300u can be detected in the QMS. In the setup described here a furnace was developed to enable measurement directly at the reactor exit. The formation of silicon carbide (SiC) nanoparticles by thermal decomposition of tetramethylsilane (TMS) was investigated. TMS started to decompose at about 900K and carbosilanes with two [-Si-C-] units were identified as growth species in the synthesis of SiC from TMS. With increasing temperatures particles were formed and grew by coagulation. At higher temperatures sintering of the particles became an important process. Although the particle mass reduced slightly due to a smaller residence time at higher temperatures in the reactor, the particle velocity in the molecular beam of the AMS decreased significantly. A simple model is used to compare the particle velocity in a molecular beam as a function of particle mass. The significant difference in the particle velocity can be explained by a change in the particle shape factor (κp) due to sintering.

  11. Dust transport over the eastern Mediterranean derived from Total Ozone Mapping Spectrometer, Aerosol Robotic Network, and surface measurements

    NASA Astrophysics Data System (ADS)

    Kalivitis, N.; Gerasopoulos, E.; Vrekoussis, M.; Kouvarakis, G.; Kubilay, N.; Hatzianastassiou, N.; Vardavas, I.; Mihalopoulos, N.

    2007-02-01

    Multiyear surface PM10 measurements performed on Crete Island, Greece, have been used in conjunction with satellite (Total Ozone Mapping Spectrometer (TOMS)) and ground-based remote sensing measurements (Aerosol Robotic Network (AERONET)) to enhance our understanding of the evolution of mineral dust events over the eastern Mediterranean. An analysis of southerly air masses at altitudes of 1000 and 3000 m over a 5 year period (2000-2005), showed that dust can potentially arrive over Crete, either simultaneously in the lower free troposphere and inside the boundary layer (vertical extended transport (VET)) or initially into the free troposphere with the heavier particles gradually being scavenged inside the boundary layer (free troposphere transport (FTT)). Both pathways present significant seasonal variations but on an annual basis contribute almost equally to the dust transport in the area. During VET the aerosol index (AI) derived from TOMS was significantly correlated with surface PM10, and in general AI was found to be adequate for the characterization of dust loadings over the eastern Mediterranean on a climatological basis. A significant covariance between PM10 and AOT was observed during VET as well, indicating that AOT levels from AERONET may be estimated by PM10 levels at the surface. Surface measurements are thus crucial for the validation of remote sensing measurements and hence are a powerful tool for the investigation of the impact of aerosols on climate.

  12. Initial investigation of the wavelength dependence of optical properties measured with a new multi-pass Aerosol Extinction Differential Optical Absorption Spectrometer (AE-DOAS)

    NASA Astrophysics Data System (ADS)

    Chartier, R. T.; Greenslade, M. E.

    2012-04-01

    Atmospheric aerosols directly affect climate by scattering and absorbing radiation. The magnitude of the impact is dependent upon the wavelength of light, but is often estimated near 550 nm. When light scattering and absorption by aerosols is approximated, the wavelength dependence of the refractive index for specific components is lost. As a result, climate models would have inherent uncertainties for aerosol contributions to radiative forcing when considering the entire solar spectrum. An aerosol extinction differential optical absorption spectrometer has been developed to directly measure aerosol extinction at mid-ultraviolet to near infrared wavelengths. The instrument consists of a spectrometer coupled to a closed White-type multi-pass gas cell with an adjustable path length of up to approximately 20 m. Laboratory measurements of various gases are compared with known absorption cross sections. Additionally, the extinction of monodisperse samples of polystyrene latex spheres are measured and compared to Mie theory generated with refractive index values from the literature to validate the new instrument. The polystyrene experiments also emphasize the ability of the new instrument to retrieve the wavelength dependent refractive index, especially in the ultraviolet wavelength regions where variability is expected. The spectrometer will be a significant advancement for determining wavelength dependent complex refractive indices in future laboratory studies as well as provide the ability to monitor ambient aerosol light extinction.

  13. Initial investigation of the wavelength dependence of optical properties measured with a new multi-pass aerosol extinction differential optical absorption spectrometer (AE-DOAS)

    NASA Astrophysics Data System (ADS)

    Chartier, R. T.; Greenslade, M. E.

    2011-10-01

    Atmospheric aerosols directly affect climate by scattering and absorbing radiation. The magnitude of the impact is dependent upon the wavelength of light, but is often estimated near 550 nm. When light scattering and absorption by aerosols is approximated, the wavelength dependence of the refractive index for specific components is lost. As a result, climate models would have inherent uncertainties for aerosol contributions to radiative forcing when considering the entire solar spectrum. An aerosol extinction differential optical absorption spectrometer has been developed to directly measure aerosol extinction at mid-ultraviolet to near infrared wavelengths. The instrument consists of a spectrometer coupled to a closed White-type multi-pass gas cell with an adjustable path length of up to approximately 20 m. Laboratory measurements of various gases are compared with known absorption cross sections. Additionally, the extinction of monodisperse samples of polystyrene latex spheres are measured and compared to Mie theory generated with refractive index values from the literature to validate the new instrument. The polystyrene experiments also emphasize the ability of the new instrument to retrieve the wavelength dependent refractive index, especially in the ultraviolet wavelength regions where variability is expected. The spectrometer will be a significant advancement for determining wavelength dependent complex refractive indices in future laboratory studies as well as provide the ability to monitor ambient aerosol light extinction.

  14. Aerosol Optical Depth Measurements by Airborne Sun Photometer in SOLVE II: Comparisons to SAGE III, POAM III and Airborne Spectrometer Measurements

    NASA Technical Reports Server (NTRS)

    Russell, P.; Livingston, J.; Schmid, B.; Eilers, J.; Kolyer, R.; Redemann, J.; Ramirez, S.; Yee, J-H.; Swartz, W.; Shetter, R.

    2004-01-01

    The 14-channel NASA Ames Airborne Tracking Sunphotometer (AATS-14) measured solar-beam transmission on the NASA DC-8 during the Second SAGE III Ozone Loss and Validation Experiment (SOLVE II). This paper presents AATS-14 results for multiwavelength aerosol optical depth (AOD), including its spatial structure and comparisons to results from two satellite sensors and another DC-8 instrument. These are the Stratospheric Aerosol and Gas Experiment III (SAGE III), the Polar Ozone and Aerosol Measurement III (POAM III) and the Direct beam Irradiance Airborne Spectrometer (DIAS).

  15. Aerosol activation properties and CCN closure during TCAP

    NASA Astrophysics Data System (ADS)

    Mei, F.; Tomlinson, J. M.; Shilling, J. E.; Wilson, J. M.; Zelenyuk, A.; Chand, D.; Comstock, J. M.; Hubbe, J.; Berg, L. K.; Schmid, B.

    2013-12-01

    The indirect effects of atmospheric aerosols currently remain the most uncertain components in forcing of climate change over the industrial period (IPCC, 2007). This large uncertainty is partially due to our incomplete understanding of the ability of particles to form cloud droplets under atmospherically relevant supersaturation. In addition, there is a large uncertainty in the aerosol optical depth (AOD) simulated by climate models near the North American coast and a wide variety in the types of clouds are observed over this region. The goal of the US Department of Energy Two Column Aerosol Project (TCAP) is to understand the processes responsible for producing and maintaining aerosol distributions and associated radiative and cloud forcing off the coast of North America. During the TCAP study, aerosol total number concentration, cloud condensation nuclei (CCN) spectra and aerosol chemical composition were in-situ measured from the DOE Gulfstream 1 (G-1) research aircraft during two Intensive Operations Periods (IOPs), one conducted in July 2012 and the other in February 2013. An overall aerosol size distribution was achieved by merging the observations from several instruments, including Ultra High Sensitivity Aerosol Spectrometer - Airborne (UHSAS-A, DMT), Passive Cavity Aerosol Spectrometer Probe (PCASP-200, DMT), and Cloud Aerosol Spectrometer (CAS, DMT). Aerosol chemical composition was characterized using a high-resolution time-of-flight aerosol mass spectrometer (HR-ToF-AMS, Aerodyne Inc.) and single particle mass spectrometer, mini-SPLAT. Based on the aerosol size distribution, CCN number concentration (characterized by a DMT dual column CCN counter with a range from 0.1% to 0.4%), and chemical composition, a CCN closure was obtained. The sensitivity of CCN closure to organic hygroscopicity was investigated. The differences in aerosol/CCN properties between two columns, and between two phases, will be discussed.

  16. Characterization of submicron aerosols during a serious pollution month in Beijing (2013) using an aerodyne high-resolution aerosol mass spectrometer

    NASA Astrophysics Data System (ADS)

    Zhang, J. K.; Sun, Y.; Liu, Z. R.; Ji, D. S.; Hu, B.; Liu, Q.; Wang, Y. S.

    2013-07-01

    In January 2013, Beijing experienced several serious haze events. To achieve a better understanding of the characteristics, sources and processes of aerosols during this month, an Aerodyne High-Resolution Time-of-Flight Aerosol Mass Spectrometer (HR-ToF-AMS) was deployed at an urban site between 1 January and 1 February 2013 to obtain the size-resolved chemical composition of non-refractory submicron particles (NR-PM1). During this period, the mean measured NR-PM1 mass concentration was 87.4 μg m-3 and was composed of organics (49.8%), sulfate (21.4%), nitrate (14.6%), ammonium (10.4%), and chloride (3.8%). Moreover, inorganic matter, such as sulfate and nitrate comprised an increasing fraction of the NR-PM1 load as NR-PM1 loading increased, denoting their key roles in particulate pollution during this month. The average size distributions of the species were all dominated by an accumulation mode peaking at approximately 600 nm in vacuum aerodynamic diameter and organics characterized by an additional smaller size (∼200 nm). Elemental analyses showed that the average O/C, H/C, and N/C (molar ratio) of organic matter were 0.34, 1.44 and 0.015, respectively, corresponding to an OM/OC ratio (mass ratio of organic matter to organic carbon) of 1.60. Positive matrix factorization (PMF) analyses of the high-resolution organic mass spectral dataset differentiated the organic aerosol into four components, i.e., oxygenated organic aerosols (OOA), cooking-related (COA), nitrogen-containing (NOA) and hydrocarbon-like (HOA), which on average accounted for 40.0, 23.4, 18.1 and 18.5% of the total organic mass, respectively. Back trajectory clustering analyses indicated that the WNW air masses were associated with the highest NR-PM1 pollution during the campaign. Aerosol particles in southern air masses were especially rich in inorganic and oxidized organic species, whereas northern air masses contained a large fraction of primary species.

  17. Sources and atmospheric processing of winter aerosols in Seoul, Korea: insights from real-time measurements using a high-resolution aerosol mass spectrometer

    NASA Astrophysics Data System (ADS)

    Kim, Hwajin; Zhang, Qi; Bae, Gwi-Nam; Kim, Jin Young; Bok Lee, Seung

    2017-02-01

    Highly time-resolved chemical characterization of nonrefractory submicrometer particulate matter (NR-PM1) was conducted in Seoul, the capital and largest metropolis of Korea, using an Aerodyne high-resolution time-of-flight aerosol mass spectrometer (HR-ToF-AMS). The measurements were performed during winter, when elevated particulate matter (PM) pollution events are often observed. This is the first time that detailed real-time aerosol measurement results have been reported from Seoul, Korea, and they reveal valuable insights into the sources and atmospheric processes that contribute to PM pollution in this region. The average concentration of submicron aerosol (PM1 = NR-PM1+ black carbon (BC)) was 27.5 µg m-3, and the total mass was dominated by organics (44 %), followed by nitrate (24 %) and sulfate (10 %). The average atomic ratios of oxygen to carbon (O / C), hydrogen to carbon (H / C), and nitrogen to carbon (N / C) of organic aerosols (OA) were 0.37, 1.79, and 0.018, respectively, which result in an average organic mass-to-carbon (OM / OC) ratio of 1.67. The concentrations (2.6-90.7 µg m-3) and composition of PM1 varied dynamically during the measurement period due to the influences of different meteorological conditions, emission sources, and air mass origins. Five distinct sources of OA were identified via positive matrix factorization (PMF) analysis of the HR-ToF-AMS data: vehicle emissions represented by a hydrocarbon-like OA factor (HOA, O / C = 0.06), cooking activities represented by a cooking OA factor (COA, O / C = 0.14), wood combustion represented by a biomass burning OA factor (BBOA, O / C = 0.34), and secondary organic aerosol (SOA) represented by a semivolatile oxygenated OA factor (SV-OOA, O / C = 0.56) and a low-volatility oxygenated OA factor (LV-OOA, O / C = 0.68). On average, primary OA (POA = HOA + COA + BBOA) accounted for 59 % the OA mass, whereas SV-OOA and LV-OOA contributed 15 and 26 %, respectively. Our results indicate that air

  18. Low-level atmospheric radioactivity measurement using a NaI(Tl) spectrometer during aerosol sampling.

    PubMed

    Hýža, Miroslav; Rulík, Petr

    2016-12-22

    In order to increase the early warning ability of the radiation monitoring network of the Czech republic, a high-volume aerosol sampler was upgraded with a NaI(Tl) probe placed directly above the aerosol filter. The paper demonstrates the possibility of using a method based on principal component regression to accurately subtract the complicated natural background caused by radon decay products. This approach yielded minimum detectable activities of 8mBq/m(3), 3mBq/m(3) and 7mBq/m(3) for (131)I, (134)Cs and (137)Cs, respectively, after 24h of sampling.

  19. Characterization of particulate matter emissions from on-road gasoline and diesel vehicles using a soot particle aerosol mass spectrometer

    NASA Astrophysics Data System (ADS)

    Dallmann, T. R.; Onasch, T. B.; Kirchstetter, T. W.; Worton, D. R.; Fortner, E. C.; Herndon, S. C.; Wood, E. C.; Franklin, J. P.; Worsnop, D. R.; Goldstein, A. H.; Harley, R. A.

    2014-02-01

    Particulate matter (PM) emissions were measured in July 2010 from on-road motor vehicles driving through a highway tunnel in the San Francisco Bay area. A soot particle aerosol mass spectrometer (SP-AMS) was used to measure the chemical composition of PM emitted by gasoline and diesel vehicles at high time resolution. Organic aerosol (OA) and black carbon (BC) concentrations were measured during various time periods that had different levels of diesel influence, as well as directly in the exhaust plumes of individual heavy-duty (HD) diesel trucks. BC emission factor distributions for HD trucks were more skewed than OA distributions, with the highest 10% of trucks accounting for 56 and 42% of total measured BC and OA emissions, respectively. A comparison of measured OA and BC mass spectra across various sampling periods revealed a high degree of similarity in BC and OA emitted by gasoline and diesel engines. Cycloalkanes predominate in exhaust OA emissions relative to saturated alkanes (i.e., normal and iso-paraffins), suggesting that lubricating oil rather than fuel is the dominant source of primary organic aerosol (POA) emissions in diesel vehicle exhaust. This finding is supported by the detection of trace elements such as zinc and phosphorus in the exhaust plumes of individual trucks. Trace elements were emitted relative to total OA at levels that are consistent with typical weight fractions of commonly used additives present in lubricating oil. The presence of trace elements in vehicle exhaust raises the concern that ash deposits may accumulate over time in diesel particle filter systems, and may eventually lead to performance problems that require servicing.

  20. Characterization of particulate matter emissions from on-road gasoline and diesel vehicles using a soot particle aerosol mass spectrometer

    NASA Astrophysics Data System (ADS)

    Dallmann, T. R.; Onasch, T. B.; Kirchstetter, T. W.; Worton, D. R.; Fortner, E. C.; Herndon, S. C.; Wood, E. C.; Franklin, J. P.; Worsnop, D. R.; Goldstein, A. H.; Harley, R. A.

    2014-07-01

    Particulate matter (PM) emissions were measured in July 2010 from on-road motor vehicles driving through a highway tunnel in the San Francisco Bay area. A soot particle aerosol mass spectrometer (SP-AMS) was used to measure the chemical composition of PM emitted by gasoline and diesel vehicles at high time resolution. Organic aerosol (OA) and black carbon (BC) concentrations were measured during various time periods that had different levels of diesel influence, as well as directly in the exhaust plumes of individual heavy-duty (HD) diesel trucks. BC emission factor distributions for HD trucks were more skewed than OA distributions (N = 293), with the highest 10% of trucks accounting for 56 and 42% of total measured BC and OA emissions, respectively. OA mass spectra measured for HD truck exhaust plumes show cycloalkanes are predominate in exhaust OA emissions relative to saturated alkanes (i.e., normal and iso-paraffins), suggesting that lubricating oil rather than fuel is the dominant source of primary organic aerosol (POA) emissions in diesel vehicle exhaust. This finding is supported by the detection of trace elements such as zinc and phosphorus in the exhaust plumes of individual trucks. Trace elements were emitted relative to total OA at levels that are consistent with typical weight fractions of commonly used additives present in lubricating oil. A comparison of measured OA and BC mass spectra across various sampling periods revealed a high degree of similarity in OA and BC emitted by gasoline and diesel engines. This finding indicates a large fraction of OA in gasoline exhaust is lubricant-derived as well. The similarity in OA and BC mass spectra for gasoline and diesel engine exhaust is likely to confound ambient source apportionment efforts to determine contributions to air pollution from these two important sources.

  1. Characterization of a real-time tracer for isoprene epoxydiols-derived secondary organic aerosol (IEPOX-SOA) from aerosol mass spectrometer measurements

    NASA Astrophysics Data System (ADS)

    Hu, W. W.; Campuzano-Jost, P.; Palm, B. B.; Day, D. A.; Ortega, A. M.; Hayes, P. L.; Krechmer, J. E.; Chen, Q.; Kuwata, M.; Liu, Y. J.; de Sá, S. S.; McKinney, K.; Martin, S. T.; Hu, M.; Budisulistiorini, S. H.; Riva, M.; Surratt, J. D.; St. Clair, J. M.; Isaacman-Van Wertz, G.; Yee, L. D.; Goldstein, A. H.; Carbone, S.; Brito, J.; Artaxo, P.; de Gouw, J. A.; Koss, A.; Wisthaler, A.; Mikoviny, T.; Karl, T.; Kaser, L.; Jud, W.; Hansel, A.; Docherty, K. S.; Alexander, M. L.; Robinson, N. H.; Coe, H.; Allan, J. D.; Canagaratna, M. R.; Paulot, F.; Jimenez, J. L.

    2015-10-01

    Substantial amounts of secondary organic aerosol (SOA) can be formed from isoprene epoxydiols (IEPOX), which are oxidation products of isoprene mainly under low-NO conditions. Total IEPOX-SOA, which may include SOA formed from other parallel isoprene oxidation pathways, was quantified by applying positive matrix factorization (PMF) to aerosol mass spectrometer (AMS) measurements. The IEPOX-SOA fractions of organic aerosol (OA) in multiple field studies across several continents are summarized here and show consistent patterns with the concentration of gas-phase IEPOX simulated by the GEOS-Chem chemical transport model. During the Southern Oxidant and Aerosol Study (SOAS), 78 % of PMF-resolved IEPOX-SOA is accounted by the measured IEPOX-SOA molecular tracers (2-methyltetrols, C5-Triols, and IEPOX-derived organosulfate and its dimers), making it the highest level of molecular identification of an ambient SOA component to our knowledge. An enhanced signal at C5H6O+ (m/z 82) is found in PMF-resolved IEPOX-SOA spectra. To investigate the suitability of this ion as a tracer for IEPOX-SOA, we examine fC5H6O (fC5H6O= C5H6O+/OA) across multiple field, chamber, and source data sets. A background of ~ 1.7 ± 0.1 ‰ (‰ = parts per thousand) is observed in studies strongly influenced by urban, biomass-burning, and other anthropogenic primary organic aerosol (POA). Higher background values of 3.1 ± 0.6 ‰ are found in studies strongly influenced by monoterpene emissions. The average laboratory monoterpene SOA value (5.5 ± 2.0 ‰) is 4 times lower than the average for IEPOX-SOA (22 ± 7 ‰), which leaves some room to separate both contributions to OA. Locations strongly influenced by isoprene emissions under low-NO levels had higher fC5H6O (~ 6.5 ± 2.2 ‰ on average) than other sites, consistent with the expected IEPOX-SOA formation in those studies. fC5H6O in IEPOX-SOA is always elevated (12-40 ‰) but varies substantially between locations, which is shown to reflect

  2. Characterization of a real-time tracer for isoprene epoxydiols-derived secondary organic aerosol (IEPOX-SOA) from aerosol mass spectrometer measurements

    DOE PAGES

    Hu, W. W.; Campuzano-Jost, P.; Palm, B. B.; ...

    2015-10-23

    Substantial amounts of secondary organic aerosol (SOA) can be formed from isoprene epoxydiols (IEPOX), which are oxidation products of isoprene mainly under low-NO conditions. Total IEPOX-SOA, which may include SOA formed from other parallel isoprene oxidation pathways, was quantified by applying positive matrix factorization (PMF) to aerosol mass spectrometer (AMS) measurements. The IEPOX-SOA fractions of organic aerosol (OA) in multiple field studies across several continents are summarized here and show consistent patterns with the concentration of gas-phase IEPOX simulated by the GEOS-Chem chemical transport model. During the Southern Oxidant and Aerosol Study (SOAS), 78 % of PMF-resolved IEPOX-SOA is accountedmore » by the measured IEPOX-SOA molecular tracers (2-methyltetrols, C5-Triols, and IEPOX-derived organosulfate and its dimers), making it the highest level of molecular identification of an ambient SOA component to our knowledge. An enhanced signal at C5H6O+ (m/z 82) is found in PMF-resolved IEPOX-SOA spectra. To investigate the suitability of this ion as a tracer for IEPOX-SOA, we examine fC5H6O (fC5H6O= C5H6O+/OA) across multiple field, chamber, and source data sets. A background of ~ 1.7 ± 0.1 ‰ (‰ = parts per thousand) is observed in studies strongly influenced by urban, biomass-burning, and other anthropogenic primary organic aerosol (POA). Higher background values of 3.1 ± 0.6 ‰ are found in studies strongly influenced by monoterpene emissions. The average laboratory monoterpene SOA value (5.5 ± 2.0 ‰) is 4 times lower than the average for IEPOX-SOA (22 ± 7 ‰), which leaves some room to separate both contributions to OA. Locations strongly influenced by isoprene emissions under low-NO levels had higher fC5H6O (~ 6.5 ± 2.2 ‰ on average) than other sites, consistent with the expected IEPOX-SOA formation in those studies. fC5H6O in IEPOX-SOA is always elevated (12–40 ‰) but varies substantially between locations, which is shown

  3. Aerosol and Surface Parameter Retrievals for a Multi-Angle, Multiband Spectrometer

    NASA Technical Reports Server (NTRS)

    Broderick, Daniel

    2012-01-01

    This software retrieves the surface and atmosphere parameters of multi-angle, multiband spectra. The synthetic spectra are generated by applying the modified Rahman-Pinty-Verstraete Bidirectional Reflectance Distribution Function (BRDF) model, and a single-scattering dominated atmosphere model to surface reflectance data from Multiangle Imaging SpectroRadiometer (MISR). The aerosol physical model uses a single scattering approximation using Rayleigh scattering molecules, and Henyey-Greenstein aerosols. The surface and atmosphere parameters of the models are retrieved using the Lavenberg-Marquardt algorithm. The software can retrieve the surface and atmosphere parameters with two different scales. The surface parameters are retrieved pixel-by-pixel while the atmosphere parameters are retrieved for a group of pixels where the same atmosphere model parameters are applied. This two-scale approach allows one to select the natural scale of the atmosphere properties relative to surface properties. The software also takes advantage of an intelligent initial condition given by the solution of the neighbor pixels.

  4. Inverse modeling of biomass burning emissions using Total Ozone Mapping Spectrometer aerosol index for 1997

    NASA Astrophysics Data System (ADS)

    Zhang, Sophia; Penner, Joyce E.; Torres, Omar

    2005-11-01

    We present results from an inverse model study to determine biomass smoke emissions for the year 1997 by comparison of modeled aerosol index (AI) with that measured by the EP TOMS instrument. The IMPACT model with Data Assimilation Office (DAO) meteorology data in 1997 is utilized to obtain aerosol spatial and temporal distributions. Then a radiative transfer model is applied to generate the modeled AI. A Bayesian inverse technique is applied to optimize the difference between the modeled AI and the EP TOMS AI in the same period by regulating monthly a priori biomass smoke emissions in seven predefined regions. The modeled AI with a posteriori emissions is generally in better agreement with the EP TOMS AI. The a posteriori emissions from Indonesia increase by a factor of 8-10 over the a priori emissions due to the Indonesian fires in 1997. The annual total a posteriori source increases by about 13% for the year 1997 (6.31 Tg/yr black carbon and 67.27 Tg/yr smoke) in the base scenario, with a larger adjustment of monthly emissions. The sensitivity of this result to the a priori uncertainties, the height of the smoke layer, the cloud screening criteria, the inclusion of an adjustment of emissions outside the main biomass burning regions, and the inclusion of the covariances between observations in different locations is discussed in a set of sensitivity scenarios. The sensitivity scenarios suggest that the inverse model results are most sensitive to the assumed uncertainty for a priori emissions and the altitude of aerosol layer in the model and are less sensitive to other factors. In the scenario where the uncertainty of a priori emissions is increased to 100% (300% in Indonesia), the total annual black carbon emission is increased to 6.87 Tg/yr, and the smoke emission increases to 73.39 Tg/yr. The a posteriori emissions in Indonesia in the scenario with increased uncertainty are in better agreement with both the TOMS AI and with previous estimates for the

  5. Mixing state of particles with secondary species by single particle aerosol mass spectrometer in an atmospheric pollution event

    NASA Astrophysics Data System (ADS)

    Xu, Lingling; Chen, Jinsheng

    2016-04-01

    Single particle aerosol mass spectrometer (SPAMS) was used to characterize size distribution, chemical composition, and mixing state of particles in an atmospheric pollution event during 20 Oct. - 5 Nov., 2015 in Xiamen, Southeast China. A total of 533,012 particle mass spectra were obtained and clustered into six groups, comprising of industry metal (4.5%), dust particles (2.6%), carbonaceous species (70.7%), K-Rich particles (20.7%), seasalt (0.6%) and other particles (0.9%). Carbonaceous species were further divided into EC (70.6%), OC (28.5%), and mixed ECOC (0.9%). There were 61.7%, 58.3%, 4.0%, and 14.6% of particles internally mixed with sulfate, nitrate, ammonium and C2H3O, respectively, indicating that these particles had undergone significant aging processing. Sulfate was preferentially mixed with carbonaceous particles, while nitrate tended to mix with metal-containing and dust particles. Compared to clear days, the fractions of EC-, metal- and dust particles remarkably increased, while the fraction of OC-containing particles decreased in pollution days. The mixing state of particles, excepted for OC-containing particles with secondary species was much stronger in pollution days than that in clear days, which revealed the significant influence of secondary particles in atmospheric pollution. The different activity of OC-containing particles might be related to their much smaller aerodynamic diameter. These results could improve our understanding of aerosol characteristics and could be helpful to further investigate the atmospheric process of particles.

  6. Electrical Mobility Spectrometer Using a Diethylene Glycol Condensation Particle Counter for Measurement of Aerosol Size Distributions Down to 1 nm

    SciTech Connect

    Jiang, J.; Kuang, C.; Chen, M.; Attoui, M.; McMurry, P. H.

    2011-02-01

    We report a new scanning mobility particle spectrometer (SMPS) for measuring number size distributions of particles down to {approx}1 nm mobility diameter. This SMPS includes an aerosol charger, a TSI 3085 nano differential mobility analyzer (nanoDMA), an ultrafine condensation particle counter (UCPC) using diethylene glycol (DEG) as the working fluid, and a conventional butanol CPC (the 'booster') to detect the small droplets leaving the DEG UCPC. The response of the DEG UCPC to negatively charged sodium chloride particles with mobility diameters ranging from 1-6 nm was measured. The sensitivity of the DEG UCPC to particle composition was also studied by comparing its response to positively charged 1.47 and 1.70 nm tetra-alkyl ammonium ions, sodium chloride, and silver particles. A high resolution differential mobility analyzer was used to generate the test particles. These results show that the response of this UCPC to sub-2 nm particles is sensitive to particle composition. The applicability of the new SMPS for atmospheric measurement was demonstrated during the Nucleation and Cloud Condensation Nuclei (NCCN) field campaign (Atlanta, Georgia, summer 2009). We operated the instrument at saturator and condenser temperatures that allowed the efficient detection of sodium chloride particles but not of air ions having the same mobility. We found that particles as small as 1 nm were detected during nucleation events but not at other times. Factors affecting size distribution measurements, including aerosol charging in the 1-10 nm size range, are discussed. For the charger used in this study, bipolar charging was found to be more effective for sub-2 nm particles than unipolar charging. No ion induced nucleation inside the charger was observed during the NCCN campaign.

  7. Aerosols

    Atmospheric Science Data Center

    2013-04-17

    ... article title:  Aerosols over Central and Eastern Europe     View Larger Image ... last weeks of March 2003, widespread aerosol pollution over Europe was detected by several satellite-borne instruments. The Multi-angle ...

  8. Design Of A Novel Open-Path Aerosol Extinction Cavity Ringdown Spectrometer And Initial Data From Deployment At NOAA's Atmospheric Observatory

    NASA Astrophysics Data System (ADS)

    Gordon, T. D.; Wagner, N. L.; Richardson, M.; Law, D. C.; Wolfe, D. E.; Brock, C. A.; Erdesz, F.; Murphy, D. M.

    2014-12-01

    The ability to frame effective climate change policy depends strongly on reducing the uncertainty in aerosol radiative forcing, which is currently nearly as great as best estimates of its magnitude. Achieving this goal will require significant progress in measuring aerosol properties, including aerosol optical depth, single scattering albedo and the effect of relative humidity on these properties for both fine and coarse particles. However both ground- and space-based instruments fail or are highly biased in the presence of clouds, severely limiting quantitative estimates of the radiative effects of aerosols where they are advected over low-level clouds. Moreover, many in situ aerosol measurements exclude the coarse fraction, which can be very important in and downwind of desert regions. By measuring the decay rate of a pulsed laser in an optically resonant cavity, cavity ringdown spectrometers (CRDSs) have been employed successfully in measuring aerosol extinction for particles in relative humidities below 90%. At very high humidities (as found in and near clouds), however, existing CRDSs perform poorly, diverging significantly from theoretical extinction values as humidities approach 100%. The new open-path aerosol extinction CRDS described in this poster measures extinction as aerosol is drawn through the sample cavity directly without inlets or tubing for channeling the flow, which cause particle losses, condensation at high RH and other artifacts. This poster presents the key elements of the new open-path CRDS design as well as comparisons with an earlier generation closed-path CRDS and preliminary data obtained during a field study at the 300 meter tower at NOAA's Boulder Atmospheric Observatory (BAO) in Colorado.

  9. Evaluation of machine learning algorithms for classification of primary biological aerosol using a new UV-LIF spectrometer

    NASA Astrophysics Data System (ADS)

    Ruske, Simon; Topping, David O.; Foot, Virginia E.; Kaye, Paul H.; Stanley, Warren R.; Crawford, Ian; Morse, Andrew P.; Gallagher, Martin W.

    2017-03-01

    Characterisation of bioaerosols has important implications within environment and public health sectors. Recent developments in ultraviolet light-induced fluorescence (UV-LIF) detectors such as the Wideband Integrated Bioaerosol Spectrometer (WIBS) and the newly introduced Multiparameter Bioaerosol Spectrometer (MBS) have allowed for the real-time collection of fluorescence, size and morphology measurements for the purpose of discriminating between bacteria, fungal spores and pollen.This new generation of instruments has enabled ever larger data sets to be compiled with the aim of studying more complex environments. In real world data sets, particularly those from an urban environment, the population may be dominated by non-biological fluorescent interferents, bringing into question the accuracy of measurements of quantities such as concentrations. It is therefore imperative that we validate the performance of different algorithms which can be used for the task of classification.For unsupervised learning we tested hierarchical agglomerative clustering with various different linkages. For supervised learning, 11 methods were tested, including decision trees, ensemble methods (random forests, gradient boosting and AdaBoost), two implementations for support vector machines (libsvm and liblinear) and Gaussian methods (Gaussian naïve Bayesian, quadratic and linear discriminant analysis, the k-nearest neighbours algorithm and artificial neural networks).The methods were applied to two different data sets produced using the new MBS, which provides multichannel UV-LIF fluorescence signatures for single airborne biological particles. The first data set contained mixed PSLs and the second contained a variety of laboratory-generated aerosol.Clustering in general performs slightly worse than the supervised learning methods, correctly classifying, at best, only 67. 6 and 91. 1 % for the two data sets respectively. For supervised learning the gradient boosting algorithm was

  10. In Situ Aerosol Properties Measured over the California Central Valley and the Sierra Nevada Mountain Range

    NASA Astrophysics Data System (ADS)

    Tomlinson, J. M.; Comstock, J. M.; Hubbe, J.; Kluzek, C.; Schmid, B.; Jonsson, H.; Woods, R.

    2011-12-01

    Anthropogenic aerosols are hypothesized to influence the formation of clouds and precipitation amounts within the Sierra Nevada Mountains. This could have a profound effect on the California water supply. To study this phenomena, an Ultra High Sensitivity Aerosol Spectrometer (UHSAS), Passive Cavity Aerosol Spectrometer (PCASP), and Cloud Aerosol Spectrometer (CAS) were operated aboard the Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) Aerial Facility (AAF) Gulfstream-1 aircraft from February 2 to March 6, 2011 during the CalWater field campaign. The combined aerosol size distribution from the three instruments characterizes the size-resolved concentration of the submicron and supermicron aerosol over the California Central Valley and Sierra Nevada Mountain Range. The measured aerosol size distributions from CalWater are compared with the size distributions measured during the DOE Carbonaceous Aerosol and Radiative Effects Study (CARES) in June 2010 to determine the changes in the aerosol size distributions during different seasons, atmospheric river events, and long-range transport events from Asia. These changes are used to estimate the resulting aerosol effect on cloud condensation nuclei concentrations and the potential impact on cloud formation and precipitation.

  11. El Chichon and 'mystery cloud' aerosols between 30 and 55 km Global observations from the SME visible spectrometer

    NASA Technical Reports Server (NTRS)

    Clancy, R. T.

    1986-01-01

    Visible limb radiances measured by the Solar Mesosphere Explorer (SME) are used to obtain volume scattering ratios for aerosol loading in the 30-55 km altitude range of the stratosphere. Global maps of these ratios are presented for the period January 1982 to August 1984. Significant aerosol scattering from the 'mystery cloud' and El Chichon aerosol layers are found above 30 km. A timescale of approximately 2 months between the appearance of the aerosol at 30.5 km and at 37.5 km is consistent with vertical transport of aerosol or vapor by eddy diffusion above 30 km. An anticorrelation exists between aerosol scattering and stratospheric temperatures. Periods of lower stratospheric temperatures may account for the formation of aerosol between 40 and 55 km altitude.

  12. Initial Assessment of the Spectrometer for Sky-Scanning, Sun-Tracking Atmospheric Research (4STAR)-Based Aerosol Retrieval: Sensitivity Study

    SciTech Connect

    Kassianov, Evgueni I.; Flynn, Connor J.; Redemann, Jens; Schmid, Beat; Russell, P. B.; Sinyuk, Alexander

    2012-10-24

    The Spectrometer for Sky-Scanning, Sun-Tracking Atmospheric Research (4STAR) being developed for airborne measurements will offer retrievals of aerosol microphysical and optical properties from multi-angular and multi-spectral measurements of sky radiance and direct-beam sun transmittance. In this study, we assess the expected accuracy of the 4STAR-based aerosol retrieval and its sensitivity to major sources of anticipated perturbations in the 4STAR measurements by adapting a theoretical approach previously developed for the AERONET measurements. The major anticipated perturbations are (1) an apparent enhancement of sky radiance at small scattering angles associated with the necessarily compact design of the 4STAR and (2) and an offset (i.e. uncertainty) of sky radiance calibration independent of scattering angle. The assessment is performed through application of the operational AERONET aerosol retrieval and constructed synthetic 4STAR-like data. Particular attention is given to the impact of these perturbations on the upwelling and downwelling broadband fluxes and the direct aerosol radiative forcing at the bottom and top of the atmosphere. The results from this study suggest that limitations in the accuracy of 4STAR-retrieved particle size distributions and scattering phase functions have diminished impact on the accuracy of retrieved bulk microphysical parameters, permitting quite accurate retrievals of properties including the effective radius (up to 10%, or 0.03), and the radiatively important optical properties, such as the asymmetry factor (up to 4%, or ±0.02) and single-scattering albedo (up to 6%, or ±0.04). Also, the obtained results indicate that the uncertainties in the retrieved aerosol optical properties are quite small in the context of the calculated fluxes and direct aerosol radiative forcing (up to 15%, or 3 Wm-2).

  13. In-Flight Chemical Composition Observations of Aircraft Emissions using a High-Resolution Time-of-Flight Aerosol Mass Spectrometer

    NASA Astrophysics Data System (ADS)

    Ziemba, L. D.; Martin, R.; Moore, R.; Shook, M.; Thornhill, K. L., II; Winstead, E.; Anderson, B. E.

    2015-12-01

    Commercial aircraft are an important source of aerosols to the upper troposphere. The microphysical and chemical properties of these emitted aerosols govern their ability to act as ice nuclei, both in near-field contrails and for cirrus formation downstream. During the ACCESS-II (Alternative Fuel Effects on Contrails and Cruise Emissions) campaign, NASA DC-8 CFM56-2-C1 engine emissions were sampled systematically at a range of cruise-relevant thrust levels and at several altitudes. Sampling was done aboard the NASA HU-25 Falcon aircraft, which was equipped with a suite of aerosol and gas-phase instruments focused on assessing the effects of burning different fuel mixtures on aerosol properties and their associated contrails. Here we present in-flight measurements of particle chemical composition made by a High-Resolution Time-of-Flight Aerosol Mass Spectrometer (HR-ToF-AMS). The AMS was able to sufficiently resolve near-field (within 100m) aircraft emissions plumes. Low-sulfur HEFA (hydro-processed esters and fatty-acids) and JetA fuels yielded particles that contained 11 and 8% sulfate, respectively, compared to 30% sulfate contribution for traditional JetA fuel. Each of the fuels produced organic aerosol with similarly low oxygen content. Lubrication oils, which are not a combustion product but result from leaks in the engine, were likely a dominant fraction of the measured organic mass based on mass-spectral marker analysis. These results are compared to similar engine conditions from ground-based testing.

  14. Collection efficiency of the soot-particle aerosol mass spectrometer (SP-AMS) for internally mixed particulate black carbon

    DOE PAGES

    Willis, M. D.; Lee, A. K. Y.; Onasch, T. B.; ...

    2014-12-18

    The soot-particle aerosol mass spectrometer (SP-AMS) uses an intra-cavity infrared laser to vaporize refractory black carbon (rBC) containing particles, making the particle beam–laser beam overlap critical in determining the collection efficiency (CE) for rBC and associated non-refractory particulate matter (NR-PM). This work evaluates the ability of the SP-AMS to quantify rBC and NR-PM mass in internally mixed particles with different thicknesses of organic coating. Using apparent relative ionization efficiencies for uncoated and thickly coated rBC particles, we report measurements of SP-AMS sensitivity to NR-PM and rBC, for Regal Black, the recommended particulate calibration material. Beam width probe (BWP) measurements aremore » used to illustrate an increase in sensitivity for highly coated particles due to narrowing of the particle beam, which enhances the CE of the SP-AMS by increasing the laser beam–particle beam overlap. Assuming complete overlap for thick coatings, we estimate CE for bare Regal Black particles of 0.6 ± 0.1, which suggests that previously measured SP-AMS sensitivities to Regal Black were underestimated by up to a factor of 2. The efficacy of the BWP measurements is highlighted by studies at a busy road in downtown Toronto and at a non-roadside location, which show particle beam widths similar to, but greater than that of bare Regal Black and coated Regal Black, respectively. Further BWP measurements at field locations will help to constrain the range of CE for fresh and aged rBC-containing particles. The ability of the SP-AMS to quantitatively assess the composition of internally mixed particles is validated through measurements of laboratory-generated organic coated particles, which demonstrate that the SP-AMS can quantify rBC and NR-PM over a wide range of particle compositions and rBC core sizes.« less

  15. Integrated Analyses of Multiple Worldwide Aerosol Mass Spectrometer Datasets for Improved Understanding of Aerosol Sources and Processes and for Comparison with Global Models

    SciTech Connect

    Zhang, Qi; Jose, Jimenez Luis

    2014-04-28

    The AMS is the only current instrument that provides real-time, quantitative, and size-resolved data on submicron non-refractory aerosol species with a time resolution of a few minutes or better. The AMS field data are multidimensional and massive, containing extremely rich information on aerosol chemistry, microphysics and dynamics—basic information that is required to evaluate and quantify the radiative climate forcing of atmospheric aerosols. The high time resolution of the AMS data also reveals details of aerosol dynamic variations that are vital to understanding the physico-chemical processes of atmospheric aerosols that govern aerosol properties relevant to the climate. There are two primary objectives of this 3-year project. Our first objective is to perform highly integrated analysis of dozens of AMS datasets acquired from various urban, forested, coastal, marine, mountain peak, and rural/remote locations around the world and synthesize and inter-compare results with a focus on the sources and the physico-chemical processes that govern aerosol properties relevant to aerosol climate forcing. Our second objective is to support our collaboration with global aerosol modelers, in which we will supply the size-resolved aerosol composition and temporal variation data (via a public web interface) and our analysis results for use in model testing and validation and for translation of the rich AMS database into model constraints that can improve climate forcing simulations. Several prominent global aerosol modelers have expressed enthusiastic support for this collaboration. The specific tasks that we propose to accomplish include 1) to develop, validate, and apply multivariate analysis techniques for improved characterization and source apportionment of organic aerosols; 2) to evaluate aerosol source regions and relative contributions based on back-trajectory integration (PSCF method); 3) to summarize and synthesize submicron aerosol information, including

  16. Evidence for Natural Variability in Marine Stratocumulus Cloud Properties Due to Cloud-Aerosol

    NASA Technical Reports Server (NTRS)

    Albrecht, Bruce; Sharon, Tarah; Jonsson, Haf; Minnis, Patrick; Minnis, Patrick; Ayers, J. Kirk; Khaiyer, Mandana M.

    2004-01-01

    In this study, aircraft observations from the Interdisciplinary Remotely-Piloted Aircraft Studies (CIRPAS) Twin Otter are used to characterize the variability in drizzle, cloud, and aerosol properties associated with cloud rifts and the surrounding solid clouds observed off the coast of California. A flight made on 16 July 1999 provided measurements directly across an interface between solid and rift cloud conditions. Aircraft instrumentation allowed for measurements of aerosol, cloud droplet, and drizzle spectra. CCN concentrations were measured in addition to standard thermodynamic variables and the winds. A Forward Scatter Spectrometer Probe (FSSP) measured size distribution of cloud-sized droplets. A Cloud Imaging Probe (CIP) was used to measure distributions of drizzle-sized droplets. Aerosol distributions were obtained from a Cloud Aerosol Scatterprobe (CAS). The CAS probe measured aerosols, cloud droplets and drizzle-sized drops; for this study. The CAS probe was used to measure aerosols in the size range of 0.5 micron - 1 micron. Smaller aerosols were characterized using an Ultrafine Condensation Particle Counter (CPC) sensor. The CPC was used to measure particles with diameters greater than 0.003 micron. By subtracting different count concentrations measured with the CPC, this probe was capable of identifying ultrafine particles those falling in the size range of 3 nanometers - 7 nanometers that are believed to be associated with new particle production.

  17. Comparison of the Grimm 1.108 and 1.109 portable aerosol spectrometer to the TSI 3321 aerodynamic particle sizer for dry particles.

    PubMed

    Peters, Thomas M; Ott, Darrin; O'Shaughnessy, Patrick T

    2006-11-01

    This study compared the response of two optical particle counters with that of an aerodynamic particle sizer. The optical particle counters rely on the amount of incident light scattered at 90 degrees by a particle to measure particle number concentration by optical particle size. Two models of optical particle counters from Grimm Technologies were used: the portable aerosol spectrometer (PAS) 1.108 (0.3-20 microm in 15 channels); and the PAS 1.109 (0.2-20 microm in 30 size channels). With a substantially different operating principle from that employed by the optical particle counters, the aerodynamic particle sizer (APS) model 3321 (TSI, Inc., St Paul, MN, USA) sizes particles according to their behavior in an accelerating flow to provide particle number concentration by aerodynamic size over a slightly narrower size range (0.5-20 microm) in 52 channels. The responses of these instruments were compared for three sizes of monodisperse solid aerosols composed of polystyrene latex spheres and a polydisperse aerosol composed of Arizona test dust. The PASs provided similar results to those from the APS. However, there were systematic differences among instruments in number and mass concentration measurement that depended upon particle size.

  18. Single particle characterization using a light scattering module coupled to a time-of-flight aerosol mass spectrometer

    SciTech Connect

    Cross, E.; Onasch, Timothy B.; Canagaratna, Manjula; Jayne, J. T.; Kimmel, Joel; Yu, Xiao-Ying; Alexander, M. L.; Worsnop, Douglas R.; Davidovits, Paul

    2009-10-01

    To accurately model the radiative forcing of aerosol particles, one must measure in real-time the size, shape, density, chemical composition, and mixing state of ambient particles. This is a formidable challenge because the chemical and physical properties of the aerosol particles are highly complex, dependent on the emission sources, the geography and meteorology of the surroundings, and the gas phase composition of the regional atmosphere.

  19. A fast integrated mobility spectrometer for rapid measurement of sub-micrometer aerosol size distribution, Part I: Design and model evaluation

    DOE PAGES

    Wang, Jian; Pikridas, Michael; Spielman, Steven R.; ...

    2017-06-01

    This study discusses, a fast integrated mobility spectrometer (FIMS) was previously developed to characterize submicron aerosol size distributions at a frequency of 1 Hz and with high size resolution and counting statistics. However, the dynamic size range of the FIMS was limited to one decade in particle electrical mobility. It was proposed that the FIMS dynamic size range can be greatly increased by using a spatially varying electric field. This electric field creates regions with drastically different field strengths in the separator, such that particles of a wide diameter range can be simultaneously classified and subsequently measured. A FIMS incorporatingmore » this spatially varying electric field is developed. This paper describes the theoretical frame work and numerical simulations of the FIMS with extended dynamic size range, including the spatially varying electric field, particle trajectories, activation of separated particles in the condenser, and the transfer function, transmission efficiency, and mobility resolution. The influences of the particle Brownian motion on FIMS transfer function and mobility resolution are examined. The simulation results indicate that the FIMS incorporating the spatially varying electric field is capable of measuring aerosol size distribution from 8 to 600 nm with high time resolution. As a result, the experimental characterization of the FIMS is presented in an accompanying paper.« less

  20. Response of the climatic temperature to dust forcing, inferred from total ozone mapping spectrometer (TOMS) aerosol index and the NASA assimilation model

    NASA Astrophysics Data System (ADS)

    Alpert, P.; Herman, J.; Kaufman, Y. J.; Carmona, I.

    Recently, Alpert et al. (Alpert, P., Shay-El, Y., Kaufman, Y.J., Tanre, D., DaSilva, A., Schubert, S., Joseph, J.H., 1998. Quantification of dust-forced heating of the lower troposphere, Nature 395 (6700), 367-370, (24 September).) suggested an indirect measure of the tropospheric temperature response to dust aerosols by using model updates — roughly speaking model errors — of the NASA Goddard Earth Observing System version No. 1 (GEOS-1) data assimilation system. They have shown that these updates, which provide information about missing physical processes not included in the predictive model, have monthly mean patterns, which bear a striking similarity to patterns of dust over the Atlantic. This similarity in the number of dusty days was used to estimate the atmospheric response to dust. Here, the study is extended for all the major subtropical deserts over Africa and Asia using the total ozone mapping spectrometer (TOMS) aerosol index ( AI) for dust recently derived by Herman et al. (Herman, J.R., Bhartia, P.K., Torres, O., Hsu, C., Seftor, C., Celarier, E., 1997. Global distribution of UV-absorbing aerosols from Nimbus 7/TOMS data, J. Geophys. Res. 102, 16911-16922.). It is shown that the TOMS dust is highly correlated with the model errors with a maximum at the altitude of about 580 hPa and for the month of June with average correlation coefficient of 0.69 reaching up to 0.8 for specific months. In contrast to the previous study where only dust over ocean was employed, here, much higher dust concentrations are detected and the linear heating for weak dust becomes quickly saturated for AI above 1.5, then drops for very high values of AI that exceed about 3. This result is consistent with the theoretical predictions.

  1. Observations of Processed Asian Pollution with a High-Resolution Time-of-Flight Aerosol Mass Spectrometer (HR-ToF-AMS) from the C-130 Aircraft During the INTEX-B Field Campaign

    NASA Astrophysics Data System (ADS)

    Dunlea, E.; Decarlo, P.; Aiken, A.; Kimmel, J.; Bahreini, R.; Peltier, R.; Weber, R.; Tomlinson, J.; Collins, D.; Shinozuka, Y.; Howell, S.; Clarke, A.; Emmons, L.; Apel, E.; Pfister, G.; van Donkelaar, A.; Millet, D.; Jimenez, J.

    2007-12-01

    Measurements of submicron, non-refractory aerosol mass were made from the NCAR/NSF C-130 aircraft using a High-Resolution Time-of-Flight Aerosol Mass Spectrometer (HR-ToF-AMS) during the spring 2006 INTEX-B field campaign based in Seattle. We intercepted numerous Asian pollution layers, some after rapid transport across the Pacific and others after slower transport which had reduced aerosol concentrations and were depleted of short-lived tracers. The aerosol in Asian pollution layers intercepted over the Eastern Pacific Ocean was shown to have a predominance of sulfate over organic material, the latter being highly oxidized. Measurements and back trajectory calculations are consistent with the following sequence: (a) relatively more rapid conversion of organic precursors to organic aerosol compared to conversion of SO2 to sulfate just downwind of Asian urban centers and pollution sources, (b) uplift and transport of air masses resulting in washout of most aerosol material leaving relatively more SO2 available, and (c) subsequent SO2 to sulfate conversion as air masses are transported across the Pacific. This is consistent with Brock et al., JGR, 2004. Two case studies will be presented to describe this evolution of aerosol chemical composition during transport from Asia. Overall correlations of several tracers will be shown for comparing MOZART and GEOS-Chem model outputs with the measurements. Also, comparisons of AMS measurements with other aerosol instruments will be shown.

  2. Optical and physical properties of stratospheric aerosols from balloon measurements in the visible and near-infrared domains. 1. Analysis of aerosol extinction spectra from the AMON and SALOMON balloonborne spectrometers.

    PubMed

    Berthet, Gwenaël; Renard, Jean-Baptiste; Brogniez, Colette; Robert, Claude; Chartier, Michel; Pirre, Michel

    2002-12-20

    Aerosol extinction coefficients have been derived in the 375-700-nm spectral domain from measurement in the stratosphere since 1992, at night, at mid- and high latitudes from 15 to 40 km, by two balloonborne spectrometers, Absorption par les Minoritaires Ozone et NO(chi) (AMON) and Spectroscopie d'Absorption Lunaire pour l'Observation des Minoritaires Ozone et NO(chi) (SALOMON). Log-normal size distributions associated with the Mie-computed extinction spectra that best fit the measurements permit calculation of integrated properties of the distributions. Although measured extinction spectra that correspond to background aerosols can be reproduced by the Mie scattering model by use of monomodal log-normal size distributions, each flight reveals some large discrepancies between measurement and theory at several altitudes. The agreement between measured and Mie-calculated extinction spectra is significantly improved by use of bimodal log-normal distributions. Nevertheless, neither monomodal nor bimodal distributions permit correct reproduction of some of the measured extinction shapes, especially for the 26 February 1997 AMON flight, which exhibited spectral behavior attributed to particles from a polar stratospheric cloud event.

  3. Optical and physical properties of stratospheric aerosols from balloon measurements in the visible and near-infrared domains. I. Analysis of aerosol extinction spectra from the AMON and SALOMON balloonborne spectrometers

    NASA Astrophysics Data System (ADS)

    Berthet, Gwenaël; Renard, Jean-Baptiste; Brogniez, Colette; Robert, Claude; Chartier, Michel; Pirre, Michel

    2002-12-01

    Aerosol extinction coefficients have been derived in the 375-700-nm spectral domain from measurements in the stratosphere since 1992, at night, at mid- and high latitudes from 15 to 40 km, by two balloonborne spectrometers, Absorption par les Minoritaires Ozone et NOx (AMON) and Spectroscopie d'Absorption Lunaire pour l'Observation des Minoritaires Ozone et NOx (SALOMON). Log-normal size distributions associated with the Mie-computed extinction spectra that best fit the measurements permit calculation of integrated properties of the distributions. Although measured extinction spectra that correspond to background aerosols can be reproduced by the Mie scattering model by use of monomodal log-normal size distributions, each flight reveals some large discrepancies between measurement and theory at several altitudes. The agreement between measured and Mie-calculated extinction spectra is significantly improved by use of bimodal log-normal distributions. Nevertheless, neither monomodal nor bimodal distributions permit correct reproduction of some of the measured extinction shapes, especially for the 26 February 1997 AMON flight, which exhibited spectral behavior attributed to particles from a polar stratospheric cloud event.

  4. A field measurement based scaling approach for quantification of major ions, organic carbon, and elemental carbon using a single particle aerosol mass spectrometer

    NASA Astrophysics Data System (ADS)

    Zhou, Yang; Huang, X. H. Hilda; Griffith, Stephen M.; Li, Mei; Li, Lei; Zhou, Zhen; Wu, Cheng; Meng, Junwang; Chan, Chak K.; Louie, Peter K. K.; Yu, Jian Zhen

    2016-10-01

    Single Particle Aerosol Mass Spectrometers (SPAMS) have been increasingly deployed for aerosol studies in Asia. To date, SPAMS is most often used to provide unscaled information for both the size and chemical composition of individual particles. The instrument's lack of accuracy is primarily due to only a fraction of particles being detected after collection, and the instrumental sensitivity is un-calibrated for various chemical species in mixed ambient aerosols. During a campaign from January to April 2013 at a coastal site in Hong Kong, the particle number information and ion intensity of major PM2.5 components collected by SPAMS were scaled by comparing with collocated bulk PM2.5 measurements of hourly or higher resolution. The bulk measurements include PM2.5 mass by a SHARP 5030 Monitor, major ions by a Monitor for Aerosols & Gases in ambient Air (MARGA), and organic carbon (OC) and elemental carbon (EC) by a Sunset OCEC analyzer. During the data processing, both transmission efficiency (scaled with the Scanning Mobility Particle Sizer) and hit efficiency conversion were considered, and component ion intensities quantified as peak area (PA) and relative peak area (RPA) were analyzed to track the performance. The comparison between the scaled particle mass assuming a particle density of 1.9 g cm-3 from SPAMS and PM2.5 concentration showed good correlation (R2 = 0.81) with a slope of 0.814 ± 0.004. Regression analysis results suggest an improved scaling performance using RPA compared with PA for most of the major PM2.5 components, including sulfate, nitrate, potassium, ammonium, OC and EC. Thus, we recommend preferentially scaling these species using the RPA. For periods of high K+ concentrations (>1.5 μg m-3), under-estimation of K+ by SPAMS was observed due to exceeding the dynamic range of the acquisition board. When only applying the hit efficiency correction, data for sulfate, nitrate, ammonium, potassium and OC were in reasonably good correlation (R2 = 0

  5. Dual-wavelength-excitation single-particle fluorescence spectrometer/particle sorter for real-time measurement of organic carbon and biological aerosols

    NASA Astrophysics Data System (ADS)

    Pan, Yong-Le; Pinnick, Ron G.; Hill, Steven C.; Huang, Hermes; Chang, Richard K.

    2008-10-01

    We report the development of a Single-Particle Fluorescence Spectrometer (SPFS) system capable of measuring two UV-laser excited fluorescence spectra from a single particle on-the-fly. The two dispersed fluorescence spectra are obtained from excitation by two lasers at different wavelengths (263 nm and 351 nm). The SPFS samples single particles with sizes primarily in the 1-10 μm range. The fluorescence spectra are recorded from 280 nm to 600 nm (in 20 channels) for 263 nm excitation and from 370 nm to 700 nm (in 22 channels) for 351 nm excitation. The elastic scattering (channel 4 and 9) is also recorded for sizing each particle. A time stamp for single particles is marked with a variable time interval resolution from 10 ms to 10 minutes. The SPFS employs a virtual-impactor concentrator to concentrate respirable-sized particles with a resulting (size-dependent) effective flow rate of around 100 liters/min. The SPFS can measure single-particle spectra at a maximum rate of 90,000/sec, although the highest rates we have experienced for the ambient are only several hundred/sec. When the SPFS is combined with an aerodynamic deflector (puffer) to sort particles according to their fluorescence spectral characteristics, the SPFS/puffer system can selectively deflect and collect an enriched sample of targeted particles (at rates limited by the puffer) of 1200 particles/sec, for further examination. In laboratory tests, aerosol particles with similar UV-LIF spectra (e.g. B. subtilis and E.coli) are puffed into the reservoir of a micro-fluidic cell, where fluorescent-labeled antibodies bind to them and were classified by their labeled fluorescence. Measurements of the background ambient aerosol with the SPFS system made at sites with different regional climate (Connecticut, Maryland, and New Mexico) were clustered (unstructured hierarchical analysis) into 8-10 groups, with over 90% of all the fluorescent particles contained within these clusters (threshold dot product=0

  6. Effective Henry's law partitioning and the salting constant of glyoxal in aerosols containing sulfate.

    PubMed

    Kampf, Christopher J; Waxman, Eleanor M; Slowik, Jay G; Dommen, Josef; Pfaffenberger, Lisa; Praplan, Arnaud P; Prévôt, André S H; Baltensperger, Urs; Hoffmann, Thorsten; Volkamer, Rainer

    2013-05-07

    The reversible partitioning of glyoxal was studied in simulation chamber experiments for the first time by time-resolved measurements of gas-phase and particle-phase concentrations in sulfate-containing aerosols. Two complementary methods for the measurement of glyoxal particle-phase concentrations are compared: (1) an offline method utilizing filter sampling of chamber aerosols followed by HPLC-MS/MS analysis and (2) positive matrix factorization (PMF) analysis of aerosol mass spectrometer (AMS) data. Ammonium sulfate (AS) and internally mixed ammonium sulfate/fulvic acid (AS/FA) seed aerosols both show an exponential increase of effective Henry's law coefficients (KH,eff) with AS concentration (cAS, in mol kg(-1) aerosol liquid water, m = molality) and sulfate ionic strength, I(SO4(2-)) (m). A modified Setschenow plot confirmed that "salting-in" of glyoxal is responsible for the increased partitioning. The salting constant for glyoxal in AS is K(S)CHOCHO = (-0.24 ± 0.02) m(-1), and found to be independent of the presence of FA. The reversible glyoxal uptake can be described by two distinct reservoirs for monomers and higher molecular weight species filling up at characteristic time constants. These time constants are τ1 ≈ 10(2) s and τ2 ≈ 10(4) s at cAS < 12 m, and about 1-2 orders of magnitude slower at higher cAS, suggesting that glyoxal uptake is kinetically limited at high salt concentrations.

  7. Effect of secondary organic aerosol coating thickness on the real-time detection and characterization of biomass-burning soot by two particle mass spectrometers

    NASA Astrophysics Data System (ADS)

    Ahern, Adam T.; Subramanian, Ramachandran; Saliba, Georges; Lipsky, Eric M.; Donahue, Neil M.; Sullivan, Ryan C.

    2016-12-01

    Biomass burning is a large source of light-absorbing refractory black carbon (rBC) particles with a wide range of morphologies and sizes. The net radiative forcing from these particles is strongly dependent on the amount and composition of non-light-absorbing material internally mixed with the rBC and on the morphology of the mixed particles. Understanding how the mixing state and morphology of biomass-burning aerosol evolves in the atmosphere is critical for constraining the influence of these particles on radiative forcing and climate. We investigated the response of two commercial laser-based particle mass spectrometers, the vacuum ultraviolet (VUV) ablation LAAPTOF and the IR vaporization SP-AMS, to monodisperse biomass-burning particles as we sequentially coated the particles with secondary organic aerosol (SOA) from α-pinene ozonolysis. We studied three mobility-selected soot core sizes, each with a number of successively thicker coatings of SOA applied. Using IR laser vaporization, the SP-AMS had different changes in sensitivity to rBC compared to potassium as a function of applied SOA coatings. We show that this is due to different effective beam widths for the IR laser vaporization region of potassium versus black carbon. The SP-AMS's sensitivity to black carbon (BC) mass was not observed to plateau following successive SOA coatings, despite achieving high OA : BC mass ratios greater than 9. We also measured the ion fragmentation pattern of biomass-burning rBC and found it changed only slightly with increasing SOA mass. The average organic matter ion signal measured by the LAAPTOF demonstrated a positive correlation with the condensed SOA mass on individual particles, despite the inhomogeneity of the particle core compositions. This demonstrates that the LAAPTOF can obtain quantitative mass measurements of aged soot-particle composition from realistic biomass-burning particles with complex morphologies and composition.

  8. Effects of local meteorology and aerosols on ozone and nitrogen dioxide retrievals from OMI and pandora spectrometers in Maryland, USA during DISCOVER-AQ 2011.

    PubMed

    Reed, Andra J; Thompson, Anne M; Kollonige, Debra E; Martins, Douglas K; Tzortziou, Maria A; Herman, Jay R; Berkoff, Timothy A; Abuhassan, Nader K; Cede, Alexander

    An analysis is presented for both ground- and satellite-based retrievals of total column ozone and nitrogen dioxide levels from the Washington, D.C., and Baltimore, Maryland, metropolitan area during the NASA-sponsored July 2011 campaign of Deriving Information on Surface COnditions from Column and VERtically Resolved Observations Relevant to Air Quality (DISCOVER-AQ). Satellite retrievals of total column ozone and nitrogen dioxide from the Ozone Monitoring Instrument (OMI) on the Aura satellite are used, while Pandora spectrometers provide total column ozone and nitrogen dioxide amounts from the ground. We found that OMI and Pandora agree well (residuals within ±25 % for nitrogen dioxide, and ±4.5 % for ozone) for a majority of coincident observations during July 2011. Comparisons with surface nitrogen dioxide from a Teledyne API 200 EU NOx Analyzer showed nitrogen dioxide diurnal variability that was consistent with measurements by Pandora. However, the wide OMI field of view, clouds, and aerosols affected retrievals on certain days, resulting in differences between Pandora and OMI of up to ±65 % for total column nitrogen dioxide, and ±23 % for total column ozone. As expected, significant cloud cover (cloud fraction >0.2) was the most important parameter affecting comparisons of ozone retrievals; however, small, passing cumulus clouds that do not coincide with a high (>0.2) cloud fraction, or low aerosol layers which cause significant backscatter near the ground affected the comparisons of total column nitrogen dioxide retrievals. Our results will impact post-processing satellite retrieval algorithms and quality control procedures.

  9. Effect of secondary organic aerosol coating thickness on the real-time detection and characterization of biomass-burning soot by two particle mass spectrometers

    DOE PAGES

    Ahern, Adam T.; Subramanian, Ramachandran; Saliba, Georges; ...

    2016-12-22

    Biomass burning is a large source of light-absorbing refractory black carbon (rBC) particles with a wide range of morphologies and sizes. The net radiative forcing from these particles is strongly dependent on the amount and composition of non-light-absorbing material internally mixed with the rBC and on the morphology of the mixed particles. Understanding how the mixing state and morphology of biomass-burning aerosol evolves in the atmosphere is critical for constraining the influence of these particles on radiative forcing and climate. We investigated the response of two commercial laser-based particle mass spectrometers, the vacuum ultraviolet (VUV) ablation LAAPTOF and the IRmore » vaporization SP-AMS, to monodisperse biomass-burning particles as we sequentially coated the particles with secondary organic aerosol (SOA) from α-pinene ozonolysis. We studied three mobility-selected soot core sizes, each with a number of successively thicker coatings of SOA applied. Using IR laser vaporization, the SP-AMS had different changes in sensitivity to rBC compared to potassium as a function of applied SOA coatings. We show that this is due to different effective beam widths for the IR laser vaporization region of potassium versus black carbon. The SP-AMS's sensitivity to black carbon (BC) mass was not observed to plateau following successive SOA coatings, despite achieving high OA : BC mass ratios greater than 9. We also measured the ion fragmentation pattern of biomass-burning rBC and found it changed only slightly with increasing SOA mass. The average organic matter ion signal measured by the LAAPTOF demonstrated a positive correlation with the condensed SOA mass on individual particles, despite the inhomogeneity of the particle core compositions. This demonstrates that the LAAPTOF can obtain quantitative mass measurements of aged soot-particle composition from realistic biomass-burning particles with complex morphologies and composition.« less

  10. Biological Particle Emissions From a South-East Asian Tropical Rainforest Using a Real- Time Dual Channel UV Fluorescence Bio-Aerosol Spectrometer

    NASA Astrophysics Data System (ADS)

    Gabey, A.; Coe, H.; Gallagher, M.; McFiggans, G.; Kaye, P.; Stanley, W.; Foot, V.

    2008-12-01

    and net emission for all fungal spores is ~1 μ g m-3 and ~50 Tg yr-1. These calculations demonstrate the potential importance of PBA, and in particular fungal spores, for global budgets of organic aerosols, particularly in tropical regions, however uncertainties are extremely large, ranging from 50 - 1000 Tg yr- 1. In this study we use the WIBS-3: a low-cost portable single-particle dual-channel UV fluorescence spectrometer (Kaye et al., 2008) to investigate the dynamics of PBA in real-time within and above a tropical forest of 50 m height in Borneo, Malaysia, to estimate net PBA emissions. Different circadian cycles were observed for bio and non-bio aerosol sources and the factors controlling bioaerosol emissions will be discussed in detail.

  11. Chemical Characteristics of Particulate Matter from Vehicle emission using High Resolution Time of Flight Aerosol Mass Spectrometer (HR-ToF-AMS)

    NASA Astrophysics Data System (ADS)

    Park, T.; Lee, T.; Kang, S.; Lee, J.; Kim, J.; Son, J.; Yoo, H. M.; Kim, K.; Park, G.

    2015-12-01

    Car emissions are major contributors of particulate matter (PM) in the urban environment and effects of air pollution, climate change, and human activities. By increasing of interest in research of car emission for assessment of the PM control, it became require to understand the chemical composition and characteristics of the car exhaust gases and particulate matter. To understand car emission characteristics of PM, we will study PM of car emissions for five driving modes (National Institute Environmental Research (NIER)-5, NIER-9, NIER-12, NIER-14) and three fixed speed driving modes (30km/h, 70km/h, 110km/h) using different fuel types (gasoline, diesel, and LPG) at Transportation Pollution Research Center (TPRC) of NIER in Incheon, South Korea. PM chemical composition of car emission was measured for concentrations of organics, sulfate, nitrate, ammonium, PAHs, oxidation states and size distribution using an Aerodyne High Resolution Time-of-Flight Aerosol Mass Spectrometer (HR-ToF-AMS) and engine exhaust particle sizer (EEPS) on real-time. In the study, organics concentration was dominated for all cases of driving modes and the concentration of organics was increased in 110km/h fixed speed mode for gasoline and diesel. The presentation will provide an overview of the chemical composition of PM in the car emissions.

  12. [Characteristics and Formation Mechanism of a Multi-Day Haze in the Winter of Shijiazhuang Using a Single Particle Aerosol Mass Spectrometer (SPAMS)].

    PubMed

    Zhou, Jing-bo; Ren, Yi-bin; Hong, Gang; Lu, Na; Li, Zhi-guo; Li, Lei; Li, Hui-lai; Jin, Wei

    2015-11-01

    A multi-day haze episode occurred in Shijiazhuang during November 18-26, 2014. The characteristics were studied based on the data collected by the single particle aerosol mass spectrometer (SPAMS) located in the automatic monitoring station (20 meters) of Shijiazhuang. In accordance with the source spectral library of atmospheric pollutant emissions in Shijiazhuang, the main sources were distinguished and analyzed. The mass concentration of particulate matters and meteorological conditions being taken in account, the causes of haze in winter were also studied. It turned out that fine particulate matters in the Shijiazhuang air were mainly from 7 different sources: the tracer ion of coal source was Al; the tracer ions of industry sources were OC, Fe, and Pb; the tracer ion of motor vehicle tail gas source was EC; the tracer ions of dust source were Al, Ca and Si; the tracer ions of biomass burning source were K and levoglucosan; the tracer ions of pure secondary inorganic source were SO4-, NO2-, and NO3-, and the tracer ion of dining source was HOC. Of the above mentioned, OC, HOC, EC, HEC, ECOC, rich potassium particles minerals and heavy metals were 8 dominant polluting groups in hazy days. OC and ECOC particles were the majority, which accounted for more than 50% and 20% of the overall measured particles. OC particles were mainly discharged from coal combustion and industrial processes, and ECOC particles were mainly from coal combustion and vehicle exhaust emissions. When haze occurred in Shijiazhuang the proportion of pollutant particles of NH4+, SO4- , NO2- and NO3- increased, of which NH4+ was the most sharply increased. The mixed degree between EC, OC and NH4+, So4-, NO3- in the haze was higher than usual, of which NH4+ was the most sharply increased. In the static and stable weather gaseous (SO2, NO(x), NH3, VOCs) pollutants and particles were difficult to spread and accumulated rapidly, which were discharged from coal combustion, the process of the medical

  13. Peak-fitting and integration imprecision in the Aerodyne aerosol mass spectrometer: effects of mass accuracy on location-constrained fits

    NASA Astrophysics Data System (ADS)

    Corbin, J. C.; Othman, A.; Allan, J. D.; Worsnop, D. R.; Haskins, J. D.; Sierau, B.; Lohmann, U.; Mensah, A. A.

    2015-11-01

    The errors inherent in the fitting and integration of the pseudo-Gaussian ion peaks in Aerodyne high-resolution aerosol mass spectrometers (HR-AMSs) have not been previously addressed as a source of imprecision for these or similar instruments. This manuscript evaluates the significance of this imprecision and proposes a method for their estimation in routine data analysis. In the first part of this work, it is shown that peak-integration errors are expected to scale linearly with peak height for the constrained-peak-shape fits performed in the HR-AMS. An empirical analysis is undertaken to investigate the most complex source of peak-integration imprecision: the imprecision in fitted peak height, σh. It is shown that the major contributors to σh are the imprecision and bias inherent in the m/z calibration, both of which may arise due to statistical and physical non-idealities of the instrument. A quantitative estimation of these m/z-calibration imprecisions and biases show that they may vary from ion to ion, even for ions of similar m/z. In the second part of this work, the empirical analysis is used to constrain a Monte Carlo approach for the estimation of σh and thus the peak-integration imprecision. The estimated σh for selected well-separated peaks (for which m/z-calibration imprecision and bias could be quantitatively estimated) scaled linearly with peak height as expected (i.e. as n1). In combination with the imprecision in peak-width quantification (which may be easily and directly estimated during quantification), peak-fitting imprecisions therefore dominate counting imprecisions (which scale as n0.5) at high signals. The previous HR-AMS uncertainty model therefore underestimates the overall fitting imprecision even for well-resolved peaks. We illustrate the importance of this conclusion by performing positive matrix factorization on a synthetic HR-AMS data set both with and without its inclusion. In the third part of this work, the Monte Carlo approach

  14. Spectral characterisation of mineralogical components of dust, HULIS and winter time aerosol using multi-wavelength photoacoustic spectrometer. A laboratory and a field study

    NASA Astrophysics Data System (ADS)

    Ajtai, Tibor; Utry, Noémi; Filep, Ágnes; Tátrai, Dávid; Bozóki, Zoltán; Szabó, Gábor

    2013-04-01

    Aerosol can interact with solar radiation via scattering and absorption. The back scattering fraction of incoming solar irradiation has cooling effect, while the forward scattering redistributes electromagnetic energy into the atmosphere. The photon energy transformed into thermal energy via the light absorption, therefore the absorption process heating absorbing particles and also their surroundings While scattering can be measured fairly accurately, the assessment of the radiative effect of light absorption by aerosol can only be determined with limited accuracy, in part, because of the lack of reliable instrument for absorption measurement. The photoacoustic (PA) spectroscopy is the only method that can measure light absorption by aerosol in-situ (without sampling artifacts) with high sensitivity and temporal resolution, but not widespread in its application yet. Recently, multi-wavelength photoacoustic instruments including excitation at UVs have become available and open up a new perspective on in-situ investigation of light absorption by aerosol as well as its wavelength dependency. In this study we present novel results of an in-situ study of aerosol light absorption measurement of re-dispersed mineralogical composition of dust such as illit, caolinite, quartz, rutile, limestone, hematite and HULIS aerosols using state-of-the-art multi-wavelength photoacoustic instrument (4λ-PAS). We experimentally demonstrated that the absorption feature of MAC (mass specific aerosol absorption) could be used as chemically selective parameter. We also demonstrated the results of an in-situ winter time ambient aerosol measurement. The hourly concentration of trace elements(i.e. K, Ca, Fe, and Si), gaseous pollutants (CO and NOx), as well as the size distribution of ambient aerosol were also analyzed during the measurement campaign. The levoglucosan measurement was made to confirm that the daily fluctuation of ambient AAE (absorption Angstrom Exponent) governed by the

  15. Analysis of secondary organic aerosol using a Micro-Orifice Volatilization Impactor (MOVI) coupled to an ion trap mass spectrometer with atmospheric pressure chemical ionization (APCI-IT/MS)

    NASA Astrophysics Data System (ADS)

    Brueggemann, M.; Vogel, A.; Hoffmann, T.

    2012-04-01

    We describe the development and characterization of a Micro-Orifice Volatilization Impactor (MOVI) which is coupled to an ion trap mass spectrometer with atmospheric pressure chemical ionization (APCI-IT/MS), and its application in laboratory and field measurements. The MOVI-APCI-IT/MS allows the quantification of organic acids and other oxidation products of volatile organic compounds (VOCs) in secondary organic aerosols (SOA) on a semi-continuous basis. Furthermore, the vapor pressure and saturation concentration of the particle components can be estimated. The MOVI was first described in 2010 by Yatavelli and Thornton (Yatavelli and Thornton, 2010). It is a single stage, multi-nozzle impactor with 100 nozzles, each having a diameter of 150 μm. At a flow-rate of 10 L·min-1 air is drawn through the MOVI and particles are collected on a deposition plate. The cut-point diameter (d50, diameter of 50% collection efficiency) is at 130 nm. A low pressure-drop of only 5.3% of atmospheric pressure behind the nozzles allows collecting not only low-volatile but even semi-volatile compounds, which are an important part of SOA. After collecting particles hydrocarbon-free synthetic air is led over the collection surface into the APCI-IT/MS and the collection surface is heated up to 120 ° C in less than 200 s, volatilizing the sampled SOA. The vaporized compounds are transferred into the ion source and subsequently analyzed by mass spectrometry. Due to the soft ionization at atmospheric pressure the obtained mass spectra show only low fragmentations and can easily be interpreted. In laboratory experiments the MOVI-APCI-IT/MS was used for the chemical analysis of SOA generated from α-pinene-ozonolysis in a smog chamber. The limit of detection was found at 7.3 ng for pinic acid. The vapor pressure log p0 and the saturation concentration C25* for pinic acid were calculated from the desorption temperature using the method presented by Faulhaber et al. (Faulhaber et al., 2009

  16. Monolithic spectrometer

    DOEpatents

    Rajic, Slobodan; Egert, Charles M.; Kahl, William K.; Snyder, Jr., William B.; Evans, III, Boyd M.; Marlar, Troy A.; Cunningham, Joseph P.

    1998-01-01

    A monolithic spectrometer is disclosed for use in spectroscopy. The spectrometer is a single body of translucent material with positioned surfaces for the transmission, reflection and spectral analysis of light rays.

  17. Monolithic spectrometer

    DOEpatents

    Rajic, S.; Egert, C.M.; Kahl, W.K.; Snyder, W.B. Jr.; Evans, B.M. III; Marlar, T.A.; Cunningham, J.P.

    1998-05-19

    A monolithic spectrometer is disclosed for use in spectroscopy. The spectrometer is a single body of translucent material with positioned surfaces for the transmission, reflection and spectral analysis of light rays. 6 figs.

  18. Measuring the temporal evolution of aerosol composition in a remote marine environment influenced by Saharan dust outflow using a new single particle mass spectrometer.

    NASA Astrophysics Data System (ADS)

    Marsden, Nicholas; Williams, Paul; Flynn, Michael; Taylor, Jonathan; Liu, Dantong; Allan, James; Coe, Hugh

    2016-04-01

    Refractory material constitutes a significant fraction of the atmospheric aerosol burden and has a strong influence on climate through the direct radiative effect and aerosol-cloud interactions, particularly in cold and mixed phase clouds. Composition of refractory aerosols is traditionally measured using off-line analytical techniques such as filter analyses. However, when using off-line techniques the temporal evolution of the data set is lost, meaning the measurements are difficult to relate to atmospheric processes. Recently, single particle mass spectrometry (SPMS) has proven a useful tool for the on-line study of refractory aerosols with the ability to probe size resolved chemical composition with high temporal resolution on a particle by particle basis. A new Laser Ablation Aerosol Time-of-Flight (LAAP-TOF) SPMS instrument with a modified optical detection system was deployed for ground based measurements at Praia, Cape Verde during the Ice in Cloud - Dust (ICE-D) multi-platform campaign in August 2015. A primary aim of the project was to evaluate the impact of Saharan dust on ice nucleation in mixed phase clouds. The instrument was operated over a 16 day period in which several hundred thousand single particle mass spectra were obtained from air masses with back trajectories traversing the Mid-Atlantic, Sahara Desert and West Africa. The data presented indicate external mixtures of sea salt and silicate mineral dust internally mixed with secondary species that are consistent with long range transport to a remote marine environment. The composition and size distributions measured with the LAAP-TOF are compared with measurements from an aerodynamic particle sizer (APS), Single Particle Soot Photometer (SP2), and data from SEM-EDX analysis of filter samples. The particle number fraction identified as silicate mineral from the mass spectra correlates with a fraction of the incandescent particles measured with the SP2. We discuss the suitability of the modified

  19. CAS77 and CAS7276: A Review.

    ERIC Educational Resources Information Center

    Harrison, Isom, Jr.

    This paper describes the content, organization, specifications, and methods of use of the CAS77 and CAS7276 online files of worldwide chemical literature, databases produced by Chemical Abstracts Service and available from System Development Corporation (SDC). The scope of the databases, their unit record, their data elements, their modes of…

  20. Characterization of the organic matter in submicron urban aerosols using a Thermo-Desorption Proton-Transfer-Reaction Time-of-Flight Mass Spectrometer (TD-PTR-TOF-MS)

    NASA Astrophysics Data System (ADS)

    Salvador, Christian Mark; Ho, T.-T.; Chou, Charles C.-K.; Chen, M.-J.; Huang, W.-R.; Huang, S.-H.

    2016-09-01

    Organic matter is the most complicated and unresolved major component of atmospheric aerosol particles. Its sources and global budget are still highly uncertain and thereby necessitate further research efforts with state-of-the-art instrument. This study employed a Thermo-Desorption Proton-Transfer-Reaction Time-of-Flight Mass Spectrometer (TD-PTR-TOF-MS) for characterization of ambient organic aerosols. First, five authentic standard substances, which include phthalic acid, levoglucosan, arabitol, cis-pinonic acid and glutaric acid, were utilized to examine the response of the instrument. The results demonstrated the linearity of the TD-PTR-TOF-MS signals against a range of mass loading of specific species on filters. However, it was found that significant fragmentation happened to those challenging compounds, although the proton-transfer-reaction (PTR) was recognized as a soft ionization technique. Consequently, quantitative characterization of aerosols with the TD-PTR-TOF-MS depended on the availability of the fragmentation pattern in mass spectra and the recovery rate with the quantification ion peak(s). The instrument was further deployed to analyze a subset of submicron aerosol samples collected at the TARO (Taipei Aerosol and Radiation Observatory) in Taipei, Taiwan during August 2013. The results were compared with the measurements from a conventional DRI thermo-optical carbon analyzer. The inter-comparison indicated that the TD-PTR-TOF-MS underestimated the mass of total organic matter (TOM) in aerosol samples by 27%. The underestimation was most likely due to the thermo-decomposition during desorption processes and fragmentation in PTR drift tube, where undetectable fragments were formed. Besides, condensation loss of low vapor pressure species in the transfer components was also responsible for the underestimation to a certain degree. Nevertheless, it was showed that the sum of the mass concentrations of the major detected ion peaks correlated strongly

  1. On-Line Measurements of Beryllium, Chromium, and Mercury by Using Aerosol Beam Focused Laser-Induced Plasma Spectrometer and Time-Integrated Filter Sampling Reference Method

    SciTech Connect

    Cheng, M.D.

    2003-05-15

    A novel real-time monitor for aerosol particles has been developed by the Oak Ridge National Laboratory (ORNL). The instrument is designed to perform in-situ measurement for the elemental composition of aerosol particles in flue gas. We had tested this monitor at the Eastman Chemical Company in July 2001 taking advantage of the emissions from a waste incinerator operated by the company as the background. To investigate the behavior and response of the monitor under simulated/known conditions, stock solutions of prepared metal concentration(s) were nebulized to provide spikes for the instrument testing. Strengths of the solutions were designed such that a reference method (RM) was able to collect sufficient material on filter samples that were subsequently analyzed in a laboratory to produce 30-minute average data points. Parallel aerosol measurements were performed by using the ORNL instrument. Recorded signal of an individual element was processed and the concentration calculated from a calibration curve established prior to the campaign. RM data were able to reflect the loads simulated in the spiked waste stream. However, it missed one beryllium sample. The possibility of bias exists in the RM determination of chromium that could lead to erroneous comparison between the RM and the real-time monitoring data. With the real-time detection capability, the ORNL instrument was able to reveal the emission variation by making seven measurements within a 30-minute cycle. The ability of the instrument also enables the reconstruction of the baseline chromium emission concentration. The measurements for mercury by both methods are in good agreement.

  2. Airborne Aerosol In situ Measurements during TCAP: A Closure Study of Total Scattering

    SciTech Connect

    Kassianov, Evgueni I.; Berg, Larry K.; Pekour, Mikhail S.; Flynn, Connor J.; Tomlinson, Jason M.; Chand, Duli; Shilling, John E.; Ovchinnikov, Mikhail; Barnard, James C.; Sedlacek, Art; Schmid, Beat

    2015-07-31

    We present here a framework for calculating the total scattering of both non-absorbing and absorbing aerosol at ambient conditions from aircraft data. The synergistically employed aircraft data involve aerosol microphysical, chemical, and optical components and ambient relative humidity measurements. Our framework is developed emphasizing the explicit use of the complementary chemical composition data for estimating the complex refractive index (RI) of particles, and thus obtaining improved ambient size spectra derived from Optical Particle Counter (OPC) measurements. The feasibility of our framework for improved calculations of total aerosol scattering is demonstrated for different ambient conditions with a wide range of relative humidities (from 5 to 80%) using three types of data collected by the U.S. Department of Energy (DOE) G-1 aircraft during the recent Two-Column Aerosol Project (TCAP). Namely, these three types of data employed are: (1) size distributions measured by an Ultra High Sensitivity Aerosol Spectrometer (UHSAS; 0.06-1 µm), a Passive Cavity Aerosol Spectrometer (PCASP; 0.1-3 µm) and a Cloud and Aerosol Spectrometer (CAS; 0.6- >10 µm), (2) chemical composition data measured by an Aerosol Mass Spectrometer (AMS; 0.06-0.6 µm) and a Single Particle Soot Photometer (SP2; 0.06-0.6 µm), and (3) the dry total scattering coefficient measured by a TSI integrating nephelometer at three wavelengths (0.45, 0.55, 0.7 µm) and scattering enhancement factor measured with a humidification system at three RHs (near 45%, 65% and 90%) at a single wavelength (0.525 µm). We demonstrate that good agreement (~10% on average) between the observed and calculated scattering at these three wavelengths can be obtained using the best available chemical composition data for the RI-based correction of the OPC-derived size spectra. We also demonstrate that ignoring the RI-based correction and using non-representative RI values can cause a substantial underestimation (~40

  3. Multidimensional spectrometer

    DOEpatents

    Zanni, Martin Thomas; Damrauer, Niels H.

    2010-07-20

    A multidimensional spectrometer for the infrared, visible, and ultraviolet regions of the electromagnetic spectrum, and a method for making multidimensional spectroscopic measurements in the infrared, visible, and ultraviolet regions of the electromagnetic spectrum. The multidimensional spectrometer facilitates measurements of inter- and intra-molecular interactions.

  4. Laboratory and Field Characterizations of a Filter Inlet for Gases and AEROsols (FIGAERO) Collector Module for a Chemical Ionization Time-of-Flight Mass Spectrometer (CI-TOFMS) Instrument

    NASA Astrophysics Data System (ADS)

    Nowak, J. B.; Vogel, A.; Massoli, P.; Lambe, A. T.; Stark, H.; Kimmel, J.; Isaacman-VanWertz, G. A.; Kroll, J. H.; Canagaratna, M. R.; Worsnop, D. R.; Jayne, J. T.

    2015-12-01

    The Aerodyne Research, Inc. (ARI) Filter Inlet for Gases and AEROsols (FIGAERO) collector module is an add-on for Chemical Ionization Time-of-Flight Mass Spectrometer (CI-TOFMS) instruments. The FIGAERO enables simultaneous real-time chemical analysis of trace gases and particles in ambient air. The collector module described here is modelled after the University of Washington (UW) design of Lopez-Hilfikeret al., 2014. The collector module mounts directly to the front of the CI-TOFMS ion molecule reactor, replacing the standard gas phase inlet. Automated operation follows a two-step sequence alternating between gas and particle sampling. Gas and particle flows are sampled through separate inlet lines. Software provides automated control of the ARI FIGAERO and determines which inlet line is sampled into ion molecule reaction region. While in the gas phase measuring position particles are separately collected on a filter. After sufficient particle collection, heated clean nitrogen is passed over the filter to desorb the particles on the filter. The thermally desorbed material is then measured with the CI-TOFMS. Though conceptually similar, the ARI FIGAERO is mechanically different enough from the UW design that it requires its own performance assessment. Presented here is the characterization of the ARI FIGAERO collector module. The FIGAERO performance is assessed by using laboratory, chamber, and field data collected using iodide as the reagent ion to examine detection sensitivity, quantification limits, and time response. Lopez-Hilfiker et al., "A novel method for online analysis of gas and particle composition: description and evaluation of a Filter Inlet for Gases and AEROsols (FIGAERO)", Atmos. Meas. Tech., 7, 983-1001 (2014)

  5. Identification of oxidized organic atmospheric species during the Southern Oxidant and Aerosol Study (SOAS) using a novel Ion Mobility Time-of-Flight Chemical Ionization Mass Spectrometer (IMS-ToF-CIMS)

    NASA Astrophysics Data System (ADS)

    Krechmer, J.; Canagaratna, M.; Kimmel, J.; Junninen, H.; Knochenmuss, R.; Cubison, M.; Massoli, P.; Stark, H.; Jayne, J. T.; Surratt, J. D.; Jimenez, J. L.; Worsnop, D. R.

    2013-12-01

    We present results from the field deployment of a novel Ion Mobility Time-of-flight Chemical Ionization Mass Spectrometer (CI-IMS-TOF) during the Southern Oxidant and Aerosol Study (SOAS). IMS-TOF is a 2-dimensional analysis method, which separates gas-phase ions by mobility prior to determination of mass-to-charge ratio by mass spectrometry. Ion mobility is a unique physical property that is determined by the collisional cross section of an ion. Because mobility depends on size and shape, the IMS measurement is able to resolve isomers and isobaric compounds. Additionally, trends in IMS-TOF data space can be used to identify relationships between ions, such as common functionality or polymeric series. During SOAS we interfaced the IMS-TOF to a nitrate ion (NO3-) chemical ionization source that enables the selective ionization of highly oxidized gas phase species (those having a high O:C ratio) through clustering with the reagent ion. Highly oxidized products of terpenes and isoprene are important secondary organic aerosol precursors (SOA) that play an uncertain but important role in particle-phase chemistry. We present several case studies of atmospheric events during SOAS that exhibited elevated concentrations of sulfuric acid and/or organics. These events exhibited a rise in particle number and provide an opportunity to examine the role that organic species may have in local atmospheric new particle formation events. We also present the results from the field deployment and subsequent laboratory studies utilizing a Potential Aerosol Mass (PAM) flow reactor as the inlet for the CI-IMS-TOF. The reactor draws in ambient air and exposes it to high concentrations of the OH radical, created by photolysis O3 in the presence of water. The highly oxidized products are then sampled directly by the CI-IMS-TOF. We performed several experiments including placing pine and deciduous plants directly in front of the reactor opening and observed large increases in the number and

  6. Investigation of the spectral responses of laser generated aerosol from household coals using a state-of-the-art multi-wavelength photoacoustic spectrometer

    NASA Astrophysics Data System (ADS)

    Ajtai, Tibor; Utry, Noemi; Pinter, Mate; Kiss-Albert, Gergely; Smausz, Tomi; Konya, Zoltan; Hopp, Bela; Szabo, Gabor; Bozoki, Zoltan

    2016-04-01

    We present the investigation of the inherent, spectral features of laser generated and chemically characterized residential coal aerosols generated in our recently introduced laser ablation based LAC generator. The optical absorption and the scattering features of the generated aerosol were investigated by our state-of-the-art multi wavelength PAS instrument (4λ-PAS) and a multi wavelength cosinus sensor (Aurora 3000). The quantified wavelength dependency (AAE and SAE) are deduced from the measured data. Finally, relationship between the optical and the thermochemical characteristics is revealed. Atmospheric light absorbing carbonaceous particulate matter (LAC) is in the middle of scientific interest especially because of its climatic and adverse health relevance. The latest scientific assessments identified atmospheric soot as the second most important anthropogenic emission regarding its climatic effect and as one of the most harmful atmospheric constituents based on its health aspects. LAC dominantly originates from anthropogenic sources, so its real time and selective identification is also essential for the means of its legal regulation. Despite of its significance the inherent properties of LAC are rarely described and the available data is widely spread even in the case of the most intensively studied black or elementary carbon. Therefore, the investigation of the inherent climate and health relevant properties of atmospheric soot is a highly actual issue. Moreover investigation of the optical and toxic properties of LAC originating from the combustion of household coals is almost completely missing from literature. There are two major reasons for that. Firstly, the characteristic parameters of soot are complex and vary in a wide range and depend not only on the initial burning conditions and the type of fuels but also the ambient factors. The other is the lack of a soot standard material and a generator which are suitable for modelling the real atmospheric

  7. SCINTILLATION SPECTROMETER

    DOEpatents

    Bell, P.R.; Francis, J.E.

    1960-06-21

    A portable scintillation spectrometer is described which is especially useful in radio-biological studies for determining the uptake and distribution of gamma -emitting substances in tissue. The spectrometer includes a collimator having a plurality of apertures that are hexagonal in cross section. Two crystals are provided: one is activated to respond to incident rays from the collimator; the other is not activated and shields the first from external radiation.

  8. [CAS General Standards 2012

    ERIC Educational Resources Information Center

    Council for the Advancement of Standards in Higher Education, 2011

    2011-01-01

    The mission of the Council for the Advancement of Standards in Higher Education (CAS) is to promote the improvement of programs and services to enhance the quality of student learning and development. CAS is a consortium of professional associations who work collaboratively to develop and promulgate standards and guidelines and to encourage…

  9. Cas1-Cas2 complex formation mediates spacer acquisition during CRISPR-Cas adaptive immunity.

    PubMed

    Nuñez, James K; Kranzusch, Philip J; Noeske, Jonas; Wright, Addison V; Davies, Christopher W; Doudna, Jennifer A

    2014-06-01

    The initial stage of CRISPR-Cas immunity involves the integration of foreign DNA spacer segments into the host genomic CRISPR locus. The nucleases Cas1 and Cas2 are the only proteins conserved among all CRISPR-Cas systems, yet the molecular functions of these proteins during immunity are unknown. Here we show that Cas1 and Cas2 from Escherichia coli form a stable complex that is essential for spacer acquisition and determine the 2.3-Å-resolution crystal structure of the Cas1-Cas2 complex. Mutations that perturb Cas1-Cas2 complex formation disrupt CRISPR DNA recognition and spacer acquisition in vivo. Active site mutants of Cas2, unlike those of Cas1, can still acquire new spacers, thus indicating a nonenzymatic role of Cas2 during immunity. These results reveal the universal roles of Cas1 and Cas2 and suggest a mechanism by which Cas1-Cas2 complexes specify sites of CRISPR spacer integration.

  10. VUV state-selected photoionization of thermally-desorbed biomolecules by coupling an aerosol source to an imaging photoelectron/photoion coincidence spectrometer: case of the amino acids tryptophan and phenylalanine.

    PubMed

    Gaie-Levrel, François; Garcia, Gustavo A; Schwell, Martin; Nahon, Laurent

    2011-04-21

    Gas phase studies of biological molecules provide structural and dynamical information on isolated systems. The lack of inter- or intra-molecular interactions facilitates the interpretation of the experimental results through theoretical calculations, and constitutes an informative complement to the condensed phase. However advances in the field are partially hindered by the difficulty of vaporising these systems, most of which are thermally unstable. In this work we present a newly developed aerosol mass thermodesorption setup, which has been coupled to a Velocity Map Imaging (VMI) analyzer operated in coincidence with a Wiley-McLaren Time of Flight spectrometer, using synchrotron radiation as a single photon ionization source. Although it has been previously demonstrated that thermolabile molecules such as amino acids can be produced intact by the aerosol vaporisation technique, we show how its non-trivial coupling to a VMI analyzer plus the use of electron/ion coincidences greatly improves the concept in terms of the amount of spectroscopic and dynamic information that can be extracted. In this manner, we report on the valence shell ionization of two amino acids, tryptophan and phenylalanine, for which threshold photoelectron spectra have been recorded within the first 3 eV above the first ionization energy using synchrotron radiation emitted from the DESIRS beamline located at SOLEIL in France. Their adiabatic ionization energies (IEs) have been measured at 7.40 ± 0.05 and 8.65 ± 0.02 eV, respectively, and their spectra analyzed using existing theoretical data from the literature. The IE values agree well with previously published ones, but are given here with a considerably reduced uncertainty by up to a factor of 5. The photostability of both amino acids is also described in detail, through the measurement of the state-selected fragmentation pathways via the use of threshold electron/ion coincidences (TPEPICO), with appearance energies for the different

  11. Spectrometer gun

    DOEpatents

    Waechter, David A.; Wolf, Michael A.; Umbarger, C. John

    1985-01-01

    A hand-holdable, battery-operated, microprocessor-based spectrometer gun includes a low-power matrix display and sufficient memory to permit both real-time observation and extended analysis of detected radiation pulses. Universality of the incorporated signal processing circuitry permits operation with various detectors having differing pulse detection and sensitivity parameters.

  12. Spectrometer gun

    DOEpatents

    Waechter, D.A.; Wolf, M.A.; Umbarger, C.J.

    1981-11-03

    A hand-holdable, battery-operated, microprocessor-based spectrometer gun is described that includes a low-power matrix display and sufficient memory to permit both real-time observation and extended analysis of detected radiation pulses. Universality of the incorporated signal processing circuitry permits operation with various detectors having differing pulse detection and sensitivity parameters.

  13. HISS spectrometer

    SciTech Connect

    Greiner, D.E.

    1984-11-01

    This talk describes the Heavy Ion Spectrometer System (HISS) facility at the Lawrence Berkeley Laboratory's Bevalac. Three completed experiments and their results are illustrated. The second half of the talk is a detailed discussion of the response of drift chambers to heavy ions. The limitations of trajectory measurement over a large range in incident particle charge are presented.

  14. Mass Spectrometer for Airborne Micro-Organisms

    NASA Technical Reports Server (NTRS)

    Sinha, M. P.; Friedlander, S. K.

    1986-01-01

    Bacteria and other micro-organisms identified continously with aid of new technique for producing samples for mass spectrometer. Technique generates aerosol of organisms and feeds to spectrometer. Given species of organism produces characteristic set of peaks in mass spectrum and thereby identified. Technique useful for monitoring bacterial makeup in environmental studies and in places where cleanliness is essential, such as hospital operating rooms, breweries, and pharmaceutical plants.

  15. The Spectrometer

    NASA Astrophysics Data System (ADS)

    Greenslade, Thomas B.

    2012-03-01

    In the fall of 1999 I was shown an Ocean Optics spectrometer-in-the-computer at St. Patricks College at Maynooth, Ireland, and thought that I had seen heaven. Of course, it could not resolve the sodium D-lines (I had done that many years before with a homemade wire diffraction grating ), and I began to realize that inside was some familiar old technology. In this paper I would like to discuss its ancestors.

  16. The Spectrometer

    ERIC Educational Resources Information Center

    Greenslade, Thomas B., Jr.

    2012-01-01

    In the fall of 1999 I was shown an Ocean Optics spectrometer-in-the-computer at St. Patricks College at Maynooth, Ireland, and thought that I had seen heaven. Of course, it could not resolve the sodium D-lines (I had done that many years before with a homemade wire diffraction grating), and I began to realize that inside was some familiar old…

  17. Sugars in Antarctic aerosol

    NASA Astrophysics Data System (ADS)

    Barbaro, Elena; Kirchgeorg, Torben; Zangrando, Roberta; Vecchiato, Marco; Piazza, Rossano; Barbante, Carlo; Gambaro, Andrea

    2015-10-01

    The processes and transformations occurring in the Antarctic aerosol during atmospheric transport were described using selected sugars as source tracers. Monosaccharides (arabinose, fructose, galactose, glucose, mannose, ribose, xylose), disaccharides (sucrose, lactose, maltose, lactulose), alcohol-sugars (erythritol, mannitol, ribitol, sorbitol, xylitol, maltitol, galactitol) and anhydrosugars (levoglucosan, mannosan and galactosan) were measured in the Antarctic aerosol collected during four different sampling campaigns. For quantification, a sensitive high-pressure anion exchange chromatography was coupled with a single quadrupole mass spectrometer. The method was validated, showing good accuracy and low method quantification limits. This study describes the first determination of sugars in the Antarctic aerosol. The total mean concentration of sugars in the aerosol collected at the "Mario Zucchelli" coastal station was 140 pg m-3; as for the aerosol collected over the Antarctic plateau during two consecutive sampling campaigns, the concentration amounted to 440 and 438 pg m-3. The study of particle-size distribution allowed us to identify the natural emission from spores or from sea-spray as the main sources of sugars in the coastal area. The enrichment of sugars in the fine fraction of the aerosol collected on the Antarctic plateau is due to the degradation of particles during long-range atmospheric transport. The composition of sugars in the coarse fraction was also investigated in the aerosol collected during the oceanographic cruise.

  18. MASS SPECTROMETER

    DOEpatents

    White, F.A.

    1960-08-23

    A mass spectrometer is designed with a first adjustable magnetic field for resolving an ion beam into beams of selected masses, a second adjustable magnetic field for further resolving the ion beam from the first field into beams of selected masses, a thin foil disposed in the path of the beam between the first and second magnets to dissociate molecular ions incident thereon, an electrostatic field for further resolving the ion beam from the second field into beams of selected masses, and a detector disposed adjacent to the electrostatic field to receive the ion beam.

  19. Cas9 Functionally Opens Chromatin

    PubMed Central

    Barkal, Amira A.; Srinivasan, Sharanya; Hashimoto, Tatsunori; Gifford, David K.; Sherwood, Richard I.

    2016-01-01

    Using a nuclease-dead Cas9 mutant, we show that Cas9 reproducibly induces chromatin accessibility at previously inaccessible genomic loci. Cas9 chromatin opening is sufficient to enable adjacent binding and transcriptional activation by the settler transcription factor retinoic acid receptor at previously unbound motifs. Thus, we demonstrate a new use for Cas9 in increasing surrounding chromatin accessibility to alter local transcription factor binding. PMID:27031353

  20. Measuring Sodium Chloride Contents of Aerosols

    NASA Technical Reports Server (NTRS)

    Sinha, M. P.; Friedlander, S. K.

    1986-01-01

    Amount of sodium chloride in individual aerosol particles measured in real time by analyzer that includes mass spectrometer. Analyzer used to determine mass distributions of active agents in therapeutic or diagnostic aerosols derived from saline solutions and in analyzing ocean spray. Aerosol particles composed of sodium chloride introduced into oven, where individually vaporized on hot wall. Vapor molecules thermally dissociated, and some of resulting sodium atoms ionized on wall. Ions leave oven in burst and analyzed by spectrometer, which is set to monitor sodium-ion intensity.

  1. Systematic aerosol characterization by combining GOME-2 UV Aerosol Indices with trace gas concentrations

    NASA Astrophysics Data System (ADS)

    Penning de Vries, M.; Stammes, P.; Wagner, T.

    2012-04-01

    The task of determining aerosol type using passive remote sensing instruments is a daunting one. First, because the variety in aerosol (optical) properties is very large; and second, because the effect of aerosols on the detected top-of-atmosphere reflectance spectrum is smooth and mostly featureless. In addition, spectrometers like GOME-2 have a coarse spatial resolution, which makes aerosol characterization even more difficult due to interferences with clouds. On account of these problems, we do not attempt to derive aerosol properties from single measurements: instead, we combine time series of UV Aerosol Index and trace gas concentrations to derive the dominating aerosol type for each season. Aside from the Index values and trace gas concentrations themselves, the correlation between UV Aerosol Indices (which are indicative of aerosol absorption) with NO2, HCHO, and CHOCHO columns - or absence of it - provides clues to the (main) source of the aerosols in the investigated region and time range. For example: a high correlation of HCHO and Absorbing Aerosol Index points to aerosols from biomass burning, highly correlated CHOCHO, HCHO, and SCattering Index indicate biogenic secondary organic aerosols, and coinciding high NO2 concentrations with high SCattering Index values are associated with industrial and urban aerosols. We here present case studies for several regions to demonstrate the suitability of our approach. Then, we introduce a method to systematically derive the dominating aerosol type on a global scale on time scales varying from monthly to yearly.

  2. TSI Model 3936 Scanning Mobility Particle Spectrometer Instrument Handbook

    SciTech Connect

    Kuang, C.

    2016-02-01

    The Model 3936 Scanning Mobility Particle Spectrometer (SMPS) measures the size distribution of aerosols ranging from 10 nm up to 1000 nm. The SMPS uses a bipolar aerosol charger to keep particles within a known charge distribution. Charged particles are classified according to their electrical mobility, using a long-column differential mobility analyzer (DMA). Particle concentration is measured with a condensation particle counter (CPC). The SMPS is well-suited for applications including: nanoparticle research, atmospheric aerosol studies, pollution studies, smog chamber evaluations, engine exhaust and combustion studies, materials synthesis, filter efficiency testing, nucleation/condensation studies, and rapidly changing aerosol systems.

  3. Aerosol in the Pacific troposphere

    NASA Technical Reports Server (NTRS)

    Clarke, Antony D.

    1989-01-01

    The use of near real-time optical techniques is emphasized for the measurement of mid-tropospheric aerosol over the Central Pacific. The primary focus is on measurement of the aerosol size distribution over the range of particle diameters from 0.15 to 5.0 microns that are essential for modeling CO2 backscatter values in support of the laser atmospheric wind sounder (LAWS) program. The measurement system employs a LAS-X (Laser Aerosol Spectrometer-PMS, Boulder, CO) with a custom 256 channel pulse height analyzer and software for detailed measurement and analysis of aerosol size distributions. A thermal preheater system (Thermo Optic Aerosol Descriminator (TOAD) conditions the aerosol in a manner that allows the discrimination of the size distribution of individual aerosol components such as sulfuric acid, sulfates and refractory species. This allows assessment of the relative contribution of each component to the BCO2 signal. This is necessary since the different components have different sources, exhibit independent variability and provide different BCO2 signals for a given mass and particle size. Field activities involve experiments designed to examine both temporal and spatial variability of these aerosol components from ground based and aircraft platforms.

  4. Aerosol Climate Time Series Evaluation In ESA Aerosol_cci

    NASA Astrophysics Data System (ADS)

    Popp, T.; de Leeuw, G.; Pinnock, S.

    2015-12-01

    Within the ESA Climate Change Initiative (CCI) Aerosol_cci (2010 - 2017) conducts intensive work to improve algorithms for the retrieval of aerosol information from European sensors. By the end of 2015 full mission time series of 2 GCOS-required aerosol parameters are completely validated and released: Aerosol Optical Depth (AOD) from dual view ATSR-2 / AATSR radiometers (3 algorithms, 1995 - 2012), and stratospheric extinction profiles from star occultation GOMOS spectrometer (2002 - 2012). Additionally, a 35-year multi-sensor time series of the qualitative Absorbing Aerosol Index (AAI) together with sensitivity information and an AAI model simulator is available. Complementary aerosol properties requested by GCOS are in a "round robin" phase, where various algorithms are inter-compared: fine mode AOD, mineral dust AOD (from the thermal IASI spectrometer), absorption information and aerosol layer height. As a quasi-reference for validation in few selected regions with sparse ground-based observations the multi-pixel GRASP algorithm for the POLDER instrument is used. Validation of first dataset versions (vs. AERONET, MAN) and inter-comparison to other satellite datasets (MODIS, MISR, SeaWIFS) proved the high quality of the available datasets comparable to other satellite retrievals and revealed needs for algorithm improvement (for example for higher AOD values) which were taken into account for a reprocessing. The datasets contain pixel level uncertainty estimates which are also validated. The paper will summarize and discuss the results of major reprocessing and validation conducted in 2015. The focus will be on the ATSR, GOMOS and IASI datasets. Pixel level uncertainties validation will be summarized and discussed including unknown components and their potential usefulness and limitations. Opportunities for time series extension with successor instruments of the Sentinel family will be described and the complementarity of the different satellite aerosol products

  5. Organic aerosols

    SciTech Connect

    Penner, J.E.

    1994-01-01

    Organic aerosols scatter solar radiation. They may also either enhance or decrease concentrations of cloud condensation nuclei. This paper summarizes observed concentrations of aerosols in remote continental and marine locations and provides estimates for the sources of organic aerosol matter. The anthropogenic sources of organic aerosols may be as large as the anthropogenic sources of sulfate aerosols, implying a similar magnitude of direct forcing of climate. The source estimates are highly uncertain and subject to revision in the future. A slow secondary source of organic aerosols of unknown origin may contribute to the observed oceanic concentrations. The role of organic aerosols acting as cloud condensation nuclei (CCN) is described and it is concluded that they may either enhance or decrease the ability of anthropogenic sulfate aerosols to act as CCN.

  6. Tropospheric Emission Spectrometer and Airborne Emission Spectrometer

    NASA Technical Reports Server (NTRS)

    Glavich, T.; Beer, R.

    1996-01-01

    The Tropospheric Emission Spectrometer (TES) is an instrument being developed for the NASA Earth Observing System Chemistry Platform. TES will measure the distribution of ozone and its precursors in the lower atmosphere. The Airborne Emission Spectrometer (AES) is an aircraft precursor to TES. Applicable descriptions are given of instrument design, technology challenges, implementation and operations for both.

  7. A velocity map imaging photoelectron spectrometer for the study of ultrafine aerosols with a table-top VUV laser and Na-doping for particle sizing applied to dimethyl ether condensation.

    PubMed

    Yoder, Bruce L; West, Adam H C; Schläppi, Bernhard; Chasovskikh, Egor; Signorell, Ruth

    2013-01-28

    We present a new experimental configuration for the study of size-dependent, angle-resolved photoelectron and photoion spectra of weakly bound ultrafine aerosol particles targeted at particle sizes below ~20 nm. It combines single photon ionization by a tunable, table-top vacuum ultraviolet laser at energies up to 18 eV with velocity map imaging detection and independent size determination of the aerosol particles using the Na-doping method. As an example, the size-dependence of the valence photoelectron spectrum of dimethyl ether clusters and ultrafine aerosols is investigated. Up to a mean particle diameter of ~3-4 nm, the first ionization energy (value at band maximum) decreases systematically (up to ~1 eV) and the corresponding band broadens systematically (up to a factor of ~3) with increasing aggregate size. Plateau values for band positions and bandwidths are reached beyond a diameter of ~3-4 nm. Experimental evidence for the dominance of the fast intermolecular proton transfer over monomer fragmentation reactions upon ionization is presented via photoion imaging.

  8. Compact Infrared Spectrometers

    NASA Technical Reports Server (NTRS)

    Mouroulis, Pantazis

    2009-01-01

    Concentric spectrometer forms are advantageous for constructing a variety of systems spanning the entire visible to infrared range. Spectrometer examples are given, including broadband or high resolution forms. Some issues associated with the Dyson catadioptric type are also discussed.

  9. Dual nuclease activity of a Cas2 protein in CRISPR-Cas subtype I-B of Leptospira interrogans.

    PubMed

    Dixit, Bhuvan; Ghosh, Karukriti Kaushik; Fernandes, Gary; Kumar, Pankaj; Gogoi, Prerana; Kumar, Manish

    2016-04-01

    Leptospira interrogans serovar Copenhageni strain Fiocruz L1-130 carries a set of cas genes associated with CRISPR-Cas subtype I-B. Herein, we report for the first time active transcription of a set of cas genes (cas1 to cas8) of L. interrogans where cas4, cas1, cas2 and cas6, cas3, cas8, cas7, cas5 are clustered together in two independent operons. As an initial step toward comprehensive understanding of CRISPR-Cas system in spirochete, the biochemical study of one of the core Leptospira Cas2 proteins (Lep_Cas2) showed nuclease activity on both DNA and RNA in a nonspecific manner. Additionally, unlike other known Cas2 proteins, Lep_Cas2 showed metal-independent RNase activity and preferential activity on RNA over DNA. These results provide insight for understanding Cas2 diversity existing in the prokaryotic adaptive immune system.

  10. Near real time vapor detection and enhancement using aerosol adsorption

    DOEpatents

    Novick, Vincent J.; Johnson, Stanley A.

    1999-01-01

    A vapor sample detection method where the vapor sample contains vapor and ambient air and surrounding natural background particles. The vapor sample detection method includes the steps of generating a supply of aerosol that have a particular effective median particle size, mixing the aerosol with the vapor sample forming aerosol and adsorbed vapor suspended in an air stream, impacting the suspended aerosol and adsorbed vapor upon a reflecting element, alternatively directing infrared light to the impacted aerosol and adsorbed vapor, detecting and analyzing the alternatively directed infrared light in essentially real time using a spectrometer and a microcomputer and identifying the vapor sample.

  11. Near real time vapor detection and enhancement using aerosol adsorption

    DOEpatents

    Novick, V.J.; Johnson, S.A.

    1999-08-03

    A vapor sample detection method is described where the vapor sample contains vapor and ambient air and surrounding natural background particles. The vapor sample detection method includes the steps of generating a supply of aerosol that have a particular effective median particle size, mixing the aerosol with the vapor sample forming aerosol and adsorbed vapor suspended in an air stream, impacting the suspended aerosol and adsorbed vapor upon a reflecting element, alternatively directing infrared light to the impacted aerosol and adsorbed vapor, detecting and analyzing the alternatively directed infrared light in essentially real time using a spectrometer and a microcomputer and identifying the vapor sample. 13 figs.

  12. Improved Cloud Condensation Nucleus Spectrometer

    NASA Technical Reports Server (NTRS)

    Leu, Ming-Taun

    2010-01-01

    An improved thermal-gradient cloud condensation nucleus spectrometer (CCNS) has been designed to provide several enhancements over prior thermal- gradient counters, including fast response and high-sensitivity detection covering a wide range of supersaturations. CCNSs are used in laboratory research on the relationships among aerosols, supersaturation of air, and the formation of clouds. The operational characteristics of prior counters are such that it takes long times to determine aerosol critical supersaturations. Hence, there is a need for a CCNS capable of rapid scanning through a wide range of supersaturations. The present improved CCNS satisfies this need. The improved thermal-gradient CCNS (see Figure 1) incorporates the following notable features: a) The main chamber is bounded on the top and bottom by parallel thick copper plates, which are joined by a thermally conductive vertical wall on one side and a thermally nonconductive wall on the opposite side. b) To establish a temperature gradient needed to establish a supersaturation gradient, water at two different regulated temperatures is pumped through tubes along the edges of the copper plates at the thermally-nonconductive-wall side. Figure 2 presents an example of temperature and supersaturation gradients for one combination of regulated temperatures at the thermally-nonconductive-wall edges of the copper plates. c) To enable measurement of the temperature gradient, ten thermocouples are cemented to the external surfaces of the copper plates (five on the top plate and five on the bottom plate), spaced at equal intervals along the width axis of the main chamber near the outlet end. d) Pieces of filter paper or cotton felt are cemented onto the interior surfaces of the copper plates and, prior to each experimental run, are saturated with water to establish a supersaturation field inside the main chamber. e) A flow of monodisperse aerosol and a dilution flow of humid air are introduced into the main

  13. Toward Creating A Global Retrospective Climatology of Aerosol Properties

    NASA Technical Reports Server (NTRS)

    Curran, Robert J.; Mishchenko, Michael I.; Hansen, James E. (Technical Monitor)

    2000-01-01

    Tropospheric aerosols are thought to cause a significant direct and indirect climate forcing, but the magnitude of this forcing remains highly uncertain because of poor knowledge of global aerosol characteristics and their temporal changes. The standard long-term global product, the one-channel Advanced Very-High-Resolution Radiometer (AVHRR) aerosol optical thickness over the ocean, relies on a single predefined aerosol model and can be inaccurate in many cases. Furthermore, it provides no information on aerosol column number density, thus making it impossible to estimate the indirect aerosol effect on climate. Total Ozone Mapping Spectrometer (TOMS) data can be used to detect absorbing aerosols over land, but are insensitive to aerosols located below one kilometer. It is thus clear that innovative approaches must be employed in order to extract a more quantitative and accurate aerosol climatology from available satellite and other measurements, thus enabling more reliable estimates of the direct and indirect aerosol forcings. The Global Aerosol Climatology Project (GACP) was established in 1998 as part of the Global Energy and Water Cycle Experiment (GEWEX). Its main objective is to analyze satellite radiance measurements and field observations to infer the global distribution of aerosols, their properties, and their seasonal and interannual variations. The overall goal is to develop advanced global aerosol climatologies for the period of satellite data and to make the aerosol climatologies broadly available through the GACP web site.

  14. Spherical grating spectrometers

    NASA Astrophysics Data System (ADS)

    O'Donoghue, Darragh; Clemens, J. Christopher

    2014-07-01

    We describe designs for spectrometers employing convex dispersers. The Offner spectrometer was the first such instrument; it has almost exclusively been employed on satellite platforms, and has had little impact on ground-based instruments. We have learned how to fabricate curved Volume Phase Holographic (VPH) gratings and, in contrast to the planar gratings of traditional spectrometers, describe how such devices can be used in optical/infrared spectrometers designed specifically for curved diffraction gratings. Volume Phase Holographic gratings are highly efficient compared to conventional surface relief gratings; they have become the disperser of choice in optical / NIR spectrometers. The advantage of spectrometers with curved VPH dispersers is the very small number of optical elements used (the simplest comprising a grating and a spherical mirror), as well as illumination of mirrors off axis, resulting in greater efficiency and reduction in size. We describe a "Half Offner" spectrometer, an even simpler version of the Offner spectrometer. We present an entirely novel design, the Spherical Transmission Grating Spectrometer (STGS), and discuss exemplary applications, including a design for a double-beam spectrometer without any requirement for a dichroic. This paradigm change in spectrometer design offers an alternative to all-refractive astronomical spectrometer designs, using expensive, fragile lens elements fabricated from CaF2 or even more exotic materials. The unobscured mirror layout avoids a major drawback of the previous generation of catadioptric spectrometer designs. We describe laboratory measurements of the efficiency and image quality of a curved VPH grating in a STGS design, demonstrating, simultaneously, efficiency comparable to planar VPH gratings along with good image quality. The stage is now set for construction of a prototype instrument with impressive performance.

  15. The radii of SU Cas and TU Cas

    NASA Technical Reports Server (NTRS)

    Niva, G. D.; Schmidt, E. G.

    1980-01-01

    It is possible to obtain the masses of Cepheid variables by several methods involving the pulsation theory. However, these masses are frequently smaller than those indicated by the theory of stellar evolution. The cause of this discrepancy is not fully understood. Since the pulsation theory indicates that there is a relation among the mass, the radius and the period, the discrepancy also manifests itself in the radii of these stars. With this in mind, radius determinations for two Cepheids, SU Cas and TU Cas, were undertaken. It is concluded that because of the agreement between the present radius and the beat radius of TU Cas, the pulsation theory is giving correct information about the radii of beat Cepheids. This implies that the luminosities of short period Cepheids have been overestimated. Thus, the solution to the mass discrepancy should perhaps be sought in the theory of stellar evolution or in the possibility of mass loss.

  16. Aerosol volatility in a boreal forest environment

    NASA Astrophysics Data System (ADS)

    Häkkinen, S. A. K.; ńijälä, M.; Lehtipalo, K.; Junninen, H.; Virkkula, A.; Worsnop, D. R.; Kulmala, M.; Petäjä, T.; Riipinen, I.

    2012-04-01

    Climate and health effects of atmospheric aerosols are determined by their properties such as their chemical composition. Aerosol chemical composition can be studied indirectly by measuring volatility of aerosol particles. The volatility of submicron aerosol particles (20-500 nm) was studied in a boreal forest site at SMEAR II (Station for Measuring Ecosystem-Atmosphere Relations II) station (Vesala et al., 1998) in Hyytiälä, Finland, during 01/2008-05/2010. The instrument used for the measurements was VDMPS (Volatility Differential Mobility Particle Sizer), which consists of two separate instruments: DMPS (Differential Mobility Particle Sizer, Aalto et al., 2001) and TD (Thermodenuder, Wehner et al., 2002). Aerosol evaporation was examined by heating the aerosol and comparing the total aerosol mass before and after heating. In the VDMPS system ambient aerosol sample was heated up to temperatures ranging from 80 °C to 280 °C. The higher the heating temperature was the more aerosol material was evaporated. There was a non-volatile residual present in aerosol particles when heated up to 280 °C. This residual explained (20±8)% of the total aerosol mass. Aerosol non-volatile mass fraction was highest during winter and smallest during summer months. The role of black carbon in the observed non-volatile residual was determined. Black carbon explained 40 to 90% of the non-volatile mass. Especially during colder seasons noticeable amount of non-volatile material, something else than black carbon, was observed. According to Kalberer et al. (2004) some atmospheric organic species can form polymers that have high evaporation temperatures. Also low-volatile organic salts may contribute to the non-volatile aerosol (Smith et al., 2010). Aerosol mass composition measured directly with AMS (Aerosol Mass Spectrometer, Jayne et al., 2000) was analyzed in order to examine the properties of the non-volatile material (other than black carbon). The AMS measurements were performed

  17. New CRISPR-Cas systems discovered.

    PubMed

    Yang, Hui; Patel, Dinshaw J

    2017-03-01

    In bacteria and archaea, CRISPR-Cas adaptive immune systems utilize RNA-guided endonucleases to defend against invasion by foreign nucleic acids of bacteriophage, virus and plasmid origin. In a recent paper published in Nature, Burstein et al. identified the first Cas9 protein in uncultivated archaea and two novel CRISPR-CasX and CRISPR-CasY systems in uncultivated bacteria by capitalizing on analysis of terabase-scale metagenomic datasets from natural uncultivated organisms.

  18. Secondary organic aerosol formation from reaction of tertiary amines with nitrate radical

    NASA Astrophysics Data System (ADS)

    Erupe, M. E.; Price, D. J.; Silva, P. J.; Malloy, Q. G. J.; Qi, L.; Warren, B.; Cocker, D. R., III

    2008-09-01

    Secondary organic aerosol formation from the reaction of tertiary amines with nitrate radical was investigated in an indoor environmental chamber. Particle chemistry was monitored using a high resolution aerosol mass spectrometer while gas-phase species were detected using a proton transfer reaction mass spectrometer. Trimethylamine, triethylamine and tributylamine were studied. Results indicate that tributylamine forms the most aerosol mass followed by trimethylamine and triethylamine respectively. Spectra from the aerosol mass spectrometer indicate the formation of complex non-salt aerosol products. We propose a reaction mechanism that proceeds via abstraction of a proton by nitrate radical followed by RO2 chemistry. Rearrangement of the aminyl alkoxy radical through hydrogen shift leads to the formation of hydroxylated amides, which explain most of the higher mass ions in the mass spectra. These experiments show that oxidation of tertiary amines by nitrate radical may be an important night-time source of secondary organic aerosol.

  19. CAS-Induced Difficulties in Learning Mathematics?

    ERIC Educational Resources Information Center

    Jankvist, Uffe Thomas; Misfeldt, Morten

    2015-01-01

    In recent years computer algebra systems (CAS) have become an integrated part of the upper secondary school mathematics program. Despite the many positive possibilities of CAS, there also seems to be a flip side of the coin in relation to actual difficulties in learning mathematics, not least because a strong dependence on CAS for mathematical…

  20. ENCAPSULATED AEROSOLS

    DTIC Science & Technology

    acetate, polymerized rapidly and produced some polymer film encapsulation of the aerosol droplets. A two-stage microcapsule generator was designed...encapsulating material, the generator also produced microcapsules of dibutyl phosphite in polyethylene, nitrocellulose, and natural rubber.

  1. Aerosol Climate Time Series in ESA Aerosol_cci

    NASA Astrophysics Data System (ADS)

    Popp, Thomas; de Leeuw, Gerrit; Pinnock, Simon

    2016-04-01

    Within the ESA Climate Change Initiative (CCI) Aerosol_cci (2010 - 2017) conducts intensive work to improve algorithms for the retrieval of aerosol information from European sensors. Meanwhile, full mission time series of 2 GCOS-required aerosol parameters are completely validated and released: Aerosol Optical Depth (AOD) from dual view ATSR-2 / AATSR radiometers (3 algorithms, 1995 - 2012), and stratospheric extinction profiles from star occultation GOMOS spectrometer (2002 - 2012). Additionally, a 35-year multi-sensor time series of the qualitative Absorbing Aerosol Index (AAI) together with sensitivity information and an AAI model simulator is available. Complementary aerosol properties requested by GCOS are in a "round robin" phase, where various algorithms are inter-compared: fine mode AOD, mineral dust AOD (from the thermal IASI spectrometer, but also from ATSR instruments and the POLDER sensor), absorption information and aerosol layer height. As a quasi-reference for validation in few selected regions with sparse ground-based observations the multi-pixel GRASP algorithm for the POLDER instrument is used. Validation of first dataset versions (vs. AERONET, MAN) and inter-comparison to other satellite datasets (MODIS, MISR, SeaWIFS) proved the high quality of the available datasets comparable to other satellite retrievals and revealed needs for algorithm improvement (for example for higher AOD values) which were taken into account for a reprocessing. The datasets contain pixel level uncertainty estimates which were also validated and improved in the reprocessing. For the three ATSR algorithms the use of an ensemble method was tested. The paper will summarize and discuss the status of dataset reprocessing and validation. The focus will be on the ATSR, GOMOS and IASI datasets. Pixel level uncertainties validation will be summarized and discussed including unknown components and their potential usefulness and limitations. Opportunities for time series extension

  2. Particulate contamination spectrometer. Volume 1: Technical report

    NASA Technical Reports Server (NTRS)

    Schmitt, R. J.; Boyd, B. A.; Linford, R. M. F.

    1975-01-01

    A laser particulate spectrometer (LPS) system was developed to measure the size and speed distributions of particulate (dusts, aerosols, ice particles, etc.) contaminants. Detection of the particulates was achieved by means of light scattering and extinction effects using a single laser beam to cover a size range of 0.8 to 275 microns diameter and a speed range of 0.2 to 20 meter/second. The LPS system was designed to operate in the high vacuum environment of a space simulation chamber with cold shroud temperatures ranging from 77 to 300 K.

  3. Photoacoustic Soot Spectrometer (PASS) Instrument Handbook

    SciTech Connect

    Dubey, M; Springston, S; Koontz, A; Aiken, A

    2013-01-17

    The photoacoustic soot spectrometer (PASS) measures light absorption by aerosol particles. As the particles pass through a laser beam, the absorbed energy heats the particles and in turn the surrounding air, which sets off a pressure wave that can be detected by a microphone. The PASS instruments deployed by ARM can also simultaneously measure the scattered laser light at three wavelengths and therefore provide a direct measure of the single-scattering albedo. The Operator Manual for the PASS-3100 is included here with the permission of Droplet Measurement Technologies, the instrument’s manufacturer.

  4. ACTRIS ACSM intercomparison - Part I: Reproducibility of concentration and fragment results from 13 individual Quadrupole Aerosol Chemical Speciation Monitors (Q-ACSM) and consistency with Time-of-Flight ACSM (ToF-ACSM), High Resolution ToF Aerosol Mass Spectrometer (HR-ToF-AMS) and other co-located instruments

    NASA Astrophysics Data System (ADS)

    Crenn, V.; Sciare, J.; Croteau, P. L.; Verlhac, S.; Fröhlich, R.; Belis, C. A.; Aas, W.; Äijälä, M.; Alastuey, A.; Artiñano, B.; Baisnée, D.; Bonnaire, N.; Bressi, M.; Canagaratna, M.; Canonaco, F.; Carbone, C.; Cavalli, F.; Coz, E.; Cubison, M. J.; Esser-Gietl, J. K.; Green, D. C.; Gros, V.; Heikkinen, L.; Herrmann, H.; Lunder, C.; Minguillón, M. C.; Močnik, G.; O'Dowd, C. D.; Ovadnevaite, J.; Petit, J.-E.; Petralia, E.; Poulain, L.; Priestman, M.; Riffault, V.; Ripoll, A.; Sarda-Estève, R.; Slowik, J. G.; Setyan, A.; Wiedensohler, A.; Baltensperger, U.; Prévôt, A. S. H.; Jayne, J. T.; Favez, O.

    2015-07-01

    As part of the European ACTRIS project, the first large Quadrupole Aerosol Chemical Speciation Monitor (Q-ACSM) intercomparison study was conducted in the region of Paris for three weeks during the late fall-early winter period (November-December 2013). The first week was dedicated to tuning and calibration of each instrument whereas the second and third were dedicated to side-by-side comparison in ambient conditions with co-located instruments providing independent information on submicron aerosol optical, physical and chemical properties. Near real-time measurements of the major chemical species (organic matter, sulfate, nitrate, ammonium and chloride) in the non-refractory submicron aerosols (NR-PM1) were obtained here from 13 Q-ACSM. The results show that these instruments can produce highly comparable and robust measurements of the NR-PM1 total mass and its major components. Taking the median of the 13 Q-ACSM as a reference for this study, strong correlations (r2 > 0.9) were observed systematically for each individual ACSM across all chemical families except for chloride for which three ACSMs showing weak correlations partly due to the very low concentrations during the study. Reproducibility expanded uncertainties of Q-ACSM concentration measurements were determined using appropriate methodologies defined by the International Standard Organization (ISO 17025) and were found to be of 9, 15, 19, 28 and 36 % for NR-PM1, nitrate, organic matter, sulfate and ammonium respectively. However, discrepancies were observed in the relative concentrations of the constituent mass fragments for each chemical component. In particular, significant differences were observed for the organic fragment at mass-to-charge ratio 44, which is a key parameter describing the oxidation state of organic aerosol. Following this first major intercomparison exercise of a large number of ACSMs, detailed intercomparison results are presented as well as a discussion of some recommendations

  5. Final Technical Report [Toward Simultaneous Single-Particle Chemical and Optical Characterization: Development of a Multi-Angle Optical Scattering Module for the Aerosol Time-of-Flight Mass Spectrometer

    SciTech Connect

    Buckley, Steven

    2013-10-22

    This project was an initial effort to investigate the feasibility of an instrument combining real-time atmospheric particle composition measurements using an ATOFMS (Atmospheric Time-Of-Flight Mass Spectrometer) such as those performed by Prather’s group at the University of California, San Diego (UCSD) with multi-wavelength scattering measurements of the type investigated by Sorensen et al., of Kansas State University (KSU). In this Phase I effort we proposed to investigate near-angle scattering and the possibility of integration of a multi-wavelength scattering instrument into the UCSD ATOFMS. After an initial optical design and calculations, we discovered issues with the theory of measurement and with mechanical integration. Evidence emerged that the method of multi-wavelength scattering is only efficacious for spherical particles, while most atmospheric particles are non-spherical fractal aggregates. We also determined that the integration of the detector into existing ATOFMS instruments would be severely limited by volume constraints, and additional volume would require prohibitive additional pumping compared with the existing ATOFMS systems. Based on this evidence, we decided not to pursue a Phase II effort.

  6. Aerosol Size Distribution in the marine regions

    NASA Astrophysics Data System (ADS)

    Markuszewski, Piotr; Petelski, Tomasz; Zielinski, Tymon; Pakszys, Paulina; Strzalkowska, Agata; Makuch, Przemyslaw; Kowalczyk, Jakub

    2014-05-01

    We would like to present the data obtained during the regular research cruises of the S/Y Oceania over a period of time between 2009 - 2012. The Baltic Sea is a very interesting polygon for aerosol measurements, however, also difficult due to the fact that mostly cases of a mixture of continental and marine aerosols are observed. It is possible to measure clear marine aerosol, but also advections of dust from southern Europe or even Africa. This variability of data allows to compare different conditions. The data is also compared with our measurements from the Arctic Seas, which have been made during the ARctic EXperiment (AREX). The Arctic Seas are very suitable for marine aerosol investigations since continental advections of aerosols are far less frequent than in other European sea regions. The aerosol size distribution was measured using the TSI Laser Aerosol Spectrometer model 3340 (99 channels, measurement range 0.09 μm to 7 μm), condensation particle counter (range 0.01 μm to 3 μm) and laser particle counter PMS CSASP-100-HV-SP (range 0.5 μm to 47 μm in 45 channels). Studies of marine aerosol production and transport are important for many Earth sciences such as cloud physics, atmospheric optics, environmental pollution studies and interaction between ocean and atmosphere. All equipment was placed on one of the masts of S/Y Oceania. Measurements using the laser aerosol spectrometer and condensation particle counter were made on one level (8 meters above sea level). Measurements with the laser particle counter were performed at five different levels above the sea level (8, 11, 14, 17 and 20 m). Based on aerosol size distribution the parameterizations with a Log-Normal and a Power-Law distributions were made. The aerosol source functions, characteristic for the region were also determined. Additionally, poor precision of the sea spray emission determination was confirmed while using only the aerosol concentration data. The emission of sea spray depends

  7. The Aerosol, Clouds and Ecosystem (ACE) Mission

    NASA Astrophysics Data System (ADS)

    Schoeberl, M.; Remer, L.; Kahn, R.; Starr, D.; Hildebrand, P.; Colarco, P.; Diner, D.; Vane, D.; Im, E.; Behrenfeld, M.; Stephens, G.; Maring, H.; Bontempi, P.; Martins, J. V.

    2008-12-01

    The Aerosol, Clouds and Ecosystem (ACE) Mission is a second tier Decadal Survey mission designed to characterize the role of aerosols in climate forcing, especially their impact on precipitation and cloud formation. ACE also includes ocean biosphere measurements (chlorophyll and dissolved organic materials) which will be greatly improved by simultaneous measurements of aerosols. The nominal ACE payload includes lidar and multiangle spectropolarimetric polarimetric measurements of aerosols, radar measurements of clouds and multi-band spectrometer for the measurement of ocean ecosystems. An enhancement to ACE payload under consideration includes µ-wave radiometer measurements of cloud ice and water outside the nadir path of the radar/lidar beams. This talk will cover ACE instrument and science options, updates on the science team definition activity and science potential.

  8. In-situ droplet monitoring for self-tuning spectrometers

    DOEpatents

    Montaser, Akbar; Jorabchi, Kaveh; Kahen, Kaveh

    2010-09-28

    A laser scattering based imaging technique is utilized in order to visualize the aerosol droplets in an inductively coupled plasma (ICP) torch from an aerosol source to the site of analytical measurements. The resulting snapshots provide key information about the spatial distribution of the aerosol introduced by direct and indirect injection devices: 1) a direct injection high efficiency nebulizer (DIHEN); 2) a large-bore DIHEN (LB-DIHEN); and 3) a PFA microflow nebulizer with a PFA Scott-type spray chamber. Moreover, particle image velocimetry (PIV) is used to study the in-situ behavior of the aerosol before interaction with, for example, plasma, while the individual surviving droplets are explored by particle tracking velocimetry (PTV). Further, the velocity distribution of the surviving droplets demonstrates the importance of the initial droplet velocities in complete desolvation of the aerosol for optimum analytical performance in ICP spectrometries. These new observations are important in the design of the next-generation direct injection devices for lower sample consumption, higher sensitivity, lower noise levels, suppressed matrix effects, and for developing smart spectrometers. For example, a controller can be provided to control the output of the aerosol source by controlling the configuration of the source or the gas flow rate via feedback information concerning the aerosol.

  9. A Simple Raman Spectrometer.

    ERIC Educational Resources Information Center

    Blond, J. P.; Boggett, D. M.

    1980-01-01

    Discusses some basic physical ideas about light scattering and describes a simple Raman spectrometer, a single prism monochromator and a multiplier detector. This discussion is intended for British undergraduate physics students. (HM)

  10. Composite Spectrometer Prisms

    NASA Technical Reports Server (NTRS)

    Breckinridge, J. B.; Page, N. A.; Rodgers, J. M.

    1985-01-01

    Efficient linear dispersive element for spectrometer instruments achieved using several different glasses in multiple-element prism. Good results obtained in both two-and three-element prisms using variety of different glass materials.

  11. Fourier Transform Spectrometer System

    NASA Technical Reports Server (NTRS)

    Campbell, Joel F. (Inventor)

    2014-01-01

    A Fourier transform spectrometer (FTS) data acquisition system includes an FTS spectrometer that receives a spectral signal and a laser signal. The system further includes a wideband detector, which is in communication with the FTS spectrometer and receives the spectral signal and laser signal from the FTS spectrometer. The wideband detector produces a composite signal comprising the laser signal and the spectral signal. The system further comprises a converter in communication with the wideband detector to receive and digitize the composite signal. The system further includes a signal processing unit that receives the composite signal from the converter. The signal processing unit further filters the laser signal and the spectral signal from the composite signal and demodulates the laser signal, to produce velocity corrected spectral data.

  12. Tropospheric Aerosols

    NASA Astrophysics Data System (ADS)

    Buseck, P. R.; Schwartz, S. E.

    2003-12-01

    It is widely believed that "On a clear day you can see forever," as proclaimed in the 1965 Broadway musical of the same name. While an admittedly beautiful thought, we all know that this concept is only figurative. Aside from Earth's curvature and Rayleigh scattering by air molecules, aerosols - colloidal suspensions of solid or liquid particles in a gas - limit our vision. Even on the clearest day, there are billions of aerosol particles per cubic meter of air.Atmospheric aerosols are commonly referred to as smoke, dust, haze, and smog, terms that are loosely reflective of their origin and composition. Aerosol particles have arisen naturally for eons from sea spray, volcanic emissions, wind entrainment of mineral dust, wildfires, and gas-to-particle conversion of hydrocarbons from plants and dimethylsulfide from the oceans. However, over the industrial period, the natural background aerosol has been greatly augmented by anthropogenic contributions, i.e., those produced by human activities. One manifestation of this impact is reduced visibility (Figure 1). Thus, perhaps more than in other realms of geochemistry, when considering the composition of the troposphere one must consider the effects of these activities. The atmosphere has become a reservoir for vast quantities of anthropogenic emissions that exert important perturbations on it and on the planetary ecosystem in general. Consequently, much recent research focuses on the effects of human activities on the atmosphere and, through them, on the environment and Earth's climate. For these reasons consideration of the geochemistry of the atmosphere, and of atmospheric aerosols in particular, must include the effects of human activities. (201K)Figure 1. Impairment of visibility by aerosols. Photographs at Yosemite National Park, California, USA. (a) Low aerosol concentration (particulate matter of aerodynamic diameter less than 2.5 μm, PM2.5=0.3 μg m-3; particulate matter of aerodynamic diameter less than 10

  13. CRISPR/Cas9 Technologies.

    PubMed

    Williams, Bart O; Warman, Matthew L

    2017-02-23

    The Clustered Regularly Interspaced Palindromic Repeats (CRISPR)/CRISPR-associated protein (Cas) pathway is revolutionizing biological research. Modifications to this primitive prokaryotic immune system now enable scientists to efficiently edit DNA or modulate gene expression in living eukaryotic cells and organisms. Thus, many laboratories can now perform important experiments that previously were considered scientifically risky or too costly. Here, we describe the components of the CRISPR/Cas system that have been engineered for use in eukaryotes. We also explain how this system can be used to genetically modify cell lines and model organisms, or regulate gene expression in order to search for new participants in biological pathways. © 2017 American Society for Bone and Mineral Research.

  14. Deriving the concentration of airborne ash with a CAS-DPOL instrument: assessing uncertainties introduced by the instrument design

    NASA Astrophysics Data System (ADS)

    Spanu, Antonio; Weinzierl, Bernadett; Freudenthaler, Volker; Sauer, Daniel; Gasteiger, Josef

    2016-04-01

    sensitive to the sample flow and on the mechanical instrument design. Using a fluid dynamics model coupled with an optical model we analyze the effects of instrument design on the measurement, identify measurement uncertainties and recommend strategies to reduce the uncertainties. The two main results are that the optical design of the CAS-DPOL aerosol spectrometer can lead to an under-counting bias of up to 40% for larger particles and an over-counting bias of 20%-30% for smaller particles. Secondly, depending on how the instrument is mounted on the plane, the sampling can be subject to a significantly larger size selection bias than typically recognized, especially if the mounting leads to irregular sampling conditions. To correct both problems a new correction algorithm is described generalizing the results also to other optical particle counters. Finally, a comparison study is presented showing the effects on mass estimation and radiative forcing for uncorrected and corrected data also stating the resulting uncertainty.

  15. Airborne Aerosol Closure Studies During PRIDE

    NASA Technical Reports Server (NTRS)

    Redemann, Jens; Livingston, John M.; Russell, Philip B.; Schmid, Beat; Reid, Jeff

    2000-01-01

    The Puerto Rico Dust Experiment (PRIDE) was conducted during June/July of 2000 to study the properties of Saharan dust aerosols transported across the Atlantic Ocean to the Caribbean Islands. During PRIDE, the NASA Ames Research Center six-channel (380 - 1020 nm) airborne autotracking sunphotometer (AATS-6) was operated aboard a Piper Navajo airplane alongside a suite of in situ aerosol instruments. The in situ aerosol instrumentation relevant to this paper included a Forward Scattering Spectrometer Probe (FSSP-100) and a Passive Cavity Aerosol Spectrometer Probe (PCASP), covering the radius range of approx. 0.05 to 10 microns. The simultaneous and collocated measurement of multi-spectral aerosol optical depth and in situ particle size distribution data permits a variety of closure studies. For example, vertical profiles of aerosol optical depth obtained during local aircraft ascents and descents can be differentiated with respect to altitude and compared to extinction profiles calculated using the in situ particle size distribution data (and reasonable estimates of the aerosol index of refraction). Additionally, aerosol extinction (optical depth) spectra can be inverted to retrieve estimates of the particle size distributions, which can be compared directly to the in situ size distributions. In this paper we will report on such closure studies using data from a select number of vertical profiles at Cabras Island, Puerto Rico, including measurements in distinct Saharan Dust Layers. Preliminary results show good agreement to within 30% between mid-visible aerosol extinction derived from the AATS-6 optical depth profiles and extinction profiles forward calculated using 60s-average in situ particle size distributions and standard Saharan dust aerosol refractive indices published in the literature. In agreement with tendencies observed in previous studies, our initial results show an underestimate of aerosol extinction calculated based on the in situ size distributions

  16. Measurement of mass distribution of chemical species in aerosol particles

    NASA Technical Reports Server (NTRS)

    Sinha, M. P.; Friedlander, S. K.

    1984-01-01

    Aerosols may be generated through the nebulizing of solutions and the evaporation of their solvent, leaving the dry solute particles. Attention is presently given to a method for the direct determination of the masses of chemical species in individual aerosol particles on a continuous, real-time basis, using mass spectrometry. After the aerosol particles are introduced into the ion source of a quadrupole mass spectrometer, the particles impinge on a hot rhenium filament in the mass spectrometer's ion source. The resulting vapor plume is ionized by electron bombardment, and a pulse of ions is generated by each particle. The intensities of different masses in the ion pulses can then be measured by the mass spectrometer.

  17. Spectrometer technology recommendations

    NASA Technical Reports Server (NTRS)

    Wilson, William J.

    1988-01-01

    A typical heterodyne remote sensing system contains three major elements: the antenna, the radiometer, and the spectrometer. The radiometer consists of the local oscillator, the mixer, and the intermediate frequency amplifiers. This subsystem performs the function of down converting the high frequency incident thermal emission signal to a lower intermediate frequency. The spectrometer measures the power spectrum of the down-converted signal simultaneously in many contiguous frequency channels. Typical spectrum analysis requirements involve measurement of signal bandwidths of 100 to 1000 MHz with a channel resolution of 0.5 to 10 MHz. Three general approaches are used for spectrometers: (1) filter banks, (2) Acousto-Optic Spectrometers (AOS's), and (3) digital autocorrelators. In contrast to the two frequency domain techniques, an autocorrelator works in the time domain. The autocorrelation function (ACF) of the incoming signal is computed and averaged over the integration time. The averaged ACF is then Fourier transformed to obtain the signal power spectrum. Significant progress was made in the development of sub mm antennas and radiometers. It is now time to begin research in the development of low power spaceborne spectrometers and to reduce their size and weight. The near-term research goal will be to develop a prototype digital autocorrelation spectrometer, using VLSI gate array technology, which will have a small size, low power requirements, and can be used in spacecraft mm and sub mm radiometer systems. The long-range objective of this technology development is to make extremely low power, less than 10 mW/channel, small and stable wideband spectrometers which can be used in future mm and sub mm wavelength space missions such as the Large Deployable Reflector.

  18. Spectrometer technology recommendations

    NASA Astrophysics Data System (ADS)

    Wilson, William J.

    1988-08-01

    A typical heterodyne remote sensing system contains three major elements: the antenna, the radiometer, and the spectrometer. The radiometer consists of the local oscillator, the mixer, and the intermediate frequency amplifiers. This subsystem performs the function of down converting the high frequency incident thermal emission signal to a lower intermediate frequency. The spectrometer measures the power spectrum of the down-converted signal simultaneously in many contiguous frequency channels. Typical spectrum analysis requirements involve measurement of signal bandwidths of 100 to 1000 MHz with a channel resolution of 0.5 to 10 MHz. Three general approaches are used for spectrometers: (1) filter banks, (2) Acousto-Optic Spectrometers (AOS's), and (3) digital autocorrelators. In contrast to the two frequency domain techniques, an autocorrelator works in the time domain. The autocorrelation function (ACF) of the incoming signal is computed and averaged over the integration time. The averaged ACF is then Fourier transformed to obtain the signal power spectrum. Significant progress was made in the development of sub mm antennas and radiometers. It is now time to begin research in the development of low power spaceborne spectrometers and to reduce their size and weight. The near-term research goal will be to develop a prototype digital autocorrelation spectrometer, using VLSI gate array technology, which will have a small size, low power requirements, and can be used in spacecraft mm and sub mm radiometer systems. The long-range objective of this technology development is to make extremely low power, less than 10 mW/channel, small and stable wideband spectrometers which can be used in future mm and sub mm wavelength space missions such as the Large Deployable Reflector.

  19. Genome modification by CRISPR/Cas9.

    PubMed

    Ma, Yuanwu; Zhang, Lianfeng; Huang, Xingxu

    2014-12-01

    Clustered regularly interspaced short palindromic repeats (CRISPR)-CRISPR-associated protein (Cas)9-mediated genome modification enables us to edit the genomes of a variety of organisms rapidly and efficiently. The advantages of the CRISPR-Cas9 system have made it an increasingly popular genetic engineering tool for biological and therapeutic applications. Moreover, CRISPR-Cas9 has been employed to recruit functional domains that repress/activate gene expression or label specific genomic loci in living cells or organisms, in order to explore developmental mechanisms, gene expression regulation, and animal behavior. One major concern about this system is its specificity; although CRISPR-Cas9-mediated off-target mutation has been broadly studied, more efforts are required to further improve the specificity of CRISPR-Cas9. We will also discuss the potential applications of CRISPR-Cas9.

  20. Expanding CRISPR/Cas9 Genome Editing Capacity in Zebrafish Using SaCas9

    PubMed Central

    Feng, Yan; Chen, Cheng; Han, Yuxiang; Chen, Zelin; Lu, Xiaochan; Liang, Fang; Li, Song; Qin, Wei; Lin, Shuo

    2016-01-01

    The type II CRISPR/Cas9 system has been used widely for genome editing in zebrafish. However, the requirement for the 5′-NGG-3′ protospacer-adjacent motif (PAM) of Cas9 from Streptococcus pyogenes (SpCas9) limits its targeting sequences. Here, we report that a Cas9 ortholog from Staphylococcus aureus (SaCas9), and its KKH variant, successfully induced targeted mutagenesis with high frequency in zebrafish. Confirming previous findings, the SpCas9 variant, VQR, can also induce targeted mutations in zebrafish. Bioinformatics analysis of these new Cas targets suggests that the number of available target sites in the zebrafish genome can be greatly expanded. Collectively, the expanded target repertoire of Cas9 in zebrafish should further facilitate the utility of this organism for genetic studies of vertebrate biology. PMID:27317783

  1. Analysis of Ambient Aerosol Measurements During PROPHET 2001

    NASA Astrophysics Data System (ADS)

    Delia, A. E.; Garland, R.; Toohey, D. W.; Worsnop, D. R.; Allen, J. O.; Carroll, M. A.; Fortner, E.; Hengel, S.; Lilly, M.; Moody, J.; Huey, G.; Tanner, D.

    2002-12-01

    Aerosol size and composition were measured using an aerosol mass spectrometer, developed by Aerodyne Research, Inc., during PROPHET 2001 (Program for Research on Oxidants: PHotochemistry, Emissions and Transport). Our purpose in this study was to characterize chemical composition and size of ambient aerosols, investigate the effects of transport, and study aerosol microphysics. The site is located in a remote forested area of northern Michigan at the University of Michigan Biological Station, far from any large urban areas and surrounded primarily by deciduous forests. The aerosols at this site can be cataloged into four classes. The two principal classes are distinguished by meteorological conditions. Clean, northerly airflow produced low aerosol mass loadings dominated by organic species. More polluted southerly airflow brought higher aerosol mass loadings dominated by sulfate with an organic contribution. Under both of these conditions, aerosol existed almost entirely in the accumulation size mode of 300-600 nm. In addition to these principal aerosol types, small particle growth was observed on several occasions. It appears that these events occurred primarily during periods of low aerosol mass loading (i.e., northerly airflow) when the low aerosol number provided an opportunity for new particle formation and rapid growth. On at least one occasion, it appears that a large plume of sulfur dioxide that was converted to sulfuric acid near the site may be responsible for new particle formation. The fourth type of aerosol consisted of short events dominated by organic species, apparently diesel exhaust caused by local truck traffic. In addition to the overall aerosol characterization, comparisons with other measurements that affected the aerosol composition or characterized the air masses will be presented and the implications of these results for regional transport of aerosols will be discussed.

  2. Influences of upwind emission sources and atmospheric processing on aerosol chemistry and properties at a rural location in the Northeastern U.S.: URBAN INFLUENCE ON RURAL AEROSOL

    SciTech Connect

    Zhou, Shan; Collier, Sonya; Xu, Jianzhong; Mei, Fan; Wang, Jian; Lee, Yin-Nan; Sedlacek, Arthur J.; Springston, Stephen R.; Sun, Yele; Zhang, Qi

    2016-05-19

    Continuous real-time measurements of atmospheric aerosol with an Aerodyne High-Resolution Time-of-Flight Aerosol Mass Spectrometer (HR-AMS) coupled with a fast temperature-stepping thermodenuder were carried out in summer 2011 at Brookhaven National Laboratory (BNL, 40.871°N, 72.89°W) during the DOE Aerosol Life Cycle Intensive Operational Period (ALC-IOP) campaign.

  3. Aerosols of Mongolian arid area

    NASA Astrophysics Data System (ADS)

    Golobokova, L.; Marinayte, I.; Zhamsueva, G.

    2012-04-01

    Sampling was performed in July-August 2005-2010 at Station Sain Shand (44°54'N, 110°07'E) in the Gobi desert (1000 m a.s.l.), West Mongolia. Aerosol samples were collected with a high volume sampler PM 10 (Andersen Instruments Inc., USA) onto Whatman-41 filters. The substance was extracted from the filters by de-ionized water. The solution was screened through an acetate-cellulose filter with 0.2 micron pore size. Ions of ammonium, sodium, potassium, magnesium, and calcium, as well as sulphate ions, nitrate ions, hydrocarbonate, chloride ions were determined in the filtrate by means of an atomic adsorption spectrometer Carl Zeiss Jena (Germany), a high performance liquid chromatographer «Milichrome A-02» (Russia), and an ionic chromatographer ICS-3000 (Dionex, USA). The PAH fraction was separated from aerosol samples using hexane extraction at room temperature under UV environment. The extract was concentrated to 0.1-0.2 ml and analysed by a mass-spectrometer "Agilent, GC 6890, MSD 5973 Network". Analysis of concentrations of aerosols components, their correlation ratios, and meteorological modeling show that the main factor affecting chemical composition of aerosols is a flow of contaminants transferred by air masses to the sampling area mainly from the south and south-east, as well as wind conditions of the area, dust storms in particular. Sulphate, nitrate, and ammonium are major ions in aerosol particles at Station Sain Shand. Dust-borne aerosol is known to be a sorbent for both mineral and organic admixtures. Polycyclic aromatic hydrocarbons (PAH) being among superecotoxicants play an important role among resistant organic substances. PAH concentrations were determined in the samples collected in 2010. All aerosol samples contained dominant PAHs with 5-6 benzene rings ( (benze(k)fluoranthen, benze(b)flouranthen, benze(a)pyren, benze(?)pyren, perylene, benze(g,h,i)perylene, and indene(1,2,3-c,d)pyrene). Their total quantity varied between 42 and 90

  4. Characterization of urban aerosol using aerosol mass spectrometry and proton nuclear magnetic resonance spectroscopy

    NASA Astrophysics Data System (ADS)

    Cleveland, M. J.; Ziemba, L. D.; Griffin, R. J.; Dibb, J. E.; Anderson, C. H.; Lefer, B.; Rappenglück, B.

    2012-07-01

    Particulate matter was measured during August and September of 2006 in Houston as part of the Texas Air Quality Study II Radical and Aerosol Measurement Project. Aerosol size and composition were determined using an Aerodyne quadrupole aerosol mass spectrometer. Aerosol was dominated by sulfate (4.1 ± 2.6 μg m-3) and organic material (5.5 ± 4.0 μg m-3), with contributions of organic material from both primary (˜32%) and secondary (˜68%) sources. Secondary organic aerosol appears to be formed locally. In addition, 29 aerosol filter samples were analyzed using proton nuclear magnetic resonance (1H NMR) spectroscopy to determine relative concentrations of organic functional groups. Houston aerosols are less oxidized than those observed elsewhere, with smaller relative contributions of carbon-oxygen double bonds. These particles do not fit 1H NMR source apportionment fingerprints for identification of secondary, marine, and biomass burning organic aerosol, suggesting that a new fingerprint for highly urbanized and industrially influenced locations be established.

  5. A review of atmospheric aerosol measurements

    NASA Astrophysics Data System (ADS)

    McMurry, Peter H.

    carbon mass concentration is beset by difficulties including the unknown extent of evaporative losses during sampling, adsorption of gas-phase organic compounds onto sampling substrates, and the unknown relationship between carbon mass and mass of the particulate organics. The development of improved methodologies for such measurements should be a high priority for the future. Mass spectrometers that measure the composition of individual particles have recently been developed. It is not clear that these instruments will provide quantitative information on species mass concentrations, and more work is needed to routinely interpret the vast quantities of data generated during field sampling. Nevertheless, these instruments substantially expand the range of atmospheric aerosol issues that can be explored experimentally. These instruments represent the most significant advance in aerosol instrumentation in recent years.

  6. Electron-proton spectrometer

    NASA Technical Reports Server (NTRS)

    Winckler, J. R.

    1973-01-01

    An electron-proton spectrometer was designed to measure the geomagnetically trapped radiation in a geostationary orbit at 6.6 earth radii in the outer radiation belt. This instrument is to be flown on the Applications Technology Satellite-F (ATS-F). The electron-proton spectrometer consists of two permanent magnet surface barrier detector arrays and associated electronics capable of selecting and detecting electrons in three energy ranges: (1) 30-50 keV, (2) 150-200 keV, and (3) 500 keV and protons in three energy ranges. The electron-proton spectrometer has the capability of measuring the fluxes of electrons and protons in various directions with respect to the magnetic field lines running through the satellite. One magnet detector array system is implemented to scan between EME north and south through west, sampling the directional flux in 15 steps. The other magnet-detector array system is fixed looking toward EME east.

  7. Broad band waveguide spectrometer

    DOEpatents

    Goldman, Don S.

    1995-01-01

    A spectrometer for analyzing a sample of material utilizing a broad band source of electromagnetic radiation and a detector. The spectrometer employs a waveguide possessing an entry and an exit for the electromagnetic radiation emanating from the source. The waveguide further includes a surface between the entry and exit portions which permits interaction between the electromagnetic radiation passing through the wave guide and a sample material. A tapered portion forms a part of the entry of the wave guide and couples the electromagnetic radiation emanating from the source to the waveguide. The electromagnetic radiation passing from the exit of the waveguide is captured and directed to a detector for analysis.

  8. The GRIFFIN spectrometer

    NASA Astrophysics Data System (ADS)

    Svensson, C. E.; Garnsworthy, A. B.

    2014-01-01

    Gamma-Ray Infrastructure For Fundamental Investigations of Nuclei (GRIFFIN) is an advanced new high-efficiency γ-ray spectrometer being developed for use in decay spectroscopy experiments with low-energy radioactive ion beams provided by TRIUMF's Isotope Separator and Accelerator (ISAC-I) radioactive ion beam facility. GRIFFIN will be comprised of sixteen large-volume clover-type high-purity germanium (HPGe) γ-ray detectors coupled to custom digital signal processing electronics and used in conjunction with a suite of auxiliary detection systems. This article provides an overview of the GRIFFIN spectrometer and its expected performance characteristics.

  9. The Apollo Alpha Spectrometer.

    NASA Technical Reports Server (NTRS)

    Jagoda, N.; Kubierschky, K.; Frank, R.; Carroll, J.

    1973-01-01

    Located in the Science Instrument Module of Apollo 15 and 16, the Alpha Particle Spectrometer was designed to detect and measure the energy of alpha particles emitted by the radon isotopes and their daughter products. The spectrometer sensor consisted of an array of totally depleted silicon surface barrier detectors. Biased amplifier and linear gate techniques were utilized to reduce resolution degradation, thereby permitting the use of a single 512 channel PHA. Sensor identification and in-flight radioactive calibration were incorporated to enhance data reduction.

  10. Comparison of imaging spectrometers

    SciTech Connect

    Bennett, C

    2000-01-09

    Realistic signal to noise performance estimates for the various types of instruments being considered for NGST are compared, based on the point source detection values quoted in the available ISIM final reports. The corresponding sensitivity of the various types of spectrometers operating in a full field imaging mode, for both emission line objects and broad spectral distribution objects, is computed and displayed. For the purpose of seeing the earliest galaxies, or the faintest possible emission line sources, the imaging Fourier transform spectrometer emerges superior to all others, by orders of magnitude in speed.

  11. Portable reflectance spectrometer

    NASA Technical Reports Server (NTRS)

    Goetz, A. F. H.; Graham, R. A.; Ozawa, T. (Inventor)

    1977-01-01

    A portable reflectance spectrometer is disclosed. The spectrometer essentially includes an optical unit and an electronic recording unit. The optical unit includes a pair of thermoelectrically-cooled detectors, for detecting total radiance and selected radiance projected through a circular variable filter wheel, and is capable of operating to provide spectral data in the range 0.4 to 2.5 micrometers without requiring coventional substitution of filter elements. The electronic recording unit includes power supplies, amplifiers, and digital recording electronics designed to permit recordation of data on tape casettes. Both the optical unit and electronic recording unit are packaged to be manually portable.

  12. Miniaturised TOF mass spectrometer

    NASA Astrophysics Data System (ADS)

    Rohner, U.; Wurz, P.; Whitby, J.

    2003-04-01

    For the BepiColombo misson of ESA to Mercury, we built a prototype of a miniaturised Time of Flight mass spectrometer with a low mass and low power consumption. Particles will be set free form the surface and ionized by short laser pluses. The mass spectrometer is dedicated to measure the elemental and isotopic composition of almost all elements of Mercurys planetary surface with an adequate dynamique range, mass range and mass resolution. We will present first results of our prototype and future designs.

  13. Does the Madden-Julian Oscillation influence aerosol variability?

    NASA Astrophysics Data System (ADS)

    Tian, Baijun; Waliser, Duane E.; Kahn, Ralph A.; Li, Qinbin; Yung, Yuk L.; Tyranowski, Tomasz; Geogdzhayev, Igor V.; Mishchenko, Michael I.; Torres, Omar; Smirnov, Alexander

    2008-06-01

    We investigate the modulation of aerosols by the Madden-Julian Oscillation (MJO) using multiple, global satellite aerosol products: aerosol index (AI) from the Total Ozone Mapping Spectrometer (TOMS) on Nimbus-7, and aerosol optical thickness (AOT) from the Moderate Resolution Imaging Spectroradiometer (MODIS) on Terra and Aqua and the Advanced Very High Resolution Radiometer (AVHRR) on NOAA satellites. A composite MJO analysis indicates that large variations in the TOMS AI and MODIS/AVHRR AOT are found over the equatorial Indian and western Pacific Oceans where MJO convection is active, as well as the tropical Africa and Atlantic Ocean where MJO convection is weak but the background aerosol level is high. A strong inverse linear relationship between the TOMS AI and rainfall anomalies, but a weaker, less coherent positive correlation between the MODIS/AVHRR AOT and rainfall anomalies, were found. The MODIS/AVHRR pattern is consistent with ground-based Aerosol Robotic Network data. These results indicate that the MJO and its associated cloudiness, rainfall, and circulation variability systematically influence the variability in remote sensing aerosol retrieval results. Several physical and retrieval algorithmic factors that may contribute to the observed aerosol-rainfall relationships are discussed. Preliminary analysis indicates that cloud contamination in the aerosol retrievals is likely to be a major contributor to the observed relationships, although we cannot exclude possible contributions from other physical mechanisms. Future research is needed to fully understand these complex aerosol-rainfall relationships.

  14. Overview of the Cumulus Humilis Aerosol Processing Study

    SciTech Connect

    Berg, Larry K.; Berkowitz, Carl M.; Ogren, John A.; Hostetler, Chris A.; Ferrare, Richard; Dubey, Manvendra K.; Andrews, Elizabeth; Coulter, Richard L.; Hair, John; Hubbe, John M.; Lee, Yin-Nan; Mazzoleni, Claudio; Olfert, Jason N.; Springston, Stephen R.

    2009-11-30

    The primary goal of the Cumulus Humilis Aerosol Processing Study (CHAPS) was to characterize and contrast freshly emitted aerosols below, above, and within fields of cumuli, and to study changes to the cloud microphysical structure within these same cloud fields. The CHAPS is one of very few studies that have had an Aerosol Mass Spectrometer (AMS) sampling downstream of a counter-flow virtual impactor (CVI) inlet on an aircraft, allowing the examination of the chemical composition of the nucleated aerosols within the cumuli. The results from the CHAPS will provide insights into changes in the aerosol chemical and optical properties as aerosols move through shallow cumuli downwind of a moderately sized city. Three instrument platforms were employed during the CHAPS, including the U.S. Department of Energy Gulfstream-1 aircraft, which was equipped for in situ sampling of aerosol optical and chemical properties; the NASA-Langley King Air B200, which carried the downward looking NASA Langley High Spectral Resolution Lidar (HSRL) to measure profiles of aerosol backscatter, extinction, and depolarization between the King Air and the surface; and a surface site equipped for continuous in situ measurements of aerosol properties, profiles of aerosol backscatter, and meteorological conditions including total sky cover and thermodynamic profiles of the atmosphere. In spite of record precipitation over central Oklahoma, a total of eight research flights were made by the G-1, and eighteen by the B200, including special satellite verification flights timed to coincide with NASA satellite A-Train overpasses.

  15. Synthesizing Scientific Progress: Outcomes from US EPA’s Carbonaceous Aerosols and Source Apportionment STAR Grants

    EPA Science Inventory

    ABSTRACTA number of studies in the past decade have transformed the way we think about atmospheric aerosols. The advances include, but are not limited to, source apportionment of organics using aerosol mass spectrometer data, the volatility basis set approach, quantifying isopre...

  16. ENCAPSULATED AEROSOLS

    DTIC Science & Technology

    materials determine the range of applicability of each method. A useful microencapsulation method, based on coagulation by inertial force was developed...The generation apparatus, consisting of two aerosol generators in series, was utilized to produce many kinds of microcapsules . A fluid energy mill...was found useful for the production of some microcapsules . The permeability of microcapsule films and the effect of exposure time and humidity were

  17. Miniature Differential Mobility Analyzer for Compact Field-Portable Spectrometers.

    PubMed

    Qi, Chaolong; Kulkarni, Pramod

    2016-01-01

    A low-flow miniature differential mobility analyzer (mDMA) has been developed for compact field-portable mobility spectrometers to classify the submicrometer aerosol. The mDMA was designed for an ultra-low aerosol flow rate of 0.05 L/min. At a sheath flow rate of 0.2 L/min, the mDMA's upper size limit was estimated to be about 921 nm. The mDMA has a classification zone of 2.54 cm long, an outer diameter of 2.54 cm, and an inner diameter of 1.778 cm. The design allows low-cost fabrication and easy assembly. Tandem DMA (TDMA) measurements were carried out to evaluate the performance of the mDMA. Its transfer function was described using Stolzenburg's model. The experimentally measured transfer function shows close agreement with the theory. The transmission efficiency was comparable to that of the Knutson-Whitby DMA for particles in the range of 10-1000 nm. The mobility resolution was comparable to that of the TSI 3085 nanoDMA at the same aerosol flow rate. The design features and performance of the mDMA make it suitable for compact field portable mobility size spectrometers for measurement of nanoparticles and submicrometer aerosol.

  18. Mass Spectrometers in Space!

    NASA Technical Reports Server (NTRS)

    Brinckerhoff, William B.

    2012-01-01

    Exploration of our solar system over several decades has benefitted greatly from the sensitive chemical analyses offered by spaceflight mass spectrometers. When dealing with an unknown environment, the broadband detection capabilities of mass analyzers have proven extremely valuable in determining the composition and thereby the basic nature of space environments, including the outer reaches of Earth s atmosphere, interplanetary space, the Moon, and the planets and their satellites. Numerous mass analyzer types, including quadrupole, monopole, sector, ion trap, and time-of-flight have been incorporated in flight instruments and delivered robotically to a variety of planetary environments. All such instruments went through a rigorous process of application-specific development, often including significant miniaturization, testing, and qualification for the space environment. Upcoming missions to Mars and opportunities for missions to Venus, Europa, Saturn, Titan, asteroids, and comets provide new challenges for flight mass spectrometers that push to state of the art in fundamental analytical technique. The Sample Analysis at Mars (SAM) investigation on the recently-launch Mars Science Laboratory (MSL) rover mission incorporates a quadrupole analyzer to support direct evolved gas as well as gas chromatograph-based analysis of martian rocks and atmosphere, seeking signs of a past or present habitable environment. A next-generation linear ion trap mass spectrometer, using both electron impact and laser ionization, is being incorporated into the Mars Organic Molecule Analyzer (MOMA) instrument, which will be flown to Mars in 2018. These and other mass spectrometers and mission concepts at various stages of development will be described.

  19. Cas6 specificity and CRISPR RNA loading in a complex CRISPR-Cas system.

    PubMed

    Sokolowski, Richard D; Graham, Shirley; White, Malcolm F

    2014-06-01

    CRISPR-Cas is an adaptive prokaryotic immune system, providing protection against viruses and other mobile genetic elements. In type I and type III CRISPR-Cas systems, CRISPR RNA (crRNA) is generated by cleavage of a primary transcript by the Cas6 endonuclease and loaded into multisubunit surveillance/effector complexes, allowing homology-directed detection and cleavage of invading elements. Highly studied CRISPR-Cas systems such as those in Escherichia coli and Pseudomonas aeruginosa have a single Cas6 enzyme that is an integral subunit of the surveillance complex. By contrast, Sulfolobus solfataricus has a complex CRISPR-Cas system with three types of surveillance complexes (Cascade/type I-A, CSM/type III-A and CMR/type III-B), five Cas6 paralogues and two different CRISPR-repeat families (AB and CD). Here, we investigate the kinetic properties of two different Cas6 paralogues from S. solfataricus. The Cas6-1 subtype is specific for CD-family CRISPR repeats, generating crRNA by multiple turnover catalysis whilst Cas6-3 has a broader specificity and also processes a non-coding RNA with a CRISPR repeat-related sequence. Deep sequencing of crRNA in surveillance complexes reveals a biased distribution of spacers derived from AB and CD loci, suggesting functional coupling between Cas6 paralogues and their downstream effector complexes.

  20. CAS as Environments for Implementing Mathematical Microworlds.

    ERIC Educational Resources Information Center

    Alpers, Burkhard

    2002-01-01

    Investigates whether computer algebra systems (CAS) are suitable environments for implementing mathematical microworlds. Recalls what constitutes a microworld and explores how CAS can be used for implementation, stating potentials as well as limitations. Provides as an example the microworld "Formula 1", implemented in Maple Software. (Author/KHR)

  1. IR spectrometers for Venus and Mars measurements

    NASA Astrophysics Data System (ADS)

    Drummond, Rachel; Neefs, Eddy; Vandaele, Ann C.

    2012-07-01

    The SOIR spectrometer [1] is an infra-red spectrometer that has performed over 500 solar occultation measurements of the Venus atmosphere, profiling major and minor constituents and studying aerosol absorption, temperature and pressure effects. NOMAD is a 3-channel spectrometer for Mars occultation, limb and nadir measurements. 2 channels are infra-red, the other UV-visible. We will present the technology that enables SOIR and NOMAD to get to parts per billion mixing ratio sensitivities for trace atmospheric components and highlight the improvements made to the SOIR design to enable nadir viewing with NOMAD. Key components include the Acousto-Optical Tunable Filter with radio frequency driver that allows these spectrometers to select the wavelength domain under observation with no need for mechanical moving parts. It also allows background measurements because it is opaque when no RF is applied. The grating with 4 grooves/mm is a very hard to manufacture optical component, and suppliers were very difficult to find. The detector-cooler combination (working at 90K) is from Sofradir/Ricor and the model on board Venus Express is still working after 6 years in space (more on/off cycles that ON hour lifetime problem). The detector MCT mix is slightly altered for nadir observation, in order to reduce thermal background noise and the nadir channel spectrometer is cooled down to 173K by a large V-groove radiator. All the optical components have been enlarged to maximise signal throughput and the slit (that determines spatial and spectral resolution) has also been increased. The spacecraft attitude control system switches from yaw steering for nadir to inertial pointing for solar occultations. 1. Nevejans, D., E. Neefs, E. Van Ransbeeck, S. Berkenbosch, R. Clairquin, L. De Vos, W. Moelans, S. Glorieux, A. Baeke, O. Korablev, I. Vinogradov, Y. Kalinnikov, B. Bach, J.P. Dubois, and E. Villard, Compact high-resolution space-borne echelle grating spectrometer with AOTF based on

  2. CasA mediates Cas3-catalyzed target degradation during CRISPR RNA-guided interference.

    PubMed

    Hochstrasser, Megan L; Taylor, David W; Bhat, Prashant; Guegler, Chantal K; Sternberg, Samuel H; Nogales, Eva; Doudna, Jennifer A

    2014-05-06

    In bacteria, the clustered regularly interspaced short palindromic repeats (CRISPR)-associated (Cas) DNA-targeting complex Cascade (CRISPR-associated complex for antiviral defense) uses CRISPR RNA (crRNA) guides to bind complementary DNA targets at sites adjacent to a trinucleotide signature sequence called the protospacer adjacent motif (PAM). The Cascade complex then recruits Cas3, a nuclease-helicase that catalyzes unwinding and cleavage of foreign double-stranded DNA (dsDNA) bearing a sequence matching that of the crRNA. Cascade comprises the CasA-E proteins and one crRNA, forming a structure that binds and unwinds dsDNA to form an R loop in which the target strand of the DNA base pairs with the 32-nt RNA guide sequence. Single-particle electron microscopy reconstructions of dsDNA-bound Cascade with and without Cas3 reveal that Cascade positions the PAM-proximal end of the DNA duplex at the CasA subunit and near the site of Cas3 association. The finding that the DNA target and Cas3 colocalize with CasA implicates this subunit in a key target-validation step during DNA interference. We show biochemically that base pairing of the PAM region is unnecessary for target binding but critical for Cas3-mediated degradation. In addition, the L1 loop of CasA, previously implicated in PAM recognition, is essential for Cas3 activation following target binding by Cascade. Together, these data show that the CasA subunit of Cascade functions as an essential partner of Cas3 by recognizing DNA target sites and positioning Cas3 adjacent to the PAM to ensure cleavage.

  3. In vitro enzymology of Cas9.

    PubMed

    Anders, Carolin; Jinek, Martin

    2014-01-01

    Cas9 is a bacterial RNA-guided endonuclease that uses base pairing to recognize and cleave target DNAs with complementarity to the guide RNA. The programmable sequence specificity of Cas9 has been harnessed for genome editing and gene expression control in many organisms. Here, we describe protocols for the heterologous expression and purification of recombinant Cas9 protein and for in vitro transcription of guide RNAs. We describe in vitro reconstitution of the Cas9-guide RNA ribonucleoprotein complex and its use in endonuclease activity assays. The methods outlined here enable mechanistic characterization of the RNA-guided DNA cleavage activity of Cas9 and may assist in further development of the enzyme for genetic engineering applications.

  4. CAS

    SciTech Connect

    Martinez, B.; Pomeroy, G. )

    1989-12-02

    The Security Alarm System is a data acquisition and control system which collects data from intrusion sensors and displays the information in a real-time environment for operators. The Access Control System monitors and controls the movement of personnel with the use of card readers and biometrics hand readers.

  5. SAGE II aerosol validation - Selected altitude measurements, including particle micromeasurements

    NASA Technical Reports Server (NTRS)

    Oberbeck, Verne R.; Russell, Philip B.; Pueschel, Rudolf F.; Snetsinger, Kenneth G.; Ferry, Guy V.; Livingston, John M.; Rosen, James N.; Osborn, Mary T.; Kritz, Mark A.

    1989-01-01

    The validity of particulate extinction coefficients derived from limb path solar radiance measurements obtained during the Stratospheric Aerosol and Gas Experiment (SAGE) II is tested. The SAGE II measurements are compared with correlative aerosol measurements taken during January 1985, August 1985, and July 1986 with impactors, laser spectrometers, and filter samplers on a U-2 aircraft, an upward pointing lidar on a P-3 aircraft, and balloon-borne optical particle counters. The data for July 29, 1986 are discussed in detail. The aerosol measurements taken on this day at an altitude of 20.5 km produce particulate extinction values which validate the SAGE II values for similar wavelengths.

  6. Tropospheric and Airborne Emission Spectrometers

    NASA Technical Reports Server (NTRS)

    Glavich, Thomas; Beer, Reinhard

    1996-01-01

    X This paper describes the development of two related instruments, the Tropospheric Emission Spectrometer (TES) and the Airborne Emission Spectrometer (AES). Both instruments are infrared imaging Fourier Transform Spectrometers, used for measuring the state of the lower atmosphere, and in particular the measurement of ozone and ozone sources and sinks.

  7. Smartphone spectrometer for colorimetric biosensing.

    PubMed

    Wang, Yi; Liu, Xiaohu; Chen, Peng; Tran, Nhung Thi; Zhang, Jinling; Chia, Wei Sheng; Boujday, Souhir; Liedberg, Bo

    2016-05-23

    We report on a smartphone spectrometer for colorimetric biosensing applications. The spectrometer relies on a sample cell with an integrated grating substrate, and the smartphone's built-in light-emitting diode flash and camera. The feasibility of the smartphone spectrometer is demonstrated for detection of glucose and human cardiac troponin I, the latter in conjunction with peptide-functionalized gold nanoparticles.

  8. Amino acids in Arctic aerosols

    NASA Astrophysics Data System (ADS)

    Scalabrin, E.; Zangrando, R.; Barbaro, E.; Kehrwald, N. M.; Gabrieli, J.; Barbante, C.; Gambaro, A.

    2012-11-01

    Amino acids are significant components of atmospheric aerosols, affecting organic nitrogen input to marine ecosystems, atmospheric radiation balance, and the global water cycle. The wide range of amino acid reactivities suggest that amino acids may serve as markers of atmospheric transport and deposition of particles. Despite this potential, few measurements have been conducted in remote areas to assess amino acid concentrations and potential sources. Polar regions offer a unique opportunity to investigate atmospheric processes and to conduct source apportionment studies of such compounds. In order to better understand the importance of amino acid compounds in the global atmosphere, we determined free amino acids (FAAs) in seventeen size-segregated aerosol samples collected in a polar station in the Svalbard Islands from 19 April until 14 September 2010. We used an HPLC coupled with a tandem mass spectrometer (ESI-MS/MS) to analyze 20 amino acids and quantify compounds at fmol m-3 levels. Mean total FAA concentration was 1070 fmol m-3 where serine and glycine were the most abundant compounds in almost all samples and accounted for 45-60% of the total amino acid relative abundance. The other eighteen compounds had average concentrations between 0.3 and 98 fmol m-3. The higher amino acid concentrations were present in the ultrafine aerosol fraction (< 0.49 μm) and accounted for the majority of the total amino acid content. Local marine sources dominate the boreal summer amino acid concentrations, with the exception of the regional input from Icelandic volcanic emissions.

  9. Amino acids in Arctic aerosols

    NASA Astrophysics Data System (ADS)

    Scalabrin, E.; Zangrando, R.; Barbaro, E.; Kehrwald, N. M.; Gabrieli, J.; Barbante, C.; Gambaro, A.

    2012-07-01

    Amino acids are significant components of atmospheric aerosols, affecting organic nitrogen input to marine ecosystems, atmospheric radiation balance, and the global water cycle. The wide range of amino acid reactivities suggest that amino acids may serve as markers of atmospheric transport and deposition of particles. Despite this potential, few measurements have been conducted in remote areas to assess amino acid concentrations and potential sources. Polar regions offer a unique opportunity to investigate atmospheric processes and to conduct source apportionment studies of such compounds. In order to better understand the importance of amino acid compounds in the global atmosphere, we determined free amino acids (FAAs) in seventeen size-segregated aerosol samples collected in a polar station in the Svalbard Islands from 19 April until 14 September 2010. We used an HPLC coupled with a tandem mass spectrometer (ESI-MS/MS) to analyze 20 amino acids to quantify compounds at fmol m-3 levels. Mean total FAA concentration was 1070 fmol m-3 where serine and glycine were the most abundant compounds in almost all samples and accounted for 45-60% of the total amino acid relative abundance. The other eighteen compounds had average concentrations between 0.3 and 98 fmol m-3. The higher amino acid concentrations were present in the ultrafine aerosol fraction (<0.49 μm) and accounted for the majority of the total amino acid content. Local marine sources dominate the boreal summer amino acid concentrations, with the exception of the regional input from Icelandic volcanics.

  10. FAST NEUTRON SPECTROMETER

    DOEpatents

    Davis, F.J.; Hurst, G.S.; Reinhardt, P.W.

    1959-08-18

    An improved proton recoil spectrometer for determining the energy spectrum of a fast neutron beam is described. Instead of discriminating against and thereby"throwing away" the many recoil protons other than those traveling parallel to the neutron beam axis as do conventional spectrometers, this device utilizes protons scattered over a very wide solid angle. An ovoidal gas-filled recoil chamber is coated on the inside with a scintillator. The ovoidal shape of the sensitive portion of the wall defining the chamber conforms to the envelope of the range of the proton recoils from the radiator disposed within the chamber. A photomultiplier monitors the output of the scintillator, and a counter counts the pulses caused by protons of energy just sufficient to reach the scintillator.

  11. The ALPHA Magnetic Spectrometer

    NASA Astrophysics Data System (ADS)

    Viertel, G. M.; Capell, M.

    1998-12-01

    The ALPHA Magnetic Spectrometer (AMS) will be the first large magnetic spectrometer in space. It is scheduled to be installed on the future International Space Station ALPHA (ISSA) in the year 2002 to perform measurements of the charged particle composition to answer fundamental questions in particle physics and astrophysics. Before installation on ISSA, AMS will fly on the shuttle DISCOVERY for a period of 10 days starting in May 1998. This will enable AMS to perform a test of the apparatus and first measurements. The AMS detector has five major components: A permanent NdFeB magnet, six planes of Silicon double-sided microstrip detectors, a plastic scintillator time of flight hodoscope, a plastic scintillator anticoincidence counter and an Aerogel Cherenkov threshold counter. In addition, there are electronics, support infrastructure and interfaces.

  12. Surface Plasmon Based Spectrometer

    NASA Astrophysics Data System (ADS)

    Wig, Andrew; Passian, Ali; Boudreaux, Philip; Ferrell, Tom

    2008-03-01

    A spectrometer that uses surface plasmon excitation in thin metal films to separate light into its component wavelengths is described. The use of surface plasmons as a dispersive medium sets this spectrometer apart from prism, grating, and interference based variants and allows for the miniaturization of this device. Theoretical and experimental results are presented for two different operation models. In the first case surface plasmon tunneling in the near field is used to provide transmission spectra of different broad band-pass, glass filters across the visible wavelength range with high stray-light rejection at low resolution as well as absorption spectra of chlorophyll extracted from a spinach leaf. The second model looks at the far field components of surface plasmon scattering.

  13. Galileo Ultraviolet Spectrometer experiment

    NASA Technical Reports Server (NTRS)

    Hord, C. W.; Mcclintock, W. E.; Stewart, A. I. F.; Barth, C. A.; Esposito, L. W.; Thomas, G. E.; Sandel, B. R.; Hunten, D. M.; Broadfoot, A. L.; Shemansky, D. E.

    1992-01-01

    The Galileo ultraviolet spectrometer experiment uses data obtained by the Ultraviolet Spectrometer (UVS) mounted on the pointed orbiter scan platform and from the Extreme Ultraviolet Spectrometer (EUVS) mounted on the spinning part of the orbiter with the field of view perpendicular to the spin axis. The UVS is a Ebert-Fastie design that covers the range 113-432 nm with a wavelength resolution of 0.7 nm below 190 and 1.3 nm at longer wavelengths. The UVS spatial resolution is 0.4 deg x 0.1 deg for illuminated disk observations and 1 deg x 0.1 deg for limb geometries. The EUVS is a Voyager design objective grating spectrometer, modified to cover the wavelength range from 54 to 128 nm with wavelength resolution 3.5 nm for extended sources and 1.5 nm for point sources and spatial resolution of 0.87 deg x 0.17 deg. The EUVS instrument will follow up on the many Voyager UVS discoveries, particularly the sulfur and oxygen ion emissions in the Io torus and molecular and atomic hydrogen auroral and airglow emissions from Jupiter. The UVS will obtain spectra of emission, absorption, and scattering features in the unexplored, by spacecraft, 170-432 nm wavelength region. The UVS and EUVS instruments will provide a powerful instrument complement to investigate volatile escape and surface composition of the Galilean satellites, the Io plasma torus, micro- and macro-properties of the Jupiter clouds, and the composition structure and evolution of the Jupiter upper atmosphere.

  14. Miniaturized Ion Mobility Spectrometer

    NASA Technical Reports Server (NTRS)

    Kaye, William J. (Inventor); Stimac, Robert M. (Inventor)

    2015-01-01

    By utilizing the combination of a unique electronic ion injection control circuit in conjunction with a particularly designed drift cell construction, the instantly disclosed ion mobility spectrometer achieves increased levels of sensitivity, while achieving significant reductions in size and weight. The instant IMS is of a much simpler and easy to manufacture design, rugged and hermetically sealed, capable of operation at high temperatures to at least 250.degree. C., and is uniquely sensitive, particularly to explosive chemicals.

  15. Demonstration AOTF Imaging Spectrometer

    NASA Technical Reports Server (NTRS)

    Chao, Tien-Hsin; Yu, Jeffrey; Cheng, Li-Jen

    1993-01-01

    Spectral images of high quality obtained. Acousto-optical-tunable-filter (AOTF) imaging spectrometer is optical system in which AOTF serves as spectrally dispersive element causing image on final focal plane to be shifted on plane by distance depending on wavelength of light emanating from scene. Useful in several applications involving identification, via characteristic spectras, of substances in observed scenes: examples include prospecting for minerals and detecting chemical pollutants.

  16. Sensitivity of aerosol retrieval over snow surfaces

    NASA Astrophysics Data System (ADS)

    Seidel, F. C.; Painter, T. H.

    2011-12-01

    Significant amounts of black carbon and dust aerosols are transported to and accumulated in snowpacks of mountain ranges around the globe. The direct climate forcing of these particles is increasingly understood, whereas its indirect radiative forcing due to snow albedo and snow cover changes is still under investigation. In-situ and new remote sensing techniques are used to estimate snowpack properties from local to regional scales. Nevertheless, orbital and suborbital Earth observation data are difficult to analyze due to high spatial variability of the snowpack in rugged terrain. In addition, changes in atmospheric turbidity significantly complicate the estimation of snow cover characteristics and requires prior retrieval of optical and microphysical aerosol properties. Unfortunately, most aerosol retrieval techniques work only over dark surfaces. We therefore present a study on the sensitivity of aerosol optical depth (AOD) retrieval over snow surfaces. Radiative transfer calculations show that the sensitivity to surface spectral albedo depends strongly on the aerosol single scattering albedo (ratio of scattering efficiency to total extinction efficiency). Absorbing aerosol types (e.g. soot) provide a relatively good AOD retrieval sensitivity for very bright surfaces. The findings provide a basis for the development of future techniques and algorithms, which are able to concurrently retrieve snow and aerosol properties using remote sensing data. We explore these sensitivities with synthetic data and a time series of imaging spectrometer data, in situ spectral irradiance measurements, and sunphotometer measurements of AOD in the mountains of the Upper Colorado River Basin, USA. Ultimately, this research is important to map and better understand regional influences of aerosol and climate forcings on the cryosphere and water cycle in mountainous and other cold regions.

  17. X-ray Spectrometer

    NASA Technical Reports Server (NTRS)

    Porter, F. Scott

    2004-01-01

    The X-ray Spectrometer (XRS) instrument is a revolutionary non-dispersive spectrometer that will form the basis for the Astro-E2 observatory to be launched in 2005. We have recently installed a flight spare X R S microcalorimeter spectrometer at the EBIT-I facility at LLNL replacing the XRS from the earlier Astro-E mission and providing twice the resolution. The X R S microcalorimeter is an x-ray detector that senses the heat deposited by the incident photon. It achieves a high energy resolution by operating at 0.06K and by carefully controlling the heat capacity and thermal conductance. The XRS/EBIT instrument has 32 pixels in a square geometry and achieves an energy resolution of 6 eV at 6 keV, with a bandpass from 0.1 to 12 keV (or more at higher operating temperature). The instrument allows detailed studies of the x-ray line emission of laboratory plasmas. The XRS/EBIT also provides an extensive calibration "library" for the Astro-E2 observatory.

  18. The Effects of Transpacific Transported Aerosol on Clouds in California

    NASA Astrophysics Data System (ADS)

    Suski, K.; Creamean, J.; Rosenfeld, D.; Cazorla, A.; DeMott, P. J.; Sullivan, R. C.; White, A. B.; Ralph, F. M.; Cahill, J.; Tomlinson, J. M.; Chand, D.; Schmid, B.; Prather, K. A.

    2012-12-01

    Atmospheric aerosols are frequently lofted high into the atmosphere and can travel large distances within several days. Long-range transported aerosols can have large impacts on radiative and microphysical cloud properties and can affect precipitation on both regional and global scales. Research flights were conducted out of Sacramento, California onboard the DOE G-1 aircraft during the CalWater 2011 flight campaign, which aimed to understand the effects of aerosols on clouds and precipitation in California. To investigate aerosol effects on clouds, measurements of cloud microphysical properties were coupled with an aircraft aerosol time-of-flight mass spectrometer (A-ATOFMS), which characterized the chemical composition of aerosols and cloud residues. California Central Valley pollution aerosols were hypothesized to have a large impact on orographic clouds in the California Sierra Nevada Mountains; however transpacific transported aerosols were observed in cloud residues on several flights. Our observations indicate that dust from Asia, Africa, and the Middle East initiated ice formation in upper level clouds, while Asian soot from biomass burning served as cloud condensation nuclei in clouds with large concentrations of small liquid droplets. Previous work has linked large concentrations of small droplets to suppression of orographic precipitation, while ice formation has been shown to enhance precipitation. Therefore, the overall impact of these competing effects on precipitation in the Sierra Nevada is highly uncertain. The varying impacts of long-range transported aerosols on clouds and precipitation in California are presented.

  19. RXTE Observations of Cas A

    NASA Technical Reports Server (NTRS)

    Rothschild, R. E.; Lingenfelter, R. E.; Heindl, W. A.; Blanco, P. R.; Pelling, M. R.; Gruber, D. E.; Allen, G. E.; Jahoda, K.; Swank, J. H.; Woosley, S. E.; Nomoto, K.; Higdon, J. C.; Dermer, Charles D. (Editor); Strickman, Mark S. (Editor); Kurfess, James D. (Editor)

    1997-01-01

    The exciting detection by the COMPTEL instrument of the 1157 keV Ti-44 line from the supernova remnant Cas A sets important new constraints on supernova dynamics and nucleosynthesis. The Ti-44 decay also produces x-ray lines at 68 and 78 keV, whose flux should be essentially the same as that of the gamma ray line. The revised COMPTEL flux of 4 x l0(exp -5) cm(exp -2)s(exp -1) is very near the sensitivity limit for line detection by the HEXTE instrument on RXTE. We report on the results from two RXTE observations - 20 ks during In Orbit Checkout in January 1996 and 200 ks in April 1996. We also find a strong continuum emission suggesting cosmic ray electron acceleration in the remnant.

  20. Mass spectrometers: instrumentation

    NASA Astrophysics Data System (ADS)

    Cooks, R. G.; Hoke, S. H., II; Morand, K. L.; Lammert, S. A.

    1992-09-01

    Developments in mass spectrometry instrumentation over the past three years are reviewed. The subject is characterized by an enormous diversity of designs, a high degree of competition between different laboratories working with either different or similar techniques and by extremely rapid progress in improving analytical performance. Instruments can be grouped into genealogical charts based on their physical and conceptual interrelationships. This is illustrated using mass analyzers of different types. The time course of development of particular instrumental concepts is illustrated in terms of the s-curves typical of cell growth. Examples are given of instruments which are at the exponential, linear and mature growth stages. The prime examples used are respectively: (i) hybrid instruments designed to study reactive collisions of ions with surfaces: (ii) the Paul ion trap; and (iii) the triple quadrupole mass spectrometer. In the area of ion/surface collisions, reactive collisions such as hydrogen radical abstraction from the surface by the impinging ion are studied. They are shown to depend upon the chemical nature of the surface through the use of experiments which utilize self-assembled monolayers as surfaces. The internal energy deposited during surface-induced dissociation upon collision with different surfaces in a BEEQ instrument is also discussed. Attention is also given to a second area of emerging instrumentation, namely technology which allows mass spectrometers to be used for on-line monitoring of fluid streams. A summary of recent improvements in the performance of the rapidly developing quadrupole ion trap instrument illustrates this stage of instrument development. Improvements in resolution and mass range and their application to the characterization of biomolecules are described. The interaction of theory with experiment is illustrated through the role of simulations of ion motion in the ion trap. It is emphasized that mature instruments play a

  1. LASER DESORPTION IONIZATION OF ULTRAFINE AEROSOL PARTICLES. (R823980)

    EPA Science Inventory

    On-line analysis of ultrafine aerosol particle in the 12 to 150 nm size range is performed by
    laser desorption/ionization. Particles are size selected with a differential mobility analyzer and then
    sent into a linear time-of-flight mass spectrometer where they are ablated w...

  2. Development and Characterization of a Thermodenuder for Aerosol Volatility Measurements

    SciTech Connect

    Dr. Timothy Onasch

    2009-09-09

    This SBIR Phase I project addressed the critical need for improved characterization of carbonaceous aerosol species in the atmosphere. The proposed work focused on the development of a thermodenuder (TD) system capable of systematically measuring volatility profiles of primary and secondary organic aerosol species and providing insight into the effects of absorbing and nonabsorbing organic coatings on particle absorption properties. This work provided the fundamental framework for the generation of essential information needed for improved predictions of ambient aerosol loadings and radiative properties by atmospheric chemistry models. As part of this work, Aerodyne Research, Inc. (ARI) continued to develop and test, with the final objective of commercialization, an improved thermodenuder system that can be used in series with any aerosol instrument or suite of instruments (e.g., aerosol mass spectrometers-AMS, scanning mobility particle sizers-SMPS, photoacoustic absorption spectrometers-PAS, etc.) to obtain aerosol chemical, physical, and optical properties as a function of particle volatility. In particular, we provided the proof of concept for the direct coupling of our improved TD design with a full microphysical model to obtain volatility profiles for different organic aerosol components and to allow for meaningful comparisons between different TD-derived aerosol measurements. In a TD, particles are passed through a heated zone and a denuding (activated charcoal) zone to remove semi-volatile material. Changes in particle size, number concentration, optical absorption, and chemical composition are subsequently detected with aerosol instrumentation. The aerosol volatility profiles provided by the TD will strengthen organic aerosol emission inventories, provide further insight into secondary aerosol formation mechanisms, and provide an important measure of particle absorption (including brown carbon contributions and identification, and absorption enhancements

  3. Synergic use of TOMS and Aeronet Observations for Characterization of Aerosol Absorption

    NASA Technical Reports Server (NTRS)

    Torres, O.; Bhartia, P. K.; Dubovik, O.; Holben, B.; Siniuk, A.

    2003-01-01

    The role of aerosol absorption on the radiative transfer balance of the earth-atmosphere system is one of the largest sources of uncertainty in the analysis of global climate change. Global measurements of aerosol single scattering albedo are, therefore, necessary to properly assess the radiative forcing effect of aerosols. Remote sensing of aerosol absorption is currently carried out using both ground (Aerosol Robotic Network) and space (Total Ozone Mapping Spectrometer) based observations. The satellite technique uses measurements of backscattered near ultraviolet radiation. Carbonaceous aerosols, resulting from the combustion of biomass, are one of the most predominant absorbing aerosol types in the atmosphere. In this presentation, TOMS and AERONET retrievals of single scattering albedo of carbonaceous aerosols, are compared for different environmental conditions: agriculture related biomass burning in South America and Africa and peat fires in Eastern Europe. The AERONET and TOMS derived aerosol absorption information are in good quantitative agreement. The most absorbing smoke is detected over the African Savanna. Aerosol absorption over the Brazilian rain forest is less absorbing. Absorption by aerosol particles resulting from peat fires in Eastern Europe is weaker than the absorption measured in Africa and South America. This analysis shows that the near UV satellite method of aerosol absorption characterization has the sensitivity to distinguish different levels of aerosol absorption. The analysis of the combined AERONET-TOMS observations shows a high degree of synergy between satellite and ground based observations.

  4. Nucleosomes Inhibit Cas9 Endonuclease Activity in Vitro.

    PubMed

    Hinz, John M; Laughery, Marian F; Wyrick, John J

    2015-12-08

    During Cas9 genome editing in eukaryotic cells, the bacterial Cas9 enzyme cleaves DNA targets within chromatin. To understand how chromatin affects Cas9 targeting, we characterized Cas9 activity on nucleosome substrates in vitro. We find that Cas9 endonuclease activity is strongly inhibited when its target site is located within the nucleosome core. In contrast, the nucleosome structure does not affect Cas9 activity at a target site within the adjacent linker DNA. Analysis of target sites that partially overlap with the nucleosome edge indicates that the accessibility of the protospacer-adjacent motif (PAM) is the critical determinant of Cas9 activity on a nucleosome.

  5. Size and concentration measurement of an industrial aerosol

    SciTech Connect

    O'Brien, D.; Baron, P.; Willeke, K.

    1986-07-01

    Several real-time particle sizing instruments were evaluated for measuring the size distribution and concentration of the aerosol produced during the high speed grinding of gray iron castings. Aerosol was sampled in the airstream entrained by the motion of a spinning grinding wheel in a pilot grinding operation. Measurement methods based on differing physical principles were selected for evaluation and compared: particle inertia (aerodynamic particle sizer and quartz crystal microbalance cascade impactor); light scattering (laser aerosol spectrometer); and projected-area microscopy (scanning electron microscope). Inferences of aerodynamic diameter based on measurements by the laser aerosol spectrometer consistently undersized that determined by the aerodynamic particle sizer by a factor of 1.5. Estimates of aerodynamic diameters from projected area diameters determined by scanning electron microscopy differed from those obtained by the aerodynamic particle sizer by a factor of 2. Differences appeared to be a non-linear function of particle diameter. Estimates of respirable mass determined from mass-weighted particle size spectra varied by a factor of 6 between the largest estimate (scanning electron microscope) and the smallest estimate (laser aerosol spectrometer).

  6. Size and concentration measurement of an industrial aerosol.

    PubMed

    O'Brien, D; Baron, P; Willeke, K

    1986-07-01

    Several real-time particle sizing instruments were evaluated for measuring the size distribution and concentration of the aerosol produced during the high speed grinding of gray iron castings. Aerosol was sampled in the airstream entrained by the motion of a spinning grinding wheel in a pilot grinding operation. Measurement methods based on differing physical principles were selected for evaluation and compared: particle inertia (aerodynamic particle sizer and quartz crystal microbalance cascade impactor); light scattering (laser aerosol spectrometer); and projected-area microscopy (scanning electron microscope). Inferences of aerodynamic diameter based on measurements by the laser aerosol spectrometer consistently undersized that determined by the aerodynamic particle sizer by a factor of 1.5. Estimates of aerodynamic diameters from projected area diameters determined by scanning electron microscopy differed from those obtained by the aerodynamic particle sizer by a factor of 2. Differences appeared to be a non-linear function of particle diameter. Estimates of respirable mass determined from mass-weighted particle size spectra varied by a factor of 6 between the largest estimate (scanning electron microscope) and the smallest estimate (laser aerosol spectrometer).

  7. Global Atmospheric Aerosol Modeling

    NASA Technical Reports Server (NTRS)

    Hendricks, Johannes; Aquila, Valentina; Righi, Mattia

    2012-01-01

    Global aerosol models are used to study the distribution and properties of atmospheric aerosol particles as well as their effects on clouds, atmospheric chemistry, radiation, and climate. The present article provides an overview of the basic concepts of global atmospheric aerosol modeling and shows some examples from a global aerosol simulation. Particular emphasis is placed on the simulation of aerosol particles and their effects within global climate models.

  8. A newly discovered Bordetella species carries a transcriptionally active CRISPR-Cas with a small Cas9 endonuclease

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The Cas9 endonuclease of the Type II-a clustered regularly interspersed short palindromic repeats (CRISPR), of Streptococcus pyogenes (SpCas9) has been adapted as a widely used tool for genome editing and genome engineering. Herein, we describe a gene encoding a novel Cas9 ortholog (BpsuCas9) and th...

  9. Cas9 specifies functional viral targets during CRISPR-Cas adaptation.

    PubMed

    Heler, Robert; Samai, Poulami; Modell, Joshua W; Weiner, Catherine; Goldberg, Gregory W; Bikard, David; Marraffini, Luciano A

    2015-03-12

    Clustered regularly interspaced short palindromic repeat (CRISPR) loci and their associated (Cas) proteins provide adaptive immunity against viral infection in prokaryotes. Upon infection, short phage sequences known as spacers integrate between CRISPR repeats and are transcribed into small RNA molecules that guide the Cas9 nuclease to the viral targets (protospacers). Streptococcus pyogenes Cas9 cleavage of the viral genome requires the presence of a 5'-NGG-3' protospacer adjacent motif (PAM) sequence immediately downstream of the viral target. It is not known whether and how viral sequences flanked by the correct PAM are chosen as new spacers. Here we show that Cas9 selects functional spacers by recognizing their PAM during spacer acquisition. The replacement of cas9 with alleles that lack the PAM recognition motif or recognize an NGGNG PAM eliminated or changed PAM specificity during spacer acquisition, respectively. Cas9 associates with other proteins of the acquisition machinery (Cas1, Cas2 and Csn2), presumably to provide PAM-specificity to this process. These results establish a new function for Cas9 in the genesis of prokaryotic immunological memory.

  10. A COMPARISON OF PARTICLE MASS SPECTROMETERS DURING THE 1999 ATLANTA SUPERSITES EXPERIMENT

    EPA Science Inventory

    During the Atlanta SuperSite Experiment, four particle mass spectrometers were operated together for the first time: NOAA's PALMS (Particle Analysis by Laser Mass Spectrometry), U. C. Riverside's ATOFMS (Aerosol Time-of-Flight Mass Spectrometry), U. Delaware's RSMS-II (Rapid Si...

  11. Does the Madden-Julian Oscillation Influence Aerosol Variability?

    NASA Astrophysics Data System (ADS)

    Tian, B.; Waliser, D. E.; Kahn, R. A.; Li, Q.; Yung, Y. L.; Tyranowski, T.; Geogdzhayev, I. V.; Mishchenko, M. I.; Torres, O.; Smirnov, A.

    2007-12-01

    We investigate the modulation of aerosols by the Madden-Julian Oscillation (MJO) using satellite-based global aerosol products, including aerosol index (AI) from the Total Ozone Mapping Spectrometer (TOMS) on Nimbus-7, and aerosol optical thickness (AOT) from the Moderate Resolution Imaging Spectroradiometer (MODIS) on Terra and Aqua and the Advanced Very High Resolution Radiometer (AVHRR) on NOAA satellites. A composite analysis is performed for boreal winter, and the global pentad rainfall data from the NOAA Climate Prediction Center (CPC) Merged Analysis of Precipitation (CMAP) are used to identify MJO events. The MJO composites exhibit large variations in the TOMS AI and MODIS/AVHRR AOT over the equatorial Indian and western Pacific Oceans where MJO convection is active, as well as the tropical Africa and Atlantic Ocean where MJO convection is relatively weak but the background aerosol level is relatively high. A strong inverse linear relationship between the TOMS AI and rainfall anomalies, but a weaker, less coherent positive correlation between the MODIS/AVHRR AOT and rainfall anomalies, were found. The Aerosol Robotic Network AOT pattern at Kaashidoo (73.5°E, 4.9°N) and Nauru (167°E, 0.5°S) is more consistent with MODIS and AVHRR. These results indicate a connection between the MJO, its associated rainfall and circulation variability, and the observed aerosol variations. Several physical and non-physical factors that may contribute to the observed aerosol-rainfall relationship, such as aerosol humidification effect, wet deposition, surface wind speed, phytoplankton, different sensor sensitivities (absorbing versus non-absorbing aerosols and upper versus lower tropospheric aerosols), sampling issue, and cloud contamination, are discussed. However, a clear causal explanation for the observed patterns remains elusive. Further investigation is needed to unravel this complex aerosol-rainfall relationship.

  12. Aerosol Absorption Measurements in MILAGRO.

    NASA Astrophysics Data System (ADS)

    Gaffney, J. S.; Marley, N. A.; Arnott, W. P.; Paredes-Miranda, L.; Barnard, J. C.

    2007-12-01

    During the month of March 2006, a number of instruments were used to determine the absorption characteristics of aerosols found in the Mexico City Megacity and nearby Valley of Mexico. These measurements were taken as part of the Department of Energy's Megacity Aerosol Experiment - Mexico City (MAX-Mex) that was carried out in collaboration with the Megacity Interactions: Local and Global Research Observations (MILAGRO) campaign. MILAGRO was a joint effort between the DOE, NSF, NASA, and Mexican agencies aimed at understanding the impacts of a megacity on the urban and regional scale. A super-site was operated at the Instituto Mexicano de Petroleo in Mexico City (designated T-0) and at the Universidad Technologica de Tecamac (designated T-1) that was located about 35 km to the north east of the T-0 site in the State of Mexico. A third site was located at a private rancho in the State of Hidalgo approximately another 35 km to the northeast (designated T-2). Aerosol absorption measurements were taken in real time using a number of instruments at the T-0 and T-1 sites. These included a seven wavelength aethalometer, a multi-angle absorption photometer (MAAP), and a photo-acoustic spectrometer. Aerosol absorption was also derived from spectral radiometers including a multi-filter rotating band spectral radiometer (MFRSR). The results clearly indicate that there is significant aerosol absorption by the aerosols in the Mexico City megacity region. The absorption can lead to single scattering albedo reduction leading to values below 0.5 under some circumstances. The absorption is also found to deviate from that expected for a "well-behaved" soot anticipated from diesel engine emissions, i.e. from a simple 1/lambda wavelength dependence for absorption. Indeed, enhanced absorption is seen in the region of 300-450 nm in many cases, particularly in the afternoon periods indicating that secondary organic aerosols are contributing to the aerosol absorption. This is likely due

  13. Airborne measurements of biomass burning aerosol distribution and composition in the springtime Arctic 2008

    NASA Astrophysics Data System (ADS)

    Thornberry, T.; Froyd, K. D.; Murphy, D. M.; Thomson, D. S.; Brock, C. A.; Cozic, J.; Warneke, C.; Degouw, J.; Middlebrook, A. M.; Bahreini, R.; Brioude, J.

    2008-12-01

    The springtime Arctic troposphere in 2008 was characterized by high concentrations of biomass burning aerosol. During the Aerosol, Radiation, and Cloud Processes affecting Arctic Climate (ARCPAC) campaign, airborne measurements of aerosol composition by the NOAA single particle mass spectrometer instrument (PALMS) identified biomass burning particles using an established composition tracer. Fires in northern Asia produced biomass burning aerosol that were transported to the Arctic within 3-12 days. Concentrations of biomass burning aerosols were elevated not only within well defined plumes, but also regionally throughout the Arctic. Above the boundary layer, biomass burning particles dominated the total aerosol volume and were largely responsible for the Arctic Haze observed during the period of study. The composition of plume aerosols varied according to source region, transport time, and anthropogenic influence.

  14. Aerosol gels

    NASA Technical Reports Server (NTRS)

    Sorensen, Christopher M. (Inventor); Chakrabarti, Amitabha (Inventor); Dhaubhadel, Rajan (Inventor); Gerving, Corey (Inventor)

    2010-01-01

    An improved process for the production of ultralow density, high specific surface area gel products is provided which comprises providing, in an enclosed chamber, a mixture made up of small particles of material suspended in gas; the particles are then caused to aggregate in the chamber to form ramified fractal aggregate gels. The particles should have a radius (a) of up to about 50 nm and the aerosol should have a volume fraction (f.sub.v) of at least 10.sup.-4. In preferred practice, the mixture is created by a spark-induced explosion of a precursor material (e.g., a hydrocarbon) and oxygen within the chamber. New compositions of matter are disclosed having densities below 3.0 mg/cc.

  15. Phylogeny of Cas9 determines functional exchangeability of dual-RNA and Cas9 among orthologous type II CRISPR-Cas systems

    PubMed Central

    Fonfara, Ines; Le Rhun, Anaïs; Chylinski, Krzysztof; Makarova, Kira S.; Lécrivain, Anne-Laure; Bzdrenga, Janek; Koonin, Eugene V.; Charpentier, Emmanuelle

    2014-01-01

    The CRISPR-Cas-derived RNA-guided Cas9 endonuclease is the key element of an emerging promising technology for genome engineering in a broad range of cells and organisms. The DNA-targeting mechanism of the type II CRISPR-Cas system involves maturation of tracrRNA:crRNA duplex (dual-RNA), which directs Cas9 to cleave invading DNA in a sequence-specific manner, dependent on the presence of a Protospacer Adjacent Motif (PAM) on the target. We show that evolution of dual-RNA and Cas9 in bacteria produced remarkable sequence diversity. We selected eight representatives of phylogenetically defined type II CRISPR-Cas groups to analyze possible coevolution of Cas9 and dual-RNA. We demonstrate that these two components are interchangeable only between closely related type II systems when the PAM sequence is adjusted to the investigated Cas9 protein. Comparison of the taxonomy of bacterial species that harbor type II CRISPR-Cas systems with the Cas9 phylogeny corroborates horizontal transfer of the CRISPR-Cas loci. The reported collection of dual-RNA:Cas9 with associated PAMs expands the possibilities for multiplex genome editing and could provide means to improve the specificity of the RNA-programmable Cas9 tool. PMID:24270795

  16. The GRANIT spectrometer

    SciTech Connect

    Baessler, Stefan; Beau, M; Kreuz, Michael; Nesvizhevsky, V.; Kurlov, V; Pignol, G; Protasov, K.; Vezzu, Francis; Voronin, Vladimir

    2011-01-01

    The existence of quantum states of matter in a gravitational field was demonstrated recently in the Institut Laue-Langevin (ILL), Grenoble, in a series of experiments with ultra cold neutrons (UCN). UCN in low quantum states is an excellent probe for fundamental physics, in particular for constraining extra short-range forces; as well as a tool in quantum optics and surface physics. The GRANIT is a follow-up project based on a second-generation spectrometer with ultra-high energy resolution, permanently installed in ILL. It has been constructed in framework of an ANR grant; and will become operational in 2011.

  17. Modular total absorption spectrometer

    NASA Astrophysics Data System (ADS)

    Karny, M.; Rykaczewski, K. P.; Fijałkowska, A.; Rasco, B. C.; Wolińska-Cichocka, M.; Grzywacz, R. K.; Goetz, K. C.; Miller, D.; Zganjar, E. F.

    2016-11-01

    The design and performance of the Modular Total Absorption Spectrometer built and commissioned at the Oak Ridge National Laboratory is presented. The active volume of the detector is approximately one ton of NaI(Tl), which results in very high full γ energy peak efficiency of 71% at 6 MeV and nearly flat efficiency of around 81.5% for low energy γ-rays between 300 keV and 1 MeV. In addition to the high peak efficiency, the modular construction of the detector permits the use of a γ-coincidence technique in data analysis as well as β-delayed neutron observation.

  18. Cassini Plasma Spectrometer Investigation

    NASA Astrophysics Data System (ADS)

    Young, D. T.; Berthelier, J. J.; Blanc, M.; Burch, J. L.; Coates, A. J.; Goldstein, R.; Grande, M.; Hill, T. W.; Johnson, R. E.; Kelha, V.; McComas, D. J.; Sittler, E. C.; Svenes, K. R.; Szegö, K.; Tanskanen, P.; Ahola, K.; Anderson, D.; Bakshi, S.; Baragiola, R. A.; Barraclough, B. L.; Black, R. K.; Bolton, S.; Booker, T.; Bowman, R.; Casey, P.; Crary, F. J.; Delapp, D.; Dirks, G.; Eaker, N.; Funsten, H.; Furman, J. D.; Gosling, J. T.; Hannula, H.; Holmlund, C.; Huomo, H.; Illiano, J. M.; Jensen, P.; Johnson, M. A.; Linder, D. R.; Luntama, T.; Maurice, S.; McCabe, K. P.; Mursula, K.; Narheim, B. T.; Nordholt, J. E.; Preece, A.; Rudzki, J.; Ruitberg, A.; Smith, K.; Szalai, S.; Thomsen, M. F.; Viherkanto, K.; Vilppola, J.; Vollmer, T.; Wahl, T. E.; Wüest, M.; Ylikorpi, T.; Zinsmeyer, C.

    2004-09-01

    The Cassini Plasma Spectrometer (CAPS) will make comprehensive three-dimensional mass-resolved measurements of the full variety of plasma phenomena found in Saturn’s magnetosphere. Our fundamental scientific goals are to understand the nature of saturnian plasmas primarily their sources of ionization, and the means by which they are accelerated, transported, and lost. In so doing the CAPS investigation will contribute to understanding Saturn’s magnetosphere and its complex interactions with Titan, the icy satellites and rings, Saturn’s ionosphere and aurora, and the solar wind. Our design approach meets these goals by emphasizing two complementary types of measurements: high-time resolution velocity distributions of electrons and all major ion species; and lower-time resolution, high-mass resolution spectra of all ion species. The CAPS instrument is made up of three sensors: the Electron Spectrometer (ELS), the Ion Beam Spectrometer (IBS), and the Ion Mass Spectrometer (IMS). The ELS measures the velocity distribution of electrons from 0.6 eV to 28,250 keV, a range that permits coverage of thermal electrons found at Titan and near the ring plane as well as more energetic trapped electrons and auroral particles. The IBS measures ion velocity distributions with very high angular and energy resolution from 1 eV to 49,800 keV. It is specially designed to measure sharply defined ion beams expected in the solar wind at 9.5 AU, highly directional rammed ion fluxes encountered in Titan’s ionosphere, and anticipated field-aligned auroral fluxes. The IMS is designed to measure the composition of hot, diffuse magnetospheric plasmas and low-concentration ion species 1 eV to 50,280 eV with an atomic resolution M/ΔM ˜70 and, for certain molecules, (such asN 2 + and CO+), effective resolution as high as ˜2500. The three sensors are mounted on a motor-driven actuator that rotates the entire instrument over approximately one-half of the sky every 3 min.

  19. Gas Chromatic Mass Spectrometer

    NASA Technical Reports Server (NTRS)

    Wey, Chowen

    1995-01-01

    Gas chromatograph/mass spectrometer (GC/MS) used to measure and identify combustion species present in trace concentration. Advanced extractive diagnostic method measures to parts per billion (PPB), as well as differentiates between different types of hydrocarbons. Applicable for petrochemical, waste incinerator, diesel transporation, and electric utility companies in accurately monitoring types of hydrocarbon emissions generated by fuel combustion, in order to meet stricter environmental requirements. Other potential applications include manufacturing processes requiring precise detection of toxic gaseous chemicals, biomedical applications requiring precise identification of accumulative gaseous species, and gas utility operations requiring high-sensitivity leak detection.

  20. Characterizing the Hygroscopicity of Nascent Sea Spray Aerosol from Synthetic Blooms

    NASA Astrophysics Data System (ADS)

    Forestieri, S.; Cappa, C. D.; Sultana, C. M.; Lee, C.; Wang, X.; Helgestad, T.; Moore, K.; Prather, K. A.; Cornwell, G.; Novak, G.; Bertram, T. H.

    2015-12-01

    Marine sea spray aerosol (SSA) particles make up a significant portion of natural aerosols and are therefore important in establishing the baseline for anthropogenic aerosol climate impacts. Scattering of solar radiation by aerosols affects Earth's radiative budget and the degree of scattering is size-dependent. Thus, aerosols scatter more light at elevated relative humidities when they grow larger via water uptake. This growth depends critically on chemical composition. SSA can become enriched in organics during phytoplankton blooms, becoming less salty and therefore less hygroscopic. Subsaturated hygroscopic growth factors at 85% relative humidity (GF(85%)) of SSA particles were quantified during two mesocosm experiments in enclosed marine aerosol reference tanks (MARTs). The two experiments were conducted with filtered seawater collected at separate times from the Scripps Institute of Oceanography Pier in La Jolla, CA. Phytoplankton blooms in each tank were induced via the addition of nutrients and photosynthetically active radiation. The "indoor" MART was illuminated with fluorescent light and the other "outdoor" MART was illuminated with sunlight. The peak chlorophyll-a concentrations were 59 micrograms/L and 341 micrograms /L for the indoor and outdoor MARTs, respectively. GF(85%) values for SSA particles were quantified using a humidified cavity ringdown spectrometer and particle size distributions. Particle composition was monitored with a single particle aerosol mass spectrometer (ATOFMS) and an Aerodyne aerosol mass spectrometer (AMS). Relationships between the observed particle GFs and the particle composition markers will be discussed.

  1. Highly efficient Cas9-mediated transcriptional programming.

    PubMed

    Chavez, Alejandro; Scheiman, Jonathan; Vora, Suhani; Pruitt, Benjamin W; Tuttle, Marcelle; P R Iyer, Eswar; Lin, Shuailiang; Kiani, Samira; Guzman, Christopher D; Wiegand, Daniel J; Ter-Ovanesyan, Dmitry; Braff, Jonathan L; Davidsohn, Noah; Housden, Benjamin E; Perrimon, Norbert; Weiss, Ron; Aach, John; Collins, James J; Church, George M

    2015-04-01

    The RNA-guided nuclease Cas9 can be reengineered as a programmable transcription factor. However, modest levels of gene activation have limited potential applications. We describe an improved transcriptional regulator obtained through the rational design of a tripartite activator, VP64-p65-Rta (VPR), fused to nuclease-null Cas9. We demonstrate its utility in activating endogenous coding and noncoding genes, targeting several genes simultaneously and stimulating neuronal differentiation of human induced pluripotent stem cells (iPSCs).

  2. Black carbon in aerosol during BIBLE B

    NASA Astrophysics Data System (ADS)

    Liley, J. Ben; Baumgardner, D.; Kondo, Y.; Kita, K.; Blake, D. R.; Koike, M.; Machida, T.; Takegawa, N.; Kawakami, S.; Shirai, T.; Ogawa, T.

    2003-02-01

    The Biomass Burning and Lightning Experiment (BIBLE) A and B campaigns over the tropical western Pacific during springtime deployed a Gulfstream-II aircraft with systems to measure ozone and numerous precursor species. Aerosol measuring systems included a MASP optical particle counter, a condensation nucleus (CN) counter, and an absorption spectrometer for black carbon. Aerosol volume was very low in the middle and upper troposphere during both campaigns, and during BIBLE A, there was little aerosol enhancement in the boundary layer away from urban areas. In BIBLE B, there was marked aerosol enhancement in the lowest 3 km of the atmosphere. Mixing ratios of CN in cloud-free conditions in the upper troposphere were in general higher than in the boundary layer, indicating new particle formation from gaseous precursors. High concentrations of black carbon were observed during BIBLE B, with mass loadings up to 40 μg m-3 representing as much as one quarter of total aerosol mass. Strong correlations with hydrocarbon enhancement allow the determination of a black carbon emission ratio for the fires at that time. Expressed as elemental carbon, it is about 0.5% of carbon dioxide and 6% of carbon monoxide emissions from the same fires, comparable to methane production, and greater than that of other hydrocarbons.

  3. Black carbon in aerosol during BIBLE B

    NASA Astrophysics Data System (ADS)

    Liley, J. Ben; Baumgardner, D.; Kondo, Y.; Kita, K.; Blake, D. R.; Koike, M.; Machida, T.; Takegawa, N.; Kawakami, S.; Shirai, T.; Ogawa, T.

    2002-02-01

    The Biomass Burning and Lightning Experiment (BIBLE) A and B campaigns over the tropical western Pacific during springtime deployed a Gulfstream-II aircraft with systems to measure ozone and numerous precursor species. Aerosol measuring systems included a MASP optical particle counter, a condensation nucleus (CN) counter, and an absorption spectrometer for black carbon. Aerosol volume was very low in the middle and upper troposphere during both campaigns, and during BIBLE A, there was little aerosol enhancement in the boundary layer away from urban areas. In BIBLE B, there was marked aerosol enhancement in the lowest 3 km of the atmosphere. Mixing ratios of CN in cloud-free conditions in the upper troposphere were in general higher than in the boundary layer, indicating new particle formation from gaseous precursors. High concentrations of black carbon were observed during BIBLE B, with mass loadings up to 40 μg m-3 representing as much as one quarter of total aerosol mass. Strong correlations with hydrocarbon enhancement allow the determination of a black carbon emission ratio for the fires at that time. Expressed as elemental carbon, it is about 0.5% of carbon dioxide and 6% of carbon monoxide emissions from the same fires, comparable to methane production, and greater than that of other hydrocarbons.

  4. Intercomparison of aerosol instruments: number concentration

    SciTech Connect

    Knutson, E O; Sinclair, D; Tu, K W; Hinchliffe, L; Franklin, H

    1982-05-01

    An intercomparison of aerosol instruments conducted February 23-27, 1981, at the Environmental Measurements Laboratory (EML) focused on five instruments: the Pollak and TSI condensation nucleus counters; the Active Scattering Aerosol Spectrometer (ASAS-X); and two aerosol electrometers. Test aerosols of sodium chloride and ammonium fluorescein generated by nebulization/electrostatic classification were used to obtain 195 lines of comparison data. Concentrations measured by the ASAS-X and the TSI aerosol electrometer averaged respectively 1.388 and 1.581 times that measured by the Pollak. These ratios were very stable during the week and there was little effect of particle size or material. Most other comparisons were equally stable. However, a review of past work at EML and elsewhere led to the disturbing conclusion that these ratios may change from year to year, or from season to season. A filter sample was taken from microscopy, concurrent with readings from the ASAS-X and the TSI condensation nucleus counters. In this sample, the two instruments differed by 20%. Within its 20% uncertainty, the filter result matched both the TSI and ASAS-X readings.

  5. CRISPR-Cas: biology, mechanisms and relevance

    PubMed Central

    Hille, Frank

    2016-01-01

    Prokaryotes have evolved several defence mechanisms to protect themselves from viral predators. Clustered regularly interspaced short palindromic repeats (CRISPR) and their associated proteins (Cas) display a prokaryotic adaptive immune system that memorizes previous infections by integrating short sequences of invading genomes—termed spacers—into the CRISPR locus. The spacers interspaced with repeats are expressed as small guide CRISPR RNAs (crRNAs) that are employed by Cas proteins to target invaders sequence-specifically upon a reoccurring infection. The ability of the minimal CRISPR-Cas9 system to target DNA sequences using programmable RNAs has opened new avenues in genome editing in a broad range of cells and organisms with high potential in therapeutical applications. While numerous scientific studies have shed light on the biochemical processes behind CRISPR-Cas systems, several aspects of the immunity steps, however, still lack sufficient understanding. This review summarizes major discoveries in the CRISPR-Cas field, discusses the role of CRISPR-Cas in prokaryotic immunity and other physiological properties, and describes applications of the system as a DNA editing technology and antimicrobial agent. This article is part of the themed issue ‘The new bacteriology’. PMID:27672148

  6. Measurements of the aerosol chemical composition and mixing state in the Po Valley using multiple spectroscopic techniques

    NASA Astrophysics Data System (ADS)

    Decesari, S.; Allan, J.; Plass-Duelmer, C.; Williams, B. J.; Paglione, M.; Facchini, M. C.; O'Dowd, C.; Harrison, R. M.; Gietl, J. K.; Coe, H.; Giulianelli, L.; Gobbi, G. P.; Lanconelli, C.; Carbone, C.; Worsnop, D.; Lambe, A. T.; Ahern, A. T.; Moretti, F.; Tagliavini, E.; Elste, T.; Gilge, S.; Zhang, Y.; Dall'Osto, M.

    2014-11-01

    The use of co-located multiple spectroscopic techniques can provide detailed information on the atmospheric processes regulating aerosol chemical composition and mixing state. So far, field campaigns heavily equipped with aerosol mass spectrometers have been carried out mainly in large conurbations and in areas directly affected by their outflow, whereas lesser efforts have been dedicated to continental areas characterised by a less dense urbanisation. We present here the results obtained at a background site in the Po Valley, Italy, in summer 2009. For the first time in Europe, six state-of-the-art spectrometric techniques were used in parallel: aerosol time-of-flight mass spectrometer (ATOFMS), two aerosol mass spectrometers (high-resolution time-of-flight aerosol mass spectrometer - HR-ToF-AMS and soot particle aerosol mass spectrometer - SP-AMS), thermal desorption aerosol gas chromatography (TAG), chemical ionisation mass spectrometry (CIMS) and (offline) proton nuclear magnetic resonance (1H-NMR) spectroscopy. The results indicate that, under high-pressure conditions, atmospheric stratification at night and early morning hours led to the accumulation of aerosols produced by anthropogenic sources distributed over the Po Valley plain. Such aerosols include primary components such as black carbon (BC), secondary semivolatile compounds such as ammonium nitrate and amines and a class of monocarboxylic acids which correspond to the AMS cooking organic aerosol (COA) already identified in urban areas. In daytime, the entrainment of aged air masses in the mixing layer is responsible for the accumulation of low-volatility oxygenated organic aerosol (LV-OOA) and also for the recycling of non-volatile primary species such as black carbon. According to organic aerosol source apportionment, anthropogenic aerosols accumulating in the lower layers overnight accounted for 38% of organic aerosol mass on average, another 21% was accounted for by aerosols recirculated in

  7. Organic Aerosols from SÃO Paulo and its Relationship with Aerosol Absorption and Scattering Properties

    NASA Astrophysics Data System (ADS)

    Artaxo, P.; Brito, J. F.; Rizzo, L. V.

    2012-12-01

    The megacity of São Paulo with its 19 million people and 7 million cars is a challenge from the point of view of air pollution. High levels of organic aerosols, PM10, black carbon and ozone and the peculiar situation of the large scale use of ethanol fuel makes it a special case. Little is known about the impact of ethanol on air quality and human health and the increase of ethanol as vehicle fuel is rising worldwide An experiment was designed to physico-chemical properties of aerosols in São Paulo, as well as their optical properties. Aerosol size distribution in the size range of 1nm to 10 micrometers is being measured with a Helsinki University SMPS (Scanning Mobility Particle Sizer), an NAIS (Neutral ion Spectrometer) and a GRIMM OPC (Optical Particle Counter). Optical properties are being measured with a TSI Nephelometer and a Thermo MAAP (Multi Angle Absorption Photometer). A CIMEL sunphotometer from the AERONET network measure the aerosol optical depth. Furthermore, a Proton-Transfer-Reaction Mass Spectrometer (PTR-MS) and an Aerosol Chemical Speciation Monitor (ACSM) are used to real-time VOC analysis and aerosol composition, respectively. The ACSM was operated for 3 months continuosly during teh wintertime of 2012. The measured total particle concentration typically varies between 10,000 and 30,000 cm-3 being the lowest late in the night and highest around noon and frequently exceeding 50,000 cm-3. Clear diurnal patterns in aerosol optical properties were observed. Scattering and absorption coefficients typically range between 20 and 100 Mm-1 at 450 nm, and between 10 to 40 Mm-1 at 637 nm, respectively, both of them peaking at 7:00 local time, the morning rush hour. The corresponding single scattering albedo varies between 0.50 and 0.85, indicating a significant contribution of primary absorbing particles to the aerosol population. During the first month a total of seven new particle formation events were observed with growth rates ranging from 9 to 25

  8. Aerosol typing - key information from aerosol studies

    NASA Astrophysics Data System (ADS)

    Mona, Lucia; Kahn, Ralph; Papagiannopoulos, Nikolaos; Holzer-Popp, Thomas; Pappalardo, Gelsomina

    2016-04-01

    Aerosol typing is a key source of aerosol information from ground-based and satellite-borne instruments. Depending on the specific measurement technique, aerosol typing can be used as input for retrievals or represents an output for other applications. Typically aerosol retrievals require some a priori or external aerosol type information. The accuracy of the derived aerosol products strongly depends on the reliability of these assumptions. Different sensors can make use of different aerosol type inputs. A critical review and harmonization of these procedures could significantly reduce related uncertainties. On the other hand, satellite measurements in recent years are providing valuable information about the global distribution of aerosol types, showing for example the main source regions and typical transport paths. Climatological studies of aerosol load at global and regional scales often rely on inferred aerosol type. There is still a high degree of inhomogeneity among satellite aerosol typing schemes, which makes the use different sensor datasets in a consistent way difficult. Knowledge of the 4d aerosol type distribution at these scales is essential for understanding the impact of different aerosol sources on climate, precipitation and air quality. All this information is needed for planning upcoming aerosol emissions policies. The exchange of expertise and the communication among satellite and ground-based measurement communities is fundamental for improving long-term dataset consistency, and for reducing aerosol type distribution uncertainties. Aerosol typing has been recognized as one of its high-priority activities of the AEROSAT (International Satellite Aerosol Science Network, http://aero-sat.org/) initiative. In the AEROSAT framework, a first critical review of aerosol typing procedures has been carried out. The review underlines the high heterogeneity in many aspects: approach, nomenclature, assumed number of components and parameters used for the

  9. Organic Aerosol Component (OACOMP) Value-Added Product

    SciTech Connect

    Fast, J; Zhang, Q; tilp, A; Shippert, T; Parworth, C; Mei, F

    2013-08-23

    Organic aerosol (OA, i.e., the organic fraction of particles) accounts for 10–90% of the fine aerosol mass globally and is a key determinant of aerosol radiative forcing. But atmospheric OA is poorly characterized and its life cycle insufficiently represented in models. As a result, current models are unable to simulate OA concentrations and properties accurately. This deficiency represents a large source of uncertainty in quantification of aerosol effects and prediction of future climate change. Evaluation and development of aerosol models require data products generated from field observations. Real-time, quantitative data acquired with aerosol mass spectrometers (AMS) (Canagaratna et al. 2007) are critical to this need. The AMS determines size-resolved concentrations of non-refractory (NR) species in submicrometer particles (PM1) with fast time resolution suitable for both ground-based and aircraft deployments. The high-resolution AMS (HR-AMS), which is equipped with a high mass resolution time-of-flight mass spectrometer, can be used to determine the elemental composition and oxidation degrees of OA (DeCarlo et al. 2006).

  10. Resonant ultrasound spectrometer

    DOEpatents

    Migliori, Albert; Visscher, William M.; Fisk, Zachary

    1990-01-01

    An ultrasound resonant spectrometer determines the resonant frequency spectrum of a rectangular parallelepiped sample of a high dissipation material over an expected resonant response frequency range. A sample holder structure grips corners of the sample between piezoelectric drive and receive transducers. Each transducer is mounted on a membrane for only weakly coupling the transducer to the holder structure and operatively contacts a material effective to remove system resonant responses at the transducer from the expected response range. i.e., either a material such as diamond to move the response frequencies above the range or a damping powder to preclude response within the range. A square-law detector amplifier receives the response signal and retransmits the signal on an isolated shield of connecting cabling to remove cabling capacitive effects. The amplifier also provides a substantially frequency independently voltage divider with the receive transducer. The spectrometer is extremely sensitive to enable low amplitude resonance to be detected for use in calculating the elastic constants of the high dissipation sample.

  11. The Athena Raman Spectrometer

    NASA Technical Reports Server (NTRS)

    Wang, Alian; Haskin, Larry A.; Jolliff, Bradley; Wdowiak, Tom; Agresti, David; Lane, Arthur L.

    2000-01-01

    Raman spectroscopy provides a powerful tool for in situ mineralogy, petrology, and detection of water and carbon. The Athena Raman spectrometer is a microbeam instrument intended for close-up analyses of targets (rock or soils) selected by the Athena Pancam and Mini-TES. It will take 100 Raman spectra along a linear traverse of approximately one centimeter (point-counting procedure) in one to four hours during the Mars' night. From these spectra, the following information about the target will extracted: (1) the identities of major, minor, and trace mineral phases, organic species (e.g., PAH or kerogen-like polymers), reduced inorganic carbon, and water-bearing phases; (2) chemical features (e.g. Mg/Fe ratio) of major minerals; and (3) rock textural features (e.g., mineral clusters, amygdular filling and veins). Part of the Athena payload, the miniaturized Raman spectrometer has been under development in a highly interactive collaboration of a science team at Washington University and the University of Alabama at Birmingham, and an engineering team at the Jet Propulsion Laboratory. The development has completed the brassboard stage and has produced the design for the engineering model.

  12. Spectrometer Observations Near Mawrth Vallis

    NASA Technical Reports Server (NTRS)

    2006-01-01

    minerals with different rock formations and to search for new minerals not resolved by OMEGA.

    CRISM has found that the iron-rich clays (lower left image) correspond with a layer of rock that is dark red in the true color view (upper left) and bright gray in the infrared (upper right). In addition, it has found previously undetected exposures of aluminum-rich clay, in a rock unit that is buff-colored in the true color view, and bluish in the infrared. Both types of rocks formed early in Mars' history, about 3.8 billion years ago. The difference in clay mineralogy reveals differences in the environment either over time or over a distance of kilometers. CRISM will be taking many more images of the Mawrth Vallis region to piece together the geologic history of this fascinating area that was once a wet oasis on Mars.

    The Compact Reconnaissance Imaging Spectrometer for Mars (CRISM) is one of six science instruments on NASA's Mars Reconnaissance Orbiter. Led by The Johns Hopkins University Applied Physics Laboratory, the CRISM team includes expertise from universities, government agencies and small businesses in the United States and abroad.

    CRISM's mission: Find the spectral fingerprints of aqueous and hydrothermal deposits and map the geology, composition and stratigraphy of surface features. The instrument will also watch the seasonal variations in Martian dust and ice aerosols, and water content in surface materials -- leading to new understanding of the climate.

    NASA's Jet Propulsion Laboratory, a division of the Califonia Institute of Technology, Pasadena, manages the Mars Reconnaissance Orbiter for the NASA Science Mission Directorate, Washington. Lockheed Martin Space Systems, Denver, is the prime contractor and built the spacecraft.

  13. A missing source of aerosols in Antarctica - beyond long-range transport, phytoplankton, and photochemistry

    NASA Astrophysics Data System (ADS)

    Giordano, Michael R.; Kalnajs, Lars E.; Avery, Anita; Goetz, J. Douglas; Davis, Sean M.; DeCarlo, Peter F.

    2017-01-01

    Understanding the sources and evolution of aerosols is crucial for constraining the impacts that aerosols have on a global scale. An unanswered question in atmospheric science is the source and evolution of the Antarctic aerosol population. Previous work over the continent has primarily utilized low temporal resolution aerosol filters to answer questions about the chemical composition of Antarctic aerosols. Bulk aerosol sampling has been useful in identifying seasonal cycles in the aerosol populations, especially in populations that have been attributed to Southern Ocean phytoplankton emissions. However, real-time, high-resolution chemical composition data are necessary to identify the mechanisms and exact timing of changes in the Antarctic aerosol. The recent 2ODIAC (2-Season Ozone Depletion and Interaction with Aerosols Campaign) field campaign saw the first ever deployment of a real-time, high-resolution aerosol mass spectrometer (SP-AMS - soot particle aerosol mass spectrometer - or AMS) to the continent. Data obtained from the AMS, and a suite of other aerosol, gas-phase, and meteorological instruments, are presented here. In particular, this paper focuses on the aerosol population over coastal Antarctica and the evolution of that population in austral spring. Results indicate that there exists a sulfate mode in Antarctica that is externally mixed with a mass mode vacuum aerodynamic diameter of 250 nm. Springtime increases in sulfate aerosol are observed and attributed to biogenic sources, in agreement with previous research identifying phytoplankton activity as the source of the aerosol. Furthermore, the total Antarctic aerosol population is shown to undergo three distinct phases during the winter to summer transition. The first phase is dominated by highly aged sulfate particles comprising the majority of the aerosol mass at low wind speed. The second phase, previously unidentified, is the generation of a sub-250 nm aerosol population of unknown composition

  14. Characterization of ambient aerosols at the San Francisco International Airport using BioAerosol Mass Spectrometry

    SciTech Connect

    Steele, P T; McJimpsey, E L; Coffee, K R; Fergenson, D P; Riot, V J; Tobias, H J; Woods, B W; Gard, E E; Frank, M

    2006-03-16

    The BioAerosol Mass Spectrometry (BAMS) system is a rapidly fieldable, fully autonomous instrument that can perform correlated measurements of multiple orthogonal properties of individual aerosol particles. The BAMS front end uses optical techniques to nondestructively measure a particle's aerodynamic diameter and fluorescence properties. Fluorescence can be excited at 266nm or 355nm and is detected in two broad wavelength bands. Individual particles with appropriate size and fluorescence properties can then be analyzed more thoroughly in a dual-polarity time-of-flight mass spectrometer. Over the course of two deployments to the San Francisco International Airport, more than 6.5 million individual aerosol particles were fully analyzed by the system. Analysis of the resulting data has provided a number of important insights relevant to rapid bioaerosol detection, which are described here.

  15. Aerosol penetration through filtering facepieces and respirator cartridges.

    PubMed

    Chen, C C; Lehtimäki, M; Willeke, K

    1992-09-01

    Air-purifying respirators must be certified following the National Institute for Occupational Safety and Health (NIOSH) filter test criteria (30 CFR 11). The criteria specify a range for the mean particle size and the measure of spread permissible for the test aerosol. The authors' experiments have shown that aerosol penetration as a function of particle size differs considerably among certified respirators of the same type. Filtering facepieces (disposable respirators) and cartridges of the dust-mist, dust-mist-fume, and high-efficiency particulate air type were tested. The respirators were sealed to mannequins in a test chamber. The aerosol concentrations inside and outside the respirator were measured by an aerodynamic particle sizer and a laser aerosol spectrometer over a particle size range of 0.1 to 15 microns. Five flow rates ranging from 5 to 100 L/min were used to study flow dependency. The aerosol penetration through the filters is presented as a function of particle size. Aerosol penetration and pressure drop are combined to express the performance of each filter in terms of "quality factor." Under the same test conditions, the quality factor of one respirator may be as much as 6.6 times more than that of another respirator of the same type. The filter quality factor has a greater aerosol size dependency as airflow and aerosol size increase. In general, cartridges have a larger surface area than filtering facepieces but not necessarily lower filter penetration or higher filter quality.(ABSTRACT TRUNCATED AT 250 WORDS)

  16. Spatial heterodyne spectrometer for FLEX

    NASA Astrophysics Data System (ADS)

    Scott, Alan; Zheng, Sheng-Hai; Brown, Stephen; Bell, Andrew

    2007-10-01

    A spatial heterodyne spectrometer (SHS) has significant advantages for high spectral resolution imaging over narrow pre-selected bands compared to traditional solutions. Given comparable optical étendue at R~6500, a field-widened SHS will have a throughput-resolution product ~170 x larger than an air-spaced etalon spectrometer, and ~1000 x larger than a standard grating spectrometer. The monolithic glass Michelson design and lack of moving parts allows maximum stability of spectral calibration over the mission life. For these reasons, SHS offers considerable advantages for the core spectrometer instrument in the European Space Agency's (ESA) Fluorescence Explorer (FLEX) mission.

  17. Laboratory Experiments and Instrument Intercomparison Studies of Carbonaceous Aerosol Particles

    SciTech Connect

    Davidovits, Paul

    2015-10-20

    ) two well-characterized source of soot particles and (b) a flow reactor for controlled OH and/or O3 oxidation of relevant gas phase species to produce well-characterized SOA particles. After formation, the aerosol particles are subjected to physical and chemical processes that simulate aerosol growth and aging. A suite of instruments in our laboratory is used to characterize the physical and chemical properties of aerosol particles before and after processing. The Time of Flight Aerosol Mass Spectrometer (ToF-AMS) together with a Scanning Mobility Particle Sizer (SMPS) measures particle mass, volume, density, composition (including black carbon content), dynamic shape factor, and fractal dimension. The–ToF-AMS was developed at ARI with Boston College participation. About 120 AMS instruments are now in service (including 5 built for DOE laboratories) performing field and laboratory studies world-wide. Other major instruments include a thermal denuder, two Differential Mobility Analyzers (DMA), a Cloud Condensation Nuclei Counter (CCN), a Thermal desorption Aerosol GC/MS (TAG) and the new Soot Particle Aerosol Mass Spectrometer (SP-AMS). Optical instrumentation required for the studies have been brought to our laboratory as part of ongoing and planned collaborative projects with colleagues from DOE, NOAA and university laboratories. Optical instruments that will be utilized include a Photoacoustic Spectrometer (PAS), a Cavity Ring Down Aerosol Extinction Spectrometer (CRD-AES), a Photo Thermal Interferometer (PTI), a new 7-wavelength Aethalometer and a Cavity Attenuated Phase Shift Extinction Monitor (CAPS). These instruments are providing aerosol absorption, extinction and scattering coefficients at a range of atmospherically relevant wavelengths. During the past two years our work has continued along the lines of our original proposal. We report on 12 completed and/or continuing projects conducted during the period 08/14 to 0814/2015. These projects are described in

  18. Measurements of Atmospheric Aerosol Vertical Distributions above Svalbard, Norway using Unmanned Aerial Systems (UAS)

    NASA Astrophysics Data System (ADS)

    Bates, T. S.; Johnson, J. E.; Stalin, S.; Telg, H.; Murphy, D. M.; Burkhart, J. F.; Quinn, P.; Storvold, R.

    2015-12-01

    Atmospheric aerosol vertical distributions were measured above Svalbard, Norway in April 2015 to investigate the processes controlling aerosol concentrations and radiative effects. The aerosol payload was flown in a NOAA/PMEL MANTA Unmanned Aerial System (UAS) on 9 flights totaling 19 flight hours. Measurements were made of particle number concentration and aerosol light absorption at three wavelengths, similar to those conducted in April 2011 (Bates et al., Atmos. Meas. Tech., 6, 2115-2120, 2013). A filter sample was collected on each flight for analyses of trace elements. Additional measurements in the aerosol payload in 2015 included aerosol size distributions obtained using a Printed Optical Particle Spectrometer (POPS) and aerosol optical depth obtained using a four wavelength miniature Scanning Aerosol Sun Photometer (miniSASP). The data show most of the column aerosol mass and resulting optical depth in the boundary layer but frequent aerosol layers aloft with high particle number concentration (2000 cm-3) and enhanced aerosol light absorption (1 Mm-1). Transport of these aerosol layers was assessed using FLEXPART particle dispersion models. The data contribute to an assessment of sources of BC to the Arctic and potential climate impacts.

  19. Investigation of brightness changes of MZ Cas and TZ Cas in B- and V-light

    NASA Technical Reports Server (NTRS)

    Lukatskaya, F. I.; Kheylo, E. S.

    1973-01-01

    The results are presented concerning statistical processing of two-color observations of MZ Cas and TZ Cas. Light histograms, dispersion and statistical amplitudes are given. Light variations of the variables are represented by normal stochastic processes. Observational data are tabulated.

  20. Putting the CAS Standards to Work. Training Manual for the CAS Self Assessment Guides.

    ERIC Educational Resources Information Center

    Yerian, Jean M.; Miller, Theodore K., Ed.

    These 18 self-assessment guides and training manual from the Council for the Advancement of Standards (CAS) for Student Services/Development Programs translate the CAS Standards and Guidelines of 1986 into a format for self-study purposes. These self-study guides allow an institution to assure compliance with minimally-acceptable practice, gain an…

  1. Particle Spectrometers for FRIB

    NASA Astrophysics Data System (ADS)

    Amthor, A. M.

    2014-09-01

    FRIB promises to dramatically expand the variety of nuclear systems available for direct experimental study by providing rates of many rare isotopes orders of magnitude higher than those currently available. A new generation of experimental systems, including new particle spectrometers will be critical to our ability to take full advantage of the scientific opportunities offered by FRIB. The High-Rigidity Spectrometer (HRS) will allow for experiments with the most neutron-rich and short-lived isotopes produced by in-flight fragmentation at FRIB. The bending capability of the HRS (8 Tm) matches to the rigidity for which rare isotopes are produced at the highest intensity in the FRIB fragment separator. The experimental program will be focused on nuclear structure and astrophysics, and allow for the use of other cutting-edge detection systems for gamma, neutron, and charged-particle detection. Stopped and reaccelerated beam studies will be an important compliment to in-flight techniques at FRIB, providing world-unique, high quality, intense rare isotope beams at low energies up to and beyond the Coulomb barrier--with the completion of ReA12--and serving many of the science goals of the broader facility, from nuclear structure and astrophysics to applications. Two specialized recoil spectrometers are being developed for studies with reaccelerated beams. SECAR, the Separator for Capture Reactions, will be built following ReA3, coupled to a windowless gas jet target, JENSA, and will focus on radiative capture reactions for astrophysics, particularly those needed to improve our understanding of novae and X-ray bursts. A recoil separator following ReA12 is proposed to address a variety of physics cases based on fusion-evaporation, Coulomb excitation, transfer, and deep-inelastic reactions by providing a large angular, momentum and charge state acceptance; a high mass resolving power; and the flexibility to couple to a variety of auxiliary detector systems. Two designs

  2. The organic aerosols of Titan

    NASA Technical Reports Server (NTRS)

    Khare, B. N.; Sagan, C.; Thompson, W. R.; Arakawa, E. T.; Suits, F.; Callcott, T. A.; Williams, M. W.; Shrader, S.; Ogino, H.; Willingham, T. O.

    1984-01-01

    The optical properties and chemical composition of thiolin, an organic solid synthesized by high-energy-electron irradiation in a plasma discharge (Sagan et al., 1984) to simulate the high-altitude aerosols of Titan, are investigated experimentally using monochromators, ellipsometers, and spectrometers (on thin films deposited by continuous dc discharge) and sequential and nonsequential pyrolytic gas chromatography/mass spectrometry (of the volatile component), respectively. The results are presented in tables and graphs and characterized. The real and imaginary elements of the complex refractive index in the visible are estimated as 1.65 and 0.004-0.08, respectively, in agreement with observations of Titan, and the IR absorption features include the nitrile band at 4.6 microns. The molecules identified in the volatile part of thiolin include complex species considered important in theoretical models of the origin of life on earth.

  3. Particle-Charge Spectrometer

    NASA Technical Reports Server (NTRS)

    Fuerstenau, Stephen; Wilson, Gregory R.

    2008-01-01

    An instrument for rapidly measuring the electric charges and sizes (from approximately 1 to approximately 100 micrometers) of airborne particles is undergoing development. Conceived for monitoring atmospheric dust particles on Mars, instruments like this one could also be used on Earth to monitor natural and artificial aerosols in diverse indoor and outdoor settings for example, volcanic regions, clean rooms, powder-processing machinery, and spray-coating facilities. The instrument incorporates a commercially available, low-noise, ultrasensitive charge-sensing preamplifier circuit. The input terminal of this circuit--the gate of a field-effect transistor--is connected to a Faraday-cage cylindrical electrode. The charged particles of interest are suspended in air or other suitable gas that is made to flow along the axis of the cylindrical electrode without touching the electrode. The flow can be channeled and generated by any of several alternative means; in the prototype of this instrument, the gas is drawn along a glass capillary tube (see upper part of figure) coaxial with the electrode. The size of a particle affects its rate of acceleration in the flow and thus affects the timing and shape of the corresponding signal peak generated by the charge-sensing amplifier. The charge affects the magnitude (and thus also the shape) of the signal peak. Thus, the signal peak (see figure) conveys information on both the size and electric charge of a sensed particle. In experiments thus far, the instrument has been found to be capable of measuring individual aerosol particle charges of magnitude greater than 350 e (where e is the fundamental unit of electric charge) with a precision of +/- 150 e. The instrument can sample particles at a rate as high as several thousand per second.

  4. The Retrieval of Aerosol Optical Thickness Using the MERIS Instrument

    NASA Astrophysics Data System (ADS)

    Mei, L.; Rozanov, V. V.; Vountas, M.; Burrows, J. P.; Levy, R. C.; Lotz, W.

    2015-12-01

    Retrieval of aerosol properties for satellite instruments without shortwave-IR spectral information, multi-viewing, polarization and/or high-temporal observation ability is a challenging problem for spaceborne aerosol remote sensing. However, space based instruments like the MEdium Resolution Imaging Spectrometer (MERIS) and the successor, Ocean and Land Colour Instrument (OLCI) with high calibration accuracy and high spatial resolution provide unique abilities for obtaining valuable aerosol information for a better understanding of the impact of aerosols on climate, which is still one of the largest uncertainties of global climate change evaluation. In this study, a new Aerosol Optical Thickness (AOT) retrieval algorithm (XBAER: eXtensible Bremen AErosol Retrieval) is presented. XBAER utilizes the global surface spectral library database for the determination of surface properties while the MODIS collection 6 aerosol type treatment is adapted for the aerosol type selection. In order to take the surface Bidirectional Reflectance Distribution Function (BRDF) effect into account for the MERIS reduce resolution (1km) retrieval, a modified Ross-Li mode is used. The AOT is determined in the algorithm using lookup tables including polarization created using Radiative Transfer Model SCIATRAN3.4, by minimizing the difference between atmospheric corrected surface reflectance with given AOT and the surface reflectance calculated from the spectral library. The global comparison with operational MODIS C6 product, Multi-angle Imaging SpectroRadiometer (MISR) product, Advanced Along-Track Scanning Radiometer (AATSR) aerosol product and the validation using AErosol RObotic NETwork (AERONET) show promising results. The current XBAER algorithm is only valid for aerosol remote sensing over land and a similar method will be extended to ocean later.

  5. Thermoluminescence emission spectrometer.

    PubMed

    Prescott, J R; Fox, P J; Akber, R A; Jensen, H E

    1988-08-15

    A sensitive thermoluminescence (TL) emission spectrometer based on Fourier transform spectroscopy is described. It employs a modified scanning Twyman-Green interferometer with photomultiplier detection in a photon-counting mode. The etendue is 180pi mm(2), and it covers the 350-600-nm wavelength range. The output can be displayed either as a 3-D isometric plot of intensity vs temperature and wavelength, as a contour diagram, or as a conventional TL glow curve of intensity vs temperature. It is sufficiently sensitive to record thermoluminescence spectra of dosimeter phosphors and minerals for thermoluminescence dating at levels corresponding to those found during actual use as radiation monitors or in dating. Examples of actual spectra are given.

  6. Photo ion spectrometer

    DOEpatents

    Gruen, D.M.; Young, C.E.; Pellin, M.J.

    1989-12-26

    A charged particle spectrometer is described for performing ultrasensitive quantitative analysis of selected atomic components removed from a sample. Significant improvements in performing energy and angular refocusing spectroscopy are accomplished by means of a two dimensional structure for generating predetermined electromagnetic field boundary conditions. Both resonance and non-resonance ionization of selected neutral atomic components allow accumulation of increased chemical information. A multiplexed operation between a SIMS mode and a neutral atomic component ionization mode with EARTOF analysis enables comparison of chemical information from secondary ions and neutral atomic components removed from the sample. An electronic system is described for switching high level signals, such as SIMS signals, directly to a transient recorder and through a charge amplifier to the transient recorder for a low level signal pulse counting mode, such as for a neutral atomic component ionization mode. 12 figs.

  7. Photo ion spectrometer

    DOEpatents

    Gruen, Dieter M.; Young, Charles E.; Pellin, Michael J.

    1989-01-01

    A charged particle spectrometer for performing ultrasensitive quantitative analysis of selected atomic components removed from a sample. Significant improvements in performing energy and angular refocusing spectroscopy are accomplished by means of a two dimensional structure for generating predetermined electromagnetic field boundary conditions. Both resonance and non-resonance ionization of selected neutral atomic components allow accumulation of increased chemical information. A multiplexed operation between a SIMS mode and a neutral atomic component ionization mode with EARTOF analysis enables comparison of chemical information from secondary ions and neutral atomic components removed from the sample. An electronic system is described for switching high level signals, such as SIMS signals, directly to a transient recorder and through a charge amplifier to the transient recorder for a low level signal pulse counting mode, such as for a neutral atomic component ionization mode.

  8. Bolometers as particle spectrometers

    NASA Astrophysics Data System (ADS)

    Stroke, H. H.; Artzner, G.; Coron, N.; Dambier, G.; Hansen, P. G.

    1986-02-01

    A spectrometer based on low-temperature calorimetry has been under development since 1983. The present detector, capable of recording individual alpha and beta particles and X-ray photons, is based on a composite diamond-germanium bolometer. The advantage of a composite bolometer is that it separates the absorption and detection functions. Diamond, as an absorber, is of particular advantage because of its low heat capacity and high thermal diffusivity. The goal is a theoretical energy resolution of a few eV at 0.1 K. Initial experiments at 1.3 K and 0.9 K, which give resolutions in the keV range, are still noise-limited. High-resolution applications, such as in X-ray astronomy and nuclear physics (in particular, neutron mass measurements) are foreseen.

  9. Aerosol properties derived from spectral actinic flux measurements

    NASA Astrophysics Data System (ADS)

    Stark, H.; Schmidt, K. S.; Pilewskie, P.; Cozic, J.; Wollny, A. G.; Brock, C. A.; Baynard, T.; Lack, D.; Parrish, D. D.; Fehsenfeld, F. C.

    2008-12-01

    Measurement of aerosol properties is very important for understanding climate change. Aerosol optical properties influence solar radiation throughout the troposphere. According to the Working Group I report of the intergovernmental panel for climate change [IPCC, 2007], aerosols have a direct radiative forcing of - 0.5±0.4 W/m2 with a medium to low level of scientific understanding. This relatively large uncertainty indicates the need for more frequent and precise measurements of aerosol properties. We will show how actinic flux measurements can be used to derive important optical aerosol parameters such as aerosol optical thickness and depth, surface albedo, angstrom exponent, radiative forcing by clouds and aerosols, aerosol extinction, and others. The instrument used for this study is a combination of two spectroradiometers measuring actinic flux in the ultraviolet and visible radiation range from 280 to 690 nm with a resolution of 1 nm. Actinic flux is measured as the radiation incident on a spherical surface with sensitivity independent of direction. In contrast, irradiance is measured as the radiation incident on a plane surface, which depends on the cosine of the incident angle. Our goal is to assess the capabilities of using spectral actinic flux measurements to derive various aerosol properties. Here we will compare 1) actinic flux measurements to irradiance measurements from the spectral solar flux radiometer (SSFR), 2) derived aerosol size distributions with measurements from a white light optical particle counter (WLOPC) and ultra high sensitivity aerosol size spectrometer (UHSAS), and 3) derived aerosol optical extinction with measurements from a cavity ringdown aerosol extinction spectrometer (CRD-AES). These comparisons will utilize data from three recent field campaigns over New England and the Atlantic Ocean (ICARTT 2004), Texas and the Gulf of Mexico during (TexAQS/GoMACCS 2006), and Alaska and the Arctic Ocean (ARCPAC 2008) when the instruments

  10. AEROSOL AND GAS MEASUREMENT

    EPA Science Inventory

    Measurements provide fundamental information for evaluating and managing the impact of aerosols on air quality. Specific measurements of aerosol concentration and their physical and chemical properties are required by different users to meet different user-community needs. Befo...

  11. Variability of Biomass Burning Aerosols Layers and Near Ground

    NASA Astrophysics Data System (ADS)

    Vasilescu, Jeni; Belegante, Livio; Marmureanu, Luminita; Toanca, Flori

    2016-06-01

    The aim of this study is to characterize aerosols from both chemical and optical point of view and to explore the conditions to sense the same particles in elevated layers and at the ground. Three days of continuous measurements using a multi-wavelength depolarization lidar(RALI) and a C-ToF-AMS aerosol mass spectrometer are analyzed. The presence of smoke particles was assessed in low level layers from RALI measurements. Chemical composition of submicronic volatile/semi-volatile aerosols at ground level was monitored by the CTOF AMS Several episodes of biomass burning aerosols have been identified by both techniques due to the presence of specific markers (f60, linear particle depolarization ratio, Ängström exponent).

  12. Overview of CRISPR-Cas9 Biology.

    PubMed

    Ratner, Hannah K; Sampson, Timothy R; Weiss, David S

    2016-12-01

    Prokaryotes use diverse strategies to improve fitness in the face of different environmental threats and stresses, including those posed by mobile genetic elements (e.g., bacteriophages and plasmids). To defend against these elements, many bacteria and archaea use elegant, RNA-directed, nucleic acid-targeting adaptive restriction machineries called CRISPR -: Cas (CRISPR-associated) systems. While providing an effective defense against foreign genetic elements, these systems have also been observed to play critical roles in regulating bacterial physiology during environmental stress. Increasingly, CRISPR-Cas systems, in particular the Type II systems containing the Cas9 endonuclease, have been exploited for their ability to bind desired nucleic acid sequences, as well as direct sequence-specific cleavage of their targets. Cas9-mediated genome engineering is transcending biological research as a versatile and portable platform for manipulating genetic content in myriad systems. Here, we present a systematic overview of CRISPR-Cas history and biology, highlighting the revolutionary tools derived from these systems, which greatly expand the molecular biologists' toolkit.

  13. Lunar orbital mass spectrometer experiment

    NASA Technical Reports Server (NTRS)

    Lord, W. P.

    1971-01-01

    The design, development, manufacture, test and calibration of five lunar orbital mass spectrometers with the four associated ground support equipment test sets are discussed. A mass spectrometer was installed in the Apollo 15 and one in the Apollo 16 Scientific Instrument Module within the Service Module. The Apollo 15 mass spectrometer was operated with collection of 38 hours of mass spectra data during lunar orbit and 50 hours of data were collected during transearth coast. The Apollo 16 mass spectrometer was operated with collection of 76 hours of mass spectra data during lunar orbit. However, the Apollo 16 mass spectrometer was ejected into lunar orbit upon malfunction of spacecraft boom system just prior to transearth insection and no transearth coast data was possible.

  14. Aerosol distribution apparatus

    DOEpatents

    Hanson, W.D.

    An apparatus for uniformly distributing an aerosol to a plurality of filters mounted in a plenum, wherein the aerosol and air are forced through a manifold system by means of a jet pump and released into the plenum through orifices in the manifold. The apparatus allows for the simultaneous aerosol-testing of all the filters in the plenum.

  15. Improved solid aerosol generator

    DOEpatents

    Prescott, D.S.; Schober, R.K.; Beller, J.

    1988-07-19

    An improved solid aerosol generator used to produce a gas borne stream of dry, solid particles of predetermined size and concentration. The improved solid aerosol generator nebulizes a feed solution of known concentration with a flow of preheated gas and dries the resultant wet heated aerosol in a grounded, conical heating chamber, achieving high recovery and flow rates. 2 figs.

  16. Solid aerosol generator

    DOEpatents

    Prescott, Donald S.; Schober, Robert K.; Beller, John

    1992-01-01

    An improved solid aerosol generator used to produce a gas borne stream of dry, solid particles of predetermined size and concentration. The improved solid aerosol generator nebulizes a feed solution of known concentration with a flow of preheated gas and dries the resultant wet heated aerosol in a grounded, conical heating chamber, achieving high recovery and flow rates.

  17. Solid aerosol generator

    DOEpatents

    Prescott, D.S.; Schober, R.K.; Beller, J.

    1992-03-17

    An improved solid aerosol generator used to produce a gas borne stream of dry, solid particles of predetermined size and concentration is disclosed. The improved solid aerosol generator nebulizes a feed solution of known concentration with a flow of preheated gas and dries the resultant wet heated aerosol in a grounded, conical heating chamber, achieving high recovery and flow rates. 2 figs.

  18. Sacroillite tuberculeuse: à propos de deux cas

    PubMed Central

    Diallo, Ismaël; Zabsonré, Joëlle Tiendrébéogo; Kambou, Bénilde Marie Ange Tiemtoré; Sondo, Apoline Kongnimissom; Sagna, Yempabou; Ouédraogo, Dieu-Donné

    2016-01-01

    La sacroiliite tuberculeuse est rare et de diagnostic difficile. Les auteurs rapportent deux cas. Il s'agissait dans le premier cas d'une patiente de 40 ans ayant une infection à VIH ; le diagnostic a été histologique après une biopsie chirurgicale. Le second cas a concerné un patient de 25 ans vivant en milieu carcéral chez qui le diagnostic a été établi sur la base des arguments cliniques, biologiques, radiologiques et l'efficacité du traitement ; l'intradermoréaction à la tuberculine était phlycténulaire. Le scanner a été indispensable au diagnostic lésionnel en montrant une érosion des berges et des abcès des parties molles. Le traitement a été médical et a fait appel aux antituberculeux. PMID:28292032

  19. Aerosol algorithm evaluation within aerosol-CCI

    NASA Astrophysics Data System (ADS)

    Kinne, Stefan; Schulz, Michael; Griesfeller, Jan

    Properties of aerosol retrievals from space are difficult. Even data from dedicated satellite sensors face contaminations which limit the accuracy of aerosol retrieval products. Issues are the identification of complete cloud-free scenes, the need to assume aerosol compositional features in an underdetermined solution space and the requirement to characterize the background at high accuracy. Usually the development of aerosol is a slow process, requiring continuous feedback from evaluations. To demonstrate maturity, these evaluations need to cover different regions and seasons and many different aerosol properties, because aerosol composition is quite diverse and highly variable in space and time, as atmospheric aerosol lifetimes are only a few days. Three years ago the ESA Climate Change Initiative started to support aerosol retrieval efforts in order to develop aerosol retrieval products for the climate community from underutilized ESA satellite sensors. The initial focus was on retrievals of AOD (a measure for the atmospheric column amount) and of Angstrom (a proxy for aerosol size) from the ATSR and MERIS sensors on ENVISAT. The goal was to offer retrieval products that are comparable or better in accuracy than commonly used NASA products of MODIS or MISR. Fortunately, accurate reference data of ground based sun-/sky-photometry networks exist. Thus, retrieval assessments could and were conducted independently by different evaluation groups. Here, results of these evaluations for the year 2008 are summarized. The capability of these newly developed retrievals is analyzed and quantified in scores. These scores allowed a ranking of competing efforts and also allow skill comparisons of these new retrievals against existing and commonly used retrievals.

  20. Evolution and classification of the CRISPR-Cas systems

    PubMed Central

    S. Makarova, Kira; H. Haft, Daniel; Barrangou, Rodolphe; J. J. Brouns, Stan; Charpentier, Emmanuelle; Horvath, Philippe; Moineau, Sylvain; J. M. Mojica, Francisco; I. Wolf, Yuri; Yakunin, Alexander F.; van der Oost, John; V. Koonin, Eugene

    2012-01-01

    The CRISPR–Cas (clustered regularly interspaced short palindromic repeats–CRISPR-associated proteins) modules are adaptive immunity systems that are present in many archaea and bacteria. These defence systems are encoded by operons that have an extraordinarily diverse architecture and a high rate of evolution for both the cas genes and the unique spacer content. Here, we provide an updated analysis of the evolutionary relationships between CRISPR–Cas systems and Cas proteins. Three major types of CRISPR–Cas system are delineated, with a further division into several subtypes and a few chimeric variants. Given the complexity of the genomic architectures and the extremely dynamic evolution of the CRISPR–Cas systems, a unified classification of these systems should be based on multiple criteria. Accordingly, we propose a `polythetic' classification that integrates the phylogenies of the most common cas genes, the sequence and organization of the CRISPR repeats and the architecture of the CRISPR–cas loci. PMID:21552286

  1. SnapShot: Class 1 CRISPR-Cas Systems.

    PubMed

    Makarova, Kira S; Zhang, Feng; Koonin, Eugene V

    2017-02-23

    Class 1 CRISPR-Cas systems are characterized by effector modules consisting of multiple subunits. Class 1 systems comprise about 90% of all CRISPR-Cas loci identified in bacteria and archaea and can target both DNA and RNA.

  2. Aromatic Structure in Simulates Titan Aerosol

    NASA Technical Reports Server (NTRS)

    Trainer, Melissa G.; Loeffler, M. J.; Anderson, C. M.; Hudson, R. L.; Samuelson, R. E.; Moore, M. A.

    2011-01-01

    Observations of Titan by the Cassini Composite Infrared Spectrometer (CIRS) between 560 and 20 per centimeter (approximately 18 to 500 micrometers) have been used to infer the vertical variations of Titan's ice abundances, as well as those of the aerosol from the surface to an altitude of 300 km [1]. The aerosol has a broad emission feature centered approximately at 140 per centimeter (71 micrometers). As seen in Figure 1, this feature cannot be reproduced using currently available optical constants from laboratory-generated Titan aerosol analogs [2]. The far-IR is uniquely qualified for investigating low-energy vibrational motions within the lattice structures of COITIDlex aerosol. The feature observed by CIRS is broad, and does not likely arise from individual molecules, but rather is representative of the skeletal movements of macromolecules. Since Cassini's arrival at Titan, benzene (C6H6) has been detected in the atmosphere at ppm levels as well as ions that may be polycyclic aromatic hydrocarbons (PAHs) [3]. We speculate that the feature may be a blended composite that can be identified with low-energy vibrations of two-dimensional lattice structures of large molecules, such as PAHs or nitrogenated aromatics. Such structures do not dominate the composition of analog materials generated from CH4 and N2 irradiation. We are performing studies forming aerosol analog via UV irradiation of aromatic precursors - specifically C6H6 - to understand how the unique chemical architecture of the products will influence the observable aerosol characteristics. The optical and chemical properties of the aromatic analog will be compared to those formed from CH4/N2 mixtures, with a focus on the as-yet unidentified far-IR absorbance feature. Preliminary results indicate that the photochemically-formed aromatic aerosol has distinct chemical composition, and may incorporate nitrogen either into the ring structure or adjoined chemical groups. These compositional differences are

  3. CRISPR-Cas immunity in prokaryotes.

    PubMed

    Marraffini, Luciano A

    2015-10-01

    Prokaryotic organisms are threatened by a large array of viruses and have developed numerous defence strategies. Among these, only clustered, regularly interspaced short palindromic repeat (CRISPR)-Cas systems provide adaptive immunity against foreign elements. Upon viral injection, a small sequence of the viral genome, known as a spacer, is integrated into the CRISPR locus to immunize the host cell. Spacers are transcribed into small RNA guides that direct the cleavage of the viral DNA by Cas nucleases. Immunization through spacer acquisition enables a unique form of evolution whereby a population not only rapidly acquires resistance to its predators but also passes this resistance mechanism vertically to its progeny.

  4. Highly efficient Cas9-mediated transcriptional programming

    DOE PAGES

    Chavez, Alejandro; Scheiman, Jonathan; Vora, Suhani; ...

    2015-03-02

    The RNA-guided nuclease Cas9 can be reengineered as a programmable transcription factor. However, modest levels of gene activation have limited potential applications. Here we describe an improved transcriptional regulator through the rational design of a tripartite activator, VP64-p65-Rta (VPR), fused to nuclease-null Cas9. Here, we demonstrate its utility in activating endogenous coding and non-coding genes, targeting several genes simultaneously and stimulating neuronal differentiation of human induced pluripotent stem cells (iPSCs).

  5. VEGAS: VErsatile GBT Astronomical Spectrometer

    NASA Astrophysics Data System (ADS)

    Bussa, Srikanth; VEGAS Development Team

    2012-01-01

    The National Science Foundation Advanced Technologies and Instrumentation (NSF-ATI) program is funding a new spectrometer backend for the Green Bank Telescope (GBT). This spectrometer is being built by the CICADA collaboration - collaboration between the National Radio Astronomy Observatory (NRAO) and the Center for Astronomy Signal Processing and Electronics Research (CASPER) at the University of California Berkeley.The backend is named as VErsatile GBT Astronomical Spectrometer (VEGAS) and will replace the capabilities of the existing spectrometers. This backend supports data processing from focal plane array systems. The spectrometer will be capable of processing up to 1.25 GHz bandwidth from 8 dual polarized beams or a bandwidth up to 10 GHz from a dual polarized beam.The spectrometer will be using 8-bit analog to digital converters (ADC), which gives a better dynamic range than existing GBT spectrometers. There will be 8 tunable digital sub-bands within the 1.25 GHz bandwidth, which will enhance the capability of simultaneous observation of multiple spectral transitions. The maximum spectral dump rate to disk will be about 0.5 msec. The vastly enhanced backend capabilities will support several science projects with the GBT. The projects include mapping temperature and density structure of molecular clouds; searches for organic molecules in the interstellar medium; determination of the fundamental constants of our evolving Universe; red-shifted spectral features from galaxies across cosmic time and survey for pulsars in the extreme gravitational environment of the Galactic Center.

  6. Neutron range spectrometer

    DOEpatents

    Manglos, Stephen H.

    1989-06-06

    A neutron range spectrometer and method for determining the neutron energy spectrum of a neutron emitting source are disclosed. Neutrons from the source are collimnated along a collimation axis and a position sensitive neutron counter is disposed in the path of the collimated neutron beam. The counter determines positions along the collimation axis of interactions between the neutrons in the neutron beam and a neutron-absorbing material in the counter. From the interaction positions, a computer analyzes the data and determines the neutron energy spectrum of the neutron beam. The counter is preferably shielded and a suitable neutron-absorbing material is He-3. The computer solves the following equation in the analysis: ##EQU1## where: N(x).DELTA.x=the number of neutron interactions measured between a position x and x+.DELTA.x, A.sub.i (E.sub.i).DELTA.E.sub.i =the number of incident neutrons with energy between E.sub.i and E.sub.i +.DELTA.E.sub.i, and C=C(E.sub.i)=N .sigma.(E.sub.i) where N=the number density of absorbing atoms in the position sensitive counter means and .sigma. (E.sub.i)=the average cross section of the absorbing interaction between E.sub.i and E.sub.i +.DELTA.E.sub.i.

  7. Photo ion spectrometer

    DOEpatents

    Gruen, Dieter M.; Young, Charles E.; Pellin, Michael J.

    1989-01-01

    A method and apparatus for extracting for quantitative analysis ions of selected atomic components of a sample. A lens system is configured to provide a slowly diminishing field region for a volume containing the selected atomic components, enabling accurate energy analysis of ions generated in the slowly diminishing field region. The lens system also enables focusing on a sample of a charged particle beam, such as an ion beam, along a path length perpendicular to the sample and extraction of the charged particles along a path length also perpendicular to the sample. Improvement of signal to noise ratio is achieved by laser excitation of ions to selected autoionization states before carrying out quantitative analysis. Accurate energy analysis of energetic charged particles is assured by using a preselected resistive thick film configuration disposed on an insulator substrate for generating predetermined electric field boundary conditions to achieve for analysis the required electric field potential. The spectrometer also is applicable in the fields of SIMS, ISS and electron spectroscopy.

  8. Photo ion spectrometer

    DOEpatents

    Gruen, D.M.; Young, C.E.; Pellin, M.J.

    1989-08-08

    A method and apparatus are described for extracting for quantitative analysis ions of selected atomic components of a sample. A lens system is configured to provide a slowly diminishing field region for a volume containing the selected atomic components, enabling accurate energy analysis of ions generated in the slowly diminishing field region. The lens system also enables focusing on a sample of a charged particle beam, such as an ion beam, along a path length perpendicular to the sample and extraction of the charged particles along a path length also perpendicular to the sample. Improvement of signal to noise ratio is achieved by laser excitation of ions to selected auto-ionization states before carrying out quantitative analysis. Accurate energy analysis of energetic charged particles is assured by using a preselected resistive thick film configuration disposed on an insulator substrate for generating predetermined electric field boundary conditions to achieve for analysis the required electric field potential. The spectrometer also is applicable in the fields of SIMS, ISS and electron spectroscopy. 8 figs.

  9. THEMIS Observations of Atmospheric Aerosol Optical Depth

    NASA Technical Reports Server (NTRS)

    Smith, Michael D.; Bandfield, Joshua L.; Christensen, Philip R.; Richardson, Mark I.

    2003-01-01

    The Mars Odyssey spacecraft entered into Martian orbit in October 2001 and after successful aerobraking began mapping in February 2002 (approximately Ls=330 deg.). Images taken by the Thermal Emission Imaging System (THEMIS) on-board the Odyssey spacecraft allow the quantitative retrieval of atmospheric dust and water-ice aerosol optical depth. Atmospheric quantities retrieved from THEMIS build upon existing datasets returned by Mariner 9, Viking, and Mars Global Surveyor (MGS). Data from THEMIS complements the concurrent MGS Thermal Emission Spectrometer (TES) data by offering a later local time (approx. 2:00 for TES vs. approx. 4:00 - 5:30 for THEMIS) and much higher spatial resolution.

  10. Method for calibrating mass spectrometers

    DOEpatents

    Anderson, Gordon A [Benton City, WA; Brands, Michael D [Richland, WA; Bruce, James E [Schwenksville, PA; Pasa-Tolic, Ljiljana [Richland, WA; Smith, Richard D [Richland, WA

    2002-12-24

    A method whereby a mass spectra generated by a mass spectrometer is calibrated by shifting the parameters used by the spectrometer to assign masses to the spectra in a manner which reconciles the signal of ions within the spectra having equal mass but differing charge states, or by reconciling ions having known differences in mass to relative values consistent with those known differences. In this manner, the mass spectrometer is calibrated without the need for standards while allowing the generation of a highly accurate mass spectra by the instrument.

  11. Multiple order common path spectrometer

    NASA Technical Reports Server (NTRS)

    Newbury, Amy B. (Inventor)

    2010-01-01

    The present invention relates to a dispersive spectrometer. The spectrometer allows detection of multiple orders of light on a single focal plane array by splitting the orders spatially using a dichroic assembly. A conventional dispersion mechanism such as a defraction grating disperses the light spectrally. As a result, multiple wavelength orders can be imaged on a single focal plane array of limited spectral extent, doubling (or more) the number of spectral channels as compared to a conventional spectrometer. In addition, this is achieved in a common path device.

  12. Characteristics of Interstitial Aerosol in Cold and Warm Clouds during the Ice-T Campaign

    NASA Astrophysics Data System (ADS)

    Dhaniyala, S.; He, M.; Moharreri, A.; Craig, L.

    2012-12-01

    Accurate calculation of the contribution of aerosols to the radiative forcing budget requires an understanding of the aerosol role in cloud formation. From a global climate perspective, aerosol-cloud processes must be represented by simple parametric models that can relate aerosol properties to the characteristics of the clouds formed. The development and testing of such simple models requires aerosol-cloud data from a large number of clouds systems. While reasonably accurate cloud data is currently available from a large number of well-established cloud probes, information about aerosol particles in clouds is largely unavailable because of the problem of artifacts in aerosol measurements from the shatter of cloud droplets. During the recent ICE-T campaign (Summer 2011), several different interstitial aerosol inlets were deployed and aerosol measurements were made in a variety of tropical convective clouds, focused particularly on conditions that permit the formation of ice within these systems. The flight operations were based in St. Croix, U.S. Virgin Islands and sampling was largely conducted within ~ 600 miles of this location. The use of new samplers that permit shatter-free sampling of aerosol particles in cold and clouds has allowed for the collection of significant data on interstitial aerosol in tropical convective clouds. Of particular interest are measurements of aerosol size distributions inside and outside clouds made with a fast mobility spectrometer. Size distributions were obtained at 20-30 second resolution, permitting direct measurements of the scavenged aerosol population in clouds and the differences in the scavenged fraction as a function of cloud properties. As part of this presentation, the characteristics of interstitial aerosol in various cloud conditions will be presented and the transformation of aerosol population during cloud processing will be discussed.

  13. In-place testing of tandem HEPA filter stages using fluorescent aerosols

    SciTech Connect

    Elder, J.C.; Kyle, T.G.; Tillery, M.I.; Ettinger, H.J.

    1980-01-01

    Fluorescent test aerosols were used in field testing of large multiple-stage HEPA filter systems. The technique excluded interference from non-fluorescent background particles known to leak into the plenum or ducting between the filters and the downstream sampling probe. This technique solved the problem of measuring extremely low concentrations of the test aerosol in the presence of background aerosol. The upstream fluorescent test aerosol was diluted with clean air and drawn into a single particle aerosol spectrometer capable of counting, sizing, and detecting fluorescence of each particle. The particle sizing function was performed on light scattered by the particle passing through the beam of a helium-cadmium laser. Concurrently the fluorescence excited by the laser illumination was detected at a longer wavelength. Since spectrometer response in the fluorescent mode was <2% of naturally occurring aerosols, background aerosols were insignificant as an interference to the downstream concentration measurement. Decontamination factors (DF) on the order of 10/sup 8/ were measured in the field studies on >9.4 m/sup 3//s (20,000 cfm) systems. Additional generator capacity and acceptably lower test aerosol to background aerosol concentraion ratios could be used to extend this capability to measure DF greater than 10/sup 8/. Dye-tagged DOP aerosols were generated either by gas-thermal or sonic nozzle generators. Experiments with the gas-thermal generator showed only 20% of fluorescence from the dye was degraded by the vaporization process. A single sonic nozzle was shown to aerosolize 0.7 to 1.0 L/h of dye-tagged DOP aerosol in the proper size range for HEPA filter testing. A multiple sonic nozzle generator is a practical consideration to provide greater capacity.

  14. Aerosol interactions between the surface and the atmosphere: Urban fluxes, forest canopy vertical exchange, and wintertime urban patterns

    NASA Astrophysics Data System (ADS)

    Grivicke, Rasa

    Atmospheric aerosols play a major role in regional atmospheric chemistry and air quality, while on a global scale, aerosol processes continue to represent the largest source of uncertainty related to climate change. An important aspect of understanding the role of aerosols in these areas is to document the vertical exchange of aerosols with the surface in both urban and rural landscapes since the vertical exchange represents important sources and sinks of aerosols on regional and global scales. In this dissertation, investigation of aerosol dynamics is described for three separate field studies. First, urban eddy covariance flux measurements were made from a building rooftop in Mexico City using a quadrupole aerosol mass spectrometer (Q-AMS) to determine the fluxes of aerosol species to/from the urban landscape. Second, conditional sampling of fine particles in updrafts and downdrafts was performed above a pine forest in Colorado using a thermal desorption chemical ionization mass spectrometer (TD-CIMS) to investigate the relative strengths of sources and sinks for speciated aerosol in a forest environment. Third, the aerosol and gas phase pollutant patterns, measured in Boise, ID during wintertime inversion conditions, were analyzed with respect to the daily evolution of the planetary boundary layer depth and surface meteorological conditions. This dissertation describes the methods used for each of the three studies and summarizes the analysis of the results.

  15. Coastal Research Imaging Spectrometer

    NASA Technical Reports Server (NTRS)

    2002-01-01

    The Coastal Research Imaging Spectrometer (CRIS) is an airborne remote-sensing system designed specifically for research on the physical, chemical, and biological characteristics of coastal waters. The CRIS includes a visible-light hyperspectral imaging subsystem for measuring the color of water, which contains information on the biota, sediment, and nutrient contents of the water. The CRIS also includes an infrared imaging subsystem, which provides information on the temperature of the water. The combination of measurements enables investigation of biological effects of both natural and artificial flows of water from land into the ocean, including diffuse and point-source flows that may contain biological and/or chemical pollutants. Temperature is an important element of such measurements because temperature contrasts can often be used to distinguish among flows from different sources: for example, a sewage outflow could manifest itself in spectral images as a local high-temperature anomaly.anomaly. Both the visible and infrared subsystems scan in "pushbroom" mode: that is, an aircraft carrying the system moves along a ground track, the system is aimed downward, and image data are acquired in acrosstrack linear arrays of pixels. Both subsystems operate at a frame rate of 30 Hz. The infrared and visible-light optics are adjusted so that both subsystems are aimed at the same moving swath, which has across-track angular width of 15. Data from the infrared and visible imaging subsystems are stored in the same file along with aircraft-position data acquired by a Global Positioning System receiver. The combination of the three sets of data is used to construct infrared and hyperspectral maps of scanned areas shown.

  16. Alpha Magnetic Spectrometer (AMS) Overview

    NASA Video Gallery

    The Alpha Magnetic Spectrometer (AMS) is flying to the station on STS-134. The AMS experiment is a state-of-the-art particle physics detector being operated by an international team composed of 60 ...

  17. Fast-neutron spectrometer developments

    NASA Technical Reports Server (NTRS)

    Moler, R. B.; Zagotta, W. E.; Baker, S. I.

    1973-01-01

    Li6 sandwich-type neutron spectrometer is equipped with proportional counter for particle identification. System uses current-sensitive preamplifiers to minimize pile-up of gamma-ray and particle pulses.

  18. Boosting plant immunity with CRISPR/Cas.

    PubMed

    Chaparro-Garcia, Angela; Kamoun, Sophien; Nekrasov, Vladimir

    2015-11-19

    CRISPR/Cas has recently been transferred to plants to make them resistant to geminiviruses, a damaging family of DNA viruses. We discuss the potential and the limitations of this method.See related Research: http://www.genomebiology.com/2015/16/1/238.

  19. Using the CAS Standards in Assessment Projects

    ERIC Educational Resources Information Center

    Dean, Laura A.

    2013-01-01

    This chapter provides an overview of the use of professional standards of practice in assessment and of the Council for the Advancement of Standards in Higher Education (CAS). It outlines a model for conducting program self-studies and discusses the importance of implementing change based on assessment results.

  20. Effects of Using a Computer Algebra System (CAS) on Junior College Students' Attitudes towards CAS and Achievement in Mathematics

    ERIC Educational Resources Information Center

    Leng, Ng Wee; Choo, Kwee Tiow; Soon, Lau Hock; Yi-Huak, Koh; Sun, Yap Yew

    2005-01-01

    This study examines the effects of using Texas Instruments' Voyage 200 calculator (V200), a graphing calculator with a built-in computer algebra system (CAS), on attitudes towards CAS and achievement in mathematics of junior college students (17 year olds). Students' attitudes towards CAS were examined using a 40-item Likert-type instrument…

  1. Structural plasticity and in vivo activity of Cas1 from the type I-F CRISPR-Cas system.

    PubMed

    Wilkinson, Max E; Nakatani, Yoshio; Staals, Raymond H J; Kieper, Sebastian N; Opel-Reading, Helen K; McKenzie, Rebecca E; Fineran, Peter C; Krause, Kurt L

    2016-04-15

    CRISPR-Cas systems are adaptive immune systems in prokaryotes that provide protection against viruses and other foreign DNA. In the adaptation stage, foreign DNA is integrated into CRISPR (clustered regularly interspaced short palindromic repeat) arrays as new spacers. These spacers are used in the interference stage to guide effector CRISPR associated (Cas) protein(s) to target complementary foreign invading DNA. Cas1 is the integrase enzyme that is central to the catalysis of spacer integration. There are many diverse types of CRISPR-Cas systems, including type I-F systems, which are typified by a unique Cas1-Cas2-3 adaptation complex. In the present study we characterize the Cas1 protein of the potato phytopathogen Pectobacterium atrosepticum, an important model organism for understanding spacer acquisition in type I-F CRISPR-Cas systems. We demonstrate by mutagenesis that Cas1 is essential for adaptation in vivo and requires a conserved aspartic acid residue. By X-ray crystallography, we show that although P. atrosepticum Cas1 adopts a fold conserved among other Cas1 proteins, it possesses remarkable asymmetry as a result of structural plasticity. In particular, we resolve for the first time a flexible, asymmetric loop that may be unique to type I-F Cas1 proteins, and we discuss the implications of these structural features for DNA binding and enzymatic activity.

  2. The GRAVITY spectrometers: optical qualification

    NASA Astrophysics Data System (ADS)

    Yazici, Senol; Straubmeier, Christian; Wiest, Michael; Wank, Imke; Fischer, Sebastian; Horrobin, Matthew; Eisenhauer, Frank; Perrin, Guy; Perraut, Karine; Brandner, Wolfgang; Amorim, Antonio; Schöller, Markus; Eckart, Andreas

    2014-07-01

    GRAVITY1 is a 2nd generation Very Large Telescope Interferometer (VLTI) operated in the astronomical K-band. In the Beam Combiner Instrument2 (BCI) four Fiber Couplers3 (FC) will feed the light coming from each telescope into two fibers, a reference channel for the fringe tracking spectrometer4 (FT) and a science channel for the science spectrometer4 (SC). The differential Optical Path Difference (dOPD) between the two channels will be corrected using a novel metrology concept.5 The metrology laser will keep control of the dOPD of the two channels. It is injected into the spectrometers and detected at the telescope level. Piezo-actuated fiber stretchers correct the dOPD accordingly. Fiber-fed Integrated Optics6 (IO) combine coherently the light of all six baselines and feed both spectrometers. Assisted by Infrared Wavefront Sensors7 (IWS) at each Unit Telescope (UT) and correcting the path difference between the channels with an accuracy of up to 5 nm, GRAVITY will push the limits of astrometrical accuracy to the order of 10 μas and provide phase-referenced interferometric imaging with a resolution of 4 mas. The University of Cologne developed, constructed and tested both spectrometers of the camera system. Both units are designed for the near infrared (1.95 - 2.45 μm) and are operated in a cryogenic environment. The Fringe Tracker is optimized for highest transmission with fixed spectral resolution (R = 22) realized by a double-prism.8 The Science spectrometer is more diverse and allows to choose from three different spectral resolutions8 (R = [22, 500, 4000]), where the lowest resolution is achieved with a prism and the higher resolutions are realized with grisms. A Wollaston prism in each spectrometer allows for polarimetric splitting of the light. The goal for the spectrometers is to concentrate at least 90% of the ux in 2 × 2 pixel (36 × 36 μm2) for the Science channel and in 1 pixel (24 × 24 μm) in the Fringe Tracking channel. In Section 1, we present

  3. Coordinated Airborne, Spaceborne, and Ground-Based Measurements of Massive, Thick Aerosol Layers During the Dry Season in Southern Africa

    NASA Technical Reports Server (NTRS)

    Schmid, B.; Redemann, J.; Russell, P. B.; Hobbs, P. V.; Hlavka, D. L.; McGill, M. J.; Holben, B. N.; Welton, E. J.; Campbell, J.; Torres, O.; Hipskind, R. Stephen (Technical Monitor)

    2002-01-01

    During the dry-season airborne campaign of the Southern African Regional Science Initiative (SAFARI 2000), unique coordinated observations were made of massive, thick aerosol layers. These layers were often dominated by aerosols from biomass burning. We report on airborne Sunphotometer measurements of aerosol optical depth (lambda=354-1558 nm), columnar water vapor, and vertical profiles of aerosol extinction and water vapor density that were obtained aboard the University of Washington's Convair-580 research aircraft. We compare these with ground-based AERONET Sun/sky radiometer results, with ground based lidar data MPL-Net), and with measurements from a downward-pointing lidar aboard the high-flying NASA ER-2 aircraft. Finally, we show comparisons between aerosol optical depths from the Sunphotometer and those retrieved over land and over water using four spaceborne sensors (TOMS (Total Ozone Mapping Spectrometer), MODIS (Moderate Resolution Imaging Spectrometer), MISR (Multiangle Imaging Spectroradiometer) and ATSR-2 (Along Track Scanning Radiometer)).

  4. CasHRA (Cas9-facilitated Homologous Recombination Assembly) method of constructing megabase-sized DNA

    PubMed Central

    Zhou, Jianting; Wu, Ronghai; Xue, Xiaoli; Qin, Zhongjun

    2016-01-01

    Current DNA assembly methods for preparing highly purified linear subassemblies require complex and time-consuming in vitro manipulations that hinder their ability to construct megabase-sized DNAs (e.g. synthetic genomes). We have developed a new method designated ‘CasHRA (Cas9-facilitated Homologous Recombination Assembly)’ that directly uses large circular DNAs in a one-step in vivo assembly process. The large circular DNAs are co-introduced into Saccharomyces cerevisiae by protoplast fusion, and they are cleaved by RNA-guided Cas9 nuclease to release the linear DNA segments for subsequent assembly by the endogenous homologous recombination system. The CasHRA method allows efficient assembly of multiple large DNA segments in vivo; thus, this approach should be useful in the last stage of genome construction. As a proof of concept, we combined CasHRA with an upstream assembly method (Gibson procedure of genome assembly) and successfully constructed a 1.03 Mb MGE-syn1.0 (Minimal Genome of Escherichia coli) that contained 449 essential genes and 267 important growth genes. We expect that CasHRA will be widely used in megabase-sized genome constructions. PMID:27220470

  5. One Martian Year of Atmospheric Observations by the Thermal Emission Spectrometer

    NASA Technical Reports Server (NTRS)

    Smith, Michael D.; Pearl, John C.; Conrath, Barney J.; Christensen, Philip R.; Vondrak, Richard R. (Technical Monitor)

    2001-01-01

    The Mars Global Surveyor has completed one full Martian year of mapping. Infrared spectra returned by the Thermal Emission Spectrometer (TES) are very well suited for monitoring the thermal structure and the distribution of aerosols and water vapor in the Mars atmosphere. Nadir-viewing spectra allow a global picture of the state of the Mars atmosphere on a daily basis. We report here on the observed annual cycle of the latitudinal dependence of atmospheric temperature, dust aerosols, water-ice clouds, and water vapor.

  6. Controlling UCAVs by JTACs in CAS missions

    NASA Astrophysics Data System (ADS)

    Kumaş, A. E.

    2014-06-01

    By means of evolving technology, capabilities of UAVs (Unmanned Aerial Vehicle)s are increasing rapidly. This development provides UAVs to be used in many different areas. One of these areas is CAS (Close Air Support) mission. UAVs have several advantages compared to manned aircraft, however there are also some problematic areas. The remote controlling of these vehicles from thousands of nautical miles away via satellite may lead to various problems both ethical and tactical aspects. Therefore, CAS missions require a good level of ALI (Air-Land Integration), a high SA (situational awareness) and precision engagement. In fact, there is an aware friendly element in the target area in CAS missions, unlike the other UAV operations. This element is an Airman called JTAC (Joint Terminal Attack Controller). Unlike the JTAC, UAV operators are too far away from target area and use the limited FOV (Field of View) provided by camera and some other sensor data. In this study, target area situational awareness of a UAV operator and a JTAC, in a high-risk mission for friendly ground forces and civilians such as CAS, are compared. As a result of this comparison, answer to the question who should control the UCAV (Unmanned Combat Aerial Vehicle) in which circumstances is sought. A literature review is made in UAV and CAS fields and recent air operations are examined. The control of UCAV by the JTAC is assessed by SWOT analysis and as a result it is deduced that both control methods can be used in different situations within the framework of the ROE (Rules Of Engagement) is reached.

  7. An Overview of Observations of Interstitial Aerosol during ICE-T

    NASA Astrophysics Data System (ADS)

    Dhaniyala, S.; Craig, L.; Moharreri, A.; Brown, M.; Lathem, T.; Nenes, A.; Rogers, D. C.

    2011-12-01

    Aerosols play a significant role in global climate through their direct and indirect interaction with longwave and shortwave radiation. Of particular importance is the indirect contribution of aerosols to the radiative forcing budget through the formation and evolution of cloud systems. Accurate global climate modeling requires an effective treatment of the indirect effect with simple aerosol-cloud parametric models. Validation of such models requires data from a wide range of cloud systems. Aerosol-cloud model validation efforts have relied mostly on the measurement of activated particles, largely because of a lack of data on the non-activated or interstitial particle populations. Knowledge of interstitial particles in cloud systems enables, not just an improved validation of existing aerosol-cloud models, but also a more complete understanding of the aerosol processing in clouds and the possible role of aerosol in ice nucleation. During the recent ICE-T campaign, comprehensive interstitial aerosol measurements were made in a variety of tropical convective clouds, focused particularly on conditions that permit the formation of ice within these systems. The flight operations were based in St. Croix, U.S. Virgin Islands and sampling was largely conducted within ~ 600 miles of this location. Central to the sampling of interstitial aerosol was the deployment of a new aerosol sampler that provides shatter-free sampling of aerosol particles in ice clouds and significantly reduced shattering in warm clouds (relative to other aircraft aerosol inlets). This inlet samples aerosol particles smaller than ~2 microns. The condensation nuclei (CN) measurements were made with a TSI 3010 condensation particle counter (CPC), while particle size distributions were measured using DMT's ultra-high sensitivity aerosol spectrometer (UHSAS) instrument and a new fast mobility spectrometer. The fast mobility spectrometer consists of a new high-flow dual channel differential mobility

  8. Coastal Research Imaging Spectrometer

    NASA Technical Reports Server (NTRS)

    Lucey, Paul G.; Williams, Timothy; Horton, Keith A.

    2004-01-01

    The Coastal Research Imaging Spectrometer (CRIS) is an airborne remote sensing system designed specifically for research on the physical, chemical, and biological characteristics of coastal waters. The CRIS includes a visible-light hyperspectral imaging subsystem for measuring the color of water, which contains information on the biota, sediment, and nutrient contents of the water. The CRIS also includes an infrared imaging subsystem, which provides information on the temperature of the water. The combination of measurements enables investigation of biological effects of both natural and artificial flows of water from land into the ocean, including diffuse and point-source flows that may contain biological and/or chemical pollutants. Temperature is an important element of such measurements because temperature contrasts can often be used to distinguish among flows from different sources: for example, a sewage outflow could manifest itself in spectral images as a local high-temperature anomaly. Both the visible and infrared subsystems scan in pushbroom mode: that is, an aircraft carrying the system moves along a ground track, the system is aimed downward, and image data are acquired in across-track linear arrays of pixels. Both subsystems operate at a frame rate of 30 Hz. The infrared and visible-light optics are adjusted so that both subsystems are aimed at the same moving swath, which has across-track angular width of 15 . Data from the infrared and visible imaging subsystems are stored in the same file along with aircraft- position data acquired by a Global Positioning System receiver. The combination of the three sets of data is used to construct infrared and hyperspectral maps of scanned areas (see figure). The visible subsystem is based on a grating spectrograph and a rapid-readout charge-coupled-device camera. Images of the swatch are acquired in 256 spectral bands at wavelengths from 400 to 800 nm. The infrared subsystem, which is sensitive in a single

  9. In vivo genome editing using Staphylococcus aureus Cas9

    PubMed Central

    Ran, F. Ann; Cong, Le; Yan, Winston X.; Scott, David A.; Gootenberg, Jonathan S.; Kriz, Andrea J.; Zetsche, Bernd; Shalem, Ophir; Wu, Xuebing; Makarova, Kira S.; Koonin, Eugene; Sharp, Phillip A.; Zhang, Feng

    2015-01-01

    The RNA-guided endonuclease Cas9 has emerged as a versatile genome-editing platform. However, the size of the commonly used Cas9 from Streptococcus pyogenes (SpCas9) limits its utility for basic research and therapeutic applications that employ the highly versatile adeno-associated virus (AAV) delivery vehicle. Here, we characterize six smaller Cas9 orthologs and show that Cas9 from Staphylococcus aureus (SaCas9) can edit the genome with efficiencies similar to those of SpCas9, while being >1kb shorter. We packaged SaCas9 and its sgRNA expression cassette into a single AAV vector and targeted the cholesterol regulatory gene Pcsk9 in the mouse liver. Within one week of injection, we observed >40% gene modification, accompanied by significant reductions in serum Pcsk9 and total cholesterol levels. We further demonstrate the power of using BLESS to assess the genome-wide targeting specificity of SaCas9 and SpCas9, and show that SaCas9 can mediate genome editing in vivo with high specificity. PMID:25830891

  10. Structure and Engineering of Francisella novicida Cas9

    PubMed Central

    Hirano, Hisato; Gootenberg, Jonathan S.; Horii, Takuro; Abudayyeh, Omar O.; Kimura, Mika; Hsu, Patrick D.; Nakane, Takanori; Ishitani, Ryuichiro; Hatada, Izuho; Zhang, Feng; Nishimasu, Hiroshi; Nureki, Osamu

    2016-01-01

    Summary The RNA-guided endonuclease Cas9 cleaves double-stranded DNA targets complementary to the guide RNA, and has been applied to programmable genome editing. Cas9-mediated cleavage requires a protospacer adjacent motif (PAM) juxtaposed with the DNA target sequence, thus constricting the range of targetable sites. Here, we report the 1.7 Å resolution crystal structures of Cas9 from Francisella novicida (FnCas9), one of the largest Cas9 orthologs, in complex with a guide RNA and its PAM-containing DNA targets. A structural comparison of FnCas9 with other Cas9 orthologs revealed striking conserved and divergent features among distantly related CRISPR-Cas9 systems. We found that FnCas9 recognizes the 5′-NGG-3′ PAM, and used the structural information to create a variant that can recognize the more relaxed 5′-YG-3′ PAM. Furthermore, we demonstrated that pre-assembled FnCas9 ribonucleoprotein complexes can be microinjected into mouse zygotes to edit endogenous sites with the 5′-YG-3′ PAMs, thus expanding the target space of the CRISPR-Cas9 toolbox. PMID:26875867

  11. Field Studies of Broadband Aerosol Optical Extinction in the Ultraviolet Spectral Region

    NASA Astrophysics Data System (ADS)

    Washenfelder, R. A.; Attwood, A.; Brock, C. A.; Brown, S. S.

    2013-12-01

    Aerosols influence the Earth's radiative budget by scattering and absorbing incoming solar radiation. The optical properties of aerosols vary as a function of wavelength, but few measurements have reported the wavelength dependence of aerosol extinction cross sections and complex refractive indices. In the case of brown carbon, its wavelength-dependent absorption in the ultraviolet spectral region has been suggested as an important component of aerosol radiative forcing. We describe a new field instrument to measure aerosol optical extinction as a function of wavelength, using cavity enhanced spectroscopy with a broadband light source. The instrument consists of two broadband channels which span the 360-390 and 385-420 nm spectral regions using two light emitting diodes (LED) and a grating spectrometer with charge-coupled device (CCD) detector. We deployed this instrument during the Fire Lab at Missoula Experiment during Fall 2012 to measure biomass burning aerosol, and again during the Southern Oxidant and Aerosol Study in summer 2013 to measure organic aerosol in the Southeastern U.S. In both field experiments, we determined aerosol optical extinction as a function of wavelength and can interpret this together with size distribution and composition measurements to characterize the aerosol optical properties and radiative forcing.

  12. Complete chemical analysis of aerosol particles in real-time

    SciTech Connect

    Yang, Mo; Reilly, P.T.A.; Gieray, R.A.; Whitten, W.B.; Ramsey, J.M.

    1996-12-31

    Real-time mass spectrometry of individual aerosol particles using an ion trap mass spectrometer is described. The microparticles are sampled directly from the air by a particle inlet system into the vacuum chamber. An incoming particle is detected as it passes through two CW laser beams and a pulsed laser is triggered to intercept the particle for laser ablation ionization at the center of the ion trap. The produced ions are analyzed by the ion trap mass spectrometer. Ions of interest are selected and dissociated through collision with buffer gas atoms for further fragmentation analysis. Real-time chemical analyses of inorganic, organic, and bacterial aerosol articles have been demonstrated. It has been confirmed that the velocity and the size of the incoming particles highly correlate to each other. The performance of the inlet system, particle detection, and preliminary results are discussed.

  13. Overview of Aerosol Distribution

    NASA Technical Reports Server (NTRS)

    Kaufman, Yoram

    2005-01-01

    Our knowledge of atmospheric aerosols (smoke, pollution, dust or sea salt particles, small enough to be suspended in the air), their evolution, composition, variability in space and time and interaction with clouds and precipitation is still lacking despite decades of research. Understanding the global aerosol system is fundamental for progress in climate change and hydrological cycle research. While a single instrument was used to demonstrate 50 years ago that the global CO2 levels are rising, posing threat of global warming, we need an array of satellites and field measurements coupled with chemical transport models to understand the global aerosol system. This complexity of the aerosol problem results from their short lifetime (1 week) and variable chemical composition. A new generation of satellites provides exciting opportunities to measure the global distribution of aerosols, distinguishing natural from anthropogenic aerosol and measuring their interaction with clouds and climate. I shall discuss these topics and application of the data to air quality monitoring.

  14. Modeling aerosols and their interactions with shallow cumuli during the 2007 CHAPS field study

    SciTech Connect

    Shrivastava, ManishKumar B.; Berg, Larry K.; Fast, Jerome D.; Easter, Richard C.; Laskin, Alexander; Chapman, Elaine G.; Gustafson, William I.; Liu, Ying; Berkowitz, Carl M.

    2013-02-07

    The Weather Research and Forecasting model coupled with chemistry (WRF-Chem) is used to simulate relationships between aerosols and clouds in the vicinity of Oklahoma City during the June 2007 Cumulus Humilis Aerosol Processing Study (CHAPS). The regional scale simulation completed using 2 km horizontal grid spacing evaluates four important relationships between aerosols and shallow cumulus clouds observed during CHAPS. First, the model reproduces the trends of higher nitrate volume fractions in cloud droplet residuals compared to interstitial non-activated aerosols, as measured using the Aerosol Mass Spectrometer. Comparing simulations with cloud chemistry turned on and off, we show that nitric acid vapor uptake by cloud droplets explains the higher nitrate content of cloud droplet residuals. Second, as documented using an offline code, both aerosol water and other inorganics (OIN), which are related to dust and crustal emissions, significantly affect predicted aerosol optical properties. Reducing the OIN content of wet aerosols by 50% significantly improves agreement of model predictions with measurements of aerosol optical properties. Third, the simulated hygroscopicity of aerosols is too high as compared to their hygroscopicity derived from cloud condensation nuclei and particle size distribution measurements, indicating uncertainties associated with simulating size-dependent chemical composition and treatment of aerosol mixing state within the model. Fourth, the model reasonably represents the observations of the first aerosol indirect effect where pollutants in the vicinity of Oklahoma City increase cloud droplet number concentrations and decrease the droplet effective radius. While previous studies have often focused on cloud-aerosol interactions in stratiform and deep convective clouds, this study highlights the ability of regional-scale models to represent some of the important aspects of cloud-aerosol interactions associated with fields of short

  15. Chemical, physical, and optical evolution of biomass burning aerosols: a case study

    NASA Astrophysics Data System (ADS)

    Adler, G.; Flores, J. M.; Abo Riziq, A.; Borrmann, S.; Rudich, Y.

    2011-02-01

    In-situ chemical composition measurements of ambient aerosols have been used for characterizing the evolution of submicron aerosols from a large anthropogenic biomass burning (BB) event in Israel. A high resolution Time of Flight Aerosol Mass Spectrometer (HR-RES-TOF-AMS) was used to follow the chemical evolution of BB aerosols during a night-long, extensive nationwide wood burning event and during the following day. While these types of extensive BB events are not common in this region, burning of agricultural waste is a common practice. The aging process of the BB aerosols was followed through their chemical, physical and optical properties. Mass spectrometric analysis of the aerosol organic component showed that aerosol aging is characterized by shifting from less oxidized fresh BB aerosols to more oxidized aerosols. Evidence for aerosol aging during the day following the BB event was indicated by an increase in the organic mass, its oxidation state, the total aerosol concentration, and a shift in the modal particle diameter. The effective broadband refractive index (EBRI) was derived using a white light optical particle counter (WELAS). The average EBRI for a mixed population of aerosols dominated by open fires was m = 1.53(±0.03) + 0.07i(±0.03), during the smoldering phase of the fires we found the EBRI to be m = 1.54(±0.01) + 0.04i(±0.01) compared to m = 1.49(±0.01) + 0.02i(±0.01) of the aged aerosols during the following day. This change indicates a decrease in the overall aerosol absorption and scattering. Elevated levels of particulate Polycyclic Aromatic Hydrocarbons (PAHs) were detected during the entire event, which suggest possible implications for human health during such extensive event.

  16. Aerosol, radiation, and climate

    NASA Technical Reports Server (NTRS)

    Pollack, J. B.

    1983-01-01

    Airborne, spaceborne, and ground-based measurements are used to study the radiative and climatic effects of aerosols. The data, which are modelled with a hierarchy of radiation and climate models, and their implications are summarized. Consideration is given to volcanic aerosols, polar stratospheric clouds, and the Arctic haze. It is shown that several types of aerosols (volcanic particles and the Arctic haze) cause significant alterations to the radiation budget of the regions where they are located.

  17. Radiative Effects of Aerosols

    NASA Technical Reports Server (NTRS)

    Valero, Francisco P. J.

    1997-01-01

    During the Atlantic Stratocumulus Transition Experiment (ASTEX) in June 1992, two descents in cloud-free regions allowed comparison of the change in aerosol optical depth as determined by an onboard total-direct-diffuse radiometer (TDDR) to the change calculated from measured size resolved aerosol microphysics and chemistry. Both profiles included pollution haze layer from Europe but the second also included the effect of a Saharan dust layer above the haze. The separate contributions of supermicrometer (coarse) and submicrometer (fine) aerosol were determined and thermal analysis of the pollution haze indicated that the fine aerosol was composed primarily of a sulfate/water mixture with a refractory soot-like core.

  18. Measurements of the aerosol chemical composition and mixing state in the Po Valley using multiple spectroscopic techniques

    NASA Astrophysics Data System (ADS)

    Decesari, S.; Allan, J.; Plass-Duelmer, C.; Williams, B. J.; Paglione, M.; Facchini, M. C.; O'Dowd, C.; Harrison, R. M.; Gietl, J. K.; Coe, H.; Giulianelli, L.; Gobbi, G. P.; Lanconelli, C.; Carbone, C.; Worsnop, D.; Lambe, A. T.; Ahern, A. T.; Moretti, F.; Tagliavini, E.; Elste, T.; Gilde, S.; Zhang, Y.; Dall'Osto, M.

    2014-04-01

    The use of co-located multiple spectroscopic techniques can provide detailed information on the atmospheric processes regulating aerosol chemical composition and mixing state. So far, field campaigns heavily equipped with aerosol mass spectrometers have been carried out mainly in large conurbations and in areas directly affected by their outflow, whereas lesser efforts have been dedicated to continental areas characterized by a less dense urbanization. We present here the results obtained in San Pietro Capofiume, which is located in a sparsely inhabited sector of the Po Valley, Italy. The experiment was carried out in summer 2009 in the framework of the EUCAARI project ("European Integrated Project on Aerosol, Cloud Climate Aerosol Interaction"). For the first time in Europe, six state-of-the-art techniques were used in parallel: (1) on-line TSI aerosol time-of-flight mass spectrometer (ATOFMS), (2) on-line Aerodyne high-resolution time-of-flight aerosol mass spectrometer (HR-TOF-AMS), (3) soot particle aerosol mass spectrometer (SP-AMS), (4) on-line high resolution time-of-flight mass spectrometer-thermal desorption aerosol gas chromatograph (HR-ToFMS-TAG), (5) off-line twelve-hour resolution proton nuclear magnetic resonance (H-NMR) spectroscopy, and (6) chemical ionization mass spectrometry (CIMS) for the analysis of gas-phase precursors of secondary aerosol. Data from each aerosol spectroscopic method were analysed individually following ad-hoc tools (i.e. PMF for AMS, Art-2a for ATOFMS). The results obtained from each techniques are herein presented and compared. This allows us to clearly link the modifications in aerosol chemical composition to transitions in air mass origin and meteorological regimes. Under stagnant conditions, atmospheric stratification at night and early morning hours led to the accumulation of aerosols produced by anthropogenic sources distributed over the Po Valley plain. Such aerosols include primary components such as black carbon (BC

  19. Climatology of aerosol optical properties near the New England coast: preparation for the Two Column Aerosol Program (TCAP) field campaign

    NASA Astrophysics Data System (ADS)

    Berkowitz, C. M.; Chand, D.; Berg, L.; Kassianov, E.; Chapman, E.

    2011-12-01

    A key objective of the U.S. Department of Energy's Two Column Aerosol Project (TCAP) is to provide observations with which to evaluate the uncertainty in model simulations of aerosol optical depth (AOD) and their relation to estimates of aerosol radiative forcing and hence, to climate. To meet this objective, detailed ground-based aerosol measurements will be made via deployment of the ARM Mobile Facility (AMF) and the Mobile Aerosol Observing System (MAOS) at Cape Cod, Massachusetts for a 12-month period starting in the summer of 2012. These measurements will be supported by two scheduled aircraft campaigns using the ARM Aerial Facility's (AAF) G-1 aircraft and the NASA B-200 aircraft in July 2012 and again in February 2013. Each campaign will include sampling within two atmospheric columns using the aircrafts; one column will be located directly over, or very close to, Cape Cod, while the second will be over a relatively remote maritime location. This preliminary study presented here is designed to select the optimum location of the second, remote maritime atmospheric column using the mean and standard deviation of previously observed AODs from surface and space. An area with the large variability in AOD will be considered as a potential location for evaluation of the outputs from atmospheric models. In this study, we present regional climatological values of (1) AOD from the Moderate Resolution Imaging Spectrometer (MODIS) on Terra and Aqua satellite platforms; (2) single scattering albedo from the Multi-angle Imaging SpectroRadiometer (MISR) satellite; (3) the vertical distribution of aerosol layers from the Cloud Aerosol Lidar and Infrared Pathfinder Satellite Observation (CALIPSO) satellite; and (4) the long term aerosol optical properties from the Aerosol Robotic Network (AERONET) surface sunphotometer at Martha's Vineyard, MA. Seasonal and geographical variations in these quantities will be analyzed and possible explanations will be presented based on

  20. Light absorption by secondary organic aerosol from α-pinene: Effects of oxidants, seed aerosol acidity, and relative humidity

    SciTech Connect

    Song, Chen; Gyawali, Madhu; Zaveri, Rahul A.; Shilling, John E.; Arnott, W. Patrick

    2013-10-25

    It is well known that light absorption from dust and black carbon aerosols has a warming effect on climate while light scattering from sulfate, nitrate, and sea salt aerosols has a cooling effect. However, there are large uncertainties associated with light absorption and scattering by different types of organic aerosols, especially in the near-UV and UV spectral regions. In this paper, we present the results from a systematic laboratory study focused on measuring light absorption by secondary organic aerosols (SOAs) generated from dark α-pinene + O3 and α-pinene + NOx + O3 systems in the presence of neutral and acidic sulfate seed aerosols. Light absorption was monitored using photoacoustic spectrometers at four different wavelengths: 355, 405, 532, and 870 nm. Significant light absorption at 355 and 405 nm was observed for the SOA formed from α-pinene + O3 + NO3 system only in the presence of highly acidic sulfate seed aerosols under dry conditions. In contrast, no absorption was observed when the relative humidity was elevated to greater than 27% or in the presence of neutral sulfate seed aerosols. Organic nitrates in the SOA formed in the presence of neutral sulfate seed aerosols were found to be nonabsorbing, while the light-absorbing compounds are speculated to be aldol condensation oligomers with nitroxy organosulfate groups that are formed in highly acidic sulfate aerosols. Finally and overall, these results suggest that dark α-pinene + O3 and α-pinene + NOx + O3 systems do not form light-absorbing SOA under typical atmospheric conditions.

  1. Atmospheric Ion-induced Aerosol Nucleation

    NASA Astrophysics Data System (ADS)

    Curtius, J.; Lovejoy, E. R.; Froyd, K. D.

    2006-08-01

    Ion-induced nucleation has been suggested to be a potentially important mechanism for atmospheric aerosol formation. Ions are formed in the background atmosphere by galactic cosmic rays. A possible connection between galactic cosmic rays and cloudiness has been However, the predictions of current atmospheric nucleation models are highly uncertain because the models are usually based on the liquid drop model that estimates cluster thermodynamics based on bulk properties (e.g., liquid drop density and surface tension). Sulfuric acid (H2SO4) and water are assumed to be the most important nucleating agents in the free troposphere. Measurements of the molecular thermodynamics for the growth and evaporation of cluster ions containing H2SO4 and H2O were performed using a temperature-controlled laminar flow reactor coupled to a linear quadrupole mass spectrometer as well as a temperature-controlled ion trap mass spectrometer. The measurements were complemented by quantum chemical calculations of the cluster ion structures. The analysis yielded a complete set of H2SO4 and H2O binding thermodynamics extending from molecular cluster ions to the bulk, based on experimental thermodynamics for the small clusters. The data were incorporated into a kinetic aerosol model to yield quantitative predictions of the rate of ion-induced nucleation for atmospheric conditions. The model predicts that the negative ion-H2SO4-H2O nucleation mechanism is an efficient source of new particles in the middle and upper troposphere.

  2. Investigating vertical distributions of ozone and of the aerosol extinction coefficient in the middle atmosphere with the MKS-M and SFN-4 instruments on board Salyut-7

    NASA Astrophysics Data System (ADS)

    Badaev, V. V.; Grechko, G. M.; Elanskii, N. F.; Kan, V.; Plotkin, M. E.

    1989-04-01

    The technical characteristics of the multichannel spectrometer (MKS-M) system combined with a camera containing a spectrophotography attachment (SFN-4) are discussed together with results obtained by this system on distributions of ozone and aerosol in the middle atmosphere. It is demonstrated that this system is capable of retrieving the fine structure of vertical ozone and aerosol extinction distributions in the lower stratosphere. Results show that, in the ozonosphere, the contents of ozone and of aerosol exhibit a negative correlation.

  3. Spectrometer for Sky-Scanning Sun-Tracking Atmospheric Research (4STAR): Instrument Technology

    SciTech Connect

    Dunagan, Stephen; Johnson, Roy; Zavaleta, Jhony; Russell, P. B.; Schmid, Beat; Flynn, Connor J.; Redemann, Jens; Shinozuka, Yohei; Livingston, J.; Segal Rozenhaimer, Michal

    2013-08-06

    The Spectrometer for Sky-Scanning, Sun-Tracking Atmospheric Research (4STAR) combines airborne sun tracking and sky scanning with diffraction spectroscopy, to improve knowledge of atmospheric constituents and their links to air-pollution/climate. Direct beam hyper-spectral measurement of optical depth improves retrievals of gas constituents and determination of aerosol properties. Sky scanning enhances retrievals of aerosol type and size distribution. 4STAR measurements will tighten the closure between satellite and ground-based measurements. 4STAR incorporates a modular sun-tracking/ sky-scanning optical head with fiber optic signal transmission to rack mounted spectrometers, permitting miniaturization of the external optical head, and future detector evolution. Technical challenges include compact optical collector design, radiometric dynamic range and stability, and broad spectral coverage. Test results establishing the performance of the instrument against the full range of operational requirements are presented, along with calibration, engineering flight test, and scientific field campaign data and results.

  4. Aerosol optical properties variations over the southern and northern slopes of the Himalayas

    NASA Astrophysics Data System (ADS)

    Xu, Chao; Ma, Yaoming; Yang, Kun; Qin, Jun; Zhu, Zhikun

    2013-04-01

    The Himalayas is the highest mountain on the earth. It blocks off the aerosols obviously, especially during the monsoon seasons. The aerosol optical properties derived from Aerosol Robotic Network (AERONET) dataset over the southern (Pokhara station in Nepal and EVK2-CNR station in Nepal) and northern (Qomolangma(Mt. Everest) station (QOMS_CAS) in Tibet, China) slopes of the Himalayas are analyzed in this study. The low aerosol optical depth (AOD) at QOMS_CAS and EVK2-CNR indicates they are background sites in Himalaya regions. AOD at Pokhara is much higher than the former two sites with a seasonal variation pattern. This is maybe because Pokhara is more influenced by human activities and India summer monsoon. There are both fine and coarse particle mode aerosol in all three sites. Diurnal variation of AOD and Ångström exponent (AE) has a wide range at all three stations. QOMS_CAS mostly influenced by distant sources reveals AOD has no diurnal cycle in all seasons. Simultaneously, there are smaller particles in the morning and late afternoon, however, particles are larger at noon. The diurnal variation at Pokhara shows a higher AOD value in the morning and late afternoon, and reaches its minimum at noon except JJA (June to August). In all seasons, AOD at EVK2-CNR increases continuously during a day, and reaches maximum at late afternoon due to evolution of mountain-valley flows. AE indicating the particle size has no fixed mode at Pokhara and EVK2-CNR. The aerosols in the northern slope are mostly from distinct regions, and transport from the upper troposphere to atmospheric boundary layer (ABL) probably. The changes of ABL make no apparent effect on aerosol daytime variation. Conversely, the aerosols in the southern slope are mostly from local regions, and maybe spread upwards from the ground gradually. Atmospheric mixing layer height changes with the evolution of the ABL, which diffuses aerosols in the troposphere. Therefore, this process leads aerosol daytime

  5. Aerosol Angstrom Absorption Coefficient Comparisons during MILAGRO.

    NASA Astrophysics Data System (ADS)

    Marley, N. A.; Marchany-Rivera, A.; Kelley, K. L.; Mangu, A.; Gaffney, J. S.

    2007-12-01

    Measurements of aerosol absorption were obtained as part of the MAX-Mex component of the MILAGRO field campaign at site T0 (Instituto Mexicano de Petroleo in Mexico City) by using a 7-channel aethalometer (Thermo- Anderson) during the month of March, 2006. The absorption measurements obtained in the field at 370, 470, 520, 590, 660, 880, and 950 nm were used to determine the aerosol Angstrom absorption exponents by linear regression. Since, unlike other absorbing aerosol species (e.g. humic like substances, nitrated PAHs), black carbon absorption is relatively constant from the ultraviolet to the infrared with an Angstrom absorption exponent of -1 (1), a comparison of the Angstrom exponents can indicate the presence of aerosol components with an enhanced UV absorption over that expected from BC content alone. The Angstrom exponents determined from the aerosol absorption measurements obtained in the field varied from - 0.7 to - 1.3 during the study and was generally lower in the afternoon than the morning hours, indicating an increase in secondary aerosol formation and photochemically generated UV absorbing species in the afternoon. Twelve-hour integrated samples of fine atmospheric aerosols (<0.1micron) were also collected at site T0 and T1 (Universidad Technologica de Tecamac, State of Mexico) from 5 am to 5 pm (day) and from 5 pm to 5 am (night) during the month of March 2006. Samples were collected on quartz fiber filters with high volume impactor samplers. Continuous absorption spectra of these aerosol samples have been obtained in the laboratory from 280 to 900nm with the use of an integrating sphere coupled to a UV spectrometer (Beckman DU with a Labsphere accessory). The integrating sphere allows the detector to collect and spatially integrate the total radiant flux reflected from the sample and therefore allows for the measurement of absorption on highly reflective or diffusely scattering samples. These continuous spectra have also been used to obtain the

  6. Spectral signatures of polar stratospheric clouds and sulfate aerosol

    SciTech Connect

    Massie, S.T.; Bailey, P.L.; Gille, J.C.; Lee, E.C.; Mergenthaler, J.L.; Roche, A.E.; Kumer, J.B.; Fishbein, E.F.; Waters, J.W.; Lahoz, W.A.

    1994-10-15

    Multiwavelength observations of Antarctic and midlatitude aerosol by the Cryogenic Limb Array Etalon Spectrometer (CLAES) experiment on the Upper Atmosphere Research Satellite are used to demonstrate a technique that identifies the location of polar stratospheric clouds. The technique discussed uses the normalized area of the triangle formed by the aerosol extinctions at 925, 1257, and 1605 cm{sup {minus}1} (10.8, 8.0, and 6.2 {mu}m) to derive a spectral aerosol measure M of the aerosol spectrum. Mie calculations for spherical particles and T-matrix calculations for spheroidal particles are used to generate theoretical spectral extinction curves for sulfate and polar stratospheric cloud particles. The values of the spectral aerosol measure M for the sulfate and polar stratospheric cloud particles are shown to be different. Aerosol extinction data, corresponding to temperatures between 180 and 220 K at a pressure of 46 hPa (near 21-km altitude) for 18 August 1992, are used to demonstrate the technique. Thermodynamic calculations, based upon frost-point calculation and laboratory phase-equilibrium studies of nitric acid trihydrate, are used to predict the location of nitric acid trihydrate cloud particles. 47 refs., 22 figs., 3 tabs.

  7. Spectral signatures of polar stratospheric clouds and sulfate aerosol

    NASA Technical Reports Server (NTRS)

    Massie, S. T.; Bailey, P. L.; Gille, J. C.; Lee, E. C.; Mergenthaler, J. L.; Roche, A. E.; Kumer, J. B.; Fishbein, E. F.; Waters, J. W.; Lahoz, W. A.

    1994-01-01

    Multiwavelength observations of Antarctic and midlatitude aerosol by the Cryogenic Limb Array Etalon Spectrometer (CLAES) experiment on the Upper Atmosphere Research Satellite (UARS) are used to demonstrate a technique that identifies the location of polar stratospheric clouds. The technique discussed uses the normalized area of the triangle formed by the aerosol extinctions at 925, 1257, and 1605/cm (10.8, 8.0, and 6.2 micrometers) to derive a spectral aerosol measure M of the aerosol spectrum. Mie calculations for spherical particles and T-matrix calculations for spheriodal particles are used to generate theoretical spectral extinction curves for sulfate and polar stratospheric cloud particles. The values of the spectral aerosol measure M for the sulfate and polar stratospheric cloud particles are shown to be different. Aerosol extinction data, corresponding to temperatures between 180 and 220 K at a pressure of 46 hPa (near 21-km altitude) for 18 August 1992, are used to demonstrate the technique. Thermodynamic calculations, based upon frost-point calculations and laboratory phase-equilibrium studies of nitric acid trihydrate, are used to predict the location of nitric acid trihydrate cloud particles.

  8. Resolution-enhanced Mapping Spectrometer

    NASA Technical Reports Server (NTRS)

    Kumer, J. B.; Aubrun, J. N.; Rosenberg, W. J.; Roche, A. E.

    1993-01-01

    A familiar mapping spectrometer implementation utilizes two dimensional detector arrays with spectral dispersion along one direction and spatial along the other. Spectral images are formed by spatially scanning across the scene (i.e., push-broom scanning). For imaging grating and prism spectrometers, the slit is perpendicular to the spatial scan direction. For spectrometers utilizing linearly variable focal-plane-mounted filters the spatial scan direction is perpendicular to the direction of spectral variation. These spectrometers share the common limitation that the number of spectral resolution elements is given by the number of pixels along the spectral (or dispersive) direction. Resolution enhancement by first passing the light input to the spectrometer through a scanned etalon or Michelson is discussed. Thus, while a detector element is scanned through a spatial resolution element of the scene, it is also temporally sampled. The analysis for all the pixels in the dispersive direction is addressed. Several specific examples are discussed. The alternate use of a Michelson for the same enhancement purpose is also discussed. Suitable for weight constrained deep space missions, hardware systems were developed including actuators, sensor, and electronics such that low-resolution etalons with performance required for implementation would weigh less than one pound.

  9. Ultra Compact Imaging Spectrometer (UCIS)

    NASA Astrophysics Data System (ADS)

    Blaney, Diana L.; Green, Robert; Mouroulis, Pantazis; Cable, Morgan; Ehlmann, Bethany; Haag, Justin; Lamborn, Andrew; McKinley, Ian; Rodriguez, Jose; van Gorp, Byron

    2016-10-01

    The Ultra Compact Imaging Spectrometer (UCIS) is a modular visible to short wavelength infrared imaging spectrometer architecture which could be adapted to a variety of mission concepts requiring low mass and low power. Imaging spectroscopy is an established technique to address complex questions of geologic evolution by mapping diagnostic absorption features due to minerals, organics, and volatiles throughout our solar system. At the core of UCIS is an Offner imaging spectrometer using M3 heritage and a miniature pulse tube cryo-cooler developed under the NASA Maturation of Instruments for Solar System Exploration (MatISSE) program to cool the focal plane array. The TRL 6 integrated spectrometer and cryo-cooler provide a basic imaging spectrometer capability that is used with a variety of fore optics to address lunar, mars, and small body science goals. Potential configurations include: remote sensing from small orbiters and flyby spacecraft; in situ panoramic imaging spectroscopy; and in situ micro-spectroscopy. A micro-spectroscopy front end is being developed using MatISSE funding with integration and testing planned this summer.

  10. On-chip random spectrometer

    NASA Astrophysics Data System (ADS)

    Redding, B.; Liew, S. F.; Sarma, R.; Cao, H.

    2014-05-01

    Spectrometers are widely used tools in chemical and biological sensing, material analysis, and light source characterization. The development of a high-resolution on-chip spectrometer could enable compact, low-cost spectroscopy for portable sensing as well as increasing lab-on-a-chip functionality. However, the spectral resolution of traditional grating-based spectrometers scales with the optical pathlength, which translates to the linear dimension or footprint of the system, which is limited on-chip. In this work, we utilize multiple scattering in a random photonic structure fabricated on a silicon chip to fold the optical path, making the effective pathlength much longer than the linear dimension of the system and enabling high spectral resolution with a small footprint. Of course, the random spectrometer also requires a different operating paradigm, since different wavelengths are not spatially separated by the random structure, as they would be by a grating. Instead, light transmitted through the random structure produces a wavelengthdependent speckle pattern which can be used as a fingerprint to identify the input spectra after calibration. In practice, these wavelength-dependent speckle patterns are experimentally measured and stored in a transmission matrix, which describes the spectral-to-spatial mapping of the spectrometer. After calibrating the transmission matrix, an arbitrary input spectrum can be reconstructed from its speckle pattern. We achieved sub-nm resolution with 25 nm bandwidth at a wavelength of 1500 nm using a scattering medium with largest dimension of merely 50 μm.

  11. Vertical Transport of Aerosol Particles across Mountain Topography near the Los Angeles Basin

    NASA Astrophysics Data System (ADS)

    Murray, J. J.; Schill, S.; Freeman, S.; Bertram, T. H.; Lefer, B. L.

    2015-12-01

    Transport of aerosol particles is known to affect air quality and is largely dependent on the characteristic topography of the surrounding region. To characterize this transport, aerosol number distributions were collected with an Ultra-High Sensitivity Aerosol Spectrometer (UHSAS, DMT) during the 2015 NASA Student Airborne Research Program (SARP) in and around the Los Angeles Basin in Southern California. Increases in particle number concentration and size were observed over mountainous terrain north of Los Angeles County. Chemical analysis and meteorological lagrangian trajectories suggest orographic lifting processes, known as the "chimney effect". Implications for spatial transport and distribution will be discussed.

  12. Protein engineering of Cas9 for enhanced function.

    PubMed

    Oakes, Benjamin L; Nadler, Dana C; Savage, David F

    2014-01-01

    CRISPR/Cas systems act to protect the cell from invading nucleic acids in many bacteria and archaea. The bacterial immune protein Cas9 is a component of one of these CRISPR/Cas systems and has recently been adapted as a tool for genome editing. Cas9 is easily targeted to bind and cleave a DNA sequence via a complementary RNA; this straightforward programmability has gained Cas9 rapid acceptance in the field of genetic engineering. While this technology has developed quickly, a number of challenges regarding Cas9 specificity, efficiency, fusion protein function, and spatiotemporal control within the cell remain. In this work, we develop a platform for constructing novel proteins to address these open questions. We demonstrate methods to either screen or select active Cas9 mutants and use the screening technique to isolate functional Cas9 variants with a heterologous PDZ domain inserted within the protein. As a proof of concept, these methods lay the groundwork for the future construction of diverse Cas9 proteins. Straightforward and accessible techniques for genetic editing are helping to elucidate biology in new and exciting ways; a platform to engineer new functionalities into Cas9 will help forge the next generation of genome-modifying tools.

  13. Inhibition of CRISPR-Cas9 with Bacteriophage Proteins.

    PubMed

    Rauch, Benjamin J; Silvis, Melanie R; Hultquist, Judd F; Waters, Christopher S; McGregor, Michael J; Krogan, Nevan J; Bondy-Denomy, Joseph

    2017-01-12

    Bacterial CRISPR-Cas systems utilize sequence-specific RNA-guided nucleases to defend against bacteriophage infection. As a countermeasure, numerous phages are known that produce proteins to block the function of class 1 CRISPR-Cas systems. However, currently no proteins are known to inhibit the widely used class 2 CRISPR-Cas9 system. To find these inhibitors, we searched cas9-containing bacterial genomes for the co-existence of a CRISPR spacer and its target, a potential indicator for CRISPR inhibition. This analysis led to the discovery of four unique type II-A CRISPR-Cas9 inhibitor proteins encoded by Listeria monocytogenes prophages. More than half of L. monocytogenes strains with cas9 contain at least one prophage-encoded inhibitor, suggesting widespread CRISPR-Cas9 inactivation. Two of these inhibitors also blocked the widely used Streptococcus pyogenes Cas9 when assayed in Escherichia coli and human cells. These natural Cas9-specific "anti-CRISPRs" present tools that can be used to regulate the genome engineering activities of CRISPR-Cas9.

  14. Precision Targeted Mutagenesis via Cas9 Paired Nickases in Rice

    PubMed Central

    Mikami, Masafumi; Toki, Seiichi; Endo, Masaki

    2016-01-01

    Recent reports of CRISPR- (clustered regularly interspaced short palindromic repeats)/Cas9 (CRISPR-associated protein 9) mediated heritable mutagenesis in plants highlight the need for accuracy of the mutagenesis directed by this system. Off-target mutations are an important issue when considering functional gene analysis, as well as the molecular breeding of crop plants with large genome size, i.e. with many duplicated genes, and where the whole-genome sequence is still lacking. In mammals, off-target mutations can be suppressed by using Cas9 paired nickases together with paired guide RNAs (gRNAs). However, the performance of Cas9 paired nickases has not yet been fully assessed in plants. Here, we analyzed on- and off-target mutation frequency in rice calli and regenerated plants using Cas9 nuclease or Cas9 nickase with paired gRNAs. When Cas9 paired nickases were used, off-target mutations were fully suppressed in rice calli and regenerated plants. However, on-target mutation frequency also decreased compared with that induced by the Cas9 paired nucleases system. Since the gRNA sequence determines specific binding of Cas9 protein–gRNA ribonucleoproteins at the targeted sequence, the on-target mutation frequency of Cas9 paired nickases depends on the design of paired gRNAs. Our results suggest that a combination of gRNAs that can induce mutations at high efficiency with Cas9 nuclease should be used together with Cas9 nickase. Furthermore, we confirmed that a combination of gRNAs containing a one nucleotide (1 nt) mismatch toward the target sequence could not induce mutations when expressed with Cas9 nickase. Our results clearly show the effectiveness of Cas9 paired nickases in delivering on-target specific mutations. PMID:26936792

  15. Annotation and Classification of CRISPR-Cas Systems.

    PubMed

    Makarova, Kira S; Koonin, Eugene V

    2015-01-01

    The clustered regularly interspaced short palindromic repeats (CRISPR)-Cas (CRISPR-associated proteins) is a prokaryotic adaptive immune system that is represented in most archaea and many bacteria. Among the currently known prokaryotic defense systems, the CRISPR-Cas genomic loci show unprecedented complexity and diversity. Classification of CRISPR-Cas variants that would capture their evolutionary relationships to the maximum possible extent is essential for comparative genomic and functional characterization of this theoretically and practically important system of adaptive immunity. To this end, a multipronged approach has been developed that combines phylogenetic analysis of the conserved Cas proteins with comparison of gene repertoires and arrangements in CRISPR-Cas loci. This approach led to the current classification of CRISPR-Cas systems into three distinct types and ten subtypes for each of which signature genes have been identified. Comparative genomic analysis of the CRISPR-Cas systems in new archaeal and bacterial genomes performed over the 3 years elapsed since the development of this classification makes it clear that new types and subtypes of CRISPR-Cas need to be introduced. Moreover, this classification system captures only part of the complexity of CRISPR-Cas organization and evolution, due to the intrinsic modularity and evolutionary mobility of these immunity systems, resulting in numerous recombinant variants. Moreover, most of the cas genes evolve rapidly, complicating the family assignment for many Cas proteins and the use of family profiles for the recognition of CRISPR-Cas subtype signatures. Further progress in the comparative analysis of CRISPR-Cas systems requires integration of the most sensitive sequence comparison tools, protein structure comparison, and refined approaches for comparison of gene neighborhoods.

  16. Inter-Comparison of ILAS-II Version 1.4 Aerosol Extinction Coefficient at 780 nm with SAGE II, SAGE III, and POAM III Aerosol Data

    NASA Technical Reports Server (NTRS)

    Saitoh, Naoko; Hayashida, S.; Sugita, T.; Nakajima, H.; Yokota, T.; Hayashi, M.; Shiraishi, K.; Kanzawa, H.; Ejiri, M. K.; Irie, H.; Tanaka, T.; Terao, Y.; Kobayashi, H.; Sasano, Y.; Bevilacqua, R.; Randall, C.; Thomason, L.; Taha, G.

    2006-01-01

    The Improved Limb Atmospheric Spectrometer (ILAS) II on board the Advanced Earth Observing Satellite (ADEOS) II observed stratospheric aerosol in visible/near-infrared/infrared spectra over high latitudes in the Northern and Southern Hemispheres. Observations were taken intermittently from January to March, and continuously from April through October, 2003. We assessed the data quality of ILAS-II version 1.4 aerosol extinction coefficients at 780 nm from comparisons with the Stratospheric Aerosol and Gas Experiment (SAGE) II, SAGE III, and the Polar Ozone and Aerosol Measurement (POAM) III aerosol data. At heights below 20 km in the Northern Hemisphere, aerosol extinction coefficients from ILAS-II agreed with those from SAGE II and SAGE III within 10%, and with those from POAM III within 15%. From 20 to 26 km, ILAS-II aerosol extinction coefficients were smaller than extinction coefficients from the other sensors; differences between ILAS-II and SAGE II ranged from 10% at 20 km to 34% at 26 km. ILAS-II aerosol extinction coefficients from 20 to 25 km in February over the Southern Hemisphere had a negative bias (12-66%) relative to SAGE II aerosol data. The bias increased with increasing altitude. Comparisons between ILAS-II and POAM III aerosol extinction coefficients from January to May in the Southern Hemisphere (defined as the non-Polar Stratospheric Cloud (PSC) season ) yielded qualitatively similar results. From June to October (defined as the PSC season ), aerosol extinction coefficients from ILAS-II were smaller than those from POAM III above 17 km, as in the case of the non-PSC season; however, ILAS-II and POAM III aerosol data were within 15% of each other from 12 to 17 km.

  17. Comparison of LIDAR and Cavity Ring-Down Measurements of Aerosol Extinction and Study of Inferred Aerosol Gradients

    NASA Astrophysics Data System (ADS)

    Eberhard, W. L.; Massoli, P.; McCarty, B. J.; Machol, J. L.; Tucker, S. C.

    2007-12-01

    A LIDAR and a Cavity Ring-Down Aerosol Extinction Spectrometer (CRD) instrument simultaneously measured aerosol extinction at 355-nm wavelength from aboard the Research Vessel Ronald H. Brown during the Texas Air Quality Study II campaign. The CRD measured air sampled from the top of the common mast used by several in situ aerosol optical and chemical instruments. The LIDAR's scan sequence included near-horizontal stares (2° elevation angle) with pointing corrected for ship's roll. Aerosol extinction was retrieved using a variant of the slope method. The LIDAR therefore sampled air over a short vertical extent with midpoint higher above the surface than the CRD intake and at a horizontal distance of as much as a few kilometers. The CRD measured aerosol extinction at dry and at high (near-ambient) relative humidity (RH) levels, which were used to scale the measurements to ambient RH for the comparisons. Data from the two instruments for well-mixed conditions (supported by turbulence and atmospheric stability data) are compared to evaluate the degree of agreement between the two methods and reasons for differences. For instances of larger differences, the aerosol gradient below approximately 100 m altitude is inferred and examined in context of low-level meteorological parameters and LIDAR measurements at higher angles.

  18. Mini ion trap mass spectrometer

    DOEpatents

    Dietrich, D.D.; Keville, R.F.

    1995-09-19

    An ion trap is described which operates in the regime between research ion traps which can detect ions with a mass resolution of better than 1:10{sup 9} and commercial mass spectrometers requiring 10{sup 4} ions with resolutions of a few hundred. The power consumption is kept to a minimum by the use of permanent magnets and a novel electron gun design. By Fourier analyzing the ion cyclotron resonance signals induced in the trap electrodes, a complete mass spectra in a single combined structure can be detected. An attribute of the ion trap mass spectrometer is that overall system size is drastically reduced due to combining a unique electron source and mass analyzer/detector in a single device. This enables portable low power mass spectrometers for the detection of environmental pollutants or illicit substances, as well as sensors for on board diagnostics to monitor engine performance or for active feedback in any process involving exhausting waste products. 10 figs.

  19. Mini ion trap mass spectrometer

    DOEpatents

    Dietrich, Daniel D.; Keville, Robert F.

    1995-01-01

    An ion trap which operates in the regime between research ion traps which can detect ions with a mass resolution of better than 1:10.sup.9 and commercial mass spectrometers requiring 10.sup.4 ions with resolutions of a few hundred. The power consumption is kept to a minimum by the use of permanent magnets and a novel electron gun design. By Fourier analyzing the ion cyclotron resonance signals induced in the trap electrodes, a complete mass spectra in a single combined structure can be detected. An attribute of the ion trap mass spectrometer is that overall system size is drastically reduced due to combining a unique electron source and mass analyzer/detector in a single device. This enables portable low power mass spectrometers for the detection of environmental pollutants or illicit substances, as well as sensors for on board diagnostics to monitor engine performance or for active feedback in any process involving exhausting waste products.

  20. Mobile spectrometer measures radar backscatter

    NASA Technical Reports Server (NTRS)

    Gogineni, S.; Moore, R. K.; Onstott, R. G.; Kim, Y. S.; Bushnell, D.

    1984-01-01

    The present article is concerned with a helicopter-borne spectrometer (Heloscat), which has been developed to permit high-quality scattering measurements from a mobile platform at remote sites. The term 'spectrometer' referes to a class of scatterometers. The term 'scatterometer' is employed to denote a specialized radar for measuring scattering coefficients as a function of angle. A spectrometer, on the other hand, is a scatterometer which can measure backscatter at several frequencies. The Heloscat system is discussed, taking into account two antennas, RF hardware, and an externally mounted pendulum for angle encoding. A dual-antenna configuration is used for cross-polarized measurements, while a single-antenna system is used for like-polarized measurements. Attention is also given to oscillator characteristics, efficient data handling, and aspects of calibration.

  1. Aerosols and Clouds: In Cahoots to Change Climate

    ScienceCinema

    Berg, Larry

    2016-07-12

    Key knowledge gaps persist despite advances in the scientific understanding of how aerosols and clouds evolve and affect climate. The Two-Column Aerosol Project, or TCAP, was designed to provide a detailed set of observations to tackle this area of unknowns. Led by PNNL atmospheric scientist Larry Berg, ARM's Climate Research Facility was deployed in Cape Cod, Massachusetts for the 12-month duration of TCAP, which came to a close in June 2013. "We are developing new tools to look at particle chemistry, like our mass spectrometer used in TCAP that can tell us the individual chemical composition of an aerosol," said Berg. "Then, we'll run our models and compare it with the data that we have to make sure we're getting correct answers and make sure our climate models are reflecting the best information."

  2. Aerosols and Clouds: In Cahoots to Change Climate

    SciTech Connect

    Berg, Larry

    2014-03-29

    Key knowledge gaps persist despite advances in the scientific understanding of how aerosols and clouds evolve and affect climate. The Two-Column Aerosol Project, or TCAP, was designed to provide a detailed set of observations to tackle this area of unknowns. Led by PNNL atmospheric scientist Larry Berg, ARM's Climate Research Facility was deployed in Cape Cod, Massachusetts for the 12-month duration of TCAP, which came to a close in June 2013. "We are developing new tools to look at particle chemistry, like our mass spectrometer used in TCAP that can tell us the individual chemical composition of an aerosol," said Berg. "Then, we'll run our models and compare it with the data that we have to make sure we're getting correct answers and make sure our climate models are reflecting the best information."

  3. Infrared spectroscopy of sulfuric acid/water aerosols: Freezing characteristics

    NASA Astrophysics Data System (ADS)

    Clapp, M. L.; Niedziela, R. F.; Richwine, L. J.; Dransfield, T.; Miller, R. E.; Worsnop, D. R.

    1997-04-01

    A low-temperature flow cell has been used in conjunction with a Fourier transform infrared (FT-IR) spectrometer to study sulfuric acid/water aerosols. The aerosols were generated with a wide range of composition (28 to 85 wt%), including those characteristic of stratospheric sulfate aerosols, and studied over the temperature range from 240 K to 160 K. The particles exhibited deep supercooling, by as much as 100 K below the freezing point in some cases. Freezing of water ice was observed in the more dilute (<40 wt% sulfuric acid) particles, in agreement with the predictions of Jensen et al. and recent observations by Bertram et al. In contrast with theoretical predictions, however, the entire particle often does not immediately freeze, at least on the timescale of the present experiments (seconds to minutes). Freezing of the entire particle is observed at lower temperatures, well below that characteristic of the polar stratosphere.

  4. The GRAVITY spectrometers: mechanical design

    NASA Astrophysics Data System (ADS)

    Fischer, Sebastian; Wiest, Michael; Straubmeier, Christian; Yazici, Senol; Araujo-Hauck, Constanza; Eisenhauer, Frank; Perrin, Guy; Brandner, Wolfgang; Perraut, Karine; Amorim, Antonio; Schöller, Markus; Eckart, Andreas

    2010-07-01

    Operating on 6 interferometric baselines, i.e. using all 4 UTs, the 2nd generation VLTI instrument GRAVITY will deliver narrow angle astrometry with 10μas accuracy at the infrared K-band. Within the international GRAVITY consortium, the Cologne institute is responsible for the development and construction of the two spectrometers: one for the science object, and one for the fringe tracking object. Optically two individual components, both spectrometers are two separate units with their own housing and interfaces inside the vacuum vessel of GRAVITY. The general design of the spectrometers, however, is similar. The optical layout is separated into beam collimator (with integrated optics and metrology laser injection) and camera system (with detector, dispersive element, & Wollaston filter wheel). Mechanically, this transfers to two regions which are separated by a solid baffle wall incorporating the blocking filter for the metrology Laser wavelength. The optical subunits are mounted in individual rigid tubes which pay respect to the individual shape, size and thermal expansion of the lenses. For a minimized thermal background, the spectrometers are actively cooled down to an operating temperature of 80K in the ambient temperature environment of the GRAVITY vacuum dewar. The integrated optics beam combiner and the metrology laser injection, which are operated at 200/240K, are mounted thermally isolated to the cold housing of the spectrometers. The optical design has shown that the alignment of the detector is crucial to the performance of the spectrometers. Therefore, in addition to four wheel mechanisms, six cryogenic positioning mechanisms are included in the mechanical design of the detector mount.

  5. The GRAVITY spectrometers: thermal behaviour

    NASA Astrophysics Data System (ADS)

    Wank, Imke; Straubmeier, Christian; Wiest, Michael; Yazici, Senol; Fischer, Sebastian; Eisenhauer, Frank; Perrin, Guy S.; Perraut, Karine; Brandner, Wolfgang; Amorim, Antonio; Schöller, Markus; Eckart, Andreas

    2014-07-01

    GRAVITY is a 2nd generation VLTI Instrument o which operates on 6 interferometric baselines by using all 4 Unit Telescopes. It will deliver narrow angle astrometry with 10μas accuracy at the infrared K-band. At the 1. Physikalische Institut of the University of Cologne, which is part of the international GRAVITY consortium, two spectrometers, one for the sciene object, and one for the fringe tracking object, have been designed, manufactured and tested. These spectrometers are two individual devices, each with own housing and interfaces. For a minimized thermal background, the spectrometers are actively cooled down to an operating temperature of 80K in the ambient temperature environment of the Beam Combiner Instrument (BCI) cryostat. The outer casings are mounted thermal isolated to the base plate by glass fiber reinforced plastic (GRP) stands, copper cooling structures conduct the cold inside the spectrometers where it is routed to components via Cu cooling stripes. The spectrometers are covered with shells made of multi insulation foil. There will be shown and compared 3 cooling installations: setups in the Cologne test dewar, in the BCI dewar and in a mock-up cad model. There are some striking differences between the setup in the 2 different dewars. In the Cologne Test dewar the spectrometers are connected to the coldplate (80K); a Cu cooling structure and the thermal isolating GRP stands are bolted to the coldplate. In the BCI dewer Cu cooling structure is connected to the bottom of the nitrogen tank (80K), the GRP stands are bolted to the base plate (240K). The period of time during the cooldown process will be analyzed.

  6. Validation of MODIS Aerosol Retrieval over the Ocean during CLAMS

    NASA Astrophysics Data System (ADS)

    Levy, R. C.; Remer, L. A.; Martins, J. V.; Fattori, A. P.; Holben, B. N.; Redemann, J.; Russell, P.; Schuster, G. L.; Rodriquez, W. J.; Rutledge, K.; Kleidman, R.; Kaufman, Y. J.

    2002-05-01

    The Chesapeake Lighthouse Aircraft Measurements for Satellites (CLAMS) took place from 10 July to 2 Aug 2001, over and around the Chesapeake Lighthouse, some 25 kilometers off the coast of Virginia Beach, Virginia, and the Wallops Flight Facility (WFF) near Chincoteague, Virginia. This experiment was designed mainly for validating instruments and algorithms aboard the Terra satellite platform, including the MODerate resolution Imaging Spectrometer (MODIS). Over ocean pixels, MODIS retrieved optical depths (AOD) at seven wavelengths and an estimate of the aerosol size distribution. Temporally coincident measurements of aerosol properties were made with sunphotometers from sites near WFF, from the Chesapeake Lighthouse, and airborne in a variety of locations just above Atlantic ocean surface. This suite of sunphotometer measurements include: standard visible wavelength AOD and size from three Aerosol Robotic Network (AERONET) instruments, standard visible and new infrared wavelength AOD from six Microtops handheld instruments, infrared wavelength AOD from the Ames Airborne Tracking Sunphotometer (AATS-14), and unique hyperspectral AOD from a Analytical Spectral Devices (ASD) FieldSpec spectrometer. In this study, we compare AOD retrieved from MODIS with measurements from the surface, paying special attention to the new infrared wavelength validation data. A detailed evaluation of the CLAMS spectral optical depth combined with retrieved size distributions will be a first step toward improvement of the aerosol models used in the MODIS retrieval.

  7. A new approach for retrieving the UV-vis optical properties of ambient aerosols

    NASA Astrophysics Data System (ADS)

    Bluvshtein, Nir; Flores, J. Michel; Segev, Lior; Rudich, Yinon

    2016-08-01

    Atmospheric aerosols play an important part in the Earth's energy budget by scattering and absorbing incoming solar and outgoing terrestrial radiation. To quantify the effective radiative forcing due to aerosol-radiation interactions, researchers must obtain a detailed understanding of the spectrally dependent intensive and extensive optical properties of different aerosol types. Our new approach retrieves the optical coefficients and the single-scattering albedo of the total aerosol population over 300 to 650 nm wavelength, using extinction measurements from a broadband cavity-enhanced spectrometer at 315 to 345 nm and 390 to 420 nm, extinction and absorption measurements at 404 nm from a photoacoustic cell coupled to a cavity ring-down spectrometer, and scattering measurements from a three-wavelength integrating nephelometer. By combining these measurements with aerosol size distribution data, we retrieved the time- and wavelength-dependent effective complex refractive index of the aerosols. Retrieval simulations and laboratory measurements of brown carbon proxies showed low absolute errors and good agreement with expected and reported values. Finally, we implemented this new broadband method to achieve continuous spectral- and time-dependent monitoring of ambient aerosol population, including, for the first time, extinction measurements using cavity-enhanced spectrometry in the 315 to 345 nm UV range, in which significant light absorption may occur.

  8. A Minimal Fragmentation Approach to Real Time Aerosol Mass Spectrometry: A New Tool for Detailed Laboratory Studies of Organic Aerosol Aging

    NASA Astrophysics Data System (ADS)

    Campuzano-Jost, P.; Hanna, S.; Simpson, E.; Robb, D.; Blades, M. W.; Hepburn, J. W.; Bertram, A. K.

    2005-12-01

    The study of the atmospheric distribution and chemical processing of both biogenic and anthropogenic organics is one of the oldest and still most enduring challenges in atmospheric chemistry. The large number and structural complexity of many of the compounds as well as the high reactivity of many intermediates makes it hard to design analytical tools that are at the same time sensitive enough as well as being reasonably broad in scope. Despite big advances in techniques to characterize the gaseous phase component, there is still a dearth of instruments capable of doing the same for the organic aerosol component. This is due in part to the type of the compounds present in the aerosol phase, which in general lend themselves less to classical analytical methods such as GC/MS, as well as the inherent problems of any aerosol analysis, namely to transfer the aerosol to a suitable phase for analysis without altering it and while keeping track, at the same time, of the physical properties of the aerosol. Although impaction methods coupled to conventional analysis techniques have some specific advantages, the most widely used approach is the aerosol mass spectrometer. Unlike their predecessors, current aerosol mass spectrometer designs do a reasonably good job of delivering a representative sample of the aerosol phase to the detector while keeping track of the physical properties of the aerosol. However, the ionization step (either multitphoton absorption or electron impact in most cases) still leads to massive fragmentation of all but the most stable organics, making it very difficult to characterize individual compounds beyond establishing their functional groups(Allan et al. 2003; Su et al. 2004). Single photon near threshold ionization has been proposed and used recently (Oktem et al. 2004; Nash et al. 2005), but the challenges of producing coherent VUV radiation has led to a high detection threshold and a still significant amount of fragmentation, since these studies

  9. Portable smartphone optical fibre spectrometer

    NASA Astrophysics Data System (ADS)

    Hossain, Md. Arafat; Canning, John; Cook, Kevin; Jamalipour, Abbas

    2015-09-01

    A low cost, optical fibre based spectrometer has been developed on a smartphone platform for field-portable spectral analysis. Light of visible wavelength is collected using a multimode optical fibre and diffracted by a low cost nanoimprinted diffraction grating. A measurement range over 300 nm span (λ = 400 to 700 nm) is obtained using the smartphone CMOS chip. The spectral resolution is Δλ ~ 0.42 nm/screen pixel. A customized Android application processed the spectra on the same platform and shares with other devices. The results compare well with commercially available spectrometer.

  10. Towed seabed gamma ray spectrometer

    SciTech Connect

    Jones, D.G. )

    1994-08-01

    For more than 50 years, the measurement of radioactivity has been used for onshore geological surveys and in laboratories. The British Geological Survey (BGS) has extended the use of this type of equipment to the marine environment with the development of seabed gamma ray spectrometer systems. The present seabed gamma ray spectrometer, known as the Eel, has been successfully used for sediment and solid rock mapping, mineral exploration, and radioactive pollution studies. The range of applications for the system continues to expand. This paper examines the technological aspects of the Eel and some of the applications for which it has been used.

  11. Direct Aerosol Forcing Uncertainty

    DOE Data Explorer

    Mccomiskey, Allison

    2008-01-15

    Understanding sources of uncertainty in aerosol direct radiative forcing (DRF), the difference in a given radiative flux component with and without aerosol, is essential to quantifying changes in Earth's radiation budget. We examine the uncertainty in DRF due to measurement uncertainty in the quantities on which it depends: aerosol optical depth, single scattering albedo, asymmetry parameter, solar geometry, and surface albedo. Direct radiative forcing at the top of the atmosphere and at the surface as well as sensitivities, the changes in DRF in response to unit changes in individual aerosol or surface properties, are calculated at three locations representing distinct aerosol types and radiative environments. The uncertainty in DRF associated with a given property is computed as the product of the sensitivity and typical measurement uncertainty in the respective aerosol or surface property. Sensitivity and uncertainty values permit estimation of total uncertainty in calculated DRF and identification of properties that most limit accuracy in estimating forcing. Total uncertainties in modeled local diurnally averaged forcing range from 0.2 to 1.3 W m-2 (42 to 20%) depending on location (from tropical to polar sites), solar zenith angle, surface reflectance, aerosol type, and aerosol optical depth. The largest contributor to total uncertainty in DRF is usually single scattering albedo; however decreasing measurement uncertainties for any property would increase accuracy in DRF. Comparison of two radiative transfer models suggests the contribution of modeling error is small compared to the total uncertainty although comparable to uncertainty arising from some individual properties.

  12. Global Aerosol Observations

    Atmospheric Science Data Center

    2013-04-19

    ... atmosphere, directly influencing global climate and human health. Ground-based networks that accurately measure column aerosol amount and ... being used to improve Air Quality Models and for regional health studies. To assess the human-health impact of chronic aerosol exposure, ...

  13. Portable Aerosol Contaminant Extractor

    DOEpatents

    Carlson, Duane C.; DeGange, John J.; Cable-Dunlap, Paula

    2005-11-15

    A compact, portable, aerosol contaminant extractor having ionization and collection sections through which ambient air may be drawn at a nominal rate so that aerosol particles ionized in the ionization section may be collected on charged plate in the collection section, the charged plate being readily removed for analyses of the particles collected thereon.

  14. Ganges valley aerosol experiment.

    SciTech Connect

    Kotamarthi, V.R.; Satheesh, S.K.

    2011-08-01

    In June 2011, the Ganges Valley Aerosol Experiment (GVAX) began in the Ganges Valley region of India. The objective of this field campaign is to obtain measurements of clouds, precipitation, and complex aerosols to study their impact on cloud formation and monsoon activity in the region.

  15. Particle size distribution of the stratospheric aerosol from SCIAMACHY limb measurements

    NASA Astrophysics Data System (ADS)

    Rozanov, Alexei; Malinina, Elizaveta; Rozanov, Vladimir; Hommel, Rene; Burrows, John

    2016-04-01

    Stratospheric aerosols are of a great scientific interest because of their crucial role in the Earth's radiative budget as well as their contribution to chemical processes resulting in ozone depletion. While the permanent aerosol background in the stratosphere is determined by the tropical injection of SO2, COS and sulphate particles from the troposphere, major perturbations of the stratospheric aerosol layer result form an uplift of SO2 after strong volcanic eruptions. Satellite measurements in the visible spectral range represent one of the most important sources of information about the vertical distribution of the stratospheric aerosol on the global scale. This study employs measurements of the scattered solar light performed in the limb viewing geometry from the space borne spectrometer SCIAMACHY, which operated onboard the ENVISAT satellite, from August 2002 to April 2012. A retrieval approach to obtain parameters of the stratospheric aerosol particle size distribution will be reported along with the sensitivity studies and first results.

  16. Secondary Organic Aerosol from biogenic VOCs over West Africa during AMMA

    NASA Astrophysics Data System (ADS)

    Capes, G.; Murphy, J. G.; Reeves, C. E.; McQuaid, J. B.; Hamilton, J. F.; Hopkins, J. R.; Crosier, J.; Williams, P. I.; Coe, H.

    2009-01-01

    This paper presents measurements of organic aerosols above subtropical West Africa during the wet season using data from the UK Facility for Airborne Atmospheric Measurements (FAAM) aircraft. Measurements of biogenic volatile organic compounds (BVOC) at low altitudes over these subtropical forests were made during the African Monsoon Multidisciplinary Analysis (AMMA) field experiment during July and August 2006 mainly above Benin, Nigeria and Niger. Data from an Aerodyne Quadrupole Aerosol Mass Spectrometer show a median organic aerosol loading of 1.08 μg m-3 over tropical West Africa, which represents the first regionally averaged assessment of organic aerosol mass (OM) in this region during the wet season. This is in good agreement with predictions based on aerosol yields from isoprene and monoterpenes during chamber studies and model predictions based on partitioning schemes, contrasting markedly with the large under representations of OM in similar models when compared with data from mid latitudes.

  17. Vacuum FTIR observation on hygroscopic properties and phase transition of malonic acid aerosols

    NASA Astrophysics Data System (ADS)

    Shao, Xu; Zhang, Yun; Pang, Shu-Feng; Zhang, Yun-Hong

    2017-02-01

    A novel approach based on a combination of a pulse relative humidity (RH) controlling system and a rapid scan vacuum FTIR spectrometer was utilized to investigate the hygroscopic property and phase transition of malonic acid (MA) aerosols. By using this approach, both water vapor amount around the aerosols and water content within aerosols with sub-second time resolution were obtained. Based on the features of FTIR absorbing bands, it can be known that the evolution of hydrogen-bonding structures of malonic acid aerosols took place from (H2O)n-MA to MA-MA accompanying with phase transition in the dehumidifying process. And in present paper, the stepwise efflorescence of MA aerosols and nucleation rates at different RHs are first reported. Our observation has shown that the efflorescence of MA started at ∼17% RH and the nucleation rates increased with decreasing RH.

  18. A high-throughput neutron spectrometer

    NASA Astrophysics Data System (ADS)

    Stampfl, Anton; Noakes, Terry; Bartsch, Friedl; Bertinshaw, Joel; Veliscek-Carolan, Jessica; Nateghi, Ebrahim; Raeside, Tyler; Yethiraj, Mohana; Danilkin, Sergey; Kearley, Gordon

    2010-03-01

    A cross-disciplinary high-throughput neutron spectrometer is currently under construction at OPAL, ANSTO's open pool light-water research reactor. The spectrometer is based on the design of a Be-filter spectrometer (FANS) that is operating at the National Institute of Standards research reactor in the USA. The ANSTO filter-spectrometer will be switched in and out with another neutron spectrometer, the triple-axis spectrometer, Taipan. Thus two distinct types of neutron spectrometers will be accessible: one specialised to perform phonon dispersion analysis and the other, the filter-spectrometer, designed specifically to measure vibrational density of states. A summary of the design will be given along with a detailed ray-tracing analysis. Some preliminary results will be presented from the spectrometer.

  19. Organic Mass Fragments and Organic Functional Groups in Aged Biomass Burning and Fossil Fuel Combustion Aerosol

    NASA Astrophysics Data System (ADS)

    Day, D. A.; Hawkins, L. N.; Russell, L. M.

    2009-12-01

    Organic functional group concentrations in submicron aerosol particles collected from 27 June to 17 September at the Scripps Pier in La Jolla, California as part of AeroSCOPE 2008 were quantified using Fourier Transform Infrared (FTIR) spectroscopy. Organic and inorganic non-refractory components in the same air masses were quantified using a Quadrupole Aerosol Mass Spectrometer (Q-AMS). Previous measurements at the Scripps pier indicate that a large fraction of submicron particle mass originates in Los Angeles and the port of Long Beach. Additional particle sources to the region include local urban emissions and periodic biomass burning during large wildfires. Three distinct types of organic aerosol components were identified from organic composition and elemental tracers, including biomass burning, fossil fuel combustion, and polluted marine components. Fossil fuel combustion organic aerosol was dominated by unsaturated alkane and was correlated with sulfur, vanadium, and nickel supporting ship and large trucks in and around the Los Angeles/Long Beach region as the dominant source. Biomass burning organic aerosol comprised a smaller unsaturated alkane fraction and larger fractions of non-acid carbonyl, amine, and carboxylic acid and was correlated with potassium and bromine. Polluted marine organic aerosol was dominated by organic hydroxyl and unsaturated alkane and was not correlated with any elemental tracers. Mass spectra of the organic aerosol support the aerosol sources determined by organic functional groups and elemental tracers and contain fragments commonly attributed to oxygenated organic aerosol (OOA), hydrocarbon-like organic aerosol (HOA), and biomass burning organic aerosol (BBOA). Comparisons of the PMF-derived Q-AMS source spectra with FTIR source spectra and functional group composition provide additional information on the relationship between commonly reported organic aerosol factors and organic functional groups in specific organic aerosol

  20. CRISPR/Cas9-mediated gene editing in human zygotes using Cas9 protein.

    PubMed

    Tang, Lichun; Zeng, Yanting; Du, Hongzi; Gong, Mengmeng; Peng, Jin; Zhang, Buxi; Lei, Ming; Zhao, Fang; Wang, Weihua; Li, Xiaowei; Liu, Jianqiao

    2017-03-01

    Previous works using human tripronuclear zygotes suggested that the clustered regularly interspaced short palindromic repeat (CRISPR)/Cas9 system could be a tool in correcting disease-causing mutations. However, whether this system was applicable in normal human (dual pronuclear, 2PN) zygotes was unclear. Here we demonstrate that CRISPR/Cas9 is also effective as a gene-editing tool in human 2PN zygotes. By injection of Cas9 protein complexed with the appropriate sgRNAs and homology donors into one-cell human embryos, we demonstrated efficient homologous recombination-mediated correction of point mutations in HBB and G6PD. However, our results also reveal limitations of this correction procedure and highlight the need for further research.

  1. Radiative Effects of Aerosols

    NASA Technical Reports Server (NTRS)

    Valero, Francisco P. J.

    1996-01-01

    During the Atlantic Stratocumulus Transition Experiment (ASTEX) in June 1992, two descents in cloud-free regions allowed comparison of the change in aerosol optical depth as determined by an onboard total-direct-diffuse radiometer (TDDR) to the change calculated from measured size-resolved aerosol microphysics and chemistry. Both profiles included a pollution haze from Europe but the second also included the effect of a Saharan dust layer above the haze. The separate contributions of supermicrometer (coarse) and submicrometer (fine) aerosol were determined and thermal analysis of the pollution haze indicated that the fine aerosol was composed primarily of a sulfate/water mixture with a refractory soot-like core. The soot core increased the calculated extinction by about 10% in the most polluted drier layer relative to a pure sulfate aerosol but had significantly less effect at higher humidities. A 3 km descent through a boundary layer air mass dominated by pollutant aerosol with relative humidities (RH) 10-77% yielded a close agreement between the measured and calculated aerosol optical depths (550 nm) of 0.160 (+/- 0.07) and 0. 157 (+/- 0.034) respectively. During descent the aerosol mass scattering coefficient per unit sulfate mass varied from about 5 to 16 m(exp 2)/g and primarily dependent upon ambient RH. However, the total scattering coefficient per total fine mass was far less variable at about 4+/- 0.7 m(exp 2)/g. A subsequent descent through a Saharan dust layer located above the pollution aerosol layer revealed that both layers contributed similarly to aerosol optical depth. The scattering per unit mass of the coarse aged dust was estimated at 1.1 +/- 0.2 m(exp 2)/g. The large difference (50%) in measured and calculated optical depth for the dust layer exceeded measurements.

  2. Aerosol Size Distributions Measured in the Upper Troposphere and Lower Stratosphere: Formation, Coagulation, Transport and Sedimentation of the Background Non-Volcanic Aerosols

    NASA Astrophysics Data System (ADS)

    Lee, S.; Wilson, J. C.; Reeves, J. M.; Brock, C. A.; Jonsson, H. H.; Lowenstein, M.; Mahoney, M. J.; Herman, R. L.; Anderson, J. G.; Xueref, I.; Gerbig, C.; Andrews, A. E.; Hinsta, E.

    2002-12-01

    This study presents the particle size distribution of non-volcanic aerosols in the lower stratosphere and upper troposphere measured from 1995 to 2000 during five different high-altitude aircraft missions (STRAT, POLARIS, WAM, ACCENT, and SOLVE). The Focused Cavity Aerosol Spectrometer (FCAS), Condensation Nucleus Counter (CNC), and Nucleation-Mode Aerosol Sizing Spectrometer (N-MASS) were used to characterize the particle sizes in the diameter range from 4 to 2000 nm. Measurements were made at latitudes from 3.4S to 90N and the pressure altitudes form 7 to 21 km. These particle size distributions were analyzed using the potential temperature, tropopause height, and the mixing ratio of gas phase tracers such as N2O, CO2, NOy, O3 and water vapor. Particle formation, growth and sedimentation were studied to examine how the aerosol dynamics and atmospheric transport (Holton et al., 1995) determine the steady state aerosol size distribution in the lower stratosphere. This comprehensive data set will help us to better understand the origins and fate of the stratospheric background aerosols. Reference: Holton, J. R., et al., Stratosphere-troposphere exchange, Rev. Geophys., 33, 403-439, 1995.

  3. Guide RNA functional modules direct Cas9 activity and orthogonality.

    PubMed

    Briner, Alexandra E; Donohoue, Paul D; Gomaa, Ahmed A; Selle, Kurt; Slorach, Euan M; Nye, Christopher H; Haurwitz, Rachel E; Beisel, Chase L; May, Andrew P; Barrangou, Rodolphe

    2014-10-23

    The RNA-guided Cas9 endonuclease specifically targets and cleaves DNA in a sequence-dependent manner and has been widely used for programmable genome editing. Cas9 activity is dependent on interactions with guide RNAs, and evolutionarily divergent Cas9 nucleases have been shown to work orthogonally. However, the molecular basis of selective Cas9:guide-RNA interactions is poorly understood. Here, we identify and characterize six conserved modules within native crRNA:tracrRNA duplexes and single guide RNAs (sgRNAs) that direct Cas9 endonuclease activity. We show the bulge and nexus are necessary for DNA cleavage and demonstrate that the nexus and hairpins are instrumental in defining orthogonality between systems. In contrast, the crRNA:tracrRNA complementary region can be modified or partially removed. Collectively, our results establish guide RNA features that drive DNA targeting by Cas9 and open new design and engineering avenues for CRISPR technologies.

  4. Advances in therapeutic CRISPR/Cas9 genome editing.

    PubMed

    Savić, Nataša; Schwank, Gerald

    2016-02-01

    Targeted nucleases are widely used as tools for genome editing. Two years ago the clustered regularly interspaced short palindromic repeat (CRISPR)-associated Cas9 nuclease was used for the first time, and since then has largely revolutionized the field. The tremendous success of the CRISPR/Cas9 genome editing tool is powered by the ease design principle of the guide RNA that targets Cas9 to the desired DNA locus, and by the high specificity and efficiency of CRISPR/Cas9-generated DNA breaks. Several studies recently used CRISPR/Cas9 to successfully modulate disease-causing alleles in vivo in animal models and ex vivo in somatic and induced pluripotent stem cells, raising hope for therapeutic genome editing in the clinics. In this review, we will summarize and discuss such preclinical CRISPR/Cas9 gene therapy reports.

  5. Harnessing CRISPR-Cas9 immunity for genetic engineering.

    PubMed

    Charpentier, Emmanuelle; Marraffini, Luciano A

    2014-06-01

    CRISPR-Cas encodes an adaptive immune system that defends prokaryotes against infectious viruses and plasmids. Immunity is mediated by Cas nucleases, which use small RNA guides (the crRNAs) to specify a cleavage site within the genome of invading nucleic acids. In type II CRISPR-Cas systems, the DNA-cleaving activity is performed by a single enzyme Cas9 guided by an RNA duplex. Using synthetic single RNA guides, Cas9 can be reprogrammed to create specific double-stranded DNA breaks in the genomes of a variety of organisms, ranging from human cells to bacteria, and thus constitutes a powerful tool for genetic engineering. Here we describe recent advancements in our understanding of type II CRISPR-Cas immunity and how these studies led to revolutionary genome editing applications.

  6. Broadband measurements of aerosol extinction in the ultraviolet spectral region

    NASA Astrophysics Data System (ADS)

    Washenfelder, R. A.; Flores, J. M.; Brock, C. A.; Brown, S. S.; Rudich, Y.

    2013-01-01

    Aerosols influence the Earth's radiative budget by scattering and absorbing incoming solar radiation. The optical properties of aerosols vary as a function of wavelength, but few measurements have reported the wavelength dependence of aerosol extinction cross-sections and complex refractive indices. We describe a new laboratory instrument to measure aerosol optical extinction as a function of wavelength, using cavity enhanced spectroscopy with a broadband light source. The instrument consists of two broadband channels which span the 360-390 and 385-420 nm spectral regions using two light emitting diodes (LED) and a grating spectrometer with charge-coupled device (CCD) detector. We determined aerosol extinction cross-sections and directly observed Mie scattering resonances for aerosols that are purely scattering (polystyrene latex spheres and ammonium sulfate), slightly absorbing (Suwannee River fulvic acid), and strongly absorbing (nigrosin dye). We describe an approach for retrieving refractive indices as a function of wavelength from the measured extinction cross-sections over the 360-420 nm wavelength region. The retrieved refractive indices for PSL and ammonium sulfate agree within uncertainty with literature values for this spectral region. The refractive index determined for nigrosin is 1.78 (±0.03) + 0.19 (±0.08) i at 360 nm and 1.53 (±0.03) + 0.21 (±0.05) i at 420 nm. The refractive index determined for Suwannee River fulvic acid is 1.71 (±0.02) + 0.07 (±0.06) i at 360 nm and 1.66 (±0.02) + 0.06 (±0.04) i at 420 nm. These laboratory results support the potential for a field instrument capable of determining ambient aerosol optical extinction, average aerosol extinction cross-section, and complex refractive index as a function of wavelength.

  7. Broadband measurements of aerosol extinction in the ultraviolet spectral region

    NASA Astrophysics Data System (ADS)

    Washenfelder, R. A.; Flores, J. M.; Brock, C. A.; Brown, S. S.; Rudich, Y.

    2013-04-01

    Aerosols influence the Earth's radiative budget by scattering and absorbing incoming solar radiation. The optical properties of aerosols vary as a function of wavelength, but few measurements have reported the wavelength dependence of aerosol extinction cross sections and complex refractive indices. We describe a new laboratory instrument to measure aerosol optical extinction as a function of wavelength, using cavity enhanced spectroscopy with a broadband light source. The instrument consists of two broadband channels which span the 360-390 and 385-420 nm spectral regions using two light emitting diodes (LED) and a grating spectrometer with charge-coupled device (CCD) detector. We determined aerosol extinction cross sections and directly observed Mie scattering resonances for aerosols that are purely scattering (polystyrene latex spheres and ammonium sulfate), slightly absorbing (Suwannee River fulvic acid), and strongly absorbing (nigrosin dye). We describe an approach for retrieving refractive indices as a function of wavelength from the measured extinction cross sections over the 360-420 nm wavelength region. The retrieved refractive indices for PSL and ammonium sulfate agree within uncertainty with the literature values for this spectral region. The refractive index determined for nigrosin is 1.78 (± 0.03) + 0.19 (± 0.08)i at 360 nm and 1.63 (± 0.03) + 0.21 (± 0.05)i at 420 nm. The refractive index determined for Suwannee River fulvic acid is 1.71 (± 0.02) + 0.07 (± 0.06)i at 360 nm and 1.66 (± 0.02) + 0.06 (± 0.04)i at 420 nm. These laboratory results support the potential for a field instrument capable of determining ambient aerosol optical extinction, average aerosol extinction cross section, and complex refractive index as a function of wavelength.

  8. Mass spectrometry investigation of Titan aerosols analogs formed with traces of aromatic compounds

    NASA Astrophysics Data System (ADS)

    Gautier, Thomas; Trainer, Melissa; Sebree, Joshua; Li, Xiang; Pinnick, Veronica; Getty, Stephanie; Brinckerhoff, Will

    2016-06-01

    The detection of benzene at ppm levels in Titan's atmosphere [1] by Cassini's Ion and Neutral Mass Spectrometer (INMS) supports the idea that aromatic and heteroaromatic reaction pathways may play an important role in Titan's aerosols formation. In laboratory studies it has been shown that these aromatic molecules are easily dissociated by ultraviolet radiation and can therefore contribute significantly to aerosol formation [2] and be used to dope the production of aerosol analogs [3]. In this work we investigate the effect on the aerosol composition and growth pattern of the chemical nature of the aromatic reactant used to produce aerosol. Analysis are performed using Laser Desorption-Time of Flight mass spectrometry (LD-TOF) and Fourier Transform Infrared Spectroscopy (FTIR) Infrared analysis of our samples shows that inclusion of aromatic compounds as trace precursors allows to better fit laboratory data to Titan aerosol spectra observed by Cassini [3,4]. The improvement is especially visible on the far infrared (˜200 cm-1) bands observed by CIRS [5]. LDMS results show that the aerosol growth patterns depend both on the number of rings and on the nitrogen content of the trace precursor used. We also perform MS/MS analysis on some prominent peaks of aerosol mass spectra. This MS/MS approach allows us to identify some of the key compounds in the aerosol growth processes.

  9. Mid-infrared extinction by sulfate aerosols from the Mt. Pinatubo eruption

    NASA Technical Reports Server (NTRS)

    Rinsland, C. P.; Yue, G. K.; Gunson, M. R.; Zander, R.; Abrams, M. C.

    1994-01-01

    Quantitative measurements of the wavelength dependence of aerosol extinction in the 750-3400/cm spectral region have been derived from 0.01/cm resolution stratospheric solar occultation spectra recorded by the ATMOS (Atmospheric Trace Molecule Spectroscopy) Fourier transform spectrometer about 9 1/2 months after the Mt Pinatubo volcanic eruption. Strong, broad aerosol features have been identified near 900, 1060, 1190, 1720, and 2900/cm below a tangent height of approximately 30 km. Aerosol extinction measurements derived from approximately 0.05/cm wide microwindows nearly free of telluric line absorption in the ATMOS spectra are compared with transmission calculations derived from aerosol size distribution profiles retrieved from correlative SAGE (Stratospheric Aerosol and Gas Experiment) II visible and near i.r. extinction measurements, seasonal and zonally averaged H2SO4 aerosol weight percentage profiles, and published sulfuric acid optical constants derived from room temperature laboratory measurements. The calculated shapes and positions of the aerosol features are generally consistent with the observations, thereby confirming that the aerosols are predominantly concentrated H2SO4-H2O droplets, but there are significant differences between the measured and calculated wavelength dependences of the aerosol extinction. We attribute these differences as primarily the result of errors in the calculated low temperature H2SO4-H2O optical constants. Errors in both the published room temperature optical constants and the limitations of the Lorentz-Lorenz relation are likely to be important.

  10. Ozone, Iodine, and MSA - Case studies in Antarctic aerosol composition from the 2ODIAC Campaign

    NASA Astrophysics Data System (ADS)

    Giordano, M.; Kalnajs, L.; Deshler, T.; Davis, S. M.; Johnson, A.; Slater, A. G.; Goetz, J. D.; Mukherjee, A. D.; DeCarlo, P. F.

    2015-12-01

    Aerosol generation and transport over the Polar Regions, and especially Antarctica, remains a source of uncertainty for geophysical scientists. A characterization of aerosol sources, production, and lifecycle processes in the Polar Regions is required to better understand the polar atmosphere. In an attempt to better characterize Antarctic aerosol and trace gas interactions, the Two-Season, Ozone Depletion and Interaction with Aerosols Campaign (2ODIAC) was launched over the Austral Spring/Summer of 2014 and Austral Winter of 2015. One highlight of the campaign is the first ever deployment of a high-resolution aerosol mass spectrometer to Antarctica. In conjunction with trace gas, meteorology, and aerosol sizing measurements, this presentation will focus on case studies from the campaign relevant to the atmospheric science community. Questions about the role of iodine, MSA, and ozone depletion events in regards to aerosol composition will be examined. Specific attention will be paid to aerosol compositional changes before, during, and after particle bursts especially where changes in aerosol sulfate oxidation occurred (SO2 -> SO4)

  11. Characterization and Evolution of Salmonella CRISPR-Cas Systems

    DTIC Science & Technology

    2014-01-01

    SECURITY CLASSIFICATION OF: Prokaryotic CRISPR -Cas (clustered regularly interspaced short palindromic repeats and CRISPR -associated genes) systems provide...adaptive immunity from invasive genetic elements and encompass three essential features: (i) cas genes, (ii) a CRISPR array composed of spacers and...direct repeats and (iii) an AT-rich leader sequence upstream of the array. We performed in- depth sequence analysis of the CRISPR -Cas systems in .600

  12. Alpha proton x ray spectrometer

    NASA Technical Reports Server (NTRS)

    Rieder, Rudi; Waeke, H.; Economou, T.

    1994-01-01

    Mars Pathfinder will carry an alpha-proton x ray spectrometer (APX) for the determination of the elemental chemical composition of Martian rocks and soils. The instrument will measure the concentration of all major and some minor elements, including C, N, and O at levels above typically 1 percent.

  13. Convex Diffraction Grating Imaging Spectrometer

    NASA Technical Reports Server (NTRS)

    Chrisp, Michael P. (Inventor)

    1999-01-01

    A 1:1 Offner mirror system for imaging off-axis objects is modified by replacing a concave spherical primary mirror that is concentric with a convex secondary mirror with two concave spherical mirrors M1 and M2 of the same or different radii positioned with their respective distances d1 and d2 from a concentric convex spherical diffraction grating having its grooves parallel to the entrance slit of the spectrometer which replaces the convex secondary mirror. By adjusting their distances d1 and d2 and their respective angles of reflection alpha and beta, defined as the respective angles between their incident and reflected rays, all aberrations are corrected without the need to increase the spectrometer size for a given entrance slit size to reduce astigmatism, thus allowing the imaging spectrometer volume to be less for a given application than would be possible with conventional imaging spectrometers and still give excellent spatial and spectral imaging of the slit image spectra over the focal plane.

  14. IPNS-I chopper spectrometers

    SciTech Connect

    Price, D.L.; Carpenter, J.M.; Pelizzari, C.A.; Sinha, S.K.; Bresof, I.; Ostrowski, G.E.

    1982-01-01

    We briefly describe the layout and operation of the two chopper experiments at IPNS-I. The recent measurement on solid /sup 4/He by Hilleke et al. provides examples of time-of-flight data from the Low Resolution Chopper Spectrometer.

  15. Time of flight mass spectrometer

    DOEpatents

    Ulbricht, Jr., William H.

    1984-01-01

    A time-of-flight mass spectrometer is described in which ions are desorbed from a sample by nuclear fission fragments, such that desorption occurs at the surface of the sample impinged upon by the fission fragments. This configuration allows for the sample to be of any thickness, and eliminates the need for complicated sample preparation.

  16. Imaging IR spectrometer, phase 2

    NASA Technical Reports Server (NTRS)

    Gradie, Jonathan; Lewis, Ralph; Lundeen, Thomas; Wang, Shu-I

    1990-01-01

    The development is examined of a prototype multi-channel infrared imaging spectrometer. The design, construction and preliminary performance is described. This instrument is intended for use with JPL Table Mountain telescope as well as the 88 inch UH telescope on Mauna Kea. The instrument is capable of sampling simultaneously the spectral region of 0.9 to 2.6 um at an average spectral resolution of 1 percent using a cooled (77 K) optical bench, a concave holographic grating and a special order sorting filter to allow the acquisition of the full spectral range on a 128 x 128 HgCdTe infrared detector array. The field of view of the spectrometer is 0.5 arcsec/pixel in mapping mode and designed to be 5 arcsec/pixel in spot mode. The innovative optical design has resulted in a small, transportable spectrometer, capable of remote operation. Commercial applications of this spectrometer design include remote sensing from both space and aircraft platforms as well as groundbased astronomical observations.

  17. MICE Spectrometer Magnet System Progress

    SciTech Connect

    Green, Michael A.; Virostek, Steve P.

    2007-08-27

    The first magnets for the muon ionization cooling experimentwill be the tracker solenoids that form the ends of the MICE coolingchannel. The primary purpose of the tracker solenoids is to provide auniform 4 T field (to better than +-0.3 percent over a volume that is 1meter long and 0.3 meters in diameter) spectrometer magnet field for thescintillating fiber detectors that are used to analyze the muons in thechannel before and after ionization cooling. A secondary purpose for thetracker magnet is the matching of the muon beam between the rest of theMICE cooling channel and the uniform field spectrometer magnet. Thetracker solenoid is powered by three 300 amp power supplies. Additionaltuning of the spectrometer is provided by a pair of 50 amp power suppliesacross the spectrometer magnet end coils. The tracker magnet will becooled using a pair of 4 K pulse tube coolers that each provide 1.5 W ofcooling at 4.2 K. Final design and construction of the tracker solenoidsbegan during the summer of 2006. This report describes the progress madeon the construction of the tracker solenoids.

  18. Mid infrared MEMS FTIR spectrometer

    NASA Astrophysics Data System (ADS)

    Erfan, Mazen; Sabry, Yasser M.; Mortada, Bassem; Sharaf, Khaled; Khalil, Diaa

    2016-03-01

    In this work we report, for the first time to the best of our knowledge, a bulk-micromachined wideband MEMS-based spectrometer covering both the NIR and the MIR ranges and working from 1200 nm to 4800 nm. The core engine of the spectrometer is a scanning Michelson interferometer micro-fabricated using deep reactive ion etching (DRIE) technology. The spectrum is obtained using the Fourier Transform techniques that allows covering a very wide spectral range limited by the detector responsivity. The moving mirror of the interferometer is driven by a relatively large stroke electrostatic comb-drive actuator. Zirconium fluoride (ZrF4) multimode optical fibers are used to connect light between the white light source and the interferometer input, as well as the interferometer output to a PbSe photoconductive detector. The recorded signal-to-noise ratio is 25 dB at the wavelength of 3350 nm. The spectrometer is successfully used in measuring the absorption spectra of methylene chloride, quartz glass and polystyrene film. The presented solution provides a low cost method for producing miniaturized spectrometers in the near-/mid-infrared.

  19. Airborne spectrometer senses several gases

    NASA Technical Reports Server (NTRS)

    Mc Dowall, J.; Moffat, A. J.

    1970-01-01

    Spectrometer's variable shutter permits observation of a wide range of plume widths. Adjustable grating, counter, and access window enable operator to reset grating's position during flight by resetting the counter to a predetermined number. Quartz correlation mask and spectral-aperture instrument-function filter are mounted in a replaceable precision frame.

  20. Aqueous aerosol SOA formation: impact on aerosol physical properties.

    PubMed

    Woo, Joseph L; Kim, Derek D; Schwier, Allison N; Li, Ruizhi; McNeill, V Faye

    2013-01-01

    Organic chemistry in aerosol water has recently been recognized as a potentially important source of secondary organic aerosol (SOA) material. This SOA material may be surface-active, therefore potentially affecting aerosol heterogeneous activity, ice nucleation, and CCN activity. Aqueous aerosol chemistry has also been shown to be a potential source of light-absorbing products ("brown carbon"). We present results on the formation of secondary organic aerosol material in aerosol water and the associated changes in aerosol physical properties from GAMMA (Gas-Aerosol Model for Mechanism Analysis), a photochemical box model with coupled gas and detailed aqueous aerosol chemistry. The detailed aerosol composition output from GAMMA was coupled with two recently developed modules for predicting a) aerosol surface tension and b) the UV-Vis absorption spectrum of the aerosol, based on our previous laboratory observations. The simulation results suggest that the formation of oligomers and organic acids in bulk aerosol water is unlikely to perturb aerosol surface tension significantly. Isoprene-derived organosulfates are formed in high concentrations in acidic aerosols under low-NO(x) conditions, but more experimental data are needed before the potential impact of these species on aerosol surface tension may be evaluated. Adsorption of surfactants from the gas phase may further suppress aerosol surface tension. Light absorption by aqueous aerosol SOA material is driven by dark glyoxal chemistry and is highest under high-NO(x) conditions, at high relative humidity, in the early morning hours. The wavelength dependence of the predicted absorption spectra is comparable to field observations and the predicted mass absorption efficiencies suggest that aqueous aerosol chemistry can be a significant source of aerosol brown carbon under urban conditions.

  1. Chemical composition and characteristics of ambient aerosols and rainwater residues during Indian summer monsoon: Insight from aerosol mass spectrometry

    NASA Astrophysics Data System (ADS)

    Chakraborty, Abhishek; Gupta, Tarun; Tripathi, Sachchida N.

    2016-07-01

    Real time composition of non-refractory submicron aerosol (NR-PM1) is measured via Aerosol mass spectrometer (AMS) for the first time during Indian summer monsoon at Kanpur, a polluted urban location located at the heart of Indo Gangetic Plain (IGP). Submicron aerosols are found to be dominated by organics followed by nitrate. Source apportionment of organic aerosols (OA) via positive matrix factorization (PMF) revealed several types of secondary/oxidized and primary organic aerosols. On average, OA are completely dominated by oxidized OA with a very little contribution from biomass burning OA. During rain events, PM1 concentration is decreased almost by 60%, but its composition remains nearly the same. Oxidized OA showed slightly more decrease than primary OAs, probably due to their higher hygroscopicity. The presence of organo nitrates (ON) is also detected in ambient aerosols. Apart from real-time sampling, collected fog and rainwater samples were also analyzed via AMS in offline mode and in the ICP-OES (Inductively coupled plasma - Optical emission spectrometry) for elements. The presence of sea salt, organo nitrates and sulfates has been observed. Rainwater residues are also dominated by organics but their O/C ratios are 15-20% lower than the observed values for ambient OA. Alkali metals such as Ca, Na, K are found to be most abundant in the rainwater followed by Zn. Rainwater residues are also found to be much less oxidized than the aerosols present inside the fog water, indicating presence of less oxidized organics. These findings indicate that rain can act as an effective scavenger of different types of pollutants even for submicron particle range. Rainwater residues also contain organo sulfates which indicate that some portion of the dissolved aerosols has undergone aqueous processing, possibly inside the cloud. Highly oxidized and possibly hygroscopic OA during monsoon period compared to other seasons (winter, post monsoon), indicates that they can act

  2. AEROSOL CONCENTRATIONS DURING THE 1999 FRESNO EXPOSURE STUDIES AS FUNCTIONS OF SIZE, SEASON, AND METEOROLOGY

    EPA Science Inventory

    The 1999 Fresno exposure studies took place in February (winter season) and April/May (spring season) for two periods of four weeks. During that time, nearly-continuous measurements of outdoor aerosol concentrations were made with a scanning mobility spectrometer (TSI SNIPS) an...

  3. Control of gene expression by CRISPR-Cas systems.

    PubMed

    Bikard, David; Marraffini, Luciano A

    2013-01-01

    Clustered regularly interspaced short palindromic repeats (CRISPR) loci and their associated cas (CRISPR-associated) genes provide adaptive immunity against viruses (phages) and other mobile genetic elements in bacteria and archaea. While most of the early work has largely been dominated by examples of CRISPR-Cas systems directing the cleavage of phage or plasmid DNA, recent studies have revealed a more complex landscape where CRISPR-Cas loci might be involved in gene regulation. In this review, we summarize the role of these loci in the regulation of gene expression as well as the recent development of synthetic gene regulation using engineered CRISPR-Cas systems.

  4. Ectopia cordis thoracique sporadique: description clinique d'un cas

    PubMed Central

    Lubala, Toni Kasole; Mutombo, Augustin Mulangu; Katamea, Tina; Lubala, Nina; Munkana, Arthur Ndundula; Kabuya, Maguy Sangaji; Monga, Joséphine Kalenga; Luboya, Oscar Numbi

    2012-01-01

    Nous décrivons un cas d'ectopia cordis, une malformation cardiaque congénitale extrêmement rare dans laquelle le coeur est partiellement ou complètement situé en dehors des limites de la cage thoracique. Dans le cas que nous décrivons, elle est thoracique et isolée. Ce cas a été diagnostiqué en salle de naissance au Katanga, au sud de la République Démocratique du Congo. Il s'agit du premier cas documenté chez un nouveau-né Congolais. PMID:23346276

  5. CRISPR-Cas9-guided Genome Engineering in C. elegans

    PubMed Central

    Kim, Hyun-Min; Colaiácovo, Monica P.

    2016-01-01

    The CRISPR (clustered regularly interspaced short palindromic repeats)-Cas (CRISPR-associated) system is successfully being used for efficient and targeted genome editing in various organisms including the nematode C. elegans. Recent studies developed various CRISPR-Cas9 approaches to enhance genome engineering via two major DNA double-strand break repair pathways: non-homologous end joining and homologous recombination. Here we describe a protocol for Cas9-mediated C. elegans genome editing together with single guide RNA (sgRNA) and repair template cloning and injection methods required for delivering Cas9, sgRNAs and repair template DNA into the C. elegans germline. PMID:27366893

  6. Calibrated Ancillary System (CAS) user's guide, volume 1

    NASA Technical Reports Server (NTRS)

    1986-01-01

    The Calibrated Ancillary System (CAS) provides real-time calibrated parameters from the orbiter downlink (ancillary data) to the Goddard Space Flight Center (GSFC). This user's guide contains the introduction to the equipment, operation, general procedures, and specific procedures of the CAS. Volume 1 includes a general overview of the CAS relationships with other equipment, physical design, and hardware and software subsystems. In addition, a description of the user levels and tasks, an introduction to CAS operation, and an outline of general operating procedures are included.

  7. Foreign DNA capture during CRISPR–Cas adaptive immunity

    PubMed Central

    Nuñez, James K.; Harrington, Lucas B.; Kranzusch, Philip J.; Engelman, Alan N.; Doudna, Jennifer A.

    2015-01-01

    Bacteria and archaea generate adaptive immunity against phages and plasmids by integrating foreign DNA of specific 30–40 base pair (bp) lengths into clustered regularly interspaced short palindromic repeats (CRISPR) loci as spacer segments1–6. The universally conserved Cas1–Cas2 integrase complex catalyzes spacer acquisition using a direct nucleophilic integration mechanism similar to retroviral integrases and transposases7–13. How the Cas1–Cas2 complex selects foreign DNA substrates for integration remains unknown. Here we present X-ray crystal structures of the Escherichia coli Cas1–Cas2 complex bound to cognate 33 nucleotide (nt) protospacer DNA substrates. The protein complex creates a curved binding surface spanning the length of the DNA and splays the ends of the protospacer to allow each terminal nucleophilic 3′–OH to enter a channel leading into the Cas1 active sites. Phosphodiester backbone interactions between the protospacer and the proteins explain the sequence-nonspecific substrate selection observed in vivo2–4. Our results uncover the structural basis for foreign DNA capture and the mechanism by which Cas1–Cas2 functions as a molecular ruler to dictate the sequence architecture of CRISPR loci. PMID:26503043

  8. Foreign DNA capture during CRISPR-Cas adaptive immunity.

    PubMed

    Nuñez, James K; Harrington, Lucas B; Kranzusch, Philip J; Engelman, Alan N; Doudna, Jennifer A

    2015-11-26

    Bacteria and archaea generate adaptive immunity against phages and plasmids by integrating foreign DNA of specific 30-40-base-pair lengths into clustered regularly interspaced short palindromic repeat (CRISPR) loci as spacer segments. The universally conserved Cas1-Cas2 integrase complex catalyses spacer acquisition using a direct nucleophilic integration mechanism similar to retroviral integrases and transposases. How the Cas1-Cas2 complex selects foreign DNA substrates for integration remains unknown. Here we present X-ray crystal structures of the Escherichia coli Cas1-Cas2 complex bound to cognate 33-nucleotide protospacer DNA substrates. The protein complex creates a curved binding surface spanning the length of the DNA and splays the ends of the protospacer to allow each terminal nucleophilic 3'-OH to enter a channel leading into the Cas1 active sites. Phosphodiester backbone interactions between the protospacer and the proteins explain the sequence-nonspecific substrate selection observed in vivo. Our results uncover the structural basis for foreign DNA capture and the mechanism by which Cas1-Cas2 functions as a molecular ruler to dictate the sequence architecture of CRISPR loci.

  9. Infrared spectroscopy of aerosols

    NASA Astrophysics Data System (ADS)

    Mentel, Th.; Sebald, H.

    2003-04-01

    In our large Aerosol Chamber at the FZ Jülich we apply HR FTIR absorption spectroscopy for the determination of trace gases. In the FTIR spectra we also observe broad absorptions of several 10 to a few 100 cm-1 widths that arise from species in the condensed aerosol phase: liquid H_2O, NO_3^-, SO_42-, HSO_4^-, or dicarboxylic acids. Moreover, the aerosol droplets caused extinctions over several 1000 cm-1 by IR scattering. This allows for in-situ observation of changes in the condensed aerosol phase e.g. on HNO_3 uptake, like the shift of the sulfate/bisulfate equilibrium or the growth by water condensation. The IR absorptions of the condensed aerosol phase provide useful extra information in process studies, if they can be quantified. Therefore the absorption cross section, respective, the absorption index which is the imaginary part of the complex refractive index is needed. We set up an aerosol flow tube in which IR spectroscopy on a 8 m light path and aerosol size distribution measurements in the range from 20 nm - 10 μm can be performed simultaneously. We measured sulfate aerosols at several relative humidities (dry, metastable, deliquescent). We will demonstrate an iterative procedure based on Mie calculations and Kramers Kronig transformation to retrieve the absorption index from the observed IR spectra and the corresponding size distribution (for dry ammonium sulfate). We will compare resulting absorption indices for aqueous sodium bisulfate aerosols at several relative humidties with thermodynamic model calculations for the Na^+/H^+/HSO_4^-/SO_42-/H_2O system.

  10. Quantification of the aerosol direct radiative effect from smoke over clouds using passive space-borne spectrometry

    NASA Astrophysics Data System (ADS)

    de Graaf, M.; Stammes, P.; Tilstra, L. G.

    2013-05-01

    The solar radiative absorption by smoke layers above clouds is quantified, using the unique broad spectral range of the space-borne spectrometer Scanning Imaging Absorption Spectrometer for Atmospheric Chartography (SCIAMACHY) from the ultraviolet (UV) to the shortwave infrared (SWIR). Aerosol radiative effects in the UV are separated from cloud radiative effects in the shortwave infrared (SWIR). In the UV, aerosol absorption from smoke is strong, creating a strong signal in the measured reflectance. In the SWIR, absorbing and scattering effects from smoke are negligible, allowing the retrieval of cloud parameters from the measured spectrum using existing retrieval techniques. The spectral signature of the cloud can be modelled using a radiative transfer model (RTM) and the cloud parameters retrieved in the SWIR. In this way, the aerosol effects can be determined from the measured aerosol-polluted cloud shortwave spectrum and the modelled aerosol-unpolluted cloud shortwave spectrum. This can be used to derive the aerosol direct radiative effect (DRE) over marine clouds, independent of aerosol parameter retrievals, significantly improving the current accuracy of aerosol DRE estimates. Only cloud parameters are needed to model the aerosolunpolluted cloud reflectance, while the effects of the aerosol absorption are in the aerosol-polluted cloud reflectance measurements. In this paper we present a case study of the above method using SCIAMACHY data over the South Atlantic Ocean west of Africa on 13 August 2006, when a huge plume of smoke was present over persistent cloud fields. The aerosol DRE over clouds was as high as 128 ± 8 Wm-2 for this case, while the aerosol DRE over clouds averaged through August 2006 was found to be 23 ± 8 Wm-2 with a mean variation over the region in this month of 22 Wm-2.

  11. Laser Magneto-Optic Rotation Spectrometer (LMORS)

    DTIC Science & Technology

    1998-01-01

    traditional method of measuring atomic concentrations uses atomic absorption spectroscopy (AAS), herein referred to as an AAS 15 spectrometer...MOR spectrometer of the present invention. Fig. 2 illustrates a calibration curve for a conventional 10 atomic absorption spectroscopy (AAS

  12. Determination of the broadband optical properties of biomass burning aerosol

    NASA Astrophysics Data System (ADS)

    Bluvshtein, Nir; Flores, J. Michel; Segev, Lior; Lin, Peng; Laskin, Alexander; Rudich, Yinon

    2016-04-01

    The direct and semi-direct effects of atmospheric aerosol on the Earth's energy balance are still the two of the largest uncertainties in our understanding of anthropogenic radiative forcing. In this study we developed a new approach for determining high sensitivity broadband UV-Vis spectrum (300-650 nm) of extinction, scattering and absorption coefficients, single scattering albedo and the complex refractive index for continuous, spectral and time dependent, monitoring of polydisperse aerosols population. This new approach was applied in a study of biomass burning aerosol. Extinction, scattering and absorption coefficients (αext, αsca, αabs, respectively) were continually monitored using photoacoustic spectrometer coupled to a cavity ring down spectrometer (PA-CRD-AS) at 404 nm, a dual-channel Broadband cavity-enhanced spectrometer (BBCES) at 315-345 nm and 390-420 nm and a three channel integrating nephelometer (IN) centered at 457, 525 and 637 nm. During the biomass burning event, the measured aerosol number concentration increased by more than an order of magnitude relative to other week nights and the mode of the aerosols size distribution increased from 40-50 nm to 110nm diameter. αext and αsca increased by a factor of about 5.5 and 4.5, respectively. The αabs increased by a factor over 20, indicating a significant change in the aerosol overall chemical composition. The imaginary part of the complex RI at 404nm increased from its background level at about 0.02 to a peak of about 0.08 and the SSA decreased from 0.9 to about 0.6. Significant change of the absorption spectral dependence indicates formation of visible-light absorbing compounds. The mass absorption cross section of the water soluble organic aerosol (MACWSOA) reached up to about 12% of the corresponding value for black carbon (BC) at 450 nm and up to 30% at 300 nm. These results demonstrate the importance of biomass burning in understanding global and regional radiative forcing.

  13. Tenth anniversary of CAS ONLINE service : What CAS services should be in the new era of chemical information

    NASA Astrophysics Data System (ADS)

    Kostakos, Charles N.

    Chemical Abstracts Service celebrated 10th anniversary of CAS online information service in 1990. A speech given on the occasion reviewed history of the CAS ONLINE, in relation to its most important benefits for scientists and engineers. The development of STN international, the network through which CAS ONLINE is accessible around the world, was also discussed in the speech. The CAS ONLINE now contains a wide variety of files relating to chemical field including CA file, Registry file. CA previews,. CASREACT, CIN. MARPAT, etc for supplying chemical information worldwide.

  14. Sample rotating turntable kit for infrared spectrometers

    DOEpatents

    Eckels, Joel Del; Klunder, Gregory L.

    2008-03-04

    An infrared spectrometer sample rotating turntable kit has a rotatable sample cup containing the sample. The infrared spectrometer has an infrared spectrometer probe for analyzing the sample and the rotatable sample cup is adapted to receive the infrared spectrometer probe. A reflectance standard is located in the rotatable sample cup. A sleeve is positioned proximate the sample cup and adapted to receive the probe. A rotator rotates the rotatable sample cup. A battery is connected to the rotator.

  15. Electron/proton spectrometer certification documentation analyses

    NASA Technical Reports Server (NTRS)

    Gleeson, P.

    1972-01-01

    A compilation of analyses generated during the development of the electron-proton spectrometer for the Skylab program is presented. The data documents the analyses required by the electron-proton spectrometer verification plan. The verification plan was generated to satisfy the ancillary hardware requirements of the Apollo Applications program. The certification of the spectrometer requires that various tests, inspections, and analyses be documented, approved, and accepted by reliability and quality control personnel of the spectrometer development program.

  16. Retrieval of Aerosol information from UV measurement by using optimal estimation method

    NASA Astrophysics Data System (ADS)

    KIM, M.; Kim, J.; Jeong, U.; Kim, W. V.; Kim, S. K.; Lee, S. D.; Moon, K. J.

    2014-12-01

    An algorithm to retrieve aerosol optical depth (AOD), single scattering albedo (SSA), and aerosol loading height is developed for GEMS (Geostationary Environment Monitoring Spectrometer) measurement. The GEMS is planned to be launched in geostationary orbit in 2018, and employs hyper-spectral imaging with 0.6 nm resolution to observe solar backscatter radiation in the UV and Visible range. In the UV range, the low surface contribution to the backscattered radiation and strong interaction between aerosol absorption and molecular scattering can be advantageous in retrieving aerosol information such as AOD and SSA [Torres et al., 2007; Torres et al., 2013; Ahn et al., 2014]. However, the large contribution of atmospheric scattering results in the increase of the sensitivity of the backward radiance to aerosol loading height. Thus, the assumption of aerosol loading height becomes important issue to obtain accurate result. Accordingly, this study focused on the simultaneous retrieval of aerosol loading height with AOD and SSA by utilizing the optimal estimation method. For the RTM simulation, the aerosol optical properties were analyzed from AERONET inversion data (level 2.0) at 46 AERONET sites over ASIA. Also, 2-channel inversion method is applied to estimate a priori value of the aerosol information to solve the Lavenberg Marquardt equation. The GEMS aerosol algorithm is tested with OMI level-1B dataset, a provisional data for GEMS measurement, and the result is compared with OMI standard aerosol product and AERONET values. The retrieved AOD and SSA show reasonable distribution compared with OMI products, and are well correlated with the value measured from AERONET. However, retrieval uncertainty in aerosol loading height is relatively larger than other results.

  17. Size-resolved aerosol composition and its link to hygroscopicity at a forested site in Colorado

    NASA Astrophysics Data System (ADS)

    Levin, E. J. T.; Prenni, A. J.; Palm, B. B.; Day, D. A.; Campuzano-Jost, P.; Winkler, P. M.; Kreidenweis, S. M.; DeMott, P. J.; Jimenez, J. L.; Smith, J. N.

    2014-03-01

    Aerosol hygroscopicity describes the ability of a particle to take up water and form a cloud droplet. Modeling studies have shown sensitivity of precipitation-producing cloud systems to the availability of aerosol particles capable of serving as cloud condensation nuclei (CCN), and hygroscopicity is a key parameter controlling the number of available CCN. Continental aerosol is typically assumed to have a representative hygroscopicity parameter, κ, of 0.3; however, in remote locations this value can be lower due to relatively large mass fractions of organic components. To further our understanding of aerosol properties in remote areas, we measured size-resolved aerosol chemical composition and hygroscopicity in a forested, mountainous site in Colorado during the six-week BEACHON-RoMBAS (Bio-hydro-atmosphere interactions of Energy, Aerosols, Carbon, H2O, Organics and Nitrogen-Rocky Mountain Biogenic Aerosol Study) campaign. This campaign followed a year-long measurement period at this site, and results from the intensive campaign shed light on the previously reported seasonal cycle in aerosol hygroscopicity. New particle formation events were observed routinely at this site and nucleation mode composition measurements indicated that the newly formed particles were predominantly organic. These events likely contribute to the dominance of organic species at smaller sizes, where aerosol organic mass fractions were between 70 and 90%. Corresponding aerosol hygroscopicity was observed to be in the range κ = 0.15-0.22, with hygroscopicity increasing with particle size. Aerosol chemical composition measured by an aerosol mass spectrometer and calculated from hygroscopicity measurements agreed very well during the intensive study, with an assumed value of κorg = 0.13 resulting in the best agreement.

  18. Characterization and source apportionment of organic aerosol using offline aerosol mass spectrometry

    NASA Astrophysics Data System (ADS)

    Daellenbach, K. R.; Bozzetti, C.; Křepelová, A.; Canonaco, F.; Wolf, R.; Zotter, P.; Fermo, P.; Crippa, M.; Slowik, J. G.; Sosedova, Y.; Zhang, Y.; Huang, R.-J.; Poulain, L.; Szidat, S.; Baltensperger, U.; Prévôt, A. S. H.; El Haddad, I.

    2015-08-01

    Field deployments of the Aerodyne Aerosol Mass Spectrometer (AMS) have significantly advanced real-time measurements and source apportionment of non-refractory particulate matter. However, the cost and complex maintenance requirements of the AMS make impractical its deployment at sufficient sites to determine regional characteristics. Furthermore, the negligible transmission efficiency of the AMS inlet for supermicron particles significantly limits the characterization of their chemical nature and contributing sources. In this study, we utilize the AMS to characterize the water-soluble organic fingerprint of ambient particles collected onto conventional quartz filters, which are routinely sampled at many air quality sites. The method was applied to 256 particulate matter (PM) filter samples (PM1, PM2.5, PM10) collected at 16 urban and rural sites during summer and winter. We show that the results obtained by the present technique compare well with those from co-located online measurements, e.g. AMS or Aerosol Chemical Speciation Monitor (ACSM). The bulk recoveries of organic aerosol (60-91 %) achieved using this technique, together with low detection limits (0.8 μg of organic aerosol on the analyzed filter fraction) allow its application to environmental samples. We will discuss the recovery variability of individual hydrocarbon, oxygen containing and other ions. The performance of such data in source apportionment is assessed in comparison to ACSM data. Recoveries of organic components related to different sources as traffic, wood burning and secondary organic aerosol are presented. This technique, while subjected to the limitations inherent to filter-based measurements (e.g. filter artifacts and limited time resolution) may be used to enhance the AMS capabilities in measuring size-fractionated, spatially-resolved long-term datasets.

  19. Characterization and source apportionment of organic aerosol using offline aerosol mass spectrometry

    NASA Astrophysics Data System (ADS)

    Daellenbach, K. R.; Bozzetti, C.; Křepelová, A.; Canonaco, F.; Wolf, R.; Zotter, P.; Fermo, P.; Crippa, M.; Slowik, J. G.; Sosedova, Y.; Zhang, Y.; Huang, R.-J.; Poulain, L.; Szidat, S.; Baltensperger, U.; El Haddad, I.; Prévôt, A. S. H.

    2016-01-01

    Field deployments of the Aerodyne Aerosol Mass Spectrometer (AMS) have significantly advanced real-time measurements and source apportionment of non-refractory particulate matter. However, the cost and complex maintenance requirements of the AMS make its deployment at sufficient sites to determine regional characteristics impractical. Furthermore, the negligible transmission efficiency of the AMS inlet for supermicron particles significantly limits the characterization of their chemical nature and contributing sources. In this study, we utilize the AMS to characterize the water-soluble organic fingerprint of ambient particles collected onto conventional quartz filters, which are routinely sampled at many air quality sites. The method was applied to 256 particulate matter (PM) filter samples (PM1, PM2.5, and PM10, i.e., PM with aerodynamic diameters smaller than 1, 2.5, and 10 µm, respectively), collected at 16 urban and rural sites during summer and winter. We show that the results obtained by the present technique compare well with those from co-located online measurements, e.g., AMS or Aerosol Chemical Speciation Monitor (ACSM). The bulk recoveries of organic aerosol (60-91 %) achieved using this technique, together with low detection limits (0.8 µg of organic aerosol on the analyzed filter fraction) allow its application to environmental samples. We will discuss the recovery variability of individual hydrocarbon ions, ions containing oxygen, and other ions. The performance of such data in source apportionment is assessed in comparison to ACSM data. Recoveries of organic components related to different sources as traffic, wood burning, and secondary organic aerosol are presented. This technique, while subjected to the limitations inherent to filter-based measurements (e.g., filter artifacts and limited time resolution) may be used to enhance the AMS capabilities in measuring size-fractionated, spatially resolved long-term data sets.

  20. Going to the Bottom of the Explosion that Formed Cas A

    NASA Technical Reports Server (NTRS)

    Oberlack, Uwe; Vink, Jacco

    2005-01-01

    The purpose of this INTEGRAL AO 1 proposal was to observe the gamma-ray lines at 1157 keV, as well as 68 keV and 78 keV of the (44)Ti decay chain from the youngest known galactic supernova remnant Cas A. The radioactive decay of (44)Ti in Cas A was first detected by COMPTEL in the 1157 keV line and later confirmed in the lower energy lines using BeppoSAX data. Despite the second confirming measurement, the flux value still has a considerable error, due to a low signal over background ratio and the poor definition of the continuum background in the range of 70 - 100 keV above the line energies. In addition to improving this flux measurement, INTEGRAL has the unique capability, in principle, to measure the line width of the emission. This type of measurement can further constrain supernova explosion models. Unfortunately, the INTEGRAL instrumental background, especially in the SPI spectrometer, turned out to be significantly higher than estimated at the time of proposal submission before launch. This, and to a smaller extent the reduced effective exposure time of about 1.5 Ms compared to requested 2.5 Ms, has precluded us from reaching the sensitivity necessary for this measurement. Studies of the background variability with the goal of improving background modeling are ongoing, and additional 2.5 Ms observing time has just been approved for the next observing cycle.

  1. Cas9 Variants Expand the Target Repertoire in Caenorhabditis elegans.

    PubMed

    Bell, Ryan T; Fu, Becky X H; Fire, Andrew Z

    2016-02-01

    The proliferation of CRISPR/Cas9-based methods in Caenorhabditis elegans has enabled efficient genome editing and precise genomic tethering of Cas9 fusion proteins. Experimental designs using CRISPR/Cas9 are currently limited by the need for a protospacer adjacent motif (PAM) in the target with the sequence NGG. Here we report the characterization of two modified Cas9 proteins in C. elegans that recognize NGA and NGCG PAMs. We found that each variant could stimulate homologous recombination with a donor template at multiple loci and that PAM specificity was comparable to that of wild-type Cas9. To directly compare effectiveness, we used CRISPR/Cas9 genome editing to generate a set of assay strains with a common single-guide RNA (sgRNA) target sequence, but that differ in the juxtaposed PAM (NGG, NGA, or NGCG). In this controlled setting, we determined that the NGA PAM Cas9 variant can be as effective as wild-type Cas9. We similarly edited a genomic target to study the influence of the base following the NGA PAM. Using four strains with four NGAN PAMs differing only at the fourth position and adjacent to the same sgRNA target, we observed that efficient homologous replacement was attainable with any base in the fourth position, with an NGAG PAM being the most effective. In addition to demonstrating the utility of two Cas9 mutants in C. elegans and providing reagents that permit CRISPR/Cas9 experiments with fewer restrictions on potential targets, we established a means to benchmark the efficiency of different Cas9::PAM combinations that avoids variations owing to differences in the sgRNA sequence.

  2. New CRISPR-Cas systems from uncultivated microbes.

    PubMed

    Burstein, David; Harrington, Lucas B; Strutt, Steven C; Probst, Alexander J; Anantharaman, Karthik; Thomas, Brian C; Doudna, Jennifer A; Banfield, Jillian F

    2017-02-09

    CRISPR-Cas systems provide microbes with adaptive immunity by employing short DNA sequences, termed spacers, that guide Cas proteins to cleave foreign DNA. Class 2 CRISPR-Cas systems are streamlined versions, in which a single RNA-bound Cas protein recognizes and cleaves target sequences. The programmable nature of these minimal systems has enabled researchers to repurpose them into a versatile technology that is broadly revolutionizing biological and clinical research. However, current CRISPR-Cas technologies are based solely on systems from isolated bacteria, leaving the vast majority of enzymes from organisms that have not been cultured untapped. Metagenomics, the sequencing of DNA extracted directly from natural microbial communities, provides access to the genetic material of a huge array of uncultivated organisms. Here, using genome-resolved metagenomics, we identify a number of CRISPR-Cas systems, including the first reported Cas9 in the archaeal domain of life, to our knowledge. This divergent Cas9 protein was found in little-studied nanoarchaea as part of an active CRISPR-Cas system. In bacteria, we discovered two previously unknown systems, CRISPR-CasX and CRISPR-CasY, which are among the most compact systems yet discovered. Notably, all required functional components were identified by metagenomics, enabling validation of robust in vivo RNA-guided DNA interference activity in Escherichia coli. Interrogation of environmental microbial communities combined with in vivo experiments allows us to access an unprecedented diversity of genomes, the content of which will expand the repertoire of microbe-based biotechnologies.

  3. New CRISPR–Cas systems from uncultivated microbes

    NASA Astrophysics Data System (ADS)

    Burstein, David; Harrington, Lucas B.; Strutt, Steven C.; Probst, Alexander J.; Anantharaman, Karthik; Thomas, Brian C.; Doudna, Jennifer A.; Banfield, Jillian F.

    2016-12-01

    CRISPR–Cas systems provide microbes with adaptive immunity by employing short DNA sequences, termed spacers, that guide Cas proteins to cleave foreign DNA. Class 2 CRISPR–Cas systems are streamlined versions, in which a single RNA-bound Cas protein recognizes and cleaves target sequences. The programmable nature of these minimal systems has enabled researchers to repurpose them into a versatile technology that is broadly revolutionizing biological and clinical research. However, current CRISPR–Cas technologies are based solely on systems from isolated bacteria, leaving the vast majority of enzymes from organisms that have not been cultured untapped. Metagenomics, the sequencing of DNA extracted directly from natural microbial communities, provides access to the genetic material of a huge array of uncultivated organisms. Here, using genome-resolved metagenomics, we identify a number of CRISPR–Cas systems, including the first reported Cas9 in the archaeal domain of life, to our knowledge. This divergent Cas9 protein was found in little-studied nanoarchaea as part of an active CRISPR–Cas system. In bacteria, we discovered two previously unknown systems, CRISPR–CasX and CRISPR–CasY, which are among the most compact systems yet discovered. Notably, all required functional components were identified by metagenomics, enabling validation of robust in vivo RNA-guided DNA interference activity in Escherichia coli. Interrogation of environmental microbial communities combined with in vivo experiments allows us to access an unprecedented diversity of genomes, the content of which will expand the repertoire of microbe-based biotechnologies.

  4. Recent Advances in Genome Editing Using CRISPR/Cas9

    PubMed Central

    Ding, Yuduan; Li, Hong; Chen, Ling-Ling; Xie, Kabin

    2016-01-01

    The CRISPR (clustered regularly interspaced short palindromic repeat)-Cas9 (CRISPR-associated nuclease 9) system is a versatile tool for genome engineering that uses a guide RNA (gRNA) to target Cas9 to a specific sequence. This simple RNA-guided genome-editing technology has become a revolutionary tool in biology and has many innovative applications in different fields. In this review, we briefly introduce the Cas9-mediated genome-editing method, summarize the recent advances in CRISPR/Cas9 technology, and discuss their implications for plant research. To date, targeted gene knockout using the Cas9/gRNA system has been established in many plant species, and the targeting efficiency and capacity of Cas9 has been improved by optimizing its expression and that of its gRNA. The CRISPR/Cas9 system can also be used for sequence-specific mutagenesis/integration and transcriptional control of target genes. We also discuss off-target effects and the constraint that the protospacer-adjacent motif (PAM) puts on CRISPR/Cas9 genome engineering. To address these problems, a number of bioinformatic tools are available to help design specific gRNAs, and new Cas9 variants and orthologs with high fidelity and alternative PAM specificities have been engineered. Owing to these recent efforts, the CRISPR/Cas9 system is becoming a revolutionary and flexible tool for genome engineering. Adoption of the CRISPR/Cas9 technology in plant research would enable the investigation of plant biology at an unprecedented depth and create innovative applications in precise crop breeding. PMID:27252719

  5. Advanced Mass Spectrometers for Hydrogen Isotope Analyses

    SciTech Connect

    Chastagner, P.

    2001-08-01

    This report is a summary of the results of a joint Savannah River Laboratory (SRL) - Savannah River Plant (SRP) ''Hydrogen Isotope Mass Spectrometer Evaluation Program''. The program was undertaken to evaluate two prototype hydrogen isotope mass spectrometers and obtain sufficient data to permit SRP personnel to specify the mass spectrometers to replace obsolete instruments.

  6. Electron spectrometer for gas-phase spectroscopy

    SciTech Connect

    Bozek, J.D.; Schlachter, A.S.

    1997-04-01

    An electron spectrometer for high-resolution spectroscopy of gaseous samples using synchrotron radiation has been designed and constructed. The spectrometer consists of a gas cell, cylindrical electrostatic lens, spherical-sector electron energy analyzer, position-sensitive detector and associated power supplies, electronics and vacuum pumps. Details of the spectrometer design are presented together with some representative spectra.

  7. Aerosol detection efficiency in inductively coupled plasma mass spectrometry

    SciTech Connect

    Hubbard, Joshua A.; Zigmond, Joseph A.

    2016-03-02

    We used an electrostatic size classification technique to segregate particles of known composition prior to being injected into an inductively coupled plasma mass spectrometer (ICP-MS). Moreover, we counted size-segregated particles with a condensation nuclei counter as well as sampled with an ICP-MS. By injecting particles of known size, composition, and aerosol concentration into the ICP-MS, efficiencies of the order of magnitude aerosol detection were calculated, and the particle size dependencies for volatile and refractory species were quantified. Similar to laser ablation ICP-MS, aerosol detection efficiency was defined as the rate at which atoms were detected in the ICP-MS normalized by the rate at which atoms were injected in the form of particles. This method adds valuable insight into the development of technologies like laser ablation ICP-MS where aerosol particles (of relatively unknown size and gas concentration) are generated during ablation and then transported into the plasma of an ICP-MS. In this study, we characterized aerosol detection efficiencies of volatile species gold and silver along with refractory species aluminum oxide, cerium oxide, and yttrium oxide. Aerosols were generated with electrical mobility diameters ranging from 100 to 1000 nm. In general, it was observed that refractory species had lower aerosol detection efficiencies than volatile species, and there were strong dependencies on particle size and plasma torch residence time. Volatile species showed a distinct transition point at which aerosol detection efficiency began decreasing with increasing particle size. This critical diameter indicated the largest particle size for which complete particle detection should be expected and agreed with theories published in other works. Aerosol detection efficiencies also displayed power law dependencies on particle size. Aerosol detection efficiencies ranged from 10-5 to 10-11. Free molecular heat and mass transfer

  8. Aerosol detection efficiency in inductively coupled plasma mass spectrometry

    NASA Astrophysics Data System (ADS)

    Hubbard, Joshua A.; Zigmond, Joseph A.

    2016-05-01

    An electrostatic size classification technique was used to segregate particles of known composition prior to being injected into an inductively coupled plasma mass spectrometer (ICP-MS). Size-segregated particles were counted with a condensation nuclei counter as well as sampled with an ICP-MS. By injecting particles of known size, composition, and aerosol concentration into the ICP-MS, efficiencies of the order of magnitude aerosol detection were calculated, and the particle size dependencies for volatile and refractory species were quantified. Similar to laser ablation ICP-MS, aerosol detection efficiency was defined as the rate at which atoms were detected in the ICP-MS normalized by the rate at which atoms were injected in the form of particles. This method adds valuable insight into the development of technologies like laser ablation ICP-MS where aerosol particles (of relatively unknown size and gas concentration) are generated during ablation and then transported into the plasma of an ICP-MS. In this study, we characterized aerosol detection efficiencies of volatile species gold and silver along with refractory species aluminum oxide, cerium oxide, and yttrium oxide. Aerosols were generated with electrical mobility diameters ranging from 100 to 1000 nm. In general, it was observed that refractory species had lower aerosol detection efficiencies than volatile species, and there were strong dependencies on particle size and plasma torch residence time. Volatile species showed a distinct transition point at which aerosol detection efficiency began decreasing with increasing particle size. This critical diameter indicated the largest particle size for which complete particle detection should be expected and agreed with theories published in other works. Aerosol detection efficiencies also displayed power law dependencies on particle size. Aerosol detection efficiencies ranged from 10- 5 to 10- 11. Free molecular heat and mass transfer theory was applied, but

  9. Aerosol detection efficiency in inductively coupled plasma mass spectrometry

    DOE PAGES

    Hubbard, Joshua A.; Zigmond, Joseph A.

    2016-03-02

    We used an electrostatic size classification technique to segregate particles of known composition prior to being injected into an inductively coupled plasma mass spectrometer (ICP-MS). Moreover, we counted size-segregated particles with a condensation nuclei counter as well as sampled with an ICP-MS. By injecting particles of known size, composition, and aerosol concentration into the ICP-MS, efficiencies of the order of magnitude aerosol detection were calculated, and the particle size dependencies for volatile and refractory species were quantified. Similar to laser ablation ICP-MS, aerosol detection efficiency was defined as the rate at which atoms were detected in the ICP-MS normalized bymore » the rate at which atoms were injected in the form of particles. This method adds valuable insight into the development of technologies like laser ablation ICP-MS where aerosol particles (of relatively unknown size and gas concentration) are generated during ablation and then transported into the plasma of an ICP-MS. In this study, we characterized aerosol detection efficiencies of volatile species gold and silver along with refractory species aluminum oxide, cerium oxide, and yttrium oxide. Aerosols were generated with electrical mobility diameters ranging from 100 to 1000 nm. In general, it was observed that refractory species had lower aerosol detection efficiencies than volatile species, and there were strong dependencies on particle size and plasma torch residence time. Volatile species showed a distinct transition point at which aerosol detection efficiency began decreasing with increasing particle size. This critical diameter indicated the largest particle size for which complete particle detection should be expected and agreed with theories published in other works. Aerosol detection efficiencies also displayed power law dependencies on particle size. Aerosol detection efficiencies ranged from 10-5 to 10-11. Free molecular heat and mass transfer theory was

  10. Airborne Measurements of Aerosol Size Distributions During PACDEX

    NASA Astrophysics Data System (ADS)

    Rogers, D. C.; Gandrud, B.; Campos, T.; Kok, G.; Stith, J.

    2007-12-01

    The Pacific Dust Experiment (PACDEX) is an airborne project that attempts to characterize the indirect aerosol effect by tracing plumes of dust and pollution across the Pacific Ocean. This project occurred during April-May 2007 and used the NSF/NCAR HIAPER research aircraft. When a period of strong generation of dust particles and pollution was detected by ground-based and satellite sensors, then the aircraft was launched from Colorado to Alaska, Hawaii, and Japan. Its mission was to intercept and track these plumes from Asia, across the Pacific Ocean, and ultimately to the edges of North America. For more description, see the abstract by Stith and Ramanathan (this conference) and other companion papers on PACDEX. The HIAPER aircraft carried a wide variety of sensors for measuring aerosols, cloud particles, trace gases, and radiation. Sampling was made in several weather regimes, including clean "background" air, dust and pollution plumes, and regions with cloud systems. Altitude ranges extended from 100 m above the ocean to 13.4 km. This paper reports on aerosol measurements made with a new Ultra-High Sensitivity Aerosol Spectrometer (UHSAS), a Radial Differential Mobility Analyzer (RDMA), a water-based CN counter, and a Cloud Droplet Probe (CDP). These cover the size range 10 nm to 10 um diameter. In clear air, dust was detected with the UHSAS and CDP. Polluted air was identified with high concentrations of carbon monoxide, ozone, and CN. Aerosol size distributions will be presented, along with data to define the context of weather regimes.

  11. Subarctic atmospheric aerosol composition: 2. Hygroscopic growth properties

    SciTech Connect

    Herich, Hanna; Kammermann, Lukas; Friedman, Beth; Gross, Deborah S.; Weingartner, E.; Lohmann, U.; Spichtinger, Peter; Gysel, Martin; Baltensperger, Urs; Cziczo, Daniel J.

    2009-07-10

    Sub-arctic aerosols were sampled during July 2007 at the Abisko Scientific Research Station Stordalen site in northern Sweden with an instrument setup consisting of a custom-built Hygroscopicity Tandem Differential Mobility Analyzer (HTDMA) connected in series to a single particle mass spectrometer. Aerosol chemical composition in the form of bipolar single particle mass spectra was determined as a function of hygroscopic growth both in situ and in real time. The HTDMA was deployed at a relative humidity of 82% and particles with a dry mobility diameter of 260 nm were selected. Aerosols from two distinct airmasses were analyzed during the sampling period. Sea salt aerosols were found to be the dominant particle group with the highest hygroscopicity. High intensities of sodium and related peaks in the mass spectra were identified as exclusive markers for large hygroscopic growth. Particles from biomass combustion were found to be the least hygroscopic aerosol category. Species normally considered soluble (e.g., sulfates and nitrates) were found in particles ranging from high to low hygroscopicity. Furthermore, the signal intensities of the peaks related to these species did not correlate with hygroscopicity.

  12. OLYMPEX Counterflow Spectrometer and Impactor Field Campaign Report

    SciTech Connect

    Poellot, Michael

    2016-07-01

    The U.S. Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) Climate Research Facility’s ARM Aerial Facility (AAF) Counterflow Spectrometer and Impactor (CSI) probe was flown on the University of North Dakota Cessna Citation research aircraft during the Olympic Mountain Experiment (OLYMPEX). The field campaign took place from November 12 through December 19, 2015, over the Olympic Mountains and coastal waters of Washington State as part of a National Aeronautics and Space Administration (NASA) Global Precipitation Measurement (GPM) validation campaign. The CSI was added to the Citation instrument suite to support the NASA Aerosol-Cloud Ecosystem (ACE) satellite program and flights of the NASA Lockheed Earth Resources (ER-2) aircraft. ACE funded extra ER-2 flights to focus on clouds that are weakly precipitating, which are also of interest to the DOE Atmospheric System Research (ASR) program.

  13. Volcanic Aerosol Radiative Properties

    NASA Technical Reports Server (NTRS)

    Lacis, Andrew

    2015-01-01

    Large sporadic volcanic eruptions inject large amounts of sulfur bearing gases into the stratosphere which then get photochemically converted to sulfuric acid aerosol droplets that exert a radiative cooling effect on the global climate system lasting for several years.

  14. Palaeoclimate: Aerosols and rainfall

    NASA Astrophysics Data System (ADS)

    Partin, Jud

    2015-03-01

    Instrumental records have hinted that aerosol emissions may be shifting rainfall over Central America southwards. A 450-year-long precipitation reconstruction indicates that this shift began shortly after the Industrial Revolution.

  15. Exploiting a Transmission Grating Spectrometer

    SciTech Connect

    Ronald E. Bell

    2004-12-08

    The availability of compact transmission grating spectrometers now allows an attractive and economical alternative to the more familiar Czerny-Turner configuration for many high-temperature plasma applications. Higher throughput is obtained with short focal length refractive optics and stigmatic imaging. Many more spectra can be obtained with a single spectrometer since smaller, more densely packed optical input fibers can be used. Multiple input slits, along with a bandpass filter, can be used to maximize the number of spectra per detector, providing further economy. Curved slits can correct for the strong image curvature of the short focal length optics. Presented here are the governing grating equations for both standard and high-dispersion transmission gratings, defining dispersion, image curvature, and desired slit curvature, that can be used in the design of improved plasma diagnostics.

  16. The lofting of Western Pacific regional aerosol by island thermodynamics as observed around Borneo

    NASA Astrophysics Data System (ADS)

    Robinson, N. H.; Allan, J. D.; Trembath, J. A.; Rosenberg, P. D.; Allen, G.; Coe, H.

    2012-07-01

    Vertical profiles of aerosol chemical composition, number concentration and size were measured throughout the lower troposphere of Borneo, a large tropical island in the western Pacific Ocean. Aerosol composition, size and number concentration measurements (using an Aerodyne Aerosol Mass Spectrometer, Passive Cavity Aerosol Spectrometer Probe and Condensation Particle Counter, respectively) were made both upwind and downwind of Borneo, as well as over the island itself, on board the UK BAe-146 research aircraft as part of the OP3 project. Two meteorological regimes were identified - one dominated by isolated terrestrial convection (ITC) which peaked in the afternoon, and the other characterised by more regionally active mesoscale convective systems (MCS). Upwind profiles show aerosol to be confined to a shallow marine boundary layer below 930 ± 10 hPa (~760 m above sea level, a.s.l.). As this air mass advects over the island with the mean free troposphere synoptic flow during the ITC-dominated regime, it is convectively lofted above the terrestrial surface mixed layer to heights of between 945 ± 22 (~630 m a.s.l.) and 740 ± 44 hPa (~2740 m a.s.l.), consistent with a coupling between the synoptic steering level flow and island sea breeze circulations. Terrestrial aerosol was observed to be lofted into this higher layer through both moist convective uplift and transport through turbulent diurnal sea-breeze cells. At the peak of convective activity in the mid-afternoons, organic aerosol loadings in the lofted layer were observed to be substantially higher than in the morning (by a mean factor of three). This organic matter is dominated by secondary aerosol from processing of biogenic gas phase precursors. Aerosol number concentration profiles suggest formation of new particles aloft in the atmosphere. By the time the air mass reaches the west coast of the island, terrestrial aerosol is enhanced in the lofted layer. Such uplift of aerosol in Borneo is expected to

  17. Emergency Protection from Aerosols

    SciTech Connect

    Cristy, G.A.

    2001-11-13

    Expedient methods were developed that could be used by an average person, using only materials readily available, to protect himself and his family from injury by toxic (e.g., radioactive) aerosols. The most effective means of protection was the use of a household vacuum cleaner to maintain a small positive pressure on a closed house during passage of the aerosol cloud. Protection factors of 800 and above were achieved.

  18. Monodisperse aerosol generator

    DOEpatents

    Ortiz, Lawrence W.; Soderholm, Sidney C.

    1990-01-01

    An aerosol generator is described which is capable of producing a monodisperse aerosol within narrow limits utilizing an aqueous solution capable of providing a high population of seed nuclei and an organic solution having a low vapor pressure. The two solutions are cold nebulized, mixed, vaporized, and cooled. During cooling, particles of the organic vapor condense onto the excess seed nuclei, and grow to a uniform particle size.

  19. Portable Tandem Mass Spectrometer Analyzer

    DTIC Science & Technology

    1991-07-01

    The planned instrument was to be small enough to be portable in small vehicles and was to be able to use either an atmospheric pressure ion source or a...conventional electron impact/chemical ionization ion source. In order to accomplish these developments an atmospheric pressure ionization source was...developed for a compact, commercially available tandem quadrupole mass spectrometer. This ion source could be readily exchanged with the conventional

  20. Two-Column Aerosol Project (TCAP) Field Campaign Report

    SciTech Connect

    Berg, Larry K

    2016-05-01

    This study included the deployment of the Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) Climate Research Facility’s Mobile Facility (AMF), ARM Mobile Aerosol Observing System (MAOS) and the ARM Aerial Facility (AAF). The study was a collaborative effort involving scientists from DOE national laboratories, NOAA, NASA, and universities. The AAF and MAOS were deployed for two approximately month-long Intensive Operational Periods (IOPs) conducted in June 2012 and February 2013. Seasonal differences in the aerosol chemical and optical properties observed using the AMF, AAF, and MAOS are presented in this report. The total mass loading of aerosol is found to be much greater in the summer than in the winter, with the difference associated with greater amounts of organic aerosol. The mass fraction of organic aerosol is much reduced in the winter, when sulfate is the dominant aerosol type. Surprisingly, very little sea-salt aerosol was observed in the summer. In contrast, much more sea salt aerosol was observed in the winter. The mass loading of black carbon is nearly the same in both seasons. These differences lead to a relative increase in the aerosol light absorption in the winter and an associated decrease in observed single-scattering albedo. Measurements of aerosol mixing state were made using a single-particle mass spectrometer, which showed that the majority of the summertime aerosol consisted of organic compounds mixed with various amounts of sulfate. A number of other findings are also summarized in the report, including: impact of aerosol layers aloft on the column aerosol optical depth; documentation of the aerosol properties at the AMF; differences in the aerosol properties associated with both columns, which are not systematic but reflect the complicated meteorological and chemical processes that impact aerosol as it is advected away from North America; and new instruments and data-processing techniques for measuring both aerosol and

  1. Huygens Probe Aerosol Collector Pyrolyser Experiment

    NASA Astrophysics Data System (ADS)

    Israel, M.; Cabane, J.-F.; Brun, G.; Niemann, S.; Way, H.; Riedler, W.; Steller, M.; Raulin, F.; Coscia, D.

    2002-07-01

    ACP's main objective is the chemical analysis of the aerosols in Titan's atmosphere. For this purpose, it will sample the aerosols during descent and prepare the collected matter (by evaporation, pyrolysis and gas products transfer) for analysis by the Huygens Gas Chromatograph Mass Spectrometer (GCMS). A sampling system is required for sampling the aerosols in the 135-32 km and 22-17 km altitude regions of Titan's atmosphere. A pump unit is used to force the gas flow through a filter. In its sampling position, the filter front face extends a few mm beyond the inlet tube. The oven is a pyrolysis furnace where a heating element can heat the filter and hence the sampled aerosols to 250°C or 600°C. The oven contains the filter, which has a thimble-like shape (height 28 mm). For transferring effluent gas and pyrolysis products to GCMS, the carrier gas is a labeled nitrogen 15N2, to avoid unwanted secondary reactions with Titan's atmospheric nitrogen. Aeraulic tests under cold temperature conditions were conducted by using a cold gas test system developed by ONERA. The objective of the test was to demonstrate the functional ability of the instrument during the descent of the probe and to understand its thermal behavior, that is to test the performance of all its components, pump unit and mechanisms. In order to validate ACP's scientific performance, pyrolysis tests were conducted at LISA on solid phase material synthesized from experimental simulation. The chromatogram obtained by GCMS analysis shows many organic compounds. Some GC peaks appear clearly from the total mass spectra, with specific ions well identified thanks to the very high sensitivity of the mass spectrometer. The program selected for calibrating the flight model is directly linked to the GCMS calibration plan. In order not to pollute the two flight models with products of solid samples such as tholins, we excluded any direct pyrolysis tests through the ACP oven during the first phase of the

  2. Huygens Probe Aerosol Collector Pyrolyser Experiment

    NASA Astrophysics Data System (ADS)

    Israel, G.; Cabane, M.; Brun, J.-F.; Niemann, H.; Way, S.; Riedler, W.; Steller, M.; Raulin, F.; Coscia, D.

    2002-07-01

    ACP's main objective is the chemical analysis of the aerosols in Titan's atmosphere. For this purpose, it will sample the aerosols during descent and prepare the collected matter (by evaporation, pyrolysis and gas products transfer) for analysis by the Huygens Gas Chromatograph Mass Spectrometer (GCMS). A sampling system is required for sampling the aerosols in the 135'32 km and 22'17 km altitude regions of Titan's atmosphere. A pump unit is used to force the gas flow through a filter. In its sampling position, the filter front face extends a few mm beyond the inlet tube. The oven is a pyrolysis furnace where a heating element can heat the filter and hence the sampled aerosols to 250 °C or 600 °C. The oven contains the filter, which has a thimble-like shape (height 28 mm). For transferring effluent gas and pyrolysis products to GCMS, the carrier gas is a labeled nitrogen 15N2, to avoid unwanted secondary reactions with Titan's atmospheric nitrogen. Aeraulic tests under cold temperature conditions were conducted by using a cold gas test system developed by ONERA. The objective of the test was to demonstrate the functional ability of the instrument during the descent of the probe and to understand its thermal behavior, that is to test the performance of all its components, pump unit and mechanisms. In order to validate ACP's scientific performance, pyrolysis tests were conducted at LISA on solid phase material synthesized from experimental simulation. The chromatogram obtained by GCMS analysis shows many organic compounds. Some GC peaks appear clearly from the total mass spectra, with specific ions well identified thanks to the very high sensitivity of the mass spectrometer. The program selected for calibrating the flight model is directly linked to the GCMS calibration plan. In order not to pollute the two flight models with products of solid samples such as tholins, we excluded any direct pyrolysis tests through the ACP oven during the first phase of the

  3. Incremental Reactivity Effects of Anthropogenic and Biogenic Volatile Organic Compounds on Secondary Organic Aerosol Formation

    NASA Astrophysics Data System (ADS)

    Kacarab, M.; Li, L.; Carter, W. P. L.; Cocker, D. R., III

    2015-12-01

    Two surrogate reactive organic gas (ROG) mixtures were developed to create a controlled reactivity environment simulating different urban atmospheres with varying levels of anthropogenic (e.g. Los Angeles reactivity) and biogenic (e.g. Atlanta reactivity) influences. Traditional chamber experiments focus on the oxidation of one or two volatile organic compound (VOC) precursors, allowing the reactivity of the system to be dictated by those compounds. Surrogate ROG mixtures control the overall reactivity of the system, allowing for the incremental aerosol formation from an added VOC to be observed. The surrogate ROG mixtures were developed based on that used to determine maximum incremental reactivity (MIR) scales for O3 formation from VOC precursors in a Los Angeles smog environment. Environmental chamber experiments were designed to highlight the incremental aerosol formation in the simulated environment due to the addition of an added anthropogenic (aromatic) or biogenic (terpene) VOC. All experiments were conducted in the UC Riverside/CE-CERT dual 90m3 environmental chambers. It was found that the aerosol precursors behaved differently under the two altered reactivity conditions, with more incremental aerosol being formed in the anthropogenic ROG system than in the biogenic ROG system. Further, the biogenic reactivity condition inhibited the oxidation of added anthropogenic aerosol precursors, such as m-xylene. Data will be presented on aerosol properties (density, volatility, hygroscopicity) and bulk chemical composition in the gas and particle phases (from a SYFT Technologies selected ion flow tube mass spectrometer, SIFT-MS, and Aerodyne high resolution time of flight aerosol mass spectrometer, HR-ToF-AMS, respectively) comparing the two controlled reactivity systems and single precursor VOC/NOx studies. Incremental aerosol yield data at different controlled reactivities provide a novel and valuable insight in the attempt to extrapolate environmental chamber

  4. Expanding the CRISPR Toolbox: Targeting RNA with Cas13b.

    PubMed

    Barrangou, Rodolphe; Gersbach, Charles A

    2017-02-16

    In this issue of Molecular Cell, Smargon et al. (2017) unearth Cas13b from type VI-B CRISPR-Cas immune systems and characterize its RNA-guided, RNA-targeting activity, including regulation by the novel co-factors Csx27 and Csx28, as well as non-specific collateral RNA damage.

  5. Using CAS to Solve a Mathematics Task: A Deconstruction

    ERIC Educational Resources Information Center

    Berger, Margot

    2010-01-01

    I investigate how and whether a heterogeneous group of first-year university mathematics students in South Africa harness the potential power of a computer algebra system (CAS) when doing a specific mathematics task. In order to do this, I develop a framework for deconstructing a mathematics task requiring the use of CAS, into its primary…

  6. Calibrated Ancillary System (CAS) user's guide, volume 2

    NASA Technical Reports Server (NTRS)

    1986-01-01

    The Calibrated Ancillary System (CAS) provides real-time calibrated parameters from the orbiter downlink (ancillary data) to the Goddard Space Flight Center (GSFC). This user's guide contains the introduction to the equipment, operation, general procedures, and specific procedures of CAS. Volume 2 describes the central status and control (CSAC) procedures, supervisor procedures, and logging procedures.

  7. Calibrated Ancillary System (CAS) user's guide, volume 3

    NASA Technical Reports Server (NTRS)

    1986-01-01

    The Calibrated Ancillary System (CAS) provides real-time calibrated parameters from the orbiter downlink (ancillary data) to the Goddard Space Flight Center (GSFC). This user's guide contains the introduction to the equipment, operation, general procedures, and specific procedures of the CAS. Volume 3 describes logging and delogging procedures, real-time procedures, and error messages.

  8. Calibrated Ancillary System (CAS) user's guide, volume 8

    NASA Technical Reports Server (NTRS)

    1986-01-01

    The Calibrated Ancillary System (CAS) provides real-time calibrated parameters from the orbiter downlink (ancillary data) to the Goddard Space Flight Center (GSFC). This user's guide contains the introduction to the equipment, operation, general procedures, and specific procedures of CAS. Volume 8 describes procedures for invoking checkout software, file maintenance procedures, system manager procedures.

  9. Transformation of OODT CAS to Perform Larger Tasks

    NASA Technical Reports Server (NTRS)

    Mattmann, Chris; Freeborn, Dana; Crichton, Daniel; Hughes, John; Ramirez, Paul; Hardman, Sean; Woollard, David; Kelly, Sean

    2008-01-01

    A computer program denoted OODT CAS has been transformed to enable performance of larger tasks that involve greatly increased data volumes and increasingly intensive processing of data on heterogeneous, geographically dispersed computers. Prior to the transformation, OODT CAS (also alternatively denoted, simply, 'CAS') [wherein 'OODT' signifies 'Object-Oriented Data Technology' and 'CAS' signifies 'Catalog and Archive Service'] was a proven software component used to manage scientific data from spaceflight missions. In the transformation, CAS was split into two separate components representing its canonical capabilities: file management and workflow management. In addition, CAS was augmented by addition of a resource-management component. This third component enables CAS to manage heterogeneous computing by use of diverse resources, including high-performance clusters of computers, commodity computing hardware, and grid computing infrastructures. CAS is now more easily maintainable, evolvable, and reusable. These components can be used separately or, taking advantage of synergies, can be used together. Other elements of the transformation included addition of a separate Web presentation layer that supports distribution of data products via Really Simple Syndication (RSS) feeds, and provision for full Resource Description Framework (RDF) exports of metadata.

  10. Optimization of genome editing through CRISPR-Cas9 engineering.

    PubMed

    Zhang, Jian-Hua; Adikaram, Poorni; Pandey, Mritunjay; Genis, Allison; Simonds, William F

    2016-04-01

    CRISPR (Clustered Regularly-Interspaced Short Palindromic Repeats)-Cas9 (CRISPR associated protein 9) has rapidly become the most promising genome editing tool with great potential to revolutionize medicine. Through guidance of a 20 nucleotide RNA (gRNA), CRISPR-Cas9 finds and cuts target protospacer DNA precisely 3 base pairs upstream of a PAM (Protospacer Adjacent Motif). The broken DNA ends are repaired by either NHEJ (Non-Homologous End Joining) resulting in small indels, or by HDR (Homology Directed Repair) for precise gene or nucleotide replacement. Theoretically, CRISPR-Cas9 could be used to modify any genomic sequences, thereby providing a simple, easy, and cost effective means of genome wide gene editing. However, the off-target activity of CRISPR-Cas9 that cuts DNA sites with imperfect matches with gRNA have been of significant concern because clinical applications require 100% accuracy. Additionally, CRISPR-Cas9 has unpredictable efficiency among different DNA target sites and the PAM requirements greatly restrict its genome editing frequency. A large number of efforts have been made to address these impeding issues, but much more is needed to fully realize the medical potential of CRISPR-Cas9. In this article, we summarize the existing problems and current advances of the CRISPR-Cas9 technology and provide perspectives for the ultimate perfection of Cas9-mediated genome editing.

  11. Reaction to Indispensable Manual Calculation Skills in a CAS Environment.

    ERIC Educational Resources Information Center

    Monaghan, John

    2001-01-01

    Reacts to an article published in a previous issue of this journal on the effects of graphing calculators and computer algebra systems (CAS) on students' manual calculation and algebraic manipulation skills. Considers the contribution made by Jean-Baptiste Lagrange to thinking about the role of CAS in teaching algebra. (ASK)

  12. 48 CFR 9903.201-2 - Types of CAS coverage.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ...) Receive a single CAS-covered contract award of $50 million or more; or (2) Received $50 million or more in... business unit receives a single CAS-covered contract award of $50 million or more, that contract must be... institution that operate as independent organizational entities under the auspices of the parent...

  13. From Calculus to Dynamical Systems through DGS and CAS

    ERIC Educational Resources Information Center

    García, Jeanett López; Zamudio, Jorge Javier Jiménez

    2015-01-01

    Several factors have motivated the use of CAS or DGS in the teaching-learning process, such as: the development of new technologies, the availability of computers, and the widespread use of the Internet, among others. Even more, the trend to include CAS and DGS in the curricula of some undergraduate studies has resulted in the instruction of the…

  14. Teaching Undergraduate Mathematics Using CAS Technology: Issues and Prospects

    ERIC Educational Resources Information Center

    Tobin, Patrick C.; Weiss, Vida

    2016-01-01

    The use of handheld CAS technology in undergraduate mathematics courses in Australia is paradoxically shrinking under sustained disapproval or disdain from the professional mathematics community. Mathematics education specialists argue with their mathematics colleagues over a range of issues in course development and this use of CAS or even…

  15. Towards Improved MODIS Aerosol Retrieval over the US East Coast Region: Re-examining the Aerosol Model and Surface Assumptions

    NASA Technical Reports Server (NTRS)

    Levy, R. C.; Remer, L. A.; Kaufman, Y. J.; Holben, B. N.

    2002-01-01

    The MODerate resolution Imaging Spectrometer (MODIS) aboard the Terra and recently the Aqua platform, produces a set of aerosol products over both ocean and land regions. Previous validation efforts have shown that from a global perspective, aerosol optical depth (AOD) is successfully retrieved from MODIS. Even over coastal regions, the over- land and over-ocean retrievals are consistent with each other, and well matched with ground-based sunphotometer measurements (such as AERONET). However, the East Coast of the United States is one region where there is consistently a discrepancy between land and ocean retrievals. Over the ocean, MODIS AODs are consistent with coastal sunphotometer measurements, but over land, AODs are consistently over- estimated. In this study we use field data from the Chesapeake Lighthouse and Aircraft Measurements for Satellites experiment (CLAMS), (held during summer 2001) to determine the aerosol properties at a number of sites. Using the 6-S radiative transfer package, we compute simulated satellite radiances and compare them with observed MODIS radiances. We believe that the AOD over-estimation is not likely due to an incorrect choice of the urban/industrial aerosol models. Using 6-S to do an atmospheric correction for a very low AOD case, we show rather, that the discrepancies are likely a result of incorrect assumptions about the surface reflectance properties. Understanding and improving MODIS retrievals over the East Coast will not only improve the global quality of MODIS, but also would enable the use of MODIS as a tool for monitoring regional aerosol events.

  16. Validation of LIRIC aerosol concentration retrievals using airborne measurements during a biomass burning episode over Athens

    NASA Astrophysics Data System (ADS)

    Kokkalis, Panagiotis; Amiridis, Vassilis; Allan, James D.; Papayannis, Alexandros; Solomos, Stavros; Binietoglou, Ioannis; Bougiatioti, Aikaterini; Tsekeri, Alexandra; Nenes, Athanasios; Rosenberg, Philip D.; Marenco, Franco; Marinou, Eleni; Vasilescu, Jeni; Nicolae, Doina; Coe, Hugh; Bacak, Asan; Chaikovsky, Anatoli

    2017-01-01

    In this paper we validate the Lidar-Radiometer Inversion Code (LIRIC) retrievals of the aerosol concentration in the fine mode, using the airborne aerosol chemical composition dataset obtained over the Greater Athens Area (GAA) in Greece, during the ACEMED campaign. The study focuses on the 2nd of September 2011, when a long-range transported smoke layer was observed in the free troposphere over Greece, in the height range from 2 to 3 km. CIMEL sun-photometric measurements revealed high AOD ( 0.4 at 532 nm) and Ångström exponent values ( 1.7 at 440/870 nm), in agreement with coincident ground-based lidar observations. Airborne chemical composition measurements performed over the GAA, revealed increased CO volume concentration ( 110 ppbv), with 57% sulphate dominance in the PM1 fraction. For this case, we compare LIRIC retrievals of the aerosol concentration in the fine mode with the airborne Aerosol Mass Spectrometer (AMS) and Passive Cavity Aerosol Spectrometer Probe (PCASP) measurements. Our analysis shows that the remote sensing retrievals are in a good agreement with the measured airborne in-situ data from 2 to 4 km. The discrepancies observed between LIRIC and airborne measurements at the lower troposphere (below 2 km), could be explained by the spatial and temporal variability of the aerosol load within the area where the airborne data were averaged along with the different time windows of the retrievals.

  17. RACORO aerosol data processing

    SciTech Connect

    Elisabeth Andrews

    2011-10-31

    The RACORO aerosol data (cloud condensation nuclei (CCN), condensation nuclei (CN) and aerosol size distributions) need further processing to be useful for model evaluation (e.g., GCM droplet nucleation parameterizations) and other investigations. These tasks include: (1) Identification and flagging of 'splash' contaminated Twin Otter aerosol data. (2) Calculation of actual supersaturation (SS) values in the two CCN columns flown on the Twin Otter. (3) Interpolation of CCN spectra from SGP and Twin Otter to 0.2% SS. (4) Process data for spatial variability studies. (5) Provide calculated light scattering from measured aerosol size distributions. Below we first briefly describe the measurements and then describe the results of several data processing tasks that which have been completed, paving the way for the scientific analyses for which the campaign was designed. The end result of this research will be several aerosol data sets which can be used to achieve some of the goals of the RACORO mission including the enhanced understanding of cloud-aerosol interactions and improved cloud simulations in climate models.

  18. Vertical distribution of aerosol number concentration in the troposphere over Siberia derived from airborne in-situ measurements

    NASA Astrophysics Data System (ADS)

    Arshinov, Mikhail Yu.; Belan, Boris D.; Paris, Jean-Daniel; Machida, Toshinobu; Kozlov, Alexandr; Malyskin, Sergei; Simonenkov, Denis; Davydov, Denis; Fofonov, Alexandr

    2016-04-01

    Knowledge of the vertical distribution of aerosols particles is very important when estimating aerosol radiative effects. To date there are a lot of research programs aimed to study aerosol vertical distribution, but only a few ones exist in such insufficiently explored region as Siberia. Monthly research flights and several extensive airborne campaigns carried out in recent years in Siberian troposphere allowed the vertical distribution of aerosol number concentration to be summarized. In-situ aerosol measurements were performed in a wide range of particle sizes by means of improved version of the Novosibirsk-type diffusional particle sizer and GRIMM aerosol spectrometer Model 1.109. The data on aerosol vertical distribution enabled input parameters for the empirical equation of Jaenicke (1993) to be derived for Siberian troposphere up to 7 km. Vertical distributions of aerosol number concentration in different size ranges averaged for the main seasons of the year will be presented. This work was supported by Interdisciplinary integration projects of the Siberian Branch of the Russian Academy of Science No. 35, No. 70 and No. 131; the Branch of Geology, Geophysics and Mining Sciences of RAS (Program No. 5); and Russian Foundation for Basic Research (grant No. 14-05-00526). Jaenicke R. Tropospheric aerosols, in Aerosol-Cloud-Climate Interactions, edited by P.V. Hobs. -Academic Press, San Diego, CA, 1993.- P. 1-31.

  19. CRISPR-Cas Technologies and Applications in Food Bacteria.

    PubMed

    Stout, Emily; Klaenhammer, Todd; Barrangou, Rodolphe

    2017-02-28

    Clustered regularly interspaced short palindromic repeats (CRISPRs) and CRISPR-associated (Cas) proteins form adaptive immune systems that occur in many bacteria and most archaea. In addition to protecting bacteria from phages and other invasive mobile genetic elements, CRISPR-Cas molecular machines can be repurposed as tool kits for applications relevant to the food industry. A primary concern of the food industry has long been the proper management of food-related bacteria, with a focus on both enhancing the outcomes of beneficial microorganisms such as starter cultures and probiotics and limiting the presence of detrimental organisms such as pathogens and spoilage microorganisms. This review introduces CRISPR-Cas as a novel set of technologies to manage food bacteria and offers insights into CRISPR-Cas biology. It primarily focuses on the applications of CRISPR-Cas systems and tools in starter cultures and probiotics, encompassing strain-typing, phage resistance, plasmid vaccination, genome editing, and antimicrobial activity.

  20. Cas9-mediated targeting of viral RNA in eukaryotic cells.

    PubMed

    Price, Aryn A; Sampson, Timothy R; Ratner, Hannah K; Grakoui, Arash; Weiss, David S

    2015-05-12

    Clustered, regularly interspaced, short palindromic repeats-CRISPR associated (CRISPR-Cas) systems are prokaryotic RNA-directed endonuclease machineries that act as an adaptive immune system against foreign genetic elements. Using small CRISPR RNAs that provide specificity, Cas proteins recognize and degrade nucleic acids. Our previous work demonstrated that the Cas9 endonuclease from Francisella novicida (FnCas9) is capable of targeting endogenous bacterial RNA. Here, we show that FnCas9 can be directed by an engineered RNA-targeting guide RNA to target and inhibit a human +ssRNA virus, hepatitis C virus, within eukaryotic cells. This work reveals a versatile and portable RNA-targeting system that can effectively function in eukaryotic cells and be programmed as an antiviral defense.

  1. Cas9-mediated targeting of viral RNA in eukaryotic cells

    PubMed Central

    Price, Aryn A.; Sampson, Timothy R.; Ratner, Hannah K.; Grakoui, Arash; Weiss, David S.

    2015-01-01

    Clustered, regularly interspaced, short palindromic repeats–CRISPR associated (CRISPR-Cas) systems are prokaryotic RNA-directed endonuclease machineries that act as an adaptive immune system against foreign genetic elements. Using small CRISPR RNAs that provide specificity, Cas proteins recognize and degrade nucleic acids. Our previous work demonstrated that the Cas9 endonuclease from Francisella novicida (FnCas9) is capable of targeting endogenous bacterial RNA. Here, we show that FnCas9 can be directed by an engineered RNA-targeting guide RNA to target and inhibit a human +ssRNA virus, hepatitis C virus, within eukaryotic cells. This work reveals a versatile and portable RNA-targeting system that can effectively function in eukaryotic cells and be programmed as an antiviral defense. PMID:25918406

  2. Diversity and evolution of class 2 CRISPR-Cas systems.

    PubMed

    Shmakov, Sergey; Smargon, Aaron; Scott, David; Cox, David; Pyzocha, Neena; Yan, Winston; Abudayyeh, Omar O; Gootenberg, Jonathan S; Makarova, Kira S; Wolf, Yuri I; Severinov, Konstantin; Zhang, Feng; Koonin, Eugene V

    2017-03-01

    Class 2 CRISPR-Cas systems are characterized by effector modules that consist of a single multidomain protein, such as Cas9 or Cpf1. We designed a computational pipeline for the discovery of novel class 2 variants and used it to identify six new CRISPR-Cas subtypes. The diverse properties of these new systems provide potential for the development of versatile tools for genome editing and regulation. In this Analysis article, we present a comprehensive census of class 2 types and class 2 subtypes in complete and draft bacterial and archaeal genomes, outline evolutionary scenarios for the independent origin of different class 2 CRISPR-Cas systems from mobile genetic elements, and propose an amended classification and nomenclature of CRISPR-Cas.

  3. Guide RNA engineering for versatile Cas9 functionality

    PubMed Central

    Nowak, Chance M.; Lawson, Seth; Zerez, Megan; Bleris, Leonidas

    2016-01-01

    The Clustered Regularly Interspaced Short Palindromic Repeats system allows a single guide RNA (sgRNA) to direct a protein with combined helicase and nuclease activity to the DNA. Streptococcus pyogenes Cas9 (SpCas9), a CRISPR-associated protein, has revolutionized our ability to probe and edit the human genome in vitro and in vivo. Arguably, the true modularity of the Cas9 platform is conferred through the ease of sgRNA programmability as well as the degree of modifications the sgRNA can tolerate without compromising its association with SpCas9 and function. In this review, we focus on the properties and recent engineering advances of the sgRNA component in Cas9-mediated genome targeting. PMID:27733506

  4. Biomass Burning Aerosol Absorption Measurements with MODIS Using the Critical Reflectance Method

    NASA Technical Reports Server (NTRS)

    Zhu, Li; Martins, Vanderlei J.; Remer, Lorraine A.

    2010-01-01

    This research uses the critical reflectance technique, a space-based remote sensing method, to measure the spatial distribution of aerosol absorption properties over land. Choosing two regions dominated by biomass burning aerosols, a series of sensitivity studies were undertaken to analyze the potential limitations of this method for the type of aerosol to be encountered in the selected study areas, and to show that the retrieved results are relatively insensitive to uncertainties in the assumptions used in the retrieval of smoke aerosol. The critical reflectance technique is then applied to Moderate Resolution Imaging Spectrometer (MODIS) data to retrieve the spectral aerosol single scattering albedo (SSA) in South African and South American 35 biomass burning events. The retrieved results were validated with collocated Aerosol Robotic Network (AERONET) retrievals. One standard deviation of mean MODIS retrievals match AERONET products to within 0.03, the magnitude of the AERONET uncertainty. The overlap of the two retrievals increases to 88%, allowing for measurement variance in the MODIS retrievals as well. The ensemble average of MODIS-derived SSA for the Amazon forest station is 0.92 at 670 nm, and 0.84-0.89 for the southern African savanna stations. The critical reflectance technique allows evaluation of the spatial variability of SSA, and shows that SSA in South America exhibits higher spatial variation than in South Africa. The accuracy of the retrieved aerosol SSA from MODIS data indicates that this product can help to better understand 44 how aerosols affect the regional and global climate.

  5. Quantification of black carbon mixing state from traffic: Implications for aerosol optical properties

    SciTech Connect

    Willis, Megan D.; Healy, Robert M.; Riemer, Nicole; West, Matthew; Wang, Jon M.; Jeong, Cheol -Heon; Wenger, John C.; Evans, Greg J.; Abbatt, Jonathan P. D.; Lee, Alex K. Y.

    2016-04-14

    The climatic impacts of black carbon (BC) aerosol, an important absorber of solar radiation in the atmosphere, remain poorly constrained and are intimately related to its particle-scale physical and chemical properties. Using particle-resolved modelling informed by quantitative measurements from a soot-particle aerosol mass spectrometer, we confirm that the mixing state (the distribution of co-emitted aerosol amongst fresh BC-containing particles) at the time of emission significantly affects BC-aerosol optical properties even after a day of atmospheric processing. Both single particle and ensemble aerosol mass spectrometry observations indicate that BC near the point of emission co-exists with hydrocarbon-like organic aerosol (HOA) in two distinct particle types: HOA-rich and BC-rich particles. The average mass fraction of black carbon in HOA-rich and BC-rich particle classes was  < 0.1 and 0.8, respectively. Notably, approximately 90 % of BC mass resides in BC-rich particles. This new measurement capability provides quantitative insight into the physical and chemical nature of BC-containing particles and is used to drive a particle-resolved aerosol box model. Lastly, significant differences in calculated single scattering albedo (an increase of 0.1) arise from accurate treatment of initial particle mixing state as compared to the assumption of uniform aerosol composition at the point of BC injection into the atmosphere.

  6. Quantification of black carbon mixing state from traffic: Implications for aerosol optical properties

    DOE PAGES

    Willis, Megan D.; Healy, Robert M.; Riemer, Nicole; ...

    2016-04-14

    The climatic impacts of black carbon (BC) aerosol, an important absorber of solar radiation in the atmosphere, remain poorly constrained and are intimately related to its particle-scale physical and chemical properties. Using particle-resolved modelling informed by quantitative measurements from a soot-particle aerosol mass spectrometer, we confirm that the mixing state (the distribution of co-emitted aerosol amongst fresh BC-containing particles) at the time of emission significantly affects BC-aerosol optical properties even after a day of atmospheric processing. Both single particle and ensemble aerosol mass spectrometry observations indicate that BC near the point of emission co-exists with hydrocarbon-like organic aerosol (HOA) inmore » two distinct particle types: HOA-rich and BC-rich particles. The average mass fraction of black carbon in HOA-rich and BC-rich particle classes was  < 0.1 and 0.8, respectively. Notably, approximately 90 % of BC mass resides in BC-rich particles. This new measurement capability provides quantitative insight into the physical and chemical nature of BC-containing particles and is used to drive a particle-resolved aerosol box model. Lastly, significant differences in calculated single scattering albedo (an increase of 0.1) arise from accurate treatment of initial particle mixing state as compared to the assumption of uniform aerosol composition at the point of BC injection into the atmosphere.« less

  7. Characterization of aerosol composition and sources in the greater Atlanta area by aerosol mass spectrometry

    NASA Astrophysics Data System (ADS)

    Ng, N. L.; Xu, L.; Suresh, S.; Weber, R. J. J.; Baumann, K.; Edgerton, E. S.

    2014-12-01

    An important and uncertain aspect of biogenic secondary organic aerosol (SOA) formation is that it is often associated with anthropogenic pollution tracers. Prior studies in Atlanta suggested that 70-80% of the carbon in water-soluble organic carbon (WSOC) is modern, yet it is well-correlated with the anthropogenic CO. In this study, we deployed a High Resolution Time-of-Flight Aerosol Mass Spectrometer (HR-ToF-AMS) and an Aerosol Chemical Speciation Monitor (ACSM) at multiple sites in different seasons (May 2012-February 2013) to characterize the sources and chemical composition of aerosols in the greater Atlanta area. This area in the SE US is ideal to investigate anthropogenic-biogenic interactions due to high natural and anthropogenic emissions. These extensive field studies are part of the Southeastern Center for Air Pollution and Epidemiology study (SCAPE). The HR-ToF-AMS is deployed at four sites (~ 3 weeks each) in rotation: Jefferson Street (urban), Yorkville (rural), roadside site (near Highway 75/85), and Georgia Tech site (campus), with the urban and rural sites being part of the SEARCH network. We obtained seven HR-ToF-AMS datasets in total. During the entire measurement period, the ACSM is stationary at the GIT site and samples continuously. We perform positive matrix factorization (PMF) analysis on the HR-ToF-AMS and ACSM data to deconvolve the OA into different components. While the diurnal cycle of the total OA is flat as what have been previously observed, the OA factors resolved by PMF analysis show distinctively different diurnal trends. We find that the "more-oxidized oxygenated OA" (MO-OOA) constitutes a major fraction of OA at all sites. In summer, OA is dominated by SOA, e.g., isoprene-OA and OOA with different degrees of oxidation. In contrary, biomass burning OA is more prominent in winter data. By comparing HR-ToF-AMS and ACSM data during the same sampling periods, we find that the aerosol time series are highly correlated, indicating the

  8. High energy resolution five-crystal spectrometer for high quality fluorescence and absorption measurements on an x-ray absorption spectroscopy beamline

    SciTech Connect

    Llorens, Isabelle; Lahera, Eric; Delnet, William; Proux, Olivier; Dermigny, Quentin; Gelebart, Frederic; Morand, Marc; Shukla, Abhay; Bardou, Nathalie; Ulrich, Olivier; and others

    2012-06-15

    Fluorescence detection is classically achieved with a solid state detector (SSD) on x-ray absorption spectroscopy (XAS) beamlines. This kind of detection however presents some limitations related to the limited energy resolution and saturation. Crystal analyzer spectrometers (CAS) based on a Johann-type geometry have been developed to overcome these limitations. We have tested and installed such a system on the BM30B/CRG-FAME XAS beamline at the ESRF dedicated to the structural investigation of very dilute systems in environmental, material and biological sciences. The spectrometer has been designed to be a mobile device for easy integration in multi-purpose hard x-ray synchrotron beamlines or even with a laboratory x-ray source. The CAS allows to collect x-ray photons from a large solid angle with five spherically bent crystals. It will cover a large energy range allowing to probe fluorescence lines characteristic of all the elements from Ca (Z = 20) to U (Z = 92). It provides an energy resolution of 1-2 eV. XAS spectroscopy is the main application of this device even if other spectroscopic techniques (RIXS, XES, XRS, etc.) can be also achieved with it. The performances of the CAS are illustrated by two experiments that are difficult or impossible to perform with SSD and the complementarity of the CAS vs SSD detectors is discussed.

  9. Secondary Aerosol Formation in the planetary boundary layer observed by aerosol mass spectrometry on a Zeppelin NT

    NASA Astrophysics Data System (ADS)

    Rubach, Florian; Trimborn, Achim; Mentel, Thomas; Wahner, Andreas; Zeppelin Pegasos-Team 2012

    2014-05-01

    The airship Zeppelin NT is an airborne platform capable of flying at low speed throughout the entire planetary boundary layer (PBL). In combination with the high scientific payload of more than 1 ton, the Zeppelin is an ideal platform to study regional processes in the lowest layers of the atmosphere with high spatial resolution. Atmospheric aerosol as a medium long lived tracer substance is of particular interest due to its influence on the global radiation budget. Due its lifetime of up to several days secondaray aerosol at a certain location can result from local production or from transport processes. For aerosol measurements on a Zeppelin, a High-Resolution Time-of-Flight Aerosol Mass spectrometer (DeCarlo et al, 2006) was adapted to the requirements posed by an airborne platform. A weight reduction of over 20 % compared to the commercial instrument was achieved, while space occupation and footprint were each reduced by over 25 %. Within the PEGASOS project, the instrument was part of 10 measurement flight days over the course of seven weeks. Three flights were starting from Rotterdam, NL, seven flights were starting from Ozzano in the Po Valley, IT. Flight patterns included vertical profiles to study the dynamics of the PBL and cross sections through regions of interest to shed light on local production and transport processes. Analysis of data from transects between the Apennin and San Pietro Capofiume in terms of "residence time of air masses in the Po valley" indicates that aerosol nitrate has only local sources while aerosol sulfate is dominated by transport. The organic aerosol component has significant contributions of both processes. The local prodcution yields are commensurable with imultaneously observed precursor concentrations and oxidant levels. The PEGASOS project is funded by the European Commission under the Framework Programme 7 (FP7-ENV-2010-265148). DeCarlo, P.F. et al (2006), Anal. Chem., 78, 8281-8289.

  10. Implementing the CAS Standards: The Implementation of the CAS Standards in Student Affairs as a Comprehensive Assessment Approach

    ERIC Educational Resources Information Center

    Dorman, Jesse A.

    2012-01-01

    The increasing use of the CAS standards as a comprehensive assessment approach in divisions of student affairs necessitates a more in-depth understanding of how the CAS standards are being implemented in these settings. In response to increasing calls for improvement, accountability and professionalism in student affairs (Bresciani, 2006; Cooper…

  11. Variations in hygroscopic growth of sub- and super-micron sea spray aerosols during a phytoplankton bloom

    NASA Astrophysics Data System (ADS)

    Forestieri, S.; Jayarathne, T. S.; Stone, E. A.; Laskina, O.; Grassian, V. H.; Lee, C.; Sultana, C. M.; Moore, K.; Cornwell, G.; Novak, G.; Bertram, T. H.; Prather, K. A.; Cappa, C. D.

    2014-12-01

    Marine sea spray aerosols (SSA) make up an important portion of natural aerosols (prior to anthropogenic influence) and are therefore important in establishing the baseline for anthropogenic aerosol climate impacts. One way aerosols impact climate is by scattering solar radiation, and how much light is scattered depends upon the size of aerosols. Aerosols grow larger via water uptake and thus scatter more light at elevated relative humidities. This growth depends on composition. SSA can become enriched in organics during phytoplankton blooms, becoming less salty and therefore less hygroscopic. Aerosol hygroscopicity of SSA sampled during an in-lab phytoplankton bloom were measured during the CAICE-IMPACTS 2014 study. SSA were generated via breaking waves in an enclosed 33 m wave channel filled with natural seawater. Aerosol hygroscopicity was characterized by measuring light extinction at 532 nm of dry aerosols and of aerosols humidified to 85% relative humidity using a Cavity Ringdown Spectrometer. These optical growth factors (humidified extinction/dry extinction) were converted to physical growth factors using Mie Theory calculations and aerosol size distributions measured with a scanning electrical mobility spectrometer (SEMS) and an aerodynamic particle sizer (APS). Growth factors for super- and sub-micron SSA were quantified separately through the use of a PM2.5 cyclone or PM1 impactor. The observed SSA growth factors will be linked to SSA and source water chemical composition determined by both offline and online analysis of samples. The SSA bulk growth factors will also be compared with concurrent measurements of the efficiency with which SSA act as cloud condensation nuclei. Observed SSA growth factors will also be compared to offline hygroscopic growth measurements.

  12. Two-Column Aerosol Project: Aerosol Light Extinction Measurements Field Campaign Report

    SciTech Connect

    Dubey, Manvendra; Aiken, Allison; Berg, Larry K.; Freedman, Andrew; Gorkowski, Kyle

    2016-09-01

    We deployed Aerodyne Research Inc.’s first Cavity Attenuated Phase Shift extinction (CAPS PMex) monitor (built by Aerodyne) that measures light extinction by using a visible-light-emitting diode (LED) as a light source, a sample cell incorporating two high-reflectivity mirrors centered at the wavelength of the LED, and a vacuum photodiode detector in Cape Cod in 2012/13 for the U.S. Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) Climate Research Facility’s Two-Column Aerosol Project (TCAP). The efficacy of this instrument is based on the fact that aerosols are broadband scatterers and absorbers of light. The input LED is square-wave modulated and passed through the sample cell that distorts it due to exponential decay by aerosol light absorption and scattering; this is measured at the detector. The amount of phase shift of the light at the detector is used to determine the light extinction. This extinction measurement provides an absolute value, requiring no calibration. The goal was to compare the CAPS performance with direct measurements of absorption with ARM’s baseline photoacoustic soot spectrometer (PASS-3) and nephelometer instruments to evaluate its performance.

  13. Ion mobility spectrometer / mass spectrometer (IMS-MS).

    SciTech Connect

    Hunka Deborah Elaine; Austin, Daniel E.

    2005-07-01

    The use of Ion Mobility Spectrometry (IMS) in the Detection of Contraband Sandia researchers use ion mobility spectrometers for trace chemical detection and analysis in a variety of projects and applications. Products developed in recent years based on IMS-technology include explosives detection personnel portals, the Material Area Access (MAA) checkpoint of the future, an explosives detection vehicle portal, hand-held detection systems such as the Hound and Hound II (all 6400), micro-IMS sensors (1700), ordnance detection (2500), and Fourier Transform IMS technology (8700). The emphasis to date has been on explosives detection, but the detection of chemical agents has also been pursued (8100 and 6400). Combining Ion Mobility Spectrometry (IMS) with Mass Spectrometry (MS) is described. The IMS-MS combination overcomes several limitations present in simple IMS systems. Ion mobility alone is insufficient to identify an unknown chemical agent. Collision cross section, upon which mobility is based, is not sufficiently unique or predictable a priori to be able to make a confident peak assignment unless the compounds present are already identified. Molecular mass, on the other hand, is much more readily interpreted and related to compounds. For a given compound, the molecular mass can be determined using a pocket calculator (or in one's head) while a reasonable value of the cross-section might require hours of computation time. Thus a mass spectrum provides chemical specificity and identity not accessible in the mobility spectrum alone. In addition, several advanced mass spectrometric methods, such as tandem MS, have been extensively developed for the purpose of molecular identification. With an appropriate mass spectrometer connected to an ion mobility spectrometer, these advanced identification methods become available, providing greater characterization capability.

  14. Ion Mobility Spectrometer / Mass Spectrometer (IMS-MS).

    SciTech Connect

    Hunka, Deborah E; Austin, Daniel

    2005-10-01

    The use of Ion Mobility Spectrometry (IMS)in the Detection of Contraband Sandia researchers use ion mobility spectrometers for trace chemical detection and analysis in a variety of projects and applications. Products developed in recent years based on IMS-technology include explosives detection personnel portals, the Material Area Access (MAA) checkpoint of the future, an explosives detection vehicle portal, hand-held detection systems such as the Hound and Hound II (all 6400), micro-IMS sensors (1700), ordnance detection (2500), and Fourier Transform IMS technology (8700). The emphasis to date has been on explosives detection, but the detection of chemical agents has also been pursued (8100 and 6400).Combining Ion Mobility Spectrometry (IMS) with Mass Spectrometry (MS)The IMS-MS combination overcomes several limitations present in simple IMS systems. Ion mobility alone is insufficient to identify an unknown chemical agent. Collision cross section, upon which mobility is based, is not sufficiently unique or predictable a priori to be able to make a confident peak assignment unless the compounds present are already identified. Molecular mass, on the other hand, is much more readily interpreted and related to compounds. For a given compound, the molecular mass can be determined using a pocket calculator (or in one's head) while a reasonable value of the cross-section might require hours of computation time. Thus a mass spectrum provides chemical specificity and identity not accessible in the mobility spectrum alone. In addition, several advanced mass spectrometric methods, such as tandem MS, have been extensively developed for the purpose of molecular identification. With an appropriate mass spectrometer connected to an ion mobility spectrometer, these advanced identification methods become available, providing greater characterization capability.3 AcronymsIMSion mobility spectrometryMAAMaterial Access AreaMSmass spectrometryoaTOForthogonal acceleration time

  15. Fourier transform spectrometer for Greenhouse Gases Observing Satellite (GOSAT)

    NASA Astrophysics Data System (ADS)

    Hamazaki, Takashi; Kaneko, Yutaka; Kuze, Akihiko; Kondo, Kayoko

    2005-01-01

    Global warming has become a very serious issue for human beings. In 1997, the Kyoto Protocol was adopted at the Third Session of the Conference of the Parties to the United Nations Framework Convention on Climate Change (COP3), making it mandatory for developed nations to reduce carbon dioxide emissions by six (6) to eight (8) per cent of their total emissions in 1990, and to meet this goal sometime between 2008 and 2012. The Greenhouse gases Observing SATellite (GOSAT) is designed to monitor the global distribution of carbon dioxide (CO2) from the space. GOSAT is a joint project of Japan Aerospace Exploration Agency (JAXA), the Ministry of Environment (MOE), and the National Institute for Environmental Studies (NIES). JAXA is responsible for the satellite and instrument development, MOE is involved in the instrument development, and NIES is responsible for the satellite data retrieval. The satellite is scheduled to be launched in 2008. In order to detect the CO2 variation of boundary layers, both the technique to measure the column density and the retrieval algorithm to remove cloud and aerosol contamination are investigated. Main mission sensor of the GOSAT is a Fourier Transform Spectrometer with high optical throughput, spectral resolution and wide spectral coverage, and a cloud-aerosol detecting imager attached to the satellite. The paper presents the mission sensor system of the GOSAT together with the results of performance demonstration with proto-type instrument aboard an aircraft.

  16. Mobility Spectrometer Studies on Hydrazine and Ammonia Detection

    NASA Technical Reports Server (NTRS)

    Niu, William; Eiceman, Gary; Szumlas, Andrew; Lewis, John

    2011-01-01

    An airborne vapor analyzer for detecting sub- to low- parts-per-million (ppm) hydrazine in the presence of higher concentration levels of ammonia has been under development for the Orion program. The detector is based on ambient pressure ionization and ion mobility characterization. The detector encompasses: 1) a membrane inlet to exclude particulate and aerosols from the analyzer inlet; 2) a method to separate hydrazine from ammonia which would otherwise lead to loss of calibration and quantitative accuracy for the hydrazine determination; and 3) response and quantitative determinations for both hydrazine and ammonia. Laboratory studies were made to explore some of these features including mobility measurements mindful of power, size, and weight issues. The study recommended the use of a mobility spectrometer of traditional design with a reagent gas and equipped with an inlet transfer line of bonded phase fused silica tube. The inlet transfer line provided gas phase separation of neutrals of ammonia from hydrazine at 50 C simplifying significantly the ionization chemistry that underlies response in a mobility spectrometer. Performance of the analyzer was acceptable between ranges of 30 to 80 C for both the pre-fractionation column and the drift tube. An inlet comprised of a combined membrane with valve-less injector allowed high speed quantitative determination of ammonia and hydrazine without cross reactivity from common metabolites such as alcohols, esters, and aldehydes. Preliminary test results and some of the design features are discussed.

  17. Interference activity of a minimal Type I CRISPR–Cas system from Shewanella putrefaciens

    PubMed Central

    Dwarakanath, Srivatsa; Brenzinger, Susanne; Gleditzsch, Daniel; Plagens, André; Klingl, Andreas; Thormann, Kai; Randau, Lennart

    2015-01-01

    Type I CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats)–Cas (CRISPR-associated) systems exist in bacterial and archaeal organisms and provide immunity against foreign DNA. The Cas protein content of the DNA interference complexes (termed Cascade) varies between different CRISPR-Cas subtypes. A minimal variant of the Type I-F system was identified in proteobacterial species including Shewanella putrefaciens CN-32. This variant lacks a large subunit (Csy1), Csy2 and Csy3 and contains two unclassified cas genes. The genome of S. putrefaciens CN-32 contains only five Cas proteins (Cas1, Cas3, Cas6f, Cas1821 and Cas1822) and a single CRISPR array with 81 spacers. RNA-Seq analyses revealed the transcription of this array and the maturation of crRNAs (CRISPR RNAs). Interference assays based on plasmid conjugation demonstrated that this CRISPR-Cas system is active in vivo and that activity is dependent on the recognition of the dinucleotide GG PAM (Protospacer Adjacent Motif) sequence and crRNA abundance. The deletion of cas1821 and cas1822 reduced the cellular crRNA pool. Recombinant Cas1821 was shown to form helical filaments bound to RNA molecules, which suggests its role as the Cascade backbone protein. A Cascade complex was isolated which contained multiple Cas1821 copies, Cas1822, Cas6f and mature crRNAs. PMID:26350210

  18. Comparison of the TSI Model 8520 and Grimm Series 1.108 portable aerosol instruments used to monitor particulate matter in an iron foundry.

    PubMed

    Cheng, Yu-Hsiang

    2008-03-01

    This study uses two real-time dust monitors, the TSI Model 8520 DustTrak and Grimm Series 1.108 Aerosol Spectrometer, to determine PM(10) and PM(2.5) levels simultaneously in an iron foundry. The SA Model 241 Dichotomous Sampler was used as a reference gravimetric method for comparing the measurement results obtained by these direct-reading instruments. The response to PM levels from DustTrak is higher than that of the Aerosol Spectrometer. The DustTrak provides an overestimation PM levels, and PM levels measured by an Aerosol Spectrometer are lower than actual concentrations. Calibration factors of the DustTrak and Aerosol Spectrometer are 0.74 and 1.33, respectively, when used to measure particulate matter at an iron foundry. Based on measurement results, the DustTrak provides a lower overestimation of PM(10) levels than PM(2.5) levels; that is, the response of the DustTrak increases as particle size decreases. In addition, measurement results suggest that the Aerosol Spectrometer provides precise measurements of PM(10) and PM(2.5), and measurement accuracy compared with the reference gravimetric method can be improved through a calibration factor.

  19. Evolution of Asian aerosols during transpacific transport in INTEX-B

    SciTech Connect

    Dunlea, E. J.; DeCarlo, Peter; Aiken, Allison; Kimmel, Joel; Peltier, R. E.; Weber, R. J.; Tomlinson, Jason M.; Collins, Donald R.; Shinozuka, Yohei; McNaughton, C. S.; Howell, S. G.; Clarke, A. D.; Emmons, L.; Apel, Eric; Pfister, G. G.; van Donkelaar, A.; Martin, R. V.; Millet, D. B.; Heald, C. L.; Jimenez, J. L.

    2009-10-01

    Measurements of aerosol composition were made with an Aerodyne High Resolution Time-of-Flight Aerosol Mass Spectrometer (HR-ToF-AMS) on board the NSF/NCAR C-130 aircraft as part of the Intercontinental Chemical Transport Experiment Phase B 5 (INTEX-B) field campaign over the Eastern Pacific Ocean. The HR-ToF-AMS measurements of non-refractory submicron aerosol mass are shown to compare well with other aerosol instrumentation in the INTEX-B field study. Two case studies are described for pollution layers transported across the Pacific from the Asian continent, intercepted 3–4 days and 7–10 days downwind of Asia, respectively. Aerosol chemistry is shown to 10 be a robust tracer for air masses originating in Asia, specifically the presence of sulfate dominated aerosol is a distinguishing feature of Asian pollution layers that have been transported to the Eastern Pacific. We examine the time scales of processing for sulfate and organic aerosol in the atmosphere and show that our observations confirm a conceptual model for transpacific transport from Asia proposed by Brock et al. (2004). 15 Our observations of both sulfate and organic aerosol in aged Asian pollution layers are consistent with fast formation near the Asian continent, followed by washout during lofting and subsequent transformation during transport across the Pacific. Our observations are the first atmospheric measurements to indicate that although secondary organic aerosol (SOA) formation from pollution happens on the timescale of one day, 20 the oxidation of organic aerosol continues at longer timescales in the atmosphere. Comparisons with chemical transport models of data from the entire campaign reveal an under-prediction of SOA mass in the MOZART model, but much smaller discrepancies with the GEOS-Chem model than found in previous studies over the Western Pacific. No evidence is found to support a previous hypothesis for significant secondary 25 organic aerosol formation in the free troposphere.

  20. Representation and evaluation of aerosol mixing state in a climate model

    NASA Astrophysics Data System (ADS)

    Bauer, S. E.; Prather, K. A.; Ault, A. P.

    2011-12-01

    Aerosol particles in the atmosphere are composed out of multiple chemical species. The aerosol mixing state is an important aerosol property that will determine the interaction of aerosols with the climate system via radiative forcings and cloud activation. Through the introduction of aerosol microphysics into climate models, aerosol mixing state is by now taken into account to a certain extend in climate models, and evaluation of mixing state is the next challenge. Here we use data from the Aerosol Time of Flight Mass Spectrometer (ATOFMS) and compare the results to the GISS-modelE-MATRIX model, a global climate model including a detailed aerosol micro-physical scheme. We use data from various field campaigns probing, urban, rural and maritime air masses and compare those to climatological and nudged simulations for the years 2005 to 2009. ATOFMS provides information about the size distributions of several mixing state classes, including the chemical components of black and organic carbon, sulfates, dust and salts. MATRIX simulates 16 aerosol populations, which definitions are based on mixing state. We have grouped ATOFMS and MATRIX data into similar mixing state classes and compare the size resolved number concentrations against each other. As a first result we find that climatological simulations are rather difficult to evaluate with field data, and that nudged simulations give a much better agreement. However this is not just caused by the better fit of natural - meteorological driven - aerosol components, but also due to the interaction between meteorology and aerosol formation. The model seems to get the right amount of mixing state of black carbon material with sulfate and organic components, but seems to always overestimate the fraction of black carbon that is externally mixed. In order to understand this bias between model and the ATOFMS data, we will look into microphysical processes near emission sources and investigate the climate relevance of these sub

  1. The Regional Extent of Biogenic Aerosols in Borneo

    NASA Astrophysics Data System (ADS)

    Allan, J. D.; Robinson, N. H.; Bower, K. N.; Flynn, M.; Williams, P. I.; Dorsey, J. R.; Good, N.; Irwin, M.; Whitehead, J.; Gabey, A. M.; Muller, J.; Trembath, J.; Chen, Q.; Martin, S. T.; Gallagher, M.; McFiggans, G. B.; Coe, H.

    2008-12-01

    The processes that control the composition of aerosols are currently not well understood, as are their effects on regional climate and meteorology. This is particularly true when considering tropical regions; the enhanced plant activity and extensive forestation are responsible for large amounts of VOCs being released into the atmosphere, which are responsible for forming secondary aerosol matter. However, the aerosols in these regions are currently poorly characterised both in terms of their concentration, physiochemical properties and the spatial extent of their influence. During the summer of 2008, an extensive suite of instrumentation was deployed on a number of platforms as part of the Oxidant and Particle Photochemical Processes (OP3) and the Aerosol Coupling in the Earth System (ACES) projects. The principle surface site was the Bukit Atur Global Atmosphere Watch (GAW) site in the Danum Valley Conservation Area. This featured a variety of aerosol instrumentation, designed to characterise the aerosol properties in conjunction with gas phase and meteorological measurements. In addition, many more instruments were also deployed aboard the Facility for Airborne Atmospheric Measurement (FAAM) BAe-S 146 research aircraft. Some of these instruments (including the Aerodyne Aerosol Mass Spectrometer and Droplet Measurement Technologies Cloud Condensation Nuclei counter) were designed to duplicate the ground based measurements, so that the spatial extent of the aerosols could be assessed in addition to the detailed characterisation work. Typical flights included atmospheric profiles and flights within the boundary layer (BL) over the forest to map out the extent of the aerosols and precursors. The non refractory BL aerosols typically contained a mixture of organic matter and sulphate, the latter possibly of oceanic origin. This is in contrast to the free troposphere where consistently low concentrations were recorded. Of particular interest was studying the

  2. Pilomatricome: étude de 22 cas

    PubMed Central

    Nasreddine, Fatima Zahra; Hali, Fouzia; Chiheb, Soumiya

    2016-01-01

    Le pilomatricome est une tumeur cutanée fréquente et bénigne du follicule pileux chez l'enfant. C'est une tumeur annexielle souvent méconnue et confondue avec d'autres lésions cutanées. Les localisations habituelles sont la tête et le cou. Le but de ce travail est de rapporter une série de 22 cas comportant des formes inhabituelles colligées au service de dermatologie sur une période allant de Janvier 2006 jusqu'au Mai 2015. L’étude a concerné 16 femmes et 6 hommes. La moyenne d’âge était de 23,3 ans (4-80 ans). La localisation cervico faciale a été observée dans 12 cas, 2 patients avaient des localisations multiples, un garçon de 4ans avait une localisation au niveau fronto-temporal et une fillette de 14 ans avait une localisation au niveau du visage et de l'avant-bras, et un patient de 48 ans avait une localisation sous unguéale. L'aspect clinique était typique dans tous les cas avec des nodules sous cutanés de consistance pierreuse. Tous les patients ont bénéficié d'une exérèse des nodules sous anesthésie locale. L’étude histologique était en faveur d'un épithélioma momifié de Malherbe d'exérèse complète sans signes de malignité. Aucun patient n'a présenté de rechute. L'originalité de notre étude réside dans la présence de localisations exceptionnelles au niveau latéro-vertébral, des membres et sous-unguéale, l’âge de survenue inhabituel à 80 ans et la présence de localisations multiples signalées chez 2 enfants. PMID:27516819

  3. Measurement and Modeling Results on the Evolution of Aerosol Size Distributions in the Tropics

    NASA Astrophysics Data System (ADS)

    Bahreini, R.; Kazil, J.; Reeves, J. M.; Froyd, K. D.; Wilson, J. C.

    2012-12-01

    Aerosol particles in the upper troposphere-lower stratosphere (UTLS) affect local chemistry and radiation balance due to their role in heterogeneous reactions and contribution to light scattering. Tropical UTLS particles also act as a source of lower stratospheric aerosol populations in the mid-latitudes. Therefore, understanding the processes controlling evolution of the particles in the tropical UTLS is of great importance. We present measurements of aerosol size distributions (4-1000 nm) in the tropics during winter (Pre-AVE, 2004 and CRAVE, 2006) and summer (TC4, 2007), using NMASS (Nuclei Mode Aerosol Size Spectrometer) and FCAS (Focused Cavity Aerosol Spectrometer) instruments aboard the NASA WB-57 aircraft. At altitudes below the tropical tropopause layer (TTL), integrated number and volume distributions indicate a factor of 2-5 variability between 2004 and 2006, reflecting the influence of different air mass origins on the local aerosol population. However, above TTL, the distributions are unified, without a significant change between the two years. Furthermore, above the TTL, number fraction of nucleation mode particles decreases from up to 90% to <40% while total aerosol volume and the volume fraction of particles larger than 350 nm increase. We use an aerosol dynamic model (MAIA, Kazil et al. (2007), Weigel et al. (2011)), constrained by observations to account for the horizontal air mass mixing from mid-latitudes, to simulate aerosol evolution in the tropical UTLS. We will discuss the results of MAIA's sensitivity runs along with the available aerosol composition information to gain insight into the processes controlling the increase in aerosol volume above the TTL. We will also use 2007 observations and MAIA's model results to compare winter-summer aerosol growth processes in the tropical UTLS. Kazil, J., et al., Is aerosol formation in cirrus clouds possible?, Atmos. Chem. Phys., 7, 1407-1413, doi:10.5194/acp-7-1407-2007, 2007. Weigel et al., In situ

  4. Overview of the Cumulus Humilis Aerosol Processing Study.

    SciTech Connect

    Berg, L. K.; Berkowitz, C. M.; Ogren, J. A.; Hostetler, C. A.; Ferrare, R. A.; Dubey, M.; Andrews, E.; Coulter, R. L.; Hair, J. W.; Hubbe, J. M.Lee, Y. N.; Mazzoleni, C; Olfert, J; Springston, SR; Environmental Science Division; PNNL; NOAA Earth System Research Lab.; NASA Langley Research Center; LANL; BNL; Univ.of Alberta; Univ. of Colorado

    2009-11-01

    convergence pattern caused by the city. Recently, the New England Air Quality Study (NEAQS), and the 2004 International Consortium for Atmospheric Research on Transport and Transformation, which were conducted during the summer of 2004, examined the transport of pollutants and aerosols eastward from New England over the Atlantic Ocean. The Texas Air Quality Study/Gulf of Mexico Atmospheric Composition and Climate Study (TexAQS/GoMACCS) also looked at relationships between clouds and aerosols in polluted conditions around Houston, Texas. In contrast to these recent studies near large or very dirty cities, CHAPS was conducted near a moderately sized city that is representative of a large number of cities around the United States. CHAPS was also one of the first times that a Aerodyne aerosol mass spectrometer was used in conjunction with a counterflow virtual impactor (CVI) inlet on an aircraft. The AMS provides information on the nonrefractory (i.e., materials that are chemically and physically unstable at high temperatures) composition of aerosols, while the CVI uses a counterflow relative to the main incoming airstream to exclude small droplets and nonactivated particles from the inlet, allowing only larger cloud droplets to enter the inlet. The combination of the CVI and AMS allow the examination of the chemical composition of the dried aerosol kernel from the cloud droplets. A key objective of the U.S. Department of Energy's (DOE)'s Atmospheric Sciences Program (ASP) is to improve the understanding of aerosol radiative effects on climate. This objective encompasses not only clear sky observations but also studies relating the effects of both aerosols on clouds and clouds on aerosols - in particular, how clouds affect the chemical and optical properties of aerosols. The latter was the science driver in the design of CHAPS. The measurement strategy for CHAPS was intended to provide measurements relevant to four questions associated with the aerosol radiative forcing issues of

  5. Crystal Structure of Streptococcus pyogenes Cas1 and Its Interaction with Csn2 in the Type II CRISPR-Cas System.

    PubMed

    Ka, Donghyun; Lee, Hasup; Jung, Yi-Deun; Kim, Kyunggon; Seok, Chaok; Suh, Nayoung; Bae, Euiyoung

    2016-01-05

    CRISPRs and Cas proteins constitute an RNA-guided microbial immune system against invading nucleic acids. Cas1 is a universal Cas protein found in all three types of CRISPR-Cas systems, and its role is implicated in new spacer acquisition during CRISPR-mediated adaptive immunity. Here, we report the crystal structure of Streptococcus pyogenes Cas1 (SpCas1) in a type II CRISPR-Cas system and characterize its interaction with S. pyogenes Csn2 (SpCsn2). The SpCas1 structure reveals a unique conformational state distinct from type I Cas1 structures, resulting in a more extensive dimerization interface, a more globular overall structure, and a disruption of potential metal-binding sites for catalysis. We demonstrate that SpCas1 directly interacts with SpCsn2, and identify the binding interface and key residues for Cas complex formation. These results provide structural information for a type II Cas1 protein, and lay a foundation for studying multiprotein Cas complexes functioning in type II CRISPR-Cas systems.

  6. Results of the first air ion spectrometer calibration and intercomparison workshop

    NASA Astrophysics Data System (ADS)

    Asmi, E.; Sipilä, M.; Manninen, H. E.; Vanhanen, J.; Lehtipalo, K.; Gagné, S.; Neitola, K.; Mirme, A.; Mirme, S.; Tamm, E.; Uin, J.; Komsaare, K.; Attoui, M.; Kulmala, M.

    2008-09-01

    The air ion spectrometer (AIS) measures mobility and size distributions of atmospheric ions. The neutral air ion spectrometer (NAIS) can additionally measure neutral particles. The number of the (N)AIS instruments in the world is only 11. Nevertheless, they are already widely used in atmospheric ion studies, particularly related to the initial steps of new particle formation. There is no standard method applicable for calibrating the ion spectrometers in the sub-3 nm ion range. However, recent development of high resolution DMAs has enabled the size separation of small ions with good mobility resolution. For the first time, the ion spectrometers were intercompared and calibrated in a workshop, held in January February 2008 in Helsinki, Finland. The overall goal was to experimentally determine the (N)AIS transfer functions. Monomobile mobility standards, 241-Am charger ions and silver particles were generated and used as calibration aerosols. High resolution DMAs were used to size-separate the smaller (1 10 nm) ions, while at bigger diameters (4 40 nm) the size was selected with a HAUKE-type DMA. Differences between the (N)AISs were small. Positive ion mobilities were detected by (N)AISs with better accuracy than negative, nonetheless, both were somewhat overestimated. The completely monomobile mobility standards were measured with the best accuracy. The (N)AIS concentrations were compared with an aerosol electrometer (AE) and a condensation particle counter (CPC). At sizes below 1.5 nm (positive) and 3 nm (negative) the ion spectrometers detected higher concentrations while at bigger sizes they showed similar concentrations as the reference instruments. The total particle concentrations measured by NAISs were ±50% of the reference CPC concentration at 4 40 nm sizes. The lowest cut-off size of the NAIS in neutral particle measurements was determined to be between 1.5 and 3 nm, depending on the measurement conditions and the polarity.

  7. The Pickup Ion Composition Spectrometer

    NASA Astrophysics Data System (ADS)

    Gilbert, Jason A.; Zurbuchen, Thomas H.; Battel, Steven

    2016-06-01

    Observations of newly ionized atoms that are picked up by the magnetic field in the expanding solar wind contain crucial information about the gas or dust compositions of their origins. The pickup ions (PUIs) are collected by plasma mass spectrometers and analyzed for their density, composition, and velocity distribution. In addition to measurements of PUIs from planetary sources, in situ measurements of interstellar gas have been made possible by spectrometers capable of differentiating between heavy ions of solar and interstellar origin. While important research has been done on these often singly charged ions, the instruments that have detected many of them were designed for the energy range and ionic charge states of the solar wind and energized particle populations, and not for pickup ions. An instrument optimized for the complete energy and time-of-flight characterization of pickup ions will unlock a wealth of data on these hitherto unobserved or unresolved PUI species. The Pickup Ion Composition Spectrometer (PICSpec) is one such instrument and can enable the next generation of pickup ion and isotopic mass composition measurements. By combining a large-gap time-of-flight-energy sensor with a -100 kV high-voltage power supply for ion acceleration, PUIs will not only be above the detection threshold of traditional solid-state energy detectors but also be resolved sufficiently in time of flight that isotopic composition can be determined. This technology will lead to a new generation of space composition instruments, optimized for measurements of both heliospheric and planetary pickup ions.

  8. Atmospheric Chemistry: Nature's plasticized aerosols

    NASA Astrophysics Data System (ADS)

    Ziemann, Paul J.

    2016-01-01

    The structure of atmospheric aerosol particles affects their reactivity and growth rates. Measurements of aerosol properties over the Amazon rainforest indicate that organic particles above tropical rainforests are simple liquid drops.

  9. Palaeoclimate: Aerosols shift lake ecosystem

    NASA Astrophysics Data System (ADS)

    Dowsett, Harry J.

    2017-02-01

    Anthropogenic aerosols over the Chinese Loess Plateau have diminished monsoon precipitation and concomitant soil erosion that plagues the region. Now, a reconstruction documents the differences between historical warming events and the present, highlighting the paradoxical implications of decreasing atmospheric aerosols.

  10. Generation of aerosolized drugs.

    PubMed

    Wolff, R K; Niven, R W

    1994-01-01

    The expanding use of inhalation therapy has placed demands on current aerosol generation systems that are difficult to meet with current inhalers. The desire to deliver novel drug entities such as proteins and peptides, as well as complex formulations including liposomes and microspheres, requires delivery systems of improved efficiency that will target the lung in a reproducible manner. These efforts have also been spurred by the phase out of chlorofluorocarbons (CFCs) and this has included a directed search for alternative propellants. Consequently, a variety of new aerosol devices and methods of generating aerosols are being studied. This includes the use of freon replacement propellants, dry powder generation systems, aqueous unit spray systems and microprocessor controlled technologies. Each approach has advantages and disadvantages depending upon each principle of action and set of design variables. In addition, specific drugs may be better suited for one type of inhaler device vs. another. The extent to which aerosol generation systems achieve their goals is discussed together with a summary of selected papers presented at the recent International Congress of Aerosols in Medicine.

  11. Aerosol chemistry in GLOBE

    NASA Technical Reports Server (NTRS)

    Clarke, Antony D.; Rothermel, Jeffry; Jarzembski, Maurice A.

    1993-01-01

    This task addresses the measurement and understanding of the physical and chemical properties of aerosol in remote regions that are responsible for aerosol backscatter at infrared wavelengths. Because it is representative of other clean areas, the remote Pacific is of extreme interest. Emphasis is on the determination size dependent aerosol properties that are required for modeling backscatter at various wavelengths and upon those features that may be used to help understand the nature, origin, cycling and climatology of these aerosols in the remote troposphere. Empirical relationships will be established between lidar measurements and backscatter derived from the aerosol microphysics as required by the NASA Doppler Lidar Program. This will include the analysis of results from the NASA GLOBE Survey Mission Flight Program. Additional instrument development and deployment will be carried out in order to extend and refine this data base. Identified activities include participation in groundbased and airborne experiments. Progress to date includes participation in, analysis of, and publication of results from Mauna Loa Backscatter Intercomparison Experiment (MABIE) and Global Backscatter Experiment (GLOBE).

  12. Real-Time Detection Method And System For Identifying Individual Aerosol Particles

    DOEpatents

    Gard, Eric Evan; Fergenson, David Philip

    2005-10-25

    A method and system of identifying individual aerosol particles in real time. Sample aerosol particles are compared against and identified with substantially matching known particle types by producing positive and negative test spectra of an individual aerosol particle using a bipolar single particle mass spectrometer. Each test spectrum is compared to spectra of the same respective polarity in a database of predetermined positive and negative spectra for known particle types and a set of substantially matching spectra is obtained. Finally the identity of the individual aerosol particle is determined from the set of substantially matching spectra by determining a best matching one of the known particle types having both a substantially matching positive spectrum and a substantially matching negative spectrum associated with the best matching known particle type.

  13. The spectroscopic search for the trace aerosols in the planetary atmospheres - the results of numerical simulations

    NASA Astrophysics Data System (ADS)

    Blecka, Maria I.

    2010-05-01

    The passive remote spectrometric methods are important in examinations the atmospheres of planets. The radiance spectra inform us about values of thermodynamical parameters and composition of the atmospheres and surfaces. The spectral technology can be useful in detection of the trace aerosols like biological substances (if present) in the environments of the planets. We discuss here some of the aspects related to the spectroscopic search for the aerosols and dust in planetary atmospheres. Possibility of detection and identifications of biological aerosols with a passive InfraRed spectrometer in an open-air environment is discussed. We present numerically simulated, based on radiative transfer theory, spectroscopic observations of the Earth atmosphere. Laboratory measurements of transmittance of various kinds of aerosols, pollens and bacterias were used in modeling.

  14. Investigation of atmospheric aerosols and gases at an East China Station. Technical memo

    SciTech Connect

    Parungo, F.; Nagamoto, C.; Kopcewicz, B.; Li, X.; Yang, D.

    1993-04-01

    From August to October of 1991, when the West Pacific Exploratory Mission (PEM-west) airborne expedition was conducted, ground-level measurements of gases and aerosols were carried out at Lin-an station near the east coast of China. Meteorological parameters such as temperature, pressure, humidity, solar radiation, wind direction, and wind speed were recorded continuously. Concentrations of SO[sub 2], NO[sub 2], O[sub 3], and black carbon were monitored in situ intermittently. Aerosol samples were collected and later analyzed in laboratories. A transmission electron microscope was used to analyze particle concentration, morphology, and size distribution. Elemental compositions of aerosol samples, collected on filters, were determined with an neutron activation analyzer and with a proton induced x-ray energy spectrometer. The water soluble portions of the aerosols were analyzed by ion chromatography.

  15. Automated mass spectrometer grows up

    SciTech Connect

    McInteer, B.B.; Montoya, J.G.; Stark, E.E.

    1984-01-01

    In 1980 we reported the development of an automated mass spectrometer for large scale batches of samples enriched in nitrogen-15 as ammonium salts. Since that time significant technical progress has been made in the instrument. Perhaps more significantly, administrative and institutional changes have permitted the entire effort to be transferred to the private sector from its original base at the Los Alamos National Laboratory. This has ensured the continuance of a needed service to the international scientific community as revealed by a development project at a national laboratory, and is an excellent example of beneficial technology transfer to private industry.

  16. Alpha-particle spectrometer experiment

    NASA Technical Reports Server (NTRS)

    Gorenstein, P.; Bjorkholm, P.

    1972-01-01

    Mapping the radon emanation of the moon was studied to find potential areas of high activity by detection of radon isotopes and their daughter products. It was felt that based on observation of regions overflown by Apollo spacecraft and within the field of view of the alpha-particle spectrometer, a radon map could be constructed, identifying and locating lunar areas of outgassing. The basic theory of radon migration from natural concentrations of uranium and thorium is discussed in terms of radon decay and the production of alpha particles. The preliminary analysis of the results indicates no significant alpha emission.

  17. Portable neutron spectrometer and dosimeter

    DOEpatents

    Waechter, D.A.; Erkkila, B.H.; Vasilik, D.G.

    The disclosure relates to a battery operated neutron spectrometer/dosimeter utilizing a microprocessor, a built-in tissue equivalent LET neutron detector, and a 128-channel pulse height analyzer with integral liquid crystal display. The apparatus calculates doses and dose rates from neutrons incident on the detector and displays a spectrum of rad or rem as a function of keV per micron of equivalent tissue and also calculates and displays accumulated dose in millirads and millirem as well as neutron dose rates in millirads per hour and millirem per hour.

  18. Portable neutron spectrometer and dosimeter

    DOEpatents

    Waechter, David A.; Erkkila, Bruce H.; Vasilik, Dennis G.

    1985-01-01

    The disclosure relates to a battery operated neutron spectrometer/dosimeter utilizing a microprocessor, a built-in tissue equivalent LET neutron detector, and a 128-channel pulse height analyzer with integral liquid crystal display. The apparatus calculates doses and dose rates from neutrons incident on the detector and displays a spectrum of rad or rem as a function of keV per micron of equivalent tissue and also calculates and displays accumulated dose in millirads and millirem as well as neutron dose rates in millirads per hour and millirem per hour.

  19. Wide-range CCD spectrometer

    NASA Astrophysics Data System (ADS)

    Sokolova, Elena A.; Reyes Cortes, Santiago D.

    1996-08-01

    The utilization of wide range spectrometers is a very important feature for the design of optical diagnostics. This paper describes an innovative approach, based on charged coupled device, which allows to analyze different spectral intervals with the same diffraction grating. The spectral interval is varied by changing the position of the entrance slit when the grating is stationary. The optical system can also include a spherical mirror. In this case the geometric position of the mirror is calculated aiming at compensating the first order astigmatism and the meridional coma of the grating. This device is planned to be used in Thomson scattering diagnostic of the TOKAMAK of Instituto Superior Tecnico, Lisbon (ISTTOK).

  20. Modular multichannel surface plasmon spectrometer

    NASA Astrophysics Data System (ADS)

    Neuert, G.; Kufer, S.; Benoit, M.; Gaub, H. E.

    2005-05-01

    We have developed a modular multichannel surface plasmon resonance (SPR) spectrometer on the basis of a commercially available hybrid sensor chip. Due to its modularity this inexpensive and easy to use setup can readily be adapted to different experimental environments. High temperature stability is achieved through efficient thermal coupling of individual SPR units. With standard systems the performance of the multichannel instrument was evaluated. The absorption kinetics of a cysteamine monolayer, as well as the concentration dependence of the specific receptor-ligand interaction between biotin and streptavidin was measured.

  1. Triple axis and spins spectrometers

    SciTech Connect

    Trevino, S.F.

    1993-01-01

    In the paper are described the triple axis and spin polarized inelastic neutron scattering (SPINS) spectrometers which are installed at the NIST Cold Neutron Research Facility (CNRF). The general principle of operation of these two instruments is described in sufficient detail to allow the reader to make an informed decision as to their usefulness for his needs. However, it is the intention of the staff at the CNRF to provide the expert resources for their efficient use in any given situation. Thus, the work is not intended as a user manual but rather as a guide into the range of applicability of the two instruments.

  2. CRISPR/Cas9 Based Genome Editing of Penicillium chrysogenum.

    PubMed

    Pohl, C; Kiel, J A K W; Driessen, A J M; Bovenberg, R A L; Nygård, Y

    2016-07-15

    CRISPR/Cas9 based systems have emerged as versatile platforms for precision genome editing in a wide range of organisms. Here we have developed powerful CRISPR/Cas9 tools for marker-based and marker-free genome modifications in Penicillium chrysogenum, a model filamentous fungus and industrially relevant cell factory. The developed CRISPR/Cas9 toolbox is highly flexible and allows editing of new targets with minimal cloning efforts. The Cas9 protein and the sgRNA can be either delivered during transformation, as preassembled CRISPR-Cas9 ribonucleoproteins (RNPs) or expressed from an AMA1 based plasmid within the cell. The direct delivery of the Cas9 protein with in vitro synthesized sgRNA to the cells allows for a transient method for genome engineering that may rapidly be applicable for other filamentous fungi. The expression of Cas9 from an AMA1 based vector was shown to be highly efficient for marker-free gene deletions.

  3. Nucleosome breathing and remodeling constrain CRISPR-Cas9 function

    PubMed Central

    Isaac, R Stefan; Jiang, Fuguo; Doudna, Jennifer A; Lim, Wendell A; Narlikar, Geeta J; Almeida, Ricardo

    2016-01-01

    The CRISPR-Cas9 bacterial surveillance system has become a versatile tool for genome editing and gene regulation in eukaryotic cells, yet how CRISPR-Cas9 contends with the barriers presented by eukaryotic chromatin is poorly understood. Here we investigate how the smallest unit of chromatin, a nucleosome, constrains the activity of the CRISPR-Cas9 system. We find that nucleosomes assembled on native DNA sequences are permissive to Cas9 action. However, the accessibility of nucleosomal DNA to Cas9 is variable over several orders of magnitude depending on dynamic properties of the DNA sequence and the distance of the PAM site from the nucleosome dyad. We further find that chromatin remodeling enzymes stimulate Cas9 activity on nucleosomal templates. Our findings imply that the spontaneous breathing of nucleosomal DNA together with the action of chromatin remodelers allow Cas9 to effectively act on chromatin in vivo. DOI: http://dx.doi.org/10.7554/eLife.13450.001 PMID:27130520

  4. HPCCP/CAS Workshop Proceedings 1998

    NASA Technical Reports Server (NTRS)

    Schulbach, Catherine; Mata, Ellen (Editor); Schulbach, Catherine (Editor)

    1999-01-01

    This publication is a collection of extended abstracts of presentations given at the HPCCP/CAS (High Performance Computing and Communications Program/Computational Aerosciences Project) Workshop held on August 24-26, 1998, at NASA Ames Research Center, Moffett Field, California. The objective of the Workshop was to bring together the aerospace high performance computing community, consisting of airframe and propulsion companies, independent software vendors, university researchers, and government scientists and engineers. The Workshop was sponsored by the HPCCP Office at NASA Ames Research Center. The Workshop consisted of over 40 presentations, including an overview of NASA's High Performance Computing and Communications Program and the Computational Aerosciences Project; ten sessions of papers representative of the high performance computing research conducted within the Program by the aerospace industry, academia, NASA, and other government laboratories; two panel sessions; and a special presentation by Mr. James Bailey.

  5. Adaptation in CRISPR-Cas Systems.

    PubMed

    Sternberg, Samuel H; Richter, Hagen; Charpentier, Emmanuelle; Qimron, Udi

    2016-03-17

    Clustered regularly interspaced short palindromic repeats (CRISPR) and CRISPR-associated (Cas) proteins constitute an adaptive immune system in prokaryotes. The system preserves memories of prior infections by integrating short segments of foreign DNA, termed spacers, into the CRISPR array in a process termed adaptation. During the past 3 years, significant progress has been made on the genetic requirements and molecular mechanisms of adaptation. Here we review these recent advances, with a focus on the experimental approaches that have been developed, the insights they generated, and a proposed mechanism for self- versus non-self-discrimination during the process of spacer selection. We further describe the regulation of adaptation and the protein players involved in this fascinating process that allows bacteria and archaea to harbor adaptive immunity.

  6. Tumeur de Frantz: deux nouveaux cas

    PubMed Central

    Bellarbi, Salma; Sina, Mohamed; Jahid, Ahmed; Zouaidia, Fouad; Bernoussi, Zakia; Mahassini, Najat

    2013-01-01

    A travers cet article, nous détaillons les caractéristiques clinico-pathologiques et discutons l'histogenèse de la tumeur de Frantz. Deux patients opérés pour tumeur de Frantz. Ils ont eu un traitement chirurgical seul. L'étude morphologique était couplée à un examen immuno-histochimique (IHC) utilisant les anticorps anti CD10, anti- vimentine, anti-énolase neuronale spécifique (NSE), anti-synaptophysine, anti-chromogranine A et anti-cytokératine. Un immuno-marquage à l'anti-oestrogène et l'anti-progestérone a été réalisé dans un cas. Il s'agissait d'une femme âgée de 45ans et d'un garçon de 12 ans. Les aspects échographiques et scannographiques étaient non spécifiques. Une exérèse chirurgicale complète a été réalisée dans les deux cas. L'analyse histologique évoquait une tumeur de Frantz. Le diagnostic a été retenu après étude immuno-histohimique. L'évolution était favorable sans récidive avec respectivement un recul de 18 et 16 mois. La tumeur de Frantz est une entité rare. Son diagnostic repose sur l'examen anatomopathologique complété par l'étude immuno-histochimique. Son pronostic est excellent après résection chirurgicale. PMID:23503717

  7. Environmental temperature effect on the far-infrared absorption features of aromatic-based Titan's aerosol analogs

    NASA Astrophysics Data System (ADS)

    Gautier, Thomas; Trainer, Melissa G.; Loeffler, Mark J.; Sebree, Joshua A.; Anderson, Carrie M.

    2017-01-01

    Benzene detection has been reported in Titan's atmosphere both in the stratosphere at ppb levels by remote sensing (Coustenis et al., 2007; Vinatier et al., 2007) and in the thermosphere at ppm levels by the Cassini's Ion and Neutral Mass Spectrometer (Waite et al., 2007). This detection supports the idea that aromatic and heteroaromatic reaction pathways may play an important role in Titan's atmospheric chemistry, especially in the formation of aerosols. Indeed, aromatic molecules are easily dissociated by ultraviolet radiation and can therefore contribute significantly to aerosol formation. It has been shown recently that aerosol analogs produced from a gas mixture containing a low concentration of aromatic and/or heteroaromatic molecules (benzene, naphthalene, pyridine, quinoline and isoquinoline) have spectral signatures below 500 cm-1, a first step towards reproducing the aerosol spectral features observed by Cassini's Composite InfraRed Spectrometer (CIRS) in the far infrared (Anderson and Samuelson 2011, and references therein). In this work we investigate the influence of environmental temperature on the absorption spectra of such aerosol samples, simulating the temperature range to which aerosols, once formed, are exposed during their transport through Titan's stratosphere. Our results show that environmental temperature does not have any major effect on the spectral shape of these aerosol analogs in the far-infrared, which is consistent with the CIRS observations.

  8. CRISPR-Cas9-Mediated Genome Editing in Leishmania donovani

    PubMed Central

    Zhang, Wen-Wei

    2015-01-01

    ABSTRACT The prokaryotic CRISPR (clustered regularly interspaced short palindromic repeat)-Cas9, an RNA-guided endonuclease, has been shown to mediate efficient genome editing in a wide variety of organisms. In the present study, the CRISPR-Cas9 system has been adapted to Leishmania donovani, a protozoan parasite that causes fatal human visceral leishmaniasis. We introduced the Cas9 nuclease into L. donovani and generated guide RNA (gRNA) expression vectors by using the L. donovani rRNA promoter and the hepatitis delta virus (HDV) ribozyme. It is demonstrated within that L. donovani mainly used homology-directed repair (HDR) and microhomology-mediated end joining (MMEJ) to repair the Cas9 nuclease-created double-strand DNA break (DSB). The nonhomologous end-joining (NHEJ) pathway appears to be absent in L. donovani. With this CRISPR-Cas9 system, it was possible to generate knockouts without selection by insertion of an oligonucleotide donor with stop codons and 25-nucleotide homology arms into the Cas9 cleavage site. Likewise, we disrupted and precisely tagged endogenous genes by inserting a bleomycin drug selection marker and GFP gene into the Cas9 cleavage site. With the use of Hammerhead and HDV ribozymes, a double-gRNA expression vector that further improved gene-targeting efficiency was developed, and it was used to make precise deletion of the 3-kb miltefosine transporter gene (LdMT). In addition, this study identified a novel single point mutation caused by CRISPR-Cas9 in LdMT (M381T) that led to miltefosine resistance, a concern for the only available oral antileishmanial drug. Together, these results demonstrate that the CRISPR-Cas9 system represents an effective genome engineering tool for L. donovani. PMID:26199327

  9. Characterization and evolution of Salmonella CRISPR-Cas systems.

    PubMed

    Shariat, Nikki; Timme, Ruth E; Pettengill, James B; Barrangou, Rodolphe; Dudley, Edward G

    2015-02-01

    Prokaryotic CRISPR-Cas (clustered regularly interspaced short palindromic repeats and CRISPR-associated genes) systems provide adaptive immunity from invasive genetic elements and encompass three essential features: (i) cas genes, (ii) a CRISPR array composed of spacers and direct repeats and (iii) an AT-rich leader sequence upstream of the array. We performed in-depth sequence analysis of the CRISPR-Cas systems in >600 Salmonella, representing four clinically prevalent serovars. Each CRISPR-Cas feature is extremely conserved in the Salmonella, and the CRISPR1 locus is more highly conserved than CRISPR2. Array composition is serovar-specific, although no convincing evidence of recent spacer acquisition against exogenous nucleic acids exists. Only 12% of spacers match phage and plasmid sequences and self-targeting spacers are associated with direct repeat variants. High nucleotide identity (>99.9%) exists across the cas operon among isolates of a single serovar and in some cases this conservation extends across divergent serovars. These observations reflect historical CRISPR-Cas immune activity, showing that this locus has ceased undergoing adaptive events. Intriguingly, the high level of conservation across divergent serovars shows that the genetic integrity of these inactive loci is maintained over time, contrasting with the canonical view that inactive CRISPR loci degenerate over time. This thorough characterization of Salmonella CRISPR-Cas systems presents new insights into Salmonella CRISPR evolution, particularly with respect to cas gene conservation, leader sequences, organization of direct repeats and protospacer matches. Collectively, our data suggest that Salmonella CRISPR-Cas systems are no longer immunogenic; rather, their impressive conservation indicates they may have an alternative function in Salmonella.

  10. Characterization and evolution of Salmonella CRISPR-Cas systems.

    PubMed

    Shariat, Nikki; Timme, Ruth E; Pettengill, James B; Barrangou, Rodolphe; Dudley, Edward G

    2015-02-01

    Prokaryotic CRISPR-Cas (clustered regularly interspaced short palindromic repeats and CRISPR-associated genes) systems provide adaptive immunity from invasive genetic elements and encompass three essential features: (i) cas genes, (ii) a CRISPR array composed of spacers and direct repeats and (iii) an AT-rich leader sequence upstream of the array. We performed in-depth sequence analysis of the CRISPR-Cas systems in >600 Salmonella, representing four clinically prevalent serovars. Each CRISPR-Cas feature is extremely conserved in the Salmonella, and the CRISPR1 locus is more highly conserved than CRISPR2. Array composition is serovar-specific, although no convincing evidence of recent spacer acquisition against exogenous nucleic acids exists. Only 12 % of spacers match phage and plasmid sequences and self-targeting spacers are associated with direct repeat variants. High nucleotide identity (>99.9 %) exists across the cas operon among isolates of a single serovar and in some cases this conservation extends across divergent serovars. These observations reflect historical CRISPR-Cas immune activity, showing that this locus has ceased undergoing adaptive events. Intriguingly, the high level of conservation across divergent serovars shows that the genetic integrity of these inactive loci is maintained over time, contrasting with the canonical view that inactive CRISPR loci degenerate over time. This thorough characterization of Salmonella CRISPR-Cas systems presents new insights into Salmonella CRISPR evolution, particularly with respect to cas gene conservation, leader sequences, organization of direct repeats and protospacer matches. Collectively, our data suggest that Salmonella CRISPR-Cas systems are no longer immunogenic; rather, their impressive conservation indicates they may have an alternative function in Salmonella.

  11. 205 PRODUCTION OF Cas9-EXPRESSING CATTLE USING DNA TRANSPOSON.

    PubMed

    Hahn, S-E; Yum, S-Y; Lee, S-J; Lee, C-I; Kim, H-S; Kim, H-J; Choi, W-J; Lee, J-H; Jang, G

    2016-01-01

    A genome-editing technology, CRISPR/Cas9 system is proved to be a powerful tool for knockout and knock-in in various species. When 2 components [Cas9 and single guide (sg) RNA] are delivered into cells or embryos, the events of gene editing occur. Because Cas9 is essential for every gene editing based on the CRISPR/Cas9 system, some studies reported that efficiency of gene editing would be increased as Cas9 was integrated into cells or animals. Accordingly, if the Cas9-expressing cattle is born, it would be broadly used for gene editing in cattle. For this study, the Cas9 and RFP genes were cloned into the PiggyBac transposon system. PiggyBac-Cas9-RFP and transposase were microinjected into 1436 IVF embryos and 241 blastocysts were formed. Blastocysts with RFP expression accounted for 14.1% of total formed blastocysts. Five blastocysts were selected and transferred into 5 recipient cow (1 embryo per recipient). After gestation periods, 4 transgenic cattle were delivered without any veterinary assistance. From transgenic cattle, ear skin tissue was collected for primary culture. On those primary cells, sgRNA in DNA form for various genes such as PRNP, RB1, and BLG were transfected with 2μg of sgRNA per 5×10(5) cells using electroporation. As expected, every group of each sgRNA delivered was confirmed to be mutated by T7E1 assay. The data demonstrated that, for the first time, transgenic cattle with Cas9 expression were born, grown up to date (age=5 months) and will be a valuable resource for genome editing in cattle.

  12. Programmable RNA recognition and cleavage by CRISPR/Cas9.

    PubMed

    O'Connell, Mitchell R; Oakes, Benjamin L; Sternberg, Samuel H; East-Seletsky, Alexandra; Kaplan, Matias; Doudna, Jennifer A

    2014-12-11

    The CRISPR-associated protein Cas9 is an RNA-guided DNA endonuclease that uses RNA-DNA complementarity to identify target sites for sequence-specific double-stranded DNA (dsDNA) cleavage. In its native context, Cas9 acts on DNA substrates exclusively because both binding and catalysis require recognition of a short DNA sequence, known as the protospacer adjacent motif (PAM), next to and on the strand opposite the twenty-nucleotide target site in dsDNA. Cas9 has proven to be a versatile tool for genome engineering and gene regulation in a large range of prokaryotic and eukaryotic cell types, and in whole organisms, but it has been thought to be incapable of targeting RNA. Here we show that Cas9 binds with high affinity to single-stranded RNA (ssRNA) targets matching the Cas9-associated guide RNA sequence when the PAM is presented in trans as a separate DNA oligonucleotide. Furthermore, PAM-presenting oligonucleotides (PAMmers) stimulate site-specific endonucleolytic cleavage of ssRNA targets, similar to PAM-mediated stimulation of Cas9-catalysed DNA cleavage. Using specially designed PAMmers, Cas9 can be specifically directed to bind or cut RNA targets while avoiding corresponding DNA sequences, and we demonstrate that this strategy enables the isolation of a specific endogenous messenger RNA from cells. These results reveal a fundamental connection between PAM binding and substrate selection by Cas9, and highlight the utility of Cas9 for programmable transcript recognition without the need for tags.

  13. Hyperspectral Aerosol Optical Depths from TCAP Flights

    SciTech Connect

    Shinozuka, Yohei; Johnson, Roy R.; Flynn, Connor J.; Russell, P. B.; Schmid, Beat; Redemann, Jens; Dunagan, Stephen; Kluzek, Celine D.; Hubbe, John M.; Segal-Rosenheimer, Michal; Livingston, J. M.; Eck, T.; Wagener, Richard; Gregory, L.; Chand, Duli; Berg, Larry K.; Rogers, Ray; Ferrare, R. A.; Hair, John; Hostetler, Chris A.; Burton, S. P.

    2013-11-13

    4STAR (Spectrometer for Sky-Scanning, Sun-Tracking Atmospheric Research), the world’s first hyperspectral airborne tracking sunphotometer, acquired aerosol optical depths (AOD) at 1 Hz during all July 2012 flights of the Two Column Aerosol Project (TCAP). Root-mean square differences from AERONET ground-based observations were 0.01 at wavelengths between 500-1020 nm, 0.02 at 380 and 1640 nm and 0.03 at 440 nm in four clear-sky fly-over events, and similar in ground side-by-side comparisons. Changes in the above-aircraft AOD across 3-km-deep spirals were typically consistent with integrals of coincident in situ (on DOE Gulfstream 1 with 4STAR) and lidar (on NASA B200) extinction measurements within 0.01, 0.03, 0.01, 0.02, 0.02, 0.02 at 355, 450, 532, 550, 700, 1064 nm, respectively, despite atmospheric variations and combined measurement uncertainties. Finer vertical differentials of the 4STAR measurements matched the in situ ambient extinction profile within 14% for one homogeneous column. For the AOD observed between 350-1660 nm, excluding strong water vapor and oxygen absorption bands, estimated uncertainties were ~0.01 and dominated by (then) unpredictable throughput changes, up to +/-0.8%, of the fiber optic rotary joint. The favorable intercomparisons herald 4STAR’s spatially-resolved high-frequency hyperspectral products as a reliable tool for climate studies and satellite validation.

  14. Observations of mercury-containing aerosols.

    PubMed

    Murphy, D M; Hudson, P K; Thomson, l D S; Sheridan, P J; Wilson, J C

    2006-05-15

    In situ analyses with a laser ionization mass spectrometer have shown that a large fraction of aerosols in the bottom few kilometers of the stratosphere contain small amounts of mercury (1). Electron microscopy of particles collected near the tropopause has also detected mercury. The distribution of mercury onto many particles, including those less than 20 nm in diameter, indicates that the mercury is from local condensation of mercury compounds onto particles rather than transport of mercury-rich aerosols from surface sources. Although the results are only semiquantitative, they suggest that most of the mercury in the lower stratosphere is converted into the particulate phase. Mercury-containing particles were present at both middle latitudes and the tropics in two seasons. There is therefore good reason to believe that particulate mercury above the tropopause is global and could affect the atmospheric lifetime of mercury. There are indications that bromine and/ or iodine may be involved in the conversion of mercury from the gas to particle phase. Measurements at altitudes below 5 km did not find mercury in any particles despite sampling some particles that clearly originated in the stratosphere. This indicates that the particulate mercury from the lower stratosphere may be volatile enough to evaporate or decompose once particles reach warmer temperatures.

  15. Cas9 gRNA engineering for genome editing, activation and repression.

    PubMed

    Kiani, Samira; Chavez, Alejandro; Tuttle, Marcelle; Hall, Richard N; Chari, Raj; Ter-Ovanesyan, Dmitry; Qian, Jason; Pruitt, Benjamin W; Beal, Jacob; Vora, Suhani; Buchthal, Joanna; Kowal, Emma J K; Ebrahimkhani, Mohammad R; Collins, James J; Weiss, Ron; Church, George

    2015-11-01

    We demonstrate that by altering the length of Cas9-associated guide RNA (gRNA) we were able to control Cas9 nuclease activity and simultaneously perform genome editing and transcriptional regulation with a single Cas9 protein. We exploited these principles to engineer mammalian synthetic circuits with combined transcriptional regulation and kill functions governed by a single multifunctional Cas9 protein.

  16. Cas9 gRNA engineering for genome editing, activation and repression

    SciTech Connect

    Kiani, Samira; Chavez, Alejandro; Tuttle, Marcelle; Hall, Richard N.; Chari, Raj; Ter-Ovanesyan, Dmitry; Qian, Jason; Pruitt, Benjamin W.; Beal, Jacob; Vora, Suhani; Buchthal, Joanna; Kowal, Emma J. K.; Ebrahimkhani, Mohammad R.; Collins, James J.; Weiss, Ron; Church, George

    2015-09-07

    Here we demonstrate that by altering the length of Cas9-associated guide RNA(gRNA) we were able to control Cas9 nuclease activity and simultaneously perform genome editing and transcriptional regulation with a single Cas9 protein. We exploited these principles to engineer mammalian synthetic circuits with combined transcriptional regulation and kill functions governed by a single multifunctional Cas9 protein.

  17. Chemical aerosol Raman detector

    NASA Astrophysics Data System (ADS)

    Aggarwal, R. L.; Farrar, L. W.; Di Cecca, S.; Amin, M.; Perkins, B. G.; Clark, M. L.; Jeys, T. H.; Sickenberger, D. W.; D'Amico, F. M.; Emmons, E. D.; Christesen, S. D.; Kreis, R. J.; Kilper, G. K.

    2017-03-01

    A sensitive chemical aerosol Raman detector (CARD) has been developed for the trace detection and identification of chemical particles in the ambient atmosphere. CARD includes an improved aerosol concentrator with a concentration factor of about 40 and a CCD camera for improved detection sensitivity. Aerosolized isovanillin, which is relatively safe, has been used to characterize the performance of the CARD. The limit of detection (SNR = 10) for isovanillin in 15 s has been determined to be 1.6 pg/cm3, which corresponds to 6.3 × 109 molecules/cm3 or 0.26 ppb. While less sensitive, CARD can also detect gases. This paper provides a more detailed description of the CARD hardware and detection algorithm than has previously been published.

  18. Aircraft measurements of aerosol properties during GoAmazon - G1 and HALO inter-comparison

    NASA Astrophysics Data System (ADS)

    Mei, F.; Cecchini, M. A.; Wang, J.; Tomlinson, J. M.; Comstock, J. M.; Hubbe, J. M.; Pekour, M. S.; Machado, L.; Wendisch, M.; Longo, K.; Martin, S. T.; Schmid, B.; Weinzierl, B.; Krüger, M. L.; Zöger, M.

    2015-12-01

    Currently, the indirect effects of atmospheric aerosols remain the most uncertain components in forcing of climate change over the industrial period (IPCC, 2013). This large uncertainty is partially a result of our incomplete understanding of the ability of particles to form cloud droplets under atmospherically relevant supersaturations. One objective of the US Department of Energy (DOE) Green Ocean Amazon Project (GoAmazon2014/5) is to understand the influence of the emission from Manaus, a tropical megacity, on aerosol size, concentration, and chemical composition, and their impact on cloud condensation nuclei (CCN) spectrum. The GoAmazon2014/5 study was an international campaign with the collaboration efforts from US, Brazil and Germany. During the intensive operation period, in the dry season (Sep. 1st - Oct. 10th, 2014), aerosol concentration, size distributions, and CCN spectra, both under pristine conditions and inside the Manaus plume, were characterized in-situ from the DOE Gulfstream-1 (G-1) research aircraft and German HALO aircraft during 4 coordinated flights on Sep. 9th, Sep. 16th, Sep 21st and Oct. 1st, 2014. During those four flights, aerosol number concentrations and CCN concentrations at two supersaturations (0.25% and 0.5%) were measured by condensation particle counters (CPCs) and a DMT dual column CCN counter onboard both G-1 and HALO. Aerosol size distribution was also measured by a Fast Integrated Mobility Spectrometer (FIMS) aboard the G-1 and is compared with the size distribution from Ultra High Sensitivity Aerosol Spectrometer - Airborne (UHSAS-A, DMT), which were deployed both on the G-1 and the HALO. Good agreement between the aerosol properties measured from the two aircraft has been achieved. The vertical profiles of aerosol size distribution and CCN spectrum will be discussed.

  19. Evidence for Novel Atmospheric Organic Aerosol Measured in a Bornean Rainforest

    NASA Astrophysics Data System (ADS)

    Robinson, N. H.; Hamilton, J. F.; Allan, J. D.; Langford, B.; Oram, D. E.; Chen, Q.; Ward, M. W.; Hewitt, C. N.; Martin, S. T.; Coe, H.; McFiggans, G. B.

    2009-12-01

    The tropics emit a huge amount of volatile organic compounds (VOCs) into the Earth’s atmosphere. The processes by which these gases are oxidised to form secondary organic aerosol (SOA) are currently not well understood or quantified. Intensive field measurements were carried out as part of the Oxidant and Particle Photochemical Processes (OP3) and the Aerosol Coupling in the Earth System (ACES) projects around pristine rainforest in Malaysian Borneo. This is the first campaign of its type in a South East Asian rainforest. We present detailed organic aerosol composition measurements made using an Aerodyne High Resolution Time of Flight Aerosol Mass Spectrometer (HR-ToF-AMS) at Bukit Atur, a Global Atmosphere Watch site located in the Danum Valley Conservation Area. This is a state-of-the-art field deployable instrument that can provide real time composition, mass loading and aerodynamic particle sizing information. In addition, the mass spectral resolution is sufficient to perform an analysis of the elemental composition of the organic species present. Off line analysis of filter samples was performed using comprehensive two-dimensional gas chromatography coupled to time of flight mass spectrometry (GCxGC/ToFMS). This technique provide a more detailed chemical characterisation of the SOA, allowing direct links back to gas phase precursors. The ground site data are compared with Aerodyne Compact Time of Flight Aerosol Mass Spectrometer (C-ToF-AMS) measurements made on the UK Facility for Airborne Atmospheric Measurements (FAAM) BAe-146 research aircraft. Airborne measurements were made above pristine rainforest surrounding the Danum Valley site, as well as nearby oil palm agricultural sites and palm oil rendering plants. Proton Transfer Reaction Mass Spectrometry (PTRMS) measurements of VOCs were made at the ground site and from the FAAM aircraft. Novel organic aerosol was measured by both AMSs, and identified by GCxGC/ToFMS analysis. The aerosol component was

  20. Grossesse intra murale à propos d'un cas

    PubMed Central

    de Tové, Kofi-Mensa Savi; Salifou, Kabibou; Imorou, Rachidi Sidi; Biaou, Olivier; Boco, Vicentia

    2015-01-01

    La grossesse intra-murale est la variété la plus rare de grossesse extra-utérine. Il s'agit de la localisation de l’œuf dans l’épaisseur du myomètre. En cas de retard diagnostic, l’évolution peut être catastrophique avec rupture utérine et hémorragie cataclysmique. L’échographie permet dans certains cas un diagnostic pré opératoire. Les auteurs rapportent un cas survenu chez une patiente aux antécédents de curetage. PMID:26448812

  1. Orbital period determination in an eclipsing dwarf nova HT Cas

    NASA Astrophysics Data System (ADS)

    Bąkowska, Karolina; Olech, Arkadiusz

    2014-09-01

    HT Cassiopeiae was discovered over seventy years ago (Hoffmeister 1943). Unfortunately, for 35 years this object did not receive any attention, until the eclipses of HT Cas were observed by Bond. After a first analysis, Patterson (1981) called HT Cas "a Rosetta stone among dwarf novae". Since then, the literature on this star is still growing, reaching several dozens of publications. We present an orbital period determination of HT Cas during the November 2010 super-outburst, but also during a longer time span, to check its stability.

  2. Engine spectrometer probe and method of use

    NASA Technical Reports Server (NTRS)

    Barkhoudarian, Sarkis (Inventor); Kittinger, Scott A. (Inventor)

    2006-01-01

    The engine spectrometer probe and method of using the same of the present invention provides a simple engine spectrometer probe which is both lightweight and rugged, allowing an exhaust plume monitoring system to be attached to a vehicle, such as the space shuttle. The engine spectrometer probe can be mounted to limit exposure to the heat and debris of the exhaust plume. The spectrometer probe 50 comprises a housing 52 having an aperture 55 and a fiber optic cable 60 having a fiber optic tip 65. The fiber optic tip 65 has an acceptance angle 87 and is coupled to the aperture 55 so that the acceptance angle 87 intersects the exhaust plume 30. The spectrometer probe can generate a spectrum signal from light in the acceptance angle 506 and the spectrum signal can be provided to a spectrometer 508.

  3. New results from Compton spectrometer experiments

    NASA Astrophysics Data System (ADS)

    Gehring, Amanda; Espy, Michelle; Haines, Todd; Webb, Timothy

    2016-09-01

    Over the past three years, a Compton spectrometer has successfully measured the x-ray spectra of intense radiographic sources. In this method, a collimated beam of x-rays incident on a convertor foil ejects Compton electrons. A collimator in the entrance to the spectrometer selects the forward-scattered electrons, which enter the magnetic field region of the spectrometer. The position of the electrons at the magnet's focal plane is proportional to the square root of their momentum, allowing the x-ray spectrum to be reconstructed. The spectrometer is a neodymium-iron magnet which measures spectra in the less than 1 MeV to 20 MeV energy range. In addition, a new spectrometer has been constructed that is a samarium-cobalt magnet with a calculated energy range of 50 keV to 4 MeV. The spectrometers have been fielded at both continuous and pulsed power facilities. Recent experimental results will be presented.