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Sample records for affect marine organisms

  1. Potential Marine Organisms Affecting Airborne Primary Organic Matter

    NASA Astrophysics Data System (ADS)

    Aller, J. Y.; Alpert, P. A.; Knopf, D. A.

    2012-12-01

    The oceans cover 70% of earth with the marine environment contributing ~50% of the global biomass. Particularly during periods of high biological activity associated with phytoplankton blooms, primary emitted aerosol particles dominated by organic compounds in the submicron size range, are ejected from surface waters increasing in concentration exponentially with overlying wind speeds. This is significant for clouds and climate particularly over nutrient rich polar seas, where seawater concentrations of biogenic particles can reach 109 cells per ml during spring phytoplankton blooms, and even 106 cells per ml in winter when empty frustules and fragments of diatoms are resuspensed from shallow shelf sediments by strong winds, and mix with living pico- and nanoplankton in surface sea waters. This organic aerosol fraction can have a significant impact on the ability of ocean derived aerosol to act as cloud condensation nuclei. It has been shown that small insoluble organic particles are aerosolized from the sea surface microlayer (SML) via bubble bursting. The exact composition and complexity of the SML varies spatially and temporally but includes phytoplankton cells, microorganisms, organic debris, and a complex mixture of proteins, polysaccharides, humic-type material and waxes, microgels and colloidal nanogels, and strong surface active lipids. The specific chemical composition is dependent on the fractionation of organic matter which originates from in-situ production, from underlying water and even from atmospheric deposition. These conditions will most likely determine the nature of the organic and biogenic material. Here we review the types, sizes, and properties of ocean-derived particles and organic material which present potential candidates for airborne biogenic and organic particles.

  2. Marine organic geochemistry in industrially affected coastal areas in Greece: Hydrocarbons in surface sediments

    NASA Astrophysics Data System (ADS)

    Hatzianestis, Ioannis

    2015-04-01

    Hydrocarbons are abundant components of the organic material in coastal zones. Their sources are mainly anthropogenic, but several natural ones have also been recognized. Among hydrocarbons, the polycyclic aromatic ones (PAHs) have received special attention since they considered as hazardous environmental chemicals and are included in priority pollutant lists. The purpose of this study was to investigate the distribution, sources and transport pathways of hydrocarbons in marine areas in Greece directly influenced from the operation of major industrial units in the coastal zone by using a molecular marker approach, characteristic compositional patterns and related indices and also to evaluate their potential toxicity. Thirty two surface sediment samples were collected from three marine areas: a) Antikyra bay in Korinthiakos gulf, affected from the operation of an alumina and production plant b) Larymna bay in Noth Evoikos, affected from the operation of a nickel production plant and c) Aliveri bay in South Evoikos Gulf, affected from a cement production plant. In all the studied areas aquaculture and fishing activities have been also developed in the coastal zone. High aliphatic hydrocarbon (AHC) concentrations (~500 μg/g), indicating significant petroleum related inputs, were measured only in Antikyra bay. In all the other samples, AHC values were below 100 μg/g. N-alkanes were the most prominent resolved components (R) with an elevated odd to even carbon number preference, revealing the high importance of terrestrial inputs in the study areas. The unresolved complex mixture (UCM) was the major component of the aliphatic fraction (UCM/R > 4), indicating a chronic oil pollution. A series of hopanes were also identified, with patterns characteristic of oil-derived hydrocarbons, further confirming the presence of pollutant inputs from fossil fuel products. Extremely high PAH concentrations (> 100,000 ng/g) were found in the close vicinity of the alumina production

  3. Sulfated compounds from marine organisms.

    PubMed

    Kornprobst, J M; Sallenave, C; Barnathan, G

    1998-01-01

    More than 500 sulfated compounds have been isolated from marine organisms so far but most of them originate from two phyla only, Spongia and Echinodermata. The sulfated compounds are presented according to the phyla they have been identified from and to their chemical structures. Biological activities, when available, are also given. Macromolecules have also been included in this review but without structural details. PMID:9530808

  4. Cold adaptation in marine organisms.

    PubMed

    Johnston, I A

    1990-01-30

    Animals from polar seas exhibit numerous so called resistance adaptations that serve to maintain homeostasis at low temperature and prevent lethal freezing injury. Specialization to temperatures at or below 0 degrees C is associated with an inability to survive at temperatures above 3-8 degrees C. Polar fish synthesize various types of glycoproteins or peptides to lower the freezing point of most extracellular fluid compartments in a non-colligative manner. Antifreeze production is seasonal in boreal species and is often initiated by environmental cues other than low temperature, particularly short day lengths. Most of the adaptations that enable intertidal invertebrates to survive freezing are associated with their ability to withstand ariel exposure. Unique adaptations for freezing avoidance include the synthesis of low molecular mass ice-nucleating proteins that control and induce extracellular ice-formation. Marine poikilotherms also exhibit a range of capacity adaptations that increase the rate of some physiological processes so as to partially compensate for the effects of low temperature. However, the rate of embryonic development in a diverse range of marine organisms shows no evidence of temperature compensation. This results in a significant lengthening of the time from fertilization to hatching in polar, relative to temperate, species. Some aspects of the physiology of polar marine species, such as low metabolic and slow growth rates, probably result from a combination of low temperature and other factors such as the highly seasonal nature of food supplies. Although neuromuscular function shows a partial capacity adaptation in Antarctic fish, maximum swimming speeds are lower than for temperate and tropical species, particularly for early stages in the life history. PMID:1969650

  5. Marine Toxins Potently Affecting Neurotransmitter Release

    NASA Astrophysics Data System (ADS)

    Meunier, Frédéric A.; Mattei, César; Molgó, Jordi

    Synapses are specialised structures where interneuronal communication takes place. Not only brain function is absolutely dependent on synaptic activity, but also most of our organs are intimately controlled by synaptic activity. Synapses re therefore an ideal target to act upon and poisonous species have evolved fascinating neurotoxins capable of shutting down neuronal communication by blocking or activating essential components of the synapse. By hijacking key proteins of the communication machinery, neurotoxins are therefore extremely valuable tools that have, in turn, greatly helped our understanding of synaptic biology. Moreover, analysis and understanding of the molecular strategy used by certain neurotoxins has allowed the design of entirely new classes of drugs acting on specific targets with high selectivity and efficacy. This chapter will discuss the different classes of marine neurotoxins, their effects on neurotransmitter release and how they act to incapacitate key steps in the process leading to synaptic vesicle fusion.

  6. Pathobiology of marine and estuarine organisms

    SciTech Connect

    Couch, J.A.; Fournie, J.W.

    1992-12-01

    The book is an up-to-date compendium of scientific findings related to diseases of marine and estuarine organisms. The information was presented at the Gulf Breeze Symposium on Marine and Estuarine Disease Research sponsored by the U.S. Environmental Protection Agency (EPA) Environmental Monitoring and Assessment Program (EMAP) held in October 1990 on Pensacola Beach, Florida. Authors review the state-of-the-science and recommend research for future studies of the impact of xenobiotics and other anthropogenic stress factors on disease processes in marine and estuarine organisms.

  7. Colour vision in marine organisms.

    PubMed

    Marshall, Justin; Carleton, Karen L; Cronin, Thomas

    2015-10-01

    Colour vision in the marine environment is on average simpler than in terrestrial environments with simple or no colour vision through monochromacy or dichromacy. Monochromacy is found in marine mammals and elasmobranchs, including whales and sharks, but not some rays. Conversely, there is also a greater diversity of colour vision in the ocean than on land, examples being the polyspectral stomatopods and the many colour vision solutions found among reef fish. Recent advances in sequencing reveal more opsin (visual pigment) types than functionally useful at any one time. This diversity arises through opsin duplication and conversion. Such mechanisms allow pick-and-mix adaptation that tunes colour vision on a variety of very short non-evolutionary timescales. At least some of the diversity in marine colour vision is best explained as unconventional colour vision or as neutral drift. PMID:25725325

  8. Noise in the Sea and Its Impacts on Marine Organisms

    PubMed Central

    Peng, Chao; Zhao, Xinguo; Liu, Guangxu

    2015-01-01

    With the growing utilization and exploration of the ocean, anthropogenic noise increases significantly and gives rise to a new kind of pollution: noise pollution. In this review, the source and the characteristics of noise in the sea, the significance of sound to marine organisms, and the impacts of noise on marine organisms are summarized. In general, the studies about the impact of noise on marine organisms are mainly on adult fish and mammals, which account for more than 50% and 20% of all the cases reported. Studies showed that anthropogenic noise can cause auditory masking, leading to cochlear damage, changes in individual and social behavior, altered metabolisms, hampered population recruitment, and can subsequently affect the health and service functions of marine ecosystems. However, since different sampling methodologies and unstandarized measurements were used and the effects of noise on marine organisms are dependent on the characteristics of the species and noise investigated, it is difficult to compare the reported results. Moreover, the scarcity of studies carried out with other species and with larval or juvenile individuals severely constrains the present understanding of noise pollution. In addition, further studies are needed to reveal in detail the causes for the detected impacts. PMID:26437424

  9. Noise in the Sea and Its Impacts on Marine Organisms.

    PubMed

    Peng, Chao; Zhao, Xinguo; Liu, Guangxu

    2015-10-01

    With the growing utilization and exploration of the ocean, anthropogenic noise increases significantly and gives rise to a new kind of pollution: noise pollution. In this review, the source and the characteristics of noise in the sea, the significance of sound to marine organisms, and the impacts of noise on marine organisms are summarized. In general, the studies about the impact of noise on marine organisms are mainly on adult fish and mammals, which account for more than 50% and 20% of all the cases reported. Studies showed that anthropogenic noise can cause auditory masking, leading to cochlear damage, changes in individual and social behavior, altered metabolisms, hampered population recruitment, and can subsequently affect the health and service functions of marine ecosystems. However, since different sampling methodologies and unstandarized measurements were used and the effects of noise on marine organisms are dependent on the characteristics of the species and noise investigated, it is difficult to compare the reported results. Moreover, the scarcity of studies carried out with other species and with larval or juvenile individuals severely constrains the present understanding of noise pollution. In addition, further studies are needed to reveal in detail the causes for the detected impacts. PMID:26437424

  10. Prevention of marine biofouling using natural compounds from marine organisms.

    PubMed

    Armstrong, E; Boyd, K G; Burgess, J G

    2000-01-01

    All surfaces that are submerged in the sea rapidly become covered by a biofilm. This process, called biofouling, has substantial economic consequences. Paints containing tri-butyl-tin (TBT) and copper compounds are used to protect marine structures by reducing biofouling. However, these compounds have damaging effects on the marine environment, as they are not biodegradable. It has been noted that many seaweeds and invertebrates found in the sea are not covered by a mature biofilm. This is due to the release of compounds into the surrounding seawater that deter the settlement of fouling organisms. In addition, seaweeds and invertebrates have bacteria on their surfaces that produce compounds to deter settling organisms. The production of compounds by bacteria and their living hosts work in concert to protect the hosts' surfaces. All of these compounds can be collected so they may be natural alternatives to TBT and copper compounds. However, the benefits associated with the use of bacteria as sources of these compounds means that bacteria are the organisms of choice for obtaining natural products for antifouling coatings. PMID:11193296

  11. Biomedical Compounds from Marine organisms

    PubMed Central

    Jha, Rajeev Kumar; Zi-rong, Xu

    2004-01-01

    The Ocean, which is called the ‘mother of origin of life’, is also the source of structurally unique natural products that are mainly accumulated in living organisms. Several of these compounds show pharmacological activities and are helpful for the invention and discovery of bioactive compounds, primarily for deadly diseases like cancer, acquired immuno-deficiency syndrome (AIDS), arthritis, etc., while other compounds have been developed as analgesics or to treat inflammation, etc. The life-saving drugs are mainly found abundantly in microorganisms, algae and invertebrates, while they are scarce in vertebrates. Modern technologies have opened vast areas of research for the extraction of biomedical compounds from oceans and seas.

  12. Latitudinal Gradients in Degradation of Marine Dissolved Organic Carbon

    PubMed Central

    Arnosti, Carol; Steen, Andrew D.; Ziervogel, Kai; Ghobrial, Sherif; Jeffrey, Wade H.

    2011-01-01

    Heterotrophic microbial communities cycle nearly half of net primary productivity in the ocean, and play a particularly important role in transformations of dissolved organic carbon (DOC). The specific means by which these communities mediate the transformations of organic carbon are largely unknown, since the vast majority of marine bacteria have not been isolated in culture, and most measurements of DOC degradation rates have focused on uptake and metabolism of either bulk DOC or of simple model compounds (e.g. specific amino acids or sugars). Genomic investigations provide information about the potential capabilities of organisms and communities but not the extent to which such potential is expressed. We tested directly the capabilities of heterotrophic microbial communities in surface ocean waters at 32 stations spanning latitudes from 76°S to 79°N to hydrolyze a range of high molecular weight organic substrates and thereby initiate organic matter degradation. These data demonstrate the existence of a latitudinal gradient in the range of complex substrates available to heterotrophic microbial communities, paralleling the global gradient in bacterial species richness. As changing climate increasingly affects the marine environment, changes in the spectrum of substrates accessible by microbial communities may lead to shifts in the location and rate at which marine DOC is respired. Since the inventory of DOC in the ocean is comparable in magnitude to the atmospheric CO2 reservoir, such a change could profoundly affect the global carbon cycle. PMID:22216139

  13. Antifungal and antiviral products of marine organisms.

    PubMed

    Cheung, Randy Chi Fai; Wong, Jack Ho; Pan, Wen Liang; Chan, Yau Sang; Yin, Cui Ming; Dan, Xiu Li; Wang, He Xiang; Fang, Evandro Fei; Lam, Sze Kwan; Ngai, Patrick Hung Kui; Xia, Li Xin; Liu, Fang; Ye, Xiu Yun; Zhang, Guo Qing; Liu, Qing Hong; Sha, Ou; Lin, Peng; Ki, Chan; Bekhit, Adnan A; Bekhit, Alaa El-Din; Wan, David Chi Cheong; Ye, Xiu Juan; Xia, Jiang; Ng, Tzi Bun

    2014-04-01

    Marine organisms including bacteria, fungi, algae, sponges, echinoderms, mollusks, and cephalochordates produce a variety of products with antifungal activity including bacterial chitinases, lipopeptides, and lactones; fungal (-)-sclerotiorin and peptaibols, purpurides B and C, berkedrimane B and purpuride; algal gambieric acids A and B, phlorotannins; 3,5-dibromo-2-(3,5-dibromo-2-methoxyphenoxy)phenol, spongistatin 1, eurysterols A and B, nortetillapyrone, bromotyrosine alkaloids, bis-indole alkaloid, ageloxime B and (-)-ageloxime D, haliscosamine, hamigeran G, hippolachnin A from sponges; echinoderm triterpene glycosides and alkene sulfates; molluscan kahalalide F and a 1485-Da peptide with a sequence SRSELIVHQR; and cepalochordate chitotriosidase and a 5026.9-Da antifungal peptide. The antiviral compounds from marine organisms include bacterial polysaccharide and furan-2-yl acetate; fungal macrolide, purpurester A, purpurquinone B, isoindolone derivatives, alterporriol Q, tetrahydroaltersolanol C and asperterrestide A, algal diterpenes, xylogalactofucan, alginic acid, glycolipid sulfoquinovosyldiacylglycerol, sulfated polysaccharide p-KG03, meroditerpenoids, methyl ester derivative of vatomaric acid, lectins, polysaccharides, tannins, cnidarian zoanthoxanthin alkaloids, norditerpenoid and capilloquinol; crustacean antilipopolysaccharide factors, molluscan hemocyanin; echinoderm triterpenoid glycosides; tunicate didemnin B, tamandarins A and B and; tilapia hepcidin 1-5 (TH 1-5), seabream SauMx1, SauMx2, and SauMx3, and orange-spotted grouper β-defensin. Although the mechanisms of antifungal and antiviral activities of only some of the aforementioned compounds have been elucidated, the possibility to use those known to have distinctly different mechanisms, good bioavailability, and minimal toxicity in combination therapy remains to be investigated. It is also worthwhile to test the marine antimicrobials for possible synergism with existing drugs. The prospects of

  14. A marine sink for chlorine in natural organic matter

    NASA Astrophysics Data System (ADS)

    Leri, Alessandra C.; Mayer, Lawrence M.; Thornton, Kathleen R.; Northrup, Paul A.; Dunigan, Marisa R.; Ness, Katherine J.; Gellis, Austin B.

    2015-08-01

    Chloride--the most abundant ion in sea water--affects ocean salinity, and thereby seawater density and ocean circulation. Its lack of reactivity gives it an extremely long residence time. Other halogens are known to be incorporated into marine organic matter. However, evidence of similar transformations of seawater chloride is lacking, aside from emissions of volatile organochlorine by marine algae. Here we report high organochlorine concentrations from 180 to 700 mg kg-1 in natural particulate organic matter that settled into sediment traps at depths between 800 and 3,200 m in the Arabian Sea, taken between 1994 and 1995. X-ray spectromicroscopic imaging of chlorine bonding reveals that this organochlorine exists primarily in concentrated aliphatic forms consistent with lipid chlorination, along with a more diffuse aromatic fraction. High aliphatic organochlorine in particulate material from cultured phytoplankton suggests that primary production is a source of chlorinated organic matter. We also found that particulate algal detritus can act as an organic substrate for abiotic reactions involving Fe2+, H2O2 or light that incorporate chlorine into organic matter at levels up to several grams per kilogram. We conclude that transformations of marine chloride to non-volatile organochlorine through biological and abiotic pathways represent an oceanic sink for this relatively unreactive element.

  15. Principles and application of transgenic technology in marine organisms

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Marine organisms into which a foreign gene or noncoding DNA fragment is artificially introduced and stably integrated in their genomes are termed transgenic marine organisms. Since the first report in 1985, a wide range of transgenic fish and marine bivalve mollusks have been produced by microinjec...

  16. Anomalous 13C enrichment in modern marine organic carbon

    USGS Publications Warehouse

    Arthur, M.A.; Dean, W.E.; Claypool, G.E.

    1985-01-01

    Marine organic carbon is heavier isotopically (13C enriched) than most land-plant or terrestrial organic C1. Accordingly, ??13C values of organic C in modern marine sediments are routinely interpreted in terms of the relative proportions of marine and terrestrial sources of the preserved organic matter2,3. When independent geochemical techniques are used to evaluate the source of organic matter in Cretaceous or older rocks, those rocks containing mostly marine organic C are found typically to have lighter (more-negative) ??13C values than rocks containing mostly terrestrial organic C. Here we conclude that marine photosynthesis in mid-Cretaceous and earlier oceans generally resulted in a greater fractionation of C isotopes and produced organic C having lighter ??13C values. Modern marine photosynthesis may be occurring under unusual geological conditions (higher oceanic primary production rates, lower PCO2) that limit dissolved CO2 availability and minimize carbon isotope fractionation4. ?? 1985 Nature Publishing Group.

  17. Bromination of marine particulate organic matter through oxidative mechanisms

    NASA Astrophysics Data System (ADS)

    Leri, Alessandra C.; Mayer, Lawrence M.; Thornton, Kathleen R.; Ravel, Bruce

    2014-10-01

    Although bromine (Br) is considered conservative in seawater, it exhibits a well established correlation with organic carbon in marine sediments. This carbon-bromine association was recently attributed to covalent bonding, with organobromine in sinking particulates providing a putative link between sedimentary organobromine and organic matter cycling in surface waters. We hypothesized that phytoplankton detritus, a major precursor of sedimentary organic matter, would be susceptible to bromination through oxidative attack. Through a series of model experiments, we demonstrate incorporation of Br into algal particulate detritus through peroxidative and photochemical mechanisms. Peroxidative bromination was enhanced by addition of exogenous bromoperoxidase, but the enzyme was not required for the reaction. Fenton-like reaction conditions also promoted bromination, especially under solar irradiation, implicating radical mechanisms in the euphotic zone as another abiotic source of brominated particulates. These reactions produced aliphatic and aromatic forms of organobromine, suggesting that lipid- and protein-rich components of algal membranes provide suitable substrates for bromination. Biogenic organobromines in certain genera of phytoplankton also appeared in both aliphatic and aromatic forms. Experimental evidence and samples from oceanic midwater sediment traps imply that the aromatic fraction is more stable than the aliphatic. These experiments establish Br as a versatile oxidant in the transformation of planktonic organic matter through both enzymatic and abiotic mechanisms. Organobromine may serve as a marker of oxidative breakdown of marine organic detritus, with the metastable component providing a short-lived indicator of early-stage oxidation. By altering the stability of aliphatic and aromatic moieties, bromination may affect the availability of organic matter to organisms, with consequences for the preservation and degradation of marine organic carbon.

  18. Toxicity of common ions to marine organisms

    SciTech Connect

    Pillard, D.A.; DuFresne, D.L.; Evans, J.

    1995-12-31

    Produced waters from oil and gas drilling operations are typically very saline, and these may cause acute toxicity to marine organisms due to osmotic imbalances as well as to an excess or deficiency of specific common ions. In order to better understand the relationship between toxicity and ion concentration, laboratory toxicity tests were conducted using mysid shrimp (Mysidopsis bahia), sheepshead minnow (Cyprinodon variegatus), and inland silverside (Menidia beryllina). For each species the ionic concentration of standard laboratory water was proportionally increased or decreased to produce test solutions with a range of salinities. Organisms were exposed for 48 hours. Individual ions (sodium, potassium, calcium, magnetsium, strontium, chloride, bromide, sulfate, bicarbonate, and borate) were also manipulated to examine individual ion toxicity. The three test species differ in their tolerance of salinity. Mysid shrimp show a marked decrease in survival at salinities less than approximately 5 ppt. Both fish species tolerated low salinity water, however, silversides were less tolerant of saline waters (salinity greater than 40 ppt). There were also significant differences in the responses of the organisms to different ions. The results show that the salinity of the test solution may play an important role in the responses of the organisms to the produced water effluent. Predictable toxicity/ion relationships developed in this study can be used to estimate whether toxicity in a produced water is a result of common ions, salinity, or some other unknown toxicant.

  19. EXPLORATORY ANALYSIS OF THE EFFECTS OF PARTICULATE CHARACTERISTICS ON THE VARIATION IN PARTITIONING OF NONPOLAR ORGANIC CONTAMINANTS TO MARINE SEDIMENTS

    EPA Science Inventory

    The partitioning of nonpolar organic contaminants to marine sediments is considered to be controlled by the amount of organic carbon present. However, several studies propose that other characteristics of sediments may affect the partitioning of contaminants. For this exploratory...

  20. Bioaccumulation of cadmium in marine organisms.

    PubMed Central

    Frazier, J M

    1979-01-01

    A general review of cadmium concentrations in marine organisms and studies of cadmium bioaccumulation is presented. Factors which influence cadmium concentrations, such as regional differences, seasonal fluctuations and salinity, are discussed and species which are likely to accumulate cadmium identified. Experimental studies designed to investigate the influence of some of these factors on cadmium bioaccumulation in a filter feeding bivalve mollusk, the American oyster (Crassostrea virginica), are presented. Field studies of seasonal dynamics of cadmium in oysters indicate patterns which may be correlated with seasonal physiological activity. The bioaccumulation of cadmium following input to estuarine systems by natural phenomena is observed. Cadmium concentrations in oysters collected from regions of different salinity suggest an inverse relationship between cadmium concentration and salinity. Laboratory experiments designed to investigate mechanisms of cadmium accumulation demonstrate that an inducible cadmium binding protein, similar to metallothiomein, is present in the American oyster. PMID:488051

  1. Rapid Smothering of Coral Reef Organisms by Muddy Marine Snow

    NASA Astrophysics Data System (ADS)

    Fabricius, K. E.; Wolanski, E.

    2000-01-01

    Estuarine mud, when resuspended in nutrient-rich near-shore water, aggregates to marine snow, and within minutes to hours can exert detrimental or even lethal effects on small coral reef organisms. In a pilot study, estuarine mud was suspended in near-shore and off-shore waters of the Great Barrier Reef to a final concentration of 170 mg l -1. The short-term responses of a coral ( Acropora sp.) and coral-inhabiting barnacles (subfamily Pyrgomatidae), exposed to either near-shore or off-shore water, were microscopically observed and video recorded. In the off-shore water treatment, flocculation was minor, and aggregate sizes were c. 50 μm. The organisms were able to clean themselves from these small settling aggregates at low siltation (<0·5 mg cm -2), and struggled and produced mucus only at high siltation (4-5 mg cm -2). In contrast, in near-shore, nutrient-enriched waters, the suspended mud aggregated into large sticky flocs of marine snow (200-2000 μm diameter). The organisms responded to a thin coat of deposited flocs with vigorous cleaning by cirri and tentacle beating. After 5 min struggle, the barnacle stopped moving, calanoid copepods were entangled in the aggregates, and thick layers of mucus were exuded by the coral polyps. Both barnacle and copepods died after <1 h exposure; a short time compared with natural occurrences of marine snow deposition on coral reefs. Enhanced nutrient concentrations are known to contribute to enhance biologically mediated flocculation. This pilot study suggests that the concentration of suspended mud, and extent of stickiness and flocculation, can synergistically affect reef benthos organisms after short exposure. The enclosed macro video recordings clearly visualize these effects, and help convey the important implications for managers: that inshore reefs of the Great Barrier Reef cannot be sustainably managed without managing the adjacent land.

  2. Different carbon sources affect PCB accumulation by marine bivalves.

    PubMed

    Laitano, M V; Silva Barni, M F; Costa, P G; Cledón, M; Fillmann, G; Miglioranza, K S B; Panarello, H O

    2016-02-01

    Pampean creeks were evaluated in the present study as potential land-based sources of PCB marine contamination. Different carbon and nitrogen sources from such creeks were analysed as boosters of PCB bioaccumulation by the filter feeder bivalve Brachidontes rodriguezii and grazer limpet Siphonaria lessoni. Carbon of different source than marine and anthropogenic nitrogen assimilated by organisms were estimated through their C and N isotopic composition. PCB concentration in surface sediments and mollusc samples ranged from 2.68 to 6.46 ng g(-1) (wet weight) and from 1074 to 4583 ng g(-1) lipid, respectively, reflecting a punctual source of PCB contamination related to a landfill area. Thus, despite the low flow of creeks, they should not be underestimated as contamination vectors to the marine environment. On the other hand, mussels PCB bioaccumulation was related with the carbon source uptake which highlights the importance to consider this factor when studying PCB distribution in organisms of coastal systems. PMID:26606107

  3. An overview on genome organization of marine organisms.

    PubMed

    Costantini, Maria

    2015-12-01

    In this review we will concentrate on some general genome features of marine organisms and their evolution, ranging from vertebrate to invertebrates until unicellular organisms. Before genome sequencing, the ultracentrifugation in CsCl led to high resolution of mammalian DNA (without seeing at the sequence). The analytical profile of human DNA showed that the vertebrate genome is a mosaic of isochores, typically megabase-size DNA segments that belong in a small number of families characterized by different GC levels. The recent availability of a number of fully sequenced genomes allowed mapping very precisely the isochores, based on DNA sequences. Since isochores are tightly linked to biological properties such as gene density, replication timing and recombination, the new level of detail provided by the isochore map helped the understanding of genome structure, function and evolution. This led the current level of knowledge and to further insights. PMID:25899406

  4. W Photoprotection in Tropical Marine Organisms

    NASA Technical Reports Server (NTRS)

    Armstrong, Roy A.

    1997-01-01

    Increasing levels of ultraviolet (UV) radiation reaching the earth's surface which results from stratospheric ozone depletions could have serious implications for terrestrial plants and for aquatic organisms within the euphotic zone. A documented 9% decline in ozone at mid-latitudes is considered to produce a 12% increase in harmful UV radiation. The biologically damaging effects of higher UV levels, particularly W-B (280-320 rim), could manifest earlier in the tropics because of the relative thinness of the earth's equatorial ozone layer. Tropical marine organisms are also living close to their upper tolerance levels of water temperature, However, despite the large potential effects on plants and animals, little is known about UV effects on tropical ecosystems. Long-term ecological studies are needed to quantify the effects of increased UV radiation on terrestrial and marine ecosystems and to produce reliable data for prediction. Plants have developed several mechanisms to protect themselves from harmful UV radiation, one of which is the production of secondary leaf pigments that absorb W-B radiation (screening pigments). A higher concentration of screening pigments (e.g. flavonoids) in leaves may be interpreted as a natural response to increased W radiation. If higher concentrations of flavonoids filter out the excessive W radiation, no damage will occur, as suggested by Caldwell et al. (1989) and Tevini (1993). Failure to screen all W-B may result in deleterious effects on photosynthesis, plant genetic material, and plant and leaf morphology and growth. Eventually this will have an impact on ecosystem processes, structure, species composition, and productivity. This paper describes an ongoing project that is assessing the responses of mangroves, seagrasses and corals to W radiation by studying pigment concentrations, biophysical parameters, and variations in spectral reflectance in the field and in W-reduction experiments. Preliminary results on the distribution

  5. Global distribution and climate forcing of marine organic aerosol: 1. Model improvements and evaluation

    SciTech Connect

    Meskhidze, N.; Xu, J.; Gantt, Brett; Zhang, Yang; Nenes, Athanasios; Ghan, Steven J.; Liu, Xiaohong; Easter, Richard C.; Zaveri, Rahul A.

    2011-11-23

    Marine organic aerosol emissions have been implemented and evaluated within the National Center of Atmospheric Research (NCAR)'s Community Atmosphere Model (CAM5) with the Pacific Northwest National Laboratory's 7-mode Modal Aerosol Module (MAM-7). Emissions of marine primary organic aerosols (POA), phytoplanktonproduced isoprene- and monoterpenes-derived secondary organic aerosols (SOA) and methane sulfonate (MS{sup -}) are shown to affect surface concentrations of organic aerosols in remote marine regions. Global emissions of submicron marine POA is estimated to be 7.9 and 9.4 Tg yr{sup -1}, for the Gantt et al. (2011) and Vignati et al. (2010) emission parameterizations, respectively. Marine sources of SOA and particulate MS{sup -} (containing both sulfur and carbon atoms) contribute an additional 0.2 and 5.1 Tg yr{sup -1}, respectively. Widespread areas over productive waters of the Northern Atlantic, Northern Pacific, and the Southern Ocean show marine-source submicron organic aerosol surface concentrations of 100 ngm{sup -3}, with values up to 400 ngm{sup -3} over biologically productive areas. Comparison of long-term surface observations of water insoluble organic matter (WIOM) with POA concentrations from the two emission parameterizations shows that despite revealed discrepancies (often more than a factor of 2), both Gantt et al. (2011) and Vignati et al. (2010) formulations are able to capture the magnitude of marine organic aerosol concentrations, with the Gantt et al. (2011) parameterization attaining better seasonality. Model simulations show that the mixing state of the marine POA can impact the surface number concentration of cloud condensation nuclei (CCN). The largest increases (up to 20 %) in CCN (at a supersaturation (S) of 0.2 %) number concentration are obtained over biologically productive ocean waters when marine organic aerosol is assumed to be externally mixed with sea-salt. Assuming marine organics are internally-mixed with sea

  6. Directory of Marine Education Resources. A Guide to Organizations that Provide Information on Marine Education.

    ERIC Educational Resources Information Center

    Regan, Alison

    This directory of organizations providing information on Marine Education is organized into four sections. Section I is an alphabetical listing of all organizations included in the directory, indicating services available from each organization (education materials, conferences/workshops, teacher training, library, technical assistance, speakers,…

  7. Terrestrial and marine perspectives on modeling organic matter degradation pathways.

    PubMed

    Burd, Adrian B; Frey, Serita; Cabre, Anna; Ito, Takamitsu; Levine, Naomi M; Lønborg, Christian; Long, Matthew; Mauritz, Marguerite; Thomas, R Quinn; Stephens, Brandon M; Vanwalleghem, Tom; Zeng, Ning

    2016-01-01

    Organic matter (OM) plays a major role in both terrestrial and oceanic biogeochemical cycles. The amount of carbon stored in these systems is far greater than that of carbon dioxide (CO2 ) in the atmosphere, and annual fluxes of CO2 from these pools to the atmosphere exceed those from fossil fuel combustion. Understanding the processes that determine the fate of detrital material is important for predicting the effects that climate change will have on feedbacks to the global carbon cycle. However, Earth System Models (ESMs) typically utilize very simple formulations of processes affecting the mineralization and storage of detrital OM. Recent changes in our view of the nature of this material and the factors controlling its transformation have yet to find their way into models. In this review, we highlight the current understanding of the role and cycling of detrital OM in terrestrial and marine systems and examine how this pool of material is represented in ESMs. We include a discussion of the different mineralization pathways available as organic matter moves from soils, through inland waters to coastal systems and ultimately into open ocean environments. We argue that there is strong commonality between aspects of OM transformation in both terrestrial and marine systems and that our respective scientific communities would benefit from closer collaboration. PMID:26015089

  8. Toxicity, Bioaccumulation and Biotransformation of Silver Nanoparticles in Marine Organisms

    EPA Science Inventory

    The toxicity, bioaccumulation and biotransformation of citrate and polyvinylpyrrolidone (PVP) capped silver nanoparticles (NPs) (AgNP-citrate and AgNP-PVP) and titanium dioxide (TiO2) NPs in marine organisms via marine sediment exposure were investigated. Results from 7-d sedimen...

  9. Toxicity, Bioaccumulation and Biotransformation of Silver Nanoparticles in Marine Organisms.

    EPA Science Inventory

    The toxicity, bioaccumulation and biotransformation of citrate and polyvinylpyrrolidone (PVP) coated silver nanoparticles (NPs) (AgNP-citrate and AgNP-PVP) in marine organisms via marine sediment exposure was investigated. Results from 7-d sediment toxicity tests indicate that Ag...

  10. Chemical ecology of marine organisms: an overview

    SciTech Connect

    Bakus, G.V.; Schutte, B.; Targett, N.M.

    1986-05-01

    An overview of marine chemical ecology is presented. Emphasis is placed on antipredation, invertebrate-toxic host relationships, antifouling, competition for space, species dominance, and the chemistry of ecological interactions.

  11. Are interpretations of ancient marine temperatures constrained by the presence of ancient marine organisms?

    NASA Technical Reports Server (NTRS)

    Valentine, J. W.

    1985-01-01

    The relationship between marine temperature and marine organisms is investigated. The adaptation of organisms to extreme temperatures is studied; it is observed that chemautotrophic and chemoheterotrophic prokaryotes adapt to 100 C, photoautotrophic prokaryotes to 73 C, and fungi to 60 C. The physiological and molecular factors related to thermal limits in organisms such as enzymes, lipids, or plasma membranes, are examined. Two types of thermal adaptations, resistance and capacity, are detected in organisms. Reasons for species distributions according to temperature barriers are proposed by Read (1967) and Bullock (1955) and are related to enzyme limits. The effects of an organism's composition on thermal stability is analyzed.

  12. Spatial factors affecting statistical power in testing marine fauna displacement.

    PubMed

    Pérez Lapeña, B; Wijnberg, K M; Stein, A; Hulscher, S J M H

    2011-10-01

    Impacts of offshore wind farms on marine fauna are largely unknown. Therefore, one commonly adheres to the precautionary principle, which states that one shall take action to avoid potentially damaging impacts on marine ecosystems, even when full scientific certainty is lacking. We implement this principle by means of a statistical power analysis including spatial factors. Implementation is based on geostatistical simulations, accommodating for zero-inflation in species data. We investigate scenarios in which an impact assessment still has to be carried out. Our results show that the environmental conditions at the time of the survey is the most influential factor on power. This is followed by survey effort and species abundance in the reference situation. Spatial dependence in species numbers at local scales affects power, but its effect is smaller for the scenarios investigated. Our findings can be used to improve effectiveness of the economical investment for monitoring surveys. In addition, unnecessary extra survey effort, and related costs, can be avoided when spatial dependence in species abundance is present and no improvement on power is achieved. PMID:22073657

  13. Correlation Between Ecospace and Metabolic Rate of Marine Organisms Through Geologic Time

    NASA Astrophysics Data System (ADS)

    Duong, C.; Tenorio, A.; Heim, N. A.; Payne, J.

    2015-12-01

    Marine organisms are the most abundant fossils scientists have discovered in the fossil record. Various factors affect the survival rate of individual organisms and entire genera including metabolic rate, genetic diversity, environmental availability, and ecology. We however chose to focus our attention on studying mean metabolic rates in correlation to life modes. A marine organism's life mode is determined by three criteria: tiering, motility, and feeding mechanism. We believe an organism's life mode has an effect on its survivorship, especially since ecospace is the "primary determinant of routine metabolic rate for marine organisms" (Seibel & Drazen 2007). Using the metabolic equation, we were able to plot metabolic rate changes for various life modes over time. Seibel and Drazen (2007) explain that "metabolic variation in the ocean results from interspecific differences in ecological energy demand," thus allowing us to hypothesize that with different combinations of life modes, different marine organisms will have varying metabolic rates. To further compare our data, we created a heatmap to show the change in metabolic rates over the last 540 million years. Based on the collection of data, metabolic rates of marine organisms have shown an increasing trend. When analyzing ecospaces, pelagic (living in the water column), free moving organisms have relatively high metabolic rates in comparison to other modes of tiering. In other life modes, there's a general trend of genera maintaining a stabilized and moderate metabolic rate that is neither extremely high nor low.

  14. Implementing marine organic aerosols into the GEOS-Chem model

    DOE PAGESBeta

    Gantt, B.; Johnson, M. S.; Crippa, M.; Prévôt, A. S. H.; Meskhidze, N.

    2014-09-09

    Marine organic aerosols (MOA) have been shown to play an important role in tropospheric chemistry by impacting surface mass, cloud condensation nuclei, and ice nuclei concentrations over remote marine and coastal regions. In this work, an online marine primary organic aerosol emission parameterization, designed to be used for both global and regional models, was implemented into the GEOS-Chem model. The implemented emission scheme improved the large underprediction of organic aerosol concentrations in clean marine regions (normalized mean bias decreases from -79% when using the default settings to -12% when marine organic aerosols are added). Model predictions were also in goodmore » agreement (correlation coefficient of 0.62 and normalized mean bias of -36%) with hourly surface concentrations of MOA observed during the summertime at an inland site near Paris, France. Our study shows that MOA have weaker coastal-to-inland concentration gradients than sea-salt aerosols, leading to several inland European cities having > 10% of their surface submicron organic aerosol mass concentration with a marine source. The addition of MOA tracers to GEOS-Chem enabled us to identify the regions with large contributions of freshly-emitted or aged aerosol having distinct physicochemical properties, potentially indicating optimal locations for future field studies.« less

  15. Implementing marine organic aerosols into the GEOS-Chem model

    DOE PAGESBeta

    Gantt, B.; Johnson, M. S.; Crippa, M.; Prévôt, A. S. H.; Meskhidze, N.

    2015-03-17

    Marine-sourced organic aerosols (MOAs) have been shown to play an important role in tropospheric chemistry by impacting surface mass, cloud condensation nuclei, and ice nuclei concentrations over remote marine and coastal regions. In this work, an online marine primary organic aerosol emission parameterization, designed to be used for both global and regional models, was implemented into the GEOS-Chem (Global Earth Observing System Chemistry) model. The implemented emission scheme improved the large underprediction of organic aerosol concentrations in clean marine regions (normalized mean bias decreases from -79% when using the default settings to -12% when marine organic aerosols are added). Modelmore » predictions were also in good agreement (correlation coefficient of 0.62 and normalized mean bias of -36%) with hourly surface concentrations of MOAs observed during the summertime at an inland site near Paris, France. Our study shows that MOAs have weaker coastal-to-inland concentration gradients than sea-salt aerosols, leading to several inland European cities having >10% of their surface submicron organic aerosol mass concentration with a marine source. The addition of MOA tracers to GEOS-Chem enabled us to identify the regions with large contributions of freshly emitted or aged aerosol having distinct physicochemical properties, potentially indicating optimal locations for future field studies.« less

  16. Metalloproteinase Inhibitors: Status and Scope from Marine Organisms

    PubMed Central

    Thomas, Noel Vinay; Kim, Se-Kwon

    2010-01-01

    Marine environment has been the source of diverse life forms that produce different biologically active compounds. Marine organisms are consistently contributing with unparalleled bioactive compounds that have profound applications in nutraceuticals, cosmeceuticals, and pharmaceuticals. In this process, screening of natural products from marine organisms that could potentially inhibit the expression of metalloproteinases has gained a huge popularity, which became a hot field of research in life sciences. Metalloproteinases, especially, matrix metalloproteinases (MMPs) are a class of structurally similar enzymes that contribute to the extracellular matrix degradation and play major role in normal and pathological tissue remodeling. Imbalance in the expression of MMPs leads to severe pathological condition that could initiate cardiac, cartilage, and cancer-related diseases. Three decades of endeavor for designing potent matrix metalloproteinase inhibitory substances (MMPIs) with many not making upto final clinical trials seek new resources for devising MMPIs. Umpteen number of medicinally valuable compounds being reported from marine organisms, which encourage current researchers to screen potent MMPIs from marine organisms. In this paper, we have made an attempt to report the metalloproteinase inhibiting substances from various marine organisms. PMID:21197102

  17. Implementing marine organic aerosols into the GEOS-Chem model

    NASA Astrophysics Data System (ADS)

    Gantt, B.; Johnson, M. S.; Crippa, M.; Prévôt, A. S. H.; Meskhidze, N.

    2014-09-01

    Marine organic aerosols (MOA) have been shown to play an important role in tropospheric chemistry by impacting surface mass, cloud condensation nuclei, and ice nuclei concentrations over remote marine and coastal regions. In this work, an online marine primary organic aerosol emission parameterization, designed to be used for both global and regional models, was implemented into the GEOS-Chem model. The implemented emission scheme improved the large underprediction of organic aerosol concentrations in clean marine regions (normalized mean bias decreases from -79% when using the default settings to -12% when marine organic aerosols are added). Model predictions were also in good agreement (correlation coefficient of 0.62 and normalized mean bias of -36%) with hourly surface concentrations of MOA observed during the summertime at an inland site near Paris, France. Our study shows that MOA have weaker coastal-to-inland concentration gradients than sea-salt aerosols, leading to several inland European cities having > 10% of their surface submicron organic aerosol mass concentration with a marine source. The addition of MOA tracers to GEOS-Chem enabled us to identify the regions with large contributions of freshly-emitted or aged aerosol having distinct physicochemical properties, potentially indicating optimal locations for future field studies.

  18. Implementing marine organic aerosols into the GEOS-Chem model

    NASA Astrophysics Data System (ADS)

    Gantt, B.; Johnson, M. S.; Crippa, M.; Prévôt, A. S. H.; Meskhidze, N.

    2015-03-01

    Marine-sourced organic aerosols (MOAs) have been shown to play an important role in tropospheric chemistry by impacting surface mass, cloud condensation nuclei, and ice nuclei concentrations over remote marine and coastal regions. In this work, an online marine primary organic aerosol emission parameterization, designed to be used for both global and regional models, was implemented into the GEOS-Chem (Global Earth Observing System Chemistry) model. The implemented emission scheme improved the large underprediction of organic aerosol concentrations in clean marine regions (normalized mean bias decreases from -79% when using the default settings to -12% when marine organic aerosols are added). Model predictions were also in good agreement (correlation coefficient of 0.62 and normalized mean bias of -36%) with hourly surface concentrations of MOAs observed during the summertime at an inland site near Paris, France. Our study shows that MOAs have weaker coastal-to-inland concentration gradients than sea-salt aerosols, leading to several inland European cities having >10% of their surface submicron organic aerosol mass concentration with a marine source. The addition of MOA tracers to GEOS-Chem enabled us to identify the regions with large contributions of freshly emitted or aged aerosol having distinct physicochemical properties, potentially indicating optimal locations for future field studies.

  19. Factors influencing organic carbon preservation in marine sediments

    NASA Technical Reports Server (NTRS)

    Canfield, D. E.

    1994-01-01

    The organic matter that escapes decomposition is buried and preserved in marine sediments, with much debate as to whether the amount depends on bottom-water O2 concentration. One group argues that decomposition is more efficient with O2, and hence, organic carbon will be preferentially oxidized in its presence, and preserved in its absence. Another group argues that the kinetics of organic matter decomposition are similar in the presence and absence of O2, and there should be no influence of O2 on preservation. A compilation of carbon preservation shows that both groups are right, depending on the circumstances of deposition. At high rates of deposition, such as near continental margins, little difference in preservation is found with varying bottom-water O2. It is important that most carbon in these sediments decomposes by anaerobic pathways regardless of bottom-water O2. Hence, little influence of bottom-water O2 on preservation would, in fact, be expected. As sedimentation rate drops, sediments deposited under oxygenated bottom water become progressively more aerobic, while euxinic sediments remain anaerobic. Under these circumstances, the relative efficiencies of aerobic and anaerobic decomposition could affect preservation. Indeed, enhanced preservation is observed in low-O2 and euxinic environments. To explore in detail the factors contributing to this enhanced carbon preservation, aspects of the biochemistries of the aerobic and anaerobic process are reviewed. Other potential influences on preservation are also explored. Finally, a new model for organic carbon decomposition, the "pseudo-G" model, is developed. This model couples the degradation of refractory organic matter to the overall metabolic activity of the sediment, and has consequences for carbon preservation due to the mixing together of labile and refractory organic matter by bioturbation.

  20. Organization of marine phenology data in support of planning and conservation in ocean and coastal ecosystems

    USGS Publications Warehouse

    Thomas, Kathryn A.; Fornwall, Mark D.; Weltzin, Jake F.; Griffis, R.B.

    2014-01-01

    Among the many effects of climate change is its influence on the phenology of biota. In marine and coastal ecosystems, phenological shifts have been documented for multiple life forms; however, biological data related to marine species' phenology remain difficult to access and is under-used. We conducted an assessment of potential sources of biological data for marine species and their availability for use in phenological analyses and assessments. Our evaluations showed that data potentially related to understanding marine species' phenology are available through online resources of governmental, academic, and non-governmental organizations, but appropriate datasets are often difficult to discover and access, presenting opportunities for scientific infrastructure improvement. The developing Federal Marine Data Architecture when fully implemented will improve data flow and standardization for marine data within major federal repositories and provide an archival repository for collaborating academic and public data contributors. Another opportunity, largely untapped, is the engagement of citizen scientists in standardized collection of marine phenology data and contribution of these data to established data flows. Use of metadata with marine phenology related keywords could improve discovery and access to appropriate datasets. When data originators choose to self-publish, publication of research datasets with a digital object identifier, linked to metadata, will also improve subsequent discovery and access. Phenological changes in the marine environment will affect human economics, food systems, and recreation. No one source of data will be sufficient to understand these changes. The collective attention of marine data collectors is needed—whether with an agency, an educational institution, or a citizen scientist group—toward adopting the data management processes and standards needed to ensure availability of sufficient and useable marine data to understand

  1. Effects of organic pollution on biological communities of marine biofilm on hard substrata.

    PubMed

    Sanz-Lázaro, C; Fodelianakis, S; Guerrero-Meseguer, L; Marín, A; Karakassis, I

    2015-06-01

    We examined the effect of organic enrichment on diatom and bacterial assemblages of marine epilithic biofilms on two locations in the Mediterranean, one situated in Spain and the other in Greece. Total organic carbon, total organic nitrogen, stable isotopes (δ(13)C and δ(15)N) and chlorophyll a indicated significant incorporation of organic wastes, increased primary production and trophic niche modifications on the biofilms close to the organic enrichment source. In Spain, where the organic load was higher than in Greece, diatom and, to some extent, bacterial assemblages varied following the organic enrichment gradient. The taxonomic richness of diatom and bacterial communities was not influenced by organic enrichment. Classical community parameters showed consistent patterns to organic pollution in both locations, whereas community assemblages were only influenced when organic pollution was greatest. The successional patterns of these communities were similar to other epilithic communities. The modification of community assemblages induced by organic pollution may affect ecological functions. PMID:25752833

  2. Effects of Pollution on Marine Organisms.

    PubMed

    Mearns, Alan J; Reish, Donald J; Oshida, Philip S; Ginn, Thomas; Rempel-Hester, Mary Ann; Arthur, Courtney; Rutherford, Nicolle; Pryor, Rachel

    2015-10-01

    This review covers selected 2014 articles on the biological effects of pollutants and human physical disturbances on marine and estuarine plants, animals, ecosystems and habitats. The review, based largely on journal articles, covers field and laboratory measurement activities (bioaccumulation of contaminants, field assessment surveys, toxicity testing and biomarkers) as well as pollution issues of current interest including endocrine disrupters, emerging contaminants, wastewater discharges, dredging and disposal, etc. Special emphasis is placed on effects of oil spills and marine debris due in part to the 2010 Deepwater Horizon oil blowout in the Gulf of Mexico and the 2011 Japanese tsunami. Several topical areas reviewed in the past (ballast water and ocean acidification) were dropped this year. The focus of this review is on effects, not pollutant fate and transport. There is considerable overlap across subject areas (e.g.some bioaccumulation papers may be cited in other topical categories). Please use keyword searching of the text to locate related but distributed papers. Use this review only as a guide and please consult the original papers before citing them. PMID:26420104

  3. Effects of Pollution on Marine Organisms.

    PubMed

    Mearns, Alan J; Reish, Donald J; Oshida, Philip S; Morrison, Ann Michelle; Rempel-Hester, Mary Ann; Arthur, Courtney; Rutherford, Nicolle; Pryor, Rachel

    2016-10-01

    This review covers selected 2015 articles on the biological effects of pollutants and human physical disturbances on marine and estuarine plants, animals, ecosystems and habitats. The review, based largely on journal articles, covers field and laboratory measurement activities (bioaccumulation of contaminants, field assessment surveys, toxicity testing and biomarkers) as well as pollution issues of current interest including endocrine disrupters, emerging contaminants, wastewater discharges, dredging and disposal, etc. Special emphasis is placed on effects of oil spills and marine debris due largely to the 2010 Deepwater Horizon oil blowout in the Gulf of Mexico. Several topical areas reviewed in the past (ballast water and ocean acidification) were dropped this year. The focus of this review is on effects, not pollutant fate and transport. There is considerable overlap across subject areas (e.g.some bioaccumulation papers may be cited in other topical categories). Please use keyword searching of the text to locate related but distributed papers. Use this review only as a guide and please consult the original papers before citing them. PMID:27620108

  4. Chemoinformatics Approach for Building Molecular Networks from Marine Organisms.

    PubMed

    Karthikeyan, Muthukumarasamy; Nimje, Deepika; Pahujani, Rakhi; Tyagi, Kushal; Bapat, Sanket; Vyas, Renu; Pillai Padmakumar, Krishna

    2015-01-01

    Natural products obtained from marine sources are considered to be a rich and diverse source of potential drugs. In the present work we demonstrate the use of chemoinformatics approach for the design of new molecules inspired by molecules from marine organisms. Accordingly we have assimilated information from two major scientific domains namely chemoinformatics and biodiversity informatics to develop an interactive marine database named MIMMO (Medicinally Important Molecules from Marine Organisms). The database can be queried for species, molecules, scaffolds, drugs, diseases and associated cumulative biological activity spectrum along with links to the literature resources. Molecular informatics analysis of the molecules obtained from MIMMO was performed to study their chemical space. The distinct skeletal features of the biologically active compounds isolated from marine species were identified. Scaffold molecules and species networks were created to identify common scaffolds from marine source and drug space. An analysis of the entire molecular data revealed a unique list of around 2000 molecules from which ten most frequently occurring distinct scaffolds were obtained. PMID:26138570

  5. A description of alkaline phosphatases from marine organisms

    NASA Astrophysics Data System (ADS)

    Tian, Jiyuan; Jia, Hongbing; Yu, Juan

    2015-12-01

    Alkaline phosphatases (APs) are non-specific phosphohydrolases, and they are widely used in clinical diagnostics and biological studies. APs are widespread in nature and exhibit different structural formulations. Based on the diversity of biogenetic sources, APs exhibit temperature-propensity traits, and they are classified as psychrophilic, mesophilic, and thermophilic. In this article, the characteristics of psychrophilic APs from marine organisms were described, accompanied by a simple description of APs from other organisms. This review will facilitate better utilization of marine APs in the biotechnology field.

  6. A description of alkaline phosphatases from marine organisms

    NASA Astrophysics Data System (ADS)

    Tian, Jiyuan; Jia, Hongbing; Yu, Juan

    2016-07-01

    Alkaline phosphatases (APs) are non-specific phosphohydrolases, and they are widely used in clinical diagnostics and biological studies. APs are widespread in nature and exhibit different structural formulations. Based on the diversity of biogenetic sources, APs exhibit temperature-propensity traits, and they are classified as psychrophilic, mesophilic, and thermophilic. In this article, the characteristics of psychrophilic APs from marine organisms were described, accompanied by a simple description of APs from other organisms. This review will facilitate better utilization of marine APs in the biotechnology field.

  7. A review on biosynthesis of nanoparticles by marine organisms.

    PubMed

    Asmathunisha, N; Kathiresan, K

    2013-03-01

    Marine organisms produce remarkable nanofabricated structures in cell wall, shells, pearls and fish bones. Marine microorganisms such as bacteria (E. coli, Pseudomonas sp.), cyanobacteria (Spirulina platensis, Oscillatoria willei, Phormidium tenue), yeasts (Pichia capsulata, Rhodospiridium diobovatum), fungi (Thraustochytrium sp., Penicillium fellutanum, Aspergillus niger), and algae (Navicula atomus, Diadesmis gallica, Stauroneis sp. Sargassum wightii, Fucus vesiculosus) are reported to synthesize inorganic nanoparticles either inside or outside cells. Mangroves (Rhizophora mucronata, Xylocarpus mekongensis), salt marshes (Sesuvium portulacastrum and Suaeda sp.) and sand dune (Citrullus colocynthis) are also capable of synthesizing the nanoparticles, in addition to marine animals such as finfish and sponges. Biosynthesis of nanoparticles may be triggered by several compounds such as carbonyl groups, terpenoids, phenolics, flavonones, amines, amides, proteins, pigments, alkaloids and other reducing agents present in the biological extracts. Marine bio-nanotechnology has a great promise in nanomedicines, food stuff, pharmaceuticals and fabric industries for the future. PMID:23202242

  8. Do organic ligands affect calcite dissolution rates?

    NASA Astrophysics Data System (ADS)

    Oelkers, Eric H.; Golubev, Sergey V.; Pokrovsky, Oleg S.; Bénézeth, Pascale

    2011-04-01

    Steady state Iceland-spar calcite dissolution rates were measured at 25 °C in aqueous solutions containing 0.1 M NaCl and up to 0.05 M dissolved bicarbonate at pH from 7.9 to 9.1 in the presence of 13 distinct dissolved organic ligands in mixed-flow reactors. The organic ligands considered in this study include those most likely to be present in either (1) aquifers at the conditions pertinent to CO 2 sequestration or (2) soil/early diagenetic environments: acetate, phthalate, citrate, EDTA 4-, succinate, D-glucosaminate, L-glutamate, D-gluconate, 2,4-dihydroxybenzoate, 3,4-dihydroxybenzoate, fumarate, malonate, and gallate. Results show that the presence of <0.05 mol/kg of these organic anions changes calcite dissolution rates by less than a factor of 2.5 with the exception of citrate and EDTA 4-. The presence of 0.05 mol/kg citrate and EDTA 4- increases calcite dissolution rates by as much as a factor of 35 and 500, respectively, compared to rates in organic anion-free solutions. Further calcite dissolution experiments were performed in the presence of organic polymers similar to bacterial exudates, cell exopolysaccharides, and analogs of microbial cell envelopes: alginate, lichen extract, humic acid, pectin, and gum xanthan. In no case did the presence of <100 ppm of these organics change calcite dissolution rates by more than a factor of 2.5. Results obtained in this study suggest that the presence of aqueous organic anions negligibly affects calcite forward dissolution rates in most natural environments. Some effect on calcite reactivity may be observed, however, by the presence of organic anions if they change substantially the chemical affinity of the fluid with respect to calcite.

  9. Passive solar system for maintaining and rearing marine organisms

    SciTech Connect

    Yuschak, P.; Richards, F.M.

    1987-04-01

    A solar-heated facility for maintaining and rearing marine organisms is described. Water from a shallow tidal bay is moved by a tide-regulated pumping system into settling tanks for removal of suspended silt and clay, from which the water drains by gravity flow to circular rearing tanks.

  10. Biology, genome organization and evolution of parvoviruses in marine shrimp

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A number of parvoviruses are now know to infect marine shrimp, and these viruses alone or in combination with other viruses have the potential to cause major losses in shrimp aquaculture globally. This review provides a comprehensive overview of the biology, genome organization, gene expression, and...

  11. SOME EFFECTS OF PETROLEUM ON NEARSHORE ALASKAN MARINE ORGANISMS

    EPA Science Inventory

    The overall objective of this project was to better understand the effects of chronic, low-level oil pollution on nearshore Alaskan marine organisms. The bivalve mollusc Macoma balthica accumulated hydrocarbons during 180 days of continuous exposure to Prudhoe Bay crude oil in fl...

  12. Chemotaxis toward phytoplankton drives organic matter partitioning among marine bacteria.

    PubMed

    Smriga, Steven; Fernandez, Vicente I; Mitchell, James G; Stocker, Roman

    2016-02-01

    The microenvironment surrounding individual phytoplankton cells is often rich in dissolved organic matter (DOM), which can attract bacteria by chemotaxis. These "phycospheres" may be prominent sources of resource heterogeneity in the ocean, affecting the growth of bacterial populations and the fate of DOM. However, these effects remain poorly quantified due to a lack of quantitative ecological frameworks. Here, we used video microscopy to dissect with unprecedented resolution the chemotactic accumulation of marine bacteria around individual Chaetoceros affinis diatoms undergoing lysis. The observed spatiotemporal distribution of bacteria was used in a resource utilization model to map the conditions under which competition between different bacterial groups favors chemotaxis. The model predicts that chemotactic, copiotrophic populations outcompete nonmotile, oligotrophic populations during diatom blooms and bloom collapse conditions, resulting in an increase in the ratio of motile to nonmotile cells and in the succession of populations. Partitioning of DOM between the two populations is strongly dependent on the overall concentration of bacteria and the diffusivity of different DOM substances, and within each population, the growth benefit from phycospheres is experienced by only a small fraction of cells. By informing a DOM utilization model with highly resolved behavioral data, the hybrid approach used here represents a new path toward the elusive goal of predicting the consequences of microscale interactions in the ocean. PMID:26802122

  13. Chemotaxis toward phytoplankton drives organic matter partitioning among marine bacteria

    PubMed Central

    Smriga, Steven; Fernandez, Vicente I.; Mitchell, James G.; Stocker, Roman

    2016-01-01

    The microenvironment surrounding individual phytoplankton cells is often rich in dissolved organic matter (DOM), which can attract bacteria by chemotaxis. These “phycospheres” may be prominent sources of resource heterogeneity in the ocean, affecting the growth of bacterial populations and the fate of DOM. However, these effects remain poorly quantified due to a lack of quantitative ecological frameworks. Here, we used video microscopy to dissect with unprecedented resolution the chemotactic accumulation of marine bacteria around individual Chaetoceros affinis diatoms undergoing lysis. The observed spatiotemporal distribution of bacteria was used in a resource utilization model to map the conditions under which competition between different bacterial groups favors chemotaxis. The model predicts that chemotactic, copiotrophic populations outcompete nonmotile, oligotrophic populations during diatom blooms and bloom collapse conditions, resulting in an increase in the ratio of motile to nonmotile cells and in the succession of populations. Partitioning of DOM between the two populations is strongly dependent on the overall concentration of bacteria and the diffusivity of different DOM substances, and within each population, the growth benefit from phycospheres is experienced by only a small fraction of cells. By informing a DOM utilization model with highly resolved behavioral data, the hybrid approach used here represents a new path toward the elusive goal of predicting the consequences of microscale interactions in the ocean. PMID:26802122

  14. Regional signatures in the organic composition of marine aerosol particles

    NASA Astrophysics Data System (ADS)

    Frossard, Amanda A.; Russell, Lynn M.; Keene, William C.; Kieber, David J.; Quinn, Patricia K.; Bates, Timothy S.

    2013-05-01

    Marine aerosol particles play an important role in the earth's radiative balance, yet the sources and composition of the organic fraction remain largely unconstrained. Recent measurements have been made in order to characterize the sources, composition, and concentration of aerosol particles in the marine boundary layer. The organic composition of submicron particles derived from multiple seawater regions have been measured using Fourier Transform Infrared (FTIR) spectroscopy. Cluster analysis of FTIR organic spectra suggest different spectral signatures based on collection location, seawater composition, and ambient conditions. Measurements including non-refractory aerosol composition from a high-resolution time of flight aerosol mass spectrometer (HR-ToF-AMS), seawater composition, and wind speed were used to interpret the cluster results, depending on the availability from each campaign. FTIR spectra of ambient particles are compared to FTIR spectra of primary marine particles generated from model ocean systems to infer the ambient particle production mechanisms and aging processes. Recent measurements used in the comparison include ambient and generated marine aerosol particles measured off the coast of California during CalNex in May and June 2010. Remote ambient marine aerosol particles were collected 100 miles off the coast of Monterey in the eastern Pacific during the EPEACE experiment in July 2011. Ambient and generated marine particles were measured in two different seawater types during WACS 2012 including colder, more productive water off the coast of the northeastern United States and warmer, oligotrophic water in the Sargasso Sea. These particles are also compared with those measured in the southeastern Pacific during VOCALS and the north Atlantic during ICEALOT.

  15. Bioavailability of sediment-bound contaminants to marine organisms

    SciTech Connect

    Brown, B. |

    1993-09-01

    The bioavailability of sediment-bound contaminants to marine organisms indicates that there exists a potential for transfer of these contaminants through marine food webs to commercial fisheries products consumed by humans. However, there has been relatively little effort to combine and synthesize data on chemical/biological interactions between benthic animals and seagrasses and the sediments in which they reside on the one hand, and on the chemistry of bioaccumulation on the other. This report provides a conceptual basis for an approach to bioavailability and biomagnification of sediment-bound contaminants that reviews biological and chemical approaches.

  16. An Update on 2,5-Diketopiperazines from Marine Organisms

    PubMed Central

    Huang, Ri-Ming; Yi, Xiang-Xi; Zhou, Yuying; Su, Xiangdong; Peng, Yan; Gao, Cheng-Hai

    2014-01-01

    2,5-Diketopiperazines (2,5-DKPs) are an important category of structurally diverse cyclic dipeptides with prominent biological properties. These 2,5-DKPs have been obtained from a variety of natural resources, including marine organisms. Because of the increasing numbers and biological importance of these compounds, this review covers 90 marine originated 2,5-DKPs that were reported from 2009 to the first half-year of 2014. The review will focus on the structure characterizations, biological properties and proposed biosynthetic processes of these compounds. PMID:25532564

  17. Adhesion of marine fouling organisms on hydrophilic and amphiphilic polysaccharides.

    PubMed

    Bauer, Stella; Arpa-Sancet, Maria Pilar; Finlay, John A; Callow, Maureen E; Callow, James A; Rosenhahn, Axel

    2013-03-26

    Polysaccharides are a promising material for nonfouling surfaces because their chemical composition makes them highly hydrophilic and able to form water-storing hydrogels. Here we investigated the nonfouling properties of hyaluronic acid (HA) and chondroitin sulfate (CS) against marine fouling organisms. Additionally, the free carboxyl groups of HA and CS were postmodified with the hydrophobic trifluoroethylamine (TFEA) to block free carboxyl groups and render the surfaces amphiphilic. All coatings were tested with respect to their protein resistance and against settlement and adhesion of different marine fouling species. Both the settlement and adhesion strength of a marine bacterium (Cobetia marina), zoospores of the seaweed Ulva linza, and cells of a diatom (Navicula incerta) were reduced compared to glass control surfaces. In most cases, TFEA capping increased or maintained the performance of the HA coatings, whereas for the very well performing CS coatings the antifouling performance was reduced after capping. PMID:23425225

  18. FACTORS AFFECTING SENSITIVITY OF CHEMICAL AND ECOLOGICAL RESPONSES OF MARINE EMBAYMEMTS TO NITROGEN LOADING

    EPA Science Inventory

    This paper summarizes an ongoing examination of the primary factors that affect sensitivity of marine embayment responses to nitrogen loading. Included is a discussion of two methods for using these factors: classification of embayments into discrete sensitivity classes and norma...

  19. Analysis of the Organic Content of Marine Aerosols with X-ray Spectroscopy

    NASA Astrophysics Data System (ADS)

    Pham, D.; OBrien, R. E.; Fraund, M.; Laskina, O.; Alpert, P. A.; Prather, K. A.; Knopf, D. A.; Grassian, V. H.; Moffet, R.

    2014-12-01

    The ocean is a major global source of aerosols and the seawater from which they are derived is a complex mixture of organic molecules from organisms including phytoplankton, bacteria, and viruses. Marine aerosols consist of any combination of these components and in different mixing states. The mixing state affects absorption and scattering efficiency as well as their ability to uptake water and form ice. Therefore, there is a need to spatially resolve the chemical composition of individual marine aerosols in order to study their potential effects on the climate. Scanning Transmission X-ray Microscopy coupled with Near Edge X-ray Absorption Fine Structure spectroscopy (SXTM-NEXAFS) gives both spatial resolution as well as the sensitivity to molecular transitions that is necessary to correlate a position on an aerosol with a functional group or inorganic constituent. The morphology, mixing state, and chemical composition from STXM-NEXAFS can be used in conjunction with collocated measurements (light scattering, ice nucleation, etc.) to correlate the spatially resolved chemical composition of aerosols with their physical properties. The goal of this project is to determine if there is a difference in the organic fraction between particles with clearly different morphology and mixing states. Three major classes of marine aerosols have been classified as sea salt, marine gels, and cell fragments. Sea salt is classified by having an inorganic core consisting of NaCl and a thin layer of organic coating on the outside. Marine gels consist of organic material in the form of lipids, polysaccharides, and proteins distributed throughout the aerosol alongside inorganic compounds, such as Ca2+, Mg2+, and K+, that help to stabilize the negative charge of the organic material. Cell fragments include fragments from phytoplankton and bacteria. Efforts are currently underway to quantitatively evaluate differences in NEXAFS spectra for these particle types using nonlinear least

  20. Marine Vibrio Species Produce the Volatile Organic Compound Acetone

    PubMed Central

    Nemecek-Marshall, M.; Wojciechowski, C.; Kuzma, J.; Silver, G. M.; Fall, R.

    1995-01-01

    While screening aerobic, heterotrophic marine bacteria for production of volatile organic compounds, we found that a group of isolates produced substantial amounts of acetone. Acetone production was confirmed by gas chromatography, gas chromatography-mass spectrometry, and high-performance liquid chromatography. The major acetone producers were identified as nonclinical Vibrio species. Acetone production was maximal in the stationary phase of growth and was stimulated by addition of l-leucine but not the other common amino acids, suggesting that leucine degradation leads to acetone formation. Acetone production by marine vibrios may contribute to the dissolved organic carbon associated with phytoplankton, and some of the acetone produced may be volatilized to the atmosphere. PMID:16534920

  1. Toxicity, bioaccumulation, and biotransformation of silver nanoparticles in marine organisms.

    PubMed

    Wang, Huanhua; Ho, Kay T; Scheckel, Kirk G; Wu, Fengchang; Cantwell, Mark G; Katz, David R; Horowitz, Doranne Borsay; Boothman, Warren S; Burgess, Robert M

    2014-12-01

    The toxicity, bioaccumulation, and biotransformation of citrate and polyvinylpyrrolidone (PVP) coated silver nanoparticles (NPs) (AgNP-citrate and AgNP-PVP) in marine organisms via marine sediment exposure was investigated. Results from 7-d sediment toxicity tests indicate that AgNP-citrate and AgNP-PVP did not exhibit toxicity to the amphipod (Ampelisca abdita) and mysid (Americamysis bahia) at ≤75 mg/kg dry wt. A 28-d bioaccumulation study showed that Ag was significantly accumulated in the marine polychaete Nereis virens (N. virens) in the AgNP-citrate, AgNP-PVP and a conventional salt (AgNO3) treatments. Synchrotron X-ray absorption spectroscopy (XAS) results showed the distribution of Ag species in marine sediments amended with AgNP-citrate, AgNP-PVP, and AgNO3 was AgCl (50–65%) > Ag2S (32–42%) > Ag metal (Ag0) (3–11%). In N virens, AgCl (25–59%) and Ag2S (10–31%) generally decreased and, Ag metal (32–44%) increased, relative to the sediments. The patterns of speciation in the worm were different depending upon the coating of the AgNP and both types of AgNPs were different than the AgNO3 salt. These results show that the AgNP surface capping agents influenced Ag uptake, biotransformation, and/or excretion. To our knowledge, this is the first demonstration of the bioaccumulation and speciation of AgNPs in a marine organism (N. virens). PMID:25369427

  2. Estimating soil organic carbon input to marine sediments (Invited)

    NASA Astrophysics Data System (ADS)

    Weijers, J.; Schouten, S.; Schefuss, E.; Schneider, R. R.; Sinninghe Damsté, J. S.

    2009-12-01

    Estimating (past) input of terrestrial organic carbon (OC) in marine sediments is complicated due to the heterogeneity of the OC. Two end member mixing models based on different parameters often give different results. This is in part due to the fact that terrestrial OC is only represented by one end member (often representing plant OC) where it in fact consists of two OC pools, i.e., plant and soil OC. The branched vs. isoprenoid tetraether (BIT) index is a new proxy for soil OC input, with the branched tetraether membrane lipids being derived from bacteria living in soils and peat bogs [1]. We have now applied this molecular proxy in a three end member mixing model, in conjunction with d13C and C/N values of total organic matter, in a marine sediment core from the Congo deep sea fan to estimate inputs of marine, soil and plant OC to this location over the last deglaciation. Results indicate an average of 45% of the OC being of soil origin, pointing to the importance of soil OC and the need for proper characterization of this fraction. [1] Hopmans et al. (2004) EPSL 224, 107-116. Figure 1: Composition of the organic carbon input to the Congo deep sea fan over the last 20 thousand years. YD = Younger Dryas; LGM = Last Glacial Maximum

  3. Biomass Yield Efficiency of the Marine Anammox Bacterium, “Candidatus Scalindua sp.,” is Affected by Salinity

    PubMed Central

    Awata, Takanori; Kindaichi, Tomonori; Ozaki, Noriatsu; Ohashi, Akiyoshi

    2015-01-01

    The growth rate and biomass yield efficiency of anaerobic ammonium oxidation (anammox) bacteria are markedly lower than those of most other autotrophic bacteria. Among the anammox bacterial genera, the growth rate and biomass yield of the marine anammox bacterium “Candidatus Scalindua sp.” is still lower than those of other anammox bacteria enriched from freshwater environments. The activity and growth of marine anammox bacteria are generally considered to be affected by the presence of salinity and organic compounds. Therefore, in the present study, the effects of salinity and volatile fatty acids (VFAs) on the anammox activity, inorganic carbon uptake, and biomass yield efficiency of “Ca. Scalindua sp.” enriched from the marine sediments of Hiroshima Bay, Japan, were investigated in batch experiments. Differences in VFA concentrations (0–10 mM) were observed under varying salinities (0.5%–4%). Anammox activity was high at 0.5%–3.5% salinity, but was 30% lower at 4% salinity. In addition, carbon uptake was higher at 1.5%–3.5% salinity. The results of the present study clearly demonstrated that the biomass yield efficiency of the marine anammox bacterium “Ca. Scalindua sp.” was significantly affected by salinity. On the other hand, the presence of VFAs up to 10 mM did not affect anammox activity, carbon uptake, or biomass yield efficiency. PMID:25740428

  4. Marine organics effect on sea-spray light scattering

    NASA Astrophysics Data System (ADS)

    Vaishya, Aditya; Ovadnevaite, Jurgita; Bialek, Jakub; Jennings, S. G.; Ceburnis, Darius; O'Dowd, Colin

    2013-05-01

    Primary-produced sea-spray is typically composed of sea-salt, but in biologically-active regions, the spray can become enriched with organic matter which reduces hygroscopicity of sea-spray, thereby having a potential impact on aerosol scattering. This study shows that scattering enhancement of marine aerosol, as a function of increasing relative humidity, is reduced when enriched with organics whose results are used to develop a new hygroscopicity growth-factor parameterization for sea-spray enriched in organic matter. The parameterization reveals a dual state which flips from high-hygroscopicity and high-scattering enhancement to low-hygroscopicity and low-scattering enhancement as the organic volume fraction increases from below ˜ 0.55 to above ˜ 0.55. In terms of organic enrichment, the effect on Top of Atmosphere (TOA) direct radiative forcing (ΔF) is to reduce the cooling contribution of sea-spray by ˜ 5.5 times compared to pure sea-salt spray. The results presented here highlight a significant coupling between the marine biosphere and the direct radiative budget through alteration of sea-spray chemical composition, potentially leading to accelerated global warming should biological activity increase with future projected temperature increases.

  5. Infectious Diseases Affect Marine Fisheries and Aquaculture Economics

    NASA Astrophysics Data System (ADS)

    Lafferty, Kevin D.; Harvell, C. Drew; Conrad, Jon M.; Friedman, Carolyn S.; Kent, Michael L.; Kuris, Armand M.; Powell, Eric N.; Rondeau, Daniel; Saksida, Sonja M.

    2015-01-01

    Seafood is a growing part of the economy, but its economic value is diminished by marine diseases. Infectious diseases are common in the ocean, and here we tabulate 67 examples that can reduce commercial species' growth and survivorship or decrease seafood quality. These impacts seem most problematic in the stressful and crowded conditions of aquaculture, which increasingly dominates seafood production as wild fishery production plateaus. For instance, marine diseases of farmed oysters, shrimp, abalone, and various fishes, particularly Atlantic salmon, cost billions of dollars each year. In comparison, it is often difficult to accurately estimate disease impacts on wild populations, especially those of pelagic and subtidal species. Farmed species often receive infectious diseases from wild species and can, in turn, export infectious agents to wild species. However, the impact of disease export on wild fisheries is controversial because there are few quantitative data demonstrating that wild species near farms suffer more from infectious diseases than those in other areas. The movement of exotic infectious agents to new areas continues to be the greatest concern.

  6. Infectious diseases affect marine fisheries and aquaculture economics

    USGS Publications Warehouse

    Lafferty, Kevin D.; Harvell, C. Drew; Conrad, Jon M.; Friedman, Carolyn S.; Kent, Michael L.; Kuris, Armand M.; Powell, Eric N.; Rondeau, Daniel; Saksida, Sonja M.

    2015-01-01

    Seafood is a growing part of the economy, but its economic value is diminished by marine diseases. Infectious diseases are common in the ocean, and here we tabulate 67 examples that can reduce commercial species' growth and survivorship or decrease seafood quality. These impacts seem most problematic in the stressful and crowded conditions of aquaculture, which increasingly dominates seafood production as wild fishery production plateaus. For instance, marine diseases of farmed oysters, shrimp, abalone, and various fishes, particularly Atlantic salmon, cost billions of dollars each year. In comparison, it is often difficult to accurately estimate disease impacts on wild populations, especially those of pelagic and subtidal species. Farmed species often receive infectious diseases from wild species and can, in turn, export infectious agents to wild species. However, the impact of disease export on wild fisheries is controversial because there are few quantitative data demonstrating that wild species near farms suffer more from infectious diseases than those in other areas. The movement of exotic infectious agents to new areas continues to be the greatest concern.

  7. Anti-photoaging and Photoprotective Compounds Derived from Marine Organisms

    PubMed Central

    Pallela, Ramjee; Na-Young, Yoon; Kim, Se-Kwon

    2010-01-01

    Marine organisms form a prominent component of the oceanic population, which significantly contribute in the production of cosmeceutical and pharmaceutical molecules with biologically efficient moieties. In addition to the molecules of various biological activities like anti-bacterial, anti-cancerous, anti-inflammatory and anti-oxidative etc., these organisms also produce potential photoprotective or anti-photoaging agents, which are attracting present day researchers. Continuous exposure to UV irradiation (both UV-A and UV-B) leads to the skin cancer and other photoaging complications, which are typically mediated by the reactive oxygen species (ROS), generated in the oxidative pathways. Many of the anti-oxidative and anti-photoaging compounds have been identified previously, which work efficiently against photodamage of the skin. Recently, marine originated photoprotective or anti-photoaging behavior was observed in the methanol extracts of Corallina pilulifera (CPM). These extracts were found to exert potent antioxidant activity and protective effect on UV-A-induced oxidative stress in human dermal fibroblast (HDF) cells by protecting DNA and also by inhibiting matrix metalloproteinases (MMPs), a key component in photoaging of the skin due to exposure to UV-A. The present review depicts various other photoprotective compounds from algae and other marine sources for further elaborative research and their probable use in cosmeceutical and pharmaceutical industries. PMID:20479974

  8. Reticulate Evolution and Marine Organisms: The Final Frontier?

    PubMed Central

    Arnold, Michael L.; Fogarty, Nicole D.

    2009-01-01

    The role that reticulate evolution (i.e., via lateral transfer, viral recombination and/or introgressive hybridization) has played in the origin and adaptation of individual taxa and even entire clades continues to be tested for all domains of life. Though falsified for some groups, the hypothesis of divergence in the face of gene flow is becoming accepted as a major facilitator of evolutionary change for many microorganisms, plants and animals. Yet, the effect of reticulate evolutionary change in certain assemblages has been doubted, either due to an actual dearth of genetic exchange among the lineages belonging to these clades or because of a lack of appropriate data to test alternative hypotheses. Marine organisms represent such an assemblage. In the past half-century, some evolutionary biologists interested in the origin and trajectory of marine organisms, particularly animals, have posited that horizontal transfer, introgression and hybrid speciation have been rare. In this review, we provide examples of such genetic exchange that have come to light largely as a result of analyses of molecular markers. Comparisons among these markers and between these loci and morphological characters have provided numerous examples of marine microorganisms, plants and animals that possess the signature of mosaic genomes. PMID:19865522

  9. Differential response of marine organisms to certain metal and agrichemical pollutants

    SciTech Connect

    Lee, H.H.; Xu, C.H.

    1984-10-01

    Oocyte maturation of the starfish, fertilization and embryogenesis of sea urchins, and the development of amphioxus and brine shrimps were used to assay the effects of several common metals and agrichemicals frequently found in marine environments. While brine shrimp embryos were tolerant to metals and agrichemicals used here, sea urchins and amphioxus showed a differential response to the common metal pollutants. Starfish oocyte maturation process was affected by agrichemicals. The results show that no one single organism, or its embryonic form, or a particular stage of development, can be used as the indicator for a particular pollutant. However, the use of lower forms of marine organisms can be useful collectively for environmental investigations and the management of waste disposal.

  10. cis and trans factors affecting Mos1 mariner evolution and transposition in vitro, and its potential for functional genomics.

    PubMed

    Tosi, L R; Beverley, S M

    2000-02-01

    Mos1 and other mariner / Tc1 transposons move horizon-tally during evolution, and when transplanted into heterologous species can transpose in organisms ranging from prokaryotes to protozoans and vertebrates. To further develop the Drosophila Mos1 mariner system as a genetic tool and to probe mechanisms affecting the regulation of transposition activity, we developed an in vitro system for Mos1 transposition using purified transposase and selectable Mos1 derivatives. Transposition frequencies of nearly 10(-3)/target DNA molecule were obtained, and insertions occurred at TA dinucleotides with little other sequence specificity. Mos1 elements containing only the 28 bp terminal inverted repeats were inactive in vitro, while elements containing a few additional internal bases were fully active, establishing the minimal cis -acting requirements for transposition. With increasing transposase the transposition frequency increased to a plateau value, in contrast to the predictions of the protein over-expression inhibition model and to that found recently with a reconstructed Himar1 transposase. This difference between the 'natural' Mos1 and 'reconstructed' Himar1 transposases suggests an evolutionary path for down-regulation of mariner transposition following its introduction into a naïve population. The establishment of the cis and trans requirements for optimal mariner transposition in vitro provides key data for the creation of vectors for in vitro mutagenesis, and will facilitate the development of in vivo systems for mariner transposition. PMID:10637331

  11. Effects of Marine Toxins on the Reproduction and Early Stages Development of Aquatic Organisms

    PubMed Central

    Vasconcelos, Vítor; Azevedo, Joana; Silva, Marisa; Ramos, Vítor

    2010-01-01

    Marine organisms, and specially phytoplankton species, are able to produce a diverse array of toxic compounds that are not yet fully understood in terms of their main targets and biological function. Toxins such as saxitoxins, tetrodotoxin, palytoxin, nodularin, okadaic acid, domoic acid, may be produced in large amounts by dinoflagellates, cyanobacteria, bacteria and diatoms and accumulate in vectors that transfer the toxin along food chains. These may affect top predator organisms, including human populations, leading in some cases to death. Nevertheless, these toxins may also affect the reproduction of aquatic organisms that may be in contact with the toxins, either by decreasing the amount or quality of gametes or by affecting embryonic development. Adults of some species may be insensitive to toxins but early stages are more prone to intoxication because they lack effective enzymatic systems to detoxify the toxins and are more exposed to the toxins due to a higher metabolic growth rate. In this paper we review the current knowledge on the effects of some of the most common marine toxins on the reproduction and development of early stages of some organisms. PMID:20161971

  12. The chronic toxicity of molybdate to marine organisms. I. Generating reliable effects data.

    PubMed

    Heijerick, D G; Regoli, L; Stubblefield, W

    2012-07-15

    A scientific research program was initiated by the International Molybdenum Association (IMOA) which addressed identified gaps in the environmental toxicity data for the molybdate ion (MoO(4)(2-)). These gaps were previously identified during the preparation of EU-REACH-dossiers for different molybdenum compounds (European Union regulation on Registration, Evaluation, Authorization and Restriction of Chemical substances; EC, 2006). Evaluation of the open literature identified few reliable marine ecotoxicological data that could be used for deriving a Predicted No-Effect Concentration (PNEC) for the marine environment. Rather than calculating a PNEC(marine) using the assessment factor methodology on a combined freshwater/marine dataset, IMOA decided to generate sufficient reliable marine chronic data to permit derivation of a PNEC by means of the more scientifically robust species sensitivity distribution (SSD) approach (also called the statistical extrapolation approach). Nine test species were chronically exposed to molybdate (added as sodium molybdate dihydrate, Na(2)MoO(4)·2H(2)O) according to published standard testing guidelines that are acceptable for a broad range of regulatory purposes. The selected test organisms were representative for typical marine trophic levels: micro-algae/diatom (Phaeodactylum tricornutum, Dunaliella tertiolecta), macro-alga (Ceramium tenuicorne), mysids (Americamysis bahia), copepod (Acartia tonsa), fish (Cyprinodon variegatus), echinoderms (Dendraster exentricus, Strongylocentrotus purpuratus) and molluscs (Mytilus edulis, Crassostrea gigas). Available NOEC/EC(10) levels ranged between 4.4 mg Mo/L (blue mussel M. edulis) and 1174 mg Mo/L (oyster C. gigas). Using all available reliable marine chronic effects data that are currently available, a HC(5,50%) (median hazardous concentration affecting 5% of the species) of 5.74(mg Mo)/L was derived with the statistical extrapolation approach, a value that can be used for national and

  13. The Prevalence of Specific Ecologies in Marine Organisms with Relation to Environmental Factors

    NASA Astrophysics Data System (ADS)

    Kothari, S.; Gao, Y.; Heim, N. A.; Payne, J.

    2015-12-01

    The environment is constantly changing; in recent times, the issue of global warming in particular has raised concerns about ecosystems. Marine organisms are just one type of organism affected by environmental changes; by studying how changes in the environment in the past have affected evolution, we can make predictions for the future. Drastic environmental changes have occurred since the beginning of the Cambrian (541 Ma), as have changes in the ecologies of different phyla and marine organisms as a whole. Organisms must adapt to changing environments, and by analyzing the correlations between the two variables, we can find out which environmental factors play roles in the prevalences of characteristics in populations. Distinctive patterns in the originations and extinctions of ecologies in large fractions of a population and the changes in environmental conditions are visible through careful analysis. We have found, through correlation tests between factors, that statistically significant correlations (p-values < 5%) do exist between certain ecologies (including motility, feeding habits, and tiering) and environmental factors. In particular, these include changes in sea level and carbon dioxide levels, two of the biggest effects of global warming that is currently occurring. Research into these factors is important for our understanding of the changing world of today.

  14. Cancer History May Affect Survival After Organ Transplant

    MedlinePlus

    ... nih.gov/medlineplus/news/fullstory_158468.html Cancer History May Affect Survival After Organ Transplant Study also ... death compared to organ recipients with no cancer history, new research suggests. The findings indicate that transplant ...

  15. Integrated ecotoxicological assessment of marine sediments affected by land-based marine fish farm effluents: physicochemical, acute toxicity and benthic community analyses.

    PubMed

    Silva, C; Yáñez, E; Martín-Díaz, M L; Riba, I; DelValls, T A

    2013-08-01

    An integrated ecotoxicological assessment of marine sediments affected by land-based marine fish farm effluents was developed using physicochemical and benthic community structure analyses and standardised laboratory bioassays with bacteria (Vibrio fischeri), amphipods (Ampelisca brevicornis) and sea urchin larvae (Paracentrotus lividus). Intertidal sediment samples were collected at five sites of the Rio San Pedro (RSP) creek, from the aquaculture effluent to a clean site. The effective concentration (EC50) from bacterial bioluminescence and A. brevicornis survival on whole sediments and P. lividus larval developmental success on sediment elutriates were assessed. Numbers of species, abundance and Shannon diversity were the biodiversity indicators measured in benthic fauna of sediment samples. In parallel, redox potential, pH, organic matter and metal levels (Cd, Cu, Ni, Pb and Zn) in the sediment and dissolved oxygen in the interstitial water were measured in situ. Water and sediment physicochemical analysis revealed the exhibition of a spatial gradient in the RSP, evidenced by hypoxia/anoxia, reduced and acidic conditions, high organic enrichment and metal concentrations at the most contaminated sites. Whereas, the benthic fauna biodiversity decreased the bioassays depicted decreases in EC50, A. brevicornis survival, P. lividus larval success at sampling sites closer to the studied fish farms. This study demonstrates that the sediments polluted by fish farm effluents may lead to alterations of the biodiversity of the exposed organisms. PMID:23681739

  16. The thermodynamic and kinetic impacts of organics on marine aerosols

    NASA Astrophysics Data System (ADS)

    Crahan, Kathleen

    Organics can change the manner in which aerosols scatter radiation directly as hydrated aerosols and indirectly as in-cloud activated aerosols, through changing the solution activity, the surface tension, and the accommodation coefficient of the hydrated aerosol. This work explores the kinetic and thermodynamic impacts of the organic component of marine aerosols through data collected over four field campaigns and through several models used to reproduce observations. The Rough Evaporation Duct (RED) project was conducted in the summer of 2001 off the coast of Oahu using the Twin Otter Aircraft and the Floating Instrument Platform research platform for data collection. The Cloud-Aerosol Research in the Marine Atmosphere (CARMA) campaigns were conducted over three summers (2002, 2004, 2005) off the coast of Monterey, California. During the CARMA campaigns, a thick, moist, stratocumulus deck was present during most days, and the Twin Otter Aircraft was the primary research platform used to collect data. However, the research goals and exact instrumentation onboard the Twin Otter varied from campaign to campaign, and each data set was analyzed individually. Data collected from CARMA I were used to explore the mechanism of oxalic acid production in cloud droplets. Oxalate was observed in the clouds in excess to below cloud concentrations by an average of 0.11 mug m-3, suggesting an in-cloud production. The tentative identification in cloud water of an intermediate species in the aqueous oxalate production mechanism lends further support to an in-cloud oxalate source. The data sets collected during the RED campaign and the CARMA II and CARMA III campaigns were used to investigate the impact of aerosol chemical speciation on aerosol hygroscopic behavior. Several models were used to correlate the observations in the subsaturated regime to theory including an explicit thermodynamic model, simple Kohler theory, and a parameterization of the solution activity. These models

  17. Signal Transducers and Activators of Transcription (STAT) Regulatory Networks in Marine Organisms: From Physiological Observations towards Marine Drug Discovery

    PubMed Central

    Lee, Jin-Young; Orlikova, Barbora; Diederich, Marc

    2015-01-01

    Part of our ocean’s richness comes from its extensive history of supporting life, resulting in a highly diverse ecological system. To date, over 250,000 species of marine organisms have been identified, but it is speculated that the actual number of marine species exceeds one million, including several hundreds of millions of species of marine microorganisms. Past studies suggest that approximately 70% of all deep-sea microorganisms, gorgonians, and sea sponges produce secondary metabolites with anti-cancer activities. Recently, novel FDA-approved drugs derived from marine sponges have been shown to reduce metastatic breast cancer, malignant lymphoma, and Hodgkin’s disease. Despite the fact that many marine natural products have been shown to possess a good inhibition potential against most of the cancer-related cell signaling pathways, only a few marine natural products have been shown to target JAK/STAT signaling. In the present paper, we describe the JAK/STAT signaling pathways found in marine organisms, before elaborating on the recent advances in the field of STAT inhibition by marine natural products and the potential application in anti-cancer drug discovery. PMID:26262624

  18. Signal Transducers and Activators of Transcription (STAT) Regulatory Networks in Marine Organisms: From Physiological Observations towards Marine Drug Discovery.

    PubMed

    Lee, Jin-Young; Orlikova, Barbora; Diederich, Marc

    2015-08-01

    Part of our ocean's richness comes from its extensive history of supporting life, resulting in a highly diverse ecological system. To date, over 250,000 species of marine organisms have been identified, but it is speculated that the actual number of marine species exceeds one million, including several hundreds of millions of species of marine microorganisms. Past studies suggest that approximately 70% of all deep-sea microorganisms, gorgonians, and sea sponges produce secondary metabolites with anti-cancer activities. Recently, novel FDA-approved drugs derived from marine sponges have been shown to reduce metastatic breast cancer, malignant lymphoma, and Hodgkin's disease. Despite the fact that many marine natural products have been shown to possess a good inhibition potential against most of the cancer-related cell signaling pathways, only a few marine natural products have been shown to target JAK/STAT signaling. In the present paper, we describe the JAK/STAT signaling pathways found in marine organisms, before elaborating on the recent advances in the field of STAT inhibition by marine natural products and the potential application in anti-cancer drug discovery. PMID:26262624

  19. Does proximity to urban centres affect the dietary regime of marine benthic filter feeders?

    NASA Astrophysics Data System (ADS)

    Puccinelli, Eleonora; Noyon, Margaux; McQuaid, Christopher D.

    2016-02-01

    Threats to marine ecosystems include habitat destruction and degradation of water quality, resulting from land- and ocean-based human activities. Anthropogenic input causing modification of water quality, can affect primary productivity and thus food availability and quality for higher trophic levels. This is especially important for sedentary benthic intertidal communities, which rely on local food availability. We investigated the effect of urbanization on the dietary regime of four species of intertidal filter feeders (three barnacles and one mussel) at sites close to high-density cities and at sites far from heavily urbanized areas using fatty acid and stable isotope techniques. δ15N was significantly higher at urbanized sites compared to their corresponding control sites for all species with few exceptions, while no effect on δ13C was recorded. Barnacle fatty acid profiles were not affected by cities, while mussels from sites close to cities had fatty acid signatures with a higher proportion of polyunsaturated fatty acids (PUFA). We suggest that the enrichment in δ15N at urbanised sites reflects the influence of anthropogenically derived nitrogen directly linked to wastewater input from domestic and industrial sewage. Linked to this, the high proportion of PUFA in mussels at urbanized sites may reflect the influence of increased nitrogen concentrations on primary production and enhanced growth of large phytoplankton cells. The results indicate that anthropogenic effects can strongly influence the diets of benthic organisms, but these effects differ among taxa. Changes in the diet of such habitat forming species can affect their fitness and survival with potential effects on the populations associated with them.

  20. Acute toxicity of saline produced waters to marine organisms

    SciTech Connect

    Pillard, D.A.; Evans, J.M.; DuFresne, D.L.

    1996-11-01

    Produced waters from oil and gas drilling operations are typically very saline, and may cause acute toxicity to marine organisms due imbalances as well as to an excess or deficiency of to osmotic specific common ions. In order to better understand the relationship between toxicity and ion concentration, laboratory toxicity tests were conducted using mysid shrimp (Mysidopsis bahia), sheepshead minnow, (Cyprinodon variegatus), and inland silvemide (Menidia beryllina). For each species the ionic concentration of standard laboratory water was proportionally increased or decreased to produce test solutions with a range of salinities. Individual ions (sodium, potassium, calcium, magnesium, strontium, chloride, bromide, sulfate, bicarbonate, and borate) were also manipulated to examine individual ion toxicity. Organisms were exposed for 48 hours. The three test species differ in their tolerance of salinity. Mysid shrimp show a marked decrease in survival at salinities less than approximately 5 ppt. Both fish species tolerated low salinity water, however, silversides were less tolerant of saline waters (salinity greater than 40 ppt). There were also significant differences in the responses of the organisms to different ions. The results show that salinity of the test solution may play an important role in the responses of the organisms to produced water effluent. Predictable toxicity/ion relationships developed in this study can be used to estimate whether toxicity in produced water is a result of common ions, salinity, or some other unknown toxicant.

  1. Factors Affecting Morbidity in Solid Organ Injuries

    PubMed Central

    Baygeldi, Serdar; Karakose, Oktay; Özcelik, Kazım Caglar; Pülat, Hüseyin; Damar, Sedat; Eken, Hüseyin; Zihni, İsmail; Çalta, Alpaslan Fedai; Baç, Bilsel

    2016-01-01

    Background and Aim. The aim of this study was to investigate the effects of demographic characteristics, biochemical parameters, amount of blood transfusion, and trauma scores on morbidity in patients with solid organ injury following trauma. Material and Method. One hundred nine patients with solid organ injury due to abdominal trauma during January 2005 and October 2015 were examined retrospectively in the General Surgery Department of Dicle University Medical Faculty. Patients' age, gender, trauma interval time, vital status (heart rate, arterial tension, and respiratory rate), hematocrit (HCT) value, serum area aminotransferase (ALT) and aspartate aminotransferase (AST) values, presence of free abdominal fluid in USG, trauma mechanism, extra-abdominal system injuries, injured solid organs and their number, degree of injury in abdominal CT, number of blood transfusions, duration of hospital stay, time of operation (for those undergoing operation), trauma scores (ISS, RTS, Glasgow coma scale, and TRISS), and causes of morbidity and mortality were examined. In posttraumatic follow-up period, intra-abdominal hematoma infection, emboli, catheter infection, and deep vein thrombosis were monitored as factors of morbidity. Results. One hundred nine patients were followed up and treated due to isolated solid organ injury following abdominal trauma. There were 81 males (74.3%) and 28 females (25.7%), and the mean age was 37.6 ± 18.28 (15–78) years. When examining the mechanism of abdominal trauma in patients, the following results were obtained: 58 (53.3%) traffic accidents (22 out-vehicle and 36 in-vehicle), 27 (24.7%) falling from a height, 14 (12.9%) assaults, 5 (4.5%) sharp object injuries, and 5 (4.5%) gunshot injuries. When evaluating 69 liver injuries scaled by CT the following was detected: 14 (20.3%) of grade I, 32 (46.4%) of grade II, 22 (31.8%) of grade III, and 1 (1.5%) of grade IV. In 63 spleen injuries scaled by CT the following was present: grade I in

  2. Factors Affecting Morbidity in Solid Organ Injuries.

    PubMed

    Baygeldi, Serdar; Karakose, Oktay; Özcelik, Kazım Caglar; Pülat, Hüseyin; Damar, Sedat; Eken, Hüseyin; Zihni, İsmail; Çalta, Alpaslan Fedai; Baç, Bilsel

    2016-01-01

    Background and Aim. The aim of this study was to investigate the effects of demographic characteristics, biochemical parameters, amount of blood transfusion, and trauma scores on morbidity in patients with solid organ injury following trauma. Material and Method. One hundred nine patients with solid organ injury due to abdominal trauma during January 2005 and October 2015 were examined retrospectively in the General Surgery Department of Dicle University Medical Faculty. Patients' age, gender, trauma interval time, vital status (heart rate, arterial tension, and respiratory rate), hematocrit (HCT) value, serum area aminotransferase (ALT) and aspartate aminotransferase (AST) values, presence of free abdominal fluid in USG, trauma mechanism, extra-abdominal system injuries, injured solid organs and their number, degree of injury in abdominal CT, number of blood transfusions, duration of hospital stay, time of operation (for those undergoing operation), trauma scores (ISS, RTS, Glasgow coma scale, and TRISS), and causes of morbidity and mortality were examined. In posttraumatic follow-up period, intra-abdominal hematoma infection, emboli, catheter infection, and deep vein thrombosis were monitored as factors of morbidity. Results. One hundred nine patients were followed up and treated due to isolated solid organ injury following abdominal trauma. There were 81 males (74.3%) and 28 females (25.7%), and the mean age was 37.6 ± 18.28 (15-78) years. When examining the mechanism of abdominal trauma in patients, the following results were obtained: 58 (53.3%) traffic accidents (22 out-vehicle and 36 in-vehicle), 27 (24.7%) falling from a height, 14 (12.9%) assaults, 5 (4.5%) sharp object injuries, and 5 (4.5%) gunshot injuries. When evaluating 69 liver injuries scaled by CT the following was detected: 14 (20.3%) of grade I, 32 (46.4%) of grade II, 22 (31.8%) of grade III, and 1 (1.5%) of grade IV. In 63 spleen injuries scaled by CT the following was present: grade I in 21

  3. The post-Paleozoic chronology and mechanism of 13C depletion in primary marine organic matter

    NASA Technical Reports Server (NTRS)

    Popp, B. N.; Takigiku, R.; Hayes, J. M.; Louda, J. W.; Baker, E. W.

    1989-01-01

    Carbon-isotopic compositions of geoporphyrins have been measured from marine sediments of Mesozoic and Cenozoic age in order to elucidate the timing and extent of depletion of 13C in marine primary producers. These results indicate that the difference in isotopic composition of coeval marine carbonates and marine primary photosynthate was approximately 5 to 7 permil greater during the Mesozoic and early Cenozoic than at present. In contrast to the isotopic record of marine primary producers, isotopic compositions of terrestrial organic materials have remained approximately constant for this same interval of time. This difference in the isotopic records of marine and terrestrial organic matter is considered in terms of the mechanisms controlling the isotopic fractionation associated with photosynthetic fixation of carbon. We show that the decreased isotopic fractionation between marine carbonates and organic matter from the Early to mid-Cenozoic may record variations in the abundance of atmospheric CO2.

  4. Antiviral Activity of Natural Products Extracted from Marine Organisms

    PubMed Central

    Uzair, Bushra; Mahmood, Zahra; Tabassum, Sobia

    2011-01-01

    Many epidemics have broken out over the centuries. Hundreds and thousands of humans have died over a disease. Available treatments for infectious diseases have always been limited. Some infections are more deadly than the others, especially viral pathogens. These pathogens have continuously resisted all kinds of medical treatment, due to a need for new treatments to be developed. Drugs are present in nature and are also synthesized in vitro and they help in combating diseases and restoring health. Synthesizing drugs is a hard and time consuming task, which requires a lot of man power and financial aid. However, the natural compounds are just lying around on the earth, may it be land or water. Over a thousand novel compounds isolated from marine organisms are used as antiviral agents. Others are being pharmacologically tested. Today, over forty antiviral compounds are present in the pharmacological market. Some of these compounds are undergoing clinical and preclinical stages. Marine compounds are paving the way for a new trend in modern medicine. PMID:23678429

  5. Radioactivity In Marine Organisms From Northeast Atlantic Ocean

    SciTech Connect

    Carvalho, Fernando P.; Oliveira, Joao M.

    2008-08-07

    Naturally-occurring radionuclides such as {sup 238}U, {sup 234}U, {sup 230}Th, {sup 226}Ra, {sup 210}Po, {sup 210}Pb and {sup 232}Th, and artificial radionuclides such as {sup 137}Cs, {sup 239+240}Pu and {sup 241}Am, were measured in a large number of marine species. In common fish species, typical concentrations of {sup 210}Po ranged from 10{sup 2} to 10{sup 4} mBq kg{sup -1} (wet weight), {sup 226}Ra concentrations ranged from 1x10{sup 2} to 5xl0{sup 2} mBq kg{sup -1}, {sup 238}U was at about 10 mBq kg{sup -1} and {sup 232}Th at about 0.5 mBq kg{sup -1}. Radiation doses to marine organisms originated by naturally-occurring and artificial radionuclides accumulated in tissues and by external radiation sources were computed and compared. Internal sources generally give higher contribution to the absorbed radiation dose than external sources. Amongst radionuclides accumulated in fish muscle and acting as internal radiation sources, natural {sup 210}Po and {sup 40}K give the largest contribution to the absorbed radiation dose, while artificial radionuclides such as {sup 137}Cs and {sup 239+240}Pu contribute with less than 0.5% to the absorbed radiation dose from all internal sources.

  6. Sulfur and carbon cycling in organic-rich marine sediments

    NASA Technical Reports Server (NTRS)

    Martens, C. S.

    1985-01-01

    Nearshore, continental shelf, and slope sediments are important sites of microbially mediated carbon and sulfur cycling. Marine geochemists investigated the rates and mechanisms of cycling processes in these environments by chemical distribution studies, in situ rate measurements, and steady state kinetic modeling. Pore water chemical distributions, sulfate reduction rates, and sediment water chemical fluxes were used to describe cycling on a ten year time scale in a small, rapidly depositing coastal basin, Cape Lookout Bight, and at general sites on the upper continental slope off North Carolina, U.S.A. In combination with 210 Pb sediment accumulation rates, these data were used to establish quantitative carbon and sulfur budgets as well as the relative importance of sulfate reduction and methanogeneis as the last steps in the degradation of organic matter.

  7. Correlates of Instrumental and Affective Attachment to Organizations.

    ERIC Educational Resources Information Center

    Angle, Harold L.

    It has been suggested that different forms of organizational commitment have different outcomes as well as different antecedents. To test the hypothesis that instrumental attachment to an organization is associated with members' investments in the organization, and that affective attachment to an organization is influenced primarily by the way the…

  8. Large-scale climatic anomalies affect marine predator foraging behaviour and demography

    NASA Astrophysics Data System (ADS)

    Bost, Charles A.; Cotté, Cedric; Terray, Pascal; Barbraud, Christophe; Bon, Cécile; Delord, Karine; Gimenez, Olivier; Handrich, Yves; Naito, Yasuhiko; Guinet, Christophe; Weimerskirch, Henri

    2015-10-01

    Determining the links between the behavioural and population responses of wild species to environmental variations is critical for understanding the impact of climate variability on ecosystems. Using long-term data sets, we show how large-scale climatic anomalies in the Southern Hemisphere affect the foraging behaviour and population dynamics of a key marine predator, the king penguin. When large-scale subtropical dipole events occur simultaneously in both subtropical Southern Indian and Atlantic Oceans, they generate tropical anomalies that shift the foraging zone southward. Consequently the distances that penguins foraged from the colony and their feeding depths increased and the population size decreased. This represents an example of a robust and fast impact of large-scale climatic anomalies affecting a marine predator through changes in its at-sea behaviour and demography, despite lack of information on prey availability. Our results highlight a possible behavioural mechanism through which climate variability may affect population processes.

  9. Large-scale climatic anomalies affect marine predator foraging behaviour and demography

    PubMed Central

    Bost, Charles A.; Cotté, Cedric; Terray, Pascal; Barbraud, Christophe; Bon, Cécile; Delord, Karine; Gimenez, Olivier; Handrich, Yves; Naito, Yasuhiko; Guinet, Christophe; Weimerskirch, Henri

    2015-01-01

    Determining the links between the behavioural and population responses of wild species to environmental variations is critical for understanding the impact of climate variability on ecosystems. Using long-term data sets, we show how large-scale climatic anomalies in the Southern Hemisphere affect the foraging behaviour and population dynamics of a key marine predator, the king penguin. When large-scale subtropical dipole events occur simultaneously in both subtropical Southern Indian and Atlantic Oceans, they generate tropical anomalies that shift the foraging zone southward. Consequently the distances that penguins foraged from the colony and their feeding depths increased and the population size decreased. This represents an example of a robust and fast impact of large-scale climatic anomalies affecting a marine predator through changes in its at-sea behaviour and demography, despite lack of information on prey availability. Our results highlight a possible behavioural mechanism through which climate variability may affect population processes. PMID:26506134

  10. Large-scale climatic anomalies affect marine predator foraging behaviour and demography.

    PubMed

    Bost, Charles A; Cotté, Cedric; Terray, Pascal; Barbraud, Christophe; Bon, Cécile; Delord, Karine; Gimenez, Olivier; Handrich, Yves; Naito, Yasuhiko; Guinet, Christophe; Weimerskirch, Henri

    2015-01-01

    Determining the links between the behavioural and population responses of wild species to environmental variations is critical for understanding the impact of climate variability on ecosystems. Using long-term data sets, we show how large-scale climatic anomalies in the Southern Hemisphere affect the foraging behaviour and population dynamics of a key marine predator, the king penguin. When large-scale subtropical dipole events occur simultaneously in both subtropical Southern Indian and Atlantic Oceans, they generate tropical anomalies that shift the foraging zone southward. Consequently the distances that penguins foraged from the colony and their feeding depths increased and the population size decreased. This represents an example of a robust and fast impact of large-scale climatic anomalies affecting a marine predator through changes in its at-sea behaviour and demography, despite lack of information on prey availability. Our results highlight a possible behavioural mechanism through which climate variability may affect population processes. PMID:26506134

  11. Isolation of microplastics in biota-rich seawater samples and marine organisms

    NASA Astrophysics Data System (ADS)

    Cole, Matthew; Webb, Hannah; Lindeque, Pennie K.; Fileman, Elaine S.; Halsband, Claudia; Galloway, Tamara S.

    2014-03-01

    Microplastic litter is a pervasive pollutant present in aquatic systems across the globe. A range of marine organisms have the capacity to ingest microplastics, resulting in adverse health effects. Developing methods to accurately quantify microplastics in productive marine waters, and those internalized by marine organisms, is of growing importance. Here we investigate the efficacy of using acid, alkaline and enzymatic digestion techniques in mineralizing biological material from marine surface trawls to reveal any microplastics present. Our optimized enzymatic protocol can digest >97% (by weight) of the material present in plankton-rich seawater samples without destroying any microplastic debris present. In applying the method to replicate marine samples from the western English Channel, we identified 0.27 microplastics m-3. The protocol was further used to extract microplastics ingested by marine zooplankton under laboratory conditions. Our findings illustrate that enzymatic digestion can aid the detection of microplastic debris within seawater samples and marine biota.

  12. Isolation of microplastics in biota-rich seawater samples and marine organisms.

    PubMed

    Cole, Matthew; Webb, Hannah; Lindeque, Pennie K; Fileman, Elaine S; Halsband, Claudia; Galloway, Tamara S

    2014-01-01

    Microplastic litter is a pervasive pollutant present in aquatic systems across the globe. A range of marine organisms have the capacity to ingest microplastics, resulting in adverse health effects. Developing methods to accurately quantify microplastics in productive marine waters, and those internalized by marine organisms, is of growing importance. Here we investigate the efficacy of using acid, alkaline and enzymatic digestion techniques in mineralizing biological material from marine surface trawls to reveal any microplastics present. Our optimized enzymatic protocol can digest >97% (by weight) of the material present in plankton-rich seawater samples without destroying any microplastic debris present. In applying the method to replicate marine samples from the western English Channel, we identified 0.27 microplastics m(-3). The protocol was further used to extract microplastics ingested by marine zooplankton under laboratory conditions. Our findings illustrate that enzymatic digestion can aid the detection of microplastic debris within seawater samples and marine biota. PMID:24681661

  13. Isolation of microplastics in biota-rich seawater samples and marine organisms

    PubMed Central

    Cole, Matthew; Webb, Hannah; Lindeque, Pennie K.; Fileman, Elaine S.; Halsband, Claudia; Galloway, Tamara S.

    2014-01-01

    Microplastic litter is a pervasive pollutant present in aquatic systems across the globe. A range of marine organisms have the capacity to ingest microplastics, resulting in adverse health effects. Developing methods to accurately quantify microplastics in productive marine waters, and those internalized by marine organisms, is of growing importance. Here we investigate the efficacy of using acid, alkaline and enzymatic digestion techniques in mineralizing biological material from marine surface trawls to reveal any microplastics present. Our optimized enzymatic protocol can digest >97% (by weight) of the material present in plankton-rich seawater samples without destroying any microplastic debris present. In applying the method to replicate marine samples from the western English Channel, we identified 0.27 microplastics m−3. The protocol was further used to extract microplastics ingested by marine zooplankton under laboratory conditions. Our findings illustrate that enzymatic digestion can aid the detection of microplastic debris within seawater samples and marine biota. PMID:24681661

  14. Korean Elementary School Students' Perceptions of Relationship with Marine Organisms

    ERIC Educational Resources Information Center

    Kim, Jong-Mun; Anderson, David; Scott, Sandra

    2013-01-01

    This exploratory study examined the perceptions of, and relationship with, marine organisms of 81 urban sixth grade Korean students using a specifically designed survey questionnaire. The study outcomes revealed that these Korean students have limited experience with and different levels of connectedness to marine organisms. Viewed through…

  15. Sources and composition of submicron organic mass in marine aerosol particles

    SciTech Connect

    Frossard, Amanda A.; Russell, Lynn M.; Burrows, Susannah M.; Elliott, Scott M.; Bates, Timothy S.; Quinn, Patricia K.

    2014-11-27

    Recent studies have proposed a variety of interpretations of the sources and composition of atmospheric marine aerosol particles (aMA) based on a range of physical and chemical measurements collected during open-ocean research cruises. To investigate the processes that affect marine organic particles, this study uses the characteristic functional group composition (from Fourier transform infrared (FTIR) spectroscopy) of aMAP from five ocean regions to show that: (i) The organic functional group composition of aMAP that can be identified as atmospheric primary marine (ocean-derived) aerosol (aPMA) is 65±12% hydroxyl, 21±9% alkane, 6±6% amine, and 7±8% carboxylic acid functional groups. Contributions from photochemical reactions add carboxylic acid groups (15%-25%), shipping effluent in seawater and ship emissions add additional alkane groups (up to 70%), and coastal emissions mix in alkane and carboxylic acid groups from coastal pollution sources. (ii) The organic composition of aPMA is nearly identical to model generated primary marine aerosol particles (gPMA) from bubbled seawater (55% hydroxyl, 32% alkane, and 13% amine functional groups), indicating that its overall functional group composition is the direct consequence of the organic constituents of the seawater source. (iii) While the seawater organic functional group composition was nearly invariant across all three ocean regions studied, the gPMA alkane group fraction increased with chlorophyll-a concentrations (r = 0.79). gPMA from productive seawater had a larger fraction of alkane functional groups (35%) compared to gPMA from non-productive seawater (16%), likely due to the presence of surfactants in productive seawater that stabilize the bubble film and lead to preferential drainage of the more soluble (lower alkane group fraction) organic components. gPMA has a hydroxyl group absorption peak location characteristic of monosaccharides and disaccharides, where the seawater OM hydroxyl group peak

  16. Sources and composition of submicron organic mass in marine aerosol particles

    DOE PAGESBeta

    Frossard, Amanda A.; Russell, Lynn M.; Burrows, Susannah M.; Elliott, Scott M.; Bates, Timothy S.; Quinn, Patricia K.

    2014-11-27

    Recent studies have proposed a variety of interpretations of the sources and composition of atmospheric marine aerosol particles (aMA) based on a range of physical and chemical measurements collected during open-ocean research cruises. To investigate the processes that affect marine organic particles, this study uses the characteristic functional group composition (from Fourier transform infrared (FTIR) spectroscopy) of aMAP from five ocean regions to show that: (i) The organic functional group composition of aMAP that can be identified as atmospheric primary marine (ocean-derived) aerosol (aPMA) is 65±12% hydroxyl, 21±9% alkane, 6±6% amine, and 7±8% carboxylic acid functional groups. Contributions from photochemicalmore » reactions add carboxylic acid groups (15%-25%), shipping effluent in seawater and ship emissions add additional alkane groups (up to 70%), and coastal emissions mix in alkane and carboxylic acid groups from coastal pollution sources. (ii) The organic composition of aPMA is nearly identical to model generated primary marine aerosol particles (gPMA) from bubbled seawater (55% hydroxyl, 32% alkane, and 13% amine functional groups), indicating that its overall functional group composition is the direct consequence of the organic constituents of the seawater source. (iii) While the seawater organic functional group composition was nearly invariant across all three ocean regions studied, the gPMA alkane group fraction increased with chlorophyll-a concentrations (r = 0.79). gPMA from productive seawater had a larger fraction of alkane functional groups (35%) compared to gPMA from non-productive seawater (16%), likely due to the presence of surfactants in productive seawater that stabilize the bubble film and lead to preferential drainage of the more soluble (lower alkane group fraction) organic components. gPMA has a hydroxyl group absorption peak location characteristic of monosaccharides and disaccharides, where the seawater OM hydroxyl group

  17. Coupled Ocean-Atmosphere Loss of Refractory Marine Dissolved Organic Matter

    NASA Astrophysics Data System (ADS)

    Kieber, D. J.; Keene, W. C.; Frossard, A. A.; Long, M. S.; Russell, L. M.; Maben, J. R.; Kinsey, J. D.; Tyssebotn, I. M.; Quinn, P.; Bates, T. S.

    2013-12-01

    Marine aerosol produced in the oceans from bursting bubbles and breaking waves is number dominated by submicron aerosol that are highly enriched in marine organic matter relative to seawater. Recent studies suggest that these organic-rich, submicron aerosol have a major impact on tropospheric chemistry and climate. It has been assumed this marine-derived aerosol organic matter is of recent origin stemming from biological activity in the photic zone. However, we deployed a marine aerosol generator on a recent cruise in the Sargasso Sea with seawater collected from 2500 m and showed that the aerosol generated from this seawater was enriched with organic matter to the same level as observed in surface Sargasso seawater, implying that the marine organic matter flux from the oceans into atmospheric aerosol is partly due to marine organic matter not of recent origin. We propose that marine aerosol production and subsequent physical and photochemical atmospheric evolution is the main process whereby old, refractory organic matter is removed from the oceans, thereby closing the carbon budget in the oceans and solving a long-standing conundrum regarding the removal mechanism for this organic matter in the sea. The implications of this study for couplings in the ocean-atmosphere cycling of organic matter will be discussed.

  18. Archaea in Organic-Lean and Organic-Rich Marine Subsurface Sediments: An Environmental Gradient Reflected in Distinct Phylogenetic Lineages

    PubMed Central

    Durbin, Alan M.; Teske, Andreas

    2012-01-01

    Examining the patterns of archaeal diversity in little-explored organic-lean marine subsurface sediments presents an opportunity to study the association of phylogenetic affiliation and habitat preference in uncultured marine Archaea. Here we have compiled and re-analyzed published archaeal 16S rRNA clone library datasets across a spectrum of sediment trophic states characterized by a wide range of terminal electron-accepting processes. Our results show that organic-lean marine sediments in deep marine basins and oligotrophic open ocean locations are inhabited by distinct lineages of archaea that are not found in the more frequently studied, organic-rich continental margin sediments. We hypothesize that different combinations of electron donor and acceptor concentrations along the organic-rich/organic-lean spectrum result in distinct archaeal communities, and propose an integrated classification of habitat characteristics and archaeal community structure. PMID:22666218

  19. Effects of global climate change and organic pollution on nutrient cycling in marine sediments

    NASA Astrophysics Data System (ADS)

    Sanz-Lázaro, C.; Valdemarsen, T.; Holmer, M.

    2015-01-01

    Increasing ocean temperature due to climate change is an important anthropogenic driver of ecological change in coastal systems, where sediments play a major role in nutrient cycling. Our ability to predict ecological consequences of climate change is enhanced by simulating real scenarios especially when the interactions among drivers may not be just additive. Based on predicted climate change scenarios, we tested the effect of temperature and organic pollution on nutrient release from coastal sediments to the water column in a mesocosm experiment. PO43- release rates from sediments followed the same trends as organic matter mineralization rates, and increased linearly with temperature and were significantly higher under organic pollution than under non-polluted conditions. NH4+ release only increased significantly when the temperature rise was above 6 °C, and was significantly higher in organic polluted compared to non-polluted sediments. Nutrient release to the water column was only a fraction from the mineralized organic matter, suggesting PO43- retention and NH4+ oxidation in the sediment. Bioturbation and bioirrigation appeared to be key processes responsible of this behaviour. Considering that the primary production of most marine basins is N-limited, the excess release of NH4+ at temperature rise >6 ° could enhance water column primary productivity, which may lead to the deterioration of the environmental quality. Climate change effects are expected to be accelerated in areas affected by organic pollution.

  20. Effects of temperature and organic pollution on nutrient cycling in marine sediments

    NASA Astrophysics Data System (ADS)

    Sanz-Lazaro, C.; Valdemarsen, T.; Holmer, M.

    2015-08-01

    Increasing ocean temperature due to climate change is an important anthropogenic driver of ecological change in coastal systems. In these systems sediments play a major role in nutrient cycling. Our ability to predict ecological consequences of climate change is enhanced by simulating real scenarios. Based on predicted climate change scenarios, we tested the effect of temperature and organic pollution on nutrient release from coastal sediments to the water column in a mesocosm experiment. PO43- release rates from sediments followed the same trends as organic matter mineralization rates, increased linearly with temperature and were significantly higher under organic pollution than under nonpolluted conditions. NH4+ release only increased significantly when the temperature rise was above 6 °C, and it was significantly higher in organic polluted compared to nonpolluted sediments. Nutrient release to the water column was only a fraction from the mineralized organic matter, suggesting PO43- retention and NH4+ oxidation in the sediment. Bioturbation and bioirrigation appeared to be key processes responsible for this behavior. Considering that the primary production of most marine basins is N-limited, the excess release of NH4+ at a temperature rise > 6 °C could enhance water column primary productivity, which may lead to the deterioration of the environmental quality. Climate change effects are expected to be accelerated in areas affected by organic pollution.

  1. Marine lake as in situ laboratory for studies of organic matter influence on speciation and distribution of trace metals

    NASA Astrophysics Data System (ADS)

    Mlakar, Marina; Fiket, Željka; Geček, Sunčana; Cukrov, Neven; Cuculić, Vlado

    2015-07-01

    Karst marine lakes are unique marine systems, also recognized as in situ "laboratories" in which geochemical processes on a different scale compared to the open sea, can be observed. In this study, organic matter cycle and its impact on distribution of trace metals in the marine lake Mir, located on Dugi Otok Island, in the central part of the eastern Adriatic Sea, was investigated for the first time. Studied marine lake is small, isolated, shallow basin, with limited communication with the open sea. Intense spatial and seasonal variations of organic matter, dissolved and particulate (DOC, POC), and dissolved trace metals concentrations in the water column of the Lake are governed predominantly by natural processes. Enhanced oxygen consumption in the Lake during summer season, high DOC and POC concentrations and low redox potential result in occasional occurrence of anoxic conditions in the bottom layers with appearance of sulfur species. Speciation modeling showed that dissolved trace metals Cu, Pb and Zn, are mostly bound to organic matter, while Cd, Co and Ni are present predominantly as free ions and inorganic complexes. Trace metals removal from the water column and their retention in the sediment was found to depend on the nature of the relationship between specific metal and organic or inorganic phases, sulfides, Fe-oxyhydroxydes or biogenic calcite. The above is reflected in the composition of the sediments, which are, in addition to influence of karstic background and bathymetry of the basin, significantly affected by accumulation of detritus at the bottom of the Lake.

  2. New evidence of an organic layer on marine aerosols

    NASA Astrophysics Data System (ADS)

    Tervahattu, Heikki; Hartonen, Kari; Kerminen, Veli-Matti; Kupiainen, Kaarle; Aarnio, Päivi; Koskentalo, Tarja; Tuck, Adrian F.; Vaida, Veronica

    2002-04-01

    An extraordinary episode of fine particles (diameter mainly <2.5 μm) occurred in Helsinki, southern Finland, at the end of February 1998. The air masses came from the North Atlantic Ocean and passed over France, Germany, and southern Scandinavia. Particles were collected during the episode as well as before and after it. Uncoated particle samples were adhered to an indium substrate and were studied by a scanning electron microscope (SEM) coupled with an energy dispersive X-ray microanalyzer (EDX). A great proportion of the particles behaved differently than aerosols previously studied by microscopic techniques. The particles (size mainly 0.5-1 μm) did not exhibit solid shape. They were ``bubbling'' or ``pulsating'' continually, enlarging in one part and shrinking in another. Some particles were broken down, especially when the beam of the electron microscope was focused on them. EDX analyses showed that the particles contained much carbon together with oxygen, sulfur, and sodium. Ion analyses by ion chromatography revealed high concentrations of sodium, sulfate, nitrate, and ammonium. The particles were identified as marine sea-salt aerosols, which had accumulated anthropogenic emissions and lost chloride during their flow through continental polluted air. The shape fluctuations and the high carbon content observed by SEM/EDX led to the conclusion that the aerosols were enclosed by an organic membrane. Direct insertion probe/mass spectrometry investigations showed remarkable amounts of fragmented aliphatic hydrocarbons, which were considered as an evidence of a lipid membrane on the surface of the particles. The impact of the posited organic film on the properties of sea-salt particles, as well as on Earth's climate, is discussed.

  3. Marine organic aerosol and oceanic biological activity: what we know and what we need (Invited)

    NASA Astrophysics Data System (ADS)

    Facchini, M.

    2009-12-01

    Observations carried out in the North Atlantic as well as in other marine locations evidenced a seasonal dependence of sub micron particle chemical composition on biological oceanic activity and a potentially important marine aerosol organic component from primary and/or secondary formation processes associated to marine vegetation and its seasonal cycle. Primary organics generated by bubble bursting in high biological activity periods are almost entirely water insoluble (WIOM up to 96 ± 2 % )and are constituted by aggregation of lipopolysaccharides exuded by phytoplankton with dominant surface tension character. In many marine environments the secondary organic fraction is dominated by MSA and by several oxygenated species (mainly carboxylic acids). New measurements also show the potential importance of secondary organic N species (biogenic amine salts ). However a large fraction of the secondary organic fraction (SOA) is still not characterized and the precursors are not identified. For modeling marine organics, besides reducing the uncertainty in the knowledge of the chemical composition and new precursors, it is of crucial importance to link marine aerosol organic composition to satellite products that could be better proxy for marine biological activity and of its decomposition products than chlorophyll-a.

  4. Depletion of 13C in Cretaceous marine organic matter: Source, diagenetic, or environmental sigal?

    USGS Publications Warehouse

    Dean, W.E.; Arthur, M.A.; Claypool, G.E.

    1986-01-01

    Geochemical studies of Cretaceous strata rich in organic carbon (OC) from Deep Sea Drilling Project (DSDP) sites and several land sections reveal several consistent relationships among amount of OC, hydrocarbon generating potential of kerogen (measured by pyrolysis as the hydrogen index, HI), and the isotopic composition of the OC. First, there is a positive correlation between HI and OC in strata that contain more than about 1% OC. Second, percent OC and HI often are negatively correlated with carbon isotopic composition (?? 13C) of kerogen. The relationship between HI and OC indicates that as the amount of organic matter increases, this organic matter tends to be more lipid rich reflecting the marine source of the organic matter. Cretaceous samples that contain predominantly marine organic matter tend to be isotopically lighter than those that contain predominantly terrestrial organic matter. Average ?? 13C values for organic matter from most Cretaceous sites are between -26 and -28???, and values heavier than about -25??? occur at very few sites. Most of the ?? 13C values of Miocene to Holocene OC-rich strata and modern marine plankton are between -16 to -23???. Values of ??13C of modern terrestrial organic matter are mostly between -23 and -33???. The depletion of terrestial OC in 13C relative to marine planktonic OC is the basis for numerous statements in the literature that isotopically light Cretaceous organic matter is of terrestrial origin, even though other organic geochemical and(or) optical indicators show that the organic matter is mainly of marine origin. A difference of about 5??? in ?? 13C between modern and Cretaceous OC-rich marine strata suggests either that Cretaceous marine planktonic organic matter had the same isotopic signature as modern marine plankton and that signature has been changed by diagenesis, or that OC derived from Cretaceous marine plankton was isotopically lighter by about 5??? relative to modern plankton OC. Diagenesis does

  5. Biosynthesis of polybrominated aromatic organic compounds by marine bacteria

    PubMed Central

    Agarwal, Vinayak; El Gamal, Abrahim A.; Yamanaka, Kazuya; Poth, Dennis; Kersten, Roland D.; Schorn, Michelle; Allen, Eric E.; Moore, Bradley S.

    2014-01-01

    Polybrominated diphenyl ethers (PBDEs) and polybrominated bipyrroles are natural products that bioaccumulate in the marine food chain. PBDEs have attracted widespread attention due to their persistence in the environment and potential toxicity to humans. However, the natural origins of PBDE biosynthesis are not known. Here we report marine bacteria as producers of PBDEs and establish a genetic and molecular foundation for their production that unifies paradigms for the elaboration of bromophenols and bromopyrroles abundant in marine biota. We provide biochemical evidence of marine brominase enzymes revealing decarboxylative-halogenation enzymology previously unknown among halogenating enzymes. Biosynthetic motifs discovered in our study were used to mine sequence databases to discover unrealized marine bacterial producers of organobromine compounds. PMID:24974229

  6. The second skin: ecological role of epibiotic biofilms on marine organisms.

    PubMed

    Wahl, Martin; Goecke, Franz; Labes, Antje; Dobretsov, Sergey; Weinberger, Florian

    2012-01-01

    In the aquatic environment, biofilms on solid surfaces are omnipresent. The outer body surface of marine organisms often represents a highly active interface between host and biofilm. Since biofilms on living surfaces have the capacity to affect the fluxes of information, energy, and matter across the host's body surface, they have an important ecological potential to modulate the abiotic and biotic interactions of the host. Here we review existing evidence how marine epibiotic biofilms affect their hosts' ecology by altering the properties of and processes across its outer surfaces. Biofilms have a huge potential to reduce its host's access to light, gases, and/or nutrients and modulate the host's interaction with further foulers, consumers, or pathogens. These effects of epibiotic biofilms may intensely interact with environmental conditions. The quality of a biofilm's impact on the host may vary from detrimental to beneficial according to the identity of the epibiotic partners, the type of interaction considered, and prevailing environmental conditions. The review concludes with some unresolved but important questions and future perspectives. PMID:22936927

  7. The Second Skin: Ecological Role of Epibiotic Biofilms on Marine Organisms

    PubMed Central

    Wahl, Martin; Goecke, Franz; Labes, Antje; Dobretsov, Sergey; Weinberger, Florian

    2012-01-01

    In the aquatic environment, biofilms on solid surfaces are omnipresent. The outer body surface of marine organisms often represents a highly active interface between host and biofilm. Since biofilms on living surfaces have the capacity to affect the fluxes of information, energy, and matter across the host’s body surface, they have an important ecological potential to modulate the abiotic and biotic interactions of the host. Here we review existing evidence how marine epibiotic biofilms affect their hosts’ ecology by altering the properties of and processes across its outer surfaces. Biofilms have a huge potential to reduce its host’s access to light, gases, and/or nutrients and modulate the host’s interaction with further foulers, consumers, or pathogens. These effects of epibiotic biofilms may intensely interact with environmental conditions. The quality of a biofilm’s impact on the host may vary from detrimental to beneficial according to the identity of the epibiotic partners, the type of interaction considered, and prevailing environmental conditions. The review concludes with some unresolved but important questions and future perspectives. PMID:22936927

  8. Environmental Proteomics: Changes in the Proteome of Marine Organisms in Response to Environmental Stress, Pollutants, Infection, Symbiosis, and Development

    NASA Astrophysics Data System (ADS)

    Tomanek, Lars

    2011-01-01

    Environmental proteomics, the study of changes in the abundance of proteins and their post-translational modifications, has become a powerful tool for generating hypotheses regarding how the environment affects the biology of marine organisms. Proteomics discovers hitherto unknown cellular effects of environmental stressors such as changes in thermal, osmotic, and anaerobic conditions. Proteomic analyses have advanced the characterization of the biological effects of pollutants and identified comprehensive and pollutant-specific sets of biomarkers, especially those highlighting post-translational modifications. Proteomic analyses of infected organisms have highlighted the broader changes occurring during immune responses and how the same pathways are attenuated during the maintenance of symbiotic relationships. Finally, proteomic changes occurring during the early life stages of marine organisms emphasize the importance of signaling events during development in a rapidly changing environment. Changes in proteins functioning in energy metabolism, cytoskeleton, protein stabilization and turnover, oxidative stress, and signaling are common responses to environmental change.

  9. Satellite Retrieval of Marine Stratocumulus Surface Coupling State and its Effect on the Clouds Cellular Organization

    NASA Astrophysics Data System (ADS)

    Goren, T.; Rosenfeld, D.

    2014-12-01

    A methodology for a complete description of the marine stratocumulus clouds geometrical and microphysical properties was developed and tested. These include, among others, coupling state and cloud geometrical depth. The methodology combines simultaneous observations from several A-TRAIN instruments (CALIPSO, CloudSat and MODIS) and re-analysis data. Analysis of different types of Marine Stratocumulus (MSC) scenes revealed interesting features. While most of the MSC that we have analyzed existed within a coupled Marine Boundary Layer (MBL), those that existed in a de-coupled MBL, i.e., cloud layer that is de-coupled from the ocean surface, lacked the typical spatial cellular organization. It was found that the occurrence of rain within closed cells breaks and organizes them into open cells only when the clouds are coupled with the surface. Otherwise the closed cells remain as thin lightly precipitating stratiform clouds having low cloud water. The coupling state was also found to affect the ability of drizzle to break closed cells, so that closed cells in a de-coupled MBL tend to produce stronger drizzle before breaking up. We hypothesize that rain driven downdrafts hit the surface and form gust fronts that trigger convective elements, which break the cloud deck, only when the clouds are coupled to the surface. Among the other problems that can be answered by using the presented methodology is disentangling the role of large scale meteorology and aerosols on the development of precipitation (i.e., cloud depth versus droplet concentrations as a limiting factor for drizzle initiation). Examples will be shown together with their physical interpretation.

  10. Legal and institutional tools to mitigate plastic pollution affecting marine species: Argentina as a case study.

    PubMed

    González Carman, Victoria; Machain, Natalia; Campagna, Claudio

    2015-03-15

    Plastics are the most common form of debris found along the Argentine coastline. The Río de la Plata estuarine area is a relevant case study to describe a situation where ample policy exists against a backdrop of plastics disposed by populated coastal areas, industries, and vessels; with resultant high impacts of plastic pollution on marine turtles and mammals. Policy and institutions are in place but the impact remains due to ineffective waste management, limited public education and awareness, and weaknesses in enforcement of regulations. This context is frequently repeated all over the world. We list possible interventions to increase the effectiveness of policy that require integrating efforts among governments, the private sector, non-governmental organizations and the inhabitants of coastal cities to reduce the amount of plastics reaching the Río de la Plata and protect threatened marine species. What has been identified for Argentina applies to the region and globally. PMID:25627195

  11. Selective preservation of organic matter in marine environments; processes and impact on the sedimentary record

    NASA Astrophysics Data System (ADS)

    Zonneveld, K. A. F.; Versteegh, G. J. M.; Kasten, S.; Eglinton, T. I.; Emeis, K.-C.; Huguet, C.; Koch, B. P.; de Lange, G. J.; de Leeuw, J. W.; Middelburg, J. J.; Mollenhauer, G.; Prahl, F. G.; Rethemeyer, J.; Wakeham, S. G.

    2010-02-01

    The present paper is the result of a workshop sponsored by the DFG Research Center/Cluster of Excellence MARUM "The Ocean in the Earth System", the International Graduate College EUROPROX, and the Alfred Wegener Institute for Polar and Marine Research. The workshop brought together specialists on organic matter degradation and on proxy-based environmental reconstruction. The paper deals with the main theme of the workshop, understanding the impact of selective degradation/preservation of organic matter (OM) in marine sediments on the interpretation of the fossil record. Special attention is paid to (A) the influence of the molecular composition of OM in relation to the biological and physical depositional environment, including new methods for determining complex organic biomolecules, (B) the impact of selective OM preservation on the interpretation of proxies for marine palaeoceanographic and palaeoclimatic reconstruction, and (C) past marine productivity and selective preservation in sediments. It appears that most of the factors influencing OM preservation have been identified, but many of the mechanisms by which they operate are partly, or even fragmentarily, understood. Some factors have not even been taken carefully into consideration. This incomplete understanding of OM breakdown hampers proper assessment of the present and past carbon cycle as well as the interpretation of OM based proxies and proxies affected by OM breakdown. To arrive at better proxy-based reconstructions "deformation functions" are needed, taking into account the transport and diagenesis-related molecular and atomic modifications following proxy formation. Some emerging proxies for OM degradation may shed light on such deformation functions. The use of palynomorph concentrations and selective changes in assemblage composition as models for production and preservation of OM may correct for bias due to selective degradation. Such quantitative assessment of OM degradation may lead to more

  12. How Long Do Marine Organisms Live? Investigations in the Marine Environment for Children.

    ERIC Educational Resources Information Center

    Schlenker, Richard M.

    This activity is designed to use a collection of marine bivalve shells. From these shells, students can determine approximate ages of the shells, compare weather conditions to shell ages, and learn problems of this technique. (RH)

  13. Nitrogenated and aliphatic organic vapors as possible drivers for marine secondary organic aerosol growth

    NASA Astrophysics Data System (ADS)

    Dall'Osto, Manuel; Ceburnis, Darius; Monahan, Ciaran; Worsnop, Douglas R.; Bialek, Jakub; Kulmala, Markku; KurtéN, Theo; Ehn, Mikael; Wenger, John; Sodeau, John; Healy, Robert; O'Dowd, Colin

    2012-06-01

    Measurements of marine aerosol chemistry, using state-of-the-art mass spectrometry, as well as aerosol microphysics, hygroscopicity and cloud condensation nuclei (CCN) activity were undertaken during new particle growth events. The events were detected in air advecting over North East (NE) Atlantic waters during the EUCAARI Intensive Observation Period in June 2008 at Mace Head, Ireland. During these growth events, the aerosol mass spectrometers illustrated increases in accumulation mode aerosol phase nitrogenated and aliphatic compounds thought to condense from the gas phase. Since the composition changes observed in the accumulation mode occurred simultaneously to the growth of the accumulation, Aitken and nucleation modes, the growth of both the nucleation mode and the Aitken mode is attributed to the condensation of these species. Nitrogenated compounds like amines are also plausible candidates in the nucleation process, as suggested by quantum mechanic calculations. It is also plausible that amides and organic nitrites, also identified by the mass spectrometers, are possible candidate chemical compounds, suggesting that multiple types of chemical species may be contributing. Given that these open ocean aerosol formation and growth events occur in very clean polar marine air masses, we suggest that the organic compounds responsible for particle formation and growth are mainly of biogenic origin. Despite increasing the particle number concentration, the initial effect is to suppress hygroscopicity and CCN activity.

  14. Marine Chloroflexus-like Organisms Synthesize Mid-Chain Branched Monomethylalkanes

    NASA Astrophysics Data System (ADS)

    Parenteau, M. N.; Jahnke, L. L.; Green, S. J.; Boomer, S. M.; Pierson, B. K.

    2010-04-01

    Mid-chain branched mono- and dimethylalkanes (MMA and DMA, respectively) are considered biomarkers for cyanobacteria. In this study, we report the synthesis of a series of MMAs by anoxygenic phototrophic marine Chloroflexus-like organisms (MCLOs).

  15. Microbial processes and organic priority substances in marine coastal sediments (Adriatic Sea, Italy)

    NASA Astrophysics Data System (ADS)

    Zoppini, Annamaria; Ademollo, Nicoletta; Amalfitano, Stefano; Dellisanti, Walter; Lungarini, Silvia; Miserocchi, Stefano; Patrolecco, Luisa; Langone, Leonardo

    2015-04-01

    PERSEUS EU FP7 Project aims to identify the interacting patterns of natural and human-derived pressures to assess their impact on marine ecosystems and, using the objectives and principles of the Marine Strategy Framework Directive (MSFD) as a vehicle, to design an effective and innovative research governance framework based on sound scientific knowledge. In the frame of this Project (subtask 1.3.3 ADREX: Adriatic and Ionian Seas Experiment), monitoring surveys were conducted in the Adriatic Sea (Italy) in order to study the variation of structural and functional characteristics of native bacterial communities and the occurrence of selected classes of organic priority substances in sediments. The study area represents a good natural laboratory sensitive to climate variability and human pressure, owing to the semi-enclosed nature of the Adriatic Sea and to the increasing trend of human activities in the coastal regions. During the cruise ADRI-13 (November 2013) and ADRI-14 (October 2014) we sampled several coastal sites from the mouth of the Po River to the Otranto strait. Surface sediments were collected in all areas, while sediment cores were sampled in selected sites. Microbes associated with marine sediments play an important role in the C-flux being responsible for the transformation of organic detritus (autochthonous and allochthonous) into biomass. The sediment bacterial abundance was determined by epifluorescence microscopy and the rate of bacterial carbon production by measuring the 3H-leucine uptake rates. The community respiration rate was estimated by the measurement of the electron transport system (ETS) activity. The sediment contamination level was determined by measuring the concentration of contaminants included in the list of organic priority substances: PAHs, bisphenol A (BPA), alkylphenols (APs). The extraction/clean-up of PAHs, BPA and APs was performed by ultrasonic bath with the appropriate solvents, followed by analytical determination with

  16. Mass Spectrometry-Based Metabolomics to Elucidate Functions in Marine Organisms and Ecosystems

    PubMed Central

    Goulitquer, Sophie; Potin, Philippe; Tonon, Thierry

    2012-01-01

    Marine systems are very diverse and recognized as being sources of a wide range of biomolecules. This review provides an overview of metabolite profiling based on mass spectrometry (MS) approaches in marine organisms and their environments, focusing on recent advances in the field. We also point out some of the technical challenges that need to be overcome in order to increase applications of metabolomics in marine systems, including extraction of chemical compounds from different matrices and data management. Metabolites being important links between genotype and phenotype, we describe added value provided by integration of data from metabolite profiling with other layers of omics, as well as their importance for the development of systems biology approaches in marine systems to study several biological processes, and to analyze interactions between organisms within communities. The growing importance of MS-based metabolomics in chemical ecology studies in marine ecosystems is also illustrated. PMID:22690147

  17. Comparing Organic Aerosol Composition from Marine Biogenic Sources to Seawater and to Physical Sea Spray Models

    NASA Astrophysics Data System (ADS)

    Russell, L. M.; Frossard, A. A.; Sanchez, K.; Massoli, P.; Elliott, S.; Burrows, S. M.; Bates, T. S.; Quinn, P.

    2015-12-01

    In much of the marine atmosphere, organic components in aerosol particles have many sources other than sea spray that contribute organic constituents. For this reason, physical sea spray models provide an important technique for studying the organic composition of particles from marine biogenic sources. The organic composition of particles produced by two different physical sea spray models were measured in three open ocean seawater types: (i) Coastal California in the northeastern Pacific, which is influenced by wind-driven, large-scale upwelling leading to productive or eutrophic (nutrient-rich) seawater and high chl-a concentrations, (ii) George's Bank in the northwestern Atlantic, which is also influenced by nutrient upwelling and eutrophic seawater with phytoplankton productivity and high chl-a concentrations, and (iii) the Sargasso Sea in the subtropical western Atlantic, which is oligotrophic and nutrient-limited, reflected in low phytoplankton productivity and low chl-a concentrations. Fourier transform infrared spectroscopy provides information about the functional group composition that represents the marine organic fraction more completely than is possible with techniques that measure non-refractory mass (vaporizable at 650°C). After separating biogenic marine particles from those from other sources, the measured compositions of atmospheric marine aerosol particles from three ocean regions is 65±12% hydroxyl, 21±9% alkane, 6±6% amine, and 7±8% carboxylic acid functional groups. The organic composition of atmospheric primary marine (ocean-derived) aerosol particles is nearly identical to model generated primary marine aerosol particles from bubbled seawater. Variability in productive and non-productive seawater may be caused by the presence of surfactants that can stabilize the bubble film and lead to preferential drainage of the more soluble (lower alkane group fraction) organic components without substantial changes in overall group composition

  18. Volatile organic compounds in the marine troposphere and surface oceans: methods, measurements and biogeochemical implications

    NASA Astrophysics Data System (ADS)

    Hudson, Edward

    2010-09-01

    Volatile organic compounds (VOCs), among them non-methane hydrocarbons (NMHCs) and low molecular weight carbonyl compounds (aldehydes and ketones), affect the oxidative capacity of the atmosphere and thus pollutant lifetimes and global climate. VOCs in the surface oceans may be transported into, or derived from, the atmosphere. This thesis describes the development and optimization of chromatographic and preconcentration methods to determine volatile organic compounds (VOCs) in surface seawater and marine air, and their use to explore VOC distribution and fluxes at the seaair interface. It includes the first measurements of many carbonyl compounds in temperate and subarctic marine waters and the first estimates of fluxes of several aldehydes from the ocean surface into the marine atmosphere. Sea surface air, size-fractionated marine aerosols, and surface ocean water dissolved organic matter were simultaneously sampled in the Nordic seas. Nineteen C2-C7 NMHCs were quantified in the air samples. Site-to-site variability in NMHC concentrations was high, suggesting variable, local sources. The aerosols consisted mainly of inorganic marine material, but a culturable bacterium identified as Micrococcus luteus was also isolated from the 9.9 -- 18 mum fraction, suggesting organic matter may be transferred from the surface oceans to the atmosphere by marine aerosols. Lastly, a number of VOCs, including acetone, were detected in the seawater samples using solid-phase microextraction (SPME), leading to the subsequent development of an SPME application for carbonyl compounds in seawater. A mobile, economical and solventless method for the detection and quantification of carbonyl compounds in seawater, a matrix of global importance, was developed. The compounds were derivatized using O-(2,3,4,5,6-pentafluorobenzyl)-hydroxylamine (PFBHA)and then pre-concentrated by SPME for gas chromatography with mass spectrometric (GC/MS) or flame ionization (GC-FID) detection. The method was

  19. The availability of dissolved organic phosphorus compounds to marine phytoplankton

    NASA Astrophysics Data System (ADS)

    Hua-Sheng, Hong; Hai-Li, Wang; Bang-Qin, Huang

    1995-06-01

    The availability of three dissolved organic phosphorus (DOP) compounds as nutrient sources for experimental culture of three algae was studied. Results indicated that these compounds could be utilized by algae, and that dissolved inorganic phosphorus (DIP) was first to be uptaken when various forms of phosphorus (DIP and DOP) co-existed. Dicrateria zhanjiangensis' uptake of sodium glycerophosphate was faster than that of D-ribose-5-phosphate. The increase of sodium glycerophosphate had little effect on the maximum uptake rate( V max) of Chlorella sp., but increased the semisaturation constant( K s) remarkably; the photosynthesis rates(PR) of Dicrateria zhanjiangensis and Chlorella sp. were rarely affected by using various forms of phosphorus in the culture experiments. The possible DOP pathways utilized by algae are discussed.

  20. Sulfonates: A novel class of organic sulfur compounds in marine sediments

    NASA Astrophysics Data System (ADS)

    Vairavamurthy, Appathurai; Zhou, Weiqing; Eglinton, Timothy; Manowitz, Bernard

    1994-11-01

    X-ray absorption near-edge structure spectroscopy (XANES) used to measure sulfur speciation in a variety of organic-rich marine sediments has established sulfonates as a novel and major component of sedimentary organic sulfur. The origins of sulfonates in sediments are not clear, although both biological and geochemical mechanisms are possible. The accumulation of oxidized sulfonate sulfur in reducing marine sediments was not known previously; hence, a new perspective in sulfur geochemistry is established. The biogeochemical implications of the presence of sulfonates in marine sediments are discussed.

  1. Estimates of Marine Debris Accumulation on Beaches Are Strongly Affected by the Temporal Scale of Sampling

    PubMed Central

    Smith, Stephen D. A.; Markic, Ana

    2013-01-01

    Marine debris is a global issue with impacts on marine organisms, ecological processes, aesthetics and economies. Consequently, there is increasing interest in quantifying the scale of the problem. Accumulation rates of debris on beaches have been advocated as a useful proxy for at-sea debris loads. However, here we show that past studies may have vastly underestimated the quantity of available debris because sampling was too infrequent. Our study of debris on a small beach in eastern Australia indicates that estimated daily accumulation rates decrease rapidly with increasing intervals between surveys, and the quantity of available debris is underestimated by 50% after only 3 days and by an order of magnitude after 1 month. As few past studies report sampling frequencies of less than a month, estimates of the scale of the marine debris problem need to be critically re-examined and scaled-up accordingly. These results reinforce similar, recent work advocating daily sampling as a standard approach for accurate quantification of available debris in coastal habitats. We outline an alternative approach whereby site-specific accumulation models are generated to correct bias when daily sampling is impractical. PMID:24367607

  2. Genetic diversity affects the strength of population regulation in a marine fish.

    PubMed

    Johnson, D W; Freiwald, J; Bernardi, G

    2016-03-01

    Variation is an essential feature of biological populations, yet much of ecological theory treats individuals as though they are identical. This simplifying assumption is often justified by the perception that variation among individuals does not have significant effects on the dynamics of whole populations. However, this perception may be skewed by a historic focus on studying single populations. A true evaluation of the extent to which among-individual variation affects the dynamics of populations requires the study of multiple populations. In this study, we examined variation in the dynamics of populations of a live-bearing, marine fish (black surfperch; Embiotoca jacksoni). In collaboration with an organization of citizen scientists (Reef Check California), we were able to examine the dynamics of eight populations that were distributed throughout approximately 700 km of coastline, a distance that encompasses much of this species' range. We hypothesized that genetic variation within a local population would be related to the intensity of competition and to the strength of population regulation. To test this hypothesis, we examined whether genetic diversity (measured by the diversity of mitochondrial DNA haplotypes) was related to the strength of population regulation. Low-diversity populations experienced strong density dependence in population growth rates and population sizes were regulated much more tightly than they were in high-diversity populations. Mechanisms that contributed to this pattern include links between genetic diversity, habitat use, and spatial crowding. On average, low-diversity populations used less of the available habitat and exhibited greater spatial clustering (and more intense competition) for a given level of density (measured at the scale of the reef). Although the populations we studied also varied with respect to exogenous characteristics (habitat complexity, densities of predators, and interspecific competitors), none of these

  3. Determination of selenium and its compounds in marine organisms.

    PubMed

    Bryszewska, Małgorzata Anita; Måge, Amund

    2015-01-01

    In this study, we investigate the type and quantity of selenium compounds in fish and marine organisms, using ion-pair reversed phase LC–ICP-MS, developed and applied for the analysis of Atlantic cod, Atlantic salmon, Greenland halibut, Atlantic herring, blue mussel, common crab, scallop, calanus, and Euphasia super. Of the samples examined, the lowest level of selenium was found in farmed Atlantic salmon (0.17 mg Se kg(−1) dm). The total selenium extraction efficiency by phosphate buffer was 2.5 times higher in sea plankton and shellfish samples than in fish samples. Analysis of Se species in each hydrolysate obtained by proteolysis showed the presence of selenomethionine, which constituted 41.5% of the selenium compounds detected in hydrolysates of Atlantic herring and 98.4% of those in extracts of Atlantic salmon. Inorganic compounds, such as selenates and selenites, were detected mainly in sea plankton and shellfish samples (<0.13 mg Se kg(−1) wm), although no correlation was found between the presence of inorganic compounds and total selenium concentration. The accuracy of the total selenium determination was validated using a certified reference material (oyster tissue (NIST 1566b)). A lyophilised powder of cod (Gadus morhua) was used to validate speciation analysis, enzymatic hydrolysis of lyophilised powder of cod recovered 54 ± 6% of total selenium, and SeMet constituted 83.5 ± 5.28% of selenium detected in hydrolysates. The chromatographic detection limits were, respectively, 0.30 ng mL(−1), 0.43 ng mL(−1), 0.54 ng mL(−1), 0.55 ng mL(−1), 0.57 ng mL(−1) and 0.72 ng mL(−1) for selenate, selenomethionine, selenite, Se-methyl-selenocysteine, selenocystine and selenomethionine selenoxide.The data on selenium concentrations and speciation presented here could be useful in estimating levels of selenium intake by seafood consumption. PMID:25468190

  4. Oxidative pathways of chemical toxicity and oxidative stress biomarkers in marine organisms.

    PubMed

    Regoli, Francesco; Giuliani, Maria Elisa

    2014-02-01

    The antioxidant system of marine organisms consists of low molecular weight scavengers and antioxidant enzymes which interact in a sophisticated network. Environmental pollutants can unbalance this system through closely related mechanisms, indirect relationships and cascade effects acting from pre-transcriptional to catalytic levels. Chemically-mediated pathways have the potential to greatly enhance intracellular formation of reactive oxygen species (ROS); at the same time, excessive levels of oxyradicals down-regulate xenobiotics metabolism, with important environmental implications for organisms exposed to chemical mixtures. Interactions between different classes of chemicals, generation of ROS and onset of oxidative stress conditions are partly modulated by changes in levels and functions of redox-sensitive signaling proteins and transcription factors. The Nrf2-Keap1 pathway still remains largely unexplored in marine organisms, despite the elevated degree of identity and similarity with homolog transcripts and proteins from different species. Recent evidences on transcriptional up-regulation of this system are consistent with the capability to provide a prolonged expression of ARE-regulated cytoprotective genes, and to efficiently switch off this mechanism when oxidative pressure decreases. Although gene expression and catalytic activities of antioxidants are often measured as alternative biomarkers in monitoring biological effects of contaminants, conflicting results between molecular and biochemical responses are quite frequent. The links between effects occurring at various intracellular levels can be masked by non-genomic processes affecting mRNA stability and protein turnover, different timing for transcriptional and translational mechanisms, metabolic capability of tissues, post-transcriptional modifications of proteins, bi-phasic responses of antioxidant enzymes and interactions occurring in chemical mixtures. In this respect, caution should be taken in

  5. Organic geochemical characterisation of shallow marine Cretaceous formations from Yola Sub-basin, Northern Benue Trough, NE Nigeria

    NASA Astrophysics Data System (ADS)

    Sarki Yandoka, Babangida M.; Abdullah, Wan Hasiah; Abubakar, M. B.; Hakimi, Mohammed Hail; Jauro, Aliyu; Adegoke, Adebanji Kayode

    2016-05-01

    The shallow marine shales of the Cretaceous formations namely Yolde, Dukul, Jessu, Sekuliye and Numanha ranging in age from Cenomanian to Coniacian within the Yola Sub-basin in the Northern Benue Trough, northeastern Nigeria were analysed to provide an overview on their hydrocarbon generation potential. This study is based on pyrolysis analysis, total organic carbon content (TOC), extractable organic matter (EOM), biomarker distributions and measured vitrinite reflectance. The present-day TOC contents range between 0.24 and 0.71 wt. % and Hydrogen Index (HI) values between 8.7 and 113 mg HC/g TOC with Type III/IV kerogens. Based on the present-day kerogen typing, the shale sediments are expected to generate mainly gas. Biomarker compositions indicates deposition in a marine environment under suboxic conditions with prevalent contribution of aquatic organic matter and a significant amount of terrigenous organic matter input. Organic matter that is dominated by marine components contains kerogens of Type II and Type II-III. This study shows that the organic matter has been affected by volcanic intrusion and consequently, have reached post-mature stage of oil generation. These higher thermal maturities levels are consistent with the vitrinite reflectance ranging from 0.85 to 2.35 Ro % and high Tmax (440-508 °C) values as supported by biomarker maturity ratios. Based on this study, a high prospect for major gas and minor oil generation potential is anticipated from the shallow marine Cretaceous formations from Yola Sub-basin.

  6. The matrix influences direct and indirect effects of an anthropogenic disturbance on marine organisms.

    PubMed

    Mayer-Pinto, Mariana; Underwood, Antony J; Marzinelli, Ezequiel M

    2015-01-01

    The magnitude and direction of direct and indirect effects of disturbances can be context-dependent, with the matrix (surrounding habitat) in which populations are embedded either mitigating or worsening the impacts of disturbances. Chemical disturbances are particularly harmful and can affect organisms directly or indirectly. We used bleach, a common stressor in marine systems, to test hypotheses about direct and indirect effects of anthropogenic disturbances on intertidal grazers and the influence of the surrounding macro-algal matrix on such effects. We manipulated the contaminant, food (biofilm) and surrounding macro-algal matrix. Fewer limpets were found in contaminated areas. Bleach had a strong direct negative effect on limpets and caused a reduction in biofilm food, indirectly affecting limpets. This effect was strongest in the presence of macro-algal matrix. Anthropogenic disturbances can have major consequences via direct and indirect effects on key interacting species. We showed that such effects are, however, context-dependent. Capsule: Pollution is a major driver of biodiversity declines. We show that direct and indirect effects of contaminants on organisms depend on the context in which they occur. PMID:25460615

  7. Specimen banking of marine organisms in the United States: current status and long-term prospective.

    PubMed

    Becker, P R; Wise, S A; Thorsteinson, L; Koster, B J; Rowles, T

    1997-05-01

    A major part of the activities conducted over the last decade by the National Biomonitoring Specimen Bank (NBSB) has involved the archival of marine specimens collected by ongoing environmental monitoring programs. These archived specimens include bivalves, marine sediments, and fish tissues collected by the National Status and Trends and the Exxon Valdez Oil Spill Damage Assessment programs, and marine mammal tissues collected by the Marine Mammal Health and Stranding, Response Program and the Alaska Marine Mammal Tissue Archival Project. In addition to supporting these programs, the specimens have been used to investigate circumpolar patterns of chlorinated hydrocarbon concentrations, genetic separation of marine animal stocks, baseline levels of essential and nonessential elements in marine mammals, and the potential risk to human consumers in the Arctic from anthropogenic contaminants found in local subsistence foods. The NBSB specimens represent a resource that has the potential for addressing future issues of marine environmental quality and ecosystem changes through retrospective analysis; however, an ecosystem-based food web approach would maximize this potential. The current status of the NBSB activities related to the banking of marine organisms is presented and discussed, the long-term prospective of these activities is presented, and the importance of an ecosystem-based food web monitoring approach to the value of specimen banking is discussed. PMID:9159892

  8. Specimen banking of marine organisms in the United States: Current status and long-term prospective

    USGS Publications Warehouse

    Becker, P.R.; Wise, S.A.; Thorsteinson, L.; Koster, B.J.; Rowles, T.

    1997-01-01

    A major part of the activities conducted over the last decade by the National Biomonitoring Specimen Bank (NBSB) has involved the archival of marine specimens collected by ongoing environmental monitoring programs. These archived specimens include bivalves, marine sediments, and fish tissues collected by the National Status and Trends and the Exxon Valdez Oil Spill Damage Assessment programs, and marine mammal tissues collected by the Marine Mammal Health and Stranding Response Program and the Alaska Marine Mammal Tissue Archival Project. In addition to supporting these programs, the specimens have been used to investigate circumpolar patterns of chlorinated hydrocarbon concentrations, genetic separation of marine animal stocks, baseline levels of essential and nonessential elements in marine mammals, and the potential risk to human consumers in the Arctic from anthropogenic contaminants found in local subsistence foods. The NBSB specimens represent a resource that has the potential for addressing future issues of marine environmental quality and ecosystem changes through retrospective analysis; however, an ecosystem-based food web approach would maximize this potential. The current status of the NBSB activities related to the banking of marine organisms is presented and discussed, the long-term prospective of these activities is presented, and the importance of an ecosystem-based food web monitoring approach to the value of specimen banking is discussed.

  9. Factors affecting the hydrogen isotopic composition of dissolved organic matter along a salinity gradient

    NASA Astrophysics Data System (ADS)

    Debond, A. A.; Ziegler, S. E.; Fogel, M. L.; Morrill, P. L.; Bowden, R.

    2010-12-01

    The role of terrestrial dissolved organic matter (DOM) in regulating estuarine ecosystem processes is poorly understood, in part due to difficulties in tracking terrestrial DOM in marine environments. Analysis of multiple stable isotopes (C, N, S) is often required due to poor separation of the carbon isotope signatures of marine and terrestrial sources. However, hydrogen isotopes exhibit greater fractionation. Marine DOM sources have a hydrogen isotope signature of 0‰ while terrestrial DOM can have signatures of up to -270‰ at the poles. Some challenges must be addressed before hydrogen isotopes can be used to track terrestrial DOM in aquatic environments. Hydrogen isotopes may undergo exchange between water and organic matter, obscuring terrestrial signatures. Riverine discharge into marine environments introduces terrestrial DOM to water of different chemical and isotopic compositions which could influence the isotopic composition of the terrestrial DOM. We investigate the effects of changes in water isotopic composition on DOM by introducing terrestrial DOM to freshwaters of isotopic compositions up to +1000‰ for up to two months. We also use surface water samples along a salinity transect at the Salmonier Arm, Newfoundland, Canada to investigate the effects of changes in water mass conditions (pH, salinity and water isotopes) on terrestrial DOM. In addition to changes in water mass conditions, methods for isolating estuarine DOM may regulate affect its isotopic composition. Ultrafiltration (UF), a size-exclusion technique, has been shown to isolate and concentrate the largest proportion of DOM in estuarine environments. UF separates DOM into low molecular weight (LMW, <1kDa) and high molecular weight (HMW, >1kDa) fractions. However, under certain processing conditions, some LMW DOM can be retained. During desalting (diafiltration), LMW DOM continues to be removed from the concentrate, whereas HMW DOM is retained. The proportion of LMW DOM retained

  10. Latitudinal distributions of organic nitrogen and organic carbon in marine biologically influenced aerosols over the western North Pacific in summer

    NASA Astrophysics Data System (ADS)

    Miyazaki, Y.; Kawamura, K.; Jung, J.; Furutani, H.; Uematsu, M.

    2010-12-01

    Latitudinal distributions of organic nitrogen (ON) and organic carbon (OC) as well as isotopic ratios of total nitrogen (TN) and total carbon (TC) were measured in marine aerosols collected in the western North Pacific in summer 2008. Increased concentrations of methanesulfonic acid (MSA) and diethylammonium (DEA+) at 40-44N and subtropical regions (10-20N), together with averaged satellite chlorophyll a data and five-day back trajectory, suggest significant influences of marine biological activities on aerosols in these regions. In the marine biologically influenced aerosols, ON exhibited increased concentrations up to 260 ngN m-3. We found that water-insoluble organic nitrogen (WION) was the most abundant N in the marine aerosols, which accounted for 67±15% of total aerosol N. In particular, the average WION/ON ratio was as high as 0.93±0.07 at 40-44N. These results suggest that marine biological sources significantly contributed to ON, a majority of which is composed of water-insoluble fractions in the study region. The stable carbon isotopic ratios (δ13C) showed higher values (from -22‰ to -20‰) when ON/OC ratios increased from 0.15 to 0.35. The results clearly show an enrichment of nitrogen in organic aerosols originated from the oceanic region with high biological productivity and indicate preferential transfer of nitrogen-containing compounds from the sea surface to marine atmosphere. Furthermore, both WION concentrations and WION/WIOC ratios showed positive correlations with local wind speeds, suggesting that ON contributes significantly as a nutrient-affiliated element to primary marine organic aerosols over the study region. We will discuss possible chemical properties of WION including proteins and gel-like particles, and potential processes for primary and secondary production of aerosol ON.

  11. Production, Organic Characterization, and Phase Transformations of Marine Particles Aerosolized from a Laboratory Mesocosm Phytoplankton Bioreactor

    NASA Astrophysics Data System (ADS)

    Alpert, P. A.; Knopf, D. A.; Aller, J. Y.; Radway, J.; Kilthau, W.

    2012-12-01

    Previous studies have shown that particles emitted from bubble bursting and wave breaking of ocean waters with high biological activity can contain sea salts associated with organic material, with smaller particles containing a larger mass fraction of organics than larger particles. This likely indicates a link between phytoplankton productivity in oceans and particulate organic material in marine air. Once aerosolized, particles with significant amount of organic material can affect cloud activation and formation of ice crystals, among other atmospheric processes, thus influencing climate. This is significant for clouds and climate particularly over nutrient rich polar seas, in which concentrations of biological organisms can reach up to 109 cells per ml during spring phytoplankton blooms. Here we present results of bubble bursting aerosol production from a seawater mesocosm containing artificial seawater, natural seawater and unialgal cultures of three representative phytoplankton species. These phytoplankton (Thalassiosira pseudonana, Emilianaia huxleyi, and Nannochloris atomus), possessed siliceous frustules, calcareous frustules and no frustules, respectively. Bubbles were generated employing recirculating impinging water jets or glass frits. Dry and humidified aerosol size distributions and bulk aerosol organic composition were measured as a function of phytoplankton growth, and chlorophyll composition and particulate and dissolved organic carbon in the water were determined. Finally, particles were collected on substrates for ice nucleation and water uptake experiments, their elemental compositions were determined using computer controlled scanning electron microscopy and energy dispersive analysis of X-rays (CCSEMEDAX), and their carbon speciation was determined using scanning transmission X-ray microscopy and near-edge X-ray absorption fine structure spectroscopy (STXM/NEXAFS). Particle size distributions exposed to dry and humidified air employing

  12. Styrofoam Debris as a Source of Hazardous Additives for Marine Organisms.

    PubMed

    Jang, Mi; Shim, Won Joon; Han, Gi Myung; Rani, Manviri; Song, Young Kyoung; Hong, Sang Hee

    2016-05-17

    There is growing concern over plastic debris and their fragments as a carrier for hazardous substances in marine ecosystem. The present study was conducted to provide field evidence for the transfer of plastic-associated chemicals to marine organisms. Hexabromocyclododecanes (HBCDs), brominated flame retardants, were recently detected in expanded polystyrene (styrofoam) marine debris. We hypothesized that if styrofoam debris acts as a source of the additives in the marine environment, organisms inhabiting such debris might be directly influenced by them. Here we investigated the characteristics of HBCD accumulation by mussels inhabiting styrofoam. For comparison, mussels inhabiting different substrates, such as high-density polyethylene (HDPE), metal, and rock, were also studied. The high HBCD levels up to 5160 ng/g lipid weight and the γ-HBCD dominated isomeric profiles in mussels inhabiting styrofoam strongly supports the transfer of HBCDs from styrofoam substrate to mussels. Furthermore, microsized styrofoam particles were identified inside mussels, probably originating from their substrates. PMID:27100560

  13. Comparative Toxicity of Chlorinated Saline and Freshwater Wastewater Effluents to Marine Organisms.

    PubMed

    Yang, Mengting; Liu, Jiaqi; Zhang, Xiangru; Richardson, Susan D

    2015-12-15

    Toilet flushing with seawater results in saline wastewater, which may contain approximately 33-50% seawater. Halogenated disinfection byproducts (DBPs), especially brominated and iodinated DBPs, have recently been found in chlorinated saline wastewater effluents. With the occurrence of brominated and iodinated DBPs, the adverse effects of chlorinated saline wastewater effluents to marine ecology have been uncertain. By evaluating the developmental effects in the marine polychaete Platynereis dumerilii directly exposed to chlorinated saline/freshwater wastewater effluents, we found surprisingly that chlorinated saline wastewater effluents were less toxic than a chlorinated freshwater wastewater effluent. This was also witnessed by the marine alga Tetraselmis marina. The toxicity of a chlorinated wastewater effluent to the marine species was dominated by its relatively low salinity compared to the salinity in seawater. The organic matter content in a chlorinated wastewater effluent might be partially responsible for the toxicity. The adverse effects of halogenated DBPs on the marine species were observed pronouncedly only in the "concentrated" chlorinated wastewater effluents. pH and ammonia content in a wastewater effluent caused no adverse effects on the marine species. The results suggest that using seawater to replace freshwater for toilet flushing might mitigate the "direct" acute detrimental effect of wastewater to the marine organisms. PMID:26505276

  14. Lethal and sublethal effects of cadmium on marine organisms: a critical discussion about ''safety levels''

    SciTech Connect

    Sperling, K.R.

    1983-12-01

    The applicability of terms such as ''safety level'' and ''safety factor'' for the purpose of risk assessment in the frame of the marine dumping conventions is discussed. In view of a series of experiments on sublethal effects of cadmium on marine organisms it is stated that the dose-response relationships cover a range of 10(4), and that there is no indication that the lowest level found so far is actually just above a no-effect threshold.

  15. Disposition of xenobiotic chemicals and metabolites in marine organisms

    SciTech Connect

    Varanasi, U.; Stein, J.E. )

    1991-01-01

    Studies with several bottom fish species from urban waterways show that of the identified xenobiotic chemicals in bottom sediments, polycyclic aromatic hydrocarbons (PAHs) are the most strongly associated with the prevalence of liver lesions, including neoplasms. Accordingly, there is concern about the transfer of contaminants, such as PAHs, from aquatic species to humans. Because PAHs exert their toxicity only after being biotransformed, increasing attention has been focused on the ability of aquatic organisms to metabolize these chemicals. Overall, the results of both laboratory and field studies show that generally low levels of a few low molecular weight PAHs may be present in edible tissue of fish from contaminated areas and that high molecular weight PAHs, such as the carcinogen benzo(a)pyrene, will rarely be detected because of extensive metabolism. Additionally, the results from a few studies suggest that even though interactions between xenobiotics can affect both biochemical and physiological systems to alter the disposition of PAHs in fish, these interactions do not markedly change the relative proportions of metabolites to parent PAH in tissues. Thus, these studies clearly demonstrate that to obtain some insight into the questions of whether there is any risk to human health from consuming fish and crustaceans from urban areas, techniques must be developed that measure metabolites of carcinogens, such as PAHs, in edible tissue. Initial attempts may focus on semiquantitative methods that permit rapid assessment of the level of metabolites in edible tissues of fish and crustaceans from many urban areas. Based on information from such screening studies, further refinement in methodology leading to identification of specific compounds may be needed because certain metabolites may not be as toxic or carcinogenic as others.

  16. Biology, genome organization, and evolution of parvoviruses in marine shrimp.

    PubMed

    Dhar, Arun K; Robles-Sikisaka, Refugio; Saksmerprome, Vanvimon; Lakshman, Dilip K

    2014-01-01

    As shrimp aquaculture has evolved from a subsistent farming activity to an economically important global industry, viral diseases have also become a serious threat to the sustainable growth and productivity of this industry. Parvoviruses represent an economically important group of viruses that has greatly affected shrimp aquaculture. In the early 1980s, an outbreak of a shrimp parvovirus, infectious hypodermal and hematopoietic necrosis virus (IHHNV), led to the collapse of penaeid shrimp farming in the Americas. Since then, considerable progress has been made in characterizing the parvoviruses of shrimp and developing diagnostic methods aimed to preventing the spread of diseases caused by these viruses. To date, four parvoviruses are known that infect shrimp; these include IHHNV, hepatopancreatic parvovirus (HPV), spawner-isolated mortality virus (SMV), and lymphoid organ parvo-like virus. Due to the economic repercussions that IHHNV and HPV outbreaks have caused to shrimp farming over the years, studies have been focused mostly on these two pathogens, while information on SMV and LPV remains limited. IHHNV was the first shrimp virus to be sequenced and the first for which highly sensitive diagnostic methods were developed. IHHNV-resistant lines of shrimp were also developed to mitigate the losses caused by this virus. While the losses due to IHHNV have been largely contained in recent years, reports of HPV-induced mortalities in larval stages in hatchery and losses due to reduced growth have increased. This review presents a comprehensive account of the history and current knowledge on the biology, diagnostics methods, genomic features, mechanisms of evolution, and management strategies of shrimp parvoviruses. We also highlighted areas where research efforts should be focused in order to gain further insight on the mechanisms of parvoviral pathogenicity in shrimp that will help to prevent future losses caused by these viruses. PMID:24751195

  17. Disposition of xenobiotic chemicals and metabolites in marine organisms.

    PubMed Central

    Varanasi, U; Stein, J E

    1991-01-01

    Studies with several bottom fish species from urban waterways show that of the identified xenobiotic chemicals in bottom sediments, polycylic aromatic hydrocarbons (PAHs) are the most strongly associated with the prevalence of liver lesions, including neoplasms. Accordingly, there is concern about the transfer of contaminants, such as PAHs, from aquatic species to humans. Because PAHs exert their toxicity only after being biotransformed, increasing attention has been focused on the ability of aquatic organisms to metabolize these chemicals. Overall, the results of both laboratory and field studies show that generally low levels (nanograms per gram wet weight) of a few low molecular weight PAHs may be present in edible tissue of fish from contaminated areas and that high molecular weight PAHs, such as the carcinogen benzo(a)pyrene, will rarely be detected because of extensive metabolism. Additionally, the results from a few studies suggest that even though interactions between xenobiotics can affect both biochemical and physiological systems to alter the disposition of PAHs in fish, these interactions do not markedly change the relative proportions of metabolites to parent PAH in tissues. Thus, these studies clearly demonstrate that to obtain some insight into the questions of whether there is any risk to human health from consuming fish and crustaceans from urban areas, techniques must be developed that measure metabolites of carcinogens, such as PAHs, in edible tissue. Initial attempts may focus on semiquantitative methods that permit rapid assessment of the level of metabolites in edible tissues of fish and crustaceans from many urban areas.(ABSTRACT TRUNCATED AT 250 WORDS) Images FIGURE 4. FIGURE 4. FIGURE 4. PMID:2050086

  18. Molecular Characterization of Marine Organic Aerosols Collected during a Round-the-World Cruise

    NASA Astrophysics Data System (ADS)

    Fu, P.; Kawamura, K.; Miura, K.

    2010-12-01

    Total suspended particles (TSP) were collected on board the R/V Hakuho Maru during a round-the-world cruise (KH89-2) and were characterized for organic molecular compositions using solvent extraction/derivatization and gas chromatography/mass spectrometry technique. More than 140 organic species were detected in the marine aerosols and were grouped into 11 organic compound classes, including aliphatic lipids, anhydrosugars and sugar alcohols, lignin/resin acids, sterols, hopanes, polycyclic aromatic hydrocarbons, hydroxy-/polyacids, aromatic acids, as well as secondary organic aerosol (SOA) tracers from the photooxidation of biogenic volatile organic compounds. Concentrations of total quantified organics ranged from 0.94 to 98 ng m-3 (average 31 ng m-3) with higher concentrations in coastal regions (California Coast, South China Sea, and Western North Pacific) than in open marine areas (North Pacific and North Atlantic), suggesting that long-range atmospheric transport from the continents is the main source of marine organic aerosols. Isoprene SOA tracers, i.e., 2-methylglyceric acid, C5-alkene triols and 2-methyltetrols, were detected in all the samples (0.11-22 ng m-3, average 3.6 ng m-3) with higher concentrations in the tropical regions. They accounted for 0.48-29% of the total identified organics. Organic compounds were further categorized into several groups to clarify their sources. In the North Pacific and North Atlantic, secondary oxidation products (30-31%), fossil fuel combustion products (27-28%), as well as marine natural emissions (22-34%) were found as major contributors to the marine aerosols. In California Coast, North Indian Ocean and South China Sea, secondary oxidation products can contribute 44-55% of the total identified organics, followed by terrestrial natural emissions (12-27%), while biomass burning emissions were found to contribute only 1-2%. However, in the western North Pacific near the Asian continent, fossil fuel combustion (27%) and

  19. Dispersal of marine organisms and the grand challenges in biology: an introduction to the symposium.

    PubMed

    Lindsay, Sara M

    2012-10-01

    Understanding dispersal and its complex variables is critical to understanding the ecology and evolution of life histories of species, but research on dispersal tends to reflect or emphasize particular disciplines, such as population genetics, functional morphology, evolutionary and developmental biology, physiology, and biophysics, or to emphasize a particular clade or functional group (e.g., fish, planktotrophs or lecithotrophs, pelagic or benthic organisms) in marine ecosystems. The symposium on "Dispersal of Marine Organisms" assembled an interdisciplinary group of outstanding young and established speakers to address dispersal in marine organisms in order to foster integration and cross-talk among different disciplines and to identify gaps in our knowledge and suggest areas for future research. PMID:23001959

  20. Coupled ocean-atmosphere loss of marine refractory dissolved organic carbon

    NASA Astrophysics Data System (ADS)

    Kieber, David J.; Keene, William C.; Frossard, Amanda A.; Long, Michael S.; Maben, John R.; Russell, Lynn M.; Kinsey, Joanna D.; Tyssebotn, Inger Marie B.; Quinn, Patricia K.; Bates, Timothy S.

    2016-03-01

    The oceans hold a massive quantity of organic carbon, nearly all of which is dissolved and more than 95% is refractory, cycling through the oceans several times before complete removal. The vast reservoir of refractory dissolved organic carbon (RDOC) is a critical component of the global carbon cycle that is relevant to our understanding of fundamental marine biogeochemical processes and the role of the oceans in climate change with respect to long-term storage and sequestration of atmospheric carbon dioxide. Here we show that RDOC includes surface-active organic matter that can be incorporated into primary marine aerosol produced by bursting bubbles at the sea surface. We propose that this process will deliver RDOC from the sea surface to the atmosphere wherein its photochemical oxidation corresponds to a potentially important and hitherto unknown removal mechanism for marine RDOC.

  1. Antiprotozoal Activities of Organic Extracts from French Marine Seaweeds

    PubMed Central

    Vonthron-Sénécheau, Catherine; Kaiser, Marcel; Devambez, Isabelle; Vastel, Antoine; Mussio, Isabelle; Rusig, Anne-Marie

    2011-01-01

    Marine macrophytes contain a variety of biologically active compounds, some reported to have antiprotozoal activity in vitro. As a part of a screening program to search for new natural antiprotozoals, we screened hydroalcoholic and ethyl acetate extracts of 20 species of seaweeds from three phyla (Rhodophyta, Heterokontophyta and Chlorophyta), sampled along the Normandy (France) coast. We tested them in vitro against the protozoa responsible for three major endemic parasitic diseases: Plasmodium falciparum, Leishmania donovani and Trypanosoma cruzi. The selectivity of the extracts was also evaluated by testing on a mammalian cell line (L6 cells). Ethyl acetate extracts were more active than hydroalcoholic ones. Activity against T. cruzi and L. donovani was non-existent to average, but almost half the extracts showed good activity against P. falciparum. The ethyl acetate extract of Mastocarpus stellatus showed the best antiplasmodial activity as well as the best selectivity index (IC50 = 2.8 μg/mL; SI > 30). Interestingly, a red algae species, which shares phylogenetic origins with P. falciparum, showed the best antiplasmodial activity. This study is the first to report comparative antiprotozoal activity of French marine algae. Some of the species studied here have not previously been biologically evaluated. PMID:21747738

  2. DNA Extraction Protocols for Whole-Genome Sequencing in Marine Organisms.

    PubMed

    Panova, Marina; Aronsson, Henrik; Cameron, R Andrew; Dahl, Peter; Godhe, Anna; Lind, Ulrika; Ortega-Martinez, Olga; Pereyra, Ricardo; Tesson, Sylvie V M; Wrange, Anna-Lisa; Blomberg, Anders; Johannesson, Kerstin

    2016-01-01

    The marine environment harbors a large proportion of the total biodiversity on this planet, including the majority of the earths' different phyla and classes. Studying the genomes of marine organisms can bring interesting insights into genome evolution. Today, almost all marine organismal groups are understudied with respect to their genomes. One potential reason is that extraction of high-quality DNA in sufficient amounts is challenging for many marine species. This is due to high polysaccharide content, polyphenols and other secondary metabolites that will inhibit downstream DNA library preparations. Consequently, protocols developed for vertebrates and plants do not always perform well for invertebrates and algae. In addition, many marine species have large population sizes and, as a consequence, highly variable genomes. Thus, to facilitate the sequence read assembly process during genome sequencing, it is desirable to obtain enough DNA from a single individual, which is a challenge in many species of invertebrates and algae. Here, we present DNA extraction protocols for seven marine species (four invertebrates, two algae, and a marine yeast), optimized to provide sufficient DNA quality and yield for de novo genome sequencing projects. PMID:27460368

  3. Chemical ions affect survival of avian cholera organisms in pondwater

    USGS Publications Warehouse

    Price, J.I.; Yandell, B.S.; Porter, W.P.

    1992-01-01

    Avian cholera (Pasteurella multocida) is a major disease of wild waterfowl, but its epizootiology remains little understood. Consequently, we examined whether chemical ions affected survival of avian cholera organisms in water collected from the Nebraska Rainwater Basin where avian cholera is enzootic. We tested the response of P. multocida to ammonium (NH4), calcium (Ca), magnesium (Mg), nitrate (NO3), and ortho-phosphate (PO4) ions individually and in combination using a fractional factorial design divided into 4 blocks. High concentrations of Ca and Mg, singly or in combination, increased survival of P. multocida organisms (P < 0.001). We developed a survival index to predict whether or not specific ponds could be "problem" or "nonproblem" avian cholera sites based on concentrations of these ions in the water.

  4. Effects of ocean acidification on marine dissolved organic matter are not detectable over the succession of phytoplankton blooms

    PubMed Central

    Zark, Maren; Riebesell, Ulf; Dittmar, Thorsten

    2015-01-01

    Marine dissolved organic matter (DOM) is one of the largest active organic carbon reservoirs on Earth, and changes in its pool size or composition could have a major impact on the global carbon cycle. Ocean acidification is a potential driver for these changes because it influences marine primary production and heterotrophic respiration. We simulated ocean acidification as expected for a “business-as-usual” emission scenario in the year 2100 in an unprecedented long-term mesocosm study. The large-scale experiments (50 m3 each) covered a full seasonal cycle of marine production in a Swedish Fjord. Five mesocosms were artificially enriched in CO2 to the partial pressure expected in the year 2100 (900 μatm), and five more served as controls (400 μatm). We applied ultrahigh-resolution mass spectrometry to monitor the succession of 7360 distinct DOM formulae over the course of the experiment. Plankton blooms had a clear effect on DOM concentration and molecular composition. This succession was reproducible across all 10 mesocosms, independent of CO2 treatment. In contrast to the temporal trend, there were no significant differences in DOM concentration and composition between present-day and year 2100 CO2 levels at any time point of the experiment. On the basis of our results, ocean acidification alone is unlikely to affect the seasonal accumulation of DOM in productive coastal environments. PMID:26601292

  5. Effects of ocean acidification on marine dissolved organic matter are not detectable over the succession of phytoplankton blooms.

    PubMed

    Zark, Maren; Riebesell, Ulf; Dittmar, Thorsten

    2015-10-01

    Marine dissolved organic matter (DOM) is one of the largest active organic carbon reservoirs on Earth, and changes in its pool size or composition could have a major impact on the global carbon cycle. Ocean acidification is a potential driver for these changes because it influences marine primary production and heterotrophic respiration. We simulated ocean acidification as expected for a "business-as-usual" emission scenario in the year 2100 in an unprecedented long-term mesocosm study. The large-scale experiments (50 m(3) each) covered a full seasonal cycle of marine production in a Swedish Fjord. Five mesocosms were artificially enriched in CO2 to the partial pressure expected in the year 2100 (900 μatm), and five more served as controls (400 μatm). We applied ultrahigh-resolution mass spectrometry to monitor the succession of 7360 distinct DOM formulae over the course of the experiment. Plankton blooms had a clear effect on DOM concentration and molecular composition. This succession was reproducible across all 10 mesocosms, independent of CO2 treatment. In contrast to the temporal trend, there were no significant differences in DOM concentration and composition between present-day and year 2100 CO2 levels at any time point of the experiment. On the basis of our results, ocean acidification alone is unlikely to affect the seasonal accumulation of DOM in productive coastal environments. PMID:26601292

  6. New Drugs from Marine Organisms in Alzheimer’s Disease

    PubMed Central

    Russo, Patrizia; Kisialiou, Aliaksei; Lamonaca, Palma; Moroni, Rossana; Prinzi, Giulia; Fini, Massimo

    2015-01-01

    Alzheimer’s disease (AD) is a multifactorial neurodegenerative disorder. Current approved drugs may only ameliorate symptoms in a restricted number of patients and for a restricted period of time. Currently, there is a translational research challenge into identifying the new effective drugs and their respective new therapeutic targets in AD and other neurodegenerative disorders. In this review, selected examples of marine-derived compounds in neurodegeneration, specifically in AD field are reported. The emphasis has been done on compounds and their possible relevant biological activities. The proposed drug development paradigm and current hypotheses should be accurately investigated in the future of AD therapy directions although taking into account successful examples of such approach represented by Cytarabine, Trabectedin, Eribulin and Ziconotide. We review a complexity of the translational research for such a development of new therapies for AD. Bryostatin is a prominent candidate for the therapy of AD and other types of dementia in humans. PMID:26712769

  7. New Drugs from Marine Organisms in Alzheimer's Disease.

    PubMed

    Russo, Patrizia; Kisialiou, Aliaksei; Lamonaca, Palma; Moroni, Rossana; Prinzi, Giulia; Fini, Massimo

    2016-01-01

    Alzheimer's disease (AD) is a multifactorial neurodegenerative disorder. Current approved drugs may only ameliorate symptoms in a restricted number of patients and for a restricted period of time. Currently, there is a translational research challenge into identifying the new effective drugs and their respective new therapeutic targets in AD and other neurodegenerative disorders. In this review, selected examples of marine-derived compounds in neurodegeneration, specifically in AD field are reported. The emphasis has been done on compounds and their possible relevant biological activities. The proposed drug development paradigm and current hypotheses should be accurately investigated in the future of AD therapy directions although taking into account successful examples of such approach represented by Cytarabine, Trabectedin, Eribulin and Ziconotide. We review a complexity of the translational research for such a development of new therapies for AD. Bryostatin is a prominent candidate for the therapy of AD and other types of dementia in humans. PMID:26712769

  8. Marine biogenic source of atmospheric organic nitrogen in the subtropical North Atlantic.

    PubMed

    Altieri, Katye E; Fawcett, Sarah E; Peters, Andrew J; Sigman, Daniel M; Hastings, Meredith G

    2016-01-26

    Global models estimate that the anthropogenic component of atmospheric nitrogen (N) deposition to the ocean accounts for up to a third of the ocean's external N supply and 10% of anthropogenic CO2 uptake. However, there are few observational constraints from the marine atmospheric environment to validate these findings. Due to the paucity of atmospheric organic N data, the largest uncertainties related to atmospheric N deposition are the sources and cycling of organic N, which is 20-80% of total N deposition. We studied the concentration and chemical composition of rainwater and aerosol organic N collected on the island of Bermuda in the western North Atlantic Ocean over 18 mo. Here, we show that the water-soluble organic N concentration ([WSON]) in marine aerosol is strongly correlated with surface ocean primary productivity and wind speed, suggesting a marine biogenic source for aerosol WSON. The chemical composition of high-[WSON] aerosols also indicates a primary marine source. We find that the WSON in marine rain is compositionally different from that in concurrently collected aerosols, suggesting that in-cloud scavenging (as opposed to below-cloud "washout") is the main contributor to rain WSON. We conclude that anthropogenic activity is not a significant source of organic N to the marine atmosphere over the North Atlantic, despite downwind transport from large pollution sources in North America. This, in conjunction with previous work on ammonium and nitrate, leads to the conclusion that only 27% of total N deposition to the global ocean is anthropogenic, in contrast to the 80% estimated previously. PMID:26739561

  9. Marine biogenic source of atmospheric organic nitrogen in the subtropical North Atlantic

    PubMed Central

    Altieri, Katye E.; Fawcett, Sarah E.; Peters, Andrew J.; Sigman, Daniel M.; Hastings, Meredith G.

    2016-01-01

    Global models estimate that the anthropogenic component of atmospheric nitrogen (N) deposition to the ocean accounts for up to a third of the ocean’s external N supply and 10% of anthropogenic CO2 uptake. However, there are few observational constraints from the marine atmospheric environment to validate these findings. Due to the paucity of atmospheric organic N data, the largest uncertainties related to atmospheric N deposition are the sources and cycling of organic N, which is 20–80% of total N deposition. We studied the concentration and chemical composition of rainwater and aerosol organic N collected on the island of Bermuda in the western North Atlantic Ocean over 18 mo. Here, we show that the water-soluble organic N concentration ([WSON]) in marine aerosol is strongly correlated with surface ocean primary productivity and wind speed, suggesting a marine biogenic source for aerosol WSON. The chemical composition of high-[WSON] aerosols also indicates a primary marine source. We find that the WSON in marine rain is compositionally different from that in concurrently collected aerosols, suggesting that in-cloud scavenging (as opposed to below-cloud “washout”) is the main contributor to rain WSON. We conclude that anthropogenic activity is not a significant source of organic N to the marine atmosphere over the North Atlantic, despite downwind transport from large pollution sources in North America. This, in conjunction with previous work on ammonium and nitrate, leads to the conclusion that only 27% of total N deposition to the global ocean is anthropogenic, in contrast to the 80% estimated previously. PMID:26739561

  10. Iron(III)-reduction in a low-organic-carbon brackish-marine system

    SciTech Connect

    Adams, L.K.; Macquaker, J.H.S.; Marshallf, J.D.

    2006-05-15

    Siderite rhizocretions are generally considered to be an indicator of fresh-water conditions. The presence of siderite rhizocretions with a marine{delta}{sup 18}O isotope signature in the Rutland Formation, Ketton, U.K. seems to contradict this belief. Commonly, in marine settings pyrite is more prevalent than siderite because of the high concentrations of sulfate in seawater. The Rutland Formation is a fine-grained mixed carbonate-clastic succession with interbedded coals that was deposited in marginal marine conditions. Analysis of siderite revealed that it was chemically zoned, predated pyrite, and has an average {delta}{sup 18}O signature of +0.44 parts per thousand. This siderite is interpreted as having precipitated during early diagenesis from brackish to marine porewaters containing low concentrations of bioavailable organic matter. Despite the porewaters being dominantly marine, under conditions of restricted organic-matter quality and/or quantity Fe(III)-reducing bacteria can outcompete sulfate-reducing bacteria for the organic substrate, resulting in the precipitation of siderite at the expense of pyrite.

  11. Sulfate reduction and oxic respiration in marine sediments: implications for organic carbon preservation in euxinic environments

    NASA Technical Reports Server (NTRS)

    Canfield, D. E.; DeVincenzi, D. L. (Principal Investigator)

    1989-01-01

    Compilations have been made of sulfate reduction rates and oxic respiration rates over the entire range of marine sedimentation rates, and sedimentary environments, including several euxinic sites. These data show, consistent with the findings of Jorgensen (1982, Nature, 296, 643-645), that sulfate reduction and oxic respiration oxidize equal amounts of organic carbon in nearshore sediments. As sedimentation rates decrease, oxic respiration, becomes progressively more important, and in deep-sea sediments 100-1000 times more organic carbon is oxidized by oxic respiration than by sulfate reduction. By contrast, nearly as much organic carbon is oxidized by sulfate reduction in euxinic sediments as is oxidized by the sum of sulfate reduction and oxic respiration in normal marine sediments of similar deposition rate. This observation appears at odds with the enhanced preservation of organic carbon observed in euxinic sediments. However, only small reductions in (depth-integrated) organic carbon decomposition rates (compared to normal marine) are required to give both high organic carbon concentrations and enhanced carbon preservation in euxinic sediments. Lower rates of organic carbon decomposition (if only by subtle amounts) are explained by the diminished ability of anaerobic bacteria to oxidize the full suite of sedimentary organic compounds.

  12. Remote sensing and GIS for the modeling of persistent organic pollutant in the marine environment

    NASA Astrophysics Data System (ADS)

    Costanzini, S.; Teggi, S.; Bigi, A.; Ghermandi, G.

    2014-10-01

    The characterization of the marine environment plays an important role in the understanding of the dynamics affecting the transport, fate and persistence (TFP) of Persistent Organic Pollutants (POPs). This work is part of a project funded by the Ministero dell'Istruzione, dell'Università e della Ricerca. The aim of the project is the assessment of the TFP of POPs in the Mediterranean sea. The analysis will be carried out at regionalmesoscale (central Mediterranean), and at local spatial scale considering different Italian test sites (the Delta of the Po River, the Venice Lagoon and the estuary of the Rio Nocella). The first step of this work involves the implementation of GIS geodatabases for the definition of the input dataset. The geodatabases were populated with MERIS and MODIS level 2 and level 3 products of Chlorophyll-a (CHL-a), Chromophoric Dissolved Organic Matter (CDOM), Aerosol Optical Thickness (AOT), Diffuse Attenuation Coefficient (DAC), Particulate Inorganic Carbon (PIC), Particulate Organic Carbon (POC) and Sea Surface Temperature (SST). The spatial scale (central Mediterranean sea) and the reference system (Plate Carrée projection) have been imposed as a constraint for the geodatabases. Four geodatabases have been implemented, two for MODIS and two for MERIS products with a monthly, seasonal and climatological temporal scale (2002 -2013). Here, we present a first application of a methodology aimed to identify vulnerable areas to POPs accumulation and persistence. The methodology allowed to assess the spatial distribution of the CHL-a in the central Mediterranean sea. The chlorophyll concentration is related to the amount of nutrients in the water and therefore provides an indicator of the potential presence of POPs. A pilot area of 300 x 200 km located in the North Adriatic sea has been initially considered. The seasonal and climatological MODIS and MERIS CHL-a variability were retrieved and compared with in-situ forcing parameters, i.e. Po River

  13. Factors affecting marine debris deposition at French Frigate Shoals, Northwestern Hawaiian Islands Marine National Monument, 1990-2006.

    PubMed

    Morishige, Carey; Donohue, Mary J; Flint, Elizabeth; Swenson, Christopher; Woolaway, Christine

    2007-08-01

    Data on the amount and type of small debris items deposited on the beaches of the Hawaiian Islands National Wildlife Refuge Tern Island station, French Frigate Shoals were collected over 16 years. We calculated deposition rates and investigated the relationship among deposition and year, season, El Niño and La Niña events from 1990 to 2006. In total 52,442 debris items were collected with plastic comprising 71% of all items collected. Annual debris deposition varied significantly (range 1116-5195 items) but was not influenced by season. Debris deposition was significantly greater during El Niño events as compared to La Niña events. Although often deduced to influence floating marine pollution, this study provides the first quantitative evidence of the influence of El Niño/La Niña cycles on marine debris deposition. PMID:17572447

  14. Recruitment dynamics in complex life cycles. [of organisms living in marine rocky zone

    NASA Technical Reports Server (NTRS)

    Roughgarden, Jonathan; Possingham, Hugh; Gaines, Steven

    1988-01-01

    Factors affecting marine population fluctuations are discussed with particular attention given to a common barnacle species of the Pacific coast of North America. It is shown how models combining larval circulation with adult interactions can potentially forecast population fluctuations. These findings demonstrate how processes in different ecological habitats are coupled.

  15. Bridging Organizations Drive Effective Governance Outcomes for Conservation of Indonesia's Marine Systems.

    PubMed

    Berdej, Samantha M; Armitage, Derek R

    2016-01-01

    This study empirically investigates the influence of bridging organizations on governance outcomes for marine conservation in Indonesia. Conservation challenges require ways of governing that are collaborative and adaptive across boundaries, and where conservation actions are better coordinated, information flows improved, and knowledge better integrated and mobilized. We combine quantitative social network analysis and qualitative data to analyze bridging organizations and their networks, and to understand their contributions and constraints in two case studies in Bali, Indonesia. The analysis shows 1) bridging organizations help to navigate the 'messiness' inherent in conservation settings by compensating for sparse linkages, 2) the particular structure and function of bridging organizations influence governing processes (i.e., collaboration, knowledge sharing) and subsequent conservation outcomes, 3) 'bridging' is accomplished using different strategies and platforms for collaboration and social learning, and 4) bridging organizations enhance flexibility to adjust to changing marine conservation contexts and needs. Understanding the organizations that occupy bridging positions, and how they utilize their positionality in a governance network is emerging as an important determinant of successful conservation outcomes. Our findings contribute to a relatively new body of literature on bridging organizations in marine conservation contexts, and add needed empirical investigation into their value to governance and conservation in Coral Triangle nations and beyond. PMID:26794003

  16. Bridging Organizations Drive Effective Governance Outcomes for Conservation of Indonesia’s Marine Systems

    PubMed Central

    Berdej, Samantha M.; Armitage, Derek R.

    2016-01-01

    This study empirically investigates the influence of bridging organizations on governance outcomes for marine conservation in Indonesia. Conservation challenges require ways of governing that are collaborative and adaptive across boundaries, and where conservation actions are better coordinated, information flows improved, and knowledge better integrated and mobilized. We combine quantitative social network analysis and qualitative data to analyze bridging organizations and their networks, and to understand their contributions and constraints in two case studies in Bali, Indonesia. The analysis shows 1) bridging organizations help to navigate the ‘messiness’ inherent in conservation settings by compensating for sparse linkages, 2) the particular structure and function of bridging organizations influence governing processes (i.e., collaboration, knowledge sharing) and subsequent conservation outcomes, 3) ‘bridging’ is accomplished using different strategies and platforms for collaboration and social learning, and 4) bridging organizations enhance flexibility to adjust to changing marine conservation contexts and needs. Understanding the organizations that occupy bridging positions, and how they utilize their positionality in a governance network is emerging as an important determinant of successful conservation outcomes. Our findings contribute to a relatively new body of literature on bridging organizations in marine conservation contexts, and add needed empirical investigation into their value to governance and conservation in Coral Triangle nations and beyond. PMID:26794003

  17. Screening for Anti-Cancer Compounds in Marine Organisms in Oman

    PubMed Central

    Dobretsov, Sergey; Tamimi, Yahya; Al-Kindi, Mohamed A.; Burney, Ikram

    2016-01-01

    Objectives: Marine organisms are a rich source of bioactive molecules with potential applications in medicine, biotechnology and industry; however, few bioactive compounds have been isolated from organisms inhabiting the Arabian Gulf and the Gulf of Oman. This study aimed to isolate and screen the anti-cancer activity of compounds and extracts from 40 natural products of marine organisms collected from the Gulf of Oman. Methods: This study was carried out between January 2012 and December 2014 at the Sultan Qaboos University, Muscat, Oman. Fungi, bacteria, sponges, algae, soft corals, tunicates, bryozoans, mangrove tree samples and sea cucumbers were collected from seawater at Marina Bandar Al-Rowdha and Bandar Al-Khayran in Oman. Bacteria and fungi were isolated using a marine broth and organisms were extracted with methanol and ethyl acetate. Compounds were identified from spectroscopic data. The anti-cancer activity of the compounds and extracts was tested in a Michigan Cancer Foundation (MCF)-7 cell line breast adenocarcinoma model. Results: Eight pure compounds and 32 extracts were investigated. Of these, 22.5% showed strong or medium anti-cancer activity, with malformin A, kuanoniamine D, hymenialdisine and gallic acid showing the greatest activity, as well as the soft coral Sarcophyton sp. extract. Treatment of MCF-7 cells at different concentrations of Sarcophyton sp. extracts indicated the induction of concentration-dependent cell death. Ultrastructural analysis highlighted the presence of nuclear fragmentation, membrane protrusion, blebbing and chromatic segregation at the nuclear membrane, which are typical characteristics of cell death by apoptosis induction. Conclusion: Some Omani marine organisms showed high anti-cancer potential. The efficacy, specificity and molecular mechanisms of anti-cancer compounds from Omani marine organisms on various cancer models should be investigated in future in vitro and in vivo studies. PMID:27226907

  18. Structure and mechanical properties of selected protective systems in marine organisms.

    PubMed

    Naleway, Steven E; Taylor, Jennifer R A; Porter, Michael M; Meyers, Marc A; McKittrick, Joanna

    2016-02-01

    Marine organisms have developed a wide variety of protective strategies to thrive in their native environments. These biological materials, although formed from simple biopolymer and biomineral constituents, take on many intricate and effective designs. The specific environmental conditions that shape all marine organisms have helped modify these materials into their current forms: complete hydration, and variation in hydrostatic pressure, temperature, salinity, as well as motion from currents and swells. These conditions vary throughout the ocean, being more consistent in the pelagic and deep benthic zones while experiencing more variability in the nearshore and shallows (e.g. intertidal zones, shallow bays and lagoons, salt marshes and mangrove forests). Of note, many marine organisms are capable of migrating between these zones. In this review, the basic building blocks of these structural biological materials and a variety of protective strategies in marine organisms are discussed with a focus on their structure and mechanical properties. Finally, the bioinspired potential of these biological materials is discussed. PMID:26652472

  19. 40 CFR Table 2 to Subpart II of... - Volatile Organic HAP (VOHAP) Limits for Marine Coatings

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... (Surface Coating) Pt. 63, Subpt. II, Table 2 Table 2 to Subpart II of Part 63—Volatile Organic HAP (VOHAP) Limits for Marine Coatings Coating category VOHAP limits a b c Grams/liter coating (minus water and... VOHAP limits expressed in units of mass of VOHAP per volume of coating assuming the coatings contain...

  20. 40 CFR Table 2 to Subpart II of... - Volatile Organic HAP (VOHAP) Limits for Marine Coatings

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... (Surface Coating) Pt. 63, Subpt. II, Table 2 Table 2 to Subpart II of Part 63—Volatile Organic HAP (VOHAP) Limits for Marine Coatings Coating category VOHAP limits a,b,c Grams/liter coating (minus water and... VOHAP limits expressed in units of mass of VOHAP per volume of coating assuming the coatings contain...

  1. OVERVIEW OF SAFETY OF MICROBIAL INSECTICIDES TO ESTUARINE AND MARINE ORGANISMS

    EPA Science Inventory

    The chapter presents an overview of safety tests of microbial insecticides to estuarine and marine organisms that have been performed to date. Approaches and experimental design, species of MPCAs tested, systems used, and endpoints and results evaluated for determination of risks...

  2. Demonstrating the Effects of Ocean Acidification on Marine Organisms to Support Climate Change Understanding

    ERIC Educational Resources Information Center

    Kelley, Amanda L.; Hanson, Paul R.; Kelley, Stephanie A.

    2015-01-01

    Ocean acidification, a product of CO[subscript 2] absorption by the world's oceans, is largely driven by the anthropogenic combustion of fossil fuels and has already lowered the pH of marine ecosystems. Organisms with calcium carbonate shells and skeletons are especially susceptible to increasing environmental acidity due to reduction in the…

  3. PETROLEUM HYDROCARBONS AND THEIR EFFECTS ON MARINE ORGANISMS, POPULATIONS, COMMUNITIES, AND ECOSYSTEMS

    EPA Science Inventory

    Analysis of available data from bioassays conducted on adult stages of a wide variety of marine organisms reveals lethal effects from soluble fractions of petroleum and petroleum products. Strict control is suggested for oil development and related activities in certain shallow, ...

  4. Marine Organisms in the Classroom. Project CAPE [Teaching Module] SC1.

    ERIC Educational Resources Information Center

    Hampton, Carolyn H.; Weston, Toni

    Nine lessons which involve the use of marine organisms in the classroom are presented in this seventh-grade biology unit. The unit offers instructors alternative ways of meeting common life science goals. It is not meant to be an extra curriculum added to the normal course load, but was developed to consolidate a group of activities designed for…

  5. The Contribution of Marine Organics to the Air Quality of the Western United States

    EPA Science Inventory

    The contribution of marine organic emissions to the air quality in coastal areas of the western United States is studied using the latest version of the US Environmental Protection Agency (EPA) regional-scale Community Multiscale Air Quality (CMAQv4.7) modeling system. Emissions ...

  6. Quantifying the degradation of organic matter in marine sediments: A review and synthesis

    NASA Astrophysics Data System (ADS)

    Arndt, Sandra; Jørgensen, B. B.; LaRowe, D. E.; Middelburg, J. J.; Pancost, R. D.; Regnier, P.

    2013-08-01

    Quantifying the rates of biogeochemical processes in marine sediments is essential for understanding global element cycles and climate change. Because organic matter degradation is the engine behind benthic dynamics, deciphering the impact that various forces have on this process is central to determining the evolution of the Earth system. Therefore, recent developments in the quantitative modeling of organic matter degradation in marine sediments are critically reviewed. The first part of the review synthesizes the main chemical, biological and physical factors that control organic matter degradation in sediments while the second part provides a general review of the mathematical formulations used to model these processes and the third part evaluates their application over different spatial and temporal scales. Key transport mechanisms in sedimentary environments are summarized and the mathematical formulation of the organic matter degradation rate law is described in detail. The roles of enzyme kinetics, bioenergetics, temperature and biomass growth in particular are highlighted. Alternative model approaches that quantify the degradation rate constant are also critically compared. In the third part of the review, the capability of different model approaches to extrapolate organic matter degradation rates over a broad range of temporal and spatial scales is assessed. In addition, the structure, functions and parameterization of more than 250 published models of organic matter degradation in marine sediments are analyzed. The large range of published model parameters illustrates the complex nature of organic matter dynamics, and, thus, the limited transferability of these parameters from one site to another. Compiled model parameters do not reveal a statistically significant correlation with single environmental characteristics such as water depth, deposition rate or organic matter flux. The lack of a generic framework that allows for model parameters to be

  7. Factors influencing cadmium accumulation and its toxicity to marine organisms

    PubMed Central

    Engel, David W.; Fowler, Bruce A.

    1979-01-01

    The toxicity of dissolved cadmium to a variety of marine animals has been found to be related to salinity, with decreased toxicity observed at higher salinities. Recent data from our laboratory have demonstrated that the toxicity of cadmium to estuarine shrimp and larval fish is a function of free cadmium ion concentration, which in turn is controlled by the chloride concentration of the water. As the chloride concentration (i.e., salinity of the water) increases, the concentration of free cadmium ion decreases relative to total dissolved metal, due to its complexation with chloride ions. These observations have been given further support by measurements involving the uptake of 115mCd by shrimp which showed that accumulation of 115mCd and chloride concentration also are inversely related. Experiments also have been conducted on the physiological effects of cadmium on the respiration of excised oyster gill tissue. Although tissues from oysters exposed for 14 days to 0.1 ppm total dissolved cadmium accumulated significant quantities of metal, no measurable effects on respiration rates were detected. Higher doses (0.3 and 0.6 ppm) caused both mortalities of oysters and accelerated respiration of excised oyster gill. Exposure to 0.1 ppm cadmium also caused the induction of and/or increased binding of cadmium to a specific low molecular weight protein in oysters. This protein appeared to have a detoxification function at low cadmium exposure levels, but in animals exposed to 0.6 ppm cadmium the induction mechanism apparently became saturated, allowing the excess cadmium to bind critical sites with resultant damage. PMID:488052

  8. The accumulation of radiocesium in coarse marine sediment: effects of mineralogy and organic matter.

    PubMed

    Kim, Yeongkyoo; Kim, Kangjoo; Kang, Hee-Dong; Kim, Wan; Doh, Si-Hong; Kim, Do-Sung; Kim, Byoung-Ki

    2007-09-01

    The controlling factors affecting the accumulation of (137)Cs in marine sediment have not been investigated in detail, especially in coarse grained sediment. Eighty eight coarse marine sediment samples near Wuljin, Korea, were characterized by quantitative X-ray-diffraction (XRD), gamma-ray, and total organic carbon (TOC) analysis. Those factors were then compared. The grain size was in the range of -0.48 to 3.6Mdphi corresponding to sand grains. TOC content was in the range of 0.06-1.75%, and the concentration of (137)Cs was organic carbon are the most important factors controlling (137)Cs fixation. The combined effect of biotite and TOC for (137)Cs fixation was also confirmed by multiple regression analysis ((137)Cs activity=1.712.TOC (wt%)+0.202.biotite (wt%)-0.097; R(2)=0.819). The regressed slopes indicated that the (137)Cs-adsorption capacity of TOC was about 8.5 times higher than that of biotite. However, the amount of (137)Cs adsorbed onto biotite was 30% more than that adsorbed onto TOC due to much greater biotite content in the sediment. The role of biotite in fixing (137)Cs becomes more important in sediment with coarser grains, containing little TOC. PMID:17663995

  9. Environmental occurrence and ecological risk assessment of organic UV filters in marine organisms from Hong Kong coastal waters.

    PubMed

    Sang, Ziye; Leung, Kelvin Sze-Yin

    2016-10-01

    Organic UV filters, now considered to be emerging contaminants in aquatic ecosystems, are being intensively tracked in environmental waters worldwide. However, their environmental fate and impact of these contaminants on marine organisms remains largely unknown, especially in Asia. This work elucidates the occurrence and the ecological risks of seven UV filters detected in farmed fish, wild mussels and some other wild organisms collected from local mariculture farms in Hong Kong. For all of the organisms, ethylhexyl methoxycinnamate (EHMC) and octyl dimethyl p-aminobenzoic acid (OD-PABA) were the predominant contaminants with the highest concentrations up to 51.3 and 24.1ng/g (dw), respectively; lower levels were found for benzophenone-8 (BP-8), octocrylene (OC) and benzophenone-3 (BP-3) from marine aquatic environment was carried out. The risk quotient (RQ) values of EHMC and BP-3 were calculated as 3.29 and 2.60, respectively, indicating these two UV filters may pose significant risks to the marine aquatic environment. PMID:27235899

  10. Ecology of conflict: marine food supply affects human-wildlife interactions on land.

    PubMed

    Artelle, Kyle A; Anderson, Sean C; Reynolds, John D; Cooper, Andrew B; Paquet, Paul C; Darimont, Chris T

    2016-01-01

    Human-wildlife conflicts impose considerable costs to people and wildlife worldwide. Most research focuses on proximate causes, offering limited generalizable understanding of ultimate drivers. We tested three competing hypotheses (problem individuals, regional population saturation, limited food supply) that relate to underlying processes of human-grizzly bear (Ursus arctos horribilis) conflict, using data from British Columbia, Canada, between 1960-2014. We found most support for the limited food supply hypothesis: in bear populations that feed on spawning salmon (Oncorhynchus spp.), the annual number of bears/km(2) killed due to conflicts with humans increased by an average of 20% (6-32% [95% CI]) for each 50% decrease in annual salmon biomass. Furthermore, we found that across all bear populations (with or without access to salmon), 81% of attacks on humans and 82% of conflict kills occurred after the approximate onset of hyperphagia (July 1(st)), a period of intense caloric demand. Contrary to practices by many management agencies, conflict frequency was not reduced by hunting or removal of problem individuals. Our finding that a marine resource affects terrestrial conflict suggests that evidence-based policy for reducing harm to wildlife and humans requires not only insight into ultimate drivers of conflict, but also management that spans ecosystem and jurisdictional boundaries. PMID:27185189

  11. Ecology of conflict: marine food supply affects human-wildlife interactions on land

    PubMed Central

    Artelle, Kyle A.; Anderson, Sean C.; Reynolds, John D.; Cooper, Andrew B.; Paquet, Paul C.; Darimont, Chris T.

    2016-01-01

    Human-wildlife conflicts impose considerable costs to people and wildlife worldwide. Most research focuses on proximate causes, offering limited generalizable understanding of ultimate drivers. We tested three competing hypotheses (problem individuals, regional population saturation, limited food supply) that relate to underlying processes of human-grizzly bear (Ursus arctos horribilis) conflict, using data from British Columbia, Canada, between 1960–2014. We found most support for the limited food supply hypothesis: in bear populations that feed on spawning salmon (Oncorhynchus spp.), the annual number of bears/km2 killed due to conflicts with humans increased by an average of 20% (6–32% [95% CI]) for each 50% decrease in annual salmon biomass. Furthermore, we found that across all bear populations (with or without access to salmon), 81% of attacks on humans and 82% of conflict kills occurred after the approximate onset of hyperphagia (July 1st), a period of intense caloric demand. Contrary to practices by many management agencies, conflict frequency was not reduced by hunting or removal of problem individuals. Our finding that a marine resource affects terrestrial conflict suggests that evidence-based policy for reducing harm to wildlife and humans requires not only insight into ultimate drivers of conflict, but also management that spans ecosystem and jurisdictional boundaries. PMID:27185189

  12. CYSTIC FIBROSIS: AN INHERITED DISEASE AFFECTING MUCIN-PRODUCING ORGANS

    PubMed Central

    Ehre, Camille; Ridley, Caroline; Thornton, David J

    2014-01-01

    Our current understanding of cystic fibrosis (CF) has revealed that the biophysical properties of mucus play a considerable role in the pathogenesis of the disease in view of the fact that most mucus-producing organs are affected in CF patients. In this review, we discuss the potential causal relationship between altered cystic fibrosis transmembrane conductance regulator (CFTR) function and the production of mucus with abnormal biophysical properties in the intestine and lungs, highlighting what has been learned from cell cultures and animal models that mimic CF pathogenesis. A similar cascade of events, including mucus obstruction, infection and inflammation, is common to all epithelia affected by impaired surface hydration. Hence, the main structural components of mucus, namely the polymeric, gel-forming mucins, are critical to the onset of the disease. Defective CFTR leads to epithelial surface dehydration, altered pH/electrolyte composition and mucin concentration. Further, it can influence mucin transition from the intracellular to extracellular environment, potentially resulting in aberrant mucus gel formation. While defective HCO3− production has long been identified as a feature of CF, it has only recently been considered as a key player in the transition phase of mucins. We conclude by examining the influence of mucins on the biophysical properties of CF sputum and discuss existing and novel therapies aimed at removing mucus from the lungs. PMID:24685676

  13. Atmospheric Water Soluble Organic Nitrogen (WSON) over marine environments: a global perspective

    NASA Astrophysics Data System (ADS)

    Violaki, K.; Sciare, J.; Williams, J.; Baker, A. R.; Martino, M.; Mihalopoulos, N.

    2014-07-01

    To obtain a comprehensive picture on the spatial distribution of water soluble organic nitrogen (WSON) in marine aerosols, samples were collected during research cruises in the tropical and south Atlantic Ocean and during a one year period (2005) over the southern Indian Ocean (Amsterdam island). Samples have been analyzed for both organic and inorganic forms of nitrogen and the factors controlling their levels have been examined. Fine mode WSON was found to play a significant role in the remote marine atmosphere with enhanced biogenic activity, with concentrations of WSON (11.3 ± 3.3 nmol N m-3) accounting for about 84% of the total dissolved nitrogen (TDN). Such levels are similar to those observed in the polluted marine atmosphere of the eastern Mediterranean (11.6 ± 14.0 nmol N m-3). Anthropogenic activities were found to be an important source of atmospheric WSON as evidenced by the ten times higher levels in the Northern Hemisphere (NH) than in the remote Southern Hemisphere (SH). Furthermore, the higher contribution of WSON to TDN (40%) in the SH, compared to the NH (20%), underlines the important role of organic nitrogen in remote marine areas. Finally, Sahara dust was also identified as a significant source of WSON in the coarse mode aerosols of the NH.

  14. Atmospheric water-soluble organic nitrogen (WSON) over marine environments: a global perspective

    NASA Astrophysics Data System (ADS)

    Violaki, K.; Sciare, J.; Williams, J.; Baker, A. R.; Martino, M.; Mihalopoulos, N.

    2015-05-01

    To obtain a comprehensive picture of the spatial distribution of water-soluble organic nitrogen (WSON) in marine aerosols, samples were collected during research cruises in the tropical and southern Atlantic Ocean and also in the southern Indian Ocean (Amsterdam Island) for a 1-year period (2005). Samples were analyzed for both organic and inorganic forms of nitrogen, and the factors controlling their levels were examined. Fine-mode WSON was found to play a significant role in the remote marine atmosphere with enhanced biogenic activity, with concentrations of WSON (11.3 ± 3.3 nmol N m-3) accounting for about 84 % of the total dissolved nitrogen (TDN). Such concentrations are similar to those observed in the polluted marine atmosphere of the eastern Mediterranean (11.6 ± 14.0 nmol N m-3). Anthropogenic activities were found to be an important source of atmospheric WSON as evidenced by the levels in the Northern Hemisphere (NH) being 10 times higher than in the remote Southern Hemisphere (SH). Furthermore, the higher contribution of fine-mode WSON to TDN (51%) in the SH, compared to the NH (13%), underlines the important role of organic nitrogen in remote marine areas. Finally, there was a strong association of WSON with dust in coarse-mode aerosols in the NH.

  15. Chemical characterization of high molecular weight dissolved organic matter in fresh and marine waters

    NASA Astrophysics Data System (ADS)

    Repeta, Daniel J.; Quan, Tracy M.; Aluwihare, Lihini I.; Accardi, AmyMarie

    2002-03-01

    The high molecular weight fraction of dissolved organic matter in a suite of lakes, rivers, seawater, and marine sediment interstitial water samples was collected by ultrafiltration and characterized by molecular level and spectroscopic techniques. Proton nuclear magnetic resonance spectra of all samples show a high degree of similarity, with major contributions from carbohydrates, bound acetate, and lipids. Molecular level analyses of neutral sugars show seven monosaccharides, rhamnose, fucose, arabinose, xylose, mannose, glucose, and galactose, to be abundant, and to occur in comparable relative amounts in each sample. Previous studies have emphasized the distinctive composition of dissolved humic substances in fresh and marine waters, and have attributed these differences to sources and transformations of organic matter unique to each environment. In contrast we find a large fraction of freshwater high molecular weight dissolved organic matter (HMWDOM; > 1kD) to be indistinguishable from marine HMWDOM in bulk and molecular-level chemical properties. Aquatic HMWDOM is similar in chemical composition to biologically derived acylated heteropolysaccharides isolated from marine algal cultures, suggesting a biological source for some fraction of persistent HMWDOM. High molecular weight DOC contributes 51 ± 26% of the total DOC, and monosaccharides 18 ± 8% of the total HMWDOC in our freshwater samples. These contributions are on average higher and more variable, but not significantly different than for surface seawater (30% and 16% respectively). Biogeochemical processes that produce, accumulate, and recycle DOM may therefore share important similarities and be broadly comparable across a range of environmental settings.

  16. Initial pH of medium affects organic acids production but do not affect phosphate solubilization

    PubMed Central

    Marra, Leandro M.; de Oliveira-Longatti, Silvia M.; Soares, Cláudio R.F.S.; de Lima, José M.; Olivares, Fabio L.; Moreira, Fatima M.S.

    2015-01-01

    The pH of the culture medium directly influences the growth of microorganisms and the chemical processes that they perform. The aim of this study was to assess the influence of the initial pH of the culture medium on the production of 11 low-molecular-weight organic acids and on the solubilization of calcium phosphate by bacteria in growth medium (NBRIP). The following strains isolated from cowpea nodules were studied: UFLA03-08 (Rhizobium tropici), UFLA03-09 (Acinetobacter sp.), UFLA03-10 (Paenibacillus kribbensis), UFLA03-106 (Paenibacillus kribbensis) and UFLA03-116 (Paenibacillus sp.). The strains UFLA03-08, UFLA03-09, UFLA03-10 and UFLA03-106 solubilized Ca3(PO4)2 in liquid medium regardless of the initial pH, although without a significant difference between the treatments. The production of organic acids by these strains was assessed for all of the initial pH values investigated, and differences between the treatments were observed. Strains UFLA03-09 and UFLA03-10 produced the same acids at different initial pH values in the culture medium. There was no correlation between phosphorus solubilized from Ca3(PO4)2 in NBRIP liquid medium and the concentration of total organic acids at the different initial pH values. Therefore, the initial pH of the culture medium influences the production of organic acids by the strains UFLA03-08, UFLA03-09, UFLA03-10 and UFLA03-106 but it does not affect calcium phosphate solubilization. PMID:26273251

  17. Initial pH of medium affects organic acids production but do not affect phosphate solubilization.

    PubMed

    Marra, Leandro M; de Oliveira-Longatti, Silvia M; Soares, Cláudio R F S; de Lima, José M; Olivares, Fabio L; Moreira, Fatima M S

    2015-06-01

    The pH of the culture medium directly influences the growth of microorganisms and the chemical processes that they perform. The aim of this study was to assess the influence of the initial pH of the culture medium on the production of 11 low-molecular-weight organic acids and on the solubilization of calcium phosphate by bacteria in growth medium (NBRIP). The following strains isolated from cowpea nodules were studied: UFLA03-08 (Rhizobium tropici), UFLA03-09 (Acinetobacter sp.), UFLA03-10 (Paenibacillus kribbensis), UFLA03-106 (Paenibacillus kribbensis) and UFLA03-116 (Paenibacillus sp.). The strains UFLA03-08, UFLA03-09, UFLA03-10 and UFLA03-106 solubilized Ca3(PO4)2 in liquid medium regardless of the initial pH, although without a significant difference between the treatments. The production of organic acids by these strains was assessed for all of the initial pH values investigated, and differences between the treatments were observed. Strains UFLA03-09 and UFLA03-10 produced the same acids at different initial pH values in the culture medium. There was no correlation between phosphorus solubilized from Ca3(PO4)2 in NBRIP liquid medium and the concentration of total organic acids at the different initial pH values. Therefore, the initial pH of the culture medium influences the production of organic acids by the strains UFLA03-08, UFLA03-09, UFLA03-10 and UFLA03-106 but it does not affect calcium phosphate solubilization. PMID:26273251

  18. Temperature change affected groundwater quality in a confined marine aquifer during long-term heating and cooling.

    PubMed

    Saito, Takeshi; Hamamoto, Shoichiro; Ueki, Takashi; Ohkubo, Satoshi; Moldrup, Per; Kawamoto, Ken; Komatsu, Toshiko

    2016-05-01

    Global warming and urbanization together with development of subsurface infrastructures (e.g. subways, shopping complexes, sewage systems, and Ground Source Heat Pump (GSHP) systems) will likely cause a rapid increase in the temperature of relatively shallow groundwater reservoirs (subsurface thermal pollution). However, potential effects of a subsurface temperature change on groundwater quality due to changed physical, chemical, and microbial processes have received little attention. We therefore investigated changes in 34 groundwater quality parameters during a 13-month enhanced-heating period, followed by 14 months of natural or enhanced cooling in a confined marine aquifer at around 17 m depth on the Saitama University campus, Japan. A full-scale GSHP test facility consisting of a 50 m deep U-tube for circulating the heat-carrying fluid and four monitoring wells at 1, 2, 5, and 10 m from the U-tube were installed, and groundwater quality was monitored every 1-2 weeks. Rapid changes in the groundwater level in the area, especially during the summer, prevented accurate analyses of temperature effects using a single-well time series. Instead, Dual-Well Analysis (DWA) was applied, comparing variations in subsurface temperature and groundwater chemical concentrations between the thermally-disturbed well and a non-affected reference well. Using the 1 m distant well (temperature increase up to 7 °C) and the 10 m distant well (non-temperature-affected), the DWA showed an approximately linear relationships for eight components (B, Si, Li, dissolved organic carbon (DOC), Mg(2+), NH4(+), Na(+), and K(+)) during the combined 27 months of heating and cooling, suggesting changes in concentration between 4% and 31% for a temperature change of 7 °C. PMID:26938497

  19. The role of marine organic ice nuclei in a global climate model

    NASA Astrophysics Data System (ADS)

    Hummel, Matthias; Egill Kristjansson, Jon

    2016-04-01

    Ice particle concentrations are a key parameter for cold clouds, exerting a strong influence on cloud lifetime, precipitation release, and the cloud radiative effect. The availability of ice-nucleating particles (INPs) and the temperature range in which they become activated determine the rate of ice formation in clouds (Hoose und Möhler, 2012). Particles from marine sources may contribute to ice formation in clouds, as they are abundant in the atmosphere and some of them have been found to be ice-nucleating active, but the extent of their influence on clouds is not known (Wilson et al., 2015). Wilson et al. (2015) collected marine INPs from the sea surface microlayer and analyzed their ice nucleation efficiency with a cold stage. Even in cirrus clouds, marine INPs may play a role, as their ice nucleation surface site density as a function of RHice at -40° C has been shown to be larger than for mineral dusts (ATD, kaolinite, and feldspar). In this study, we test the influence of marine organic aerosols on clouds via immersion freezing with the earth system model NorESM2 (Version 2 of the Norwegian Earth System Model; Bentsen et al., 2013). The model is based on the Community Earth System Model (CESM1.2) and its atmospheric part (CAM5 Oslo) is based on the Community Atmosphere Model (CAM5.3). The parameterization of ice nucleation of marine INPs is expressed as an exponential function of temperature multiplied by the total organic content. Marine organic aerosols are part of the sea spray aerosol and are ejected during bubble bursting. INPs are associated with exudates or other macromolecules mainly from diatoms. Hence, their concentration is related to the sea salt aerosols in the model simulation. Our first results indicate that the high marine INP concentrations at around 850 hPa occur at high latitudes. These regions have low mineral dust concentrations, which might increase the influence of marine INP on clouds. However, they do not coincide with regions of

  20. A note on the relationships between organic matter and some geotechnical properties of a marine sediment

    USGS Publications Warehouse

    1986-01-01

    Comparing the results of regression analyses from this and several similar studies shows that although there is good qualitative agreement, there are quantitative inconsistencies. In particular there is considerable overall variability in the regression coefficients. Among studies on marine sediments the inconsistencies are less pronounced, yet still evident. The increase in liquid limit as organic carbon increased by 1 % sediment dry weight ranged from 9 to 28% water content; in the plastic limit the range was from 4 to 18%. However, in these marine studies regression coefficients are relatively close in value in some cases, levels of significance of the regressions are high in most cases, and in all cases the relationships appear to be linear over the range of organic carbon percentage studied. Finally, we believe that a relatively clear relationship between plasticity and organic carbon begins to emerge when the latter exceeds a value of 2%.

  1. Toxicity of chlorine dioxide to early life stages of marine organisms

    SciTech Connect

    Hose, J.E.; Di Fiore, D.; Parker, H.S.; Sciarrotta, T.

    1989-03-01

    With increasing interest in minimizing exposure to chlorine, many electric generating and water treatment plants are exploring the use of alternative biocides such as chlorine dioxide. Unlike chlorine, chlorine dioxide does not react with ambient organic compounds to form potentially carcinogenic trihalomethanes such as chloroform. However, the toxicity of chlorine dioxide to aquatic organisms has received little study. No information exists on chlorine toxicity to marine organisms. Furthermore, West Coast electric power stations usually discharge chlorine intermittently once or twice daily and substantial mixing of receiving water occurs between treatments. Therefore, this study sought to obtain information on chlorine dioxide toxicity using an exposure schedule typical of generating stations which discharge into the marine environment. Early life history stages of a plant, invertebrate and fish were tested since these stages are generally acknowledged to be most sensitive to toxicants and are the stages that are most likely to be exposed to the effluent.

  2. The chemical composition of organic nitrogen in marine rainwater and aerosols

    NASA Astrophysics Data System (ADS)

    Altieri, K. E.; Hastings, M. G.; Peters, A.; Sigman, D. M.

    2010-12-01

    The current state of knowledge on organic nitrogen in the atmosphere is very limited. Atmospheric water soluble organic nitrogen (WSON) is a subset of the complex water soluble organic matter measured in atmospheric aerosols and rainwater; as such, it impacts cloud condensation processes and aerosol chemical and optical properties. In marine and continental atmospheric deposition, the organic N fraction can be 20-80% of total N potentially influencing receiving ecosystems. Therefore, atmospheric WSON plays an important role in both atmospheric chemistry and the global biogeochemical N cycle. However, the sources (i.e., anthropogenic vs. terrestrial vs. marine), composition (e.g., reduced or oxidized N), potential connections to inorganic N (NO3- and NH4+), and spatio-temporal variability of atmospheric WSON are largely unknown. Samples were collected on or near the island of Bermuda (32.27°N, 64.87°W), which is located in the western North Atlantic and experiences seasonal changes in transport that allow for study of both anthropogenically and primarily marine influenced air masses. Rainwater samples (n=7) and aqueous extracted aerosol samples (n=4) were analyzed by positive ion ultra-high resolution electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry (ESI FT-ICR MS) to characterize the chemical composition of the water soluble organic N on a per compound level. We found ~ 800 N containing compounds in 8 compound classes. The CHON+ compound class contained the largest number of N compounds (~ 460). Compared to continental rainwater [Altieri et al., ES&T, 2009], the CHON+ compounds in the marine samples are as dominant in number, yet have less regular patterns and lower O:C ratios for comparable N:C ratios. In fact, average O:C ratios of all N containing compound classes were lower in the marine samples than in continental rainwater samples. No organosulfates or nitrooxy-organosulfates were detected in the marine samples, both of

  3. The Impacts of Marine Organic Emissions on Atmospheric Chemistry and Climate (Invited)

    NASA Astrophysics Data System (ADS)

    Meskhidze, N.; Gantt, B.

    2013-12-01

    Using laboratory studies and global/regional climate model results, this talk will contribute to two main research questions: 1) what can be learned about the carbon emission inducing stress factors for marine algae, and 2) what is a potential impact of marine biogenic volatile organic compound (VOC) emissions on global atmospheric chemistry and climate. Marine photosynthetic organisms emit VOCs which can form secondary organic aerosols (SOA). Currently large uncertainty exists in the magnitude of the marine biogenic sources, their spatiotemporal distribution, controlling factors, and contributions to natural background of organic aerosols. Here laboratory results for the production of isoprene and four monoterpene (α-pinene, β-pinene, camphene and d-limonene) compounds as a function of variable light and temperature regimes for 6 different phytoplankton species will be discussed. The experiment was designed to simulate the regions where phytoplankton is subjected to changeable light/temperature conditions. The samples were grown and maintained at a climate controlled room. VOCs accumulated in the water and headspace above the water were measured by passing the sample through a gas chromatography/mass system equipped with a sample pre-concentrator allowing detection of low ppt levels of hydrocarbons. The VOC production rates were distinctly different for light/temperature stressed (the first 12 hour cycle at light/temperature levels higher than what the cultures were acclimated to in a climate controlled room) and photo/temperature-acclimated (the second 12 hour light/temperature cycle) states. In general, all phytoplankton species showed a rapid increase in isoprene and monoterpene production at higher light levels (between 150 to 420 μE m-2 s-1) until a constant production rate was reached. Isoprene and α-pinene, production rates also increased with temperature until a certain level, after which the rates declined as temperature increased further. Two

  4. Mumbai harbour, India: gateway for introduction of marine organisms.

    PubMed

    Gaonkar, C A; Sawant, S S; Anil, A C; Venkat, K; Harkantra, S N

    2010-04-01

    Ships have been identified as one of the important vectors in the translocation of organisms from one bioregion to another leading to bioinvasion. In this context, harbours serve as a gateway for the introduction of alien species. Surveys were carried out in the vicinity of ports of Mumbai for macrobenthic fauna, zooplankton and hard substratum community on three different occasions during 2001-2002. The study shows that 14 polychaete species are recently introduced to this area. Mytilopsis sallei, a bivalve, which is an invasive species in the Indian context continued to be present but was restricted to enclosed docks, indicating preference for embayed water bodies. The polychaete Protula tubularia was abundant in the hard substratum community and is being reported as a possible ship-mediated introduction. PMID:19357981

  5. Bis and tris indole alkaloids from marine organisms: new leads for drug discovery.

    PubMed

    Gupta, Leena; Talwar, Archna; Chauhan, Prem M S

    2007-01-01

    The marine organisms are a rich source of varied natural products with unique functionality. Marine natural products chemistry has undergone an explosive growth during the past three decades. A variety of natural products of new molecular structures with diverse biological activities have been reported from marine flora and fauna, thus ensuring motivation in the search of newer natural products. The bis and trisindole alkaloids are a class of marine natural products that show unique promise in the development of new drug leads. 3-hydroxy staurosporine 51, an indolo carbazole having powerful antiproliferative activity. Hamacanthin A 1 and B 2, pyrazinone alkaloids have significant antimicrobial activity. Coscinamides 60-62 and Chondriamides 63-65 an indolic enamides which have anti-HIV and cytotoxic activity respectively. Gelluisine A 66 and B 67, trisindole alkaloids have strong anti-serotonin activity and strong affinity with somatostatin and neuropeptide Y receptors in receptor-binding assays. This report reviews the literature on these alkaloids of marine origin and highlights the isolation, structure, latest synthesis and specific biological activities including cytotoxicity, antiviral, antiparasitic, serotonin antagonism and other pharmacological activities of sixty-nine bis and trisindole alkaloids. PMID:17627517

  6. Acute toxicity of biodiesel to freshwater and marine organisms

    SciTech Connect

    Reece, D.; Peterson, C.

    1995-11-01

    Biodiesel fuels are reported to be nontoxic resulting in less potential hazard to fish and other aquatic life in case of accidental spills. This paper reports on static tests with rapeseed methyl ester (RME) and rapeseed ethyl ester (REE) performed according to EPA/600/4-90/027. The acute aquatic toxicity tests were conducted with both rainbow trout and daphnia magna by CH2M Hill in Corvallis, Oregon under contract to the University of Idaho. The LC50 (the point at which 50% have died and 50% are still alive determined by interpolation) values for each of the substrates tested with daphnia magna in parts per million were as follows: control(table salt (NaCl)) = 3.7, D2 = 1.43, RME = 23, REE = 99, and Methyl Soyate = 332. Duplicate tests with rainbow trout were run with 10 organisms per replicate. LC50 numbers were not reported because of the failure to kill a sufficient number of fish at the concentrations tested, even with the diesel control fuel. The 20 percent and 50 percent blends had scattered losses of fish but none of the tests had less than 85 percent survival at any concentrations after 96 hours.

  7. DNA sequence organization in the genomes of five marine invertebrates.

    PubMed

    Goldberg, R B; Crain, W R; Ruderman, J V; Moore, G P; Barnett, T R; Higgins, R C; Gelfand, R A; Galau, G A; Britten, R J; Davidson, E H

    1975-07-21

    The arrangement of repetitive and non-repetitive sequence was studied in the genomic DNA of the oyster (Crassostrea virginica), the surf clam (Spisula solidissima), the horseshoe crab (Limulus polyphemus), a nemertean worm (Cerebratulus lacteus) and a jelly-fish (Aurelia aurita). Except for the jellyfish these animals belong to the protostomial branch of animal evolution, for which little information regarding DNA sequence organization has previously been available. The reassociation kinetics of short (250-300 nucleotide) and long (2,000-3,000 nucleotide) DNA fragments was studied by the hydroxyapatite method. It was shown that in each case a major fraction of the DNA consists of single copy sequences less than about 3,000 nucleotides in length, interspersed with short repetitive sequences. The lengths of the repetitive sequences were estimated by optical hyperchromicity and S1 nuclease measurements made on renaturation products. All the genomes studied include a prominent fraction of interspersed repetitive sequences about 300 nucleotides in length, as well as longer repetitive sequence regions. PMID:238802

  8. Identification of an organic coating on marine aerosol particles by TOF-SIMS

    NASA Astrophysics Data System (ADS)

    Tervahattu, Heikki; Juhanoja, Jyrki; Kupiainen, Kaarle

    2002-08-01

    Marine aerosol particles play an important role in atmospheric processes. It has been suggested that as marine aerosol particles form, they acquire a coating of organic surfactants. This theory has been supported only by indirect evidence. Recently, we gave new morphological indication of such organic coating without however providing molecular speciation. Here we have studied the surface of marine aerosol particles by time-of-flight secondary ion mass spectrometry (TOF-SIMS), which is very suitable for surface research due to its unique combination of surface sensitivity and the detailed molecular information obtained. Spectra from the outermost surface gave high intensity for palmitic acid and lower peaks for other fatty acids. According to TOF-SIMS images, palmitic acid was distributed on small particles, similar with the marine particles. Sputtering stripped palmitic acid and revealed the inner core of the sea-salt particles. Our results show that fatty acids are important ingredients of the outermost surface layer of the studied aerosol particles.

  9. Antifouling effect of bioactive compounds from selected marine organisms in the Obhur Creek, Red Sea

    NASA Astrophysics Data System (ADS)

    Al-Sofyani, Abdulmohsin; Marimuthu, N.; Wilson, J. Jerald; Pugazhendi, Arulazhagan; Dhavamani, Jeyakumar

    2016-06-01

    Three species of sponges and a tunicate were collected from Obhur creek of Jeddah coast for this bioactivity study. In order to assess the antifouling efficacy of selected marine organisms, methanolic extracts of these organisms were tested against different fouling bacterial forms and II-instar stage of the barnacle, Balanus amphitrite. Antibiosis, bioactivity and followed by multivariate analyses were carried out to check the efficacy of antifouling effect of the selected marine organisms. Principal component analysis revealed the exemplary antifouling efficacy of the sponge extracts of Stylissa sp. observed followed by Hyrtios sp. against bacterial forms in the laboratory study. De-trended correspondence analysis confirmed that the contribution of antifouling efficacy of the selected sponge extracts was observed to be more towards Bacillus sp., Vibrio sp. and Alteromonas sp. Moreover, the efficacy of Hyrtios sp. extract (20.430 μg mL-1) followed by Stylissa sp. (30.945 μg mL-1) showed higher against barnacle instar compared with other extracts in the bioactivity assay. Bray-Curtis cluster analysis under paired linkage categorized all the sponge extracts into one major cluster with 75% similarity, and one outlier tunicate. More than 80% similarity observed between Hyrtios sp. and Stylissa sp. Fourier transform infrared spectroscopy (FTIR) showed that the contribution of major peaks found in the marine organisms were towards sulfones, sulfoxides, cyanates and ketones.

  10. Scrutinizing the Scaffolds of Marine Biosynthetics from Different Source Organisms: Gram-Negative Cultured Bacterial Products Enter Center Stage

    PubMed Central

    Still, Patrick C.; Johnson, Tyler A.; Theodore, Christine M.; Loveridge, Steven T.; Crews, Phillip

    2014-01-01

    Compounds from macro marine organisms are presumed to owe their biosynthetic origins to associated microbial symbionts, although few definitive examples exist. An upsurge in the recent literature from 2012 to 2013 has shown that four compounds previously reported from macro marine organisms are in fact biosynthesized by non-photosynthetic Gram-negative bacteria (NPGNB). Structural parallels between compounds isolated from macro marine organisms and NPGNB producers form the basis of this review. Although less attention has been given to investigating the chemistry of NPGNB sources, there exists a significant list of structural parallels between NPGNB and macro marine organism-derived compounds. Alternatively, of the thousands of compounds isolated from Gram-positive actinomycetes, few structural parallels with macro marine organisms are known. A summary of small molecules isolated from marine NPGNB sources is presented, including compounds isolated from marine myxobacteria. From this assemblage of structural parallels and diverse chemical structures, it is hypothesized that the potential for the discovery of inspirational molecules from NPGNB sources is vast and that the recent spike in the literature of macro marine compounds owing their biosynthetic origin to NPGNB producers represents a turning point in the field. PMID:24571234

  11. Distribution and sources of organic matter in surface marine sediments across the North American Arctic margin

    NASA Astrophysics Data System (ADS)

    Goñi, Miguel A.; O'Connor, Alison E.; Kuzyk, Zou Zou; Yunker, Mark B.; Gobeil, Charles; Macdonald, Robie W.

    2013-09-01

    As part of the International Polar Year research program, we conducted a survey of surface marine sediments from box cores along a section extending from the Bering Sea to Davis Strait via the Canadian Archipelago. We used bulk elemental and isotopic compositions, together with biomarkers and principal components analysis, to elucidate the distribution of marine and terrestrial organic matter in different regions of the North American Arctic margin. Marked regional contrasts were observed in organic carbon loadings, with the highest values (≥1 mg C m-2 sediment) found in sites along Barrow Canyon and the Chukchi and Bering shelves, all of which were characterized by sediments with low oxygen exposure, as inferred from thin layers (<2 cm) of Mn oxihydroxides. We found strong regional differences in inorganic carbon concentrations, with sites from the Canadian Archipelago and Lancaster Sound displaying elevated values (2-7 wt %) and highly depleted 14C compositions consistent with inputs from bedrock carbonates. Organic carbon:nitrogen ratios, stable carbon isotopes, and terrigenous organic biomarkers (lignin phenols and cutin acids) all indicate marked regional differences in the proportions of marine and terrigenous organic matter present in surface sediments. Regions such as Barrow Canyon and the Mackenzie River shelf were characterized by the highest contributions of land-derived organic matter, with compositional characteristics that suggested distinct sources and provenance. In contrast, sediments from the Canadian Archipelago and Davis Strait had the smallest contributions of terrigenous organic matter and the lowest organic carbon loadings indicative of a high degree of post-depositional oxidation.

  12. Marine mammals' influence on ecosystem processes affecting fisheries in the Barents Sea is trivial.

    PubMed

    Corkeron, Peter J

    2009-04-23

    Some interpretations of ecosystem-based fishery management include culling marine mammals as an integral component. The current Norwegian policy on marine mammal management is one example. Scientific support for this policy includes the Scenario Barents Sea (SBS) models. These modelled interactions between cod, Gadus morhua, herring, Clupea harengus, capelin, Mallotus villosus and northern minke whales, Balaenoptera acutorostrata. Adding harp seals Phoca groenlandica into this top-down modelling approach resulted in unrealistic model outputs. Another set of models of the Barents Sea fish-fisheries system focused on interactions within and between the three fish populations, fisheries and climate. These model key processes of the system successfully. Continuing calls to support the SBS models despite their failure suggest a belief that marine mammal predation must be a problem for fisheries. The best available scientific evidence provides no justification for marine mammal culls as a primary component of an ecosystem-based approach to managing the fisheries of the Barents Sea. PMID:19126534

  13. Intermittent hypoxia leads to functional reorganization of mitochondria and affects cellular bioenergetics in marine molluscs.

    PubMed

    Ivanina, Anna V; Nesmelova, Irina; Leamy, Larry; Sokolov, Eugene P; Sokolova, Inna M

    2016-06-01

    Fluctuations in oxygen (O2) concentrations represent a major challenge to aerobic organisms and can be extremely damaging to their mitochondria. Marine intertidal molluscs are well-adapted to frequent O2 fluctuations, yet it remains unknown how their mitochondrial functions are regulated to sustain energy metabolism and prevent cellular damage during hypoxia and reoxygenation (H/R). We used metabolic control analysis to investigate the mechanisms of mitochondrial responses to H/R stress (18 h at <0.1% O2 followed by 1 h of reoxygenation) using hypoxia-tolerant intertidal clams Mercenaria mercenaria and hypoxia-sensitive subtidal scallops Argopecten irradians as models. We also assessed H/R-induced changes in cellular energy balance, oxidative damage and unfolded protein response to determine the potential links between mitochondrial dysfunction and cellular injury. Mitochondrial responses to H/R in scallops strongly resembled those in other hypoxia-sensitive organisms. Exposure to hypoxia followed by reoxygenation led to a strong decrease in the substrate oxidation (SOX) and phosphorylation (PHOS) capacities as well as partial depolarization of mitochondria of scallops. Elevated mRNA expression of a reactive oxygen species-sensitive enzyme aconitase and Lon protease (responsible for degradation of oxidized mitochondrial proteins) during H/R stress was consistent with elevated levels of oxidative stress in mitochondria of scallops. In hypoxia-tolerant clams, mitochondrial SOX capacity was enhanced during hypoxia and continued rising during the first hour of reoxygenation. In both species, the mitochondrial PHOS capacity was suppressed during hypoxia, likely to prevent ATP wastage by the reverse action of FO,F1-ATPase. The PHOS capacity recovered after 1 h of reoxygenation in clams but not in scallops. Compared with scallops, clams showed a greater suppression of energy-consuming processes (such as protein turnover and ion transport) during hypoxia, indicated

  14. Flow enhances photosynthesis in marine benthic autotrophs by increasing the efflux of oxygen from the organism to the water

    PubMed Central

    Mass, Tali; Genin, Amatzia; Shavit, Uri; Grinstein, Mor; Tchernov, Dan

    2010-01-01

    Worldwide, many marine coastal habitats are facing rapid deterioration due in part to human-driven changes in habitat characteristics, including changes in flow patterns, a factor known to greatly affect primary production in corals, algae, and seagrasses. The effect of flow traditionally is attributed to enhanced influx of nutrients and dissolved inorganic carbon (DIC) across the benthic boundary layer from the water to the organism however, here we report that the organism’s photosynthetic response to changes in the flow is nearly instantaneous, and that neither nutrients nor DIC limits this rapid response. Using microelectrodes, dual-pulse amplitude-modulated fluorometry, particle image velocimetry, and real time mass-spectrometry with the common scleractinian coral Favia veroni, the alga Gracilaria cornea, and the seagrass Halophila stipulacea, we show that this augmented photosynthesis is due to flow-driven enhancement of oxygen efflux from the organism to the water, which increases the affinity of the RuBisCO to CO2. No augmentation of photosynthesis was found in the absence of flow or when flow occurred, but the ambient concentration of oxygen was artificially elevated. We suggest that water motion should be considered a fundamental factor, equivalent to light and nutrients, in determining photosynthesis rates in marine benthic autotrophs. PMID:20133799

  15. Effects of organism preparation in metallothionein and metal analysis in marine invertebrates for biomonitoring marine pollution.

    PubMed

    Oaten, J F P; Hudson, M D; Jensen, A C; Williams, I D

    2015-06-15

    Metallothionein (MT) is established as a potentially useful biomarker for monitoring aquatic pollution. This paper addresses widespread inconsistencies in storage conditions, tissue type selection and pre-treatment of samples before MT and metal analysis in biomarker studies. This variation hampers comparability and so the widespread implementation of this monitoring approach. Actively sampled Mytilus edulis in Southampton Water, UK were exposed to different storage temperatures, a variety of tissue types were analysed, and various pre-treatments of transportation on ice, transportation in seawater, depuration, and rapid dissection in the field were examined. Storage temperatures of -20 °C were found to be adequate for periods of at least ten weeks, as MT was not reduced by protein degradation compared with samples kept at -80 °C. Whole tissue and digestive gland concentrations of MT and metals were significantly positively correlated and directly relatable. MT in the digestive gland appeared to be more responsive to metals than in whole tissue, where it may be diluted, masking MT responses. However, longer study periods may suffer the effects of mass changes to the digestive gland, which alters MT concentration, and it may therefore be advisable to measure whole tissue. Depuration and transportation in seawater reduced both MT and metal concentrations in the digestive gland, and few correlations between MT and metals were identified for these treatments. It is therefore recommended that: i) samples are transported to the laboratory on ice and dissected as soon as possible thereafter, ii) depuration should not be used when examining MT response to metal exposure until further research clarifying its utility is reported, iii) either whole tissue or the digestive gland can be used to measure MT, though whole tissue may be preferable on long-term studies, and iv) organisms can be stored at -20 °C before analysis for up to ten weeks. These practices can be applied

  16. Thermal alteration experiments on organic matter from recent marine sediments in relation to petroleum genesis

    NASA Technical Reports Server (NTRS)

    Ishiwatari, R.; Ishiwatari, M.; Rohrback, B. G.; Kaplan, I. R.

    1977-01-01

    Three fractions of organic matter: lipid (benzene:methanol-extractable), humic acid (alkali-extractable) and kerogen (residue) were extracted from a young marine sediment (Tanner Basin, offshore southern California) and heated for different times (5-116 hr) and temperatures (150-410 C). The volatile (gases) and liquid products, as well as residual material, were then analyzed. On a weight basis, the lipid fraction produced 58% of the total identified n-alkanes, the kerogen fraction 41%, and the humic acid less than 1%. The volatiles produced by heating the lipid and humic acid fractions were largely CO2 and water, whereas those produced from heated kerogen also included methane, hydrogen gas and small amounts of C2-C4 hydrocarbons. A mechanism for hydrocarbon production due to the thermal alteration of organic constituents of marine sediment is discussed.

  17. Assessment of chronic toxicity of petroleum and produced water components to marine organisms. Final technical summary

    SciTech Connect

    Cherr, G.N.; Higashi, R.M.; Shenker, J.M.

    1993-05-31

    The objectives of the report were: (1) to determine the effects of produced water exposure in early life stages of marine plants and animals, at the cellular, subcellular, and physiological levels; (2) to determine the effects of produced water exposure on reproduction in marine organisms; and (3) to develop non-invasive approaches for assessing reproductive impairment. The effects of produced water (PW) was assessed on development in three ecologically and economically important species, the purple sea urchin (Strongylocentrotus purpuratus), the giant kelp (macrocystis pyrifera), and tsahe California mussel (Mytilus califonrnianus). To determine the basis for effects of PW on these developing organisms, some fundamental studies were prerequisite. Furthermore, eggs and embryos from adults which were outplanted near the discharge were also studied. Finally, the biochemical response of embryos to PW was also defined.

  18. Marine organism repellent covering for protection of underwater objects and method of applying same

    SciTech Connect

    Fischer, K.J.

    1993-07-13

    A method is described of protecting the surface of underwater objects from fouling by growth of marine organisms thereon comprising the steps of: (A) applying a layer of waterproof adhesive to the surface to be protected; (B) applying to the waterproof adhesive layer, a deposit of cayenne pepper material; (C) applying a permeable layer of copper containing material to the adhesive layer in such a configuration as to leave certain areas of the outer surface of the adhesive layer exposed, through open portions of the permeable layer, to the ambient environment of the surface to be protected when such surface is submerged in water; (D) the permeable layer having the property of being a repellent to marine organisms.

  19. Hygroscopic properties of smoke-generated organic aerosol particles emitted in the marine atmosphere

    NASA Astrophysics Data System (ADS)

    Wonaschütz, A.; Coggon, M.; Sorooshian, A.; Modini, R.; Frossard, A. A.; Ahlm, L.; Mülmenstädt, J.; Roberts, G. C.; Russell, L. M.; Dey, S.; Brechtel, F. J.; Seinfeld, J. H.

    2013-10-01

    During the Eastern Pacific Emitted Aerosol Cloud Experiment (E-PEACE), a plume of organic aerosol was produced by a smoke generator and emitted into the marine atmosphere from aboard the R/V Point Sur. In this study, the hygroscopic properties and the chemical composition of the plume were studied at plume ages between 0 and 4 h in different meteorological conditions. In sunny conditions, the plume particles had very low hygroscopic growth factors (GFs): between 1.05 and 1.09 for 30 nm and between 1.02 and 1.1 for 150 nm dry size at a relative humidity (RH) of 92%, contrasted by an average marine background GF of 1.6. New particles were produced in large quantities (several 10 000 cm-3), which lead to substantially increased cloud condensation nuclei (CCN) concentrations at supersaturations between 0.07 and 0.88%. Ratios of oxygen to carbon (O : C) and water-soluble organic mass (WSOM) increased with plume age: from < 0.001 to 0.2, and from 2.42 to 4.96 μg m-3, respectively, while organic mass fractions decreased slightly (~ 0.97 to ~ 0.94). High-resolution aerosol mass spectrometer (AMS) spectra show that the organic fragment m/z 43 was dominated by C2H3O+ in the small, new particle mode and by C3H7+ in the large particle mode. In the marine background aerosol, GFs for 150 nm particles at 40% RH were found to be enhanced at higher organic mass fractions: an average GF of 1.06 was observed for aerosols with an organic mass fraction of 0.53, and a GF of 1.04 for an organic mass fraction of 0.35.

  20. Organic Matter Loading Affects Lodgepole Pine Seedling Growth

    NASA Astrophysics Data System (ADS)

    Wei, Xiaohua; Li, Qinglin; Waterhouse, M. J.; Armleder, H. M.

    2012-06-01

    Organic matter plays important roles in returning nutrients to the soil, maintaining forest productivity and creating habitats in forest ecosystems. Forest biomass is in increasing demand for energy production, and organic matter has been considered as a potential supply. Thus, an important management question is how much organic matter should be retained after forest harvesting to maintain forest productivity. To address this question, an experimental trial was established in 1996 to evaluate the responses of lodgepole pine seedling growth to organic matter loading treatments. Four organic matter loading treatments were randomly assigned to each of four homogeneous pine sites: removal of all organic matter on the forest floor, organic matter loading quantity similar to whole-tree-harvesting residuals left on site, organic matter loading quantity similar to stem-only-harvesting residuals, and organic matter loading quantity more similar to what would be found in disease- or insect-killed stands. Our 10-year data showed that height and diameter had 29 and 35 % increase, respectively, comparing the treatment with the most organic matter loading to the treatment with the least organic matter loading. The positive response of seedling growth to organic matter loading may be associated with nutrients and/or microclimate change caused by organic matter, and requires further study. The dynamic response of seedling growth to organic matter loading treatments highlights the importance of long-term studies. Implications of those results on organic matter management are discussed in the context of forest productivity sustainability.

  1. Global Distribution and Climate Forcing of Marine Organic Aerosol - Part 2: Effects on Cloud Properties and Radiative Forcing

    SciTech Connect

    Gantt, Brett; Xu, Jun; Meskhidze, N.; Zhang, Yang; Nenes, Athanasios; Ghan, Steven J.; Liu, Xiaohong; Easter, Richard C.; Zaveri, Rahul A.

    2012-07-25

    A series of simulations with the Community Atmosphere Model version 5 (CAM5) with a 7-mode Modal Aerosol Model were conducted to assess the changes in cloud microphysical properties and radiative forcing resulting from marine organic aerosols. Model simulations show that the anthropogenic aerosol indirect forcing (AIF) predicted by CAM5 is decreased in absolute magnitude by up to 0.09 Wm{sup -2} (7 %) when marine organic aerosols are included. Changes in the AIF from marine organic aerosols are associated with small global increases in low-level incloud droplet number concentration and liquid water path of 1.3 cm{sup -3} (1.5 %) and 0.22 gm{sup -2} (0.5 %), respectively. Areas especially sensitive to changes in cloud properties due to marine organic aerosol include the Southern Ocean, North Pacific Ocean, and North Atlantic Ocean, all of which are characterized by high marine organic emission rates. As climate models are particularly sensitive to the background aerosol concentration, this small but non-negligible change in the AIF due to marine organic aerosols provides a notable link for ocean-ecosystem marine low-level cloud interactions and may be a candidate for consideration in future earth system models.

  2. Preferential remineralization of dissolved organic phosphorus and non-Redfield DOM dynamics in the global ocean: Impacts on marine productivity, nitrogen fixation, and carbon export

    NASA Astrophysics Data System (ADS)

    Letscher, Robert T.; Moore, J. Keith

    2015-03-01

    Selective removal of nitrogen (N) and phosphorus (P) from the marine dissolved organic matter (DOM) pool has been reported in several regional studies. Because DOM is an important advective/mixing pathway of carbon (C) export from the ocean surface layer and its non-Redfieldian stoichiometry would affect estimates of marine export production per unit N and P, we investigated the stoichiometry of marine DOM and its remineralization globally using a compiled DOM data set. Marine DOM is enriched in C and N compared to Redfield stoichiometry, averaging 317:39:1 and 810:48:1 for C:N:P within the degradable and total bulk pools, respectively. Dissolved organic phosphorus (DOP) is found to be preferentially remineralized about twice as rapidly with respect to the enriched C:N stoichiometry of marine DOM. Biogeochemical simulations with the Biogeochemical Elemental Cycling model using Redfield and variable DOM stoichiometry corroborate the need for non-Redfield dynamics to match the observed DOM stoichiometry. From our model simulations, preferential DOP remineralization is found to increase the strength of the biological pump by ~9% versus the case of Redfield DOM cycling. Global net primary productivity increases ~10% including an increase in marine nitrogen fixation of ~26% when preferential DOP remineralization and direct utilization of DOP by phytoplankton are included. The largest increases in marine nitrogen fixation, net primary productivity, and carbon export are observed within the western subtropical gyres, suggesting the lateral transfer of P in the form of DOP from the productive eastern and poleward gyre margins may be important for sustaining these processes downstream in the subtropical gyres.

  3. Dinoflagellate species and organic facies evidence of marine transgression and regression in the atlantic coastal plain

    USGS Publications Warehouse

    Habib, D.; Miller, J.A.

    1989-01-01

    Palynological evidence is used to date and interpret depositional environments of sediments of Campanian, Maestrichtian and early Danian ages cored in three wells from South Carolina and Georgia. The evidence is usefil for distinguishing environments which lithofacies evidence indicates a range from nonmarine to coastal to inner neritic shallow shelf. Numerous dinoflagellate species and an organic facies defined abundant amoprphous debris (amorphous debris facies) distinguish shallow shelf sediments deposited during marine transgression. The nearshore amorphous debris facies of late Campanian age consists of heterogenous assemblages dominated by Palaeohystrichophora infusorioides Deflandre or Hystrichosphaerina varians (May). The farther offshore amorphous debris facies of late early Maestrichtian to late Maestrichtian age consists of heterogenous assemblages dominated by Glaphyrocysta retiintexta (Cookson) and/or Areoligera medusettiformis (Wetzel). The larger number of dinoflagellate species in the offshore facies represents the maximum transgression detected in the investigated interval. A multiple occurrence datum defined by the combination of first appearance, klast appearances and sole occurrence of dinoflagellate species at the base of each interval distinguished by the amorphous debris facies provides the first evidence of marine transgression. Relatively small organic residues consisting of intertinite and few or no palynomorphs define the inertinite facies in nonmarine deltaic and in coastal (lagoonal, tidal flat, interdistributary bary) sediments. Dinocyt{star, open}s are absent in the nonmarine sediments and are represented by few species and few specimens in the coastal inertinite faceis. A third organic facies (vascular tissue facies) is defined by the abundance of land plant tissue. Sporomorph species, including those of the Normapolles pollen group and of pteridophyte spores, comprise a large proportion of the total palynomorph flora in the

  4. Elevated cadmium accumulation in marine organisms from Terra Nova Bay (Antarctica)

    SciTech Connect

    Bargagli, R.; Nelli, L.; Ancora, S.; Focardi, S.

    1996-08-01

    As a contribution towards identification of the principal environmental factors involved in cadmium accumulation in Antarctic marine organisms and the establishment of a baseline near the Italian Antarctic Station {open_quotes}Baia Terra Nova{close_quotes}, surface sediments, plankton and benthic organisms were studied in coastal waters of Terra Nova Bay (Ross Sea). The cadmium content of sediments was similar to that regarded as background in most marine coastal areas, whereas in surface water, phyto- and zooplankton it was similar to values measured in areas of enhanced upwelling. Algal and animal taxa dominating benthic associations had a higher cadmium content than related species from other seas. Very high concentrations of the metal were found in sponges (10-80 {mu}g/g dw) and in the digestive gland of molluscs (up to 345 {mu}g/g in Neobuccinum eatoni). The rapid regeneration of cadmium and its natural occurrence and bioavailability in highly productive coastal waters seem to be responsible for cadmium accumulation in the tissues of marine organisms near the {open_quotes}Baia Terra Nova{close_quotes} station. 45 refs., 3 figs., 4 tabs.

  5. Hydrographic controls on marine organic matter fate and microbial diversity in the western Irish Sea

    NASA Astrophysics Data System (ADS)

    O'Reilly, Shane; Szpak, Michal; Monteys, Xavier; Flanagan, Paul; Allen, Christopher; Kelleher, Brian

    2014-05-01

    Cycling of organic matter (OM) is the key biological process in the marine environment1 and knowledge of the sources and the reactivity of OM, in addition to factors controlling its distribution in estuarine, coastal and shelf sediments are of key importance for understanding global biogeochemical cycles2. With recent advances in cultivation-independent molecular approaches to microbial ecology, the key role of prokaryotes in global biogeochemical cycling in marine ecosystems has been emphasised3,4. However, spatial studies combining the distribution and fate of OM with microbial community abundance and diversity remain rare. Here, a combined spatial lipid biomarker and 16S rRNA tagged pyrosequencing study was conducted in surface sediments and particulate matter across hydrographically distinct zones associated with the seasonal western Irish Sea gyre. The aim was to assess the spatial variation of, and factors controlling, marine organic cycling and sedimentary microbial communities across these distinct zones. The distribution of phospholipid fatty acids, source-specific sterols, wax esters and C25 highly branched isoprenoids indicate that diatoms, dinoflagellates and green algae were the major contributors of marine organic matter, while the distribution of cholesterol, wax esters and C20 and C22 polyunsaturated fatty acids have highlighted the importance of copepod grazing for mineralizing organic matter in the water column5. This marine OM production and mineralisation was greatest in well-mixed waters compared to offshore stratified waters. Lipid analysis and 16S rRNA PCR-DGGE profiling also suggests that sedimentary bacterial abundance increases while community diversity decreases in offshore stratified waters. The major bacterial classes are the Deltaproteobacteria, Clostridia, Flavobacteriia, Gammaproteobactera and Bacteroiidia. At the family/genus level most groups appear to be associated with organoheterotrophic processing of sedimentary OM, ranging

  6. Redox effects on the microbial degradation of refractory organic matter in marine sediments

    NASA Astrophysics Data System (ADS)

    Reimers, Clare E.; Alleau, Yvan; Bauer, James E.; Delaney, Jennifer; Girguis, Peter R.; Schrader, Paul S.; Stecher, Hilmar A.

    2013-11-01

    Microbially mediated reduction-oxidation (redox) reactions are often invoked as being the mechanisms by which redox state influences the degradation of sedimentary organic matter (OM) in the marine environment. To evaluate the effects of elevated, oscillating and reduced redox potentials on the fate of primarily aged, mineral-adsorbed OM contained in continental shelf sediments, we used microbial fuel cells to control redox state within and around marine sediments, without amending the sediments with reducing or oxidizing substances. We subsequently followed electron fluxes in the redox elevated and redox oscillating treatments, and related sediment chemical, isotopic and bacterial community changes to redox conditions over a 748-day experimental period. The electron fluxes of the elevated and oscillating redox cells were consistent with models of organic carbon (OC) oxidation with time-dependent first-order rate constants declining from 0.023 to 0.005 y-1, in agreement with rate constants derived from typical OC profiles and down core ages of offshore sediments, or from sulfate reduction rate measurements in similar sediments. Moreover, although cumulative electron fluxes were higher in the continuously elevated redox treatment, incremental rates of electron harvesting in the two treatments converged over the 2 year experiment. These similar rates were reflected in chemical indicators of OM metabolism such as dissolved OC and ammonia, and particulate OC concentrations, which were not significantly different among all treatments and controls over the experimental time-scale. In contrast, products of carbonate and opal dissolution and metal mobilization showed greater enrichments in sediments with elevated and oscillating redox states. Microbial community composition in anode biofilms and surrounding sediments was assessed via high-throughput 16S rRNA gene sequencing, and these analyses revealed that the elevated and oscillatory redox treatments led to the

  7. Tracking small mountainous river derived terrestrial organic carbon across the active margin marine environment

    NASA Astrophysics Data System (ADS)

    Childress, L. B.; Blair, N. E.; Orpin, A. R.

    2015-12-01

    Active margins are particularly efficient in the burial of organic carbon due to the close proximity of highland sources to marine sediment sinks and high sediment transport rates. Compared with passive margins, active margins are dominated by small mountainous river systems, and play a unique role in marine and global carbon cycles. Small mountainous rivers drain only approximately 20% of land, but deliver approximately 40% of the fluvial sediment to the global ocean. Unlike large passive margin systems where riverine organic carbon is efficiently incinerated on continental shelves, small mountainous river dominated systems are highly effective in the burial and preservation of organic carbon due to the rapid and episodic delivery of organic carbon sourced from vegetation, soil, and rock. To investigate the erosion, transport, and burial of organic carbon in active margin small mountainous river systems we use the Waipaoa River, New Zealand. The Waipaoa River, and adjacent marine depositional environment, is a system of interest due to a large sediment yield (6800 tons km-2 yr-1) and extensive characterization. Previous studies have considered the biogeochemistry of the watershed and tracked the transport of terrestrially derived sediment and organics to the continental shelf and slope by biogeochemical proxies including stable carbon isotopes, lignin phenols, n-alkanes, and n-fatty acids. In this work we expand the spatial extent of investigation to include deep sea sediments of the Hikurangi Trough. Located in approximately 3000 m water depth 120 km from the mouth of the Waipaoa River, the Hikurangi Trough is the southern extension of the Tonga-Kermadec-Hikurangi subduction system. Piston core sediments collected by the National Institute of Water and Atmospheric Research (NIWA, NZ) in the Hikurangi Trough indicate the presence of terrestrially derived material (lignin phenols), and suggest a continuum of deposition, resuspension, and transport across the margin

  8. Behavioral and Chemical Ecology of Marine Organisms with Respect to Tetrodotoxin

    PubMed Central

    Williams, Becky L.

    2010-01-01

    The behavioral and chemical ecology of marine organisms that possess tetrodotoxin (TTX) has not been comprehensively reviewed in one work to date. The evidence for TTX as an antipredator defense, as venom, as a sex pheromone, and as an attractant for TTX-sequestering organisms is discussed. Little is known about the adaptive value of TTX in microbial producers; thus, I focus on what is known about metazoans that are purported to accumulate TTX through diet or symbioses. Much of what has been proposed is inferred based on the anatomical distribution of TTX. Direct empirical tests of these hypotheses are absent in most cases. PMID:20411104

  9. Soil organic matter composition affected by potato cropping managements

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Organic matter is a small but important soil component. As a heterogeneous mixture of geomolecules and biomolecules, soil organic matter (SOM) can be fractionated into distinct pools with different solubility and lability. Water extractable organic matter (WEOM) fraction is the most labile and mobil...

  10. Production and excitation-emission fluorescence properties of colored dissolved organic matter from marine tropical species

    NASA Astrophysics Data System (ADS)

    Mendoza, W. G.; Zika, R. G.

    2009-12-01

    Colored dissolved organic matter (CDOM) plays an important key role in the photochemistry and biogeochemical cycling of carbon in the coastal region. Their distribution can vary in space and time due to supply of CDOM from different sources. To determine properties of fluorescence-CDOM produced by various marine tropical species, two species from each of the different marine communities were examined after incubation in the dark for forty-nine (49) days: seagrasses-Enhalus acoroides (EA), Thalassia testudinium (TT); corals-Pocillopora cylindrical (PC), Seriatopora hystrix (SH) ; mangroves- Avicennia marina (AM), Sonneratia alba (SA); brown algae-Hormophysa cuneiformis (HC), Sargassum sp.(SS). Average CDOM production is highest from mangrove species (218 QSU/g-sample/day), followed by seagrass (42 QSU/g-sample/day), brown alga (26 QSU/g-sample/day) then corals (19 QSU/g-sample/day).The fluorescence maximum at 312; 380-420 nm emission-excitation pair appears to be present in all species that is an identified humic-like signature. These results suggest that the production of the fluorescent CDOM fraction is a common phenomenon of tropical marine species and as such constitutes a major part of the marine CDOM pool in coastal regions.

  11. Size-resolved parameterization of primary organic carbon in fresh marine aerosols

    SciTech Connect

    Long, Michael S; Keene, William C; Erickson III, David J

    2009-12-01

    Marine aerosols produced by the bursting of artificially generated bubbles in natural seawater are highly enriched (2 to 3 orders of magnitude based on bulk composition) in marine-derived organic carbon (OC). Production of size-resolved particulate OC was parameterized based on a Langmuir kinetics-type association of OC to bubble plumes in seawater and resulting aerosol as constrained by measurements of aerosol produced from highly productive and oligotrophic seawater. This novel approach is the first to account for the influence of adsorption on the size-resolved association between marine aerosols and OC. Production fluxes were simulated globally with an eight aerosol-size-bin version of the NCAR Community Atmosphere Model (CAM v3.5.07). Simulated number and inorganic sea-salt mass production fell within the range of published estimates based on observationally constrained parameterizations. Because the parameterization does not consider contributions from spume drops, the simulated global mass flux (1.5 x 10{sup 3} Tg y{sup -1}) is near the lower limit of published estimates. The simulated production of aerosol number (2.1 x 10{sup 6} cm{sup -2} s{sup -1}) and OC (49 Tg C y{sup -1}) fall near the upper limits of published estimates and suggest that primary marine aerosols may have greater influences on the physiochemical evolution of the troposphere, radiative transfer and climate, and associated feedbacks on the surface ocean than suggested by previous model studies.

  12. Significance of investigating allelopathic interactions of marine organisms in the discovery and development of cytotoxic compounds.

    PubMed

    Singh, Anshika; Thakur, Narsinh L

    2016-01-01

    Marine sessile organisms often inhabit rocky substrata, which are crowded by other sessile organisms. They acquire living space via growth interactions and/or by allelopathy. They are known to secrete toxic compounds having multiple roles. These compounds have been explored for their possible applications in cancer chemotherapy, because of their ability to kill rapidly dividing cells of competitor organisms. As compared to the therapeutic applications of these compounds, their possible ecological role in competition for space has received little attention. To select the potential candidate organisms for the isolation of lead cytotoxic molecules, it is important to understand their chemical ecology with special emphasis on their allelopathic interactions with their competitors. Knowledge of the ecological role of allelopathic compounds will contribute significantly to an understanding of their natural variability and help us to plan effective and sustainable wild harvests to obtain novel cytotoxic chemicals. This review highlights the significance of studying allelopathic interactions of marine invertebrates in the discovery of cytotoxic compounds, by selecting sponge as a model organism. PMID:26362501

  13. METAL-COLLOID PARTITIONING IN ARTIFICIAL INTERSTITIAL WATERS OF MARINE SEDIMENTS: INFLUENCES OF SALINITY, PH AND COLLOIDAL ORGANIC CARBON CONCENTRATION

    EPA Science Inventory

    For decades, heavy metals have been deposited into marine sediments as a result of anthropogenic activities. Depending on their bioavailability, these metals may represent a risk to benthic organisms. Dissolved interstitial water metal concentrations have been shown to be better ...

  14. Effects of organic matter addition on methylmercury formation in capped and uncapped marine sediments.

    PubMed

    Ndungu, Kuria; Schaanning, Morten; Braaten, Hans Fredrik Veiteberg

    2016-10-15

    In situ subaqueous capping (ISC) of contaminated marine sediments is frequently proposed as a feasible and effective mitigation option. However, though effective in isolating mercury species migration into overlying water, capping can also alter the location and extent of biogeochemical zones and potentially enhance methylmercury (MeHg) formation in Hg-contaminated marine sediments. We carried out a boxcosm study to investigate whether the addition of organic carbon (OC) to Hg-contaminated marine sediments beneath an in situ cap would initiate and/or enhance MeHg formation of the inorganic Hg present. The study was motivated by ongoing efforts to remediate ca. 30,000 m(2) of Hg-contaminated seabed sediments from a Hg spill from the U864 WWII submarine wreck. By the time of sinking, the submarine is assumed to have been holding a cargo of ca. 65 tons of liquid Hg. Natural organic matter and petroleum hydrocarbons from fuels and lubricants in the wreck are potential sources of organic carbon that could potentially fuel MeHg formation beneath a future cap. The results of our study clearly demonstrated that introduction of algae OC to Hg-contaminated sediments, triggered high rates of MeHg production as long a there was sufficient OC. Thus, MeHg production was limited by the amount of organic carbon available. The study results also confirmed that, within the six-month duration of the study and in the absence of bioturbating fauna, a 3-cm sediment clay cap could effectively reduce fluxes of Hg species to the overlying water and isolate the Hg-contaminated sediments from direct surficial deposition of organic matter that could potentially fuel methylation. PMID:27494695

  15. Biochemical features and kinetic properties of α-amylases from marine organisms.

    PubMed

    Homaei, Ahmad; Ghanbarzadeh, Mehri; Monsef, Ferial

    2016-02-01

    Marine organisms have the ability of producing enzymes with unique properties compared to those of the same enzymes from terrestrial organisms. α-Amylases are among the most important extracellular enzymes found in various groups of organisms such as plants, animals and microorganisms. They play important roles in their carbohydrates metabolism of each organism. Microbial production of α-amylases is more effective than other sources of the enzyme. Many microorganisms are known to produce α-amylase including bacteria, yeasts, fungi and actinomycetes. However, enzymes from fungal and bacterial sources have dominated applications in industrial sectors. This review deals with what is known about the kinetics, biochemical properties and applications of these enzymes that have only been found in them and not in other α-amylases, and discussing their mechanistic and regulatory implications. PMID:26657843

  16. How critical care nurses' roles and education affect organ donation.

    PubMed

    Jawoniyi, Oluwafunmilayo Ololade; Gormley, Kevin

    Organ and tissue dysfunction and failure cause high mortality rates around the world. Tissue and organs transplantation is an established, cost-effective, life-saving treatment for patients with organ failure. However, there is a large gap between the need for and the supply of donor organs. Acute and critical care nurses have a central role in the organ donation process, from identifying and assessing potential donors and supporting their families to involvement in logistics. Nurses with an in-depth knowledge of donation understand its clinical and technical aspects as well as the moral and legal considerations. Nurses have a major role to play in tackling organ and tissue shortages. Such a role cannot be adequately performed if nurses are not fully educated about donation and transplant. Such education could be incorporated into mandatory training and completed by all nurses. PMID:26153810

  17. Marine Pharmacology in 2009–2011: Marine Compounds with Antibacterial, Antidiabetic, Antifungal, Anti-Inflammatory, Antiprotozoal, Antituberculosis, and Antiviral Activities; Affecting the Immune and Nervous Systems, and other Miscellaneous Mechanisms of Action †

    PubMed Central

    Mayer, Alejandro M. S.; Rodríguez, Abimael D.; Taglialatela-Scafati, Orazio; Fusetani, Nobuhiro

    2013-01-01

    The peer-reviewed marine pharmacology literature from 2009 to 2011 is presented in this review, following the format used in the 1998–2008 reviews of this series. The pharmacology of structurally-characterized compounds isolated from marine animals, algae, fungi and bacteria is discussed in a comprehensive manner. Antibacterial, antifungal, antiprotozoal, antituberculosis, and antiviral pharmacological activities were reported for 102 marine natural products. Additionally, 60 marine compounds were observed to affect the immune and nervous system as well as possess antidiabetic and anti-inflammatory effects. Finally, 68 marine metabolites were shown to interact with a variety of receptors and molecular targets, and thus will probably contribute to multiple pharmacological classes upon further mechanism of action studies. Marine pharmacology during 2009–2011 remained a global enterprise, with researchers from 35 countries, and the United States, contributing to the preclinical pharmacology of 262 marine compounds which are part of the preclinical pharmaceutical pipeline. Continued pharmacological research with marine natural products will contribute to enhance the marine pharmaceutical clinical pipeline, which in 2013 consisted of 17 marine natural products, analogs or derivatives targeting a limited number of disease categories. PMID:23880931

  18. Species sensitivity distribution evaluation for chronic nickel toxicity to marine organisms.

    PubMed

    DeForest, David K; Schlekat, Christian E

    2013-10-01

    In Europe, the European Union's Existing Substances Regulation (EEC 793/93), the REACH Regulation, and Water Framework Directive all share common guidance for conducting environmental effects assessments, which can be further used to derive predicted no effect concentrations (PNECs) and environmental quality standards (EQS) for chemical substances. To meet the criteria for using a species sensitivity distribution (SSD) in the effects assessment of Ni for marine organisms, chronic toxicity data from the published scientific literature were augmented with toxicity testing of several additional marine species including: a unicellular alga (Dunalliela tertiolecta), a diatom (Skeletonema costatum), 2 macroalgae (Champia parvula, Macrocystis pyrifera), 2 mollusks (Crassostrea gigas, Mytilus galloprovincialis), 2 echinoderms (Dendraster excentricus, Strongylocentrotus purpuratus), a polychaete (Neanthes arenaceodentata), and a fish (Cyprinodon variegatus). Based on this updated database, which includes chronic Ni toxicity data for a total of 17 marine species, HC5 values (hazardous concentrations to 5% of the species) were derived using an SSD. The most sensitive species is a tropical sea urchin from the Caribbean region, Diadema antillarum, which has an EC10 that is approximately 6-fold less than the EC10 for the second most sensitive species tested. There is some uncertainty in the representativeness of D. antillarum to temperate European marine waters because 1) a European sea urchin species (Paracentrotus lividus) is approximately 48-fold less sensitive to Ni, and (2) ambient marine Ni concentrations in at least some European waters closely approach the D. antillarum EC10. The HC5 values with and without D. antillarum included in the SSD are 3.9 and 20.9 μg/L, respectively. Site-specific toxicity testing with local species may be warranted for locations where Ni concentrations fall between the range in HC5s of 3.9 to 20.9 μg/L. PMID:23553986

  19. Novel and potential physiological roles of vacuolar-type H+-ATPase in marine organisms.

    PubMed

    Tresguerres, Martin

    2016-07-15

    The vacuolar-type H(+)-ATPase (VHA) is a multi-subunit enzyme that uses the energy from ATP hydrolysis to transport H(+) across biological membranes. VHA plays a universal role in essential cellular functions, such as the acidification of lysosomes and endosomes. In addition, the VHA-generated H(+)-motive force can drive the transport of diverse molecules across cell membranes and epithelia for specialized physiological functions. Here, I discuss diverse physiological functions of VHA in marine animals, focusing on recent discoveries about base secretion in shark gills, potential bone dissolution by Osedax bone-eating worms and its participation in a carbon-concentrating mechanism that promotes coral photosynthesis. Because VHA is evolutionarily conserved among eukaryotes, it is likely to play many other essential physiological roles in diverse marine organisms. Elucidating and characterizing basic VHA-dependent mechanisms could help to determine species responses to environmental stress, including (but not limited to) that resulting from climate change. PMID:27445397

  20. Marine mixotrophy increases trophic transfer efficiency, mean organism size, and vertical carbon flux.

    PubMed

    Ward, Ben A; Follows, Michael J

    2016-03-15

    Mixotrophic plankton, which combine the uptake of inorganic resources and the ingestion of living prey, are ubiquitous in marine ecosystems, but their integrated biogeochemical impacts remain unclear. We address this issue by removing the strict distinction between phytoplankton and zooplankton from a global model of the marine plankton food web. This simplification allows the emergence of a realistic trophic network with increased fidelity to empirical estimates of plankton community structure and elemental stoichiometry, relative to a system in which autotrophy and heterotrophy are mutually exclusive. Mixotrophy enhances the transfer of biomass to larger sizes classes further up the food chain, leading to an approximately threefold increase in global mean organism size and an ∼35% increase in sinking carbon flux. PMID:26831076

  1. Polar organic micropollutants in the coastal environment of different marine systems.

    PubMed

    Nödler, Karsten; Voutsa, Dimitra; Licha, Tobias

    2014-08-15

    Polar anthropogenic organic micropollutants are frequently detected in freshwater and discharged on large scale into marine systems. In this work the results of 153 samples collected from the shorelines of the Baltic Sea (Germany), Northern Adriatic Sea (Italy), Aegean Sea and Dardanelles (Greece & Turkey), San Francisco Bay (USA), Pacific Ocean (USA), Mediterranean Sea (Israel), and Balearic Sea (Spain) are presented. The samples were analyzed for various classes of micropollutants such as pharmaceuticals, corrosion inhibitors, biocides, and stimulants. Caffeine, paraxanthine, theobromine, tolyltriazole, 1H-benzotriazole, and atrazine were detected in>50% of all samples. The detection frequencies of carbamazepine, iopamidol, diuron, sulfamethoxazole, paracetamol, theophylline, and atenolol were between 20% and 32%. As caffeine is linked to untreated wastewater, the widespread occurrence of raw sewage in marine environments and thus potentially elevated nutrient concentrations and risk for the presence of wastewater-related pathogens is remarkable. PMID:25015017

  2. Effect of silver nanoparticles on marine organisms belonging to different trophic levels.

    PubMed

    Gambardella, Chiara; Costa, Elisa; Piazza, Veronica; Fabbrocini, Adele; Magi, Emanuele; Faimali, Marco; Garaventa, Francesca

    2015-10-01

    Silver nanoparticles (Ag-NPs) are increasingly used in a wide range of consumer products and such an extensive use raises questions about their safety and environmental toxicity. We investigated the potential toxicity of Ag-NPs in the marine ecosystem by analyzing the effects on several organisms belonging to different trophic levels. Algae (Dunaliella tertiolecta, Skeletonema costatum), cnidaria (Aurelia aurita jellyfish), crustaceans (Amphibalanus amphitrite and Artemia salina) and echinoderms (Paracentrotus lividus) were exposed to Ag-NPs and different end-points were evaluated: algal growth, ephyra jellyfish immobilization and frequency of pulsations, crustaceans mortality and swimming behavior, and sea urchin sperm motility. Results showed that all the end-points were able to underline a dose-dependent effect. Jellyfish were the most sensitive species, followed by barnacles, sea urchins, green algae, diatoms and brine shrimps. In conclusion, Ag-NPs exposure can influence different trophic levels within the marine ecosystem. PMID:26065810

  3. Thraustochytrids, a neglected component of organic matter decomposition and food webs in marine sediments.

    PubMed

    Bongiorni, Lucia

    2012-01-01

    Decomposition of organic matter in marine sediments is a critical step influencing oxygen and carbon fluxes. In addition to heterotrophic bacteria and fungi, osmoheterotrophic protists may contribute to this process, but the extent of their role as decomposers is still unknown. Among saprophytic protists, the thraustochytrids have been isolated from different habitats and substrates. Recently, they have been reported to be particularly abundant in marine sediments characterized by the presence of recalcitrant organic matter such as seagrass and mangrove detritus where they can reach biomass comparable to those of other protists and bacteria. In addition, their capacity to produce a wide spectrum of enzymes suggests a substantial role of thraustochytrids in sedimentary organic decomposition. Moreover, thraustochytrids may represent a food source for several benthic microorganisms and animals and may be involved in the upgrading of nutrient-poor organic detritus. This chapter presents an overview on studies of thraustochytrids in benthic ecosystems and discusses future prospectives and possible methods to quantify their role in benthic food webs. PMID:22222824

  4. Comparison of Bioavailability and Biotransformation of Inorganic and Organic Arsenic to Two Marine Fish.

    PubMed

    Zhang, Wei; Wang, Wen-Xiong; Zhang, Li

    2016-03-01

    Dietary uptake could be the primary route of arsenic (As) bioaccumulation in marine fish, but the bioavailability of inorganic and organic As remains elusive. In this study, we investigated the trophic transfer and bioavailability of As in herbivorous rabbitfish Siganus fuscescens and carnivorous seabass Lateolabrax japonicus. Rabbitfish were fed with one artificial diet or three macroalgae, whereas seabass were fed with one artificial diet, one polychaete, or two bivalves for 28 days. The six spiked fresh prey diets contained different proportions of inorganic As [As(III) and As(V)] and organic As compounds [methylarsenate (MMA), dimethylarsenate (DMA), and arsenobetaine (AsB)], and the spiked artificial diet mainly contained As(III) or As(V). We demonstrated that the trophic transfer factors (TTF) of As in both fish were negatively correlated with the concentrations of inorganic As in the diets, while there was no relationship between TTF and the AsB concentrations in the diets. Positive correlation was observed between the accumulated As concentrations and the AsB concentrations in both fish, suggesting that organic As compounds (AsB) were more trophically available than inorganic As. Furthermore, the biotransformation ability of seabass was higher than that in rabbitfish, which resulted in higher As accumulation in seabass than in rabbitfish. Our study demonstrated that different prey with different inorganic/organic As proportions resulted in diverse bioaccumulation of total As in different marine fish. PMID:26835720

  5. The Organic Complexation of Iron in the Marine Environment: A Review

    PubMed Central

    Gledhill, Martha; Buck, Kristen N.

    2012-01-01

    Iron (Fe) is an essential micronutrient for marine organisms, and it is now well established that low Fe availability controls phytoplankton productivity, community structure, and ecosystem functioning in vast regions of the global ocean. The biogeochemical cycle of Fe involves complex interactions between lithogenic inputs (atmospheric, continental, or hydrothermal), dissolution, precipitation, scavenging, biological uptake, remineralization, and sedimentation processes. Each of these aspects of Fe biogeochemical cycling is likely influenced by organic Fe-binding ligands, which complex more than 99% of dissolved Fe. In this review we consider recent advances in our knowledge of Fe complexation in the marine environment and their implications for the biogeochemistry of Fe in the ocean. We also highlight the importance of constraining the dissolved Fe concentration value used in interpreting voltammetric titration data for the determination of Fe speciation. Within the published Fe speciation data, there appear to be important temporal and spatial variations in Fe-binding ligand concentrations and their conditional stability constants in the marine environment. Excess ligand concentrations, particularly in the truly soluble size fraction, seem to be consistently higher in the upper water column, and especially in Fe-limited, but productive, waters. Evidence is accumulating for an association of Fe with both small, well-defined ligands, such as siderophores, as well as with larger, macromolecular complexes like humic substances, exopolymeric substances, and transparent exopolymers. The diverse size spectrum and chemical nature of Fe ligand complexes corresponds to a change in kinetic inertness which will have a consequent impact on biological availability. However, much work is still to be done in coupling voltammetry, mass spectrometry techniques, and process studies to better characterize the nature and cycling of Fe-binding ligands in the marine environment. PMID

  6. A new laboratory radio frequency identification (RFID) system for behavioural tracking of marine organisms.

    PubMed

    Aguzzi, Jacopo; Sbragaglia, Valerio; Sarriá, David; García, José Antonio; Costa, Corrado; del Río, Joaquín; Mànuel, Antoni; Menesatti, Paolo; Sardà, Francesc

    2011-01-01

    Radio frequency identification (RFID) devices are currently used to quantify several traits of animal behaviour with potential applications for the study of marine organisms. To date, behavioural studies with marine organisms are rare because of the technical difficulty of propagating radio waves within the saltwater medium. We present a novel RFID tracking system to study the burrowing behaviour of a valuable fishery resource, the Norway lobster (Nephrops norvegicus L.). The system consists of a network of six controllers, each handling a group of seven antennas. That network was placed below a microcosm tank that recreated important features typical of Nephrops' grounds, such as the presence of multiple burrows. The animals carried a passive transponder attached to their telson, operating at 13.56 MHz. The tracking system was implemented to concurrently report the behaviour of up to three individuals, in terms of their travelled distances in a specified unit of time and their preferential positioning within the antenna network. To do so, the controllers worked in parallel to send the antenna data to a computer via a USB connection. The tracking accuracy of the system was evaluated by concurrently recording the animals' behaviour with automated video imaging. During the two experiments, each lasting approximately one week, two different groups of three animals each showed a variable burrow occupancy and a nocturnal displacement under a standard photoperiod regime (12 h light:12 h dark), measured using the RFID method. Similar results were obtained with the video imaging. Our implemented RFID system was therefore capable of efficiently tracking the tested organisms and has a good potential for use on a wide variety of other marine organisms of commercial, aquaculture, and ecological interest. PMID:22163710

  7. Heavy metal contamination in the marine organisms in Yantai coast, northern Yellow Sea of China.

    PubMed

    Zhang, Gaosheng; Liu, Dongyan; Wu, Huifeng; Chen, Linlin; Han, Qingxi

    2012-08-01

    The port city of Yantai, in Shandong province China is located on Sishili Bay in the northern Yellow Sea. Intense human activity associated with urban sewage discharge, as well as industrial and maritime activities, have stressed the Sishili Bay coastal ecosystem with anthropogenic pollution. The aim of this study was to measure the levels of heavy metal in the sediment and marine organisms of economic value from various sites within Sishili Bay, and to evaluate the data in relation to the potential health risk on human consumers. For this purpose, sediment and wild shrimps and crab were collected from three areas (a total of 13 sampling sites) of the Yantai coast and analyzed for six heavy metals (Cu, Zn, Cr, Ni, Pb, and As). For comparison, the concentrations of the same heavy metals in seven kinds of mollusks obtained from local aquaculture were also determined. The findings showed that the concentrations of heavy metals in the sediment of Yantai coast followed the order Zn > ≈Cr > Cu ≈ Ni ≈ Pb > As, and all were within the safe levels of national standard. However, the concentrations of the heavy metals varied significantly in the organism samples, indicating the different accumulative abilities of the species sampled. For the wild marine organisms, Pb concentrations in some shrimp and crab samples exceeded the standard limit of seafood safety criteria and As concentrations in all samples were over the limit. Moreover, the As levels in mollusks from aquaculture exceeded the limit of seafood standard criteria. These results indicated that the heavy metal levels in the marine organisms in the studied areas were moderate but unacceptable for As from the view of safety of seafood. Furthermore, it is very necessary and important to further study toxicological and ecological effect of As in the coast of northern Yellow sea to understand the potential for risk to human and environmental health. PMID:22707040

  8. A New Laboratory Radio Frequency Identification (RFID) System for Behavioural Tracking of Marine Organisms

    PubMed Central

    Aguzzi, Jacopo; Sbragaglia, Valerio; Sarriá, David; García, José Antonio; Costa, Corrado; del Río, Joaquín; Mànuel, Antoni; Menesatti, Paolo; Sardà, Francesc

    2011-01-01

    Radio frequency identification (RFID) devices are currently used to quantify several traits of animal behaviour with potential applications for the study of marine organisms. To date, behavioural studies with marine organisms are rare because of the technical difficulty of propagating radio waves within the saltwater medium. We present a novel RFID tracking system to study the burrowing behaviour of a valuable fishery resource, the Norway lobster (Nephrops norvegicus L.). The system consists of a network of six controllers, each handling a group of seven antennas. That network was placed below a microcosm tank that recreated important features typical of Nephrops’ grounds, such as the presence of multiple burrows. The animals carried a passive transponder attached to their telson, operating at 13.56 MHz. The tracking system was implemented to concurrently report the behaviour of up to three individuals, in terms of their travelled distances in a specified unit of time and their preferential positioning within the antenna network. To do so, the controllers worked in parallel to send the antenna data to a computer via a USB connection. The tracking accuracy of the system was evaluated by concurrently recording the animals’ behaviour with automated video imaging. During the two experiments, each lasting approximately one week, two different groups of three animals each showed a variable burrow occupancy and a nocturnal displacement under a standard photoperiod regime (12 h light:12 h dark), measured using the RFID method. Similar results were obtained with the video imaging. Our implemented RFID system was therefore capable of efficiently tracking the tested organisms and has a good potential for use on a wide variety of other marine organisms of commercial, aquaculture, and ecological interest. PMID:22163710

  9. Cytotoxic and HIV-1 enzyme inhibitory activities of Red Sea marine organisms

    PubMed Central

    2014-01-01

    Background Cancer and HIV/AIDS are two of the greatest public health and humanitarian challenges facing the world today. Infection with HIV not only weakens the immune system leading to AIDS and increasing the risk of opportunistic infections, but also increases the risk of several types of cancer. The enormous biodiversity of marine habitats is mirrored by the molecular diversity of secondary metabolites found in marine animals, plants and microbes which is why this work was designed to assess the anti-HIV and cytotoxic activities of some marine organisms of the Red Sea. Methods The lipophilic fractions of methanolic extracts of thirteen marine organisms collected from the Red Sea (Egypt) were screened for cytotoxicity against two human cancer cell lines; leukaemia (U937) and cervical cancer (HeLa) cells. African green monkey kidney cells (Vero) were used as normal non-malignant control cells. The extracts were also tested for their inhibitory activity against HIV-1 enzymes, reverse transcriptase (RT) and protease (PR). Results Cytotoxicity results showed strong activity of the Cnidarian Litophyton arboreum against U-937 (IC50; 6.5 μg/ml ±2.3) with a selectivity index (SI) of 6.45, while the Cnidarian Sarcophyton trochliophorum showed strong activity against HeLa cells (IC50; 5.2 μg/ml ±1.2) with an SI of 2.09. Other species showed moderate to weak cytotoxicity against both cell lines. Two extracts showed potent inhibitory activity against HIV-1 protease; these were the Cnidarian jelly fish Cassiopia andromeda (IC50; 0.84 μg/ml ±0.05) and the red algae Galaxura filamentosa (2.6 μg/ml ±1.29). It is interesting to note that the most active extracts against HIV-1 PR, C. andromeda and G. filamentosa showed no cytotoxicity in the three cell lines at the highest concentration tested (100 μg/ml). Conclusion The strong cytotoxicity of the soft corals L. arboreum and S. trochliophorum as well as the anti-PR activity of the jelly fish C. andromeda and the red

  10. Genetic Diversity Affects the Daily Transcriptional Oscillations of Marine Microbial Populations

    PubMed Central

    Shilova, Irina N.; Robidart, Julie C.; DeLong, Edward F.; Zehr, Jonathan P.

    2016-01-01

    Marine microbial communities are genetically diverse but have robust synchronized daily transcriptional patterns at the genus level that are similar across a wide variety of oceanic regions. We developed a microarray-inspired gene-centric approach to resolve transcription of closely-related but distinct strains/ecotypes in high-throughput sequence data. Applying this approach to the existing metatranscriptomics datasets collected from two different oceanic regions, we found unique and variable patterns of transcription by individual taxa within the abundant picocyanobacteria Prochlorococcus and Synechococcus, the alpha Proteobacterium Pelagibacter and the eukaryotic picophytoplankton Ostreococcus. The results demonstrate that marine microbial taxa respond differentially to variability in space and time in the ocean. These intra-genus individual transcriptional patterns underlie whole microbial community responses, and the approach developed here facilitates deeper insights into microbial population dynamics. PMID:26751368

  11. Biofilm history and oxygen availability interact to affect habitat selection in a marine invertebrate.

    PubMed

    Lagos, Marcelo E; White, Craig R; Marshall, Dustin J

    2016-07-01

    In marine systems, oxygen availability varies at small temporal and spatial scales, such that current oxygen levels may not reflect conditions of the past. Different studies have shown that marine invertebrate larvae can select settlement sites based on local oxygen levels and oxygenation history of the biofilm, but no study has examined the interaction of both. The influence of normoxic and hypoxic water and oxygenation history of biofilms on pre-settlement behavior and settlement of the bryozoan Bugula neritina was tested. Larvae used cues in a hierarchical way: the oxygen levels in the water prime larvae to respond, the response to different biofilms is contingent on oxygen levels in the water. When oxygen levels varied throughout biofilm formation, larvae responded differently depending on the history of the biofilm. It appears that B. neritina larvae integrate cues about current and historical oxygen levels to select the appropriate microhabitat and maximize their fitness. PMID:27169475

  12. Environmental stability affects phenotypic evolution in a globally distributed marine picoplankton.

    PubMed

    Schaum, C-Elisa; Rost, Björn; Collins, Sinéad

    2016-01-01

    Marine phytoplankton can evolve rapidly when confronted with aspects of climate change because of their large population sizes and fast generation times. Despite this, the importance of environment fluctuations, a key feature of climate change, has received little attention-selection experiments with marine phytoplankton are usually carried out in stable environments and use single or few representatives of a species, genus or functional group. Here we investigate whether and by how much environmental fluctuations contribute to changes in ecologically important phytoplankton traits such as C:N ratios and cell size, and test the variability of changes in these traits within the globally distributed species Ostreococcus. We have evolved 16 physiologically distinct lineages of Ostreococcus at stable high CO2 (1031±87 μatm CO2, SH) and fluctuating high CO2 (1012±244 μatm CO2, FH) for 400 generations. We find that although both fluctuation and high CO2 drive evolution, FH-evolved lineages are smaller, have reduced C:N ratios and respond more strongly to further increases in CO2 than do SH-evolved lineages. This indicates that environmental fluctuations are an important factor to consider when predicting how the characteristics of future phytoplankton populations will have an impact on biogeochemical cycles and higher trophic levels in marine food webs. PMID:26125683

  13. Marine pharmacology in 2005–6: Marine Compounds with Anthelmintic, Antibacterial, Anticoagulant, Antifungal, Anti-inflammatory, Antimalarial, Antiprotozoal, Antituberculosis, and Antiviral Activities; affecting the Cardiovascular, Immune and Nervous Systems, and other Miscellaneous Mechanisms of Action

    PubMed Central

    Mayer, Alejandro M. S.; Rodriguez, Abimael D.; Berlinck, Roberto G. S.; Hamann, Mark T.

    2009-01-01

    BACKGROUND The review presents the 2005–2006 peer-reviewed marine pharmacology literature, and follows a similar format to the authors’ 1998–2004 reviews. The preclinical pharmacology of chemically characterized marine compounds isolated from marine animals, algae, fungi and bacteria is systematically presented. RESULTS Anthelminthic, antibacterial, anticoagulant, antifungal, antimalarial, antiprotozoal, antituberculosis and antiviral activities were reported for 78 marine chemicals. Additionally 47 marine compounds were reported to affect the cardiovascular, immune and nervous system as well as possess anti-inflammatory effects. Finally, 58 marine compounds were shown to bind to a variety of molecular targets, and thus could potentially contribute to several pharmacological classes. CONCLUSIONS Marine pharmacology research during 2005–2006 was truly global in nature, involving investigators from 32 countries, and the United States, and contributed 183 marine chemical leads to the research pipeline aimed at the discovery of novel therapeutic agents. SIGNIFICANCE Continued preclinical and clinical research with marine natural products demonstrating a broad spectrum of pharmacological activity and will probably result in novel therapeutic agents for the treatment of multiple disease categories. PMID:19303911

  14. Detecting marine hazardous substances and organisms: sensors for pollutants, toxins, and pathogens

    NASA Astrophysics Data System (ADS)

    Zielinski, O.; Busch, J. A.; Cembella, A. D.; Daly, K. L.; Engelbrektsson, J.; Hannides, A. K.; Schmidt, H.

    2009-05-01

    Marine environments are influenced by a wide diversity of anthropogenic and natural substances and organisms that may have adverse effects on human health and ecosystems. Real-time measurements of pollutants, toxins, and pathogens across a range of spatial scales are required to adequately monitor these hazards, manage the consequences, and to understand the processes governing their magnitude and distribution. Significant technological advancements have been made in recent years for the detection and analysis of such marine hazards. In particular, sensors deployed on a variety of mobile and fixed-point observing platforms provide a valuable means to assess hazards. In this review, we present state-of-the-art of sensor technology for the detection of harmful substances and organisms in the ocean. Sensors are classified by their adaptability to various platforms, addressing large, intermediate, or small areal scales. Current gaps and future demands are identified with an indication of the urgent need for new sensors to detect marine hazards at all scales in autonomous real-time mode. Progress in sensor technology is expected to depend on the development of small-scale sensor technologies with a high sensitivity and specificity towards target analytes or organisms. However, deployable systems must comply with platform requirements as these interconnect the three areal scales. Future developments will include the integration of existing methods into complex and operational sensing systems for a comprehensive strategy for long-term monitoring. The combination of sensor techniques on all scales will remain crucial for the demand of large spatial and temporal coverage.

  15. Detecting marine hazardous substances and organisms: sensors for pollutants, toxins, and pathogens

    NASA Astrophysics Data System (ADS)

    Zielinski, O.; Busch, J. A.; Cembella, A. D.; Daly, K. L.; Engelbrektsson, J.; Hannides, A. K.; Schmidt, H.

    2009-09-01

    Marine environments are influenced by a wide diversity of anthropogenic and natural substances and organisms that may have adverse effects on human health and ecosystems. Real-time measurements of pollutants, toxins, and pathogens across a range of spatial scales are required to adequately monitor these hazards, manage the consequences, and to understand the processes governing their magnitude and distribution. Significant technological advancements have been made in recent years for the detection and analysis of such marine hazards. In particular, sensors deployed on a variety of mobile and fixed-point observing platforms provide a valuable means to assess hazards. In this review, we present state-of-the-art of sensor technology for the detection of harmful substances and organisms in the ocean. Sensors are classified by their adaptability to various platforms, addressing large, intermediate, or small areal scales. Current gaps and future demands are identified with an indication of the urgent need for new sensors to detect marine hazards at all scales in autonomous real-time mode. Progress in sensor technology is expected to depend on the development of small-scale sensor technologies with a high sensitivity and specificity towards target analytes or organisms. However, deployable systems must comply with platform requirements as these interconnect the three areal scales. Future developments will include the integration of existing methods into complex and operational sensing systems for a comprehensive strategy for long-term monitoring. The combination of sensor techniques on all scales will remain crucial for the demand of large spatial and temporal coverage.

  16. Chromophoric Dissolved Organic Matter across a Marine Distributed Biological Observatory in the Pacific Arctic Region

    NASA Astrophysics Data System (ADS)

    Berman, S. L.; Frey, K. E.; Shake, K. L.; Cooper, L. W.; Grebmeier, J. M.

    2014-12-01

    Dissolved organic matter (DOM) plays an important role in marine ecosystems as both a carbon source for the microbial food web (and thus a source of CO2 to the atmosphere) and as a light inhibitor in marine environments. The presence of chromophoric dissolved organic matter (CDOM; the optically active portion of total DOM) can have significant controlling effects on transmittance of sunlight through the water column and therefore on primary production as well as the heat balance of the upper ocean. However, CDOM is also susceptible to photochemical degradation, which decreases the flux of solar radiation that is absorbed. Knowledge of the current spatial and temporal distribution of CDOM in marine environments is thus critical for understanding how ongoing and future changes in climate may impact these biological, biogeochemical, and physical processes. We describe the quantity and quality of CDOM along five key productive transects across a developing Distributed Biological Observatory (DBO) in the Pacific Arctic region. The samples were collected onboard the CCGS Sir Wilfred Laurier in July 2013 and 2014. Monitoring of the variability of CDOM along transects of high productivity can provide important insights into biological and biogeochemical cycling across the region. Our analyses include overall concentrations of CDOM, as well as proxy information such as molecular weight, lability, and source (i.e., autochthonous vs. allochthonous) of organic matter. We utilize these field observations to compare with satellite-derived CDOM concentrations determined from the Aqua MODIS satellite platform, which ultimately provides a spatially and temporally continuous synoptic view of CDOM concentrations throughout the region. Examining the current relationships among CDOM, sea ice variability, biological productivity, and biogeochemical cycling in the Pacific Arctic region will likely provide key insights for how ecosystems throughout the region will respond in future

  17. ACCURACY OF PESTICIDE REFERENCE STANDARD SOLUTIONS. PART I. FACTORS AFFECTING ORGANIC SOLVENT EVAPORATION

    EPA Science Inventory

    A gravimetric experiment was undertaken to identify the factors affecting solvent evaporation from analytical reference standard solutions and to establish the magnitude of the resultant solvent evaporation. The evaporation of organic solvent from standard solutions is affected b...

  18. Butenolide inhibits marine fouling by altering the primary metabolism of three target organisms.

    PubMed

    Zhang, Yi-Fan; Zhang, Huoming; He, Lisheng; Liu, Changdong; Xu, Ying; Qian, Pei-Yuan

    2012-06-15

    Butenolide is a very promising antifouling compound that inhibits ship hull fouling by a variety of marine organisms, but its antifouling mechanism was previously unknown. Here we report the first study of butenolide's molecular targets in three representative fouling organisms. In the barnacle Balanus (=Amphibalanus) amphitrite, butenolide bound to acetyl-CoA acetyltransferase 1 (ACAT1), which is involved in ketone body metabolism. Both the substrate and the product of ACAT1 increased larval settlement under butenolide treatment, suggesting its functional involvement. In the bryozoan Bugula neritina, butenolide bound to very long chain acyl-CoA dehydrogenase (ACADVL), actin, and glutathione S-transferases (GSTs). ACADVL is the first enzyme in the very long chain fatty acid β-oxidation pathway. The inhibition of this primary pathway for energy production in larvae by butenolide was supported by the finding that alternative energy sources (acetoacetate and pyruvate) increased larval attachment under butenolide treatment. In marine bacterium Vibrio sp. UST020129-010, butenolide bound to succinyl-CoA synthetase β subunit (SCSβ) and inhibited bacterial growth. ACAT1, ACADVL, and SCSβ are all involved in primary metabolism for energy production. These findings suggest that butenolide inhibits fouling by influencing the primary metabolism of target organisms. PMID:22458453

  19. Impacts of ocean acidification on marine organisms: quantifying sensitivities and interaction with warming

    PubMed Central

    Kroeker, Kristy J; Kordas, Rebecca L; Crim, Ryan; Hendriks, Iris E; Ramajo, Laura; Singh, Gerald S; Duarte, Carlos M; Gattuso, Jean-Pierre

    2013-01-01

    Ocean acidification represents a threat to marine species worldwide, and forecasting the ecological impacts of acidification is a high priority for science, management, and policy. As research on the topic expands at an exponential rate, a comprehensive understanding of the variability in organisms' responses and corresponding levels of certainty is necessary to forecast the ecological effects. Here, we perform the most comprehensive meta-analysis to date by synthesizing the results of 228 studies examining biological responses to ocean acidification. The results reveal decreased survival, calcification, growth, development and abundance in response to acidification when the broad range of marine organisms is pooled together. However, the magnitude of these responses varies among taxonomic groups, suggesting there is some predictable trait-based variation in sensitivity, despite the investigation of approximately 100 new species in recent research. The results also reveal an enhanced sensitivity of mollusk larvae, but suggest that an enhanced sensitivity of early life history stages is not universal across all taxonomic groups. In addition, the variability in species' responses is enhanced when they are exposed to acidification in multi-species assemblages, suggesting that it is important to consider indirect effects and exercise caution when forecasting abundance patterns from single-species laboratory experiments. Furthermore, the results suggest that other factors, such as nutritional status or source population, could cause substantial variation in organisms' responses. Last, the results highlight a trend towards enhanced sensitivity to acidification when taxa are concurrently exposed to elevated seawater temperature. PMID:23505245

  20. Recreational Diver Behavior and Contacts with Benthic Organisms in the Abrolhos National Marine Park, Brazil

    NASA Astrophysics Data System (ADS)

    Giglio, Vinicius J.; Luiz, Osmar J.; Schiavetti, Alexandre

    2016-03-01

    In the last two decades, coral reefs have become popular among recreational divers, especially inside marine protected areas. However, the impact caused by divers on benthic organisms may be contributing to the degradation of coral reefs. We analyzed the behavior of 142 scuba divers in the Abrolhos National Marine Park, Brazil. We tested the effect of diver profile, reef type, use of additional equipment, timing, and group size on diver behavior and their contacts with benthic organisms. Eighty-eight percent of divers contacted benthic organism at least once, with an average of eight touches and one damage per dive. No significant differences in contacts were verified among gender, group size, or experience level. Artificial reef received a higher rate of contact than pinnacle and fringe reefs. Specialist photographers and sidemount users had the highest rates, while non-users of additional equipment and mini camera users had the lowest contact rates. The majority of contacts were incidental and the highest rates occurred in the beginning of a dive. Our findings highlight the need of management actions, such as the provision of pre-dive briefing including ecological aspects of corals and beginning dives over sand bottoms or places with low coral abundance. Gathering data on diver behavior provides managers with information that can be used for tourism management.

  1. Recreational Diver Behavior and Contacts with Benthic Organisms in the Abrolhos National Marine Park, Brazil.

    PubMed

    Giglio, Vinicius J; Luiz, Osmar J; Schiavetti, Alexandre

    2016-03-01

    In the last two decades, coral reefs have become popular among recreational divers, especially inside marine protected areas. However, the impact caused by divers on benthic organisms may be contributing to the degradation of coral reefs. We analyzed the behavior of 142 scuba divers in the Abrolhos National Marine Park, Brazil. We tested the effect of diver profile, reef type, use of additional equipment, timing, and group size on diver behavior and their contacts with benthic organisms. Eighty-eight percent of divers contacted benthic organism at least once, with an average of eight touches and one damage per dive. No significant differences in contacts were verified among gender, group size, or experience level. Artificial reef received a higher rate of contact than pinnacle and fringe reefs. Specialist photographers and sidemount users had the highest rates, while non-users of additional equipment and mini camera users had the lowest contact rates. The majority of contacts were incidental and the highest rates occurred in the beginning of a dive. Our findings highlight the need of management actions, such as the provision of pre-dive briefing including ecological aspects of corals and beginning dives over sand bottoms or places with low coral abundance. Gathering data on diver behavior provides managers with information that can be used for tourism management. PMID:26614350

  2. Toxicity of Nano-Zero Valent Iron to Freshwater and Marine Organisms

    PubMed Central

    Keller, Arturo A.; Garner, Kendra; Miller, Robert J.; Lenihan, Hunter S.

    2012-01-01

    We tested whether three commercial forms (uncoated, organic coating, and iron oxide coating) of nano zero-valent iron (nZVI) are toxic to freshwater and marine organisms, specifically three species of marine phytoplankton, one species of freshwater phytoplankton, and a freshwater zooplankton species (Daphnia magna), because these organisms may be exposed downstream of where nZVI is applied to remediate polluted soil. The aggregation and reactivity of the three types of nZVI varied considerably, which was reflected in their toxicity. Since levels of Fe2+ and Fe3+ increase as the nZVI react, we also evaluated their toxicity independently. All four phytoplankton species displayed decreasing population growth rates, and Daphnia magna showed increasing mortality, in response to increasing levels of nZVI, and to a lesser degree with increasing Fe2+ and Fe3+. All forms of nZVI aggregated in soil and water, especially in the presence of a high concentration of calcium ions in groundwater, thus reducing their transports through the environment. However, uncoated nZVI aggregated extremely rapidly, thus vastly reducing the probability of environmental transport and potential for toxicity. This information can be used to design a risk management strategy to arrest the transport of injected nZVI beyond the intended remediation area, by injecting inert calcium salts as a barrier to transport. PMID:22952836

  3. Impacts of ocean acidification on marine organisms: quantifying sensitivities and interaction with warming.

    PubMed

    Kroeker, Kristy J; Kordas, Rebecca L; Crim, Ryan; Hendriks, Iris E; Ramajo, Laura; Singh, Gerald S; Duarte, Carlos M; Gattuso, Jean-Pierre

    2013-06-01

    Ocean acidification represents a threat to marine species worldwide, and forecasting the ecological impacts of acidification is a high priority for science, management, and policy. As research on the topic expands at an exponential rate, a comprehensive understanding of the variability in organisms' responses and corresponding levels of certainty is necessary to forecast the ecological effects. Here, we perform the most comprehensive meta-analysis to date by synthesizing the results of 228 studies examining biological responses to ocean acidification. The results reveal decreased survival, calcification, growth, development and abundance in response to acidification when the broad range of marine organisms is pooled together. However, the magnitude of these responses varies among taxonomic groups, suggesting there is some predictable trait-based variation in sensitivity, despite the investigation of approximately 100 new species in recent research. The results also reveal an enhanced sensitivity of mollusk larvae, but suggest that an enhanced sensitivity of early life history stages is not universal across all taxonomic groups. In addition, the variability in species' responses is enhanced when they are exposed to acidification in multi-species assemblages, suggesting that it is important to consider indirect effects and exercise caution when forecasting abundance patterns from single-species laboratory experiments. Furthermore, the results suggest that other factors, such as nutritional status or source population, could cause substantial variation in organisms' responses. Last, the results highlight a trend towards enhanced sensitivity to acidification when taxa are concurrently exposed to elevated seawater temperature. PMID:23505245

  4. Activities of bioprotection systems of marine organisms representative of coastal ecosystems in the Mediterranean Sea

    SciTech Connect

    Narbonne, J.F.; Garrigues, P.; Monod, J.L.; Lafaurie, M. )

    1988-09-01

    With a view to applying the biochemical tests under study to the monitoring of sea pollutants, they have created, together with a number of laboratories, the G.I.C.B.E.M. (Groupe Interface Chimie Biologie Ecosystemes Marins). The special characteristic of this program is to provide a global evaluation of the health of a marine ecosystem by studying in situ the correlations existing between the activity levels of bioprotection systems (biotransformation of organic pollutants, induction of metallothioneins) in coastal benthic organisms and the presence of potentially toxic molecules in the environment. A discerning selection of sampling sites in the Mediterranean exhibiting well-known pollution of various origins (heavy metals, HAP, PCB, lindane {hor ellipsis}) and at various degrees, should allow the determination of the bioprotection systems as well as of their activity levels. Thus, a global evaluation of the health of a given system and a quick warning as to the presence of potentially toxic substances in the environment will be made possible by applying a battery of suitable and simple tests on representative organisms.

  5. Radiocarbon ages of sedimentary lipids as tracers of organic carbon input to marine sediments

    SciTech Connect

    Eglinton, T.I.; Nelson, B.; McNichol, A.P.

    1996-10-01

    A novel analytical approach, Preparative Capillary Gas Chromatography (PCGC), has been used to isolate sufficient quantities of individual hydrocarbon lipids from two marine surface sediments (Black Sea, Arabian Sea) for radiocarbon dating by Accelerator Mass Spectrometry (AMS). {Delta}{sup 14}C values for bulk sedimentary organic carbon (OC) from the Black and Arabian Sea samples are -105 and -112{per_thousand} respectively. In the Black Sea, extended [higher plant] n-alkanes (n-C{sub 29}, n-C{sub 31}) are significantly enriched relative to bulk OC (ave -80{per_thousand}), indicating input of {open_quotes}fresh{close_quotes} terrestrial organic matter, while shorter chain homologues (n-C{sub 23}, n-C{sub 25}) exhibit depleted (ca. -160{per_thousand}) values, in keeping with the total hydrocarbon fraction (-150{per_thousand}). Arabian Sea hydrocarbons exhibit a much wider range of {Delta}{sup 14}C values (from -38 to -780{per_thousand}). Markers for diatoms (highly branched isoprenoid alkenes) show the youngest radiocarbon ages while saturated hydrocarbons display the oldest ages. We interpret these variations in terms of uptake of atmospheric CO{sub 2} and contributions from relic carbon sources. These and related data will be discussed in the context of organic carbon input and preservation in these marine systems.

  6. Sources and composition of submicron organic mass in marine aerosol particles

    NASA Astrophysics Data System (ADS)

    Frossard, Amanda A.; Russell, Lynn M.; Burrows, Susannah M.; Elliott, Scott M.; Bates, Timothy S.; Quinn, Patricia K.

    2014-11-01

    The sources and composition of atmospheric marine aerosol particles (aMA) have been investigated with a range of physical and chemical measurements from open-ocean research cruises. This study uses the characteristic functional group composition (from Fourier transform infrared spectroscopy) of aMA from five ocean regions to show the following: (i) The organic functional group composition of aMA that can be identified as mainly atmospheric primary marine (ocean derived) aerosol particles (aPMA) is 65 ± 12% hydroxyl, 21 ± 9% alkane, 6 ± 6% amine, and 7 ± 8% carboxylic acid functional groups. Contributions from photochemical reactions add carboxylic acid groups (15%-25%), shipping effluent in seawater and ship emissions add additional alkane groups (up to 70%), and coastal or continental emissions mix in alkane and carboxylic acid groups. (ii) The organic composition of aPMA is nearly identical to model-generated primary marine aerosol particles from bubbled seawater (gPMA, which has 55 ± 14% hydroxyl, 32 ± 14% alkane, and 13 ± 3% amine functional groups), indicating that its overall functional group composition is the direct consequence of the organic constituents of the seawater source. (iii) While the seawater organic functional group composition was nearly invariant across all three ocean regions studied and the ratio of organic carbon to sodium (OC/Na+) in the gPMA remained nearly constant over a broad range of chlorophyll a concentrations, the gPMA alkane group fraction appeared to increase with chlorophyll a concentrations (r = 0.66). gPMA from productive seawater had a larger fraction of alkane functional groups (42 ± 9%) compared to gPMA from nonproductive seawater (22 ± 10%), perhaps due to the presence of surfactants in productive seawater that stabilize the bubble film and lead to preferential drainage of the more soluble (lower alkane group fraction) organic components. gPMA has a hydroxyl group absorption peak location characteristic of

  7. Integrated network modelling for identifying microbial mechanisms of particulate organic carbon accumulation in coastal marine systems

    NASA Astrophysics Data System (ADS)

    McDonald, Karlie; Turk, Valentina; Mozetič, Patricija; Tinta, Tinkara; Malfatti, Francesca; Hannah, David; Krause, Stefan

    2016-04-01

    Accumulation of particulate organic carbon (POC) has the potential to change the structure and function of marine ecosystems. High abidance of POC can develop into aggregates, known as marine snow or mucus aggregates that can impair essential marine ecosystem functioning and services. Currently marine POC formation, accumulation and sedimentation processes are being explored as potential pathways to remove CO2 from the atmosphere by CO2 sequestration via fixation into biomass by phytoplankton. However, the current ability of scientists, environmental managers and regulators to analyse and predict high POC concentrations is restricted by the limited understanding of the dynamic nature of the microbial mechanisms regulating POC accumulation events in marine environments. We present a proof of concept study that applies a novel Bayesian Networks (BN) approach to integrate relevant biological and physical-chemical variables across spatial and temporal scales in order to identify the interactions of the main contributing microbial mechanisms regulating POC accumulation in the northern Adriatic Sea. Where previous models have characterised only the POC formed, the BN approach provides a probabilistic framework for predicting the occurrence of POC accumulation by linking biotic factors with prevailing environmental conditions. In this paper the BN was used to test three scenarios (diatom, nanoflagellate, and dinoflagellate blooms). The scenarios predicted diatom blooms to produce high chlorophyll a at the water surface while nanoflagellate blooms were predicted to occur at lower depths (> 6m) in the water column and produce lower chlorophyll a concentrations. A sensitivity analysis identified the variables with the greatest influence on POC accumulation being the enzymes protease and alkaline phosphatase, which highlights the importance of microbial community interactions. The developed proof of concept BN model allows for the first time to quantify the impacts of

  8. NIST SRM 1945, whale blubber, NIST SRM 1974a, organics in mussel tissue, and NIST SRM 1941a, organics in marine sediment as certified reference materials for polychlorinated dioxins and furans in marine ecosystems.

    PubMed

    Chambers, L; Gardinali, P; Chambers, H; Wade, T L; Jackson, T; Brooks, J M

    1996-01-01

    Few natural matrix Standard Reference Materials are available for the validation of analytical methods measuring polychlorinated dioxins and furans (PCDDs and PCDFs) in marine ecosystems. The concentrations of PCDDs and PCDFs in NIST SRM 1945, SRM 1974a, and SRM 1941a are of interest because the analysis of marine mammal, mussel tissues and sediments have become important tools in the determination of organochlorine contamination of the environment. Because these SRMs have been demonstrated to be homogenous for other organic contaminants, they would be expected to be reliable standards for validation of polychlorinated dioxins and furans in marine mammals, mussels and sediments as well. PMID:8564434

  9. Schizotypy as An Organizing Framework for Social and Affective Sciences

    PubMed Central

    Cohen, Alex S.; Mohr, Christine; Ettinger, Ulrich; Chan, Raymond C. K.; Park, Sohee

    2015-01-01

    Schizotypy, defined in terms of commonly occurring personality traits related to the schizophrenia spectrum, has been an important construct for understanding the neurodevelopment and stress-diathesis of schizophrenia. However, as schizotypy nears its sixth decade of application, it is important to acknowledge its impressively rich literature accumulating outside of schizophrenia research. In this article, we make the case that schizotypy has considerable potential as a conceptual framework for understanding individual differences in affective and social functions beyond those directly involved in schizophrenia spectrum pathology. This case is predicated on (a) a burgeoning literature noting anomalies in a wide range of social functioning, affiliative, positive and negative emotional, expressive, and social cognitive systems, (b) practical and methodological features associated with schizotypy research that help facilitate empirical investigation, and (c) close ties to theoretical constructs of central importance to affective and social science (eg, stress diathesis, neural compensation). We highlight recent schizotypy research, ie providing insight into the nature of affective and social systems more generally. This includes current efforts to clarify the neurodevelopmental, neurobiological, and psychological underpinnings of affiliative drives, hedonic capacity, social cognition, and stress responsivity systems. Additionally, we discuss neural compensatory and resilience factors that may mitigate the expression of stress-diathesis and functional outcome, and highlight schizotypy’s potential role for understanding cultural determinants of social and affective functions. PMID:25810057

  10. Schizotypy as an organizing framework for social and affective sciences.

    PubMed

    Cohen, Alex S; Mohr, Christine; Ettinger, Ulrich; Chan, Raymond C K; Park, Sohee

    2015-03-01

    Schizotypy, defined in terms of commonly occurring personality traits related to the schizophrenia spectrum, has been an important construct for understanding the neurodevelopment and stress-diathesis of schizophrenia. However, as schizotypy nears its sixth decade of application, it is important to acknowledge its impressively rich literature accumulating outside of schizophrenia research. In this article, we make the case that schizotypy has considerable potential as a conceptual framework for understanding individual differences in affective and social functions beyond those directly involved in schizophrenia spectrum pathology. This case is predicated on (a) a burgeoning literature noting anomalies in a wide range of social functioning, affiliative, positive and negative emotional, expressive, and social cognitive systems, (b) practical and methodological features associated with schizotypy research that help facilitate empirical investigation, and (c) close ties to theoretical constructs of central importance to affective and social science (eg, stress diathesis, neural compensation). We highlight recent schizotypy research, ie providing insight into the nature of affective and social systems more generally. This includes current efforts to clarify the neurodevelopmental, neurobiological, and psychological underpinnings of affiliative drives, hedonic capacity, social cognition, and stress responsivity systems. Additionally, we discuss neural compensatory and resilience factors that may mitigate the expression of stress-diathesis and functional outcome, and highlight schizotypy's potential role for understanding cultural determinants of social and affective functions. PMID:25810057

  11. Food quality determines sediment community responses to marine vs. terrigenous organic matter in a submarine canyon

    NASA Astrophysics Data System (ADS)

    Hunter, W. R.; Jamieson, A.; Huvenne, V. A. I.; Witte, U.

    2012-08-01

    The Whittard canyon is a branching submarine canyon on the Celtic continental margin, which may act as a conduit for sediment and organic matter (OM) transport from the European continental slope to the abyssal sea floor. In situ stable-isotope labelling experiments were conducted in the eastern and western branches of the Whittard canyon testing short term (3-7 day) responses of sediment communities to deposition of nitrogen-rich marine (Thallassiosira weissflogii) and nitrogen-poor terrigenous (Triticum aestivum) phytodetritus. 13C and 15N labels were traced into faunal biomass and bulk sediments, and the 13C label traced into bacterial polar lipid fatty acids (PLFAs). Isotopic labels penetrated to 5 cm sediment depth, with no differences between stations or experimental treatments (substrate or time). Macrofaunal assemblage structure differed between the eastern and western canyon branches. Following deposition of marine phytodetritus, no changes in macrofaunal feeding activity were observed between the eastern and western branches, with little change between 3 and 7 days. Macrofaunal C and N uptake was substantially lower following deposition of terrigenous phytodetritus with feeding activity governed by a strong N demand. Bacterial C uptake was greatest, in the western branch of the Whittard canyon, but feeding activity decreased between 3 and 7 days. Bacterial processing of marine and terrigenous OM were similar to the macrofauna in surficial (0-1 cm) sediments. However, in deeper sediments bacteria utilised greater proportions of terrigenous OM. Bacterial biomass decreased following phytodetritus deposition and was negatively correlated to macrofaunal feeding activity. Consequently, this study suggests that macrofaunal-bacterial interactions influence benthic C cycling in the Whittard canyon, resulting in differential fates for marine and terrigenous OM.

  12. Sediment community responses to marine vs. terrigenous organic matter in a submarine canyon

    NASA Astrophysics Data System (ADS)

    Hunter, W. R.; Jamieson, A.; Huvenne, V. A. I.; Witte, U.

    2013-01-01

    The Whittard Canyon is a branching submarine canyon on the Celtic continental margin, which may act as a conduit for sediment and organic matter (OM) transport from the European continental slope to the abyssal sea floor. In situ stable-isotope labelling experiments were conducted in the eastern and western branches of the Whittard Canyon, testing short-term (3-7 days) responses of sediment communities to deposition of nitrogen-rich marine (Thalassiosira weissflogii) and nitrogen-poor terrigenous (Triticum aestivum) phytodetritus. 13C and 15N labels were traced into faunal biomass and bulk sediments, and the 13C label traced into bacterial polar lipid fatty acids (PLFAs). Isotopic labels penetrated to 5 cm sediment depth, with no differences between stations or experimental treatments (substrate or time). Macrofaunal assemblage structure differed between the eastern and western canyon branches. Following deposition of marine phytodetritus, no changes in macrofaunal feeding activity were observed between the eastern and western branches, with little change between 3 and 7 days. Macrofaunal C and N uptake was substantially lower following deposition of terrigenous phytodetritus with feeding activity governed by a strong N demand. Bacterial C uptake was greatest in the western branch of the Whittard Canyon, but feeding activity decreased between 3 and 7 days. Bacterial processing of marine and terrigenous OM were similar to the macrofauna in surficial (0-1 cm) sediments. However, in deeper sediments bacteria utilised greater proportions of terrigenous OM. Bacterial biomass decreased following phytodetritus deposition and was negatively correlated to macrofaunal feeding activity. Consequently, this study suggests that macrofaunal-bacterial interactions influence benthic C cycling in the Whittard Canyon, resulting in differential fates for marine and terrigenous OM.

  13. A fish-feeding laboratory bioassay to assess the antipredatory activity of secondary metabolites from the tissues of marine organisms.

    PubMed

    Marty, Micah J; Pawlik, Joseph R

    2015-01-01

    Marine chemical ecology is a young discipline, having emerged from the collaboration of natural products chemists and marine ecologists in the 1980s with the goal of examining the ecological functions of secondary metabolites from the tissues of marine organisms. The result has been a progression of protocols that have increasingly refined the ecological relevance of the experimental approach. Here we present the most up-to-date version of a fish-feeding laboratory bioassay that enables investigators to assess the antipredatory activity of secondary metabolites from the tissues of marine organisms. Organic metabolites of all polarities are exhaustively extracted from the tissue of the target organism and reconstituted at natural concentrations in a nutritionally appropriate food matrix. Experimental food pellets are presented to a generalist predator in laboratory feeding assays to assess the antipredatory activity of the extract. The procedure described herein uses the bluehead, Thalassoma bifasciatum, to test the palatability of Caribbean marine invertebrates; however, the design may be readily adapted to other systems. Results obtained using this laboratory assay are an important prelude to field experiments that rely on the feeding responses of a full complement of potential predators. Additionally, this bioassay can be used to direct the isolation of feeding-deterrent metabolites through bioassay-guided fractionation. This feeding bioassay has advanced our understanding of the factors that control the distribution and abundance of marine invertebrates on Caribbean coral reefs and may inform investigations in diverse fields of inquiry, including pharmacology, biotechnology, and evolutionary ecology. PMID:25650625

  14. Origin of particulate organic carbon in the marine atmosphere as indicated by it stable carbon isotopic composition

    SciTech Connect

    Chesselet, R.; Fontugne, M.; Buat-Menard, P.; Ezat, U.; Lambert, C.E.

    1981-04-01

    Organic carbon concentration and isotopic composition were determined in samples of atmospheric particulate matter collected in 1979 at remote marine locations (Enewetak atoll, Sargasso Sea) during the SEAREX (Sea-Air Exchange) program field experiments. Atmospheric Particulate Organic Carbon (POC) concentrations were found to be in the range of 0.3 to 1.2 mg. m/sup -3/, in agreement with previous literature data. The major mass of POC was found on the smallest particles (r<0.5 mm). The /sup 13/C//sup 12/C of the small particles is close to the one expected (d/sup 13/C = 26 +- 2/sup 0///sub infinity/) for atmospheric POC of continental origin. For all the samples analysed so far, it appears that more than 80% of atmospheric POC over remote marine areas is of continental origin. This can be explained either by long-range transport of small sized continental organic aserosols or by the production of POC in the marine atmosphere from a vapor phase organic carbon pool of continental origin. The POC in the large size fraction of marine aerosols (<20% of the total concentration) is likely to have a direct marine origin since its carbon isotopic composition is close to the expected value (d/sup 13/C = -21 +- 2/sup 0///sub 00/) for POC associated with sea-salt droplets transported to the marine atmosphere.

  15. Control of organic matter on the magnetic properties of surficial marine sediments. A simple kinetic model

    NASA Astrophysics Data System (ADS)

    Mohamed Falcon, K. J.; Andrade, A.; Rey, D.; Rubio, B.

    2014-12-01

    Magnetic properties of marine sediments in the Galician Rias, in NW Spain, have shown that in these shallow marine settings the magnetic mineral assemblage, and its bulk magnetic properties, is controlled by grain size, wave climate, and organic matter content. The grain size effect is explained by concentration of diamagnetic biogenic carbonates in the coarse fraction, which dilutes the concentration-dependent magnetic properties. Furthermore, this effect is enhanced by the hydrodynamic sorting of the heavy minerals, like magnetite, that become concentrated in the finer fractions. Waves on the other hand concentrate the coarser bioclasts in the shallower areas along the coastal margins of the rias, and consequently these areas show the lowest magnetic mineral concentrations. Magnetic minerals are therefore more abundant in the deeper central axis and towards the external, more oceanic, areas of the rias. Another effect of waves is periodic resuspension of fine sediments, which allows them to be reoxigenated preventing the onset of reductive diagenesis. This effect is best seen in sediment cores, where organic matter remineralization promotes dissolution of magnetic iron oxides and oxyhydroxides. Areas where resuspension is frequent and/or deeper areas where sediments stay in the water column for longer have lower degrees of reductive early diagenesis. In addition to its downcore effect, organic matter also controls the magnetic properties of surficial sediments. Our results in the Ria de Muros, at the north of our study area, have shown that a simple kinetic model is enough to quantify the effect of organic matter content on the dissolution of magnetite. We have found that a Total Organic Carbon increase of 0.35% reduces magnetite concentration of surface samples by half. These effects observed in the Ria de Muros have also been confirmed for published results in the southern Rias Baixas previously studied by our research group.

  16. Molecular insights into the microbial formation of marine dissolved organic matter: recalcitrant or labile?

    NASA Astrophysics Data System (ADS)

    Koch, B. P.; Kattner, G.; Witt, M.; Passow, U.

    2014-02-01

    The degradation of marine dissolved organic matter (DOM) is an important control variable in the global carbon cycle and dependent on the DOM composition. For our understanding of the kinetics of organic matter cycling in the ocean, it is therefore crucial to achieve a mechanistic and molecular understanding of its transformation processes. A long-term microbial experiment was performed to follow the production of non-labile DOM by marine bacteria. Two different glucose concentrations and dissolved algal exudates were used as substrates. We monitored the bacterial abundance, concentrations of dissolved and particulate organic carbon (DOC, POC), nutrients, amino acids, and transparent exopolymer particles (TEP) for two years. Ultrahigh resolution Fourier Transform Ion Cyclotron Resonance Mass Spectrometry (FT-ICR-MS) allowed the molecular characterization of extracted DOM after 70 days and after ∼2 years of incubation. Although glucose was quickly degraded, a DOC background was generated in glucose incubations. Only 20% of the organic carbon from algal exudate was degraded within the 2 years of incubation. TEP, which are released by micro-organisms, were produced during glucose degradation but decreased within less than three weeks back to half of the maximum concentration and were below detection in all treatments after 2 years. The molecular analysis demonstrated that DOM generated during glucose degradation differed appreciably from DOM produced during the degradation of the algal exudates. Our results led to several conclusions: (i) Higher substrate levels result in a higher level of non-labile DOC which is an important prerequisite for carbon sequestration in the ocean; (ii) TEP are generated by bacteria but are also degraded rapidly, thus limiting their potential contribution to carbon sequestration; (iii) The molecular signatures of DOM derived from algal exudates or glucose after 70 days of incubation differed strongly from refractory DOM. After 2 years

  17. Patterns of morphological integration in marine modular organisms: supra-module organization in branching octocoral colonies.

    PubMed Central

    Sánchez, Juan Armando; Lasker, Howard R

    2003-01-01

    Despite the relative simplicity of their modular growth, marine invertebrates such as arborescent gorgonian octocorals (Octocorallia: Cnidaria) generate complex colonial forms. Colony form in these taxa is a consequence of modular (polyp) replication, and if there is a tight integration among modular and supramodular traits (e.g. polyp aperture, inter-polyp spacing, branch thickness, internode and branch length), then changes at the module level may lead to changes in colony architecture. Alternatively, different groups of traits may evolve semi-independently (or conditionally independent). To examine the patterns of integration among morphological traits in Caribbean octocorals, we compared five morphological traits across 21 species, correcting for the effects of phylogenetic relationships among the taxa. Graphical modelling and phylogenetic independence contrasts among the five morphological characters indicate two groups of integrated traits based on whether they were polyp- or colony-level traits. Although all characters exhibited bivariate associations, multivariate analyses (partial correlation coefficients) showed the strongest integration among the colony-level characters (internode distance and branch length). It is a quantitative demonstration that branching characters within the octocorals studied are independent of characters of the polyps. Despite the universally recognized modularity of octocorals at the level of polyps, branching during colony development may represent an emergent level of integration and modularity. PMID:14561292

  18. Marine and Lacustrine Organic-rich Sedimentary Unit Time Markers: Implications from Rhenium-Osmium Geochronology

    NASA Astrophysics Data System (ADS)

    Selby, D.

    2011-12-01

    Geochronology is fundamental to understand the age, rates and durations of Earth processes. This concerned Arthur Holmes who, for much of his career, attempted to define a geological time scale. This is a topic still important to Earth Scientists today, specifically the chronostratigraphy of sedimentary rocks. Here I explore the Re-Os geochronology of marine and lacustrine sedimentary rocks and its application to yield absolute time constraints for stratigraphy. The past decade has seen the pioneering research of Re-Os organic-rich sedimentary rock geochronology blossom into a tool that can now to be used to accurately and precisely determine depositional ages of organic-rich rock units that have experienced up to low grade greenschist metamorphism. This direct dating of sedimentary rocks is critical where volcanic horizons are absent. As a result, this tool has been applied to timescale calibration, basin correlation, formation duration and the timing of key Earth events (e.g., Neoproterozoic glaciations). The application of Re-Os chronometer to the Devonian-Mississippian boundary contained within the Exshaw Formation, Canada, determined an age of 361.3 ± 2.4 Ma. This age is in accord with U-Pb dates of interbedded tuff horizons and also U-Pb zircon date for the type Devonian-Mississippian Hasselbachtal section, Germany. The agreement of the biostratigraphic and U-Pb constraints of the Exshaw Formation with the Re-Os date illustrated the potential of the Re-Os chronometer to yield age determinations for sedimentary packages, especially in the absence of interbedd tuff horizons and biozones. A Re-Os date for the proposed type section of the Oxfordian-Kimmeridgian boundary, Staffin Bay, Isle of Skye, U.K., gave an age of 154.1 ± 2.2 Ma. This Re-Os age presents a 45 % (1.8 Ma) improvement in precision for the basal Kimmeridgian. It also demonstrated that the duration of the Kimmeridgian is nominally 3.3 Ma and thus is 1.6 Ma shorter than previously indicated. In

  19. Active Marine Subsurface Bacterial Population Composition in Low Organic Carbon Environments from IODP Expedition 320

    NASA Astrophysics Data System (ADS)

    Shepard, A.; Reese, B. K.; Mills, H. J.; IODP Expedition 320 Shipboard Science Party

    2011-12-01

    The marine subsurface environment contains abundant and active microorganisms. These microbial populations are considered integral players in the marine subsurface biogeochemical system with significance in global geochemical cycles and reservoirs. However, variations in microbial community structure, activity and function associated with the wide-ranging sedimentary and geochemical environments found globally have not been fully resolved. Integrated Ocean Drilling Program Expedition 320 recovered sediments from site U1332. Two sampling depths were selected for analysis that spanned differing lithological units in the sediment core. Sediments were composed of mostly clay with zeolite minerals at 8 meters below sea floor (mbsf). At 27 mbsf, sediments were composed of alternating clayey radiolarian ooze and nannofossil ooze. The concentration of SO42- had little variability throughout the core and the concentration of Fe2+ remained close to, or below, detection limits (0.4 μM). Total organic carbon content ranged from a low of 0.03 wt% to a high of 0.07 wt% between 6 and 30 mbsf providing an opportunity to evaluate marine subsurface microbial communities under extreme electron donor limiting conditions. The metabolically active fraction of the bacterial population was isolated by the extraction and amplification of 16S ribosomal RNA. Pyrosequencing of 16S rRNA transcripts and subsequent bioinformatic analyses provided a robust data set (15,931 total classified sequences) to characterize the community at a high resolution. As observed in other subsurface environments, the overall diversity of active bacterial populations decreased with depth. The population shifted from a diverse but evenly distributed community at approximately 8 mbsf to a Firmicutes dominated population at 27 mbsf (80% of sequences). A total of 95% of the sequences at 27 mbsf were grouped into three genera: Lactobacillus (phylum Firmicutes) at 80% of the total sequences, Marinobacter (phylum

  20. Deciphering associations between dissolved organic molecules and bacterial communities in a pelagic marine system.

    PubMed

    Osterholz, Helena; Singer, Gabriel; Wemheuer, Bernd; Daniel, Rolf; Simon, Meinhard; Niggemann, Jutta; Dittmar, Thorsten

    2016-07-01

    Dissolved organic matter (DOM) is the main substrate and energy source for heterotrophic bacterioplankton. To understand the interactions between DOM and the bacterial community (BC), it is important to identify the key factors on both sides in detail, chemically distinct moieties in DOM and the various bacterial taxa. Next-generation sequencing facilitates the classification of millions of reads of environmental DNA and RNA amplicons and ultrahigh-resolution mass spectrometry yields up to 10 000 DOM molecular formulae in a marine water sample. Linking this detailed biological and chemical information is a crucial first step toward a mechanistic understanding of the role of microorganisms in the marine carbon cycle. In this study, we interpreted the complex microbiological and molecular information via a novel combination of multivariate statistics. We were able to reveal distinct relationships between the key factors of organic matter cycling along a latitudinal transect across the North Sea. Total BC and DOM composition were mainly driven by mixing of distinct water masses and presumably retain their respective terrigenous imprint on similar timescales on their way through the North Sea. The active microbial community, however, was rather influenced by local events and correlated with specific DOM molecular formulae indicative of compounds that are easily degradable. These trends were most pronounced on the highest resolved level, that is, operationally defined 'species', reflecting the functional diversity of microorganisms at high taxonomic resolution. PMID:26800236

  1. Complex spatial organization and flagellin composition of flagellar propeller from marine magnetotactic ovoid strain MO-1.

    PubMed

    Zhang, Wei-Jia; Santini, Claire-Lise; Bernadac, Alain; Ruan, Juanfang; Zhang, Sheng-Da; Kato, Takayuki; Li, Ying; Namba, Keiichi; Wu, Long-Fei

    2012-03-01

    Marine magnetotactic ovoid bacterium MO-1 is capable of swimming along the geomagnetic field lines by means of its two sheathed flagellar bundles at a speed up to 300 μm/s. In this study, by using electron microscopy, we showed that, in each bundle, six individual flagella were organized in hexagon with a seventh in the middle. We identified 12 flagellin paralogs and 2 putative flagellins in the genome of MO-1. Among them, 13 were tandemly located on an ~ 17-kb segment while the 14th was on a separated locus. Using reverse transcription PCR and quantitative PCR, we found that all the 14 flagellin or putative flagellin genes were transcribed and that 2 of them were more abundantly expressed than others. A nLC (nanoliquid chromatography)-ESI (electrospray ionization)-MS/MS (mass spectrometry/mass spectrometry) mass spectrometry analysis identified all the 12 flagellin proteins in three glycosylated polypeptide bands resolved by one-dimensional denaturing polyacrylamide gel electrophoresis and 10 of them in 21 spots obtained by means of two-dimensional electrophoresis of flagellar extracts. Most spots contained more than one flagellin, and eight of the ten identified flagellins existed in multiple isoforms. Taken together, these results show unprecedented complexity in the spatial organization and flagellin composition of the flagellar propeller. Such architecture is observed only for ovoid-coccoid, bilophotrichously flagellated magnetotactic bacteria living in marine sediments, suggesting a species and environmental specificity. PMID:22245577

  2. Baseline monitoring of organic sunscreen compounds along South Carolina's coastal marine environment.

    PubMed

    Bratkovics, Stephanie; Wirth, Edward; Sapozhnikova, Yelena; Pennington, Paul; Sanger, Denise

    2015-12-15

    Organic ultraviolet filters (UV-F) are increasingly being used in personal care products to protect skin and other products from the damaging effects of UV radiation. In this study, marine water was collected monthly for approximately one year from six coastal South Carolina, USA sites and analyzed for the occurrence of seven organic chemicals used as UV filters (avobenzone, dioxybenzone, octocrylene, octinoxate, oxybenzone, padimate-o and sulisobenzone). The results were used to examine the relationship between beach use and the distribution of UV-F compounds along coastal South Carolina, USA. Five of the seven target analytes were detected in seawater along coastal South Carolina during this study. Dioxybenzone and sulisobenzone were not detected. The highest concentrations measured were >3700 ng octocrylene/L and ~2200 ng oxybenzone/L and beach use was greatest at this site; a local beach front park. Patterns in concentrations were assessed based on season and a measure of beach use. PMID:26541983

  3. Organic micropollutants in marine plastics debris from the open ocean and remote and urban beaches.

    PubMed

    Hirai, Hisashi; Takada, Hideshige; Ogata, Yuko; Yamashita, Rei; Mizukawa, Kaoruko; Saha, Mahua; Kwan, Charita; Moore, Charles; Gray, Holly; Laursen, Duane; Zettler, Erik R; Farrington, John W; Reddy, Christopher M; Peacock, Emily E; Ward, Marc W

    2011-08-01

    To understand the spatial variation in concentrations and compositions of organic micropollutants in marine plastic debris and their sources, we analyzed plastic fragments (∼10 mm) from the open ocean and from remote and urban beaches. Polychlorinated biphenyls (PCBs), polycyclic aromatic hydrocarbons (PAHs), dichloro-diphenyl-trichloroethane and its metabolites (DDTs), polybrominated diphenyl ethers (PBDEs), alkylphenols and bisphenol A were detected in the fragments at concentrations from 1 to 10,000 ng/g. Concentrations showed large piece-to-piece variability. Hydrophobic organic compounds such as PCBs and PAHs were sorbed from seawater to the plastic fragments. PCBs are most probably derived from legacy pollution. PAHs showed a petrogenic signature, suggesting the sorption of PAHs from oil slicks. Nonylphenol, bisphenol A, and PBDEs came mainly from additives and were detected at high concentrations in some fragments both from remote and urban beaches and the open ocean. PMID:21719036

  4. The composition of nucleation and Aitken modes particles during coastal nucleation events: evidence for marine secondary organic contribution

    NASA Astrophysics Data System (ADS)

    Vaattovaara, P.; Huttunen, P. E.; Yoon, Y. J.; Joutsensaari, J.; Lehtinen, K. E. J.; O'Dowd, C. D.; Laaksonen, A.

    2006-04-01

    Newly-formed nanometer-sized particles have been observed at coastal and marine environments worldwide. Interestingly, organic species have so far not been detected in those newly-formed nucleation mode particles. In this study, we applied the UFO-TDMA (ultrafine organic tandem differential mobility analyzer) method to study the possible existence of an organic fraction in recently formed coastal nucleation mode particles (d<20 nm) at the Mace Head research station. Furthermore, effects of those nucleation events to potential CCN (cloud condensation nuclei) were studied. The coastal events were typical for the Mace Head region and they occurred at low tide conditions during efficient solar radiation and high biological activity (HBA, i.e. a high mass concentration of chlorophyll a of the ocean) in spring 2002. Additionally, a PHA-UCPC (pulse height analyzer ultrafine condensation particle counter) technique was used to study the composition of newly-formed particles formed in low tide conditions during a lower biological activity (LBA, i.e. a lower mass concentration of chlorophyll a of the ocean) in October 2002. The overall results of the UFO-TDMA and the PHA-UCPC measurements indicate that those coastally/marinely formed nucleation mode particles include a remarkable fraction of secondary organic products, beside iodine oxides, which are likely to be responsible for the nucleation. During clean marine air mass conditions, the origin of those secondary organic oxidation compounds can be related to marine/coastal biota and thus a major fraction of the organics may originate from biosynthetic production of alkenes such as isoprene and their oxidation by iodine, hydroxyl radical, and ozone. During modified marine conditions, also anthropogenic secondary organic compounds may contribute to the nucleation mode organic mass, in addition to biogenic secondary organic compounds. Thus, the UFO-TDMA results suggest that the secondary organic compounds may, in addition to

  5. Glaciers as a source of ancient and labile organic matter to the marine environment.

    PubMed

    Hood, Eran; Fellman, Jason; Spencer, Robert G M; Hernes, Peter J; Edwards, Rick; D'Amore, David; Scott, Durelle

    2009-12-24

    Riverine organic matter supports of the order of one-fifth of estuarine metabolism. Coastal ecosystems are therefore sensitive to alteration of both the quantity and lability of terrigenous dissolved organic matter (DOM) delivered by rivers. The lability of DOM is thought to vary with age, with younger, relatively unaltered organic matter being more easily metabolized by aquatic heterotrophs than older, heavily modified material. This view is developed exclusively from work in watersheds where terrestrial plant and soil sources dominate streamwater DOM. Here we characterize streamwater DOM from 11 coastal watersheds on the Gulf of Alaska that vary widely in glacier coverage (0-64 per cent). In contrast to non-glacial rivers, we find that the bioavailability of DOM to marine microorganisms is significantly correlated with increasing (14)C age. Moreover, the most heavily glaciated watersheds are the source of the oldest ( approximately 4 kyr (14)C age) and most labile (66 per cent bioavailable) DOM. These glacial watersheds have extreme runoff rates, in part because they are subject to some of the highest rates of glacier volume loss on Earth. We estimate the cumulative flux of dissolved organic carbon derived from glaciers contributing runoff to the Gulf of Alaska at 0.13 +/- 0.01 Tg yr(-1) (1 Tg = 10(12) g), of which approximately 0.10 Tg is highly labile. This indicates that glacial runoff is a quantitatively important source of labile reduced carbon to marine ecosystems. Moreover, because glaciers and ice sheets represent the second largest reservoir of water in the global hydrologic system, our findings indicate that climatically driven changes in glacier volume could alter the age, quantity and reactivity of DOM entering coastal oceans. PMID:20033045

  6. Deposition of organic carbon-rich sediments in narrow marine basins and open-marine upwelling environments - New results from the ocean drilling program

    SciTech Connect

    Stein, R. )

    1988-08-01

    Detailed sedimentological and organic geochemical investigations have been performed on Neogene sediments from ODP site 645 (Baffin Bay), ODP site 658 (upwelling area of northwest Africa), and ODP site 679 (upwelling area off Peru). The study is mainly based on (1) data derived from total organic carbon and nitrogen analyses, Rock-Eval pyrolysis, and kerogen microscopy (2) sedimentation rates, and (3) x-ray diffraction analyses. The main objective of this study was to point out the most important factors controlling the accumulation of organic carbon in the different sedimentary environments, such as supply of terrigenous organic matter, productivity of marine organic matter, and preservation of organic matter. These new results from the investigation of ODP sediments are compared with DSDP data from the Mesozoic Atlantic Ocean to characterize the depositional environments of Mesozoic black shales.

  7. 29 CFR 401.10 - Labor organization engaged in an industry affecting commerce.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... commerce. 401.10 Section 401.10 Labor Regulations Relating to Labor OFFICE OF LABOR-MANAGEMENT STANDARDS... organization engaged in an industry affecting commerce. A labor organization shall be deemed to be engaged in an industry affecting commerce if it: (a) Is the certified representative of employees under...

  8. 29 CFR 401.10 - Labor organization engaged in an industry affecting commerce.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... commerce. 401.10 Section 401.10 Labor Regulations Relating to Labor OFFICE OF LABOR-MANAGEMENT STANDARDS... organization engaged in an industry affecting commerce. A labor organization shall be deemed to be engaged in an industry affecting commerce if it: (a) Is the certified representative of employees under...

  9. 29 CFR 401.10 - Labor organization engaged in an industry affecting commerce.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... commerce. 401.10 Section 401.10 Labor Regulations Relating to Labor OFFICE OF LABOR-MANAGEMENT STANDARDS... organization engaged in an industry affecting commerce. A labor organization shall be deemed to be engaged in an industry affecting commerce if it: (a) Is the certified representative of employees under...

  10. 29 CFR 401.10 - Labor organization engaged in an industry affecting commerce.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... commerce. 401.10 Section 401.10 Labor Regulations Relating to Labor OFFICE OF LABOR-MANAGEMENT STANDARDS... organization engaged in an industry affecting commerce. A labor organization shall be deemed to be engaged in an industry affecting commerce if it: (a) Is the certified representative of employees under...

  11. Affective Commitment to the Organization, Supervisor, and Work Group: Antecedents and Outcomes

    ERIC Educational Resources Information Center

    Vandenberghe, Christian; Bentein, Kathleen; Stinglhamber, Florence

    2004-01-01

    Three longitudinal studies investigated the usefulness of distinguishing among employees' affective commitments to the organization, the supervisor, and the work group. Study 1, with 199 employees from various organizations, found that affective commitments to these entities were factorially distinct and related differentially to their theorized…

  12. Affective and Normative Commitment to Organization, Supervisor, and Coworkers: Do Collectivist Values Matter?

    ERIC Educational Resources Information Center

    Wasti, S. Arzu; Can, Ozge

    2008-01-01

    Employees' commitment to their organization is increasingly recognized as comprising of different bases (affect-, obligation-, or cost-based) and different foci (e.g., supervisor, coworkers). Two studies investigated affective and normative commitment to the organization, supervisor and coworkers in the Turkish context. The results of Study 1…

  13. Implications of inorganic/organic interconversion on fluxes of arsenic in marine food webs.

    PubMed Central

    Penrose, W R; Conacher, H B; Black, R; Méranger, J C; Miles, W; Cunningham, H M; Squires, W R

    1977-01-01

    An organic form of arsenic is commonly encountered in marine organisms; in greysole and shrimp, it accounted for all arsenic found in muscle tissue. It has been isolated from flounder tissue by two independent procedures; it was hydrophilic, cationic, and was not decomposed to inorganic arsenic by hot nitric and sulfuric acids. NMR spectroscopy indicated all nonexchangeable protons to be equivalent; they behaved more like N-methyl protons than As-methyl protons. High-resolution mass spectroscopy from a heated probe yielded a spectrum corresponding to tetramethylarsonium (AsMe4+); the authentic ion, however, had TLC and ion-exchange behavior different from that of the natural product. Infrared spectrometry likewise produced conflicting or uninterpretable data. Decomposition of the compound for analytical purposes was accomplished by dry ashing under oxidizing conditions. Sea urchins, like trout, converted arsenic to an organic form, but to a more limited degree. Arsenic found naturally in sea urchins and in a species of macroalga was also organic. In individual containers, sea urchins were fed on the alga for 7 weeks. During this time they consumed 0.203 +/- 0.075 mg total As and excreted only 0.036 +/- 0.015 mg as feces. Measurement of inorganic As in the seawater did not account for the discrepancy, but measurements of total As did (0.202 +/- 0.095 mg). Sea urchins, like humans, appear to be able to rapidly excrete these organic forms of arsenic. PMID:908313

  14. Acupuncture affects regional blood flow in various organs.

    PubMed

    Uchida, Sae; Hotta, Harumi

    2008-06-01

    In this review, our recent studies using anesthetized animals concerning the neural mechanisms of vasodilative effect of acupuncture-like stimulation in various organs are briefly summarized. Responses of cortical cerebral blood flow and uterine blood flow are characterized as non-segmental and segmental reflexes. Among acupuncture-like stimuli delivered to five different segmental areas of the body; afferent inputs to the brain stem (face) and to the spinal cord at the cervical (forepaw), thoracic (chest or abdomen), lumbar (hindpaw) and sacral (perineum) levels, cortical cerebral blood flow was increased by stimuli to face, forepaw and hindpaw. The afferent pathway of the responses is composed of somatic groups III and IV afferent nerves and whose efferent nerve pathway includes intrinsic cholinergic vasodilators originating in the basal forebrain. Uterine blood flow was increased by cutaneous stimulation of the hindpaw and perineal area, with perineal predominance. The afferent pathway of the response is composed of somatic group II, III and IV afferent nerves and the efferent nerve pathway includes the pelvic parasympathetic cholinergic vasodilator nerves. Furthermore, we briefly summarize vasodilative regulation of skeletal muscle blood flow via a calcitonin gene-related peptide (CGRP) induced by antidromic activation of group IV somatic afferent nerves. These findings in healthy but anesthetized animals may be applicable to understanding the neural mechanisms improving blood flow in various organs following clinical acupuncture. PMID:18604254

  15. Climate change affects marine fishes through the oxygen limitation of thermal tolerance.

    PubMed

    Pörtner, Hans O; Knust, Rainer

    2007-01-01

    A cause-and-effect understanding of climate influences on ecosystems requires evaluation of thermal limits of member species and of their ability to cope with changing temperatures. Laboratory data available for marine fish and invertebrates from various climatic regions led to the hypothesis that, as a unifying principle, a mismatch between the demand for oxygen and the capacity of oxygen supply to tissues is the first mechanism to restrict whole-animal tolerance to thermal extremes. We show in the eelpout, Zoarces viviparus, a bioindicator fish species for environmental monitoring from North and Baltic Seas (Helcom), that thermally limited oxygen delivery closely matches environmental temperatures beyond which growth performance and abundance decrease. Decrements in aerobic performance in warming seas will thus be the first process to cause extinction or relocation to cooler waters. PMID:17204649

  16. Conditioned water affects pair formation behaviour in the marine polychaete Neanthes (Nereis) acuminata.

    PubMed

    Storey, Ellen J; Reish, Don J; Hardege, Jörg D

    2013-01-01

    Assessing cues from conspecifics is paramount during mate choice decisions. Neanthes acuminata is a marine polychaete with a unique life cycle: pair formation, female death following reproduction, male parental care and male ability to mate again after egg care. Males completing such egg care are 'experienced'. Females have been shown to prefer experienced males over all others, including aggressively dominant males. As the female dies following reproduction, the reproductive success of her offspring depends upon successful parental care by the male. It is therefore vital that the female makes a good mate choice decision. This paper shows that the use of conditioned water from males caring for eggs and newly experienced males caused the female to alter her choice to a previously undesired male. However, conditioned water from males, which had reproduced but were isolated for 2 weeks, did not have the same effect on pairing behaviour. This indicates that the smell of experience is short lived. PMID:22941305

  17. Underwater Noise from a Wave Energy Converter Is Unlikely to Affect Marine Mammals.

    PubMed

    Tougaard, Jakob

    2015-01-01

    Underwater noise was recorded from the Wavestar wave energy converter; a full-scale hydraulic point absorber, placed on a jack-up rig on the Danish North Sea coast. Noise was recorded 25 m from the converter with an autonomous recording unit (10 Hz to 20 kHz bandwidth). Median sound pressure levels (Leq) in third-octave bands during operation of the converter were 106-109 dB re. 1 μPa in the range 125-250 Hz, 1-2 dB above ambient noise levels (statistically significant). Outside the range 125-250 Hz the noise from the converter was undetectable above the ambient noise. During start and stop of the converter a more powerful tone at 150 Hz (sound pressure level (Leq) 121-125 dB re 1 μPa) was easily detectable. This tone likely originated from the hydraulic pump which was used to lower the absorbers into the water and lift them out of the water at shutdown. Noise levels from the operating wave converter were so low that they would barely be audible to marine mammals and the likelihood of negative impact from the noise appears minimal. A likely explanation for the low noise emissions is the construction of the converter where all moving parts, except for the absorbers themselves, are placed above water on a jack-up rig. The results may thus not be directly transferable to other wave converter designs but do demonstrate that it is possible to harness wave energy without noise pollution to the marine environment. PMID:26148299

  18. Underwater Noise from a Wave Energy Converter Is Unlikely to Affect Marine Mammals

    PubMed Central

    Tougaard, Jakob

    2015-01-01

    Underwater noise was recorded from the Wavestar wave energy converter; a full-scale hydraulic point absorber, placed on a jack-up rig on the Danish North Sea coast. Noise was recorded 25 m from the converter with an autonomous recording unit (10 Hz to 20 kHz bandwidth). Median sound pressure levels (Leq) in third-octave bands during operation of the converter were 106–109 dB re. 1 μPa in the range 125–250 Hz, 1–2 dB above ambient noise levels (statistically significant). Outside the range 125–250 Hz the noise from the converter was undetectable above the ambient noise. During start and stop of the converter a more powerful tone at 150 Hz (sound pressure level (Leq) 121–125 dB re 1 μPa) was easily detectable. This tone likely originated from the hydraulic pump which was used to lower the absorbers into the water and lift them out of the water at shutdown. Noise levels from the operating wave converter were so low that they would barely be audible to marine mammals and the likelihood of negative impact from the noise appears minimal. A likely explanation for the low noise emissions is the construction of the converter where all moving parts, except for the absorbers themselves, are placed above water on a jack-up rig. The results may thus not be directly transferable to other wave converter designs but do demonstrate that it is possible to harness wave energy without noise pollution to the marine environment. PMID:26148299

  19. Neurology of Affective Prosody and Its Functional-Anatomic Organization in Right Hemisphere

    ERIC Educational Resources Information Center

    Ross, Elliott D.; Monnot, Marilee

    2008-01-01

    Unlike the aphasic syndromes, the organization of affective prosody in brain has remained controversial because affective-prosodic deficits may occur after left or right brain damage. However, different patterns of deficits are observed following left and right brain damage that suggest affective prosody is a dominant and lateralized function of…

  20. [Experimental study of vibrio parahaemolyticus (biotype 2) transfer from water and sediments to benthic marine food chain organisms].

    PubMed

    Gauthier, M J; Clement, R

    1979-04-01

    Transfer of Vibrio parahaemolyticus (biotype 2) from sediments to water and from water to benthic marine organisms was studied experimentally using a streptomycin-resistant strain. Transmission by trophic pathways was also studied using reconstituted marine food chains (Mytilus edulis, Nereis diversicolor, Carcinus maenas, Scorpaena porcus, Mus musculus). Water colonization by sediments could be observed only at temperatures above 16 degrees C. Sediments could well constitute a disseminating reservoir for these germs, their cycle in water being dependent of the cycle followed in the sediments. Contamination of animal organisms is essentially effected by a direct mean, either water or sediments; transfer by trophic pathways being negligible. Infection of land consumers (mice) is linked quantitatively to the nature of the last marine organism of the food chain since bacteria can flourish in the digestive tract of certain animals (Carcinus maenas). PMID:487292

  1. Molecular alteration of marine dissolved organic matter under experimental hydrothermal conditions

    NASA Astrophysics Data System (ADS)

    Hawkes, Jeffrey A.; Hansen, Christian T.; Goldhammer, Tobias; Bach, Wolfgang; Dittmar, Thorsten

    2016-02-01

    Marine dissolved organic matter (DOM) is a large (660 Pg) pool of reduced carbon that is subject to thermal alteration in hydrothermal systems and sedimentary basins. In natural high-temperature hydrothermal systems, DOM is almost completely removed, but the mechanism and temperature dependence of this removal have not been studied to date. We investigated molecular-level changes to DOM that was solid-phase extracted (SPE-DOM) from the deep ocean of the North Pacific Ocean. This complex molecular mixture was experimentally exposed to temperatures between 100 and 380 °C over the course of two weeks in artificial seawater, and was then characterised on a molecular level via ultrahigh-resolution Fourier-transform ion cyclotron mass spectrometry (FT-ICR-MS). Almost 93% of SPE-DOM was removed by the treatment at 380 °C, and this removal was accompanied by a consistent pattern of SPE-DOM alteration across the temperatures studied. Higher molecular weight and more oxygen rich compounds were preferentially removed, suggesting that decarboxylation and dehydration of carboxylic acid and alcohol groups are the most rapid degradation mechanisms. Nitrogen containing compounds followed the same overall trends as those containing just C, H and O up to 300 °C. Above this temperature, the most highly altered samples contained very little of the original character of marine DOM, instead being mainly composed of very low intensity N- and S- containing molecules with a high H/C ratio (>1.5). Our results suggest that abiotic hydrothermal alteration of SPE-DOM may already occur at temperatures above 68 °C. Our experiments were conducted without a sedimentary or mineral phase, and demonstrate that profound molecular alteration and almost complete removal of marine SPE-DOM requires nothing more than heating in a seawater matrix.

  2. Production of volatile organic compounds in the culture of marine α-proteobacteria

    NASA Astrophysics Data System (ADS)

    Hirata, M.; Abe, M.; Hashimoto, S.

    2014-12-01

    Volatile organic compounds (VOCs) release halogens in the troposphere and in the stratosphere by photolysis and released halogens catalyze ozone depletion . In the ocean, macroalgae, phytoplankton, and bacteria are considered to be the main producers of VOCs. Recent investigations have shown that marine bacteria produce halomethanes such as chloromethane, bromomethane, and iodomethane. However, knowledge of aquatic VOC production, particularly through bacteria, is lacking. We studied the production of VOCs, including halomethanes, through the bacterium HKF-1. HKF-1 was isolated from brackish water in Sanaru Lake, Shizuoka prefecture, Japan. The bacterium belongs to the α-proteobacteria. Bacteria were incubated in marine broth 2216 (Difco) added with KI and KIO3 (each at 0.02 μmol/L) at 25°C. VOCs in the gas phase above the cultured samples was determined using a dynamic headspace (GESTEL DHS)—gas chromatograph (Agilent 6890N)—mass spectrometer (Agilent 5975C) at 0, 4, 7, 10 and 12 incubation days. In addition, the optical density at 600 nm (OD600) was measured during the culture period. Measurement of VOCs showed that chloromethane, bromomethane, iodomethane, isoprene, methanethiol, dimethyl sulfide, and dimethyl disulfide were produced in the culture of HKF-1. Dihalomethanes and trihalomethanes, such as dibromomethane, chloroiodomethane, bromoiodomethane, and tribromomethane, were not detected. Given that monohalomethanes and sulfur-containing VOCs were abundant in the culture, HKF-1 is one of the possible candidates as a producer of monohalomethane and sulfur-containing VOCs in marine environment, but not of di- or trihalomethanes.

  3. MARINE-EXPRESS: taking advantage of high throughput cloning and expression strategies for the post-genomic analysis of marine organisms

    PubMed Central

    2010-01-01

    Background The production of stable and soluble proteins is one of the most important steps prior to structural and functional studies of biological importance. We investigated the parallel production in a medium throughput strategy of genes coding for proteins from various marine organisms, using protocols that involved recombinatorial cloning, protein expression screening and batch purification. This strategy was applied in order to respond to the need for post-genomic validation of the recent success of a large number of marine genomic projects. Indeed, the upcoming challenge is to go beyond the bioinformatic data, since the bias introduced through the genomes of the so called model organisms leads to numerous proteins of unknown function in the still unexplored world of the oceanic organisms. Results We present here the results of expression tests for 192 targets using a 96-well plate format. Genes were PCR amplified and cloned in parallel into expression vectors pFO4 and pGEX-4T-1, in order to express proteins N-terminally fused to a six-histidine-tag and to a GST-tag, respectively. Small-scale expression and purification permitted isolation of 84 soluble proteins and 34 insoluble proteins, which could also be used in refolding assays. Selected examples of proteins expressed and purified to a larger scale are presented. Conclusions The objective of this program was to get around the bottlenecks of soluble, active protein expression and crystallization for post-genomic validation of a number of proteins that come from various marine organisms. Multiplying the constructions, vectors and targets treated in parallel is important for the success of a medium throughput strategy and considerably increases the chances to get rapid access to pure and soluble protein samples, needed for the subsequent biochemical characterizations. Our set up of a medium throughput strategy applied to genes from marine organisms had a mean success rate of 44% soluble protein expression

  4. Riverine Export of Terrestrial Organic Carbon Investigated by Radiocarbon Dating of Lignin Phenols in River-influenced Marine Core-top Sediments

    NASA Astrophysics Data System (ADS)

    Mollenhauer, G.; Huang, Y.; Kreutz, R.; Kusch, S.; Rethemeyer, J.; Schefuss, E.

    2009-12-01

    -occurring plant-wax lipids like long-chain n-alkanes, n-alcohols, and n-fatty acids. Age differences between the compounds are used to elucidate the effect of different transport mechanisms, particle association, and chemical reactivity as well as potential fossil-fuel derived contamination affecting radiocarbon ages of aliphatic compounds. Ultimately, radiocarbon ages of lignin phenols may be used to estimate the mean residence time of terrestrial organic carbon and the rate of terrestrial carbon export to the marine realm.

  5. Factors affecting survivability of local Rohilkhand goats under organized farm

    PubMed Central

    Upadhyay, D.; Patel, B. H. M.; Sahu, S.; Gaur, G. K.; Singh, M.

    2015-01-01

    Aim: To study the pattern of mortality as affected by age, season and various diseases in local goats of Rohilkhand region maintained at the Indian Veterinary Research Institute, Bareilly. Materials and Methods: Post-mortem records of 12 years (2000-01 to 2011-12) were used, and total 243 mortality data were collected and analyzed. The causes of mortality were classified into seven major classes viz. digestive disorders, respiratory disorders, cardiovascular disorders, musculoskeletal disorder, parasitic disorders, mixed disorders (combination of digestive, respiratory, parasitic, and cardiovascular disorders) and miscellaneous disorders (cold, hypoglycemia, emaciation, endometritis, traumatic injury, etc.). Results: The average mortality was 10.93%. The overall mortality was more during rainy season followed by winter and summer season. The mortality in 4-6 months of age was high (2.52%) followed by 0-1 month (2.34%) and 2-3 months (1.35%). The average mortality among adult age groups (>12 months) was 3.42%. The mortality showed declining trend with the advancement of age up to 3 months and then again increased in 4-6 months age group. The digestive diseases (3.51%) followed by respiratory diseases (1.89%) and parasitic diseases (1.48%) contributed major share to the total mortality occurred and the remaining disorders were of lesser significance in causing death in goats. There is significant (p<0.01; χ2=55.62) association between year with season and age with the season (p<0.05, χ2=16.083) found in the present study. Conclusion: This study confirms that overall mortality rate averaged 10.93% (ranged between 1.10% and 25.56%) over 12 years under semi-intensive farm condition. It was generally higher in rainy season. The mortality remains higher in kids particularly under 1 month of age. The digestive diseases contributed major share to overall mortality. PMID:27047020

  6. Antibacterial and anti-inflammatory finishing of cotton by microencapsulation using three marine organisms.

    PubMed

    El-Rafie, H M; El-Rafie, M H; AbdElsalam, H M; El-Sayed, W A

    2016-05-01

    This work is a small effort in the production of an eco-friendly natural based antibacterial and anti-inflammatory finished cotton fabrics using the ethanolic extracts (Ex) of the sea grass Halophila stipulacea (H. stipulacea) and marine macroalgae [Colbomenia sinuosa (C. sinuosa) and Ulva fasciata (U. fasciata)]. The extracts were phytochemically screened for their constituents. These extracts were used to finish cotton fabrics by a variety of methods. Concerning this, fabrics (F) were singly treated with ethanolic extracts (ExF) of these marine organisms by the dip technique and the extract encapsulated with sodium alginate or meypro gum. The encapsulated fabric (EnF) was further finished individually with citric acid (CA), (EnF/CA) and mono-tert-butyl ether of glycerol (MTBG) binder (EnF/Bin) by the pad-dry-cure technique. The fabrics so-finished were evaluated for their antibacterial and anti-inflammatory activities without washing (control) and after different washing cycles. The results obtained showed that, both EnF/CA and EnF/Bin inhibit the bacterial growth by about 90% after 10 washing cycles for both Escherichia coli (E. coli) and Staphylococcus aureus (S. aureus). The anti-inflammatory activity, the potency% reached to 88.3% for the fabric encapsulated with microcapsules of sodium alginate/H. stipulacea sea grass and the EnF/CA. PMID:26776873

  7. Salmon-Eating Grizzly Bears Exposed to Elevated Levels of Marine Derived Persistent Organic Pollutants

    NASA Astrophysics Data System (ADS)

    Christensen, J. R.; Ross, P. S.; Whiticar, M. J.

    2004-12-01

    The coastal grizzly bears of British Columbia (BC, Canada) rely heavily on salmon returning from the Pacific Ocean, whereas interior bears do not have access to or readily utilize this marine-derived food source. Since salmon have been shown to accumulate persistent organic pollutants (POPs) from the North Pacific Ocean, we hypothesized that salmon consumption by grizzly bears would be reflected by an increase in the POP burden. To test this hypothesis we collected hair and fat tissue from grizzlies at various locations around BC to compare salmon-eating (coastal) grizzlies to non-salmon-eating (interior) grizzlies. We characterized the feeding habits for each bear sampled by measuring the stable carbon and nitrogen isotope signature of their hair. The positive relationship between 13C/12C and 15N/14N isotopic ratios suggests that the majority of the meat portion of the diet of coastal grizzlies is coming from salmon, rather than from terrestrial or freshwater sources. By contrast, stable isotope ratios revealed that interior bears have an almost exclusive vegetarian diet with no marine influence. As hypothesized, the coastal grizzly bears have significantly greater OC pesticide and lower-brominated PBDE congener body burden than the interior grizzlies. We also found a positive relationship between C and N isotope ratios and these same POP contaminants in bear tissue. Overall, these results demonstrate that Pacific salmon represents a significant vector delivering both OC pesticides and PBDEs to BC coastal grizzly bears.

  8. Thermal alteration experiments on organic matter in recent marine sediments as a model for petroleum genesis

    NASA Technical Reports Server (NTRS)

    Baedecker, M. J.; Ikan, R.; Ishiwatari, R.; Kaplan, I. R.

    1977-01-01

    The fate of naturally occurring lipids and pigments in a marine sediment exposed to elevated temperatures was studied. Samples of a young marine sediment from Tanner Basin, California, were heated to a series of temperatures (65-200 C) for varying periods of time (7-64 days). The sediment was analyzed prior to and after heating for pigments, isoprenoid compounds, alcohols, fatty acids, and hydrocarbons. Structural changes caused by heating unextractable organic material (kerogen) were also studied, and the significance of the results for understanding petroleum genesis is considered. Among other results, fatty acids and hydrocarbons increased in abundance although there appeared to be no obvious precursor-to-product relationship via simple decarboxylation reactions. Chlorins were partially converted into porphyrins. The phytyl side chain of pheophytin was initially preserved intact by reduction of the phytyl double bond, but later converted to a variety of isoprenoid compounds including alkanes. Thermal grafting of components onto kerogen occurred as well as structural changes caused by heat.

  9. Iodine oxide in the global marine boundary layer: inorganic versus organic sources

    NASA Astrophysics Data System (ADS)

    Prados-Roman, Cristina; Cuevas, Carlos; Mahajan, Anoop; Fernandez, Rafael; Saiz-Lopez, Alfonso

    2014-05-01

    In the last decades iodine has been object of increasing interest in atmospheric chemistry due to its link to the oxidizing capacity of the atmosphere, the NOx and HOx partitioning and the formation of ultra-fine particles. Recently laboratory and numerous fieldwork efforts have been carried out trying to assess the sources and sinks of reactive iodine in the open marine environment. Within the framework of the Malaspina expedition, in 2010-2011 the Spanish research vessel Hesperides circumnavigated the world aiming at investigating the biogeochemistry, physical oceanography and microbiological biodiversity of the oceans from a multidisciplinary approach. During that 7-months campaign throughout the Atlantic, Indian and Pacific oceans, a MAX-DOAS system was deployed, along with a surface ozone instrument, in order to monitor the geographical distribution of relevant reactive iodine compounds such IO. Complementing this extensive dataset with results from previous works in the Eastern Pacific Ocean, we show not only the ubiquity of iodine oxide in the open marine boundary layer (MBL) ranging between 0.3-1 pptv levels, but also provide what is- to our knowledge- the most comprehensive global map of the of IO and O3 distribution in the subpolar MBL. Ultimately, by means of a photochemical model, we will address the contribution of inorganic and organic iodine sources to the measured levels of IO.

  10. Approaches to the choice of the test organisms for bioassay of the marine environment

    SciTech Connect

    Khristoforova, N.K.; Tyurin, A.N. |

    1995-12-31

    Regarding test organisms for assessment of water quality the present-day toxicologists usually give their preference to such practically important characteristics of species as easiness of laboratory cultivation, small number of endpoints measured and short duration of tests. The most often used indicators of the marine environment toxicity are: eggs, embryos, and larvae of invertebrates. This approach is based on a higher sensitivity of initial ontogenetic stages and is focused on abnormalities of fertilization and/or development. Taking different endpoints (appearance of fertilization membrane, gastrula, pluteus I, prodissoconch I, e.o.) as convenient guides gives species unequal opportunities for showing potential sensitivity because only initial stages (embryonal or larval) are used in practice. Moreover, neither case reaches the most critical final stage, namely the metamorphosis and settlement. It is quite possible that the proposed test on chitons, (Lepidozona albrechti and Ischnochiton hakadensis) can be considered as the most sensitive among the currently known marine bioassays because both species reach the juvenile stage in 4 days. The results show that MPC`s for fishery water bodies estimated by this test are 5 times less then the MPC`s for Cu, 10 times less for Cd and 50 times less for Zn and detergents.

  11. Latitudinal distribution of persistent organic pollutants in pelagic and demersal marine fish on the Norwegian Coast.

    PubMed

    Bustnes, Jan Ove; Borgå, Katrine; Dempster, Tim; Lie, Elisabeth; Nygård, Torgeir; Uglem, Ingebrigt

    2012-07-17

    The latitudinal distribution of persistent organic pollutants (POPs: legacy organochlorines [OCs], polybrominated diphenyl ethers [PBDEs,] and hexabromocyclododecane [HBCD]) was examined in livers of two species of marine fish, the pelagic saithe (Pollachius virens,n = 40) and the demersal cod (Gadus morhua,n = 40), along a south-north gradient (59°-70°N) on the Norwegian Coast. Cod had in general two to three times higher concentrations of POPs than saithe, probably because of higher exposure in the benthic food chain. The concentrations of heavy halogenated compounds were higher in the southernmost region than further north. Moreover, the POP pattern showed a gradual shift in the compositions from south to north, especially for OCs in cod: i.e. the relative importance of low-chlorinated polychlorinated biphenyl (PCB) congeners and some OC-pesticides (e.g., hexachlorobenzen [HCB]) in the contaminant burdens increased with latitude. The latitudinal fractionation signal was weaker in saithe, possibly due to its pelagic and nomadic behavior. Hence, this study shows not only a strong latitudinal fractionation in the compositional patterns of POPs in marine fish but also the effects of habitat use and fish behavior. PMID:22734881

  12. Zinc Affects Differently Growth, Photosynthesis, Antioxidant Enzyme Activities and Phytochelatin Synthase Expression of Four Marine Diatoms

    PubMed Central

    Nguyen-Deroche, Thi Le Nhung; Caruso, Aurore; Le, Thi Trung; Bui, Trang Viet; Schoefs, Benoît; Tremblin, Gérard; Morant-Manceau, Annick

    2012-01-01

    Zinc-supplementation (20 μM) effects on growth, photosynthesis, antioxidant enzyme activities (superoxide dismutase, ascorbate peroxidase, catalase), and the expression of phytochelatin synthase gene were investigated in four marine diatoms (Amphora acutiuscula, Nitzschia palea, Amphora coffeaeformis and Entomoneis paludosa). Zn-supplementation reduced the maximum cell density. A linear relationship was found between the evolution of gross photosynthesis and total chlorophyll content. The Zn treatment decreased the electron transport rate except in A. coffeaeformis and in E. paludosa at high irradiance. A linear relationship was found between the efficiency of light to evolve oxygen and the size of the light-harvesting antenna. The external carbonic anhydrase activity was stimulated in Zn-supplemented E. paludosa but was not correlated with an increase of photosynthesis. The total activity of the antioxidant enzymes did not display any clear increase except in ascorbate peroxidase activity in N. palea. The phytochelatin synthase gene was identified in the four diatoms, but its expression was only revealed in N. palea, without a clear difference between control and Zn-supplemented cells. Among the four species, A. paludosa was the most sensitive and A. coffeaeformis, the most tolerant. A. acutiuscula seemed to be under metal starvation, whereas, to survive, only N. palea developed several stress responses. PMID:22645501

  13. The effect of temperature on organic carbon degradation in marine sediments

    NASA Astrophysics Data System (ADS)

    Malinverno, Alberto; Martinez, Ernesto A.

    2015-12-01

    The degradation of sedimentary particulate organic carbon (POC) is a key carbon cycle process that fuels the deep subseafloor biosphere. The reactivity of POC is expected to decrease with increasing sediment age, severely restricting the energy available to microorganisms. Conversely, increasing temperatures during burial have been proposed to stimulate POC degradation, possibly supplying significant energy to the deep biosphere. To test the importance of temperature, we assembled POC measurements in two global sets of drill sites where sediments underwent either relatively low or high temperatures during burial, which should have resulted in different rates of POC degradation. For ages 5-10 Ma, the decrease of the average POC content with burial is clearly more pronounced in the sites with high temperature histories. Our results support the hypothesis that temperature is one of the fundamental controls on the rate of POC degradation within deeply buried marine sediments.

  14. An overview of time trends in organic contaminant concentrations in marine mammals: going up or down?

    PubMed

    Law, Robin J

    2014-05-15

    In this article I review recent trends reported in the literature from 2008 to date for organic contaminant concentrations in marine mammal tissues worldwide, in order to get an idea of where we stand currently in relation to the control of hazardous substances. For many contaminants which have been subject to regulation regarding their production and use (e.g. organochlorine pesticides, PBDE and HBCD flame retardants, butyltins) trends are downwards. For perfluorinated compounds, trends are more mixed. For dioxins, furans and dioxin-like CBs, there are no recent data, for either concentrations or trends. For CBs overall, earlier downward trends in concentration in UK harbour porpoises following regulation beginning in the 1980s have stalled, and remain at toxicologically significant levels. This raises concerns for killer whales and bottlenose dolphins who, because of their larger size and greater bioaccumulation potential, have higher levels still, often far above accepted toxicological threshold values. PMID:24703807

  15. The effect of temperature on organic carbon degradation in marine sediments

    PubMed Central

    Malinverno, Alberto; Martinez, Ernesto A.

    2015-01-01

    The degradation of sedimentary particulate organic carbon (POC) is a key carbon cycle process that fuels the deep subseafloor biosphere. The reactivity of POC is expected to decrease with increasing sediment age, severely restricting the energy available to microorganisms. Conversely, increasing temperatures during burial have been proposed to stimulate POC degradation, possibly supplying significant energy to the deep biosphere. To test the importance of temperature, we assembled POC measurements in two global sets of drill sites where sediments underwent either relatively low or high temperatures during burial, which should have resulted in different rates of POC degradation. For ages 5–10 Ma, the decrease of the average POC content with burial is clearly more pronounced in the sites with high temperature histories. Our results support the hypothesis that temperature is one of the fundamental controls on the rate of POC degradation within deeply buried marine sediments. PMID:26640172

  16. The Impact of Organic Surfactants and Coatings in Regulating Heterogeneous N2O5 Reaction Kinetics on Nascent Marine Aerosol

    NASA Astrophysics Data System (ADS)

    Ryder, O. S.; Campbell, N.; Schill, S.; Pöhlker, C.; Andreae, M. O.; Bertram, T. H.

    2013-12-01

    The heterogeneous reaction of N2O5 on aerosol particles impacts both the lifetime of nitrogen oxides, and the production rate of chlorine radicals following the activation of particulate chloride to nitryl chloride in both coastal and continental regions. The extent to which N2O5 reactivity impacts oxidant loadings depends on the heterogeneous reaction rate, which is directly influenced by aerosol chemical composition, morphology, and physical phase state. In the marine environment, the chemical composition of aerosol particles produced via wave induced bubble bursting mechanisms varies greatly and is influenced by the composition of the sea surface microlayer . Here, we present direct measurements of N2O5 reaction kinetics determined using model sea-spray particles generated in a novel Marine Aerosol Reference Tank (MART), capable of generating accurate mimics of ambient sea spray particles, in a lab environment. Here, a synthetic sea salt ocean was sequentially doped with organic molecules chosen to mimic organic species present in natural sea water over the course of a phytoplankton bloom in the open ocean. These included sterol, galactose, lippolysaccharide, BSA protein, and 1,2-dipalmitoyl-sn-glycero-3-phosphate (DPPA). These observations permit discussion of the role of marine organics in regulating heterogeneous reaction kinetics, as well a re-evaluation of potential organic lab proxies for marine organics.

  17. Interactions between volatile organic compounds and reactive halogen in the tropical marine atmosphere using WRF-Chem

    NASA Astrophysics Data System (ADS)

    Badia, Alba; Reeves, Claire E.; Baker, Alex; Volkamer, Rainer; von Glasow, Roland

    2016-04-01

    Halogen species (chlorine, bromine and iodine) are known to play an important role in the chemistry and oxidizing capacity of the troposphere, particularly in the marine boundary layer (MBL). Reactive halogens cause ozone (O3) destruction, change the HOx and NOX partitioning, affect the oxidation of volatile organic compounds (VOCs) and mercury, reduce the lifetime of methane, and take part in new particle formation. Numerical models predicted that reactive halogen compounds account for 30% of O3 destruction in the MBL and 5-20% globally. There are indications that the chemistry of reactive halogens and oxygenated VOCs (OVOCs) in the tropics are inter-related. Moreover, the presence of aldehydes, such as glyoxal (CHOCHO), has a potential impact on radical cycling and secondary organic aerosol (SOA) formation in the MBL and free troposphere (FT). Model calculations suggest aldehydes to be an important sink for bromine atoms and hence competition for their reaction with O3 forming BrO and so illustrating a link between the cycles of halogens and OVOCs in the marine atmosphere. The main objective of this contribution is to investigate the atmospheric chemistry in the tropical East Pacific with a focus on reactive halogens and OVOCs and their links using the latest version of the Weather Research and Forecasting (WRF) model coupled with Chemistry (WRF-Chem) and field data from the TORERO campaign. WRF-Chem is a highly flexible community model for atmospheric research where aerosol-radiation-cloud feedback processes are taken into account. Our current reaction mechanism in WRF-Chem is based on the MOZART mechanism and has been extended to include bromine, chlorine and iodine chemistry. The MOZART mechanism includes detailed gas-phase chemistry of CHOCHO formation as well as state-of-the-science pathways to form SOA. Oceanic emissions of aldehydes, including CHOCHO, and of organic halogens based on measurements from the TORERO campaign have been added into the model. Sea

  18. Mixed populations of marine microalgae in continuous culture: Factors affecting species dominance and biomass productivity.

    PubMed

    Regan, D L; Ivancic, N

    1984-11-01

    Marine microalgae were grown in multispecies continuous cultures. Under carbon dioxide limitation, blue-green algae dominated. Under nitrate and light limitation, species dominance depended on the initial conditions. When the inoculum consisted primarily of blue-green algae with smaller amounts of other species, blue-green algae and pennate diatoms dominated. When the inoculum consisted of equal amounts of all species, green flagellates and pennate diatoms dominated. Green flagellates and blue-green algae were incompatible and never shared dominance. When nutrient limitations were overcome, the productivity of seawater was increased 100-fold before light limitation occurred. The productivity could be further increased by reducing photorespiration in the culture. The dilution rates studied (0.1, 0.2, and 0.4 day(-1)) had no effect on species dominance, nor did the higher dilution rates select for smaller cells. The maximum productivity occurred at a dilution rate of 0.2 day(-1). Temperature had the greatest effect on species dominance, with green flagellates, pennate diatoms, and blue-green algae dominating at 20 degrees C and only blue-green algae dominating at 35 degrees C. The productivity at 35 degrees C was lower than that at 20 degrees C because of the lower solubility of carbon dioxide at higher temperatures. At 10% salinity, green flagellates and pennate diatoms dominated. The productivity at this salinity was 50% that obtained at the salinity of seawater (3.5%). At 25% salinity, only the green flagellate, Dunaliella salina, survived at a productivity of 1% that obtained at the salinity of seawater. PMID:18551649

  19. Global distribution and surface activity of macromolecules in offline simulations of marine organic chemistry

    DOE PAGESBeta

    Ogunro, Oluwaseun O.; Burrows, Susannah M.; Elliott, Scott; Frossard, Amanda A.; Hoffman, Forrest M.; Letscher, Robert T.; Moore, J. Keith; Russell, Lynn M.; Wang, Shanlin; Wingenter, Oliver W.

    2015-10-13

    Here, organic macromolecules constitute high percentage components of remote sea spray. They enter the atmosphere through adsorption onto bubbles followed by bursting at the ocean surface, and go on to influence the chemistry of the fine mode aerosol. We present a global estimate of mixed-layer organic macromolecular distributions, driven by offline marine systems model output. The approach permits estimation of oceanic concentrations and bubble film surface coverages for several classes of organic compound. Mixed layer levels are computed from the output of a global ocean biogeochemistry model by relating the macromolecules to standard biogeochemical tracers. Steady state is assumed formore » labile forms, and for longer-lived components we rely on ratios to existing transported variables. Adsorption is then represented through conventional Langmuir isotherms, with equilibria deduced from laboratory analogs. Open water concentrations locally exceed one micromolar carbon for the total of protein, polysaccharide and refractory heteropolycondensate. The shorter-lived lipids remain confined to regions of strong biological activity. Results are evaluated against available measurements for all compound types, and agreement is generally quite reasonable. Global distributions are further estimated for both fractional coverage of bubble films at the air-water interface and the two-dimensional concentration excess. Overall, we show that macromolecular mapping provides a novel tool for the comprehension of oceanic surfactant distributions. Results may prove useful in planning field experiments and assessing the potential response of surface chemical behaviors to global change.« less

  20. Global distribution and surface activity of macromolecules in offline simulations of marine organic chemistry

    SciTech Connect

    Ogunro, Oluwaseun O.; Burrows, Susannah M.; Elliott, Scott; Frossard, Amanda A.; Hoffman, Forrest M.; Letscher, Robert T.; Moore, J. Keith; Russell, Lynn M.; Wang, Shanlin; Wingenter, Oliver W.

    2015-10-13

    Here, organic macromolecules constitute high percentage components of remote sea spray. They enter the atmosphere through adsorption onto bubbles followed by bursting at the ocean surface, and go on to influence the chemistry of the fine mode aerosol. We present a global estimate of mixed-layer organic macromolecular distributions, driven by offline marine systems model output. The approach permits estimation of oceanic concentrations and bubble film surface coverages for several classes of organic compound. Mixed layer levels are computed from the output of a global ocean biogeochemistry model by relating the macromolecules to standard biogeochemical tracers. Steady state is assumed for labile forms, and for longer-lived components we rely on ratios to existing transported variables. Adsorption is then represented through conventional Langmuir isotherms, with equilibria deduced from laboratory analogs. Open water concentrations locally exceed one micromolar carbon for the total of protein, polysaccharide and refractory heteropolycondensate. The shorter-lived lipids remain confined to regions of strong biological activity. Results are evaluated against available measurements for all compound types, and agreement is generally quite reasonable. Global distributions are further estimated for both fractional coverage of bubble films at the air-water interface and the two-dimensional concentration excess. Overall, we show that macromolecular mapping provides a novel tool for the comprehension of oceanic surfactant distributions. Results may prove useful in planning field experiments and assessing the potential response of surface chemical behaviors to global change.

  1. Investigations into methods of removing from marine sediments that toxicity attributable to organic contaminants

    SciTech Connect

    Huckins, J.N.; Lebo, J.A.; Petty, J.D.; Orazio, C.E.; Gibson, V.L.; Ho, K.

    1995-12-31

    Sediments from contaminated estuaries such as New York/New Jersey Harbor are toxic due to the presence of a diversity of contaminants, e.g., heavy metals, ammonia, and organics such as PCBs, PAHs, PCDDs and PCDFs. To facilitate Toxicity Identification Evaluation (TIE) studies of whole sediments, the authors have developed a strategy for selectively reducing or removing organic contaminant residues with minimal disruption of the dynamics of other classes of contaminants that contribute to whole sediment toxicity. The strategy consists of an optional prewash of the sediment slurry with a nonpolar volatile solvent to remove globular and crystalline contaminant phases, turbation of sediment slurry (elevated temperature may be required) in the presence of polyethylene strips (PE) or charcoal-impregnated PE strips and triolein-containing semipermeable membrane devices (SPMDs), and finally addition of small amounts of fine-grained activated carbon (shown to be nontoxic) to the test sediment. Replicate (n = 2) samples of a marine sediment spiked and aged with 500 {micro}g/g dieldrin were successfully detoxified using these procedures, as 48 h bioassays (Mysidopsis bahia and Ampelisca abdita) showed no toxicity, while untreated sediment and SPMD dialysates were toxic. Gas chromatographic analysis of the treated sediment samples showed that 97 and > 99 percent of the dieldrin had been removed. Detoxification of other sediments with naturally incurred high-K{sub oc} organic pollutants may be more problematic.

  2. Geochemical and climatic effects of increased marine organic carbon burial at the Cenomanian/Turonian boundary

    USGS Publications Warehouse

    Arthur, M.A.; Dean, W.E.; Pratt, L.M.

    1988-01-01

    Perhaps the most significant event in the Cretaceous record of the carbon isotope composition of carbonate1,2, other than the 1-2.5??? negative shift in the carbon isotope composition of calcareous plankton at the Cretaceous/Tertiary boundary3, is the rapid global positive excursion of ???2??? (13C enrichment) which took place between ???91.5 Myr and 90.3 Myr (late Cenomanian to earliest Turonian (C/T boundary event))1,4,5. This excursion has been attributed to a change in the isotope composition of the marine total dissolved carbon (TDC) reservoir resulting from an increase in rate of burial of 13C-depleted organic carbon, which coincided with a major global rise in sea level5 during the so-called C/T oceanic anoxic event (OAE)6. Here we present new data, from nine localities, which demonstrate that a positive excursion in the carbon isotope composition of organic carbon at or near the C/T boundary7,8 is nearly synchronous with that for carbonate and is widespread throughout the Tethys and Atlantic basins (Fig. 1), as well as in more high-latitude epicontinental seas. The postulated increase in the rate of burial of organic carbon may have had a significant effect on CO2 and O2 concentrations in the oceans and atmosphere, and consequent effects on global climate and sedimentary facies. ?? 1988 Nature Publishing Group.

  3. Co-evolution of proteins and solutions: protein adaptation versus cytoprotective micromolecules and their roles in marine organisms.

    PubMed

    Yancey, Paul H; Siebenaller, Joseph F

    2015-06-01

    Organisms experience a wide range of environmental factors such as temperature, salinity and hydrostatic pressure, which pose challenges to biochemical processes. Studies on adaptations to such factors have largely focused on macromolecules, especially intrinsic adaptations in protein structure and function. However, micromolecular cosolutes can act as cytoprotectants in the cellular milieu to affect biochemical function and they are now recognized as important extrinsic adaptations. These solutes, both inorganic and organic, have been best characterized as osmolytes, which accumulate to reduce osmotic water loss. Singly, and in combination, many cosolutes have properties beyond simple osmotic effects, e.g. altering the stability and function of proteins in the face of numerous stressors. A key example is the marine osmolyte trimethylamine oxide (TMAO), which appears to enhance water structure and is excluded from peptide backbones, favoring protein folding and stability and counteracting destabilizers like urea and temperature. Co-evolution of intrinsic and extrinsic adaptations is illustrated with high hydrostatic pressure in deep-living organisms. Cytosolic and membrane proteins and G-protein-coupled signal transduction in fishes under pressure show inhibited function and stability, while revealing a number of intrinsic adaptations in deep species. Yet, intrinsic adaptations are often incomplete, and those fishes accumulate TMAO linearly with depth, suggesting a role for TMAO as an extrinsic 'piezolyte' or pressure cosolute. Indeed, TMAO is able to counteract the inhibitory effects of pressure on the stability and function of many proteins. Other cosolutes are cytoprotective in other ways, such as via antioxidation. Such observations highlight the importance of considering the cellular milieu in biochemical and cellular adaptation. PMID:26085665

  4. Molecular insights into the microbial formation of marine dissolved organic matter: recalcitrant or labile?

    NASA Astrophysics Data System (ADS)

    Koch, B. P.; Kattner, G.; Witt, M.; Passow, U.

    2014-08-01

    The degradation of marine dissolved organic matter (DOM) is an important control variable in the global carbon cycle. For our understanding of the kinetics of organic matter cycling in the ocean, it is crucial to achieve a mechanistic and molecular understanding of its transformation processes. A long-term microbial experiment was performed to follow the production of non-labile DOM by marine bacteria. Two different glucose concentrations and dissolved algal exudates were used as substrates. We monitored the bacterial abundance, concentrations of dissolved and particulate organic carbon (DOC, POC), nutrients, amino acids and transparent exopolymer particles (TEP) for 2 years. The molecular characterization of extracted DOM was performed by ultrahigh resolution Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) after 70 days and after ∼2 years of incubation. Although glucose quickly degraded, a non-labile DOC background (5-9% of the initial DOC) was generated in the glucose incubations. Only 20% of the organic carbon from the algal exudate degraded within the 2 years of incubation. The degradation rates for the non-labile DOC background in the different treatments varied between 1 and 11 μmol DOC L-1 year-1. Transparent exopolymer particles, which are released by microorganisms, were produced during glucose degradation but decreased back to half of the maximum concentration within less than 3 weeks (degradation rate: 25 μg xanthan gum equivalents L-1 d-1) and were below detection in all treatments after 2 years. Additional glucose was added after 2 years to test whether labile substrate can promote the degradation of background DOC (co-metabolism; priming effect). A priming effect was not observed but the glucose addition led to a slight increase of background DOC. The molecular analysis demonstrated that DOM generated during glucose degradation differed appreciably from DOM transformed during the degradation of the algal exudates. Our

  5. The impact of debris on marine life.

    PubMed

    Gall, S C; Thompson, R C

    2015-03-15

    Marine debris is listed among the major perceived threats to biodiversity, and is cause for particular concern due to its abundance, durability and persistence in the marine environment. An extensive literature search reviewed the current state of knowledge on the effects of marine debris on marine organisms. 340 original publications reported encounters between organisms and marine debris and 693 species. Plastic debris accounted for 92% of encounters between debris and individuals. Numerous direct and indirect consequences were recorded, with the potential for sublethal effects of ingestion an area of considerable uncertainty and concern. Comparison to the IUCN Red List highlighted that at least 17% of species affected by entanglement and ingestion were listed as threatened or near threatened. Hence where marine debris combines with other anthropogenic stressors it may affect populations, trophic interactions and assemblages. PMID:25680883

  6. Sorption and competition of two persistent organic pesticides onto marine sediments: Relevance to their distribution in aquatic system.

    PubMed

    Soubaneh, Youssouf Djibril; Gagné, Jean-Pierre; Lebeuf, Michel; Nikiforov, Vladimir; Gouteux, Bruno; Osman, Awaleh Mohamed

    2015-07-01

    Sorption is a key process in the distribution of substances between environmental compartments in marine ecosystems. Two persistent organic pesticides, also known as toxaphene congeners, namely B8-1413 (P26) and B9-1679 (P50), are of special interest because they are not detected in sediments while relatively concentrated in marine mammals. Sorption-desorption, entrapment and competition behaviors of these pesticides onto marine sediments were studied to explain their environmental distribution. Data obtained under marine experimental conditions were fitted to sorption models to evaluate sorption coefficients and to assess the degree of B8-1413/B9-1679 entrapment of the two toxaphene congeners in sediments. Carbon normalized sorption coefficients (Koc) of both congeners were similar under in cold (2°C) marine (30 psu) conditions with high values ranging from 1.53×10(5) to 3.28×10(5) mL g(-1)indicative of a strong affinity to marine sediments However, the sorption-desorption investigations indicate that B8-1413/B9-1679 were on average 2.5 times less entrapped in sediments compared to B7-1450, a toxaphene congener known to accumulate predominantly in sediments. These results suggest that the low entrapment of B8-1413 and B9-1679 favor their availability and transfer to biological matrices. PMID:25765263

  7. Bioaccumulation and Toxicity of Single-Walled Carbon Nanotubes to Benthic Organisms at the Base of the Marine Food Chain

    EPA Science Inventory

    As the use of single-walled carbon nanotubes (SWNTs) increases over time, so does the potential for environmental release. This research aimed to determine the toxicity, bioavailability, and bioaccumulation of SWNTs in marine benthic organisms at the base of the food chain. The t...

  8. Organic molecular composition of marine aerosols over the Arctic Ocean in summer: contributions of primary emission and secondary aerosol formation

    NASA Astrophysics Data System (ADS)

    Fu, P. Q.; Kawamura, K.; Chen, J.; Charrière, B.; Sempéré, R.

    2013-02-01

    Organic molecular composition of marine aerosol samples collected during the MALINA cruise in the Arctic Ocean was investigated by gas chromatography/mass spectrometry. More than 110 individual organic compounds were determined in the samples and were grouped into different compound classes based on the functionality and sources. The concentrations of total quantified organics ranged from 7.3 to 185 ng m-3 (mean 47.6 ng m-3), accounting for 1.8-11.0% (4.8%) of organic carbon in the marine aerosols. Primary saccharides were found to be dominant organic compound class, followed by secondary organic aerosol (SOA) tracers formed from the oxidation of biogenic volatile organic compounds (VOCs) such as isoprene, α-pinene and β-caryophyllene. Mannitol, the specific tracer for airborne fungal spores, was detected as the most abundant organic species in the samples with a concentration range of 0.052-53.3 ng m-3 (9.2 ng m-3), followed by glucose, arabitol, and the isoprene oxidation products of 2-methyltetrols. Biomass burning tracers such as levoglucosan are evident in all samples with trace levels. On the basis of the tracer-based method for the estimation of fungal-spore OC and biogenic secondary organic carbon (SOC), we estimate that an average of 10.7% (up to 26.2%) of the OC in the marine aerosols was due to the contribution of fungal spores, followed by the contribution of isoprene SOC (mean 3.8%) and α-pinene SOC (2.9%). In contrast, only 0.19% of the OC was due to the photooxidation of β-caryophyllene. This study indicates that primary organic aerosols from biogenic emissions, both from long-range transport of mid-latitude aerosols and from sea-to-air emission of marine organics, as well as secondary organic aerosols formed from the photooxidation of biogenic VOCs are important factors controlling the organic chemical composition of marine aerosols in the Arctic Ocean.

  9. Organic molecular composition of marine aerosols over the Arctic Ocean in summer: contributions of primary emission and secondary aerosol formation

    NASA Astrophysics Data System (ADS)

    Fu, P. Q.; Kawamura, K.; Chen, J.; Charrière, B.; Sempéré, R.

    2012-08-01

    Organic molecular composition of marine aerosol samples collected during the MALINA cruise in the Arctic Ocean was investigated by gas chromatography/mass spectrometry. More than 110 individual organic compounds were determined in the samples and were grouped into different compound classes based on the functionality and sources. The concentrations of total quantified organics ranged from 7.3 to 185 ng m-3 (mean 47.6 ng m-3), accounting for 1.8-11.0% (4.8%) of organic carbon in the marine aerosols. Primary saccharides were found to be dominant organic compound class, followed by secondary organic aerosol (SOA) tracers formed from the oxidation of biogenic volatile organic compounds (VOCs) such as isoprene, α-pinene and β-caryophyllene. Mannitol, the specific tracer for airborne fungal spores, was detected as the most abundant organic species in the samples with a concentration range of 0.052-53.3 ng m-3 (9.2 ng m-3), followed by glucose, arabitol, and the isoprene oxidation products of 2-methyltetrols. Biomass burning tracers such as levoglucosan are evident in all samples with trace levels. On the basis of the tracer-based method for the estimation of fungal-spore OC and biogenic secondary organic carbon (SOC), we estimate that an average of 10.7% (up to 26.2%) of the OC in the marine aerosols was due to the contribution of fungal spores, followed by the contribution of isoprene SOC (mean 3.8%) and α-pinene SOC (2.9%). In contrast, only 0.19% of the OC was due to the photooxidation of β-caryophyllene. This study indicates that primary organic aerosols from biogenic emissions, both from long-range transport of mid-latitude aerosols and from sea-to-air emission of marine organics, as well as secondary organic aerosols formed from the photooxidation of biogenic VOCs are important factors controlling the organic chemical composition of marine aerosols in the Arctic Ocean.

  10. Variation in bioaccumulation of persistent organic pollutants based on octanol-air partitioning: Influence of respiratory elimination in marine species.

    PubMed

    Moses, Sara K; Harley, John R; Lieske, Camilla L; Muir, Derek C G; Whiting, Alex V; O'Hara, Todd M

    2015-11-15

    Risk assessments of persistent organic pollutants (POPs) are often based on octanol-water (KOW) partitioning dynamics and may not adequately reflect bioaccumulation in air-breathing organisms. It has been suggested that compounds with low KOW and high octanol-air partitioning (KOA) coefficients have the potential to bioaccumulate in air-breathing organisms, including marine mammals. Here we evaluate differences in concentrations of POPs for two trophically matched Arctic species, spotted seal (Phoca largha) and sheefish (Stenodus leucichthys). We compared concentrations of 108 POPs in matched tissues (liver and muscle) across three ranges of KOW. We found a significant positive correlation between POP concentration and log KOA in spotted seal tissues for low log KOW compounds (log KOW <5.5, p<0.05). This provides further evidence for empirical models and observed bioaccumulation patterns in air-breathing organisms, and highlights the potential for bioaccumulation of these compounds in Arctic marine mammals. PMID:26440545

  11. Transfer of organic carbon through marine water columns to sediments - insights from stable and radiocarbon isotopes of lipid biomarkers

    NASA Astrophysics Data System (ADS)

    Wakeham, S. G.; McNichol, A. P.

    2014-12-01

    Compound-specific 13C and 14C compositions of diverse lipid biomarkers (fatty acids, alkenones, hydrocarbons, sterols and fatty alcohols) were measured in sinking particulate matter collected in sediment traps and from underlying surface sediments in the Black Sea, the Arabian Sea and the Ross Sea. The goal was to develop a multiparameter approach to constrain relative inputs of organic carbon (OC) from marine biomass, terrigenous vascular-plant and relict-kerogen sources. Using an isotope mass balance, we calculate that marine biomass in sediment trap material from the Black Sea and Arabian Sea accounted for 66-100% of OC, with lower terrigenous (3-8%) and relict (4-16%) contributions. Marine biomass in sediments constituted lower proportions of OC (66-90%), with consequentially higher proportions of terrigenous and relict carbon (3-17 and 7-13%, respectively). Ross Sea data were insufficient to allow similar mass balance calculations. These results suggest that, whereas particulate organic carbon is overwhelmingly marine in origin, pre-aged allochthonous terrigenous and relict OC become proportionally more important in sediments, consistent with pre-aged OC being better preserved during vertical transport to and burial at the seafloor than the upper-ocean-derived marine OC.

  12. Molecular formulae of marine and terrigenous dissolved organic matter detected by electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry

    NASA Astrophysics Data System (ADS)

    Koch, Boris P.; Witt, Matthias; Engbrodt, Ralph; Dittmar, Thorsten; Kattner, Gerhard

    2005-07-01

    The chemical structure of refractory marine dissolved organic matter (DOM) is still largely unknown. Electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry (ESI FT-ICR-MS) was used to resolve the complex mixtures of DOM and provide valuable information on elemental compositions on a molecular scale. We characterized and compared DOM from two sharply contrasting aquatic environments, algal-derived DOM from the Weddell Sea (Antarctica) and terrigenous DOM from pore water of a tropical mangrove area in northern Brazil. Several thousand molecular formulas in the mass range of 300-600 Da were identified and reproduced in element ratio plots. On the basis of molecular elemental composition and double-bond equivalents (DBE) we calculated an average composition for marine DOM. O/C ratios in the marine samples were lower (0.36 ± 0.01) than in the mangrove pore-water sample (0.42). A small proportion of chemical formulas with higher molecular mass in the marine samples were characterized by very low O/C and H/C ratios probably reflecting amphiphilic properties. The average number of unsaturations in the marine samples was surprisingly high (DBE = 9.9; mangrove pore water: DBE = 9.4) most likely due to a significant contribution of carbonyl carbon. There was no significant difference in elemental composition between surface and deep-water DOM in the Weddell Sea. Although there were some molecules with unique marine elemental composition, there was a conspicuous degree of similarity between the terrigenous and algal-derived end members. Approximately one third of the molecular formulas were present in all marine as well as in the mangrove samples. We infer that different forms of microbial degradation ultimately lead to similar structural features that are intrinsically refractory, independent of the source of the organic matter and the environmental conditions where degradation took place.

  13. Thallium isotope evidence for a permanent increase in marine organic carbon export in the early Eocene

    USGS Publications Warehouse

    Nielsen, S.G.; Mar-Gerrison, S.; Gannoun, A.; LaRowe, D.; Klemm, V.; Halliday, A.N.; Burton, K.W.; Hein, J.R.

    2009-01-01

    The first high resolution thallium (Tl) isotope records in two ferromanganese crusts (Fe-Mn crusts), CD29 and D11 from the Pacific Ocean are presented. The crusts record pronounced but systematic changes in 205Tl/203Tl that are unlikely to reflect diagenetic overprinting or changes in isotope fractionation between seawater and Fe-Mn crusts. It appears more likely that the Fe-Mn crusts track the Tl isotope composition of seawater over time. The present-day oceanic residence time of Tl is estimated to be about 20,000??yr, such that the isotopic composition should reflect ocean-wide events. New and published Os isotope data are used to construct age models for these crusts that are consistent with each other and significantly different from previous age models. Application of these age models reveals that the Tl isotope composition of seawater changed systematically between ~ 55??Ma and ~ 45??Ma. Using a simple box model it is shown that the present day Tl isotope composition of seawater depends almost exclusively on the ratio between the two principal output fluxes of marine Tl. These fluxes are the rate of removal of Tl from seawater via scavenging by authigenic Fe-Mn oxyhydroxide precipitation and the uptake rate of Tl during low temperature alteration of oceanic crust. It is highly unlikely that the latter has changed greatly. Therefore, assuming that the marine Tl budget has also not changed significantly during the Cenozoic, the low 205Tl/203Tl during the Paleocene is best explained by a more than four-fold higher sequestration of Tl by Fe-Mn oxyhydroxides compared with at the present day. The calculated Cenozoic Tl isotopic seawater curve displays a striking similarity to that of S, providing evidence that both systems may have responded to the same change in the marine environment. A plausible explanation is a marked and permanent increase in organic carbon export from ~ 55??Ma to ~ 45??Ma, which led to higher pyrite burial rates and a significantly reduced

  14. Microscale characterization of dissolved organic matter production and uptake in marine microbial mat communities

    NASA Technical Reports Server (NTRS)

    Paerl, H. W.; Bebout, B. M.; Joye, S. B.; Des Marais, D. J.

    1993-01-01

    Intertidal marine microbial mats exhibited biologically mediated uptake of low molecular weight dissolved organic matter (DOM), including D-glucose, acetate, and an L-amino acid mixture at trace concentrations. Uptake of all compounds occurred in darkness, but was frequently enhanced under natural illumination. The photosystem 2 inhibitor, 3-(3,4-dichlorophenyl)-1,1-dimethyl urea (DCMU) generally failed to inhibit light-stimulated DOM uptake. Occasionally, light plus DCMU-amended treatments led to uptake rates higher than light-incubated samples, possibly due to phototrophic bacteria present in subsurface anoxic layers. Uptake was similar with either 3H- or 14C-labeled substrates, indicating that recycling of labeled CO2 via photosynthetic fixation was not interfering with measurements of light-stimulated DOM uptake. Microautoradiographs showed a variety of pigmented and nonpigmented bacteria and, to a lesser extent, cyanobacteria and eucaryotic microalgae involved in light-mediated DOM uptake. Light-stimulated DOM uptake was often observed in bacteria associated with sheaths and mucilage surrounding filamentous cyanobacteria, revealing a close association of organisms taking up DOM with photoautotrophic members of the mat community. The capacity for dark- and light-mediated heterotrophy, coupled to efficient retention of fixed carbon in the mat community, may help optimize net production and accretion of mats, even in oligotrophic waters.

  15. Disruption of bacterial cell-to-cell communication by marine organisms and its relevance to aquaculture.

    PubMed

    Natrah, F M I; Defoirdt, Tom; Sorgeloos, Patrick; Bossier, Peter

    2011-04-01

    Bacterial disease is one of the most critical problems in commercial aquaculture. Although various methods and treatments have been developed to curb the problem, yet they still have significant drawbacks. A novel and environmental-friendly approach in solving this problem is through the disruption of bacterial communication or quorum sensing (QS). In this communication scheme, bacteria regulate their own gene expression by producing, releasing, and sensing chemical signals from the environment. There seems to be a link between QS and diseases through the regulation of certain phenotypes and the induction of virulence factors responsible for pathogen-host association. Several findings have reported that numerous aquatic organisms such as micro-algae, macro-algae, invertebrates, or even other bacteria have the potential to disrupt QS. The mechanism of action varies from degradation of signals through enzymatic or chemical inactivation to antagonistic as well as agonistic activities. This review focuses on the existing marine organisms that are able to interfere with QS with potential application for aquaculture as bacterial control. PMID:21246235

  16. Seasonal variation in accumulation of persistent organic pollutants in an Arctic marine benthic food web.

    PubMed

    Evenset, A; Hallanger, I G; Tessmann, M; Warner, N; Ruus, A; Borgå, K; Gabrielsen, G W; Christensen, G; Renaud, P E

    2016-01-15

    The aim of the present study was to investigate seasonal variation in persistent organic pollutant (POP) concentrations, as well as food-web biomagnification, in an Arctic, benthic marine community. Macrozoobenthos, demersal fish and common eiders were collected both inside and outside of Kongsfjorden, Svalbard, during May, July and October 2007. The samples were analysed for a selection of legacy chlorinated POPs. Overall, low levels of POPs were measured in all samples. Although POP levels and accumulation patterns showed some seasonal variation, the magnitude and direction of change was not consistent among species. Overall, seasonality in bioaccumulation in benthic biota was less pronounced than in the pelagic system in Kongsfjorden. In addition, the results indicate that δ(15)N is not a good predictor for POP-levels in benthic food chains. Other factors, such as feeding strategy (omnivory, necrophagy versus herbivory), degree of contact with the sediment, and a high dependence on particulate organic matter (POM), with low POP-levels and high δ(15)N-values (due to bacterial isotope enrichment), seem to govern the uptake of the different POPs and result in loads deviating from what would be expected consulting the trophic position alone. PMID:26519572

  17. Marine organism cell biology and regulatory sequence discoveryin comparative functional genomics.

    PubMed

    Barnes, David W; Mattingly, Carolyn J; Parton, Angela; Dowell, Lori M; Bayne, Christopher J; Forrest, John N

    2004-10-01

    The use of bioinformatics to integrate phenotypic and genomic data from mammalian models is well established as a means of understanding human biology and disease. Beyond direct biomedical applications of these approaches in predicting structure-function relationships between coding sequences and protein activities, comparative studies also promote understanding of molecular evolution and the relationship between genomic sequence and morphological and physiological specialization. Recently recognized is the potential of comparative studies to identify functionally significant regulatory regions and to generate experimentally testable hypotheses that contribute to understanding mechanisms that regulate gene expression, including transcriptional activity, alternative splicing and transcript stability. Functional tests of hypotheses generated by computational approaches require experimentally tractable in vitro systems, including cell cultures. Comparative sequence analysis strategies that use genomic sequences from a variety of evolutionarily diverse organisms are critical for identifying conserved regulatory motifs in the 5'-upstream, 3'-downstream and introns of genes. Genomic sequences and gene orthologues in the first aquatic vertebrate and protovertebrate organisms to be fully sequenced (Fugu rubripes, Ciona intestinalis, Tetraodon nigroviridis, Danio rerio) as well as in the elasmobranchs, spiny dogfish shark (Squalus acanthias) and little skate (Raja erinacea), and marine invertebrate models such as the sea urchin (Strongylocentrotus purpuratus) are valuable in the prediction of putative genomic regulatory regions. Cell cultures have been derived for these and other model species. Data and tools resulting from these kinds of studies will contribute to understanding transcriptional regulation of biomedically important genes and provide new avenues for medical therapeutics and disease prevention. PMID:19003267

  18. Analysis of marine sediment, water and biota for selected organic pollutants

    SciTech Connect

    Murray, H.E.; Ray, L.E.; Giam, C.S.

    1981-12-01

    The concentrations of various organic pollutants (benzo(a)pyrene (BaP), hexachlorobenzene (HCB) and pentachlorophenol (PCP) were determined in samples of water, sediment and biota (flounder, killifish, shrimp, crabs, and squid) from San Luis Pass, Texas. Sediment was also analyzed for polychlorinated biphenyls (PCBs), phthalic acid esters (PAEs) and various pesticides. Only PCP was detectable in water. In sediment, the relative concentrations were PAEs >> BaP > (PCBs approx. HCB) > PCP. In biota, BaP was not detectable in any animal; HCB was highest in crabs and PCP was highest in all others (flounder, killifish, shrimp and squid). The relative concentrations of HCB and PCP were different in the different organisms. The differences between the relative concentrations in the biota and in sediment are discussed. The results of this study are compared to values measured at other sites. This study is part of a larger effort to identify and quantitate pollutants in various Texas estuaries and to serve as a basis for monitoring marine pollution.

  19. Ecophysiology of uncultivated marine euryarchaea is linked to particulate organic matter

    PubMed Central

    Orsi, William D; Smith, Jason M; Wilcox, Heather M; Swalwell, Jarred E; Carini, Paul; Worden, Alexandra Z; Santoro, Alyson E

    2015-01-01

    Particles in aquatic environments host distinct communities of microbes, yet the evolution of particle-specialized taxa and the extent to which specialized microbial metabolism is associated with particles is largely unexplored. Here, we investigate the hypothesis that a widely distributed and uncultivated microbial group—the marine group II euryarchaea (MGII)—interacts with living and detrital particulate organic matter (POM) in the euphotic zone of the central California Current System. Using fluorescent in situ hybridization, we verified the association of euryarchaea with POM. We further quantified the abundance and distribution of MGII 16 S ribosomal RNA genes in size-fractionated seawater samples and compared MGII functional capacity in metagenomes from the same fractions. The abundance of MGII in free-living and >3 μm fractions decreased with increasing distance from the coast, whereas MGII abundance in the 0.8–3 μm fraction remained constant. At several offshore sites, MGII abundance was highest in particle fractions, indicating that particle-attached MGII can outnumber free-living MGII under oligotrophic conditions. Compared with free-living MGII, the genome content of MGII in particle-associated fractions exhibits an increased capacity for surface adhesion, transcriptional regulation and catabolism of high molecular weight substrates. Moreover, MGII populations in POM fractions are phylogenetically distinct from and more diverse than free-living MGII. Eukaryotic phytoplankton additions stimulated MGII growth in bottle incubations, providing the first MGII net growth rate measurements. These ranged from 0.47 to 0.54 d−1. However, MGII were not recovered in whole-genome amplifications of flow-sorted picoeukaryotic phytoplankton and heterotrophic nanoflagellates, suggesting that MGII in particle fractions are not physically attached to living POM. Collectively, our results support a linkage between MGII ecophysiology and POM, implying that

  20. Toxic Effect of a Marine Bacterium on Aquatic Organisms and Its Algicidal Substances against Phaeocystis globosa

    PubMed Central

    Yang, Qiuchan; Chen, Lina; Hu, Xiaoli; Zhao, Ling; Yin, Pinghe; Li, Qiang

    2015-01-01

    Harmful algal blooms have caused enormous damage to the marine ecosystem and the coastal economy in China. In this paper, a bacterial strain B1, which had strong algicidal activity against Phaeocystis globosa, was isolated from the coastal waters of Zhuhai in China. The strain B1 was identified as Bacillus sp. on the basis of 16S rDNA gene sequence and morphological characteristics. To evaluate the ecological safety of the algicidal substances produced by strain B1, their toxic effects on marine organisms were tested. Results showed that there were no adverse effects observed in the growth of Chlorella vulgaris, Chaetoceros muelleri, and Isochrystis galbana after exposure to the algicidal substances at a concentration of 1.0% (v/v) for 96 h. The 48h LC50 values for Brachionus plicatilis, Moina mongolica Daday and Paralichthys olivaceus were 5.7, 9.0 and 12.1% (v/v), respectively. Subsequently, the algicidal substances from strain B1 culture were isolated and purified by silica gel column, Sephadex G-15 column and high-performance liquid chromatography. Based on quadrupole time-of-flight mass spectrometry and PeakView Software, the purified substances were identified as prolyl-methionine and hypoxanthine. Algicidal mechanism indicated that prolyl-methionine and hypoxanthine inhibited the growth of P. globosa by disrupting the antioxidant systems. In the acute toxicity assessment using M. mongolica, 24h LC50 values of prolyl-methionine and hypoxanthine were 7.0 and 13.8 g/L, respectively. The active substances produced by strain B1 can be considered as ecologically and environmentally biological agents for controlling harmful algal blooms. PMID:25646807

  1. Ecophysiology of uncultivated marine euryarchaea is linked to particulate organic matter.

    PubMed

    Orsi, William D; Smith, Jason M; Wilcox, Heather M; Swalwell, Jarred E; Carini, Paul; Worden, Alexandra Z; Santoro, Alyson E

    2015-08-01

    Particles in aquatic environments host distinct communities of microbes, yet the evolution of particle-specialized taxa and the extent to which specialized microbial metabolism is associated with particles is largely unexplored. Here, we investigate the hypothesis that a widely distributed and uncultivated microbial group--the marine group II euryarchaea (MGII)--interacts with living and detrital particulate organic matter (POM) in the euphotic zone of the central California Current System. Using fluorescent in situ hybridization, we verified the association of euryarchaea with POM. We further quantified the abundance and distribution of MGII 16 S ribosomal RNA genes in size-fractionated seawater samples and compared MGII functional capacity in metagenomes from the same fractions. The abundance of MGII in free-living and >3 μm fractions decreased with increasing distance from the coast, whereas MGII abundance in the 0.8-3 μm fraction remained constant. At several offshore sites, MGII abundance was highest in particle fractions, indicating that particle-attached MGII can outnumber free-living MGII under oligotrophic conditions. Compared with free-living MGII, the genome content of MGII in particle-associated fractions exhibits an increased capacity for surface adhesion, transcriptional regulation and catabolism of high molecular weight substrates. Moreover, MGII populations in POM fractions are phylogenetically distinct from and more diverse than free-living MGII. Eukaryotic phytoplankton additions stimulated MGII growth in bottle incubations, providing the first MGII net growth rate measurements. These ranged from 0.47 to 0.54 d(-1). However, MGII were not recovered in whole-genome amplifications of flow-sorted picoeukaryotic phytoplankton and heterotrophic nanoflagellates, suggesting that MGII in particle fractions are not physically attached to living POM. Collectively, our results support a linkage between MGII ecophysiology and POM, implying that

  2. Screening for unicellular algae as possible bioassay organisms for monitoring marine water samples.

    PubMed

    Millán de Kuhn, Rosmary; Streb, Christine; Breiter, Roman; Richter, Peter; Neesse, Thomas; Häder, Donat-Peter

    2006-08-01

    ECOTOX is an automatic early warning system to monitor potential pollution of freshwater, municipal or industrial waste waters or aquatic ecosystems. It is based on a real time image analysis of the motility and orientation parameters of the unicellular, photosynthetic flagellate Euglena gracilis. In order to widen the use of the device to marine habitats and saline waters nine marine flagellates were evaluated as putative bioassay organisms, viz. Dunaliella salina, Dunaliella viridis, Dunaliella bardawil, Prorocentrum minimum Kattegat, P. minimum Lissabon, Tetraselmis suecica, Heterocapsa triquetra, Gyrodinium dorsum and Cryptomonas maculata. Because of their slow growth the last three strains were excluded from further evaluation. Selection criteria were ease of culture, density of cell suspension, stability of motility and gravitactic orientation. The sensitivity toward toxins was tested using copper(II) ions. The instrument allows the user to automatically determine effect-concentration (EC) curves from which the EC(50) values can be calculated. For the interpretation of the EC curves a sigmoid logistic model was proposed which proved to be satisfactory for all tested strains. The inhibition of the motility was considered as the most appropriate movement parameter as an endpoint. The Dunaliella species had the lowest sensitivity to copper with EC(50) values of 220, 198 and 176 mg/L for D. salina, D. bardawil and D. viridis, respectively, followed by T. suecica with an EC(50) value of 40 mg/L. The Prorocentrum species were found to be the most sensitive with an EC(50) value of 13.5 mg/L for P. minimum Lissabon and 7.5 mg/L for P. minimum Kattegat. PMID:16806394

  3. High field NMR spectroscopy and FTICR mass spectrometry: powerful discovery tools for the molecular level characterization of marine dissolved organic matter from the South Atlantic Ocean

    NASA Astrophysics Data System (ADS)

    Hertkorn, N.; Harir, M.; Koch, B. P.; Michalke, B.; Grill, P.; Schmitt-Kopplin, P.

    2012-01-01

    Non target high resolution organic structural spectroscopy of marine dissolved organic matter (DOM) isolated on 27 November 2008 by means of solid phase extraction (SPE) from four different depths in the South Atlantic Ocean off the Angola coast (3.1° E; -17.7° S; Angola basin) provided molecular level information of complex unknowns with unprecedented coverage and resolution. The sampling was intended to represent major characteristic oceanic regimes of general significance: 5 m (FISH; near surface photic zone), 48 m (FMAX; fluorescence maximum), 200 m (upper mesopelagic zone) and 5446 m (30 m above ground). 800 MHz proton (1H) nuclear magnetic resonance (NMR) 1H NMR, spectra were least affected by fast and differential transverse NMR relaxation and produced at first similar looking, rather smooth bulk NMR envelopes reflecting intrinsic averaging from massive signal overlap. Visibly resolved NMR signatures were most abundant in surface DOM but contributed at most a few percent to the total 1H NMR integral and were mainly limited to unsaturated and singly oxygenated carbon chemical environments. The relative abundance and variance of resolved signatures between samples was maximal in the aromatic region; in particular, the aromatic resolved NMR signature of the deep ocean sample at 5446 m was considerably different from that of all other samples. When scaled to equal total NMR integral, 1H NMR spectra of the four marine DOM samples revealed considerable variance in abundance for all major chemical environments across the entire range of chemical shift. Abundance of singly oxygenated CH units and acetate derivatives declined from surface to depth whereas aliphatics and carboxyl-rich alicyclic molecules (CRAM) derived molecules increased in abundance. Surface DOM contained a remarkably lesser abundance of methyl esters than all other marine DOM, likely a consequence of photodegradation from direct exposure to sunlight. All DOM showed similar overall 13C NMR

  4. Climate change affects low trophic level marine consumers: warming decreases copepod size and abundance.

    PubMed

    Garzke, Jessica; Ismar, Stefanie M H; Sommer, Ulrich

    2015-03-01

    Concern about climate change has re-ignited interest in universal ecological responses to temperature variations: (1) biogeographical shifts, (2) phenology changes, and (3) size shifts. In this study we used copepods as model organisms to study size responses to temperature because of their central role in the pelagic food web and because of the ontogenetic length constancy between molts, which facilitates the definition of size of distinct developmental stages. In order to test the expected temperature-induced shifts towards smaller body size and lower abundances under warming conditions, a mesocosm experiment using plankton from the Baltic Sea at three temperature levels (ambient, ambient +4 °C, ambient -4 °C) was performed in summer 2010. Overall copepod and copepodit abundances, copepod size at all life stages, and adult copepod size in particular, showed significant temperature effects. As expected, zooplankton peak abundance was lower in warm than in ambient treatments. Copepod size-at-immature stage significantly increased in cold treatments, while adult size significantly decreased in warm treatments. PMID:25413864

  5. Missing organic carbon in Eocene marine sediments: Is metabolism the biological feedback that maintains end-member climates?

    NASA Astrophysics Data System (ADS)

    Olivarez Lyle, Annette; Lyle, Mitchell W.

    2006-06-01

    Ocean chemistry is affected by pCO2 in the atmosphere by increasing the dissolution of solid calcium carbonate and elevating the dissolved inorganic carbon concentrations in seawater. Positive feedbacks between the ocean and atmosphere can maintain high atmospheric pCO2 and affect global climate. We report evidence for changes in the oceanic carbon cycle from the first high-quality organic carbon (Corg) data set of Eocene sediments beneath the equatorial Pacific upwelling region (Leg 199 of the Ocean Drilling Program). Eocene Corg mass accumulation rates (MARs) are 10 times lower than Holocene rates, even though expected Corg MARs estimated from biogenic-barium MARs (an indicator of biological production) equal or exceed modern fluxes. What happened to the missing Corg? Recent advances in ecology and biochemical kinetics show that the metabolism of nearly all animals, marine and terrestrial, is positively correlated by first principles to environmental temperatures. The approximately 10°C abyssal temperature difference from Eocene to Holocene should have radically reduced pelagic Corg burial, as we observe. We propose that higher basal metabolism and nutrient utilization/recycling rates in the Eocene water column and surface sediments precluded Corg sediment burial in the pelagic ocean. Increased rates of metabolism, nutrient utilization, and lowered Corg sedimentation caused by increased temperature may have acted as a biological feedback to maintain high atmospheric pCO2 and hothouse climates. Conversely, these same parameters would reverse sign to maintain low pCO2 when temperatures decrease, thereby maintaining "icehouse" conditions during cold climate regimes.

  6. Tracing Organic Carbon from the Terrestrial to Marine Environment via Coupled Stable Carbon Isotope and Lignin Analyses

    NASA Astrophysics Data System (ADS)

    Childress, L. B.; Blair, N. E.; Leithold, E. L.

    2010-12-01

    The Waipaoa sedimentary system of New Zealand offers an opportunity to study the impacts of tectonic, climatic and anthropogenic forcings on the export of organic carbon from land and its preservation in the seabed. The dominant sources of organic carbon from the watershed are sedimentary rocks, aged soils, and flora. Marine C is added to sediment mid-shelf. Differential export and burial of the organic C from the different sources provides an organic geochemical record of changes in terrestrial and marine processes. Analyses of four marine sediment cores collected near the mouth of the Waipaoa River by the MATACORE in 2006 reveal both downcore (temporal) as well as across shelf (spatial) trends in carbon isotope and lignin parameters. These trends, coupled with measurements from soil profiles, rocks and riverine suspended sediments reveal changes in organic carbon sources that relate to terrestrial mass wasting processes and plant succession. As examples, approximately 4 kyr ago an event characterized by increased woody gymnosperm input was captured. This event may have been initiated by extensive landsliding of forested terrain. Upcore from that interval, a shift to non-woody angiosperms is documented. This succession coincides with a period of volcanic eruptions and later, human intrusion.

  7. MOSAIC: An organic geochemical and sedimentological database for marine surface sediments

    NASA Astrophysics Data System (ADS)

    Tavagna, Maria Luisa; Usman, Muhammed; De Avelar, Silvania; Eglinton, Timothy

    2015-04-01

    Modern ocean sediments serve as the interface between the biosphere and the geosphere, play a key role in biogeochemical cycles and provide a window on how contemporary processes are written into the sedimentary record. Research over past decades has resulted in a wealth of information on the content and composition of organic matter in marine sediments, with ever-more sophisticated techniques continuing to yield information of greater detail and as an accelerating pace. However, there has been no attempt to synthesize this wealth of information. We are establishing a new database that incorporates information relevant to local, regional and global-scale assessment of the content, source and fate of organic materials accumulating in contemporary marine sediments. In the MOSAIC (Modern Ocean Sediment Archive and Inventory of Carbon) database, particular emphasis is placed on molecular and isotopic information, coupled with relevant contextual information (e.g., sedimentological properties) relevant to elucidating factors that influence the efficiency and nature of organic matter burial. The main features of MOSAIC include: (i) Emphasis on continental margin sediments as major loci of carbon burial, and as the interface between terrestrial and oceanic realms; (ii) Bulk to molecular-level organic geochemical properties and parameters, including concentration and isotopic compositions; (iii) Inclusion of extensive contextual data regarding the depositional setting, in particular with respect to sedimentological and redox characteristics. The ultimate goal is to create an open-access instrument, available on the web, to be utilized for research and education by the international community who can both contribute to, and interrogate the database. The submission will be accomplished by means of a pre-configured table available on the MOSAIC webpage. The information on the filled tables will be checked and eventually imported, via the Structural Query Language (SQL), into

  8. Molecular evidence for abiotic sulfurization of dissolved organic matter in marine shallow hydrothermal systems

    NASA Astrophysics Data System (ADS)

    Gomez-Saez, Gonzalo V.; Niggemann, Jutta; Dittmar, Thorsten; Pohlabeln, Anika M.; Lang, Susan Q.; Noowong, Ann; Pichler, Thomas; Wörmer, Lars; Bühring, Solveig I.

    2016-10-01

    recirculation in Milos seafloor. The four most effective potential sulfurization reactions were those exchanging an O atom by one S atom in the formula or the equivalent + H2S reaction, correspondingly exchanging H2O, H2 and/or O2 by a H2S molecule. Our study reveals novel insights into DOS dynamics in marine hydrothermal environments and provides a conceptual framework for molecular-scale mechanisms in organic sulfur geochemistry.

  9. Soil organic carbon stocks in estuarine and marine mangrove ecosystems are driven by nutrient colimitation of P and N.

    PubMed

    Weiss, Christian; Weiss, Joanna; Boy, Jens; Iskandar, Issi; Mikutta, Robert; Guggenberger, Georg

    2016-07-01

    Mangroves play an important role in carbon sequestration, but soil organic carbon (SOC) stocks differ between marine and estuarine mangroves, suggesting differing processes and drivers of SOC accumulation. Here, we compared undegraded and degraded marine and estuarine mangroves in a regional approach across the Indonesian archipelago for their SOC stocks and evaluated possible drivers imposed by nutrient limitations along the land-to-sea gradients. SOC stocks in natural marine mangroves (271-572 Mg ha(-1) m(-1)) were much higher than under estuarine mangroves (100-315 Mg ha(-1) m(-1)) with a further decrease caused by degradation to 80-132 Mg ha(-1) m(-1). Soils differed in C/N ratio (marine: 29-64; estuarine: 9-28), δ (15)N (marine: -0.6 to 0.7‰; estuarine: 2.5 to 7.2‰), and plant-available P (marine: 2.3-6.3 mg kg(-1); estuarine: 0.16-1.8 mg kg(-1)). We found N and P supply of sea-oriented mangroves primarily met by dominating symbiotic N2 fixation from air and P import from sea, while mangroves on the landward gradient increasingly covered their demand in N and P from allochthonous sources and SOM recycling. Pioneer plants favored by degradation further increased nutrient recycling from soil resulting in smaller SOC stocks in the topsoil. These processes explained the differences in SOC stocks along the land-to-sea gradient in each mangrove type as well as the SOC stock differences observed between estuarine and marine mangrove ecosystems. This first large-scale evaluation of drivers of SOC stocks under mangroves thus suggests a continuum in mangrove functioning across scales and ecotypes and additionally provides viable proxies for carbon stock estimations in PES or REDD schemes. PMID:27547332

  10. RESPONSES OF MARINE UNICELLULAR ALGAE TO BROMINATED ORGANIC COMPOUNDS IN SIX GROWTH MEDIA

    EPA Science Inventory

    Marine unicellular algae, Skeletonema costatum, Thalassiosira pseudonana, and Chlorella sp., were exposed to the industrial brominated compounds, tetrabromobisphenol A (TBBP), decabromobiphenyloxide (DBBO), hexabromocyclododecane (HBCD), pentabromomethylbenzene (PBMB), pentabromo...

  11. Assessing the trophic state and eutrophication of coastal marine systems: a new approach based on the biochemical composition of sediment organic matter.

    PubMed

    Dell'Anno, A; Mei, M L; Pusceddu, A; Danovaro, R

    2002-07-01

    We used a biochemical approach based on the analysis of the quality and quantity of sedimentary organic matter for identifying new descriptors of the trophic state and environmental quality of coastal marine systems. A large-scale study, including 99 stations, belonging to 33 transects, was carried out along 250 km of the Apulian coasts (Mediterranean Sea) in March and September 2000. The investigated area covered a wide range of anthropogenic impacts (industrial ports, tourist harbours, areas affected by power plants and industrial wastes, mariculture areas). Other sites, including marine protected areas (i.e., without any apparent impact), were used as "control". Water column and benthic parameters provided different indications and classifications of the trophic state of coastal marine systems. We found that phytopigment content of the sediments changed in response to all different sources of anthropogenic impact and resulted in a useful descriptor of the trophic state and environmental quality. Highest sediment chlorophyll-a concentrations, indicating conditions of increasing eutrophication, were found in areas impacted by the discharge of heated waters from a power plant. In particular, the contribution of the autotrophic biomass to the biopolymeric carbon pool appeared to be a good descriptor of the decreasing environmental quality. Independently from the sampling period or the pollution source such contribution was significantly lower in transects subjected to anthropogenic impact than in control areas. Differences in trophic conditions were evident both in terms of quantity (i.e., total organic matter content) and quality (i.e., biochemical composition) of sediment organic matter. In particular, sediment protein concentration appeared to be a good descriptor of the trophic state of the benthic systems at different spatial scales. Multivariate (MDS) analysis allowed identifying areas characterised by hypertrophic, eutrophic and meso-oligotrophic conditions

  12. Marine biology

    SciTech Connect

    Thurman, H.V.; Webber, H.H.

    1984-01-01

    This book discusses both taxonomic and ecological topics on marine biology. Full coverage of marine organisms of all five kingdoms is provided, along with interesting and thorough discussion of all major marine habitats. Organization into six major parts allows flexibility. It also provides insight into important topics such as disposal of nuclear waste at sea, the idea that life began on the ocean floor, and how whales, krill, and people interact. A full-color photo chapter reviews questions, and exercises. The contents are: an overview marine biology: fundamental concepts/investigating life in the ocean; the physical ocean, the ocean floor, the nature of water, the nature and motion of ocean water; general ecology, conditions for life in the sea, biological productivity and energy transfer; marine organisms; monera, protista, mycota and metaphyta; the smaller marine animals, the large animals marine habitats, the intertidal zone/benthos of the continental shelf, the photic zone, the deep ocean, the ocean under stress, marine pollution, appendix a: the metric system and conversion factors/ appendix b: prefixes and suffixes/ appendix c: taxonomic classification of common marine organisms, and glossary, and index.

  13. Mechanical biological treatment of organic fraction of MSW affected dissolved organic matter evolution in simulated landfill.

    PubMed

    Salati, Silvia; Scaglia, Barbara; di Gregorio, Alessandra; Carrera, Alberto; Adani, Fabrizio

    2013-08-01

    The aim of this paper was to study the evolution of DOM during 1 year of observation in simulated landfill, of aerobically treated vs. untreated organic fraction of MSW. Results obtained indicated that aerobic treatment of organic fraction of MSW permitted getting good biological stability so that, successive incubation under anaerobic condition in landfill allowed biological process to continue getting a strong reduction of soluble organic matter (DOM) that showed, also, an aromatic character. Incubation of untreated waste gave similar trend, but in this case DOM decreasing was only apparent as inhibition of biological process in landfill did not allow replacing degraded/leached DOM with new material coming from hydrolysis of fresh OM. PMID:23743423

  14. Percent methylmercury and organic mercury in tissues of marine mammals and fish using different experimental and calculation methods

    SciTech Connect

    Wagemann, R.; Trebacz, E.; Hunt, R.; Boila, G.

    1997-09-01

    Muscle and liver tissues of marine mammals and fish were extracted with methylene chloride-hexane (DCM-hexane) or toluene and the extracts were analyzed for organic mercury by cold vapor atomic absorption spectroscopy (CVAAS) and for methylmercury by gas liquid chromatography with an electron capture detector (GC-ECD). Total mercury in tissues was determined by VCAAS. Methylmercury and organic mercury concentrations in muscle agreed with each other and with total mercury for both marine mammals and fish, indicating that on average 100% of the total mercury in this tissue was in the form of methylmercury. Either total mercury or organic mercury determined by CVAAS was found to be a valid measure of the average methylmercury concentration in muscles of marine mammals and fish. In liver, the CVAAS method produced higher mercury values (15% organic mercury) than the GC-ECD method (6% methylmercury), methylmercury being only 38% of organic mercury. From this, the presence of organic mercury compound(s) other than methylmercury was inferred. The CVAAS method produced a biased estimate of methylmercury in liver; an accurate measure of methylmercury in this tissue was obtained by GC-ECD, either with DCM-hexane or with toluene extraction. The DCM-hexane extract could be directly analyzed by CVAAS for organic mercury while toluene required an additional back-extraction step for such a determination. In calculating the average percentage of methylmercury and organic mercury in a sample, three different calculation methods were used. Only one of them, linear, robust regression analysis produced acceptable results when the variables (MeHg, organic Hg, total Hg) were significantly correlated. The other two methods overestimated the mean percentage under these conditions.

  15. Contrasting effects of marine and terrestrially derived dissolved organic matter on mercury speciation and bioavailability in seawater.

    PubMed

    Schartup, Amina T; Ndu, Udonna; Balcom, Prentiss H; Mason, Robert P; Sunderland, Elsie M

    2015-05-19

    Methylmercury (MeHg) is the only species of mercury (Hg) to biomagnify in aquatic food-webs to levels that are a widespread concern for human and ecological health. Here we investigate the association between dissolved organic matter (DOM) in seawater and Hg speciation and uptake using experimental data and field measurements from Long Island Sound (LIS) and the Northwestern Atlantic continental margin. We measured differences in DOM composition across sampling stations using excitation emission matrix fluorescence spectroscopy and further separated DOM into terrestrial and marine components using Parallel Factor Analysis (PARAFAC). Highest MeHg concentrations were found in the estuarine stations (LIS) with highest DOM concentrations due to enhanced external inputs from the watershed and rivers. For stations on the shelf and slope, MeHg in plankton increased linearly with a decreasing fraction of fluorescence attributable to DOM components with a terrestrial rather than marine origin. These results are corroborated by experimental data showing higher MeHg uptake by cells in the presence of predominantly marine DOM compared to terrestrial DOM. Highest fractions of dissolved gaseous mercury were also found at stations with the highest marine DOM content, suggesting a greater reducible fraction of divalent inorganic Hg. These data suggest DOM composition is a critical driver of Hg reactivity and bioavailability in offshore marine waters. PMID:25877683

  16. Environmental and human health risk assessment of organic micro-pollutants occurring in a Spanish marine fish farm.

    PubMed

    Muñoz, Ivan; Martínez Bueno, María J; Agüera, Ana; Fernández-Alba, Amadeo R

    2010-05-01

    In this work the risk posed to seawater organisms, predators and humans is assessed, as a consequence of exposure to 12 organic micro-pollutants, namely metronidazole, trimethoprim, erythromycin, simazine, flumequine, carbaryl, atrazine, diuron, terbutryn, irgarol, diphenyl sulphone (DPS) and 2-thiocyanomethylthiobenzothiazole (TCMTB). The risk assessment study is based on a 1-year monitoring study at a Spanish marine fish farm, involving passive sampling techniques. The results showed that the risk threshold for irgarol concerning seawater organisms is exceeded. On the other hand, the risk to predators and especially humans through consumption of fish is very low, due to the low bioconcentration potential of the substances assessed. PMID:19932535

  17. Bioelectric fields of marine organisms: voltage and frequency contributions to detectability by electroreceptive predators.

    PubMed

    Bedore, Christine N; Kajiura, Stephen M

    2013-01-01

    Behavioral responses of elasmobranch fishes to weak electric fields have been well studied. These studies typically employ a stimulator that produces a dipole electric field intended to simulate the natural electric field of prey items. However, the characteristics of bioelectric fields have not been well described. The magnitude and frequency of the electric field produced by 11 families of marine organisms were quantified in this study. Invertebrate electric potentials ranged from 14 to 28 μV and did not differ from those of elasmobranchs, which ranged from 18 to 30 μV. Invertebrates and elasmobranchs produced electric potentials smaller than those of teleost fishes, which ranged from 39 to 319 μV. All species produced electric fields within the frequency range that is detectable by elasmobranch predators (<16 Hz), with the highest frequencies produced by the penaeids (10.3 Hz) and the gerreids (4.6 Hz). Although voltage differed by family, there was no relationship between voltage and mass or length of prey. Differences in prey voltage may be related to osmoregulatory strategies; invertebrates and elasmobranchs are osmoconformers and have less ion exchange with the surrounding seawater than teleosts species, which are hyposmotic. As predicted, voltage production was greatest at the mucous membrane-lined mouth and gills, which are sites of direct ion exchange with the environment. PMID:23629880

  18. Fluorescence Characterization of Dissolved Organic Matter (DOC) from Marine and Terrestrial Hydrothermal Systems

    NASA Astrophysics Data System (ADS)

    Hartnett, H. E.; Coe, J. D.; Smith, Z. P.

    2013-12-01

    Hydrothermal ecosystems exhibit a wide range in temperature, pH, and solute concentrations, including dissolved organic carbon (DOC). Here we compare DOC concentrations among marine (Iheya North Field, East China Sea) and terrestrial (Yunnan Province, China and Yellowstone National Park, USA) hydrothermal systems. We further characterize DOC fluorescence in these three systems using 3D excitation-emission matrix spectroscopy (EEMs) and PARAFAC modeling. DOC concentrations in pore waters from the Iheya North hydrothermal field are always extremely low (<1 mg/L) and EEMs analysis suggests the DOC is of microbial origin. DOC concentrations in terrestrial springs from both China and Yellowstone have somewhat consistent variations with pH; generally, there are lower DOC concentrations in alkaline springs and higher, but more variable, DOC concentrations in acidic springs. DOC concentrations in alkaline springs are generally <2 mg/L, but in acidic hot springs DOC can be >100 mg/L. Fluorescence analysis of DOC from terrestrial hot springs reveals that some, but by no means all, of the fluorophores exhibit relationships with pH similar to those of the bulk DOC. In contrast, other fluorophores vary independently of the bulk DOC concentration. The DOC in hot springs from both China and Yellowstone appears to be predominantly of microbial origin but there are as yet unidentified fluorophores in both regions that could be unique tracers for DOC in hydrothermal systems.

  19. Sedative-Hypnotic and Receptor Binding Studies of Fermented Marine Organisms.

    PubMed

    Joung, Hye-Young; Kang, Young Mi; Lee, Bae-Jin; Chung, Sun Yong; Kim, Kyung-Soo; Shim, Insop

    2015-09-01

    This study was performed to investigate the sedative-hypnotic activity of γ-aminobutyric acid (GABA)-enriched fermented marine organisms (FMO), including sea tangle (FST) and oyster (FO) by Lactobacillus brevis BJ20 (L. brevis BJ20). FST and FO were tested for their binding activity of the GABAA-benzodiazepine and 5-HT2C receptors, which are well-known molecular targets for sleep aids. We also measured the sleep latency and sleep duration during pentobarbital-induced sleep in mice after oral administration of FST and FO. In GABAA and 5-HT2C receptor binding assays, FST displayed an effective concentration-dependent binding affinity to GABAA receptor, similar to the binding affinity to 5-HT2C receptor. FO exhibited higher affinity to 5-HT2C receptor, compared with the GABAA receptor. The oral administration of FST and FO produced a dose-dependent decrease in sleep latency and increase in sleep duration in pentobarbital-induced hypnosis. The data demonstrate that FST and FO possess sedative-hypnotic activity possibly by modulating GABAA and 5-HT2C receptors. We propose that FST and FO might be effective agents for treatment of insomnia. PMID:26336589

  20. Critical body residues in the marine amphipod Ampelisca abdita: Sediment exposures with nonionic organic contaminants

    SciTech Connect

    Fay, A.A.; Brownawell, B.J.; Elskus, A.A.; McElroy, A.E.

    2000-04-01

    Body residues associated with acute toxicity were determined in the marine amphipod Ampelisca abdita exposed to spiked sediments. Nonylphenol and 2,2{prime},4,4{prime}-tetrachlorobiphenyl critical body residues (CBRs, body residue of contaminant at 50% mortality) were 1.1 {micro}mol/g wet tissue and 0.57 {micro}mol/g wet tissue, respectively, values near the low end of the CBR range expected for compounds acting via narcosis. The polycyclic aromatic hydrocarbons tested, benzo[a]pyrene (BaP) and benz[a]anthracene (BaA), were not acutely toxic at exposure concentrations of up to 43 and 1,280 {micro}g/g dry sediment for BaA and BaP respectively, and body burdens up to 1.2 {micro}mol/g wet tissue (for BaP). Neither polycyclic aromatic hydrocarbon (PAH) was significantly metabolized by A. abdita. The microextraction technique employed here allowed residue analysis of samples containing as few as three amphipods (0.33 mg dry wt). The CBR approach avoids confounding factors such as variations in bioavailability and uptake kinetics and could be employed to assess the relative contribution of specific contaminants or contaminant classes in mixtures to effects observed in toxicity tests with Ampelisca and other organisms.

  1. Quick, portable toxicity testing of marine or terrigenous fluids, sediments, or chemicals with bioluminescent organism

    SciTech Connect

    Sabate, R.W.; Stiffey, A.V.; Dewailly, E.L.

    1995-12-31

    A hand-held, battery-operated instrument, which measures bioluminescence inhibition of the microscopic marine dinoflagellate Pyrocystis lunula, is capable of field-testing substances for toxicity. The organism is sensitive to ppb of strong toxicants. It tolerates some solvents in concentrations necessary for testing lipophylic samples. A test consumes only micrograms of sample. This method requires no adjustments for salinity, pH, color, or turbidity. It has been used successfully to test oil-well drilling fluids, brines produced with oil, waters and sediments from streams and lakes and petroleum-plant effluents containing contaminants such as benzene. The test is non-specific; however, if the substance is known, the end-point effects a direct measurement of its concentration. One-hour toxicity screening tests in the field produce results comparable to the standard four-hour laboratory test. Keeping the sample in the dark during incubation and testing, together with shortness of the overall procedure, eliminates anomalies from light-sensitive substances. Day-to-day variation, as well as among test replicates, is less than 10%. This quick method yields results comparable with a quick test that uses Photobacterium phosphoria, and with 96-hour tests that use Mysidopsis bahia, Artemia salina, Gonyaulax polyedra, Pimephales promelas, Ceriodaphnia dubia, and Cyprinodon variegatus.

  2. Sedative-Hypnotic and Receptor Binding Studies of Fermented Marine Organisms

    PubMed Central

    Joung, Hye-Young; Kang, Young Mi; Lee, Bae-Jin; Chung, Sun Yong; Kim, Kyung-Soo; Shim, Insop

    2015-01-01

    This study was performed to investigate the sedative-hypnotic activity of γ-aminobutyric acid (GABA)-enriched fermented marine organisms (FMO), including sea tangle (FST) and oyster (FO) by Lactobacillus brevis BJ20 (L. brevis BJ20). FST and FO were tested for their binding activity of the GABAA-benzodiazepine and 5-HT2C receptors, which are well-known molecular targets for sleep aids. We also measured the sleep latency and sleep duration during pentobarbital-induced sleep in mice after oral administration of FST and FO. In GABAA and 5-HT2C receptor binding assays, FST displayed an effective concentration-dependent binding affinity to GABAA receptor, similar to the binding affinity to 5-HT2C receptor. FO exhibited higher affinity to 5-HT2C receptor, compared with the GABAA receptor. The oral administration of FST and FO produced a dose-dependent decrease in sleep latency and increase in sleep duration in pentobarbital-induced hypnosis. The data demonstrate that FST and FO possess sedative-hypnotic activity possibly by modulating GABAA and 5-HT2C receptors. We propose that FST and FO might be effective agents for treatment of insomnia. PMID:26336589

  3. Bioaccumulation of metallic trace elements and organic pollutants in marine sponges from the South Brittany Coast, France.

    PubMed

    Gentric, Charline; Rehel, Karine; Dufour, Alain; Sauleau, Pierre

    2016-01-01

    The purpose of this study was to compare the accumulation of metallic and organic pollutants in marine sponges with the oyster Crassostrea gigas used as sentinel species. The concentrations of 12 Metallic Trace Elements (MTEs), 16 Polycyclic Aromatic Hydrocarbons (PAHs), 7 PolyChlorinated Biphenyls (PCBs), and 3 organotin derivatives were measured in 7 marine sponges collected in the Etel River (South Brittany, France). Results indicated Al, Co, Cr, Fe, Pb, and Ti particularly accumulated in marine sponges such as Hymeniacidon perlevis and Raspailia ramosa at higher levels compared to oysters. At the opposite, Cu and Zn accumulated significantly at higher concentrations in oysters. Among PAHs analyzed, benzo(a)pyrene bioaccumulated in H. perlevis at levels up to 17-fold higher than in oysters. In contrast, PCBs bioaccumulated preferentially in oysters. Significant differences exist in the abilities of marine phyla and sponge species to accumulate organic and metallic pollutants however, among the few sponge species studied, H. perlevis showed impressive bioaccumulation properties. The use of this species as bioindicator and/or bioremediator near shellfish farming areas is also discussed. PMID:26634290

  4. Multiple stress effects on marine planktonic organisms: Influence of temperature on the toxicity of polycyclic aromatic hydrocarbons to Tetraselmis chuii

    NASA Astrophysics Data System (ADS)

    Vieira, L. R.; Guilhermino, L.

    2012-08-01

    In the present context of global warming and increasing long-range transport of oil and goods by sea potentially resulting in oil spills, more knowledge on the toxicological interactions between temperature and oil components on marine organisms is urgently needed. Therefore, the effects of temperature increase on the toxicity of three polycyclic aromatic hydrocarbons (PAH; anthracene, phenanthrene and naphthalene) to the marine planktonic algae Tetraselmis chuii were investigated under laboratory conditions. T. chuii cultures were exposed for 96 h to different concentrations of each of the test substances at both 20 and 25 °C. Effect criterion was the inhibition of culture growth assessed at 24 h intervals. All the PAHs significantly reduced T. chuii growth after 96 h of exposure with 20% inhibition concentrations between 0.052 and 1.124 mg L- 1 at 20 °C, and between 0.048 and 0.831 mg L- 1 at 25 °C. At both temperatures, the ranking, in order of decreasing toxicity based on the 50% inhibition concentration, was phenanthrene > naphthalene > anthracene. The increase of temperature by 5 °C significantly increased the toxicity of all the PAHs tested. These findings highlight the importance of considering temperature variation in the ecological risk assessment of oil and other chemical spills in the marine environment, and the need of more research on the toxic effects of multiple stressors on marine organisms.

  5. Crude oil affecting the biomass of the marine copepod Calanus finmarchicus: Comparing a simple and complex population model.

    PubMed

    De Hoop, Lisette; Broch, Ole Jacob; Hendriks, A Jan; De Laender, Frederik

    2016-08-01

    In the current study differences were evaluated between a complex 3D multistage population model (SINMOD) and a simpler consumer-resource population model for estimating the effects of crude oil on the marine copepod Calanus finmarchicus. The SINTEF OSCAR model was used to simulate hypothetical oil spills in the Lofoten area in 1995, 1997, and 2001. Both population models simulated a negligible effect of crude oil on the Calanus' biomass when assuming low species sensitivity. The simple model estimated a larger effect on the biomass (up to a 100% decline) compared to the complex model (maximum decline of 60-80%) at high species sensitivity to crude oil. These differences may be related to the inclusion of copepod advection in the complex model. Our study showed that if little data is available to parameterize a model, or if computational resources are scarce, the simple model could be used for risk screening. Nevertheless, the possibility of including a dilution factor for time-varying biomass should be examined to improve the estimations of the simple model. The complex model should be used for a more in depth risk analysis, as it includes physical processes such as the drift of organisms and differentiation between developmental stages. PMID:27326463

  6. Hydration and chain entanglement determines the optimum thickness of poly(HEMA-co-PEG₁₀MA) brushes for effective resistance to settlement and adhesion of marine fouling organisms.

    PubMed

    Yandi, Wetra; Mieszkin, Sophie; Martin-Tanchereau, Pierre; Callow, Maureen E; Callow, James A; Tyson, Lyndsey; Liedberg, Bo; Ederth, Thomas

    2014-07-23

    Understanding how surface physicochemical properties influence the settlement and adhesion of marine fouling organisms is important for the development of effective and environmentally benign marine antifouling coatings. We demonstrate that the thickness of random poly(HEMA-co-PEG10MA) copolymer brushes affect antifouling behavior. Films of thicknesses ranging from 50 to 1000 Å were prepared via surface-initiated atom-transfer radical polymerization and characterized using infrared spectroscopy, ellipsometry, atomic force microscopy and contact angle measurements. The fouling resistance of these films was investigated by protein adsorption, attachment of the marine bacterium Cobetia marina, settlement and strength of attachment tests of zoospores of the marine alga Ulva linza and static immersion field tests. These assays show that the polymer film thickness influenced the antifouling performance, in that there is an optimum thickness range, 200-400 Å (dry thickness), where fouling of all types, as well as algal spore adhesion, was lower. Field test results also showed lower fouling within the same thickness range after 2 weeks of immersion. Studies by quartz crystal microbalance with dissipation and underwater captive bubble contact angle measurements show a strong correlation between lower fouling and higher hydration, viscosity and surface energy of the poly(HEMA-co-PEG10MA) brushes at thicknesses around 200-400 Å. We hypothesize that the reduced antifouling performance is caused by a lower hydration capacity of the polymer for thinner films, and that entanglement and crowding in the film reduces the conformational freedom, hydration capacity and fouling resistance for thicker films. PMID:24945705

  7. OMU Organization and Personnel. Evaluation of the Marine Corps Task Analysis Program. Technical Report No. 6.

    ERIC Educational Resources Information Center

    Yoder, Dale; And Others

    The basic mission of the Office of Manpower Utilization (OMU) of the U.S. Marine Corps is to conduct Task Analyses of Marine Corps Occupational Fields. In its desire to maximize its effectiveness, OMU requested an independent evaluation of its program. This report summarizes studies and results of part of that evaluation, Research Area 5, "OMU…

  8. Molecular characterization of water soluble organic nitrogen in marine rainwater by ultra-high resolution electrospray ionization mass spectrometry

    NASA Astrophysics Data System (ADS)

    Altieri, K. E.; Hastings, M. G.; Peters, A. J.; Sigman, D. M.

    2011-11-01

    Atmospheric water soluble organic nitrogen (WSON) is a subset of the complex organic matter in aerosols and rainwater, which impacts cloud condensation processes and aerosol chemical and optical properties, and may play a significant role in the biogeochemical cycle of N. However, its sources, composition, connections to inorganic N, and variability are largely unknown. Rainwater samples were collected on the island of Bermuda (32.27° N, 64.87° W), which experiences both anthropogenic and marine influenced air masses. Samples were analyzed by ultra-high resolution electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry to chemically characterize the WSON. Elemental compositions of 2455 N containing compounds were determined over the mass range m/z+ 50 to 500. The five compound classes with the largest number of elemental formulas identified, in order from the highest number of formulas to the lowest, contained carbon, hydrogen, oxygen, and nitrogen (CHON+), CHON compounds that contained sulfur (CHONS+), CHON compounds that contained phosphorous (CHONP+), CHON compounds that contained both sulfur and phosphorous (CHONSP+), and compounds that contained only carbon, hydrogen, and nitrogen (CHN+). No organonitrates or nitrooxy-organosulfates were detected, but there was an increased presence of organic S and organic P containing compounds in the marine rainwater. Compared to rainwater collected in the continental USA, average O:C ratios of all N containing compound classes were lower in the marine samples whereas double bond equivalent values were higher, suggesting a reduced role of secondary formation mechanisms. Cluster analysis showed a clear chemical distinction between samples collected during the cold season (October to March) which have anthropogenic air mass origins and samples collected during the warm season (April to September) with remote marine air mass origins. This, in conjunction with patterns identified in van Krevelen

  9. Molecular characterization of water soluble organic nitrogen in marine rainwater by ultra-high resolution electrospray ionization mass spectrometry

    NASA Astrophysics Data System (ADS)

    Altieri, K. E.; Hastings, M. G.; Peters, A. J.; Sigman, D. M.

    2012-04-01

    Atmospheric water soluble organic nitrogen (WSON) is a subset of the complex organic matter in aerosols and rainwater, which impacts cloud condensation processes and aerosol chemical and optical properties and may play a significant role in the biogeochemical cycle of N. However, its sources, composition, connections to inorganic N, and variability are largely unknown. Rainwater samples were collected on the island of Bermuda (32.27° N, 64.87° W), which experiences both anthropogenic and marine influenced air masses. Samples were analyzed by ultra-high resolution electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry to chemically characterize the WSON. Elemental compositions of 2281 N containing compounds were determined over the mass range m/z+ 50 to 500. The five compound classes with the largest number of elemental formulas identified, in order from the highest number of formulas to the lowest, contained carbon, hydrogen, oxygen, and nitrogen (CHON+), CHON compounds that contained sulfur (CHONS+), CHON compounds that contained phosphorus (CHONP+), CHON compounds that contained both sulfur and phosphorus (CHONSP+), and compounds that contained only carbon, hydrogen, and nitrogen (CHN+). Compared to rainwater collected in the continental USA, average O:C ratios of all N containing compound classes were lower in the marine samples whereas double bond equivalent values were higher, suggesting a reduced role of secondary formation mechanisms. Despite their prevalence in continental rainwater, no organonitrates or nitrooxy-organosulfates were detected, but there was an increased presence of organic S and organic P containing compounds in the marine rainwater. Cluster analysis showed a clear chemical distinction between samples collected during the cold season (October to March) which have anthropogenic air mass origins and samples collected during the warm season (April to September) with remote marine air mass origins. This, in

  10. Heterogeneous sources of oxygenated hydrocarbons in the tropical free troposphere: Field evidence for a biogeochemical cycle of marine organic carbon?

    NASA Astrophysics Data System (ADS)

    Volkamer, R.; Apel, E. C.; Baidar, S.; Coburn, S.; Dix, B. K.; Hornbrook, R. S.; Pierce, R.; Ortega, I.; Romashkin, P.; Wang, S.

    2013-12-01

    Oceans cover 70% of the Earth surface, and the amount of dissolved organic carbon (DOC) contained in the world's oceans is comparable to that of atmospheric CO2. Yet oceans are currently believed to be a net-receptor for organic carbon that is emitted over land. Recent our observations of very short-lived and very water soluble oxygenated hydrocarbons, like glyoxal, in the remote marine boundary layer (MBL) above the Pacific Ocean (Sinreich et al., 2010, ACP) remain as of yet unexplained by atmospheric models. Organic carbon is relevant in the atmosphere because it influences the reactive chemical removal pathways of climate active gases (i.e., ozone, methane, dimethyl-sulfide), and can modify aerosols (e.g., secondary organic aerosol, SOA). This presentation provides a comprehensive field evidence that small oxygenated molecules (glyoxal, methyl ethyl ketone, butanal) from marine sources are widespread also in the tropical free troposphere. The data were collected as part of the Tropical Ocean tRoposphere Exchange experiment TORERO during Jan/Feb 2012 by means of an innovative payload of optical spectroscopic-, mass spectrometric-, and remote sensing instruments aboard the NSF/NCAR GV aircraft (HIAPER), and aboard a NOAA ship. We have measured oxygenated hydrocarbons, and volatile organic compounds (some 50+ species), aerosol size distributions, photolysis frequencies and other parameters over the full tropospheric air column (0-15km altitude) between 40N to 40S latitude over the eastern tropical Pacific Ocean. We investigate the source mechanism, present source estimates of the organic carbon flux, and compare it with other sources of organic carbon from marine sources. We also present results from numerical models that suggest a strong impact of these molecules on the oxidative capacity of the tropical free troposphere, where most of tropospheric ozone mass resides, 60-80% of the global methane destruction occurs, and mercury oxidation rates are accelerated at

  11. Lethal effects on different marine organisms, associated with sediment-seawater acidification deriving from CO2 leakage.

    PubMed

    Basallote, M D; Rodríguez-Romero, A; Blasco, J; DelValls, A; Riba, I

    2011-08-01

    CO(2) leakages during carbon capture and storage in sub-seabed geological structures could produce potential impacts on the marine environment. To study lethal effects on marine organisms attributable to CO(2) seawater acidification, a bubbling CO(2) system was designed enabling a battery of different tests to be conducted, under laboratory conditions, employing various pH treatments (8.0, 7.5, 7.0, 6.5, 6.0, and 5.5). Assays were performed of three exposure routes (seawater, whole sediment, and sediment elutriate). Individuals of the clam (Ruditapes philippinarum) and early-life stages of the gilthead seabream, Sparus aurata, were exposed for 10 days and 72 h, respectively, to acidified clean seawater. S. aurata larvae were also exposed to acidified elutriate samples, and polychaete organisms of the specie Hediste diversicolor and clams R. philippinarum were also exposed for 10 days to estuarine whole sediment. In the fish larvae elutriate test, 100 % mortality was recorded at pH 6.0, after 48 h of exposure. Similar results were obtained in the clam sediment exposure test. In the other organisms, significant mortality (p < 0.05) was observed at pH values lower than 6.0. Very high lethal effects (calculating L[H(+)]50, defined as the H(+) concentration that causes lethal effects in 50 % of the population exposed) were detected in association with the lowest pH treatment for all the species. The implication of these results is that a severe decrease of seawater pH would cause high mortality in marine organisms of several different kinds and life stages. The study addresses the potential risks incurred due to CO(2) leakages in marine environments. PMID:22828884

  12. High field NMR spectroscopy and FTICR mass spectrometry: powerful discovery tools for the molecular level characterization of marine dissolved organic matter from the South Atlantic Ocean

    NASA Astrophysics Data System (ADS)

    Hertkorn, N.; Harir, M.; Koch, B. P.; Michalke, B.; Grill, P.; Schmitt-Kopplin, P.

    2012-01-01

    Non target high resolution organic structural spectroscopy of marine dissolved organic matter (DOM) isolated on 27 November 2008 by means of solid phase extraction (SPE) from four different depths in the South Atlantic Ocean off the Angola coast (3.1° E; -17.7° S; Angola basin) provided molecular level information of complex unknowns with unprecedented coverage and resolution. The sampling was intended to represent major characteristic oceanic regimes of general significance: 5 m (FISH; near surface photic zone), 48 m (FMAX; fluorescence maximum), 200 m (upper mesopelagic zone) and 5446 m (30 m above ground). 800 MHz proton (1H) nuclear magnetic resonance (NMR) 1H NMR, spectra were least affected by fast and differential transverse NMR relaxation and produced at first similar looking, rather smooth bulk NMR envelopes reflecting intrinsic averaging from massive signal overlap. Visibly resolved NMR signatures were most abundant in surface DOM but contributed at most a few percent to the total 1H NMR integral and were mainly limited to unsaturated and singly oxygenated carbon chemical environments. The relative abundance and variance of resolved signatures between samples was maximal in the aromatic region; in particular, the aromatic resolved NMR signature of the deep ocean sample at 5446 m was considerably different from that of all other samples. When scaled to equal total NMR integral, 1H NMR spectra of the four marine DOM samples revealed considerable variance in abundance for all major chemical environments across the entire range of chemical shift. Abundance of singly oxygenated CH units and acetate derivatives declined from surface to depth whereas aliphatics and carboxyl-rich alicyclic molecules (CRAM) derived molecules increased in abundance. Surface DOM contained a remarkably lesser abundance of methyl esters than all other marine DOM, likely a consequence of photodegradation from direct exposure to sunlight. All DOM showed similar overall 13C NMR

  13. Chromosomal organization and evolutionary history of Mariner transposable elements in Scarabaeinae coleopterans

    PubMed Central

    2013-01-01

    Background With the aim to increase the knowledge on the evolution of coleopteran genomes, we investigated through cytogenetics and nucleotide sequence analysis Mariner transposons in three Scarabaeinae species (Coprophanaeus cyanescens, C. ensifer and Diabroctis mimas). Results The cytogenetic mapping revealed an accumulation of Mariner transposon in the pericentromeric repetitive regions characterized as rich in heterochromatin and C 0 t-1 DNA fraction (DNA enriched with high and moderately repeated sequences). Nucleotide sequence analysis of Mariner revealed the presence of two major groups of Mariner copies in the three investigated coleoptera species. Conclusions The Mariner is accumulated in the centromeric area of the coleopteran chromosomes probably as a consequence of the absence of recombination in the heterochromatic regions. Our analysis detected high diversification of Mariner sequences during the evolutionary history of the group. Furthermore, comparisons between the coleopterans sequences with other insects and mammals, suggest that the horizontal transfer (HT) could have acted in the spreading of the Mariner in diverse non-related animal groups. PMID:24286129

  14. SECOND US/USSR SYMPOSIUM: BIOLOGICAL ASPECTS OF POLLUTANT EFFECTS ON MARINE ORGANISMS HELD AT TERSKOL, USSR ON JUNE 4-9, 1979

    EPA Science Inventory

    This Symposium was conducted under a US/USSR Environmental Agreement, Project 02.06-21 titled 'Effect of Pollutants on Marine Organisms. Papers by American and Soviet specialists present advances in hydrobiological analysis of basic structural components of marine ecosystems and ...

  15. Secondary organic aerosol formation of relevance to the marine boundary layer

    NASA Astrophysics Data System (ADS)

    Cai, Xuyi

    The chlorine atom (Cl) is a potential oxidant of volatile organic compounds (VOCs) in the atmosphere and is hypothesized to lead to secondary organic aerosol (SOA) formation in coastal areas. The purpose of this dissertation is to test this hypothesis and quantify the SOA formation potentials of some representative biogenic and anthropogenic hydrocarbons when oxidized by Cl in laboratory chamber experiments. The chosen model compounds for biogenic and anthropogenic hydrocarbons in this study are three monoterpenes (alpha-pinene, beta-pinene, and d-limonene) and two aromatics (m-xylene and toluene), respectively. Results indicate that the oxidation of these monoterpenes and aromatics generates significant amounts of aerosol. The SOA yields of alpha-pinene, beta-pinene, and d-limonene obtained in this study are comparable to those when they are oxidized by ozone, by nitrate radical, and in photooxidation scenarios. For aerosol mass up to 30.0 mug m-3, their yields reach approximately 0.20, 0.20, and 0.30, respectively. The SOA yields for m-xylene and toluene are found to be in the range of 0.035 to 0.12 for aerosol concentrations up to 19 mug m-3. For d-limonene and toluene, data indicate two yield curves that depend on the initial concentration ratios of Cl precursor to hydrocarbon hydrocarbon. Zero-dimensional calculations based on these yields show that SOA formation from the five model compounds when oxidized by Cl in the marine boundary layer could be a significant source of SOA in the early morning. In addition, the mechanistic reaction pathways for Cl oxidation of alpha-pinene, beta-pinene, d-limonene, and toluene with Cl have been developed within the framework of the Caltech Atmospheric Chemistry Mechanisms (CACM). Output from the developed mechanisms is combined with an absorptive partitioning model to predict precursor decay curves and time-dependent SOA concentrations in experiments. Model calculations are able to match (in general within general +/- 50

  16. Transfer of radionuclides from high polluted bottom sediments to marine organisms through benthic food chain in post Fukushima period

    NASA Astrophysics Data System (ADS)

    Bezhenar, Roman; Jung, Kyung Tae; Maderich, Vladimir; Willemsen, Stefan; de With, Govert; Qiao, Fangli

    2015-04-01

    A catastrophic earthquake and tsunami occurred on March 11, 2011 and severely damaged the Fukushima Daiichi Nuclear Power Plant (FDNPP) that resulted in an uncontrolled release of radioactivity into air and ocean. Around 80% of the radioactivity released due to the FDNPP accident in March-April 2011 was either directly discharged into the ocean or deposited onto the ocean surface from the atmosphere. A large amount of long-lived radionuclides (mainly Cs-137) were released into the environment. The concentration of radionuclides in the ocean reached a maximum in mid-April of 2011, and then gradually decreased. From 2011 the concentration of Cs-137 in water essentially fell except the area around the FDNPP where leaks of contaminated water are continued. However, in the bottom sediment high concentrations of Cs-137 were found in the first months after the accident and slowly decreased with time. Therefore, it should be expected that a time delay is found of sediment-bound radionuclides in marine organisms. For the modeling of radionuclide transfer from highly polluted bottom sediments to marine organisms the dynamical food chain model BURN-POSEIDON (Heling et al, 2002; Maderich et al., 2014) was extended. In this model marine organisms are grouped into a limited number of classes based on their trophic level and type of species. These include: phytoplankton, zooplankton, fishes (two types: piscivorous and non-piscivorous), crustaceans, and molluscs for pelagic food chain and bottom sediment invertebrates, demersal fishes and bottom predators for benthic food chain and whole water column predators feeding by pelagial and benthic fishes. Bottom invertebrates consume organic parts of bottom sediments with adsorbed radionuclides which then migrate through the food chain. All organisms take radionuclides directly from water as well as via food. In fishes where radioactivity is not homogeneously distributed over all tissues of the organism, it is assumed that radionuclide

  17. Occurrence and concentrations of benzotriazole UV stabilizers in marine organisms and sediments from the Ariake Sea, Japan.

    PubMed

    Nakata, Haruhiko; Murata, Sayaka; Filatreau, Julien

    2009-09-15

    The benzotriazole UV stabilizers, which are used in a variety of plastic products, were analyzed in marine organisms and sediments collected from the Ariake Sea, Japan. The UV stabilizers, such as UV-320, UV-326, UV-327, and UV-328 were detected in all of the samples analyzed, suggesting the production and use of these compounds in Japan. High concentrations of UV stabilizers were found in clams, oysters, and gastropods collected from the tidal flat at concentrations on the order of several hundreds of ng/g on a lipid weight (wt.) basis. The higher trophic species, such as hammerhead sharks and coastal birds, accumulated UV stabilizers, with mean concentrations of 190 ng/g and 74 ng/g (lipid wt.), respectively. These results indicate that benzotriazole UV stabilizers are persistent and bioaccumulative in the marine food-chains. The benzotriazole UV stabilizers were also detected in coastal and river sediments around the Ariake Sea, at concentrations in the range of 7.9-720 ng/g (dry weight basis). Significant correlations were found between concentrations of UV stabilizers and organic carbon content in sediments, implying adsorption of these compounds to organic matter. To our knowledge, this is the first report of ubiquitous contamination and bioaccumulation of benzotriazole UV stabilizers in the marine environment. PMID:19806721

  18. Immunoaffinity chromatography purification and ultrahigh performance liquid chromatography tandem mass spectrometry determination of tetrodotoxin in marine organisms.

    PubMed

    Zhang, Xiaojun; Yan, Zhongyong; Wang, Ying; Jiang, Tao; Wang, Jian; Sun, Xiumei; Guo, Yuanming

    2015-04-01

    A highly selective and sensitive method was developed for the determination of tetrodotoxin (TTX) in marine organisms by immunoaffinity chromatography (IAC) purification coupled with ultrahigh performance liquid chromatography tandem mass spectrometry (UPLC-MS/MS). An IAC column was prepared and used to cleanup the extracted samples. The operating conditions of the IAC column were optimized, and the capacity of new IAC column was found to be 1106 ng mL(-1), which was sufficient for TTX determination. The MS/MS conditions and UPLC mobile phase were also studied to optimize the operation conditions. Fortified marine organism samples at levels of 0.3-5.0 ng g(-1) were utilized, and the average recoveries were 86.5-103.6% with intra- and inter-day relative standard deviations less than 7.22 and 9.88%, respectively. The limits of detection and quantification were 0.1 and 0.3 ng g(-1), respectively. The method was later successfully applied for the determination of TTX in 100 marine organism samples collected from local markets. PMID:25756833

  19. Key soil functional properties affected by soil organic matter - evidence from published literature

    NASA Astrophysics Data System (ADS)

    Murphy, Brian

    2015-07-01

    The effect of varying the amount of soil organic matter on a range of individual soil properties was investigated using a literature search of published information largely from Australia, but also included relevant information from overseas. Based on published pedotransfer functions, soil organic matter was shown to increase plant available water by 2 to 3 mm per 10 cm for each 1% increase in soil organic carbon, with the largest increases being associated with sandy soils. Aggregate stability increased with increasing soil organic carbon, with aggregate stability decreasing rapidly when soil organic carbon fell below 1.2 to 1.5 5%. Soil compactibility, friability and soil erodibility were favourably improved by increasing the levels of soil organic carbon. Nutrient cycling was a major function of soil organic matter. Substantial amounts of N, P and S become available to plants when the soil organic matter is mineralised. Soil organic matter also provides a food source for the microorganisms involved in the nutrient cycling of N, P, S and K. In soils with lower clay contents, and less active clays such as kaolinites, soil organic matter can supply a significant amount of the cation exchange capacity and buffering capacity against acidification. Soil organic matter can have a cation exchange capacity of 172 to 297 cmol(+)/kg. As the cation exchange capacity of soil organic matter varies with pH, the effectiveness of soil organic matter to contribute to cation exchange capacity below pH 5.5 is often minimal. Overall soil organic matter has the potential to affect a range of functional soil properties.

  20. Oxygenated hydrocarbon observations in the tropical free troposphere: Field evidence for a missing biogeochemical cycle of marine organic carbon?

    NASA Astrophysics Data System (ADS)

    Volkamer, Rainer; Apel, Eric; Coburn, Sean; Dix, Barbara; Ortega, Ivan; Sinreich, Roman; Baidar, Sunil; Pierce, Brad; Wang, Siyuan

    2014-05-01

    The amount of dissolved organic carbon (DOC) contained in the world's oceans is comparable to that of atmospheric CO2. Yet oceans are currently believed to be a net-receptor for organic carbon that is emitted over land. Organic carbon is relevant in the atmosphere because it influences the reactive chemical removal pathways of climate active gases (i.e., ozone, methane, dimethyl-sulfide), and can modify aerosols (e.g., secondary organic aerosol, SOA). Recent our observations of very short-lived and very water soluble oxygenated hydrocarbons, like glyoxal, in the remote marine boundary layer (MBL) above the Pacific Ocean (Sinreich et al., 2010, ACP) remain as of yet unexplained by atmospheric models. Here we present recent measurements of trace-gases over the Eastern tropical and subtropical Pacific Ocean in the Southern Hemisphere, and show that small oxygenated molecules (glyoxal, methyl ethyl ketone, butanal) from marine sources are widespread over the remote oligotrophic ocean, and also in the free troposphere. The data were collected as part of the Tropical Ocean tRoposphere Exchange experiment TORERO during Jan/Feb 2012 by means of an innovative payload of optical spectroscopic-, mass spectrometric-, and remote sensing instruments aboard the NSF/NCAR GV aircraft (HIAPER), and aboard a NOAA ship. We investigate the source mechanism, present source estimates of the organic carbon flux, and compare it with other sources of organic carbon from marine sources. We also present results from numerical models that suggest a strong impact of these molecules on the oxidative capacity of the tropical free troposphere, where most of tropospheric ozone mass resides, 60-80% of the global methane destruction occurs, and mercury oxidation rates are accelerated at low temperatures.

  1. Acutei and chronic toxicity of nickel to marine organisms: implications for water quality criteria.

    PubMed

    Hunt, John W; Anderson, Brian S; Phillips, Bryn M; Tjeerdema, Ron S; Puckett, H Max; Stephenson, Mark; Tucker, David W; Watson, Daniel

    2002-11-01

    Acute and chronic toxicity tests were conducted to determine the effects of nickel on three U.S. west coast marine species: a fish (the topsmelt, Atherinops affinis), a mollusk (the red abalone, Haliotis rufescens), and a crustacean (the mysid, Mysidopsis intii). The 96-h median lethal concentration (LC50) for topsmelt was 26,560 microg/L, and the chronic value for the most sensitive endpoint in a 40-d exposure was 4,270 microg/L. The median effective concentration (EC50) for 48-h abalone larval development was 145.5 microg/L, and the chronic value for juvenile growth in a 22-d exposure through larval metamorphosis was 26.43 microgAL. The mysid 96-h LC50 was 148.6 microg/L, and the chronic value for the most sensitive endpoint in a 28-d, whole life-cycle exposure was 22.09 microg/L. The abalone and mysid acute values were lower than other values available in the literature. Acute-to-chronic ratios for nickel toxicity to the three species were 6.220, 5.505, and 6.727, respectively, which were similar to the only other available saltwater value of 5.478 (for Americamysis [Mysidopsis] bahia) and significantly lower than the existing values of 35.58 and 29.86 for freshwater organisms. Incorporation of data from the present study into calculations for water quality criteria would lower the criterion maximum concentration and raise the criterion continuous concentration for nickel. PMID:12389922

  2. Volatile organic compounds in northern New England marine and continental environments during the ICARTT 2004 campaign

    NASA Astrophysics Data System (ADS)

    White, M. L.; Russo, R. S.; Zhou, Y.; Mao, H.; Varner, R. K.; Ambrose, J.; Veres, P.; Wingenter, O. W.; Haase, K.; Stutz, J.; Talbot, R.; Sive, B. C.

    2008-04-01

    Volatile organic compound (VOC) measurements were made during the summer 2004 International Consortium for Atmospheric Research on Transport and Transformation (ICARTT) at Thompson Farm (TF), a continental site 25 km from the New Hampshire coast, and Appledore Island (AI), a marine site 10 km off the Maine coast. The 24 h mean total hydroxyl radical (OH) reactivity (±1σ) for the suite of VOCs was 4.15 (±2.64) s-1 at TF and 2.57 (±1.10) s-1 at AI. The larger range of reactivity at TF was dominated by isoprene and the monoterpenes (mean combined reactivity = 2.01 (±2.57) s-1). The impact of local anthropogenic hydrocarbon sources such as liquefied petroleum gas (LPG) leakage and fossil fuel evaporation was evident at both sites. During the campaign, a propane flux of 9 (±2) × 109 molecules cm-2 s-1 was calculated from the linear regression of the mean 0100-0400 local time mixing ratios at TF. This is consistent with fluxes observed in 2003 at sites spread throughout the coastal area of New Hampshire indicating that LPG tank leakage is a major hydrocarbon source throughout the region. Net monoterpene fluxes during ICARTT at TF were 6 (±2), 1.8 (±0.4), 1.2 (±0.6), and 0.4 (±0.5) × 109 molecules cm-2 s-1 for α-pinene, β-pinene, camphene, and limonene, respectively. Comparison to estimated NO3 and O3 loss rates indicate that gross monoterpene emission rates were approximately double the observed net fluxes at TF and comparable to current monoterpene nighttime emission inventory estimates for the northeast.

  3. Organochlorine pesticide contamination in marine organisms of Yantai coast, northern Yellow Sea of China.

    PubMed

    Chen, Jing; Chen, Linlin; Liu, Dongyan; Zhang, Gaosheng

    2014-03-01

    To evaluate the contamination of organochlorine pesticides (OCPs) in marine organisms and their potential health risk on consumers in the northern Yellow Sea of China, mollusks, wild shrimps, and crabs were collected from the Yantai coast, and the OCP contents in the samples were analyzed and compared. The results indicate that all the samples have been contaminated by OCPs, and OCP concentrations varied in individual species and in sampling sites. Among the studied OCPs, ∑HCH and ∑DDT concentrations ranged from 0.91 to 13.92 ng g(-1) and from 10.16 to 411.19 ng g(-1), respectively. Meretrix was highly enriched with HCHs, while the highest DDT concentration was found in Crassostrea. For the OCP isomers, β-HCH was the predominant isomer of HCHs, and p,p'-DDE concentration was much higher than other isomers of DDTs. The concentrations of other OCPs (HCB, t-CHL, endrin, and mirex) were relatively low. For the shrimp and crab samples, Alpheus distinguendus samples accumulated a higher level of HCHs but lower DDTs than Oratosquilla aratoria and Carcinoplax vestitus in all sampling areas. HCHs in the samples of contrast area were not significantly lower than that of the sewage outfall area and port area, whereas DDTs in the samples of contrast area were relatively lower than that of the other two areas. Generally, all the OCP contents in the samples are in the range of the edible hygienic criteria except the total concentration of DDTs in Crassostrea. PMID:24126907

  4. Toward a parameterization of global-scale organic carbon mineralization kinetics in surface marine sediments

    NASA Astrophysics Data System (ADS)

    Stolpovsky, K.; Dale, A. W.; Wallmann, K.

    2015-06-01

    An empirical function is derived for predicting the rate-depth profile of particulate organic carbon (POC) degradation in surface marine sediments including the bioturbated layer. The rate takes the form of a power law analogous to the Middelburg function. The functional parameters were optimized by simulating measured benthic O2 and NO3- fluxes at 185 stations worldwide using a diagenetic model. The novelty of this work rests with the finding that the vertically resolved POC degradation rate in the bioturbated zone can be determined using a simple function where the POC rain rate is the governing variable. Although imperfect, the model is able to fit 71% of paired O2 and NO3- fluxes to within 50% of measured values. It further provides realistic geochemical concentration-depth profiles, NO3- penetration depths, and apparent first-order POC mineralization rate constants. The model performs less well on the continental shelf due to the high sediment heterogeneity there. When applied to globally resolved maps of rain rate, the model predicts a global denitrification rate of 182 ± 88 Tg yr-1 of N and a POC burial rate of 107 ± 52 Tg yr-1 of C with a mean carbon burial efficiency of 6.1%. These results are in very good agreement with published values. Our proposed function is conceptually simple, requires less parameterization than multi-G-type models, and is suitable for nonsteady state applications. It provides a basis for more accurately simulating benthic nutrient fluxes and carbonate dissolution rates in Earth system models.

  5. Does mating behaviour affect connectivity in marine fishes? Comparative population genetics of two protogynous groupers (Family Serranidae).

    PubMed

    Portnoy, D S; Hollenbeck, C M; Renshaw, M A; Cummings, N J; Gold, J R

    2013-01-01

    Pelagic larval duration (PLD) has been hypothesized to be the primary predictor of connectivity in marine fishes; however, few studies have examined the effects that adult reproductive behaviour may have on realized dispersal. We assessed gene flow (connectivity) by documenting variation in microsatellites and mitochondrial DNA sequences in two protogynous species of groupers, the aggregate spawning red hind, Epinephelus guttatus, and the single-male, harem-spawning coney, Cephalopholis fulva, to ask whether reproductive strategy affects connectivity. Samples of both species were obtained from waters off three islands (Puerto Rico, St. Thomas and St. Croix) in the Caribbean Sea. Despite the notion that aggregate spawning of red hind may facilitate larval retention, stronger signals of population structure were detected in the harem-spawning coney. Heterogeneity and/or inferred barriers, based on microsatellites, involved St. Croix (red hind and coney) and the west coast of Puerto Rico (coney). Heterogeneity and/or inferred barriers, based on mitochondrial DNA, involved St. Croix (coney only). Genetic divergence in both species was stronger for microsatellites than for mitochondrial DNA, suggesting sex-biased dispersal in both species. Long-term migration rates, based on microsatellites, indicated asymmetric gene flow for both species in the same direction as mean surface currents in the region. Red hind had higher levels of variation in microsatellites and lower levels of variation in mitochondrial DNA. Long-term effective size and effective number of breeders were greater for red hind; estimates of θ(f) , a proxy for long-term effective female size, were the same in both species. Patterns of gene flow in both species appear to stem in part from shared aspects of larval and adult biology, local bathymetry and surface current patterns. Differences in connectivity and levels of genetic variation between the species, however, likely stem from differences in behaviour

  6. Investigating Passively Floating and Weakly Swimming Organisms: An Activity for Beginning Marine Education Students.

    ERIC Educational Resources Information Center

    Schlenker, Richard M.

    This document presents the outline of a marine biology science unit designed to introduce students to the study and collection of plankton. Extensive details on plankton collections and a seven-item quiz are included. (SL)

  7. ACCUMULATION OF POLYCHLORINATED ORGANIC CONTAMINANTS FROM SEDIMENT BY THREE BENTHIC MARINE SPECIES

    EPA Science Inventory

    A laboratory experiment was conducted to measure the accumulation of selected polychlorinated compounds by marine benthos exposed to environmentally contaminated sediment. andworms (Nereis virens), clams (Macoma nasuta), and grass shrimp (Palaemonetes pugio) were exposed to sedim...

  8. Broad-Spectrum Antimicrobial Epiphytic and Endophytic Fungi from Marine Organisms: Isolation, Bioassay and Taxonomy

    PubMed Central

    Zhang, Yi; Mu, Jun; Feng, Yan; Kang, Yue; Zhang, Jia; Gu, Peng-Juan; Wang, Yu; Ma, Li-Fang; Zhu, Yan-Hua

    2009-01-01

    In the search for new marine derived antibiotics, 43 epi- and endophytic fungal strains were isolated from the surface or the inner tissue of different marine plants and invertebrates. Through preliminary and secondary screening, 10 of them were found to be able to produce broad-spectrum antimicrobial metabolites. By morphological and molecular biological methods, three active strains were characterized to be Penicillium glabrum, Fusarium oxysporum, and Alternaria alternata. PMID:19597575

  9. Sorption interactions of organic compounds with soils affected by agricultural olive mill wastewater.

    PubMed

    Keren, Yonatan; Borisover, Mikhail; Bukhanovsky, Nadezhda

    2015-11-01

    The organic compound-soil interactions may be strongly influenced by changes in soil organic matter (OM) which affects the environmental fate of multiple organic pollutants. The soil OM changes may be caused by land disposal of various OM-containing wastes. One unique type of OM-rich waste is olive mill-related wastewater (OMW) characterized by high levels of OM, the presence of fatty aliphatics and polyphenolic aromatics. The systematic data on effects of the land-applied OMW on organic compound-soil interactions is lacking. Therefore, aqueous sorption of simazine and diuron, two herbicides, was examined in batch experiments onto three soils, including untreated and OMW-affected samples. Typically, the organic compound-soil interactions increased following the prior land application of OMW. This increase is associated with the changes in sorption mechanisms and cannot be attributed solely to the increase in soil organic carbon content. A novel observation is that the OMW application changes the soil-sorbent matrix in such a way that the solute uptake may become cooperative or the existing ability of a soil sorbent to cooperatively sorb organic molecules from water may become characterized by a larger affinity. The remarkable finding of this study was that in some cases a cooperative uptake of organic molecules by soils makes itself evident in distinct sigmoidal sorption isotherms rarely observed in soil sorption of non-ionized organic compounds; the cooperative herbicide-soil interactions may be characterized by the Hill model coefficients. However, no single trend was found for the effect of applied OMW on the mechanisms of organic compound-soil interactions. PMID:26183941

  10. An assessment of persistent organic pollutants in Scottish coastal and offshore marine environments.

    PubMed

    Webster, Lynda; Russell, Marie; Walsham, Pam; Phillips, Lesley A; Hussy, Ines; Packer, Gill; Dalgarno, Eric J; Moffat, Colin F

    2011-05-01

    Concentrations of persistent organic pollutants (POPs), including polycyclic aromatic hydrocarbons (PAHs), polychlorinated biphenyls (PCBs) and polybrominated diphenyl ethers (PBDEs) were determined in sediment and biota (fish liver) from around Scotland. The concentrations were investigated using assessment criteria developed by OSPAR and ICES. Organic contaminant concentrations, PAHs, PCBs and PBDEs in sediment, and PCBs and PBDEs in fish liver, were significantly higher in the Clyde compared to all other sea areas. This is mainly due to historic industrial inputs. Highest PCB and PAH concentrations were found in the strata furthest up the Clyde estuary, with concentrations of POPs in these strata being at levels such that there is an unacceptable risk of chronic effects occurring in marine species. Furthermore, for PAHs in Clyde sediment there was a significant negative gradient going from north to south towards the open sea. PAH and PCB concentrations in sediment and biota in all other Scottish sea areas (except for PCBs in sediment from East Scotland) were unlikely to give rise to pollution effects, being below relevant assessment criteria. Although no assessment criteria are available for PBDEs, the concentrations observed in Scottish sediments were low with all congeners below the limit of detection (LoD; 0.03 µg kg(-1) dry weight) in 140 out of a total of 307 samples analysed. Where PBDEs were detected, the dominant congeners were BDE47 and BDE99. PBDEs were detected in fish livers, although concentrations were less than 150 µg kg(-1) lipid weight in all sea areas except the Clyde where concentrations ranged between 8.9 and 2202 µg kg(-1) lipid weight. Few trends were detected in contaminant concentrations in biota or sediment at any Scottish site with more than five years data. Downward trends were detected in PAHs in sediment from the Clyde, Irish Sea and Minches and Malin Sea and PCBs in fish liver from the Moray Firth. Rules were developed for the

  11. Toxic effects of harmful benthic dinoflagellate Ostreopsis ovata on invertebrate and vertebrate marine organisms.

    PubMed

    Faimali, Marco; Giussani, Valentina; Piazza, Veronica; Garaventa, Francesca; Corrà, Christian; Asnaghi, Valentina; Privitera, Davide; Gallus, Lorenzo; Cattaneo-Vietti, Riccardo; Mangialajo, Luisa; Chiantore, Mariachiara

    2012-05-01

    Harmful benthic microalgae blooms are an emerging phenomenon causing health and economic concern, especially in tourist areas. This is the case of the Mediterranean Sea, where Ostreopsis ovata blooms occur in summer, with increasing regularity. Ostreopsis species produce palytoxin (PTX) and analogues, and a number of deaths directly associated with the ingestion of PTX contaminated seafood have been reported. PTX is considered one of the most toxic molecules occurring in nature and can provoke severe and sometimes lethal intoxications in humans. So far in temperate areas, O. ovata blooms were reported to cause intoxications of humans by inhalation and irritations by contact. In addition, invertebrate mass mortalities have been reported, possibly linked to O. ovata blooms, although other causes cannot be ruled out, such as oxygen depletion or high seawater temperature. In order to improve our knowledge about the direct toxicity of this species on invertebrate and vertebrate marine organisms, we performed an ecotoxicological screening to investigate the toxic effects of different concentrations of O. ovata (cultured in the laboratory and sampled in the field during blooms) on crustaceans and fish as model organisms. Artemia salina, Tigriopus fulvus, and Amphibalanus amphitrite larvae and juveniles of the sea bass Dicentrarchus labrax were used as model species. Toxic effects associated with cultured O. ovata cells were investigated using a crossed design: testing two different temperatures (20 and 25 °C), four different cell concentrations, and four treatments (untreated O. ovata culture, filtered and resuspended algal cells, growth medium devoid of algal cells, and sonicated algal cells). The results indicate that the toxicity of cultured O. ovata is related to the presence of living O. ovata cells, and that this effect is amplified by temperature. Furthermore, both tests with laboratory cultured algae and field sampled cells pointed out that A. salina is the most

  12. Affect and the Brain's Functional Organization: A Resting-State Connectivity Approach

    PubMed Central

    Rohr, Christiane S.; Okon-Singer, Hadas; Craddock, R. Cameron; Villringer, Arno; Margulies, Daniel S.

    2013-01-01

    The question of how affective processing is organized in the brain is still a matter of controversial discussions. Based on previous initial evidence, several suggestions have been put forward regarding the involved brain areas: (a) right-lateralized dominance in emotional processing, (b) hemispheric dominance according to positive or negative valence, (c) one network for all emotional processing and (d) region-specific discrete emotion matching. We examined these hypotheses by investigating intrinsic functional connectivity patterns that covary with results of the Positive and Negative Affective Schedule (PANAS) from 65 participants. This approach has the advantage of being able to test connectivity rather than activation, and not requiring a potentially confounding task. Voxelwise functional connectivity from 200 regions-of-interest covering the whole brain was assessed. Positive and negative affect covaried with functional connectivity involving a shared set of regions, including the medial prefrontal cortex, the anterior cingulate, the visual cortex and the cerebellum. In addition, each affective domain had unique connectivity patterns, and the lateralization index showed a right hemispheric dominance for negative affect. Therefore, our results suggest a predominantly right-hemispheric network with affect-specific elements as the underlying organization of emotional processes. PMID:23935850

  13. Contribution of dissolved organic matter to submicron water-soluble organic aerosols in the marine boundary layer over the eastern equatorial Pacific

    NASA Astrophysics Data System (ADS)

    Miyazaki, Yuzo; Coburn, Sean; Ono, Kaori; Ho, David T.; Pierce, R. Bradley; Kawamura, Kimitaka; Volkamer, Rainer

    2016-06-01

    Stable carbon isotopic compositions of water-soluble organic carbon (WSOC) and organic molecular markers were measured to investigate the relative contributions of the sea surface sources to the water-soluble fraction of submicron organic aerosols collected over the eastern equatorial Pacific during the Tropical Ocean tRoposphere Exchange of Reactive halogens and Oxygenated VOCs (TORERO)/KA-12-01 cruise. On average, the water-soluble organic fraction of the total carbon (TC) mass in submicron aerosols was ˜ 30-35 % in the oceans with the low chlorophyll a (Chl a) concentrations, whereas it was ˜ 60 % in the high-Chl a regions. The average stable carbon isotope ratio of WSOC (δ13CWSOC) was -19.8 ± 2.0 ‰, which was systematically higher than that of TC (δ13CTC) (-21.8 ± 1.4 ‰). We found that in the oceans with both high and low Chl a concentrations the δ13CWSOC was close to the typical values of δ13C for dissolved organic carbon (DOC), ranging from -22 to -20 ‰ in surface seawater of the tropical Pacific Ocean. This suggests an enrichment of marine biological products in WSOC aerosols in the study region regardless of the oceanic area. In particular, enhanced levels of WSOC and biogenic organic marker compounds together with high values of WSOC / TC ( ˜ 60 %) and δ13CWSOC were observed over upwelling areas and phytoplankton blooms, which was attributed to planktonic tissues being more enriched in δ13C. The δ13C analysis estimated that, on average, marine sources contribute ˜ 90 ± 25 % of the aerosol carbon, indicating the predominance of marine-derived carbon in the submicron WSOC. This conclusion is supported by Lagrangian trajectory analysis, which suggests that the majority of the sampling points on the ship had been exposed to marine boundary layer (MBL) air for more than 80 % of the time during the previous 7 days. The combined analysis of the δ13C and monosaccharides, such as glucose and fructose, demonstrated that DOC concentration was

  14. Endogeic earthworms shape bacterial functional communities and affect organic matter mineralization in a tropical soil

    PubMed Central

    Bernard, Laetitia; Chapuis-Lardy, Lydie; Razafimbelo, Tantely; Razafindrakoto, Malalatiana; Pablo, Anne-Laure; Legname, Elvire; Poulain, Julie; Brüls, Thomas; O'Donohue, Michael; Brauman, Alain; Chotte, Jean-Luc; Blanchart, Eric

    2012-01-01

    Priming effect (PE) is defined as a stimulation of the mineralization of soil organic matter (SOM) following a supply of fresh organic matter. This process can have important consequences on the fate of SOM and on the management of residues in agricultural soils, especially in tropical regions where soil fertility is essentially based on the management of organic matter. Earthworms are ecosystem engineers known to affect the dynamics of SOM. Endogeic earthworms ingest large amounts of soil and assimilate a part of organic matter it contains. During gut transit, microorganisms are transported to new substrates and their activity is stimulated by (i) the production of readily assimilable organic matter (mucus) and (ii) the possible presence of fresh organic residues in the ingested soil. The objective of our study was to see (i) whether earthworms impact the PE intensity when a fresh residue is added to a tropical soil and (ii) whether this impact is linked to a stimulation/inhibition of bacterial taxa, and which taxa are affected. A tropical soil from Madagascar was incubated in the laboratory, with a 13C wheat straw residue, in the presence or absence of a peregrine endogeic tropical earthworm, Pontoscolex corethrurus. Emissions of 12CO2 and 13CO2 were followed during 16 days. The coupling between DNA-SIP (stable isotope probing) and pyrosequencing showed that stimulation of both the mineralization of wheat residues and the PE can be linked to the stimulation of several groups especially belonging to the Bacteroidetes phylum. PMID:21753801

  15. Size distributions of organic nitrogen and carbon in remote marine aerosols: Evidence of marine biological origin based on their isotopic ratios

    NASA Astrophysics Data System (ADS)

    Miyazaki, Yuzo; Kawamura, Kimitaka; Sawano, Maki

    2010-03-01

    Size-segregated aerosol samples were collected over the western North Pacific in summer 2008 for the measurements of organic nitrogen (ON) and organic carbon (OC). ON and OC showed bimodal size distributions. Their concentrations showed positive correlation with those of biogenic tracers, methanesulfonic acid (MSA) and azelaic acid (C9). We found that average ON and OC concentrations were twice greater in aerosols collected in the oceanic region with higher biological productivity than in the regions with lower productivity. The average ON/OC ratios are higher (0.49 ± 0.11) in more biologically influenced aerosols than those (0.35 ± 0.10) in less influenced aerosols. Stable carbon isotopic analysis indicates that marine-derived carbon accounted for ˜46-72% of total carbon in more biologically influenced aerosols. These results provide evidence that organic aerosols in this region are enriched in ON that is linked to oceanic biological activity and the subsequent emissions to the atmosphere.

  16. Organic-geochemical investigations on soil layers affected by theTohoku-oki tsunami (March 2011)

    NASA Astrophysics Data System (ADS)

    Reicherter, Klaus; Schwarzbauer, Jan; Jaffe, Bruce; Szczucinski, Witold

    2014-05-01

    Geochemical investigations on tsunami deposits, in particular palaeotsunamites, have mainly focused on inorganic indicators that have been used to distinguish between terrestrial and marine matter in sedimentary archives. Observable tsunami deposits may also be characterised by organic-geochemical parameters reflecting the mixture and unexpected transport of marine and terrestrial matter. The application of organic substances with indicative properties has so far not been used, although the approach of using specific indicators to determine prehistoric, historic and recent processes and impacts (so-called biomarker and anthropogenic marker approach) already exists. In particular, for recent tsunami deposit the analysis of anthropogenic or even xenobiotic compounds as indicators for assessing the impact of tsunamis has been neglected so far. The Tohoku-oki tsunami in March 2011 showed the huge threat that tsunamis, and subsequent flooding of coastal lowlands, pose to society. The mainly sandy deposits of this mega-tsunami reach more than 4.5 km inland as there were run-up heights of ca. 10 m (wave height). The destruction of infrastructure by wave action and flooding is accompanied by the release of environmental pollutants (e.g. fuels, fats, tarmac, plastics, heavy metals, etc.) contaminating the coastal areas and ocean. To characterize this event in the sedimentary deposits, we analyzed several soil archives from the Bay of Sendai area. Soil layers representing the tsunami deposits have been contrasted with unaffected pre-tsunami samples by means of organic-geochemical analyses based on GC/MS. Natural compounds and their diagenetic transformation products have been tested as marker compounds for monitoring this recent tsunami. The relative composition of fatty acids, n-alkanes, sesquiterpenes and further substances pointed to significant variations before and after the tsunami event. Additionally, anthropogenic marker compounds (such as soil derived pesticides

  17. Microbial colonization and degradation of polyethylene and biodegradable plastic bags in temperate fine-grained organic-rich marine sediments.

    PubMed

    Nauendorf, Alice; Krause, Stefan; Bigalke, Nikolaus K; Gorb, Elena V; Gorb, Stanislav N; Haeckel, Matthias; Wahl, Martin; Treude, Tina

    2016-02-15

    To date, the longevity of plastic litter at the sea floor is poorly constrained. The present study compares colonization and biodegradation of plastic bags by aerobic and anaerobic benthic microbes in temperate fine-grained organic-rich marine sediments. Samples of polyethylene and biodegradable plastic carrier bags were incubated in natural oxic and anoxic sediments from Eckernförde Bay (Western Baltic Sea) for 98 days. Analyses included (1) microbial colonization rates on the bags, (2) examination of the surface structure, wettability, and chemistry, and (3) mass loss of the samples during incubation. On average, biodegradable plastic bags were colonized five times higher by aerobic and eight times higher by anaerobic microbes than polyethylene bags. Both types of bags showed no sign of biodegradation during this study. Therefore, marine sediment in temperate coastal zones may represent a long-term sink for plastic litter and also supposedly compostable material. PMID:26790603

  18. Bioaccumulation kinetics and organ distribution of nickel in the marine clam (Protothaca staminea)

    SciTech Connect

    Hardy, J.T.; Roesijadi, G.

    1982-01-01

    Man's activities, primarily fossil fuel combustion, currently introduce about 47 x 10/sup 6/ kg of Ni per year into the world's atmosphere; this rate is expected to increase greatly during the next 20 years. Much of this Ni is associated with sub-micron atmospheric particles. When these particles deposit at the sea surface, about 47% of the associated Ni is released in a soluble form that could enter marine food webs. Ni is normally present in seawater at 0.1 to 2.4 ..mu..g/L and Ni concentrations in marine pelycepods range from 0.05 to 3.2 ..mu..g/g dry wt, depending upon the location of collection. Higher concentrations of Ni in seawater may be toxic to marine life. The 48-h LC/sub 50/ for Ni is 1180 and 310 ..mu..g/L for oyster embryos and hard-shell clam embryos, respectively. Little information exists regarding the ability of marine shellfish to concentrate Ni from seawater. Our studies were undertaken to determine the degree of bioconcentration, kinetics of accumulation, and tissue distribution of Ni in marine clams exposed to seawater enriched with subtoxic levels of Ni.

  19. Dissolved organic matter composition drives the marine production of brominated very short-lived substances.

    PubMed

    Liu, Yina; Thornton, Daniel C O; Bianchi, Thomas S; Arnold, William A; Shields, Michael R; Chen, Jie; Yvon-Lewis, Shari A

    2015-03-17

    Brominated very short-lived substances (BrVSLS), such as bromoform, are important trace gases for stratospheric ozone chemistry. These naturally derived trace gases are formed via bromoperoxidase-mediated halogenation of dissolved organic matter (DOM) in seawater. Information on DOM type in relation to the observed BrVSLS concentrations in seawater, however, is scarce. We examined the sensitivity of BrVSLS production in relation to the presence of specific DOM moieties. A total of 28 model DOM compounds in artificial seawater were treated with vanadium bromoperoxidase (V-BrPO). Our results show a clear dependence of BrVSLS production on DOM type. In general, molecules that comprise a large fraction of the bulk DOM pool did not noticeably affect BrVSLS production. Only specific cell metabolites and humic acid appeared to significantly enhance BrVSLS production. Amino acids and lignin phenols suppressed enzyme-mediated BrVSLS production and may instead have formed halogenated nonvolatile molecules. Dibromomethane production was not observed in any experiments, suggesting it is not produced by the same pathway as the other BrVSLS. Our results suggest that regional differences in DOM composition may explain the observed BrVSLS concentration variability in the global ocean. Ultimately, BrVSLS production and concentrations are likely affected by DOM composition, reactivity, and cycling in the ocean. PMID:25723123

  20. The impact of marine surface organic enrichment on the measured hygroscopicity parameter of laboratory generated sea-spray aerosols

    NASA Astrophysics Data System (ADS)

    Schill, S.; Novak, G.; Zimmermann, K.; Bertram, T. H.

    2014-12-01

    The ocean serves as a major source for atmospheric aerosol particles, yet the chemicophysical properties of sea spray aerosol to date are not well characterized. Understanding the transfer of organic compounds, present in the sea surface microlayer (SSML), to sea-spray particles and their resulting impact on cloud formation is important for predicting aerosol impact on climate in remote marine environments. Here, we present a series of laboratory experiments designed to probe the fractionation of select organic molecules during wave breaking. We use a representative set of organic mimics (e.g. sterols, sugars, lipids, proteins, fatty acids) to test a recent physically based model of organic enrichment in sea-spray aerosol [Burrows et al., 2014] that is based on Langmuir absorption equilibria. Experiments were conducted in the UCSD Marine Aerosol Reference Tank (MART) permitting accurate representation of wave breaking processes in the laboratory. We report kappa values for the resulting sea-spray aerosols and compare them to a predictions made using Kappa-Köhler Theory driven by a linear combination of the pure component kappa values. Hygroscopicity determinations made using the model systems are discussed within the context of measurements of CCN activity made using natural, coastal water.

  1. The mysid Siriella armata as a model organism in marine ecotoxicology: comparative acute toxicity sensitivity with Daphnia magna.

    PubMed

    Pérez, Sara; Beiras, Ricardo

    2010-01-01

    Siriella armata (Crustacea, Mysidacea) is a component of the coastal zooplankton that lives in swarms in the shallow waters of the European neritic zone, from the North Sea to the Mediterranean. Juveniles of this species were examined as standard test organisms for use in marine acute toxicity tests. The effects of reference toxicants, three trace metals (Copper, Cadmium and Zinc), and one surfactant, sodium dodecyl sulfate (SDS) were studied on S. armata neonates (\\24 h) reared in the laboratory. Acute toxicity tests were carried out with filtered sea water on individual chambers (microplate wells for metals or glass vials for SDS) incubated in an isothermal room at 20 degrees C, with 16 h light: 8 h dark photoperiod for 96 h. Each neonate was fed daily with 10-15 nauplii of Artemia salina. Acute (96 h) LC50 values, in increasing order, were 46.9 lg/L for Cu, 99.3 lg/L for Cd, 466.7 lg/L for Zn and 8.5 mg/L for SDS. The LC(10), NOEC and LOEC values were also calculated. Results were compared with Daphnia magna, a freshwater cladoceran widely used as a standard ecotoxicological test organism. Acute (48 h) LC(50) values were 56.2 lg/L for Cu, 571.5 lg/L for Cd, 1.3 mg/L for Zn and 27.3 mg/L for SDS. For all the reference toxicants studied, the marine mysid Siriella armata showed higher sensitivity than the freshwater model organism Daphnia magna, validating the use of Siriella mysids as model organisms in marine acute toxicity tests. PMID:19757032

  2. [Residues and risk assessment of polycyclic aromatic hydrocarbons in the surface sediments and marine organisms from Dapeng Bay, Shenzhen].

    PubMed

    Sun, Run-Xia; Ke, Chang-Liang; Gu, Yang-Guang; Lu, Teng-Teng; Du, Fei-Yan; Ma, Sheng-Wei; Lin, Qin

    2013-10-01

    In order to assess contamination by polycyclic aromatic hydrocarbons (PAHs), surface sediments and marine organism samples of fish, shrimp and shellfish were collected from the Dapeng Bay, Shenzhen in October 2011. Concentrations fof sixteen priority PAHs were determined by gas chromatography and mass spectrometry (GC-MS). The total concentrations of PAHs (Sigma PAHs ) ranged from 216. 56 ng.g-1 to 1 314. 92 ng.g-1 dry weight in sediment samples and from 70. 88 ng.g-1 to 251.90 ng.g-1 wet weight in biological samples, respectively. The mean concentration was the highest in fish (171.52 ng.g-1 ), followed by mussel (134.75 ng.g-1) and shrimp (123.35 ng.g-1) in the studied marine organisms. Compared with those in other water bodies around the world, PAHs pollution in the studied area was at medium level. The dominant fraction in the surface sediments was the 4-ring PAHs. Identification of PAH sources suggested that PAHs in Dapeng Bay were likely originated from both pyrolytic and petrogenic sources. The most abundant PAHs were 3-ring PAHs in the tissues of organisms, which may be governed by their feeding behaviors, habitats, and bioavailability of PAHs. Ecological risk assessment indicated that PAHs in surface sediments might have adverse impacts on local ecosystem. Health risk analysis revealed that the potency equivalent concentrations of BaP to the total PAHs in marine organisms from Dapeng Bay were relatively high and may cause some concerns on human health by consumption. PMID:24364300

  3. Phenotypic plasticity or speciation? A case from a clonal marine organism

    PubMed Central

    2008-01-01

    Background Clonal marine organisms exhibit high levels of morphological variation. Morphological differences may be a response to environmental factors but also they can be attributed to accumulated genetic differences due to disruption of gene flow among populations. In this study, we examined the extensive morphological variation (of 14 characters) in natural populations observed in the gorgonian Eunicea flexuosa, a widely distributed Caribbean octocoral. Eco-phenotypic and genetic effects were evaluated by reciprocal transplants of colonies inhabiting opposite ends of the depth gradient and analysis of population genetics of mitochondrial and nuclear genes, respectively. Results Significant differences (P < 0.001) in 14 morphological traits were found among colonies inhabiting 12 locations distributed in seven reefs in southwest Puerto Rico. Results from principal component analysis indicated the presence of two groups based on depth distribution, suggesting the presence of two discrete morphotypes (i.e. shallow type < 5 m and deep type > 17 m). A discriminant function analysis based on a priori univariate and multivariate analyses (which separated the colonies in morphotypes) correctly classified 93% of the colonies for each environment. Light, water motion and sediment transport might influence the distribution of the two morphotypes. Reaction norms of morphological characters of colonies reciprocally transplanted showed gradual significant changes through the 15 months of transplantation. Sclerites of shallow water colonies became larger when transplanted to deeper environments and vice versa, but neither of the two transplanted groups overlapped with the residents' morphology. Genetic analysis of mitochondrial and nuclear genes suggested that such discrete morphology and non-overlapping phenotypic plasticity is correlated with the presence of two independent evolutionary lineages. The distribution of the lineages is non-random and may be related to

  4. Novel, resistant microalgal polyethers: An important sink of organic carbon in the marine environment?

    SciTech Connect

    Gelin, F.; Boogers, I.; Noordeloos, A.A.M.

    1996-04-01

    Five out of seven marine microalgal species investigated were found to biosynthesize nonhydrolysable, mainly aliphatic, biomacromolecules (algaenans). The molecular structure of the algaenan isolated from the microalga Nannochloropsis salina of the class Eustigmatophyceae was determined by solid state {sup 13}C NMR spectroscopy, Curie point pyrolysis-gas chromatography-mass spectrometry, and chemical degradations with HI and RuO{sub 4}. The structure is predominantly composed of C{sub 28}-C{sub 34} linear chins linked by ether bridges. The algaenan isolated from a second eustigmatophyte (Nannochloropsis sp.) was structurally similar. Algaenans isolated from two chlorophytes also possess a strongly aliphatic nature, as revealed by the dominance of alkenes/alkanes in their pyrolysates. Accordingly, we proposed that the aliphatic character of numerous Recent and ancient marine kerogens reflects selectively preserved algaenans and that these algaenans may act as a source of n-alkanes in marine crude oils.

  5. Novel, resistant microalgal polyethers: An important sink of organic carbon in the marine environment?

    NASA Astrophysics Data System (ADS)

    Gelin, F.; Boogers, I.; Noordeloos, A. A. M.; Damsté, J. S. Sinninghe; Hatcher, P. G.; Leeuw, J. W. de

    1996-04-01

    Five out of seven marine microalgal species investigated were found to biosynthesize nonhydrolysable, mainly aliphatic, biomacromolecules (algaenans). The molecular structure of the algaenan isolated from the microalga Nannochloropsis salina of the class Eustigmatophyceae was determined by solid state 13C NMR spectroscopy, Curie point pyrolysis-gas chromatography-mass spectrometry, and chemical degradations with HI and RuO 4. The structure is predominantly composed of C 28-C 34 linear chains linked by ether bridges. The algaenan isolated from a second eustigmatophyte ( Nannochloropsis sp.) was structurally similar. Algaenans isolated from two chlorophytes also possess a strongly aliphatic nature, as revealed by the dominance of alkenes/alkanes in their pyrolysates. Accordingly, we propose that the aliphatic character of numerous Recent and ancient marine kerogens reflects selectively preserved algaenans and that these algaenans may act as a source of n-alkanes in marine crude oils.

  6. Geochemical imprint of depositional conditions on organic matter in laminated-Bioturbated interbeds from fine-grained marine sequences

    USGS Publications Warehouse

    Pratt, L.M.; Claypool, G.E.; King, J.D.

    1986-01-01

    Laminated organic-rich shales are interbedded at a scale of centimeters to a few meters with bioturbated organic-poor mudstones or limestones in some fine-grained marine sequences. We have analyzed the organic matter in pairs of laminated/bioturbated interbeds from Cretaceous and Devonian rocks deposited in epicontinental and oceanic settings for the purpose of studying the influence of depositional and early diagenetic environment on the organic geochemical properties of marine shales. Results of these analyses indicate that for rocks that are still in a diagenetic stage of thermal alteration, the relative abundance of biomarker compounds and specific biomarker indices can be useful indicators of depositional and early diagenetic conditions. Pristane/phytane ratios are generally highest for laminated rocks from epicontinental basins and appear to reflect the input of isoprenoid precursors more than oxygenated versus anoxic depositional conditions. The thermally immature laminated rocks are characterized by relatively high contents of 17??(H), 21??(H)-hopanes, hopenes, sterenes and diasterenes, and by strong predominance of the 22R over 22S homohopane isomers. Thermally immature bioturbated samples are characterized by absence of the ??,??-hopanes, by low contents of both saturated and unsaturated polycyclic hydrocarbons, and by slight or no predominance of the 22R over 22S homohopane isomers. There are less obvious compositional differences between the saturated hydrocarbons in the laminated and bioturbated units from the thermally mature sequences. For both the thermally mature and immature laminated samples, the degree of isomerization at the 22C position for hopanes and at the 20C position for steranes is generally consistent with the degree of thermal maturity interpreted from other properties of the organic matter. The bioturbated samples, however, exhibit inconsistent and anomalously high degrees of isomerization for the homohopanes, resulting either from

  7. The Marine Actinomycete Genus Salinispora: A Model Organism for Secondary Metabolite Discovery

    PubMed Central

    Jensen, Paul R.; Moore, Bradley S.; Fenical, William

    2015-01-01

    This review covers the initial discovery of the marine actinomycete genus Salinispora through its development as a model for natural product research. A focus is placed on the novel chemical structures reported with reference to their biological activities and the synthetic and biosynthetic studies they have inspired. The time line of discoveries progresses from more traditional bioassay-guided approaches through the application of genome mining and genetic engineering techniques that target the products of specific biosynthetic gene clusters. This overview exemplifies the extraordinary biosynthetic diversity that can emanate from a narrowly defined genus and supports future efforts to explore marine taxa in the search for novel natural products. PMID:25730728

  8. Changes in the adsorption of bisphenol A, 17 α-ethinyl estradiol, and phenanthrene on marine sediment in Hong Kong in relation to the simulated sediment organic matter decomposition.

    PubMed

    Fei, Ying-heng; Xing, Baoshan; Li, Xiao-yan

    2014-09-01

    Marine sediment with an input of particulate organic matter was incubated to simulate the early aging process. On the sediment after various incubation periods, adsorption and desorption tests were conducted for three selected organic micropollutants: bisphenol A (BPA), 17α-ethinyl estradiol (EE2), and phenanthrene (Phe). The results showed significant sediment organic matter (SOM) decomposition during the incubation, and the SOM decay and transformation had a profound impact on the adsorption of organic compounds by the sediment. An increasing-delay-increasing pattern of change was observed for the SOM normalized partition coefficients of EE2 and Phe. This change was accordant to the transformation of SOM from labile organics into active biomass and its microbial products, and finally into more condensed and humic-like substances. Comparison between the 3 model micropollutants indicates that the chemical adsorption behaviors were mostly affected by their hydrophobic properties. PMID:24929636

  9. Biochemical resistance of pyrogenic organic matter in fire-affected mineral soils of Southern Europe

    NASA Astrophysics Data System (ADS)

    Knicker, H.; González Vila, F. J.; Clemente Salas, L.

    2012-04-01

    Incorporated into the soil, naturally formed pyrogenic organic matter (PyOM) is considered as highly recalcitrant, but direct estimation of PyOM decomposition rates are scarce. With this aim in mind, we subjected organic matter (OM) of fire-affected and unaffected soils to biochemical degradation under laboratory conditions and monitored CO2 production over a period of seven months. The soils derived from fire affected and unaffected areas of the Sierra de Aznalcóllar and the Doñana National Park, Southern Spain. Virtual fractionation of the solid-state 13C nuclear magnetic resonance (NMR) spectra of the fire affected soils into fire-unaffected soil organic matter (SOM) and PyOM yielded charcoal C contributions of 30 to 50% to the total organic C (Corg) of the sample derived from the Aznalcóllar region. Fitting the respiration data with a double exponential decay model revealed a fast carbon flush during the first three weeks of the experiment. Solid-state 13C NMR spectroscopy evidenced the contribution of aromatic moieties of the PyOM to this initial carbon release and to the biosynthesis of new microbial biomass. The input of PyOM resulted in an increase of the mean residence time (MRT) of the slow OM pool of the soil by a factor of 3 to 4 to approximately 40 years which rises doubts rises doubts about the presumed big influence of PyOM as an additional C-sink in soils. On the other hand, although being small the difference in turnover rates is evident and has some major implication with respect to long-term alteration of the chemical composition of OM in fire-affected soils. Based on the obtained results and the analysis of PyOM in other soil systems, a conceptual model is presented which can explain the different behavior of PyOM under different soil conditions.

  10. Watershed-Marine Linkages: Monitoring how Terrigenous Runoff and Wave-Induced Resuspension Affect Marine Sediment Dynamics in Bays with Coral Reefs, St. John, USVI

    NASA Astrophysics Data System (ADS)

    Campbell, S.; Gray, S. C.; Whinney, J.; Ramos-Scharron, C. E.; Campbell, S.; LaFevor, M. C.

    2015-12-01

    In the USVI, land-based sedimentation in coastal marine environments has increased due to watershed development and is a major cause of coral reef degradation. Watershed runoff and wave/current-induced resuspension of benthic sediment contribute to turbidity/sedimentation. Our objectives are to characterize the spatial and temporal variability of marine sediment dynamics in response to runoff and resuspension in shoreline and reef areas of St. John, USVI, and directly compare the efficacy of time-integrated vs. high-resolution sediment monitoring approaches. To complement a six-year sediment trap study of sedimentation, nephelometers (10-min resolution) were deployed alongside sediment traps (26 day resolution) at four ephemeral stream outfalls and three reefs sites below comparable developed and minimally developed catchments. Watershed runoff was monitored using stream (10-min resolution) and peak crest (2-week resolution) gauges. Mean turbidity/deposition were 4/5 times greater at shore compared to reef sites, 5/6 times greater below developed compared to minimally developed catchments, 2/4 times greater during runoff compared to non-runoff periods, and 100/500 times background levels (time series median) following the largest runoff event of the 5-month time series. Turbidity values due to resuspension during non-runoff periods were primarily controlled by wave height (71% of the variability), tides, and the presence of finer sediment grains. However, the relative contribution to total sedimentation of resuspension vs. watershed runoff varied spatially between sites due to variations in bay geography, benthic sediment grain size, and catchment characteristics. Sediment traps and nephelometers recorded generally consistent temporal patterns of sedimentation at most sites. Though our study confirmed that watershed development increases turbidity and deposition in bays with coral reefs, multiple processes govern sediment dynamics and the distribution of sediments

  11. 76 FR 58288 - International Maritime Organization Guidelines for Exhaust Gas Cleaning Systems for Marine...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-09-20

    ... Federal Register (73 FR 3316). Information on Services for Individuals with Disabilities For information... effective in reducing sulfur oxide emissions as the requirements of MARPOL Annex VI regulation 14. DATES... systems for marine engines to remove sulfur oxide emissions. Annex VI regulation 4 of the...

  12. UTILITY OF TOXICITY TESTS TO MEASURE EFFECTS OF SUBSTANCES ON MARINE ORGANISMS

    EPA Science Inventory

    Toxicity tests using single species, microcosms, and communities of test species are described for laboratory evaluations of marine (estuarine and oceanic) pollution effects. The design of acute, early life-stage, life-cycle, and community toxicity tests is discussed. Uses of tes...

  13. Thermal alteration of organic matter in recent marine sediments. 2: Isoprenoids. [Tanner Basin off Southern California

    NASA Technical Reports Server (NTRS)

    Ikan, R.; Baedecker, M. J.; Kaplan, I. R.

    1974-01-01

    A series of isoprenoid compounds were isolated from a heat treated marine sediment (from Tanner Basin) which were not present in the original sediment. Among the compounds identified were: phytol, dihydrophytol, c-18-isoprenoid ketone, phytanic and pristanic acids, c-19 and c-20-monoolefines, and the alkanes pristane and phytane. The significance and possible routes leading to these compounds is discussed.

  14. Total Synthesis and Structure-Activity Relationship of Glycoglycerolipids from Marine Organisms

    PubMed Central

    Zhang, Jun; Li, Chunxia; Yu, Guangli; Guan, Huashi

    2014-01-01

    Glycoglycerolipids occur widely in natural products, especially in the marine species. Glycoglycerolipids have been shown to possess a variety of bioactivities. This paper will review the different methodologies and strategies for the synthesis of biological glycoglycerolipids and their analogs for bioactivity assay. In addition, the bioactivities and structure-activity relationship of the glycoglycerolipids are also briefly outlined. PMID:24945415

  15. 40 CFR Table 2 to Subpart II of... - Volatile Organic HAP (VOHAP) Limits for Marine Coatings

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ...) Limits for Marine Coatings Coating category VOHAP limits a,b,c Grams/liter coating (minus water and... water or exempt compounds and that the volumes of all components within a coating are additive. e These limits apply during cold-weather time periods, as defined in § 63.782. Cold-weather allowances are...

  16. 40 CFR Table 2 to Subpart II of... - Volatile Organic HAP (VOHAP) Limits for Marine Coatings

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ...) Limits for Marine Coatings Coating category VOHAP limits a,b,c Grams/liter coating (minus water and... 1,069 High-temperature 500 1,237 1,597 Inorganic zinc high-build 340 571 728 Military exterior 340... water or exempt compounds and that the volumes of all components within a coating are additive. e...

  17. ORGANOTIN TOXICITY STUDIES CONDUCTED WITH SELECTED MARINE ORGANISMS AT EPA'S ENVIRONMENTAL RESEARCH LABORATORY, GULF BREEZE, FLORIDA

    EPA Science Inventory

    Studies on effect of bis(tri-n-butyltin)oxide (TBTO) and other organotins on marine species have been conducted at the U.S. Environmental Protection Agency's laboratory at Gulf Breeze, Florida, since 1983. First studies were done on two species of algae, Skeletonema costatum and ...

  18. Thinking Big or Small: Does Mental Abstraction Affect Social Network Organization?

    PubMed

    Bacev-Giles, Chantal; Peetz, Johanna

    2016-01-01

    Four studies examined how mental abstraction affects how people perceive their relationships with other people, specifically, how these relationships may be categorized in social groups. We expected that individuals induced to think abstractly would report fewer more global social groups, compared to those induced to think concretely, who would report more specific groups. However, induced abstract mindset did not affect how people structured their social groups (Study 2-4), despite evidence that the mindset manipulation changed the level of abstraction in their thoughts (Study 3) and evidence that it changed how people structured groups for a control condition (household objects, Study 4). Together, these studies suggest that while the way people organize their relationships into groups is malleable; cognitive abstraction does not seem to affect how people categorize their relationships into social groups. PMID:26808086

  19. Thinking Big or Small: Does Mental Abstraction Affect Social Network Organization?

    PubMed Central

    Bacev-Giles, Chantal; Peetz, Johanna

    2016-01-01

    Four studies examined how mental abstraction affects how people perceive their relationships with other people, specifically, how these relationships may be categorized in social groups. We expected that individuals induced to think abstractly would report fewer more global social groups, compared to those induced to think concretely, who would report more specific groups. However, induced abstract mindset did not affect how people structured their social groups (Study 2–4), despite evidence that the mindset manipulation changed the level of abstraction in their thoughts (Study 3) and evidence that it changed how people structured groups for a control condition (household objects, Study 4). Together, these studies suggest that while the way people organize their relationships into groups is malleable; cognitive abstraction does not seem to affect how people categorize their relationships into social groups. PMID:26808086

  20. Soil organic matter transformation in cryoturbated horizons of permafrost affected soils

    NASA Astrophysics Data System (ADS)

    Capek, Petr; Diakova, Katerina; Dickopp, Jan-Erik; Barta, Jiri; Santruckova, Hana; Wild, Birgit; Schnecker, Joerg; Guggenberg, Georg; Gentsch, Norman; Hugelius, Gustaf; Kuhry, Peter; Lashchinsky, Nikolaj; Gittel, Antje; Schleper, Christa; Mikutta, Robert; Palmtag, Juri; Shibistova, Olga; Urich, Tim; Zimov, Sergey; Richter, Andreas

    2014-05-01

    Cryoturbated soil horizons are special feature of permafrost affected soils. These soils are known to store great amount of organic carbon and cryoturbation undoubtedly contribute to it to large extent. Despite this fact there is almost no information about soil organic matter (SOM) transformation in cryoturbated horizons. Therefore we carried out long term incubation experiment in which we inspect SOM transformation in cryoturbated as well as in organic and mineral soil horizons under different temperature and redox regimes as potential drivers. We found out that lower SOM transformation in cryoturbated horizons compared to organic horizons was mainly limited by the amount of microbial biomass, which is extremely low in absolute numbers or expressed to SOM concentration. The biochemical transformation ensured by extracellular enzymes is relatively high leading to high concentrations of dissolved organic carbon in cryoturbated horizons. Nevertheless the final step of SOM transformation leading to C mineralization to CO2 or CH4 seems to be restricted by low microbial biomass. Critical step of biochemical transformation of complex SOM is dominated by phenoloxidases, which break down complex organic compounds to simple ones. Their oxygen consumption greatly overwhelms oxygen consumption of the whole microbial community. However the phenoloxidase activity shows strong temperature response with optimum at 13.7° C. Therefore we suggest that apparent SOM stability in cryoturbated horizons, which is expressed in old C14 dated age, is caused by low amount of microbial biomass and restricted diffusion of oxygen to extracellular enzymes in field.

  1. Ethanol exposure affects gene expression in the embryonic organizer and reduces retinoic acid levels.

    PubMed

    Yelin, Ronit; Schyr, Racheli Ben-Haroush; Kot, Hadas; Zins, Sharon; Frumkin, Ayala; Pillemer, Graciela; Fainsod, Abraham

    2005-03-01

    Fetal Alcohol Spectrum Disorder (FASD) is a set of developmental malformations caused by alcohol consumption during pregnancy. Fetal Alcohol Syndrome (FAS), the strongest manifestation of FASD, results in short stature, microcephally and facial dysmorphogenesis including microphthalmia. Using Xenopus embryos as a model developmental system, we show that ethanol exposure recapitulates many aspects of FAS, including a shortened rostro-caudal axis, microcephally and microphthalmia. Temporal analysis revealed that Xenopus embryos are most sensitive to ethanol exposure between late blastula and early/mid gastrula stages. This window of sensitivity overlaps with the formation and early function of the embryonic organizer, Spemann's organizer. Molecular analysis revealed that ethanol exposure of embryos induces changes in the domains and levels of organizer-specific gene expression, identifying Spemann's organizer as an early target of ethanol. Ethanol also induces a defect in convergent extension movements that delays gastrulation movements and may affect the overall length. We show that mechanistically, ethanol is antagonistic to retinol (Vitamin A) and retinal conversion to retinoic acid, and that the organizer is active in retinoic acid signaling during early gastrulation. The model suggests that FASD is induced in part by an ethanol-dependent reduction in retinoic acid levels that are necessary for the normal function of Spemann's organizer. PMID:15708568

  2. Distribution and Functions of TonB-Dependent Transporters in Marine Bacteria and Environments: Implications for Dissolved Organic Matter Utilization

    PubMed Central

    Tang, Kai; Jiao, Nianzhi; Liu, Keshao; Zhang, Yao; Li, Shuhui

    2012-01-01

    Background Bacteria play critical roles in marine nutrient cycles by incorporating and redistributing dissolved organic matter (DOM) and inorganic nutrients in the ocean. TonB-dependent transporter (TBDT) proteins allow Gram-negative bacteria to take up scarce resources from nutrient-limiting environments as well as siderophores, heme, vitamin B12, and recently identified carbohydrates. Thus, the characterization of TBDT distribution and functions is essential to better understand the contribution TBDT to DOM assimilation and its consequences on nutrient cycling in the environment. Methodology/Principal Findings This study presents the distribution of encoded known and putative TBDT proteins in the genomes of microorganisms and from the Global Ocean Survey data. Using a Lek clustering algorithm and substrate specificities, the TBDT sequences were mainly classified into the following three groups: (1) DOM transporters; (2) Siderophores/Vitamins transporters; and (3) Heme/Hemophores/Iron(heme)-binding protein transporters. Diverse TBDTs were found in the genomes of oligotroph Citromicrobium bathyomarinum JL354 and Citromicrobium sp JLT1363 and were highly expressed in the stationary phase of bacterial growth. The results show that the Gammaproteobacteria and the Cytophaga-Flavobacterium-Bacteroides (CFB) group bacteria accounted for the majority of the TBDT gene pool in marine surface waters. Conclusions/Significance The results of this study confirm the ecological importance of TBDTs in DOM assimilation for bacteria in marine environments owing to a wide range of substrate utilization potential in the ubiquitous Gammaproteobacteria and CFB group bacteria. PMID:22829928

  3. Effects of Surface-Engineered Nanoparticle-Based Dispersants for Marine Oil Spills on the Model Organism Artemia franciscana

    PubMed Central

    2015-01-01

    Fine particles are under active consideration as alternatives to chemical dispersants for large-scale petroleum spills. Fine carbon particles with engineered surface chemistry have been shown to stabilize oil-in-water emulsions, but the environmental impacts of large-scale particle introduction to the marine environment are unknown. Here we study the impact of surface-engineered carbon-black materials on brine shrimp (Artemia franciscana) as a model marine microcrustacean. Mortality was characterized at 50–1000 mg/L, and levels of heat shock protein 70 (hsp70) were characterized at sublethal particle concentrations (25–50 mg/L). Functionalized carbon black (CB) nanoparticles were found to be nontoxic at all concentrations, while hydrophobic (annealed) and as-produced CB induced adverse effects at high concentrations. CB was also shown to adsorb benzene, a model hydrocarbon representing the more soluble and toxic low-molecular weight aromatic fraction of petroleum, but the extent of adsorption was insufficient to mitigate benzene toxicity to Artemia in coexposure experiments. At lower benzene concentrations (25–75 mg/L), coexposure with annealed and as-produced CB increased hsp70 protein levels. This study suggests that surface functionalization for increased hydrophilicity can not only improve the performance of CB-based dispersants but also reduce their adverse environmental impacts on marine organisms. PMID:24823274

  4. Effects of surface-engineered nanoparticle-based dispersants for marine oil spills on the model organism Artemia franciscana.

    PubMed

    Rodd, April L; Creighton, Megan A; Vaslet, Charles A; Rangel-Mendez, J Rene; Hurt, Robert H; Kane, Agnes B

    2014-06-01

    Fine particles are under active consideration as alternatives to chemical dispersants for large-scale petroleum spills. Fine carbon particles with engineered surface chemistry have been shown to stabilize oil-in-water emulsions, but the environmental impacts of large-scale particle introduction to the marine environment are unknown. Here we study the impact of surface-engineered carbon-black materials on brine shrimp (Artemia franciscana) as a model marine microcrustacean. Mortality was characterized at 50-1000 mg/L, and levels of heat shock protein 70 (hsp70) were characterized at sublethal particle concentrations (25-50 mg/L). Functionalized carbon black (CB) nanoparticles were found to be nontoxic at all concentrations, while hydrophobic (annealed) and as-produced CB induced adverse effects at high concentrations. CB was also shown to adsorb benzene, a model hydrocarbon representing the more soluble and toxic low-molecular weight aromatic fraction of petroleum, but the extent of adsorption was insufficient to mitigate benzene toxicity to Artemia in coexposure experiments. At lower benzene concentrations (25-75 mg/L), coexposure with annealed and as-produced CB increased hsp70 protein levels. This study suggests that surface functionalization for increased hydrophilicity can not only improve the performance of CB-based dispersants but also reduce their adverse environmental impacts on marine organisms. PMID:24823274

  5. Methods for measuring the acute toxicity of effluents and receiving waters to freshwater and marine organisms (fourth edition)

    SciTech Connect

    Weber, C.I.

    1991-09-01

    The manual describes methods for measuring the acute toxicity of effluents and receiving waters to freshwater, estuarine, and marine macroinvertebrates and fish. The methods include single and multiple concentration static nonrenewal, static-renewal, and flow-through toxicity tests for effluents and receiving waters. Also included are guidelines on laboratory safety; quality assurance; facilities and equipment; test species selection and handling; dilution water; effluent and receiving water sample collection, preservation, shipping, and holding; test conditions; toxicity test data analysis; report preparation; and organism culturing.

  6. Characterisation of algal organic matter produced by bloom-forming marine and freshwater algae.

    PubMed

    Villacorte, L O; Ekowati, Y; Neu, T R; Kleijn, J M; Winters, H; Amy, G; Schippers, J C; Kennedy, M D

    2015-04-15

    Algal blooms can seriously affect the operation of water treatment processes including low pressure (micro- and ultra-filtration) and high pressure (nanofiltration and reverse osmosis) membranes mainly due to accumulation of algal-derived organic matter (AOM). In this study, the different components of AOM extracted from three common species of bloom-forming algae (Alexandrium tamarense, Chaetoceros affinis and Microcystis sp.) were characterised employing various analytical techniques, such as liquid chromatography - organic carbon detection, fluorescence spectroscopy, fourier transform infrared spectroscopy, alcian blue staining and lectin staining coupled with laser scanning microscopy to indentify its composition and force measurement using atomic force microscopy to measure its stickiness. Batch culture monitoring of the three algal species illustrated varying characteristics in terms of growth pattern, cell concentration and AOM release. The AOM produced by the three algal species comprised mainly biopolymers (e.g., polysaccharides and proteins) but some refractory compounds (e.g., humic-like substances) and other low molecular weight acid and neutral compounds were also found. Biopolymers containing fucose and sulphated functional groups were found in all AOM samples while the presence of other functional groups varied between different species. A large majority (>80%) of the acidic polysaccharide components (in terms of transparent exopolymer particles) were found in the colloidal size range (<0.4 μm). The relative stickiness of AOM substantially varied between algal species and that the cohesion between AOM-coated surfaces was much stronger than the adhesion of AOM on AOM-free surfaces. Overall, the composition as well as the physico-chemical characteristics (e.g., stickiness) of AOM will likely dictate the severity of fouling in membrane systems during algal blooms. PMID:25682049

  7. Effect of Terrestrial and Marine Organic Aerosol on Regional and Global Climate: Model Development, Application, and Verification with Satellite Data

    SciTech Connect

    Meskhidze, Nicholas; Zhang, Yang; Kamykowski, Daniel

    2012-03-28

    In this DOE project the improvements to parameterization of marine primary organic matter (POM) emissions, hygroscopic properties of marine POM, marine isoprene derived secondary organic aerosol (SOA) emissions, surfactant effects, new cloud droplet activation parameterization have been implemented into Community Atmosphere Model (CAM 5.0), with a seven mode aerosol module from the Pacific Northwest National Laboratory (PNNL)'s Modal Aerosol Model (MAM7). The effects of marine aerosols derived from sea spray and ocean emitted biogenic volatile organic compounds (BVOCs) on microphysical properties of clouds were explored by conducting 10 year CAM5.0-MAM7 model simulations at a grid resolution 1.9° by 2.5° with 30 vertical layers. Model-predicted relationship between ocean physical and biological systems and the abundance of CCN in remote marine atmosphere was compared to data from the A-Train satellites (MODIS, CALIPSO, AMSR-E). Model simulations show that on average, primary and secondary organic aerosol emissions from the ocean can yield up to 20% increase in Cloud Condensation Nuclei (CCN) at 0.2% Supersaturation, and up to 5% increases in droplet number concentration of global maritime shallow clouds. Marine organics were treated as internally or externally mixed with sea salt. Changes associated with cloud properties reduced (absolute value) the model-predicted short wave cloud forcing from -1.35 Wm-2 to -0.25 Wm-2. By using different emission scenarios, and droplet activation parameterizations, this study suggests that addition of marine primary aerosols and biologically generated reactive gases makes an important difference in radiative forcing assessments. All baseline and sensitivity simulations for 2001 and 2050 using global-through-urban WRF/Chem (GU-WRF) were completed. The main objective of these simulations was to evaluate the capability of GU-WRF for an accurate representation of the global atmosphere by exploring the most accurate configuration of

  8. Soil Organic Carbon Pools and Stocks in Permafrost-Affected Soils on the Tibetan Plateau

    PubMed Central

    Dörfer, Corina; Kühn, Peter; Baumann, Frank; He, Jin-Sheng; Scholten, Thomas

    2013-01-01

    The Tibetan Plateau reacts particularly sensitively to possible effects of climate change. Approximately two thirds of the total area is affected by permafrost. To get a better understanding of the role of permafrost on soil organic carbon pools and stocks, investigations were carried out including both discontinuous (site Huashixia, HUA) and continuous permafrost (site Wudaoliang, WUD). Three organic carbon fractions were isolated using density separation combined with ultrasonic dispersion: the light fractions (<1.6 g cm−3) of free particulate organic matter (FPOM) and occluded particulate organic matter (OPOM), plus a heavy fraction (>1.6 g cm−3) of mineral associated organic matter (MOM). The fractions were analyzed for C, N, and their portion of organic C. FPOM contained an average SOC content of 252 g kg−1. Higher SOC contents (320 g kg−1) were found in OPOM while MOM had the lowest SOC contents (29 g kg−1). Due to their lower density the easily decomposable fractions FPOM and OPOM contribute 27% (HUA) and 22% (WUD) to the total SOC stocks. In HUA mean SOC stocks (0–30 cm depth) account for 10.4 kg m−2, compared to 3.4 kg m−2 in WUD. 53% of the SOC is stored in the upper 10 cm in WUD, in HUA only 39%. Highest POM values of 36% occurred in profiles with high soil moisture content. SOC stocks, soil moisture and active layer thickness correlated strongly in discontinuous permafrost while no correlation between SOC stocks and active layer thickness and only a weak relation between soil moisture and SOC stocks could be found in continuous permafrost. Consequently, permafrost-affected soils in discontinuous permafrost environments are susceptible to soil moisture changes due to alterations in quantity and seasonal distribution of precipitation, increasing temperature and therefore evaporation. PMID:23468904

  9. Demographic and Clinical Findings in Pediatric Patients Affected by Organic Acidemia

    PubMed Central

    NAJAFI, Reza; HASHEMIPOUR, Mahin; MOSTOFIZADEH, Neda; GHAZAVI, Mohammadreza; NASIRI, Jafar; SHAHSANAI, Armindokht; FAMORI, Fatemeh; NAJAFI, Fatemeh; MOAFI, Mohammad

    2016-01-01

    Objective Metabolic disorders, which involve many different organs, can be ascribed to enzyme deficiency or dysfunction and manifest with a wide range of clinical symptoms. This study evaluated some of the demographic and clinical findings in pediatric patients affected by organic acidemia. Materials & Methods This cross-sectional study was part of a larger study conducted in patients with metabolic disorders during a period of 7 years from 2007 to 2014 in Isfahan Province, Iran. Our study covered a wide range of cases from newborn infants (one-week old) to adolescents (children up to the age of 17 years). This study evaluated patients’ demographic information, history of disease, developmental and educational status, clinical and general conditions. Phone and in-person interviews were used to gather information. Results Out of 5100 patients screened in this study, 392 patients were affected by one of the different metabolic disorders and 167 individuals were diagnosed as organic acidemia. Propionic acidemia/methyl malonic acidemia (PA/MMA) was the most prevalent form of this metabolic disorder. The frequency of consanguinity was 84.7% in the group of patients. The mortality rate was 18.8% in patients with organic academia. Conclusion Each of the metabolic diseases, as a separate entity, is rare; nevertheless, in aggregate they have a somewhat high overall prevalence. These diseases result in mental and developmental disorders in the absence of quick diagnosis and initiation of treatment. Furthermore, more mutations should be identified in societies affected by consanguinity. Further research should also be conducted to determine worthwhile and more-efficient screening methods as well as long term neurological prognosis. PMID:27247587

  10. Thresholds of hypoxia for marine biodiversity.

    PubMed

    Vaquer-Sunyer, Raquel; Duarte, Carlos M

    2008-10-01

    Hypoxia is a mounting problem affecting the world's coastal waters, with severe consequences for marine life, including death and catastrophic changes. Hypoxia is forecast to increase owing to the combined effects of the continued spread of coastal eutrophication and global warming. A broad comparative analysis across a range of contrasting marine benthic organisms showed that hypoxia thresholds vary greatly across marine benthic organisms and that the conventional definition of 2 mg O(2)/liter to designate waters as hypoxic is below the empirical sublethal and lethal O(2) thresholds for half of the species tested. These results imply that the number and area of coastal ecosystems affected by hypoxia and the future extent of hypoxia impacts on marine life have been generally underestimated. PMID:18824689

  11. Habitat management affects soil chemistry and allochthonous organic inputs mediating microbial structure and exo-enzyme activity in Wadden Sea salt-marsh soils

    NASA Astrophysics Data System (ADS)

    Mueller, Peter; Granse, Dirk; Thi Do, Hai; Weingartner, Magdalena; Nolte, Stefanie; Hoth, Stefan; Jensen, Kai

    2016-04-01

    The Wadden Sea (WS) region is Europe's largest wetland and home to approximately 20% of its salt marsh area. Mainland salt marshes of the WS are anthropogenically influenced systems and have traditionally been used for livestock grazing in wide parts. After foundation of WS National Parks in the late 1980s and early 1990s, artificial drainage has been abandoned; however, livestock grazing is still common in many areas of the National Parks and is under ongoing discussion as a habitat-management practice. While studies so far focused on effects of livestock grazing on biodiversity, little is known about how biogeochemical processes, element cycling, and particularly carbon sequestration are affected. Here, we present data from a recent field study focusing on grazing effects on soil properties, microbial exo-enzyme activity, microbial abundance and structure. Exo-enzyme activity was studied conducting digestive enzyme assays for various enzymes involved in C- and N cycling. Microbial abundance and structure was assessed measuring specific gene abundance of fungi and bacteria using quantitative PCR. Soil compaction induced by grazing led to higher bulk density and decreases in soil redox (∆ >100 mV). Soil pH was significantly lower in grazed parts. Further, the proportion of allochthonous organic matter (marine input) was significantly smaller in grazed vs. ungrazed sites, likely caused by a higher sediment trapping capacity of the taller vegetation in the ungrazed sites. Grazing induced changes in bulk density, pH and redox resulted in reduced activity of enzymes involved in microbial C acquisition; however, there was no grazing effect on enzymes involved in N acquisition. While changes in pH, bulk density or redox did not affect microbial abundance and structure, the relative amount of marine organic matter significantly reduced the relative abundance of fungi (F:B ratio). We conclude that livestock grazing directly affects microbial exo-enzyme activity, thus

  12. Effects-Directed Analysis of Dissolved Organic Compounds in Oil Sands Process-Affected Water.

    PubMed

    Morandi, Garrett D; Wiseman, Steve B; Pereira, Alberto; Mankidy, Rishikesh; Gault, Ian G M; Martin, Jonathan W; Giesy, John P

    2015-10-20

    Acute toxicity of oil sands process-affected water (OSPW) is caused by its complex mixture of bitumen-derived organics, but the specific chemical classes that are most toxic have not been demonstrated. Here, effects-directed analysis was used to determine the most acutely toxic chemical classes in OSPW collected from the world's first oil sands end-pit lake. Three sequential rounds of fractionation, chemical analysis (ultrahigh resolution mass spectrometry), and acute toxicity testing (96 h fathead minnow embryo lethality and 15 min Microtox bioassay) were conducted. Following primary fractionation, toxicity was primarily attributable to the neutral extractable fraction (F1-NE), containing 27% of original organics mass. In secondary fractionation, F1-NE was subfractionated by alkaline water washing, and toxicity was primarily isolated to the ionizable fraction (F2-NE2), containing 18.5% of the original organic mass. In the final round, chromatographic subfractionation of F2-NE2 resulted in two toxic fractions, with the most potent (F3-NE2a, 11% of original organic mass) containing predominantly naphthenic acids (O2(-)). The less-toxic fraction (F3-NE2b, 8% of original organic mass) contained predominantly nonacid species (O(+), O2(+), SO(+), NO(+)). Evidence supports naphthenic acids as among the most acutely toxic chemical classes in OSPW, but nonacidic species also contribute to acute toxicity of OSPW. PMID:26381019

  13. Identification of candidate structured RNAs in the marine organism 'Candidatus Pelagibacter ubique'

    PubMed Central

    Meyer, Michelle M; Ames, Tyler D; Smith, Daniel P; Weinberg, Zasha; Schwalbach, Michael S; Giovannoni, Stephen J; Breaker, Ronald R

    2009-01-01

    Background Metagenomic sequence data are proving to be a vast resource for the discovery of biological components. Yet analysis of this data to identify functional RNAs lags behind efforts to characterize protein diversity. The genome of 'Candidatus Pelagibacter ubique' HTCC 1062 is the closest match for approximately 20% of marine metagenomic sequence reads. It is also small, contains little non-coding DNA, and has strikingly low GC content. Results To aid the discovery of RNA motifs within the marine metagenome we exploited the genomic properties of 'Cand. P. ubique' by targeting our search to long intergenic regions (IGRs) with relatively high GC content. Analysis of known RNAs (rRNA, tRNA, riboswitches etc.) shows that structured RNAs are significantly enriched in such IGRs. To identify additional candidate structured RNAs, we examined other IGRs with similar characteristics from 'Cand. P. ubique' using comparative genomics approaches in conjunction with marine metagenomic data. Employing this strategy, we discovered four candidate structured RNAs including a new riboswitch class as well as three additional likely cis-regulatory elements that precede genes encoding ribosomal proteins S2 and S12, and the cytoplasmic protein component of the signal recognition particle. We also describe four additional potential RNA motifs with few or no examples occurring outside the metagenomic data. Conclusion This work begins the process of identifying functional RNA motifs present in the metagenomic data and illustrates how existing completed genomes may be used to aid in this task. PMID:19531245

  14. Simulated coal spill causes mortality and growth inhibition in tropical marine organisms

    PubMed Central

    Berry, Kathryn L. E.; Hoogenboom, Mia O.; Flores, Florita; Negri, Andrew P.

    2016-01-01

    Coal is a principal fossil fuel driving economic and social development, and increases in global coal shipments have paralleled expansion of the industry. To identify the potential harm associated with chronic marine coal contamination, three taxa abundant in tropical marine ecosystems (the coral Acropora tenuis, the reef fish Acanthochromis polyacanthus and the seagrass Halodule uninervis) were exposed to five concentrations (0–275 mg coal l−1) of suspended coal dust (<63 μm) over 28 d. Results demonstrate that chronic coal exposure can cause considerable lethal effects on corals, and reductions in seagrass and fish growth rates. Coral survivorship and seagrass growth rates were inversely related to increasing coal concentrations (≥38 mg coal l−1) and effects increased between 14 and 28 d, whereas fish growth rates were similarly depressed at all coal concentrations tested. This investigation provides novel insights into direct coal impacts on key tropical taxa for application in the assessment of risks posed by increasing coal shipments in globally threatened marine ecosystems. PMID:27174014

  15. Simulated coal spill causes mortality and growth inhibition in tropical marine organisms.

    PubMed

    Berry, Kathryn L E; Hoogenboom, Mia O; Flores, Florita; Negri, Andrew P

    2016-01-01

    Coal is a principal fossil fuel driving economic and social development, and increases in global coal shipments have paralleled expansion of the industry. To identify the potential harm associated with chronic marine coal contamination, three taxa abundant in tropical marine ecosystems (the coral Acropora tenuis, the reef fish Acanthochromis polyacanthus and the seagrass Halodule uninervis) were exposed to five concentrations (0-275 mg coal l(-1)) of suspended coal dust (<63 μm) over 28 d. Results demonstrate that chronic coal exposure can cause considerable lethal effects on corals, and reductions in seagrass and fish growth rates. Coral survivorship and seagrass growth rates were inversely related to increasing coal concentrations (≥38 mg coal l(-1)) and effects increased between 14 and 28 d, whereas fish growth rates were similarly depressed at all coal concentrations tested. This investigation provides novel insights into direct coal impacts on key tropical taxa for application in the assessment of risks posed by increasing coal shipments in globally threatened marine ecosystems. PMID:27174014

  16. Simulated coal spill causes mortality and growth inhibition in tropical marine organisms

    NASA Astrophysics Data System (ADS)

    Berry, Kathryn L. E.; Hoogenboom, Mia O.; Flores, Florita; Negri, Andrew P.

    2016-05-01

    Coal is a principal fossil fuel driving economic and social development, and increases in global coal shipments have paralleled expansion of the industry. To identify the potential harm associated with chronic marine coal contamination, three taxa abundant in tropical marine ecosystems (the coral Acropora tenuis, the reef fish Acanthochromis polyacanthus and the seagrass Halodule uninervis) were exposed to five concentrations (0–275 mg coal l‑1) of suspended coal dust (<63 μm) over 28 d. Results demonstrate that chronic coal exposure can cause considerable lethal effects on corals, and reductions in seagrass and fish growth rates. Coral survivorship and seagrass growth rates were inversely related to increasing coal concentrations (≥38 mg coal l‑1) and effects increased between 14 and 28 d, whereas fish growth rates were similarly depressed at all coal concentrations tested. This investigation provides novel insights into direct coal impacts on key tropical taxa for application in the assessment of risks posed by increasing coal shipments in globally threatened marine ecosystems.

  17. Experimental and computational analysis of a novel flow channel to assess the adhesion strength of sessile marine organisms.

    PubMed

    Dimartino, Simone; Mather, Anton V; Alestra, Tommaso; Nawada, Suhas; Haber, Meir

    2015-02-01

    Bioadhesives produced by marine macroalgae represent a potential source of inspiration for the development of water-resistant adhesives. Assessing their adhesion strength, however, remains difficult owing to low volumes of adhesive material produced, low solubility and rapid curing time. These difficulties can be circumvented by testing the adhesion strength of macroalgae propagules attached to a substrate. In this paper, we present a simple, novel flow channel used to test the adhesion strength of the germlings of the fucalean alga Hormosira banksii to four substrates of biomedical relevance (PMMA, agar, gelatin and gelatin + lipid). The adhesion strength of H. banksii germlings was found to increase in a time-dependent manner, with minimal adhesion success after a settlement period of 6 h and maximum adhesion strength achieved 24 h after initial settlement. Adhesion success increased most dramatically between 6 and 12 h settlement time, while no additional increase in adhesion strength was recorded for settlement times over 24 h. No significant difference in adhesion strength to the various substrates was observed. Computational fluid dynamics (CFD) was used to estimate the influence of fluid velocity and germling density on drag force acting on the settled organisms. CFD modelling showed that, on average, the drag force decreased with increasing germling number, suggesting that germlings would benefit from gregarious settlement behaviour. Collectively, our results contribute to a better understanding of the mechanisms allowing benthic marine organisms to thrive in hydrodynamically stressful environments and provide useful insights for further investigations. PMID:25657838

  18. Experimental and computational analysis of a novel flow channel to assess the adhesion strength of sessile marine organisms

    PubMed Central

    Dimartino, Simone; Mather, Anton V.; Alestra, Tommaso; Nawada, Suhas; Haber, Meir

    2015-01-01

    Bioadhesives produced by marine macroalgae represent a potential source of inspiration for the development of water-resistant adhesives. Assessing their adhesion strength, however, remains difficult owing to low volumes of adhesive material produced, low solubility and rapid curing time. These difficulties can be circumvented by testing the adhesion strength of macroalgae propagules attached to a substrate. In this paper, we present a simple, novel flow channel used to test the adhesion strength of the germlings of the fucalean alga Hormosira banksii to four substrates of biomedical relevance (PMMA, agar, gelatin and gelatin + lipid). The adhesion strength of H. banksii germlings was found to increase in a time-dependent manner, with minimal adhesion success after a settlement period of 6 h and maximum adhesion strength achieved 24 h after initial settlement. Adhesion success increased most dramatically between 6 and 12 h settlement time, while no additional increase in adhesion strength was recorded for settlement times over 24 h. No significant difference in adhesion strength to the various substrates was observed. Computational fluid dynamics (CFD) was used to estimate the influence of fluid velocity and germling density on drag force acting on the settled organisms. CFD modelling showed that, on average, the drag force decreased with increasing germling number, suggesting that germlings would benefit from gregarious settlement behaviour. Collectively, our results contribute to a better understanding of the mechanisms allowing benthic marine organisms to thrive in hydrodynamically stressful environments and provide useful insights for further investigations. PMID:25657838

  19. Stable isotope evidence of terrestrial organic matter incorporation into coastal marine food webs: impact of Rhone River inputs on five NW Mediterranean marine flatfish species.

    NASA Astrophysics Data System (ADS)

    Darnaude, A. M.; Salen-Picard, C.; Harmelin-Vivien, M.

    2003-04-01

    The positive influence of land-based run-off on coastal fishery production is thought to be of particular importance for oligotrophic seas such as the Mediterranean. In order to estimate the impact of the Rhone River inputs of particulate organic matter (POM) on exploited demersal fish populations, stable isotope signature in nitrogen (δ15N) and carbon (δ13C) were determined for both juveniles and adults of the five main flatfish species living off the Rhone delta (Arnoglossus laterna, Buglossidium luteum, Citharus linguatula, Solea impar and Solea solea) and the main components of their food webs. The five flatfish species showed inter and intra-specific differences in isotopic signatures. The δ15N significantly increased from the smallest species to the largest ones and, in all species, from juveniles to adults (P<0.05), which indicated a global increase in trophic level with fish body size. Concerning the carbon signature, the δ13C obtained indicated an incorporation of organic material from terrestrial origin in the flesh of all the species. This incorporation was minimum for C. linguatula and reduced for all the species with the exception of S. solea for which a significantly (P<0.001) lower δ13C indicated an important use of organic matter from terrestrial origin. Mean δ13C values also differed significantly between juveniles and adults of B. luteum and S. impar (P<0.05), suggesting changes in terrestrial organic matter use with growth in these two species. To explain inter and intra-specific differences in δ13C, stable isotope data were compared with gut content analyses (prey % total contents mass, W%) performed on the same fishes. The δ13C signature of fishes was inversely related to the W% of polychaetes in their diet, and not to other prey categories. The common sole S. solea, that fed mainly on polychaetes (W% > 50% at all benthic stages of life), exhibited the most negative mean δ13C for both juveniles and adults among all the fish species

  20. Determination of Natural 14C Abundances in Dissolved Organic Carbon in Organic-Rich Marine Sediment Porewaters by Thermal Sulfate Reduction

    NASA Astrophysics Data System (ADS)

    Johnson, L.; Komada, T.

    2010-12-01

    The abundances of natural 14C in dissolved organic carbon (DOC) in the marine environment hold clues regarding the processes that influence the biogeochemical cycling of this large carbon reservoir. At present, UV irradiation is the widely accepted method for oxidizing seawater DOC for determination of their 14C abundances. This technique yields precise and accurate values with low blanks, but it requires a dedicated vacuum line, and hence can be difficult to implement. As an alternative technique that can be conducted on a standard preparatory vacuum line, we modified and tested a thermal sulfate reduction method that was previously developed to determine δ13C values of marine DOC (Fry B. et al., 1996. Analysis of marine DOC using a dry combustion method. Mar. Chem., 54: 191-201.) to determine the 14C abundances of DOC in marine sediment porewaters. In this method, the sample is dried in a 100 ml round-bottom Pyrex flask in the presence of excess oxidant (K2SO4) and acid (H3PO4), and combusted at 550 deg.C. The combustion products are cryogenically processed to collect and quantify CO2 using standard procedures. Materials we have oxidized to date range from 6-24 ml in volume, and 95-1500 μgC in size. The oxidation efficiency of this method was tested by processing known amounts of reagent-grade dextrose and sucrose (as examples of labile organic matter), tannic acid and humic acid (as examples of complex natural organic matter), and porewater DOC extracted from organic-rich nearshore sediments. The carbon yields for all of these materials averaged 99±4% (n=18). The 14C abundances of standard materials IAEA C-6 and IAEA C-5 processed by this method using >1mgC aliquots were within error of certified values. The size and the isotopic value of the blank were determined by a standard dilution technique using IAEA C-6 and IAEA C-5 that ranged in size from 150 to 1500 μgC (n=4 and 2, respectively). This yielded a blank size of 6.7±0.7 μgC, and a blank isotopic

  1. Algal blooms and "Marine snow": Mechanisms that enhance preservation of organic carbon in ancient fine-grained sediments

    USGS Publications Warehouse

    Macquaker, J.H.S.; Keller, M.A.; Davies, S.J.

    2010-01-01

    Combined petographic and geochemical methods are used to investigate the microfabrics present in thin sections prepared from representative organic carbon-rich mudstones collected from three successions (the Kimmeridge Clay Formation, the Jet Rock Member of the Whitby Mudstone Formation, and the pebble shale and Hue Shale). This study was initiated to determine how organic carbon-rich materials were being delivered to the sediment-water interface, and what happened to them after deposition, prior to deep burial. Analyses of the fabrics present shows that they exhibit many common attributes. In particular they are all: (1) highly heterogeneous on the scale of a thin section, (2) organized into thin beds (< 10 mm thick) composed mainly of mineral mixtures of fine-grained siliciclastic detritus and carbonate materials, and (3) contain significant concentrations of organic carbon, much of which is organized into laminasets that contain abundant organomineralic aggregates and pellets. In addition, framboidal pyrite (range of sizes from < 20 urn to < 1 ??m) and abundant agglutinated foraminifers are present in some units. The individual beds are commonly sharp-based and overlain by thin, silt lags. The tops of many of the beds have been homogenized and some regions of the pelleted laminasets contain small horizontal burrows. The organomineralic aggregates present in these mudstones are interpreted to be ancient examples of marine snow. This marine snow likely formed in the water column, particularly during phytoplankton blooms, and was then transported rapidly to the seafloor. The existence of the thin beds with homogenized tops and an in-situ infauna indicates that between blooms there was sufficient oxygen and time for a mixed layer to develop as a result of sediment colonization by diminutive organisms using either aerobic or dysaerobic metabolic pathways. These textures suggest that the constituents of these mudstones were delivered neither as a continuous rain of

  2. Supermarket Marine Biology.

    ERIC Educational Resources Information Center

    Colby, Jennifer A.; And Others

    1995-01-01

    Describes a survey used to determine the availability of intact marine vertebrates and live invertebrates in supermarkets. Results shows that local supermarkets frequently provide a variety of intact marine organisms suitable for demonstrations, experiments, or dissections. (ZWH)

  3. Hydrologic Treatments Affect Gaseous Carbon Loss From Organic Soils, Twitchell Island, California, October 1995-December 1997

    USGS Publications Warehouse

    Miller, Robin L.; Hastings, Lauren; Fujii, Roger

    2000-01-01

    Subsidence of organic soils in the Sacramento-San Joaquin Delta, California, has increased the potential for levee failure and flooding in the region. Because oxidation of the peat soils is a primary cause of subsidence, reversion of affected lands to wetlands has been proposed as a mitigation tool. To test this hypothesis, three 10 x 10 meter enclosures were built on Twitchell Island in the Delta and managed as different wetland habitats. Emissions of carbon dioxide and methane were measured in situ from October 1995 through December 1997, from the systems that developed under the different water-management treatments. Treatments included a seasonal control (SC) under current island management conditions; reverse flooding (RF), where the land is intentionally flooded from early dry season until midsummer; permanent shallow flooding (F); and a more deeply flooded, open-water (OW) treatment. Hydrologic treatments affected microbial processes, plant community and temperature dynamics which, in turn, affected carbon cycling. Water-management treatments with a period of flooding significantly decreased gaseous carbon emissions compared to the seasonal control. Permanent flooding treatments showed significantly higher methane fluxes than treatments with some period of aerobic conditions. Shallow flooding treatments created conditions that support cattail [Typha species (spp.)] marshes, while deep flooding precluded emergent vegetation. Carbon inputs to the permanent shallow flooding treatment tended to be greater than the measured losses. This suggests that permanent shallow flooding has the greatest potential for managing subsidence of these soils by generating organic substrate more rapidly than is lost through decomposition. Carbon input estimates of plant biomass compared to measurements of gaseous carbon losses indicate the potential for mitigation of subsidence through hydrologic management of the organic soils in the area.

  4. Néotectonique affectant les dépôts marins tyrrhéniens du littoral sud-est tunisien : implications pour les variations du niveau marinNeotectonics in the Tyrrhenian marine deposits of the southeastern Tunisian coast: implications for sea level changes

    NASA Astrophysics Data System (ADS)

    Bouaziz, Samir; Jedoui, Younes; Barrier, Éric; Angelier, Jacques

    2003-01-01

    Pleistocene marine deposits of so-called Tyrrhenian age in southeastern Tunisia include two lithostratigraphic units of Last Interglacial (marine isotopic substage 5e). The lower unit culminates at about +3 m above the sea level; the upper unit with Strombus bubonius culminates at +5 m. Brittle deformations affected the upper unit. The analysis of fault-slip data sets reveals a post-Tyrrhenian N020°E trending compression, consistent with joint patterns. This event induced limited vertical movements, showing that at the northeastern edge of the Saharan Platform, the coastal area of the southern Tunisia remained relatively stable since at least the Last Interglacial.

  5. Microplastics as vectors for bioaccumulation of hydrophobic organic chemicals in the marine environment: A state-of-the-science review.

    PubMed

    Ziccardi, Linda M; Edgington, Aaron; Hentz, Karyn; Kulacki, Konrad J; Kane Driscoll, Susan

    2016-07-01

    A state-of-the-science review was conducted to examine the potential for microplastics to sorb hydrophobic organic chemicals (HOCs) from the marine environment, for aquatic organisms to take up these HOCs from the microplastics, and for this exposure to result in adverse effects to ecological and human health. Despite concentrations of HOCs associated with microplastics that can be orders of magnitude greater than surrounding seawater, the relative importance of microplastics as a route of exposure is difficult to quantify because aquatic organisms are typically exposed to HOCs from various compartments, including water, sediment, and food. Results of laboratory experiments and modeling studies indicate that HOCs can partition from microplastics to organisms or from organisms to microplastics, depending on experimental conditions. Very little information is available to evaluate ecological or human health effects from this exposure. Most of the available studies measured biomarkers that are more indicative of exposure than effects, and no studies showed effects to ecologically relevant endpoints. Therefore, evidence is weak to support the occurrence of ecologically significant adverse effects on aquatic life as a result of exposure to HOCs sorbed to microplastics or to wildlife populations and humans from secondary exposure via the food chain. More data are needed to fully understand the relative importance of exposure to HOCs from microplastics compared with other exposure pathways. Environ Toxicol Chem 2016;35:1667-1676. © 2016 SETAC. PMID:27093569

  6. Protection behaviour: a phenomenon affecting organ and tissue donation in the 21st century?

    PubMed

    Kent, B C

    2004-03-01

    UK statistics show that whilst waiting lists for transplantation surgery continue to increase, donor numbers are static. This paper describes the hermeneutic phase of a mixed method study and puts forward the concept of protection behaviour as one explanation for nurses' reticence to discuss post-mortem donation wishes with patients' relatives. The desire to protect appears to influence attitudes, confidence levels and perceived ability to become involved in donor identification and donation discussion, consequently affecting the availability of transplantable organs and tissue. By understanding more fully why protective behaviours are employed, it increases the likelihood of a solution being found. PMID:14967184

  7. Soil warming affects soil organic matter chemistry of all density fractions of a mountain forest soil

    NASA Astrophysics Data System (ADS)

    Schnecker, Jörg; Wanek, Wolfgang; Borken, Werner; Schindlbacher, Andreas

    2016-04-01

    Rising temperatures enhance microbial decomposition of soil organic matter (SOM) and increase thereby the soil CO2 efflux. Elevated microbial activity might differently affect distinct SOM pools, depending on their stability and accessibility. Soil fractions derived from density fractionation have been suggested to represent SOM pools with different turnover times and stability against microbial decomposition. We here investigated the chemical and isotopic composition of bulk soil and three different density fractions of forest soils from a long term warming experiment in the Austrian Alps. At the time of sampling the soils in this experiment had been warmed during the snow-free period for 8 consecutive years. During that time no thermal adaptation of the microbial community could be identified and CO2 release from the soil continued to be elevated by the warming treatment. Our results which included organic C content, total N content, δ13C, δ 14C, δ 15N and the chemical composition, identified by pyrolysis-GC/MS, showed no significant differences in bulk soil between warming treatment and control. The differences in the three individual fractions (free particulate organic matter, occluded particulate organic matter and mineral associated organic matter) were mostly small and the direction of warming induced change was variable with fraction and sampling depth. We did however find statistically significant effects of warming in all density fractions from 0-10 cm depth, 10-20 cm depth or both. Our results also including significant changes in the supposedly more stable mineral associated organic matter fraction where δ 13C values decreased at both sampling depths and the relative proportion of N-bearing compounds decreased at a sampling depth of 10-20 cm. All the observed changes can be attributed to an interplay of enhanced microbial decomposition of SOM and increased root litter input. This study suggests that soil warming destabilizes all density fractions of

  8. Development of Marine Science and Technology in Africa. Working Group of Experts Sponsored by the United Nations Economic Commission for Africa (ECA) and United Nations Educational, Scientific and Cultural Organization (Unesco). Unesco Reports in Marine Sciences, No. 10.

    ERIC Educational Resources Information Center

    United Nations Educational, Scientific, and Cultural Organization, Paris (France). Div. of Marine Sciences.

    Beginning in the late 1970's, the United Nations Educational, Scientific and Cultural Organization (Unesco) and the United Nations Economic Commission for Africa (ECA) increased their efforts to formulate and implement African development programs. Reported in this document is a meeting on marine resource technology which was jointly convened by…

  9. Quality of fresh organic matter affects priming of soil organic matter and substrate utilization patterns of microbes

    NASA Astrophysics Data System (ADS)

    Wang, Hui; Boutton, Thomas W.; Xu, Wenhua; Hu, Guoqing; Jiang, Ping; Bai, Edith

    2015-05-01

    Changes in biogeochemical cycles and the climate system due to human activities are expected to change the quantity and quality of plant litter inputs to soils. How changing quality of fresh organic matter (FOM) might influence the priming effect (PE) on soil organic matter (SOM) mineralization is still under debate. Here we determined the PE induced by two 13C-labeled FOMs with contrasting nutritional quality (leaf vs. stalk of Zea mays L.). Soils from two different forest types yielded consistent results: soils amended with leaf tissue switched faster from negative PE to positive PE due to greater microbial growth compared to soils amended with stalks. However, after 16 d of incubation, soils amended with stalks had a higher PE than those amended with leaf. Phospholipid fatty acid (PLFA) results suggested that microbial demand for carbon and other nutrients was one of the major determinants of the PE observed. Therefore, consideration of both microbial demands for nutrients and FOM supply simultaneously is essential to understand the underlying mechanisms of PE. Our study provided evidence that changes in FOM quality could affect microbial utilization of substrate and PE on SOM mineralization, which may exacerbate global warming problems under future climate change.

  10. Quality of fresh organic matter affects priming of soil organic matter and substrate utilization patterns of microbes.

    PubMed

    Wang, Hui; Boutton, Thomas W; Xu, Wenhua; Hu, Guoqing; Jiang, Ping; Bai, Edith

    2015-01-01

    Changes in biogeochemical cycles and the climate system due to human activities are expected to change the quantity and quality of plant litter inputs to soils. How changing quality of fresh organic matter (FOM) might influence the priming effect (PE) on soil organic matter (SOM) mineralization is still under debate. Here we determined the PE induced by two (13)C-labeled FOMs with contrasting nutritional quality (leaf vs. stalk of Zea mays L.). Soils from two different forest types yielded consistent results: soils amended with leaf tissue switched faster from negative PE to positive PE due to greater microbial growth compared to soils amended with stalks. However, after 16 d of incubation, soils amended with stalks had a higher PE than those amended with leaf. Phospholipid fatty acid (PLFA) results suggested that microbial demand for carbon and other nutrients was one of the major determinants of the PE observed. Therefore, consideration of both microbial demands for nutrients and FOM supply simultaneously is essential to understand the underlying mechanisms of PE. Our study provided evidence that changes in FOM quality could affect microbial utilization of substrate and PE on SOM mineralization, which may exacerbate global warming problems under future climate change. PMID:25960162

  11. Quality of fresh organic matter affects priming of soil organic matter and substrate utilization patterns of microbes

    PubMed Central

    Wang, Hui; Boutton, Thomas W.; Xu, Wenhua; Hu, Guoqing; Jiang, Ping; Bai, Edith

    2015-01-01

    Changes in biogeochemical cycles and the climate system due to human activities are expected to change the quantity and quality of plant litter inputs to soils. How changing quality of fresh organic matter (FOM) might influence the priming effect (PE) on soil organic matter (SOM) mineralization is still under debate. Here we determined the PE induced by two 13C-labeled FOMs with contrasting nutritional quality (leaf vs. stalk of Zea mays L.). Soils from two different forest types yielded consistent results: soils amended with leaf tissue switched faster from negative PE to positive PE due to greater microbial growth compared to soils amended with stalks. However, after 16 d of incubation, soils amended with stalks had a higher PE than those amended with leaf. Phospholipid fatty acid (PLFA) results suggested that microbial demand for carbon and other nutrients was one of the major determinants of the PE observed. Therefore, consideration of both microbial demands for nutrients and FOM supply simultaneously is essential to understand the underlying mechanisms of PE. Our study provided evidence that changes in FOM quality could affect microbial utilization of substrate and PE on SOM mineralization, which may exacerbate global warming problems under future climate change. PMID:25960162

  12. Soil physical and hydrological properties as affected by long-term addition of various organic amendments

    NASA Astrophysics Data System (ADS)

    Eden, Marie; Völkel, Jörg; Mercier, Vincent; Labat, Christophe; Houot, Sabine

    2014-05-01

    The use of organic residues as soil amendments in agriculture not only reduces the amount of waste needing to be disposed of; it may also lead to improvements in soil properties, including physical and hydrological ones. The present study examines a long-term experiment called "Qualiagro", run jointly by INRA and Veolia Environment in Feucherolles, France (near Paris). It was initiated in 1998 on a loess-derived silt loam (787 g/kg silt, 152 g/kg clay) and includes ten treatments: four types of organic amendments and a control (CNT) each at two levels of mineral nitrogen (N) addition: minimal (Nmin) and optimal (Nopt). The amendments include three types of compost and farmyard manure (FYM), which were applied every other year at a rate of ca. 4 t carbon ha-1. The composts include municipal solid waste compost (MSW), co-compost of green wastes and sewage sludge (GWS), and biowaste compost (BIO). The plots are arranged in a randomized block design and have a size of 450 m²; each treatment is replicated four times (total of 40 plots). Ca. 15 years after the start of the experiment soil organic carbon (OC) had continuously increased in the amended plots, while it remained stable or decreased in the control plots. This compost- or manure-induced increase in OC plays a key role, affecting numerous dependant soil properties like bulk density, porosity and water retention. The water holding capacity (WHC) of a soil is of particular interest to farmers in terms of water supply for plants, but also indicates soil quality and functionality. Addition of OC may affect WHC in different ways: carbon-induced aggregation may increase larger-pore volume and hence WHC at the wet end while increased surface areas may lead to an increased retention of water at the dry end. Consequently it is difficult to predict (e.g. with pedotransfer functions) the impact on the amount of water available for plants (PAW), which was experimentally determined for the soils, along with the entire range

  13. Sedimentary organic matter in two Spitsbergen fjords: Terrestrial and marine contributions based on carbon and nitrogen contents and stable isotopes composition

    NASA Astrophysics Data System (ADS)

    Koziorowska, Katarzyna; Kuliński, Karol; Pempkowiak, Janusz

    2016-02-01

    The aim of this study was to estimate the spatial variability of organic carbon (Corg) and total nitrogen (Ntot) concentrations, Corg/Ntot ratios, stable isotopes of carbon and nitrogen (δ13Corg, δ15Ntot) and the proportions of autochthonous and allochtonous organic matter within recently deposited sediments of two Spitsbergen fjords: the Hornsund and the Adventfjord, which are affected to a different degree by the West Spitsbergen Current. Corg concentrations ranged from 1.38% to 1.98% in the Hornsund and from 1.73% to 3.85% in the Adventfjord. In both fjords the highest Corg concentrations were measured at the innermost stations and they decreased towards the mouths of the fjords. This suggests fresh water runoff to be an important source of organic matter (OM) for surface sediments. The results showed that both fjords differ significantly in terms of sedimentary organic matter characteristics. The samples from the Hornsund, except those from the innermost station in the Brepollen, had relatively low Corg/Ntot ratios, all within a narrow range (from 9.7 to 11.3). On the other hand significantly higher Corg/Ntot ratios, varying within a broad range (from 14.6 to 33.0), were measured in the Adventfjord. The samples from the Hornsund were characterized by higher δ13Corg (from -24.90‰ to -23.87‰) and δ15Ntot (from 3.02‰ to 4.93‰) than those from the Adventfjord (-25.94‰ to -24.69‰ and from 0.71‰ to 4.00‰, respectively). This is attributed to a larger proportion of marine organic matter. Using the two end-member approach proportions of terrestrial organic matter were evaluated. Terrestrial OM contribution for the Adventfjord was in the range of 82-83%, while in case of the Hornsund the results were in the range of 69-75%, with the exception of the innermost part of the fjord, where terrestrial organic matter contribution ranged from 80 to 82%. The strong positive correlation between δ13Corg and δ15Ntot was revealed. This was taken as an indicator

  14. Non-polar organic compounds in marine aerosols over the northern South China Sea: Influence of continental outflow.

    PubMed

    Zhao, Yan; Zhang, Yingyi; Fu, Pingqing; Ho, Steven Sai Hang; Ho, Kin Fai; Liu, Fobang; Zou, Shichun; Wang, Shan; Lai, Senchao

    2016-06-01

    Filter samples of total suspended particle (TSP) collected during a cruise campaign over the northern South China Sea (SCS) from September to October 2013 were analyzed for non-polar organic compounds (NPOCs) as well as organic carbon (OC), elemental carbon (EC) and water-soluble ions. A total of 115 NPOCs species in groups of n-alkanes, polycyclic aromatic hydrocarbons (PAHs), iso-/antiso-alkanes, hopanes, steranes, methylalkanes, branched alkanes, cycloalkanes, alkenes and phthalates were detected. The characteristics of NPOCs in marine TSP samples were investigated to understand the sources from the Asian continent and other regions. The concentrations of total NPOCs ranged from 19.8 to 288.2 ng/m(3) with an average of 87.9 ng/m(3), which accounted for 0.8-1.7% (average 1.0%) of organic matter (OM). n-Alkanes was the predominant group, accounting for 43.1-79.5%, followed by PAHs (5.5-44.4%) and hopanes (1.6-11.4%). We found that primary combustion (biomass burning/fossil fuel combustion) was the dominant source for the majority of NPOCs (89.1%). Biomass burning in southern/southeastern China via long-range transport was proposed to be a major contributor of NPOCs in marine aerosols over the northern SCS, suggested by the significant correlations between nss-K(+) and NPOCs groups as well as the analysis of air mass back-trajectory and fire spots. For the samples with strong continental influence, the strong enhancement in concentrations of n-alkanes, PAHs, hopanes and steranes were attributed to fossil fuel (coal/petroleum) combustion. In addition, terrestrial plants waxes were another contributor to NPOCs. PMID:27023121

  15. Advanced solid-state NMR characterization of marine dissolved organic matter isolated using the coupled reverse osmosis/electrodialysis method.

    PubMed

    Mao, Jingdong; Kong, Xueqian; Schmidt-Rohr, Klaus; Pignatello, Joseph J; Perdue, E Michael

    2012-06-01

    Advanced (13)C solid-state techniques were employed to investigate the major structural characteristics of two surface-seawater dissolved organic matter (DOM) samples isolated using the novel coupled reverse osmosis/electrodialysis method. The NMR techniques included quantitative (13)C direct polarization/magic angle spinning (DP/MAS) and DP/MAS with recoupled dipolar dephasing, (13)C cross-polarization/total sideband suppression (CP/TOSS), (13)C chemical shift anisotropy filter, CH, CH(2), and CH(n) selection, two-dimensional (1)H-(13)C heteronuclear correlation NMR (2D HETCOR), 2D HETCOR combined with dipolar dephasing, and (15)N cross-polarization/magic angle spinning (CP/MAS). The two samples (Coastal and Marine DOM) were collected at the mouth of the Ogeechee River and in the Gulf Stream, respectively. The NMR results indicated that they were structurally distinct. Coastal DOM contained significantly more aromatic and carbonyl carbons whereas Marine DOM was markedly enriched in alkoxy carbon (e.g., carbohydrate-like moieties). Both samples contained significant amide N, but Coastal DOM had nitrogen bonded to aromatic carbons. Our dipolar-dephased spectra indicated that a large fraction of alkoxy carbons were not protonated. For Coastal DOM, our NMR results were consistent with the presence of the major structural units of (1) carbohydrate-like moieties, (2) lignin residues, (3) peptides or amino sugars, and (4) COO-bonded alkyls. For Marine DOM, they were (1) carbohydrate-like moieties, (2) peptides or amino sugars, and (3) COO-bonded alkyls. In addition, both samples contained significant amounts of nonpolar alkyl groups. The potential sources of the major structural units of DOM were discussed in detail. Nonprotonated O-alkyl carbon content was proposed as a possible index of humification. PMID:22553962

  16. Influence of chemical and biological factors on trophic transfer of persistent organic pollutants in the northwater polynya marine food web.

    PubMed

    Fisk, A T; Hobson, K A; Norstrom, R J

    2001-02-15

    Persistent organic pollutants (POPs) and stable isotopes of nitrogen (delta 15N) were measured in zooplankton (6 species), a benthic invertebrate (Anonyx nugax), Arctic cod (Boreogadus saida), seabirds (6 species), and ringed seals (Phoca hispida) collected in 1998 in the Northwater Polynya to examine effects of biological and chemical factors on trophic transfer of POPs in an Arctic marine food web. Strong positive relationships were found between recalcitrant POP concentrations (lipid corrected) and trophic level based on stable isotopes of nitrogen, providing clear evidence of POP biomagnification in Arctic marine food webs. Food web magnification factors (FWMFs), derived from the slope of the POP--trophic level relationship, provided an overall magnification factor for the food web but over and underestimated biomagnification factors (BMFs) based on predator--prey concentrations in poikilotherms (fish) and homeotherms (seabirds and mammals), respectively. Greater biomagnification in homeotherms was attributed to their greater energy requirement and subsequent feeding rates. Within the homeotherms, seabirds had greater BMFs than ringed seals, consistent with greater energy demands in birds. Scavenging from marine mammal carcasses and accumulation in more contaminated winter habitats were considered important variables in seabird BMFs. Metabolic differences between species resulted in lower than expected BMFs, which would not be recognized in whole food web trophic level--POP relationships. The use of sigma POP groups, such as sigma PCB, is problematic because FWMFs and BMFs varied considerably between individual POPs. FWMFs of recalcitrant POPs had a strong positive relationship with log octanol--water partition coefficient (Kow). Results of this study show the utility of using delta 15N to characterize trophic level and trophic transfer of POPs but highlight the effects of species and chemical differences on trophic transfer of POPs that can be overlooked when

  17. Carbon nanotubes affect the toxicity of CuO nanoparticles to denitrification in marine sediments by altering cellular internalization of nanoparticle

    NASA Astrophysics Data System (ADS)

    Zheng, Xiong; Su, Yinglong; Chen, Yinguang; Wan, Rui; Li, Mu; Huang, Haining; Li, Xu

    2016-06-01

    Denitrification is an important pathway for nitrate transformation in marine sediments, and this process has been observed to be negatively affected by engineered nanomaterials. However, previous studies only focused on the potential effect of a certain type of nanomaterial on microbial denitrification. Here we show that the toxicity of CuO nanoparticles (NPs) to denitrification in marine sediments is highly affected by the presence of carbon nanotubes (CNTs). It was found that the removal efficiency of total NOX‑-N (NO3‑-N and NO2‑-N) in the presence of CuO NPs was only 62.3%, but it increased to 81.1% when CNTs appeared in this circumstance. Our data revealed that CuO NPs were more easily attached to CNTs rather than cell surface because of the lower energy barrier (3.5 versus 36.2 kT). Further studies confirmed that the presence of CNTs caused the formation of large, incompact, non-uniform dispersed, and more negatively charged CuO-CNTs heteroaggregates, and thus reduced the nanoparticle internalization by cells, leading to less toxicity to metabolism of carbon source, generation of reduction equivalent, and activities of nitrate reductase and nitrite reductase. These results indicate that assessing nanomaterial-induced risks in real circumstances needs to consider the “mixed” effects of nanomaterials.

  18. Carbon nanotubes affect the toxicity of CuO nanoparticles to denitrification in marine sediments by altering cellular internalization of nanoparticle.

    PubMed

    Zheng, Xiong; Su, Yinglong; Chen, Yinguang; Wan, Rui; Li, Mu; Huang, Haining; Li, Xu

    2016-01-01

    Denitrification is an important pathway for nitrate transformation in marine sediments, and this process has been observed to be negatively affected by engineered nanomaterials. However, previous studies only focused on the potential effect of a certain type of nanomaterial on microbial denitrification. Here we show that the toxicity of CuO nanoparticles (NPs) to denitrification in marine sediments is highly affected by the presence of carbon nanotubes (CNTs). It was found that the removal efficiency of total NOX(-)-N (NO3(-)-N and NO2(-)-N) in the presence of CuO NPs was only 62.3%, but it increased to 81.1% when CNTs appeared in this circumstance. Our data revealed that CuO NPs were more easily attached to CNTs rather than cell surface because of the lower energy barrier (3.5 versus 36.2 kT). Further studies confirmed that the presence of CNTs caused the formation of large, incompact, non-uniform dispersed, and more negatively charged CuO-CNTs heteroaggregates, and thus reduced the nanoparticle internalization by cells, leading to less toxicity to metabolism of carbon source, generation of reduction equivalent, and activities of nitrate reductase and nitrite reductase. These results indicate that assessing nanomaterial-induced risks in real circumstances needs to consider the "mixed" effects of nanomaterials. PMID:27279546

  19. Carbon nanotubes affect the toxicity of CuO nanoparticles to denitrification in marine sediments by altering cellular internalization of nanoparticle

    PubMed Central

    Zheng, Xiong; Su, Yinglong; Chen, Yinguang; Wan, Rui; Li, Mu; Huang, Haining; Li, Xu

    2016-01-01

    Denitrification is an important pathway for nitrate transformation in marine sediments, and this process has been observed to be negatively affected by engineered nanomaterials. However, previous studies only focused on the potential effect of a certain type of nanomaterial on microbial denitrification. Here we show that the toxicity of CuO nanoparticles (NPs) to denitrification in marine sediments is highly affected by the presence of carbon nanotubes (CNTs). It was found that the removal efficiency of total NOX−-N (NO3−-N and NO2−-N) in the presence of CuO NPs was only 62.3%, but it increased to 81.1% when CNTs appeared in this circumstance. Our data revealed that CuO NPs were more easily attached to CNTs rather than cell surface because of the lower energy barrier (3.5 versus 36.2 kT). Further studies confirmed that the presence of CNTs caused the formation of large, incompact, non-uniform dispersed, and more negatively charged CuO-CNTs heteroaggregates, and thus reduced the nanoparticle internalization by cells, leading to less toxicity to metabolism of carbon source, generation of reduction equivalent, and activities of nitrate reductase and nitrite reductase. These results indicate that assessing nanomaterial-induced risks in real circumstances needs to consider the “mixed” effects of nanomaterials. PMID:27279546

  20. Jellyfish Lake, Palau: early diagenesis of organic matter in sediments of an anoxic marine lake

    USGS Publications Warehouse

    Orem, W.H.; Burnett, W.C.; Landing, W.M.; Lyons, W.B.; Showers, W.

    1991-01-01

    The major postdepositional change in the sedimentary organic matter is carbohydrate biodegradation. Lignin and aliphatic substances are preserved in the sediments. Dissolved organic matter in pore waters is primarily composed of carbohydrates, reflecting the degradation of sedimentary carbohydrates. Rate constants for organic carbon degradation and sulfate reduction in sediments of the lake are about 10?? lower than in other anoxic sediments. This may reflect the vascular plant source and partly degraded nature of the organic matter reaching the sediments of the lake. -from Authors

  1. Mercury Photolytic Transformation Affected by Low-Molecular-Weight Natural Organics in Water

    SciTech Connect

    He, Feng; Zheng, Wang; Gu, Baohua; Liang, Liyuan

    2012-01-01

    Mechanisms by which dissolved organic matter (DOM) mediates the photochemical reduction of Hg(II) in aquatic ecosystems are not fully understood, owing to the heterogeneous nature and complex structural properties of DOM. In this work, naturally occurring aromatic compounds including salicylic, 4-hydrobenzoic, anthranilic, 4-aminobenzoic, and phthalic acid were systematically studied as surrogates for DOM in order to gain an improved mechanistic understanding of these compounds in the photoreduction of Hg(II) in water. We show that the photoreduction rates of Hg(II) are influenced not only by the substituent functional groups such as OH, NH2 and COOH on the benzene ring, but also the positioning of these functional groups on the ring structure. The Hg(II) photoreduction rate decreases in the order anthranilic acid > salicylic acid > phthalic acid according to the presence of the NH2, OH, COOH functional groups on benzoic acid. The substitution position of the functional groups affects reduction rates in the order anthranilic acid > 4-aminobenzoic acid and salicylic acid > 4-hydroxybenzoic acid. Reduction rates correlate strongly with ultraviolet (UV) absorption of these compounds and their concentrations, suggesting that the formation of organic free radicals during photolysis of these compounds is responsible for Hg(II) photoreduction. These results provide insight into the role of low-molecular-weight organic compounds and possibly DOM in Hg photoredox transformation and may thus have important implications for understanding Hg geochemical cycling in the environment.

  2. Sorption of hydrophobic pesticides on a Mediterranean soil affected by wastewater, dissolved organic matter and salts.

    PubMed

    Rodríguez-Liébana, José A; Mingorance, Ma Dolores; Peña, Aránzazu

    2011-03-01

    Irrigation with treated wastewaters as an alternative in countries with severe water shortage may influence the sorption of pesticides and their environmental effects, as wastewater contains higher concentrations of suspended and dissolved organic matter and inorganic compounds than freshwater. We have examined the sorption behaviour of three highly hydrophobic pesticides (the herbicide pendimethalin and the insecticides α-cypermethrin and deltamethrin) on a Mediterranean agricultural soil using the batch equilibration method. We considered wastewater, extracts from urban sewage sludge with different dissolved organic carbon contents, and inorganic salt solutions, using Milli Q water as a control. All pesticides were strongly retained by soil although some sorption occurred on the walls of the laboratory containers, especially when wastewater and inorganic salt solutions were used. The calculation of distribution constants by measuring pesticide concentrations in soil and solution indicated that pendimethalin sorption was not affected whereas α-cypermethrin and deltamethrin retention were significantly enhanced (ca. 5 and 2 times, respectively) when wastewater or salt solutions were employed. We therefore conclude that the increased sorption of the two pesticides caused by wastewater cannot be only the result of its dissolved organic carbon content, but also of the simultaneous presence of inorganic salts in the solution. PMID:20980092

  3. Size exclusion and anion exchange high performance liquid chromatography for characterizing metals bound to marine dissolved organic matter.

    PubMed

    García-Otero, Natalia; Bermejo-Barrera, Pilar; Moreda-Piñeiro, Antonio

    2013-01-14

    Size exclusion chromatography (SEC) followed by anion exchange chromatography (AEC) hyphenated with inductively coupled plasma-mass spectrometry (ICP-MS) was applied for fractionating metals bound to marine dissolved organic matter (DOM). Surface seawater samples (100 L) were subjected to tangential flow ultrafiltration (10,000 Da cut off) for isolating and pre-concentrating dissolved large molecules. The isolated fraction (retentate) consisted of 1L, which was further freeze-dried and re-dissolved to 250 mL with ultrapure water. After HI Trap desalting of the re-dissolved retentate, SEC with UV detection showed marine DOM ranging from 6.5 kDa (lower than the permeable volume of the SEC column) to 16 kDa. A further characterization of this fraction by AEC with UV detection revealed the existence of four groups of macromolecules exhibiting retention times of 2.3, 2.8, 4.5 and 14.0 min. AEC hyphenated with ICP-MS showed the presence of strontium and zinc in the first AE fraction isolated from the SEC fraction; while manganese was found to be bound to the second AE fraction. Cobalt was found to be bound to molecules comprising the third AE fraction. PMID:23265737

  4. Persistent organic pollutants in marine biota of São Pedro and São Paulo Archipelago, Brazil.

    PubMed

    Dias, Patrick S; Cipro, Caio V Z; Taniguchi, Satie; Montone, Rosalinda C

    2013-09-15

    Remote islands, such as the São Pedro and São Paulo Archipelago (SPSPA), Brazil, are pristine areas. However, these locations are not exempt from the arrival of anthropogenic agents, such as persistent organic pollutants (POPs). The present study aimed to determine the occurrence and distribution of POPs in the marine biota of the SPSPA. Sample extractions were performed using a microwave-assisted method. The predominant compounds were PCBs and DDTs, which respectively had mean wet weight concentrations of 62.23 and 9.23 ng g(-1) in the tropical two-wing flying fish (Exocoetus volitans), 78.66 and 6.81 ng g(-1) in the brown booby (Sula leucogaster) and 43.40 and 3.03 ng g(-1) in the red rock crab (Grapsus grapsus). Low levels of contaminants suggest a relative degree of isolation. Occurrence and distribution profiles of PCBs support long-range atmospheric transport as the main source of contamination and demonstrate the ubiquity of these pollutants in the marine environment. PMID:23830520

  5. Highly stable organic polymer field-effect transistor sensor for selective detection in the marine environment

    NASA Astrophysics Data System (ADS)

    Knopfmacher, Oren; Hammock, Mallory L.; Appleton, Anthony L.; Schwartz, Gregor; Mei, Jianguo; Lei, Ting; Pei, Jian; Bao, Zhenan

    2014-01-01

    In recent decades, the susceptibility to degradation in both ambient and aqueous environments has prevented organic electronics from gaining rapid traction for sensing applications. Here we report an organic field-effect transistor sensor that overcomes this barrier using a solution-processable isoindigo-based polymer semiconductor. More importantly, these organic field-effect transistor sensors are stable in both freshwater and seawater environments over extended periods of time. The organic field-effect transistor sensors are further capable of selectively sensing heavy-metal ions in seawater. This discovery has potential for inexpensive, ink-jet printed, and large-scale environmental monitoring devices that can be deployed in areas once thought of as beyond the scope of organic materials.

  6. Highly stable organic polymer field-effect transistor sensor for selective detection in the marine environment.

    PubMed

    Knopfmacher, Oren; Hammock, Mallory L; Appleton, Anthony L; Schwartz, Gregor; Mei, Jianguo; Lei, Ting; Pei, Jian; Bao, Zhenan

    2014-01-01

    In recent decades, the susceptibility to degradation in both ambient and aqueous environments has prevented organic electronics from gaining rapid traction for sensing applications. Here we report an organic field-effect transistor sensor that overcomes this barrier using a solution-processable isoindigo-based polymer semiconductor. More importantly, these organic field-effect transistor sensors are stable in both freshwater and seawater environments over extended periods of time. The organic field-effect transistor sensors are further capable of selectively sensing heavy-metal ions in seawater. This discovery has potential for inexpensive, ink-jet printed, and large-scale environmental monitoring devices that can be deployed in areas once thought of as beyond the scope of organic materials. PMID:24389531

  7. Phytoplankton lysis predicts dissolved organic carbon release in marine plankton communities

    NASA Astrophysics Data System (ADS)

    Agustí, S.; Duarte, C. M.

    2013-03-01

    The relationship between the percent extracellular carbon release (PER) and the specific lysis rates of phytoplankton was examined across a range of communities spanning from highly oligotrophic ones in the subtropical Atlantic Ocean to productive ones in the N. African upwelling and the Southern Ocean. Communities in oligotrophic waters supported high phytoplankton cell lysis rates and low particulate primary production rates but high dissolved primary production and PER. The percent extracellular carbon released increased with increasing lysis rates to reach an asymptote at about 80% PER with specific lysis rates > 1.5 d-1, observed in the most oligotrophic conditions tested. These results confirm that high phytoplankton mortality in the oligotrophic ocean leads to high PER, accounting for the large fraction of the photosynthetic carbon channelled through bacteria characteristic of oligotrophic marine communities.

  8. Responses of marine unicellular algae to brominated organic compounds in six growth media

    SciTech Connect

    Walsh, G.E.; Yoder, M.J.; McLaughlin, L.L.; Lores, E.M.

    1987-12-01

    Marine unicellular algae, Skeletonema costatum, Thalassiosira pseudonana, and Chlorella sp. were exposed to the industrial brominated compounds tetrabromobisphenol A, decabromobiphenyloxide (DBBO), hexabromocyclododecane (HBCD), pentabromomethylbenzene (PBMB), pentabromoethylbenzene (PBEB), and the herbicide bromoxynil (BROM), in six algal growth media. High concentrations of DBBO (1 mg liter-1), PBMB (1 mg liter-1), and PBEB (0.5 mg liter-1) reduced growth by less than 50%. EC50s of the other compounds varied with growth medium, with high EC50/low EC50 ratios between 1.3 and 9.9. Lowest EC50s, 9.3 to 12.0 micrograms liter-1, were obtained with S. costatum and HBCD. It is concluded that responses to toxicants in different media are the results of interactions among algae, growth medium, toxicant, and solvent carrier.

  9. Accumulation of polychlorinated organic contaminants from sediment by three benthic marine species

    SciTech Connect

    Pruell, R.J.; Rubinstein, N.I.; Taplin, B.K.; LiVolsi, J.A.; Bowen, R.D.

    1993-01-01

    A laboratory experiment was conducted to measure the accumulation of selected polychlorinated compounds by marine benthos exposed to environmentally contaminated sediment. Sandworms (Nereis virens), clams (Macoma nasuta), and grass shrimp (Palaemonetes pugio) were exposed to sediment collected from the Passaic River, New Jersey. All three species accumulated 2,3,7,8-tetrachlorodibenzo-p-dioxin (2,3,7,8-TCDD), 2,3,7,8-tetrachlorodibenzofuran (2,3,7,8-TCDF) and polychlorinated biphenyls (PCBs) from the sediment. In addition, a recently identified sulfur containing analog of tetrachlorinated dibenzofurans. The objectives of the study were to determine the relative bioavailability of 2,3,7,8-TCDD, 2,3,7,8-tetrachlorodibenzofuran (2,3,7,8-TCDF) and selected PCB congeners from bottom sediments as well as to examine the relationship between contaminant concentrations in sediments and biota.

  10. Structures of dimethylsulfoniopropionate-dependent demethylase from the marine organism Pelagabacter ubique

    SciTech Connect

    Schuller, David J.; Reisch, Chris R.; Moran, Mary Ann; Whitman, William B.; Lanzilotta, William N.

    2012-01-20

    Dimethylsulfoniopropionate (DMSP) is a ubiquitous algal metabolite and common carbon and sulfur source for marine bacteria. DMSP is a precursor for the climatically active gas dimethylsulfide that is readily oxidized to sulfate, sulfur dioxide, methanesulfonic acid, and other products that act as cloud condensation nuclei. Although the environmental importance of DMSP metabolism has been known for some time, the enzyme responsible for DMSP demethylation by marine bacterioplankton, dimethylsufoniopropionate-dependent demethylase A (DmdA, EC 2.1.1.B5), has only recently been identified and biochemically characterized. In this work, we report the structure for the apoenzyme DmdA from Pelagibacter ubique (2.1 {angstrom}), as well as for DmdA co-crystals soaked with substrate DMSP (1.6 {angstrom}) or the cofactor tetrahydrofolate (THF) (1.6 {angstrom}). Surprisingly, the overall fold of the DmdA is not similar to other enzymes that typically utilize the reduced form of THF and in fact is a triple domain structure similar to what has been observed for the glycine cleavage T protein or sarcosine oxidase. Specifically, while the THF binding fold appears conserved, previous biochemical studies have shown that all enzymes with a similar fold produce 5,10-methylene-THF, while DmdA catalyzes a redox-neutral methyl transfer reaction to produce 5-methyl-THF. On the basis of the findings presented herein and the available biochemical data, we outline a mechanism for a redox-neutral methyl transfer reaction that is novel to this conserved THF binding domain.

  11. Bioaccumulation of heavy metals in marine organisms from the Romanian sector of the Black Sea.

    PubMed

    Jitar, Oana; Teodosiu, Carmen; Oros, Andra; Plavan, Gabriel; Nicoara, Mircea

    2015-05-25

    The aim of this research was to study the accumulation of heavy metals (cadmium - Cd, lead - Pb, chromium - Cr, nickel - Ni, and copper - Cu) from water and sediments into living tissues of relevant marine species from different trophic levels of a food web, representative for shallow waters of the Romanian Black Sea Coast where the main anthropogenic impacts exist. The heavy metals concentrations were analysed by using an Atomic Absorption Spectrometer with graphite furnace, the results being further used to calculate the bioconcentration factors for a few key taxa like green and red algae, molluscs and fishes. Seven sampling sites influenced by anthropogenic pollution sources (municipal wastewater treatment plants and diffuse sources) were considered and a total of 300 samples were analysed for the period 2011-2012, this being the first unitary study for the Romanian Black Sea marine ecosystem. In 2011 and 2012 there were no significant differences between the sampling areas considering the heavy metals concentrations in water. For the sediments significant differences were observed between sampling sites for some heavy metals, namely Pb in 2011 and Pb, Cu and Cd in 2012, the highest concentrations being registered in the southern sector of the Romanian Black Sea shore, where the anthropogenic pollution sources are represented by the harbour and wastewater treatment plants. The values of the bioaccumulation factors (BCFsed) shows that algae are good accumulators for Cu>Pb>Ni>Cr>Cd, in comparison with BCFwater where the order of heavy metal accumulation was different: Cr>Ni>Pb>Cd>Cu. Molluscs have higher bioconcentration factors for Cu and Cd for sediments and for Cu and Ni for water. Rapana venosa accumulated more Cd and Cu. For fishes, Pb, Cu and Ni had the highest values in the tissues of benthonic species Mullus barbatus. In bivalve molluscs and fishes, in the majority of cases, there were not recorded exceeding mean concentrations as compared to the maximum

  12. Contents and composition of organic matter in subsurface soils affected by land use and soil mineralogy

    NASA Astrophysics Data System (ADS)

    Ellerbrock, Ruth H.; Kaiser, Michael

    2010-05-01

    Land use and mineralogy affect the ability of surface as well as subsurface soils to sequester organic carbon and their contribution to mitigate the greenhouse effect. This study aimed to investigate the long-term impact of land use (i.e., arable and forest) and soil mineralogy on contents and composition of soil organic matter (SOM) from subsurface soils. Seven soils different in mineralogy (Albic and Haplic Luvisol, Colluvic and Haplic Regosol, Haplic and Vertic Cambisol, Haplic Stagnosol) were selected within Germany. Soil samples were taken from forest and adjacent arable sites. First, particulate and water soluble organic matter were separated from the subsurface soil samples. From the remaining solid residues the OM(PY) fractions were separated, analyzed for its OC content (OCPY) and characterized by FTIR spectroscopy. For the arable subsurface soils multiple regression analyses indicate significant positive relationships between the soil organic carbon contents and the contents of i) exchangeable Ca and oxalate soluble Fe, and Alox contents. Further for the neutral arable subsurface soils the contents OCPY weighted by its C=O contents were found to be related to the contents of Ca indicating interactions between OM(PY) and Ca cations. For the forest subsurface soils (pH <5) the OCPY contents were positively related with the contents of Na-pyrophosphate soluble Fe and Al. For the acidic forest subsurface soils such findings indicate interactions between OM(PY) and Fe3+ and Al3+ cations. The effects of land use and soil mineralogy on contents and composition of SOM and OM(PY) will be discussed.

  13. Biogenic gradients in algal density affect the emergent properties of spatially self-organized mussel beds

    PubMed Central

    Liu, Quan-Xing; Weerman, Ellen J.; Gupta, Rohit; Herman, Peter M. J.; Olff, Han; van de Koppel, Johan

    2014-01-01

    Theoretical models highlight that spatially self-organized patterns can have important emergent effects on the functioning of ecosystems, for instance by increasing productivity and affecting the vulnerability to catastrophic shifts. However, most theoretical studies presume idealized homogeneous conditions, which are rarely met in real ecosystems. Using self-organized mussel beds as a case study, we reveal that spatial heterogeneity, resulting from the large-scale effects of mussel beds on their environment, significantly alters the emergent properties predicted by idealized self-organization models that assume homogeneous conditions. The proposed model explicitly considers that the suspended algae, the prime food for the mussels, are supplied by water flow from the seaward boundary of the bed, which causes in combination with consumption a gradual depletion of algae over the simulated domain. Predictions of the model are consistent with properties of natural mussel patterns observed in the field, featuring a decline in mussel biomass and a change in patterning. Model analyses reveal a fundamental change in ecosystem functioning when this self-induced algal depletion gradient is included in the model. First, no enhancement of secondary productivity of the mussels comparing with non-patterns states is predicted, irrespective of parameter setting; the equilibrium amount of mussels is entirely set by the input of algae. Second, alternate stable states, potentially present in the original (no algal gradient) model, are absent when gradual depletion of algae in the overflowing water layer is allowed. Our findings stress the importance of including sufficiently realistic environmental conditions when assessing the emergent properties of self-organized ecosystems. PMID:24759542

  14. An Ultrahydrophobic Fluorous Metal-Organic Framework Derived Recyclable Composite as a Promising Platform to Tackle Marine Oil Spills.

    PubMed

    Mukherjee, Soumya; Kansara, Ankit M; Saha, Debasis; Gonnade, Rajesh; Mullangi, Dinesh; Manna, Biplab; Desai, Aamod V; Thorat, Shridhar H; Singh, Puyam S; Mukherjee, Arnab; Ghosh, Sujit K

    2016-07-25

    Derived from a strategically chosen hexafluorinated dicarboxylate linker aimed at the designed synthesis of a superhydrophobic metal-organic framework (MOF), the fluorine-rich nanospace of a water-stable MOF (UHMOF-100) exhibits excellent water-repellent features. It registered the highest water contact angle (≈176°) in the MOF domain, marking the first example of an ultrahydrophobic MOF. Various experimental and theoretical studies reinforce its distinctive water-repellent characteristics, and the conjugation of superoleophilicity and unparalleled hydrophobicity of a MOF material has been coherently exploited to achieve real-time oil/water separation in recyclable membrane form, with significant absorption capacity performance. This is also the first report of an oil/water separating fluorinated ultrahydrophobic MOF-based membrane material, with potential promise for tackling marine oil spillages. PMID:27359254

  15. Brominated flame retardants in aquatic organisms from the North Sea in comparison with biota from the high Arctic marine environment.

    PubMed

    Sørmo, Eugen G; Jenssen, Bjørn M; Lie, Elisabeth; Skaare, Janneche U

    2009-10-01

    The extent of trophic transfer of brominated flame retardants (BFRs), including hexabromocyclododecane (HBCD) and seven polybrominated diphenyl ethers (PBDEs), were examined in pelagic and benthic aquatic animals (invertebrates and fish) in a near-shore estuary environment of the southeastern North Sea (Norway; 59 degrees N). Whole-body burdens of HBCD and several of the most abundant PBDEs biomagnified with increasing trophic position in the food web. Biomagnification of HBCD was particularly strong, resulting in whole-body burdens of this compound comparable to those of total PBDEs in the higher-trophic-level species. Body burdens of PBDEs were higher in pelagic than in benthic aquatic organisms. This was particularly evident for the lesser-brominated and volatile PBDE congeners. Atmospheric gas-water-phytoplankton exchange of these volatile compounds over the water surface may account for this observation. The PBDE burdens in pelagic zooplankton from the North Sea were more than 60-fold greater than those in corresponding pelagic zooplankton from the colder high Arctic latitudes (>78 degrees N) of Norway (Svalbard). This great difference may relate to reduced chemical gas-water exchange over open waters at the colder Arctic latitudes. However, previously measured whole-body burdens of BFRs in other aquatic marine organisms from the high Arctic were comparable or even exceeded those in the North Sea samples of the present study. These include sympagic (sea ice-associated) invertebrates and fish accumulating high burdens of particle-associated BFRs. The present study provides new insight regarding the distribution of BFRs in ecologically different compartments of marine ecosystems, essential information for understanding the food-web transfer and geographical dispersal of these compounds. PMID:19459721

  16. Application of excitation-emission fluorescent matrix spectroscopy in analysis of marine organic matter

    NASA Astrophysics Data System (ADS)

    Ulyantsev, A. S.; Ocherednik, V. V.; Romankevich, E. A.

    2015-01-01

    For the first time, on the basis of spectral fluorescent analysis of the surface seawater, we calculated the indices of composition and properties of the dissolved organic matter of the Kara Sea and identified the dominant fluorophors, whose fluorescence intensity quantitatively indicates the supply of terrigenous organic matter. The latter is transformed in various ways in the Ob River estuary and remote areas. The microbial biotransformation is probably the leading process of transformation of terrigenous organic matter actively delivered to the Kara Sea. The areas with an increased content of the humic components caused by formation of the desalinated lens are locally formed in the estuary zone of the Ob River.

  17. Soil organic matter dynamics under Beech and Hornbeam as affected by soil biological activity

    NASA Astrophysics Data System (ADS)

    Kooijman, A. M.; Cammeraat, L. H.

    2009-04-01

    Organic matter dynamics are highly affected both the soil fauna as well as the source of organic matter, having important consequences for the spatial heterogeneity of organic matter storage and conversion. We studied oldgrowth mixed deciduous forests in Central-Luxemburg on decalcified dolomitic marl, dominated by high-degradable hornbeam (Carpinus betulus L.) or low-degradable beech (Fagus sylvatica L.). Decomposition was measured both in the laboratory and in the field. Litter decomposition was higher for hornbeam than for beech under laboratory conditions, but especially in the field, which is mainly to be attributed to macro-fauna activity, specifically to earthworms (Lumbricus terrestris and Allolobophora species). We also investigated differences between beech and hornbeam with regard to litter input and habitat conditions. Total litter input was the same, but contribution of beech and hornbeam litter clearly differed between the two species. Also, mass of the ectorganic horizon and soil C:N ratio were significantly higher for beech, which was reflected in clear differences in the development of ectorganic profiles on top of the soil. Under beech a mull-moder was clearly present with a well developed fermentation and litter horizon, whereas under hornbeam all litter is incorporated into the soil, leaving the mineral soil surface bear in late summer (mull-type of horizon). In addition to litter quality, litter decomposition was affected by pH and soil moisture. Both pH and soil moisture were higher under hornbeam than under beech, which may reflect differences in soil development and litter quality effects over longer time scales. Under beech, dense layers of low-degradable litter may prevent erosion, and increase clay eluviation and leaching of base cations, leading to acid and dry conditions, which further decrease litter decay. Under hornbeam, the soil is not protected by a litter layer, and clay eluviation and acidification may be counteracted by erosion

  18. Hunt for Palytoxins in a Wide Variety of Marine Organisms Harvested in 2010 on the French Mediterranean Coast.

    PubMed

    Biré, Ronel; Trotereau, Sophie; Lemée, Rodolphe; Oregioni, Davide; Delpont, Christine; Krys, Sophie; Guérin, Thierry

    2015-08-01

    During the summer of 2010, 31 species including fish, echinoderms, gastropods, crustaceans, cephalopods and sponges were sampled in the Bay of Villefranche on the French Mediterranean coast and screened for the presence of PLTX-group toxins using the haemolytic assay. Liquid chromatography tandem mass spectrometry (LC-MS/MS) was used for confirmatory purposes and to determine the toxin profile. The mean toxin concentration in the whole flesh of all sampled marine organisms, determined using the lower- (LB) and upper-bound (UB) approach was 4.3 and 5.1 µg·kg(-1), respectively, with less than 1% of the results exceeding the European Food Safety Authority (EFSA) threshold of 30 µg·kg(-1)and the highest values being reported for sea urchins (107.6 and 108.0 µg·kg(-1)). Toxins accumulated almost exclusively in the digestive tube of the tested species, with the exception of octopus, in which there were detectable toxin amounts in the remaining tissues (RT). The mean toxin concentration in the RT of the sampled organisms (fishes, echinoderms and cephalopods) was 0.7 and 1.7 µg·kg(-1) (LB and UB, respectively), with a maximum value of 19.9 µg·kg(-1) for octopus RT. The herbivorous and omnivorous organisms were the most contaminated species, indicating that diet influences the contamination process, and the LC-MS/MS revealed that ovatoxin-a was the only toxin detected. PMID:26308009

  19. Hunt for Palytoxins in a Wide Variety of Marine Organisms Harvested in 2010 on the French Mediterranean Coast

    PubMed Central

    Biré, Ronel; Trotereau, Sophie; Lemée, Rodolphe; Oregioni, Davide; Delpont, Christine; Krys, Sophie; Guérin, Thierry

    2015-01-01

    During the summer of 2010, 31 species including fish, echinoderms, gastropods, crustaceans, cephalopods and sponges were sampled in the Bay of Villefranche on the French Mediterranean coast and screened for the presence of PLTX-group toxins using the haemolytic assay. Liquid chromatography tandem mass spectrometry (LC-MS/MS) was used for confirmatory purposes and to determine the toxin profile. The mean toxin concentration in the whole flesh of all sampled marine organisms, determined using the lower- (LB) and upper-bound (UB) approach was 4.3 and 5.1 µg·kg−1, respectively, with less than 1% of the results exceeding the European Food Safety Authority (EFSA) threshold of 30 µg·kg−1 and the highest values being reported for sea urchins (107.6 and 108.0 µg·kg−1). Toxins accumulated almost exclusively in the digestive tube of the tested species, with the exception of octopus, in which there were detectable toxin amounts in the remaining tissues (RT). The mean toxin concentration in the RT of the sampled organisms (fishes, echinoderms and cephalopods) was 0.7 and 1.7 µg·kg−1 (LB and UB, respectively), with a maximum value of 19.9 µg·kg−1 for octopus RT. The herbivorous and omnivorous organisms were the most contaminated species, indicating that diet influences the contamination process, and the LC-MS/MS revealed that ovatoxin-a was the only toxin detected. PMID:26308009

  20. Metals and PCB levels in some edible marine organisms from the Ionian Sea: dietary intake evaluation and risk for consumers.

    PubMed

    Giandomenico, Santina; Cardellicchio, Nicola; Spada, Lucia; Annicchiarico, Cristina; Di Leo, Antonella

    2016-07-01

    Concentrations of some metals (Cd, Cu, As, Hg, Pb) and polychlorinated biphenyls (PCBs) were investigated in edible marine organisms from different trophic levels and feeding behaviour like bivalve molluscs (Mytilus galloprovincialis and Chlamys glabra), gastropod molluscs (Hexaplex trunculus) and some commercial species of fish (Trachurus trachurus, Boops boops, Sarpa salpa and Gobius niger). These species were collected in the first inlet of the Mar Piccolo of Taranto (Ionian Sea, Southern Italy), classified as 'Site of National Interest' established by National Law 426 (1998) and included in the 'National Environmental Remediation and Restoration Projects'. The aim of this work was to investigate contamination levels and public health risks, associated with consuming seafood harvested from these areas. Moreover, in this study, was also estimated the weekly intake in children and adults, both for metals and PCBs. In comparison with the permissible limits set by EC Regulations, Cd and Pb levels were over the limit in the H. trunculus (in all sampling stations) and in the fish T. trachurus respectively. PCBs were over the legal limit in all sampled species with the exception of M. galloprovincialis (station 1), C. glabra and the herbivorous fish S. salpa. In the fish T. trachurus, for example, the concentration of six target PCBs was about five times higher than the EC limit. The estimated intakes of those trace elements included in this study through seafood consumption by the population exceed the provisional tolerable weekly intake recommended by the Joint FAO/WHO Expert Committee on Food Additives for Cd and Hg in the H. trunculus and T. trachurus, especially in children. Moreover, hazard quotience (HQ) for Hg and Cd was >1 in the children for T. trachurus and H. trunculus consumption. As regard non-dioxin-like PCB (NDL-PCB), the estimated intake were always above the 'provisional guidance value' (70 ng/kg body weight) Arnich et al. (Regul Toxicol Pharm 54

  1. Microbial mediated retention/transformation of organic and inorganic materials in freshwater and marine ecosystems

    EPA Science Inventory

    Aquatic ecosystems are globally connected by hydrological and biogeochemical cycles. Microorganisms inhabiting aquatic ecosystems form the basis of food webs, mediate essential element cycles, decompose natural organic matter, transform inorganic nutrients and metals, and degrad...

  2. Growth Response of Halophila engelmanni Aschers. to Sulfide, Copper, and Organic Nitrogen in Marine Sediments 1

    PubMed Central

    Pulich, Warren M.

    1983-01-01

    Growth response of the seagrass Halophila engelmanni Aschers. was studied using defined culture techniques. When added to the rhizosphere, nutrient-seawater medium supported vigorous plant growth, if substantial Cu (10 times that in modified Hoagland solution) plus organic N were present. H2S up to 0.2 millimolar in the sediment was not inhibitory. A requirement for exogenous organic N, especially urea, is postulated for vigorous growth of Halophila. Images Fig. 2 Fig. 3 PMID:16662940

  3. Marine Ecomechanics

    NASA Astrophysics Data System (ADS)

    Denny, Mark W.; Gaylord, Brian

    2010-01-01

    The emerging field of marine ecomechanics provides an explicit physical framework for exploring interactions among marine organisms and between these organisms and their environments. It exhibits particular utility through its construction of predictive, mechanistic models, a number of which address responses to changing climatic conditions. Examples include predictions of (a) the change in relative abundance of corals as a function of colony morphology, ocean acidity, and storm intensity; (b) the rate of disturbance and patch formation in beds of mussels, a competitive dominant on many intertidal shores; (c) the dispersal and recruitment patterns of giant kelps, an important nearshore foundation species; (d) the effects of turbulence on external fertilization, a widespread method of reproduction in the sea; and (e) the long-term incidence of extreme ecological events. These diverse examples emphasize the breadth of marine ecomechanics. Indeed, its principles can be applied to any ecological system.

  4. The β-richness of two detritivore caddisflies affects fine organic matter export.

    PubMed

    Patrick, Christopher J; Fernandez, Dylan H

    2013-08-01

    We used stream networks as a model system to test whether the ecosystem function, upstream production, and export of fine organic particles, an important subsidy to downstream habitats, would vary between two stream networks with identical detritivore species but different spatial distributions (i.e. high or low β-richness). Our experiment employed artificial stream networks with two simulated tributaries. We used two species of detritivorous caddisflies, Lepidostoma sp. and Pycnopsyche guttifer, in either sympatry (low β-richness) or allopatry (high β-richness) in the tributaries of each network. The tributaries were given either senesced or green speckled alder (Alnus incana rugosa). In the networks with senesced leaves, particle export was more than twice as great when the detritivores were in allopatry whereas interference competition in sympatry reduced particle export. In the networks with green leaves, particle export did not significantly vary between the allopatric and sympatric distributions because the interference competition was reduced and the two species had similar feeding rates on green leaves. Humans are altering β-richness by homogenizing or differentiating flora and fauna across habitats; however, little is known about how altering this type of biodiversity will affect ecosystem functions. Our experimental manipulation is a simple version of a change in the β-richness of the detritivores in a more complex stream network in nature. These results may indicate that shifts in species distributions across sites may significantly affect ecosystem functions, even when no species are lost from a watershed. PMID:23247687

  5. Seagrasses are negatively affected by organic matter loading and Arenicola marina activity in a laboratory experiment.

    PubMed

    Govers, Laura L; Pieck, Timon; Bouma, Tjeerd J; Suykerbuyk, Wouter; Smolders, Alfons J P; van Katwijk, Marieke M

    2014-06-01

    When two ecosystem engineers share the same natural environment, the outcome of their interaction will be unclear if they have contrasting habitat-modifying effects (e.g., sediment stabilization vs. sediment destabilization). The outcome of the interaction may depend on local environmental conditions such as season or sediment type, which may affect the extent and type of habitat modification by the ecosystem engineers involved. We mechanistically studied the interaction between the sediment-stabilizing seagrass Zostera noltii and the bioturbating and sediment-destabilizing lugworm Arenicola marina, which sometimes co-occur for prolonged periods. We investigated (1) if the negative sediment destabilization effect of A. marina on Z. noltii might be counteracted by positive biogeochemical effects of bioirrigation (burrow flushing) by A. marina in sulfide-rich sediments, and (2) if previously observed nutrient release by A. marina bioirrigation could affect seagrasses. We tested the individual and combined effects of A. marina presence and high porewater sulfide concentrations (induced by organic matter addition) on seagrass biomass in a full factorial lab experiment. Contrary to our expectations, we did not find an effect of A. marina on porewater sulfide concentrations. A. marina activities affected the seagrass physically as well as by pumping nutrients, mainly ammonium and phosphate, from the porewater to the surface water, which promoted epiphyte growth on seagrass leaves in our experimental set-up. We conclude that A. marina bioirrigation did not alleviate sulfide stress to seagrasses. Instead, we found synergistic negative effects of the presence of A. marina and high sediment sulfide levels on seagrass biomass. PMID:24633960

  6. Broiler skin color as affected by organic acids: influence of concentration and method of application.

    PubMed

    Bilgili, S F; Conner, D E; Pinion, J L; Tamblyn, K C

    1998-05-01

    Color of broiler skin was evaluated after exposure to organic acids under various concentrations and simulated potential plant application conditions. Breast skin from chilled broiler carcasses was treated with acetic (AA), citric (CA), lactic (LA), malic (ML), mandelic (MN), propionic (PA), or tartaric (TA) acids at 0.5, 1, 2, 4, and 6% concentrations. Each acid and concentration was applied in simulated dip (23 C for 15 s), scalder (50 C for 2 min), and immersion chiller (1 C for 60 min) conditions. A tap water control was included with each application method. Objective color values of L* (lightness), a* (redness), and b* (yellowness) were measured before and after the treatments to calculate color differentials under a factorial arrangement of organic acids and