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Sample records for affect organic matter

  1. Organic Matter Loading Affects Lodgepole Pine Seedling Growth

    NASA Astrophysics Data System (ADS)

    Wei, Xiaohua; Li, Qinglin; Waterhouse, M. J.; Armleder, H. M.

    2012-06-01

    Organic matter plays important roles in returning nutrients to the soil, maintaining forest productivity and creating habitats in forest ecosystems. Forest biomass is in increasing demand for energy production, and organic matter has been considered as a potential supply. Thus, an important management question is how much organic matter should be retained after forest harvesting to maintain forest productivity. To address this question, an experimental trial was established in 1996 to evaluate the responses of lodgepole pine seedling growth to organic matter loading treatments. Four organic matter loading treatments were randomly assigned to each of four homogeneous pine sites: removal of all organic matter on the forest floor, organic matter loading quantity similar to whole-tree-harvesting residuals left on site, organic matter loading quantity similar to stem-only-harvesting residuals, and organic matter loading quantity more similar to what would be found in disease- or insect-killed stands. Our 10-year data showed that height and diameter had 29 and 35 % increase, respectively, comparing the treatment with the most organic matter loading to the treatment with the least organic matter loading. The positive response of seedling growth to organic matter loading may be associated with nutrients and/or microclimate change caused by organic matter, and requires further study. The dynamic response of seedling growth to organic matter loading treatments highlights the importance of long-term studies. Implications of those results on organic matter management are discussed in the context of forest productivity sustainability.

  2. Organic matter loading affects lodgepole pine seedling growth.

    PubMed

    Wei, Xiaohua; Li, Qinglin; Waterhouse, M J; Armleder, H M

    2012-06-01

    Organic matter plays important roles in returning nutrients to the soil, maintaining forest productivity and creating habitats in forest ecosystems. Forest biomass is in increasing demand for energy production, and organic matter has been considered as a potential supply. Thus, an important management question is how much organic matter should be retained after forest harvesting to maintain forest productivity. To address this question, an experimental trial was established in 1996 to evaluate the responses of lodgepole pine seedling growth to organic matter loading treatments. Four organic matter loading treatments were randomly assigned to each of four homogeneous pine sites: removal of all organic matter on the forest floor, organic matter loading quantity similar to whole-tree-harvesting residuals left on site, organic matter loading quantity similar to stem-only-harvesting residuals, and organic matter loading quantity more similar to what would be found in disease- or insect-killed stands. Our 10-year data showed that height and diameter had 29 and 35 % increase, respectively, comparing the treatment with the most organic matter loading to the treatment with the least organic matter loading. The positive response of seedling growth to organic matter loading may be associated with nutrients and/or microclimate change caused by organic matter, and requires further study. The dynamic response of seedling growth to organic matter loading treatments highlights the importance of long-term studies. Implications of those results on organic matter management are discussed in the context of forest productivity sustainability.

  3. Soil organic matter composition affected by potato cropping managements

    USDA-ARS?s Scientific Manuscript database

    Organic matter is a small but important soil component. As a heterogeneous mixture of geomolecules and biomolecules, soil organic matter (SOM) can be fractionated into distinct pools with different solubility and lability. Water extractable organic matter (WEOM) fraction is the most labile and mobil...

  4. Composition of whole and water extractable organic matter of cattle manure affected by management practices

    USDA-ARS?s Scientific Manuscript database

    Organic matter (OM) is a major component of animal manure. In this chapter, we present two case studies on the multiple spectral features of whole and water extractable organic matter (WEOM) of cattle (beef and dairy) manure affected by differing management practices. Using wet chemistry and Fourie...

  5. Key soil functional properties affected by soil organic matter - evidence from published literature

    NASA Astrophysics Data System (ADS)

    Murphy, Brian

    2015-07-01

    The effect of varying the amount of soil organic matter on a range of individual soil properties was investigated using a literature search of published information largely from Australia, but also included relevant information from overseas. Based on published pedotransfer functions, soil organic matter was shown to increase plant available water by 2 to 3 mm per 10 cm for each 1% increase in soil organic carbon, with the largest increases being associated with sandy soils. Aggregate stability increased with increasing soil organic carbon, with aggregate stability decreasing rapidly when soil organic carbon fell below 1.2 to 1.5 5%. Soil compactibility, friability and soil erodibility were favourably improved by increasing the levels of soil organic carbon. Nutrient cycling was a major function of soil organic matter. Substantial amounts of N, P and S become available to plants when the soil organic matter is mineralised. Soil organic matter also provides a food source for the microorganisms involved in the nutrient cycling of N, P, S and K. In soils with lower clay contents, and less active clays such as kaolinites, soil organic matter can supply a significant amount of the cation exchange capacity and buffering capacity against acidification. Soil organic matter can have a cation exchange capacity of 172 to 297 cmol(+)/kg. As the cation exchange capacity of soil organic matter varies with pH, the effectiveness of soil organic matter to contribute to cation exchange capacity below pH 5.5 is often minimal. Overall soil organic matter has the potential to affect a range of functional soil properties.

  6. Quality of fresh organic matter affects priming of soil organic matter and substrate utilization patterns of microbes

    NASA Astrophysics Data System (ADS)

    Wang, Hui; Boutton, Thomas W.; Xu, Wenhua; Hu, Guoqing; Jiang, Ping; Bai, Edith

    2015-05-01

    Changes in biogeochemical cycles and the climate system due to human activities are expected to change the quantity and quality of plant litter inputs to soils. How changing quality of fresh organic matter (FOM) might influence the priming effect (PE) on soil organic matter (SOM) mineralization is still under debate. Here we determined the PE induced by two 13C-labeled FOMs with contrasting nutritional quality (leaf vs. stalk of Zea mays L.). Soils from two different forest types yielded consistent results: soils amended with leaf tissue switched faster from negative PE to positive PE due to greater microbial growth compared to soils amended with stalks. However, after 16 d of incubation, soils amended with stalks had a higher PE than those amended with leaf. Phospholipid fatty acid (PLFA) results suggested that microbial demand for carbon and other nutrients was one of the major determinants of the PE observed. Therefore, consideration of both microbial demands for nutrients and FOM supply simultaneously is essential to understand the underlying mechanisms of PE. Our study provided evidence that changes in FOM quality could affect microbial utilization of substrate and PE on SOM mineralization, which may exacerbate global warming problems under future climate change.

  7. Quality of fresh organic matter affects priming of soil organic matter and substrate utilization patterns of microbes.

    PubMed

    Wang, Hui; Boutton, Thomas W; Xu, Wenhua; Hu, Guoqing; Jiang, Ping; Bai, Edith

    2015-05-11

    Changes in biogeochemical cycles and the climate system due to human activities are expected to change the quantity and quality of plant litter inputs to soils. How changing quality of fresh organic matter (FOM) might influence the priming effect (PE) on soil organic matter (SOM) mineralization is still under debate. Here we determined the PE induced by two (13)C-labeled FOMs with contrasting nutritional quality (leaf vs. stalk of Zea mays L.). Soils from two different forest types yielded consistent results: soils amended with leaf tissue switched faster from negative PE to positive PE due to greater microbial growth compared to soils amended with stalks. However, after 16 d of incubation, soils amended with stalks had a higher PE than those amended with leaf. Phospholipid fatty acid (PLFA) results suggested that microbial demand for carbon and other nutrients was one of the major determinants of the PE observed. Therefore, consideration of both microbial demands for nutrients and FOM supply simultaneously is essential to understand the underlying mechanisms of PE. Our study provided evidence that changes in FOM quality could affect microbial utilization of substrate and PE on SOM mineralization, which may exacerbate global warming problems under future climate change.

  8. Quality of fresh organic matter affects priming of soil organic matter and substrate utilization patterns of microbes

    PubMed Central

    Wang, Hui; Boutton, Thomas W.; Xu, Wenhua; Hu, Guoqing; Jiang, Ping; Bai, Edith

    2015-01-01

    Changes in biogeochemical cycles and the climate system due to human activities are expected to change the quantity and quality of plant litter inputs to soils. How changing quality of fresh organic matter (FOM) might influence the priming effect (PE) on soil organic matter (SOM) mineralization is still under debate. Here we determined the PE induced by two 13C-labeled FOMs with contrasting nutritional quality (leaf vs. stalk of Zea mays L.). Soils from two different forest types yielded consistent results: soils amended with leaf tissue switched faster from negative PE to positive PE due to greater microbial growth compared to soils amended with stalks. However, after 16 d of incubation, soils amended with stalks had a higher PE than those amended with leaf. Phospholipid fatty acid (PLFA) results suggested that microbial demand for carbon and other nutrients was one of the major determinants of the PE observed. Therefore, consideration of both microbial demands for nutrients and FOM supply simultaneously is essential to understand the underlying mechanisms of PE. Our study provided evidence that changes in FOM quality could affect microbial utilization of substrate and PE on SOM mineralization, which may exacerbate global warming problems under future climate change. PMID:25960162

  9. Endogeic earthworms shape bacterial functional communities and affect organic matter mineralization in a tropical soil

    PubMed Central

    Bernard, Laetitia; Chapuis-Lardy, Lydie; Razafimbelo, Tantely; Razafindrakoto, Malalatiana; Pablo, Anne-Laure; Legname, Elvire; Poulain, Julie; Brüls, Thomas; O'Donohue, Michael; Brauman, Alain; Chotte, Jean-Luc; Blanchart, Eric

    2012-01-01

    Priming effect (PE) is defined as a stimulation of the mineralization of soil organic matter (SOM) following a supply of fresh organic matter. This process can have important consequences on the fate of SOM and on the management of residues in agricultural soils, especially in tropical regions where soil fertility is essentially based on the management of organic matter. Earthworms are ecosystem engineers known to affect the dynamics of SOM. Endogeic earthworms ingest large amounts of soil and assimilate a part of organic matter it contains. During gut transit, microorganisms are transported to new substrates and their activity is stimulated by (i) the production of readily assimilable organic matter (mucus) and (ii) the possible presence of fresh organic residues in the ingested soil. The objective of our study was to see (i) whether earthworms impact the PE intensity when a fresh residue is added to a tropical soil and (ii) whether this impact is linked to a stimulation/inhibition of bacterial taxa, and which taxa are affected. A tropical soil from Madagascar was incubated in the laboratory, with a 13C wheat straw residue, in the presence or absence of a peregrine endogeic tropical earthworm, Pontoscolex corethrurus. Emissions of 12CO2 and 13CO2 were followed during 16 days. The coupling between DNA-SIP (stable isotope probing) and pyrosequencing showed that stimulation of both the mineralization of wheat residues and the PE can be linked to the stimulation of several groups especially belonging to the Bacteroidetes phylum. PMID:21753801

  10. Soil warming affects soil organic matter chemistry of all density fractions of a mountain forest soil

    NASA Astrophysics Data System (ADS)

    Schnecker, Jörg; Wanek, Wolfgang; Borken, Werner; Schindlbacher, Andreas

    2016-04-01

    Rising temperatures enhance microbial decomposition of soil organic matter (SOM) and increase thereby the soil CO2 efflux. Elevated microbial activity might differently affect distinct SOM pools, depending on their stability and accessibility. Soil fractions derived from density fractionation have been suggested to represent SOM pools with different turnover times and stability against microbial decomposition. We here investigated the chemical and isotopic composition of bulk soil and three different density fractions of forest soils from a long term warming experiment in the Austrian Alps. At the time of sampling the soils in this experiment had been warmed during the snow-free period for 8 consecutive years. During that time no thermal adaptation of the microbial community could be identified and CO2 release from the soil continued to be elevated by the warming treatment. Our results which included organic C content, total N content, δ13C, δ 14C, δ 15N and the chemical composition, identified by pyrolysis-GC/MS, showed no significant differences in bulk soil between warming treatment and control. The differences in the three individual fractions (free particulate organic matter, occluded particulate organic matter and mineral associated organic matter) were mostly small and the direction of warming induced change was variable with fraction and sampling depth. We did however find statistically significant effects of warming in all density fractions from 0-10 cm depth, 10-20 cm depth or both. Our results also including significant changes in the supposedly more stable mineral associated organic matter fraction where δ 13C values decreased at both sampling depths and the relative proportion of N-bearing compounds decreased at a sampling depth of 10-20 cm. All the observed changes can be attributed to an interplay of enhanced microbial decomposition of SOM and increased root litter input. This study suggests that soil warming destabilizes all density fractions of

  11. Do Long-Term Changes in Organic Matter Inputs to Forest Soils Affect Dissolved Organic Matter Chemistry and Export?

    NASA Astrophysics Data System (ADS)

    Lajtha, K.; Strid, A.; Lee, B. S.

    2014-12-01

    Dissolved organic matter (DOM) production and transport play an important role in regulating organic matter (OM) distribution through a soil profile and ultimately, OM stabilization or export to aquatic systems. The contributions of varying OM inputs to the quality and amount of DOM as it passes through a soil profile remain relatively unknown. The Detrital Input and Removal Treatment (DIRT) site at the H. J. Andrews Experimental Forest in Oregon has undergone 17 years of litter, wood and root input manipulations and allows us to guage shifts in DOM chemistry induced by long-term changes to aboveground and belowground OM additions and exclusions. Using fluorescence and UV spectroscopy to characterize fluorescent properties, extent of decomposition, and sources of DOM in streams and soil solutions collected with lysimeters and soil extractions, we have assessed the importance of fresh OM inputs to DOM chemistry. Soil extracts from DIRT plots had a higher fluorescence index (FI) than lysimeter solutions or stream water. A high FI in surface water is generally interpreted as indicative of a high proportion of microbially-derived DOM. However, we suspect that the high FI in soil extracts is due to a higher proportion of non-aromatic DOM from fresh soil that microorganisms consume in transit through the soil profile to lysimeters or to streams. High redox index (RI) values were observed in lysimeters from the April 2014 sampling compared with the November 2013 sampling. These RI values show evidence of more reducing conditions at the end of the rainy season in the spring compared to the onset of the rainy season in the fall. Lysimeter water collected in No Input, No Litter, and No Root treatments contained high proportions of protein, suggesting the absence of carbon inputs changes activities of the microbial community. Observed variations reflect the viability of using fluorescent properties to explore the terrestrial-aquatic interface.

  12. Organic matter and pH affect the analysis efficiency of (31)P-NMR.

    PubMed

    Zhang, Wenqiang; Jin, Xin; Rong, Nan; Li, Jie; Shan, Baoqing

    2016-05-01

    Solution (31)P nuclear magnetic resonance spectroscopy ((31)P-NMR) is a useful method to analyze organic phosphorus (Po), but a general procedure for the analysis method is lacking. The authors used solution (31)P-NMR, which was found to be an effective method for analysis of Po in Haihe River sediment, to analyze the Po in the surface sediment in Eastern China at the regional scale, and found that the NaOH-ethylenediaminetetraacetic acid (EDTA) extraction rate was affected by environmental factors. At the regional scale, the extraction rate showed a positive relationship with loss on ignition, when the extraction rate was lower than 60%. The extraction rate had no relationship with the loss on ignition when the extraction rate was higher than 60%. The extraction rate showed a negative relationship with pH, which means that the extraction rate was higher in acidic sediment and lower in alkaline sediment. The ratio of TC/TN (the ratio of total carbon to total nitrogen) was considered to represent the origin of organic matter in the sediment. The extraction rate was high when the TC/TN ratio was lower than 20, meanwhile the extraction rate decreased as the TC/TN ratio increased. The results show that the origin of organic matter in sediment significantly affects the NaOH-EDTA extraction rate. This study will give theoretical support for building an effective and general solution (31)P-NMR analysis method. Copyright © 2015. Published by Elsevier B.V.

  13. Irrigation agriculture affects organic matter decomposition in semi-arid terrestrial and aquatic ecosystems.

    PubMed

    Arroita, Maite; Causapé, Jesús; Comín, Francisco A; Díez, Joserra; Jimenez, Juan José; Lacarta, Juan; Lorente, Carmen; Merchán, Daniel; Muñiz, Selene; Navarro, Enrique; Val, Jonatan; Elosegi, Arturo

    2013-12-15

    Many dryland areas are being converted into intensively managed irrigation crops, what can disrupt the hydrological regime, degrade soil and water quality, enhance siltation, erosion and bank instability, and affect biological communities. Still, the impacts of irrigation schemes on the functioning of terrestrial and aquatic ecosystems are poorly understood. Here we assess the effects of irrigation agriculture on breakdown of coarse organic matter in soil and water. We measured breakdown rates of alder and holm oak leaves, and of poplar sticks in terrestrial and aquatic sites following a gradient of increasing irrigation agriculture in a semi-arid Mediterranean basin transformed into irrigation agriculture in 50% of its surface. Spatial patterns of stick breakdown paralleled those of leaf breakdown. In soil, stick breakdown rates were extremely low in non-irrigated sites (0.0001-0.0003 day(-1)), and increased with the intensity of agriculture (0.0018-0.0044 day(-1)). In water, stick breakdown rates ranged from 0.0005 to 0.001 day(-1), and increased with the area of the basin subject to irrigation agriculture. Results showed that irrigation agriculture affects functioning of both terrestrial and aquatic ecosystems, accelerating decomposition of organic matter, especially in soil. These changes can have important consequences for global carbon budgets.

  14. Soil organic matter dynamics under Beech and Hornbeam as affected by soil biological activity

    NASA Astrophysics Data System (ADS)

    Kooijman, A. M.; Cammeraat, L. H.

    2009-04-01

    Organic matter dynamics are highly affected both the soil fauna as well as the source of organic matter, having important consequences for the spatial heterogeneity of organic matter storage and conversion. We studied oldgrowth mixed deciduous forests in Central-Luxemburg on decalcified dolomitic marl, dominated by high-degradable hornbeam (Carpinus betulus L.) or low-degradable beech (Fagus sylvatica L.). Decomposition was measured both in the laboratory and in the field. Litter decomposition was higher for hornbeam than for beech under laboratory conditions, but especially in the field, which is mainly to be attributed to macro-fauna activity, specifically to earthworms (Lumbricus terrestris and Allolobophora species). We also investigated differences between beech and hornbeam with regard to litter input and habitat conditions. Total litter input was the same, but contribution of beech and hornbeam litter clearly differed between the two species. Also, mass of the ectorganic horizon and soil C:N ratio were significantly higher for beech, which was reflected in clear differences in the development of ectorganic profiles on top of the soil. Under beech a mull-moder was clearly present with a well developed fermentation and litter horizon, whereas under hornbeam all litter is incorporated into the soil, leaving the mineral soil surface bear in late summer (mull-type of horizon). In addition to litter quality, litter decomposition was affected by pH and soil moisture. Both pH and soil moisture were higher under hornbeam than under beech, which may reflect differences in soil development and litter quality effects over longer time scales. Under beech, dense layers of low-degradable litter may prevent erosion, and increase clay eluviation and leaching of base cations, leading to acid and dry conditions, which further decrease litter decay. Under hornbeam, the soil is not protected by a litter layer, and clay eluviation and acidification may be counteracted by erosion

  15. Soil organic matter transformation in cryoturbated horizons of permafrost affected soils

    NASA Astrophysics Data System (ADS)

    Capek, Petr; Diakova, Katerina; Dickopp, Jan-Erik; Barta, Jiri; Santruckova, Hana; Wild, Birgit; Schnecker, Joerg; Guggenberg, Georg; Gentsch, Norman; Hugelius, Gustaf; Kuhry, Peter; Lashchinsky, Nikolaj; Gittel, Antje; Schleper, Christa; Mikutta, Robert; Palmtag, Juri; Shibistova, Olga; Urich, Tim; Zimov, Sergey; Richter, Andreas

    2014-05-01

    Cryoturbated soil horizons are special feature of permafrost affected soils. These soils are known to store great amount of organic carbon and cryoturbation undoubtedly contribute to it to large extent. Despite this fact there is almost no information about soil organic matter (SOM) transformation in cryoturbated horizons. Therefore we carried out long term incubation experiment in which we inspect SOM transformation in cryoturbated as well as in organic and mineral soil horizons under different temperature and redox regimes as potential drivers. We found out that lower SOM transformation in cryoturbated horizons compared to organic horizons was mainly limited by the amount of microbial biomass, which is extremely low in absolute numbers or expressed to SOM concentration. The biochemical transformation ensured by extracellular enzymes is relatively high leading to high concentrations of dissolved organic carbon in cryoturbated horizons. Nevertheless the final step of SOM transformation leading to C mineralization to CO2 or CH4 seems to be restricted by low microbial biomass. Critical step of biochemical transformation of complex SOM is dominated by phenoloxidases, which break down complex organic compounds to simple ones. Their oxygen consumption greatly overwhelms oxygen consumption of the whole microbial community. However the phenoloxidase activity shows strong temperature response with optimum at 13.7° C. Therefore we suggest that apparent SOM stability in cryoturbated horizons, which is expressed in old C14 dated age, is caused by low amount of microbial biomass and restricted diffusion of oxygen to extracellular enzymes in field.

  16. Sorption of hydrophobic pesticides on a Mediterranean soil affected by wastewater, dissolved organic matter and salts.

    PubMed

    Rodríguez-Liébana, José A; Mingorance, Ma Dolores; Peña, Aránzazu

    2011-03-01

    Irrigation with treated wastewaters as an alternative in countries with severe water shortage may influence the sorption of pesticides and their environmental effects, as wastewater contains higher concentrations of suspended and dissolved organic matter and inorganic compounds than freshwater. We have examined the sorption behaviour of three highly hydrophobic pesticides (the herbicide pendimethalin and the insecticides α-cypermethrin and deltamethrin) on a Mediterranean agricultural soil using the batch equilibration method. We considered wastewater, extracts from urban sewage sludge with different dissolved organic carbon contents, and inorganic salt solutions, using Milli Q water as a control. All pesticides were strongly retained by soil although some sorption occurred on the walls of the laboratory containers, especially when wastewater and inorganic salt solutions were used. The calculation of distribution constants by measuring pesticide concentrations in soil and solution indicated that pendimethalin sorption was not affected whereas α-cypermethrin and deltamethrin retention were significantly enhanced (ca. 5 and 2 times, respectively) when wastewater or salt solutions were employed. We therefore conclude that the increased sorption of the two pesticides caused by wastewater cannot be only the result of its dissolved organic carbon content, but also of the simultaneous presence of inorganic salts in the solution. Copyright © 2010 Elsevier Ltd. All rights reserved.

  17. Inorganic nutrient availability affects organic matter fluxes and metabolic activity in the soft coral genus Xenia.

    PubMed

    Bednarz, Vanessa N; Naumann, Malik S; Niggl, Wolfgang; Wild, Christian

    2012-10-15

    The release of organic matter (OM) by scleractinian corals represents a key physiological process that importantly contributes to coral reef ecosystem functioning, and is affected by inorganic nutrient availability. Although OM fluxes have been studied for several dominant reef taxa, no information is available for soft corals, one of the major benthic groups in tropical reef environments. Thus, this study investigates OM fluxes along with other key physiological parameters (i.e. photosynthesis, respiration and chlorophyll a tissue content) in the common soft coral genus Xenia after a 4-week exposure period to elevated ammonium (N; 20.0 μmol l(-1)), phosphate (P; 2.0 μmol l(-1)) and combined inorganic nutrient enrichment treatment (N+P). Corals maintained without nutrient enrichment served as non-treated controls and revealed constant uptake rates for particulate organic carbon (POC) (-0.315±0.161 mg POC m(-2) coral surface area h(-1)), particulate nitrogen (PN) (-0.053±0.018 mg PN m(-2) h(-1)) and dissolved organic carbon (DOC) (-4.8±2.1 mg DOC m(-2) h(-1)). Although DOC uptake significantly increased in the N treatment, POC flux was not affected. The P treatment significantly enhanced PN release as well as photosynthesis and respiration rates, suggesting that autotrophic carbon acquisition of zooxanthellae endosymbionts influences OM fluxes by the coral host. Our physiological findings confirm the significant effect of inorganic nutrient availability on OM fluxes and key metabolic processes for the soft coral Xenia, and provide the first clues on OM cycles initiated by soft corals in reef environments exposed to ambient and elevated inorganic nutrient concentrations.

  18. FACTORS AFFECTING COLORED DISSOLVED ORGANIC MATTER IN AQUATIC ENVIRONMENTS OF THE SOUTHEASTERN UNITED STATES

    EPA Science Inventory

    The sunlight-absorbing (colored) component of dissolved organic matter (CDOM) in aquatic environments is widely distributed in freshwaters and coastal regions where it influences the fate and transport of toxic organic substances and biologically-important metals such as mercury,...

  19. FACTORS AFFECTING COLORED DISSOLVED ORGANIC MATTER IN AQUATIC ENVIRONMENTS OF THE SOUTHEASTERN UNITED STATES

    EPA Science Inventory

    The sunlight-absorbing (colored) component of dissolved organic matter (CDOM) in aquatic environments is widely distributed in freshwaters and coastal regions where it influences the fate and transport of toxic organic substances and biologically-important metals such as mercury,...

  20. Mobility of prometryne in soil as affected by dissolved organic matter.

    PubMed

    Jiang, Lei; Huang, Jing; Liang, Lu; Zheng, Peng Yu; Yang, Hong

    2008-12-24

    Incorporation of organic fertilizers/amendments in soils has been, and will continue to be, a popular strategy for improving the quality of arable soils. However, the mechanism by which the dissolved organic matters (DOMs) affect soil properties or interact with other substances in soils is largely unknown. In this study, a batch equilibrium experiment was performed to evaluate the effect of two types of DOMs on the behavior of prometryne (a herbicide) in soils. Two sorts of DOMs were derived from lakebed sludge (SL) and rice straw (ST), respectively. The results show that sorption capacity in one soil for prometryne was significantly reduced by application of DOMs, whereas desorption of prometryne was promoted by DOM treatments. To understand the mobility behavior of prometryne in soils with DOMs, a column leaching experiment was carried out. It is shown that both DOMs enhanced the solubility and migration of prometryne in soils. To confirm the role of DOMs in regulating the mobility of prometryne in soils, a soil thin-layer chromatography was performed. The migration of prometryne was promoted by DOMs, which were used as a developing solvent or directly incorporated in the soil thin layer. The data indicate that DOM extracts can modify the mobility of prometryne in soil.

  1. Seagrasses are negatively affected by organic matter loading and Arenicola marina activity in a laboratory experiment.

    PubMed

    Govers, Laura L; Pieck, Timon; Bouma, Tjeerd J; Suykerbuyk, Wouter; Smolders, Alfons J P; van Katwijk, Marieke M

    2014-06-01

    When two ecosystem engineers share the same natural environment, the outcome of their interaction will be unclear if they have contrasting habitat-modifying effects (e.g., sediment stabilization vs. sediment destabilization). The outcome of the interaction may depend on local environmental conditions such as season or sediment type, which may affect the extent and type of habitat modification by the ecosystem engineers involved. We mechanistically studied the interaction between the sediment-stabilizing seagrass Zostera noltii and the bioturbating and sediment-destabilizing lugworm Arenicola marina, which sometimes co-occur for prolonged periods. We investigated (1) if the negative sediment destabilization effect of A. marina on Z. noltii might be counteracted by positive biogeochemical effects of bioirrigation (burrow flushing) by A. marina in sulfide-rich sediments, and (2) if previously observed nutrient release by A. marina bioirrigation could affect seagrasses. We tested the individual and combined effects of A. marina presence and high porewater sulfide concentrations (induced by organic matter addition) on seagrass biomass in a full factorial lab experiment. Contrary to our expectations, we did not find an effect of A. marina on porewater sulfide concentrations. A. marina activities affected the seagrass physically as well as by pumping nutrients, mainly ammonium and phosphate, from the porewater to the surface water, which promoted epiphyte growth on seagrass leaves in our experimental set-up. We conclude that A. marina bioirrigation did not alleviate sulfide stress to seagrasses. Instead, we found synergistic negative effects of the presence of A. marina and high sediment sulfide levels on seagrass biomass.

  2. Sorption of dissolved organic matter in salt-affected soils: effect of salinity, sodicity and texture.

    PubMed

    Mavi, Manpreet S; Sanderman, Jonathan; Chittleborough, David J; Cox, James W; Marschner, Petra

    2012-10-01

    Loss of dissolved organic matter (DOM) from soils can have negative effects on soil fertility and water quality. It is known that sodicity increases DOM solubility, but the interactive effect of sodicity and salinity on DOM sorption and how this is affected by soil texture is not clear. We investigated the effect of salinity and sodicity on DOM sorption in soils with different clay contents. Four salt solutions with different EC and SAR were prepared using combinations of 1M NaCl and 1M CaCl(2) stock solutions. The soils differing in texture (4, 13, 24 and 40% clay, termed S-4, S-13, S-24 and S-40) were repeatedly leached with these solutions until the desired combination of EC and SAR (EC(1:5) 1 and 5dSm(-1) in combination with SAR <3 or >20) was reached. The sorption of DOC (derived from mature wheat straw) was more strongly affected by SAR than by EC. High SAR (>20) at EC1 significantly decreased sorption in all soils. However, at EC5, high SAR did not significantly reduce DOC sorption most likely because of the high electrolyte concentration of the soil solution. DOC sorption was greatest in S-24 (which had the highest CEC) at all concentrations of DOC added whereas DOC sorption did not differ greatly between S-40 and S-4 or S-13 (which had higher concentrations of Fe/Al than S-40). DOC sorption in salt-affected soil is more strongly controlled by CEC and Fe/Al concentration than by clay concentration per se except in sodic soils where DOC sorption is low due to the high sodium saturation of the exchange complex. Copyright © 2012 Elsevier B.V. All rights reserved.

  3. Soil compaction and organic matter affect conifer seedling nonmycorrhizal and ectomycorrhizal root tip abundance and diversity.

    Treesearch

    Michael P. Amaranthus; Debbie Page-Dumroese; Al Harvey; Efren Cazares; Larry F. Bednar

    1996-01-01

    Three levels of organic matter removal (bole only; bole and crowns; and bole, crowns, and forest floor) and three levels of mechanical soil compaction (no compaction, moderate compaction, and severe soil compaction) were studied as they influence Douglas-fir (Pseudotsuga menziesii var. glauca (Beissn.) Franco) and western white...

  4. Water and salt extractable organic matter as affected by soil depth and tillage system

    USDA-ARS?s Scientific Manuscript database

    Soluble organic matter (OM) has been suggested to reflect shifts in soil management. We characterized the pool size and properties of soluble OM along a soil profile to 125 cm in a maize-based agricultural system that was managed under conventional tillage (CT) and no-tillage (NT) systems for 23 yea...

  5. Affective and Normative Commitment to Organization, Supervisor, and Coworkers: Do Collectivist Values Matter?

    ERIC Educational Resources Information Center

    Wasti, S. Arzu; Can, Ozge

    2008-01-01

    Employees' commitment to their organization is increasingly recognized as comprising of different bases (affect-, obligation-, or cost-based) and different foci (e.g., supervisor, coworkers). Two studies investigated affective and normative commitment to the organization, supervisor and coworkers in the Turkish context. The results of Study 1…

  6. Affective and Normative Commitment to Organization, Supervisor, and Coworkers: Do Collectivist Values Matter?

    ERIC Educational Resources Information Center

    Wasti, S. Arzu; Can, Ozge

    2008-01-01

    Employees' commitment to their organization is increasingly recognized as comprising of different bases (affect-, obligation-, or cost-based) and different foci (e.g., supervisor, coworkers). Two studies investigated affective and normative commitment to the organization, supervisor and coworkers in the Turkish context. The results of Study 1…

  7. Organic matter amount and types affect sediment microbial community in the Larsen A embayment after ice shelf disintegration

    NASA Astrophysics Data System (ADS)

    Shimizu, M. S.; McCormick, M.; Yoshinaga, M. Y.; Hinrichs, K. U.; Van Dover, C. L.

    2016-02-01

    Climate change can influence seafloor and subseafloor environments by changing the types and amounts of organic material input to sediments, thereby affecting the geochemical characteristics of the sediment porewater and the microbial communities. Global warming in the polar regions likely increases primary productivity on the sea surface and enhances organic matter input into sediments. The Larsen A Embayment in Eastern Antarctic Peninsula has experienced ice shelf disintegration during the past 200 years. The increase in organic matter from the water column after the ice shelf collapse could induce a rapid change in the sedimentation regime, redox status, and subseafloor microbial ecosystems. We collected sediment cores from five stations along a nearshore to offshore transect in the Larsen A embayment in 2012 and analyzed depositional lipid biomarkers and microbial DNA. We found that phytoplankton and bacterial lipids concentrations in the sediments were correlated with the increasing gradient of primary productivity from onshore to offshore of the embayment, and with the lateral transport of organic matter and bioturbation. By using redundancy analysis, we found that relative abundances of labile and phytoplankton originated organic matter positively correlated with relative abundances of chemoheterotrophic bacteria such as Alteromonas, Oceanospirillales, Rhodobacterales, Nitrosomonadales, and Flavobacteriales. The relative abundances of recalcitrant organic matter correlated with relative abundances of sulfate reducers and other chemoheterotrophic bacteria such as Desulfuromonadales, Desulfobacterales, Spirochaetaceae, Bacteroidales. Our results indicate that quality and quantity of organic matter could shape microbial organic matter in sediments. Marine sediment is one of the largest global reservoirs of living microorganisms and the largest sink of organic carbon on Earth. Nevertheless, the impacts of environmental changes on subseafloor microbial

  8. Temperature sensitivity of soil organic matter decomposition was strongly affected by land use under low temperature

    NASA Astrophysics Data System (ADS)

    Zang, Huadong; Blagodatskaya, Evgenia; Xu, Xingliang; Kuzyakov, Yakov

    2017-04-01

    The temperature sensitivity of soil organic matter (SOM) decomposition (often measured as Q10 value) is important for predicting global carbon (C) stocks under warming scenarios. However, the effects of land use and labile substrates on Q10 value remain unclear. We investigated CO2 emission from soils of three land use types (i.e. grassland, cropland and bare fallow) at five temperatures (0, 10, 20, 30 and 40 °C) with or without labile C (14C-glucose) addition. The CO2 efflux from SOM increased with temperature and was 43, 21 and 9 times higher at 40 °C than at 0 °C in grassland, cropland and bare fallow soils, respectively. High temperature strongly increased the cumulative priming effect (PE) in grassland soil (from 0.1 to 4.7 mg g-1 SOC), while the PE in cropland and bare fallow was not sensitive to warming. The Q10 of SOM (2.3-6) was higher at low temperature (0-10 °C) and decreased strongly to Q10 = 1.7-2.0 with temperature increase. The Q10 of SOM in grassland was 1.6 and 2.7 times higher than cropland and bare fallow at low temperature, respectively. Labile C addition decreased the Q10 of SOM in grassland and cropland, but increased it in bare fallow, especially under low temperature. Overall, temperature sensitivity of SOM was strongly affected by land use at low temperature and was relatively stable in high temperature (> 10°C). Labile C addition mainly affected temperature sensitivity of SOM at lower temperature, which decreased in grassland and cropland, and increased in bare fallow. These findings indicate that global warming may result in regionally variable responses in soil respiration, with colder climates being considerably more responsive to increased ambient temperatures.

  9. Transformation of terrestrial organic matter along thermokarst-affected permafrost coasts in the Arctic.

    PubMed

    Tanski, George; Lantuit, Hugues; Ruttor, Saskia; Knoblauch, Christian; Radosavljevic, Boris; Strauss, Jens; Wolter, Juliane; Irrgang, Anna M; Ramage, Justine; Fritz, Michael

    2017-03-01

    The changing climate in the Arctic has a profound impact on permafrost coasts, which are subject to intensified thermokarst formation and erosion. Consequently, terrestrial organic matter (OM) is mobilized and transported into the nearshore zone. Yet, little is known about the fate of mobilized OM before and after entering the ocean. In this study we investigated a retrogressive thaw slump (RTS) on Qikiqtaruk - Herschel Island (Yukon coast, Canada). The RTS was classified into an undisturbed, a disturbed (thermokarst-affected) and a nearshore zone and sampled systematically along transects. Samples were analyzed for total and dissolved organic carbon and nitrogen (TOC, DOC, TN, DN), stable carbon isotopes (δ(13)C-TOC, δ(13)C-DOC), and dissolved inorganic nitrogen (DIN), which were compared between the zones. C/N-ratios, δ(13)C signatures, and ammonium (NH4-N) concentrations were used as indicators for OM degradation along with biomarkers (n-alkanes, n-fatty acids, n-alcohols). Our results show that OM significantly decreases after disturbance with a TOC and DOC loss of 77 and 55% and a TN and DN loss of 53 and 48%, respectively. C/N-ratios decrease significantly, whereas NH4-N concentrations slightly increase in freshly thawed material. In the nearshore zone, OM contents are comparable to the disturbed zone. We suggest that the strong decrease in OM is caused by initial dilution with melted massive ice and immediate offshore transport via the thaw stream. In the mudpool and thaw stream, OM is subject to degradation, whereas in the slump floor the nitrogen decrease is caused by recolonizing vegetation. Within the nearshore zone of the ocean, heavier portions of OM are directly buried in marine sediments close to shore. We conclude that RTS have profound impacts on coastal environments in the Arctic. They mobilize nutrients from permafrost, substantially decrease OM contents and provide fresh water and nutrients at a point source.

  10. Characterizing Soil Organic Matter Degradation Levels in Permafrost-affected Soils using Infrared Spectroscopy

    NASA Astrophysics Data System (ADS)

    Matamala, R.; Jastrow, J. D.; Calderon, F.; Liang, C.; Miller, R. M.; Ping, C. L.; Michaelson, G. J.; Hofmann, S.

    2014-12-01

    Diffuse-reflectance Fourier-transform mid-infrared spectroscopy (MidIR) was used to (1) investigate soil quality along a latitudinal gradient of Alaskan soils, and in combination with soil incubations, (2) to assess the relative lability of soil organic matter in the active layer and upper permafrost for some of those soils. Twenty nine sites were sampled along a latitudinal gradient (78.79 N to 55.35 N deg). The sites included 8 different vegetation types (moss/lichen, non-acidic and acidic tundra, shrub areas, deciduous forests, mixed forests, coniferous forests, and grassland). At each site, soils were separated by soil horizons and analyzed for pH, cation exchange capacity (CEC), organic and inorganic C, and total N. Samples were also scanned to obtain MidIR spectra, and ratios of characteristic bands previously suggested as indicators of organic matter quality or degradation level were calculated. Principal component analysis showed that axis 1 explained 70% of the variation and was correlated with the general Organic:Mineral ratio, soil organic C, total N, and CEC, but not with vegetation type. Axis 2 explained 25% of the variation and was correlated with most of the band ratios, with negative values for the condensation index (ratio of aromatic to aliphatic organic matter) and positive values for all humification ratios (HU1: ratio of aliphatic to polysaccharides; HU2: ratio of aromatics to polysaccharides; and HU3 ratio of lignin/phenols to polysaccharides) suggesting that axis 2 variations were related to differences in level of soil organic matter degradation. Active organic, active mineral and permafrost layers from selected tundra sites were incubated for two months at -1, 1, 4, 8 and 16 ⁰C. The same band ratios were correlated with total CO2 mineralized during the incubations. Data from 4⁰C showed that the cumulative respired CO2 from the active organic layer across all sites was negatively correlated with the HU1 humification ratio, suggesting

  11. The sorption characteristics of mercury as affected by organic matter content and/or soil properties

    NASA Astrophysics Data System (ADS)

    Šípková, Adéla; Šillerová, Hana; Száková, Jiřina

    2014-05-01

    The determination and description of the mercury sorption extend on soil is significant for potential environmental toxic effects. The aim of this study was to assess the effectiveness of mercury sorption at different soil samples and vermicomposts. Mercury interactions with soil organic matter were studied using three soils with different physical-chemical properties - fluvisol, cambisol, and chernozem. Moreover, three different vermicomposts based on various bio-waste materials with high organic matter content were prepared in special fermentors. First was a digestate, second was represented by a mixture of bio-waste from housing estate and woodchips, and third was a garden bio-waste. In the case of vermicompost, the fractionation of organic matter was executed primarily using the resin SuperliteTM DAX-8. Therefore, the representation of individual fractions (humic acid, fulvic acid, hydrophilic compounds, and hydrophobic neutral organic matter) was known. The kinetics of mercury sorption onto materials of interest was studied by static sorption experiments. Samples were exposed to the solution with known Hg concentration of 12 mg kg-1 for the time from 10 minutes to 24 hours. Mercury content in the solutions was measured by the inductively coupled plasma mass spectrometry (ICP-MS). Based on this data, the optimum conditions for following sorption experiments were chosen. Subsequently, the batch sorption tests for all soil types and vermicomposts were performed in solution containing variable mercury concentrations between 1 and 12 mg kg-1. Equilibrium concentration values measured in the solution after sorption and calculated mercury content per kilogram of the soil or the vermi-compost were plotted. Two basic models of sorption isotherm - Langmuir and Freundlich, were used for the evaluation of the mercury sorption properties. The results showed that the best sorption properties from studied soil were identified in chernozem with highest cation exchange

  12. Organic matter protection as affected by the mineral soil matrix: allophanic vs. non-allophanic volcanic ash soils

    NASA Astrophysics Data System (ADS)

    Nierop, K. G. J.; Kaal, J.; Jansen, B.; Naafs, D. F. W.

    2009-04-01

    Volcanic ash soils (Andosols) contain the largest amounts of organic carbon of all mineral soil types. Chemical (complexes of organic matter with allophane, Al/Fe) and physical (aggregation) mechanisms are protecting the carbon from decomposition. While allophanic Andosols are dominated by short range order minerals such as allophane, imogolite and ferrihydrite, organic matter-Al/Fe complexes dominate non-allophanic Andosols. Consequently, chemical interactions between the mineral soil matrix and organic matter differ between these two soil types. This difference could potentially lead to different organic matter compositions. In this study, the organic matter of Ah horizons of an allophanic Andosol with a non-allophanic Andosol from Madeira Island is compared using analytical pyrolysis. Both volcanic soil types showed a relative decrease of lignin-derived pyrolysis products with depth, but this decrease was more pronounced in the allophanic Andosol. Polysaccharides were more abundant in the allophanic Ah horizon, particularly at lower depth, and this was also the case for the non-plant-derived N-containing polysaccharide chitin. Most likely, these biopolymers are adsorbed onto short range order minerals such as allophane and therefore were better protected in the allophanic Andosol. In addition, the higher chitin contents combined with the more pronounced lignin degradation suggests a higher fungal activity. Aliphatic pyrolysis products (n-alkenes/n-alkanes, fatty acids) were relatively more enriched in the non-allophanic Andosol. Lower microbial activity caused by the more acidic pH and higher levels of (toxic) aluminium are the most plausible reasons for the accumulation of these compounds in the non-allophanic Andosol. Although the allophanic and non-allophanic Andosol resembled each other in containing biopolymer groups of the same orders of magnitudes, in particular the contents of chitin and aliphatic compounds were distinctly affected by the differences in

  13. Salinity affects microbial activity and soil organic matter content in tidal wetlands.

    PubMed

    Morrissey, Ember M; Gillespie, Jaimie L; Morina, Joseph C; Franklin, Rima B

    2014-04-01

    Climate change-associated sea level rise is expected to cause saltwater intrusion into many historically freshwater ecosystems. Of particular concern are tidal freshwater wetlands, which perform several important ecological functions including carbon sequestration. To predict the impact of saltwater intrusion in these environments, we must first gain a better understanding of how salinity regulates decomposition in natural systems. This study sampled eight tidal wetlands ranging from freshwater to oligohaline (0-2 ppt) in four rivers near the Chesapeake Bay (Virginia). To help isolate salinity effects, sites were selected to be highly similar in terms of plant community composition and tidal influence. Overall, salinity was found to be strongly negatively correlated with soil organic matter content (OM%) and C : N, but unrelated to the other studied environmental parameters (pH, redox, and above- and below-ground plant biomass). Partial correlation analysis, controlling for these environmental covariates, supported direct effects of salinity on the activity of carbon-degrading extracellular enzymes (β-1, 4-glucosidase, 1, 4-β-cellobiosidase, β-D-xylosidase, and phenol oxidase) as well as alkaline phosphatase, using a per unit OM basis. As enzyme activity is the putative rate-limiting step in decomposition, enhanced activity due to salinity increases could dramatically affect soil OM accumulation. Salinity was also found to be positively related to bacterial abundance (qPCR of the 16S rRNA gene) and tightly linked with community composition (T-RFLP). Furthermore, strong relationships were found between bacterial abundance and/or composition with the activity of specific enzymes (1, 4-β-cellobiosidase, arylsulfatase, alkaline phosphatase, and phenol oxidase) suggesting salinity's impact on decomposition could be due, at least in part, to its effect on the bacterial community. Together, these results indicate that salinity increases microbial decomposition rates

  14. NITROGEN DEPOSITION AND ORGANIC MATTER MANIPULATIONS AFFECT GROSS AND NET NITROGEN TRANSFORMATIONS IN TWO TEMPERATE FORESTS SOILS

    EPA Science Inventory

    Soil nitrogen transformations are intricately linked to carbon transformations. We utilized two existing organic matter manipulation sites in western Oregon, USA and Hungary to investigate these linkages. Our questions were: 1) Does the quantity and quality of organic matter af...

  15. NITROGEN DEPOSITION AND ORGANIC MATTER MANIPULATIONS AFFECT GROSS AND NET NITROGEN TRANSFORMATIONS IN TWO TEMPERATE FORESTS SOILS

    EPA Science Inventory

    Soil nitrogen transformations are intricately linked to carbon transformations. We utilized two existing organic matter manipulation sites in western Oregon, USA and Hungary to investigate these linkages. Our questions were: 1) Does the quantity and quality of organic matter af...

  16. How does pyrogenic organic matter affect the N dynamic in agricultural soils? An incubation study

    NASA Astrophysics Data System (ADS)

    de La Rosa, José M.; Knicker, Heike

    2010-05-01

    Besides other environmental factors, N availability drives the carbon (C) and nitrogen (N) cycles in grasslands. Since grass-dominated ecosystems cover approximately 40% of the terrestrial surface and store more than 30% of global soil organic carbon (SOC), alterations to those ecosystems could have significant consequences and potential implications for global C and N cycles and climate (Schlesinger et al., 1990). Understanding the processes that govern the efficient cycling of nutrients through soil/plant systems remains an important topic to underpin the choice of strategies aimed at ensuring the long-term sustainability of ecosystems. In Mediterranean ecosystems, wild-fires occur frequently. Whereas factors such as water shortage or erosion contribute to reduced N-availability by lowering the litter input, burning additionally increase the refractory N and C-pools by charring litter and humic material (charred pyrogenic organic matter-PyOM) (Gonzalez-Pérez, 2004). In general, the addition of organic matter either as plant residues or farmyard manure has been shown to significantly increase biological activity, microbial biomass and enzyme activity in soil (Dick, 1992). Even in situations where microbial biomass appears to be unaffected, the activity of specific processes (e.g. N mineralization) can be significantly influenced by the addition of organic residues). However, little is known about the changes of the N cycle caused by the addition of PyOM. Therefore, the interest of our research was to study the impact of 15N enriched-biochars either alone or in conjunction with a 15N enriched fertilizer (K15NO3) on aggregate stability and organic carbon (C) and nitrogen (N) distribution among the different soil fractions. The latter may help to elucidate both, the quality of the stored organic matter and if the accumulation is related to interaction with the mineral matter. Therefore, biochar derived from grass material grown on 15N-enriched fertilizer was added

  17. Aging and soil organic matter content affect the fate of silver nanoparticles in soil.

    PubMed

    Coutris, Claire; Joner, Erik Jautris; Oughton, Deborah Helen

    2012-03-15

    Sewage sludge application on soils represents an important potential source of silver nanoparticles (Ag NPs) to terrestrial ecosystems, and it is thus important to understand the fate of Ag NPs once in contact with soil components. Our aim was to compare the behavior of three different forms of silver, namely silver nitrate, citrate stabilized Ag NPs (5nm) and uncoated Ag NPs (19nm), in two soils with contrasting organic matter content, and to follow changes in binding strength over time. Soil samples were spiked with silver and left to age for 2h, 2 days, 5 weeks or 10 weeks before they were submitted to sequential extraction. The ionic silver solution and the two Ag NP types were radiolabeled so that silver could be quantified by gamma spectrometry by measuring the (110m)Ag tracer in the different sequential extraction fractions. Different patterns of partitioning of silver were observed for the three forms of silver. All types of silver were more mobile in the mineral soil than in the soil rich in organic matter, although the fractionation patterns were very different for the three silver forms in both cases. Over 20% of citrate stabilized Ag NPs was extractible with water in both soils the first two days after spiking (compared to 1-3% for AgNO(3) and uncoated Ag NPs), but the fraction decreased to trace levels thereafter. Regarding the 19nm uncoated Ag NPs, 80% was not extractible at all, but contrary to AgNO(3) and citrate stabilized Ag NPs, the bioaccessible fraction increased over time, and by day 70 was between 8 and 9 times greater than that seen in the other two treatments. This new and unexpected finding demonstrates that some Ag NPs can act as a continuous source of bioaccessible Ag, while AgNO(3) is rapidly immobilized in soil.

  18. Particulate Organic Matter Affects Soil Nitrogen Mineralization under Two Crop Rotation Systems.

    PubMed

    Bu, Rongyan; Lu, Jianwei; Ren, Tao; Liu, Bo; Li, Xiaokun; Cong, Rihuan

    2015-01-01

    Changes in the quantity and/or quality of soil labile organic matter between and after different types of cultivation system could play a dominant role in soil nitrogen (N) mineralization. The quantity and quality of particulate organic matter (POM) and potentially mineralizable-N (PMN) contents were measured in soils from 16 paired rice-rapeseed (RR)/cotton-rapeseed (CR) rotations sites in Hubei province, central China. Then four paired soils encompassing low (10th percentile), intermediate (25th and 75th percentiles), and high (90th percentile) levels of soil PMN were selected to further study the effects of POM on soil N mineralization by quantifying the net N mineralization in original soils and soils from which POM was removed. Both soil POM carbon (POM-C) and N (POM-N) contents were 45.8% and 55.8% higher under the RR rotation compared to the CR rotation, respectively. The PMN contents were highly correlated with the POM contents. The PMN and microbial biomass N (MBN) contents concurrently and significantly decreased when POM was removed. The reduction rate of PMN was positively correlated with changes in MBN after the removal of POM. The reduction rates of PMN and MBN after POM removal are lower under RR rotations (38.0% and 16.3%, respectively) than CR rotations (45.6% and 19.5%, respectively). Furthermore, infrared spectroscopy indicated that compounds with low-bioavailability accumulated (e.g., aromatic recalcitrant materials) in the soil POM fraction under the RR rotation but not under the CR rotation. The results of the present study demonstrated that POM plays a vital role in soil N mineralization under different rotation systems. The discrepancy between POM content and composition resulting from different crop rotation systems caused differences in N mineralization in soils.

  19. Particulate Organic Matter Affects Soil Nitrogen Mineralization under Two Crop Rotation Systems

    PubMed Central

    Bu, Rongyan; Lu, Jianwei; Ren, Tao; Liu, Bo; Li, Xiaokun; Cong, Rihuan

    2015-01-01

    Changes in the quantity and/or quality of soil labile organic matter between and after different types of cultivation system could play a dominant role in soil nitrogen (N) mineralization. The quantity and quality of particulate organic matter (POM) and potentially mineralizable-N (PMN) contents were measured in soils from 16 paired rice-rapeseed (RR)/cotton-rapeseed (CR) rotations sites in Hubei province, central China. Then four paired soils encompassing low (10th percentile), intermediate (25th and 75th percentiles), and high (90th percentile) levels of soil PMN were selected to further study the effects of POM on soil N mineralization by quantifying the net N mineralization in original soils and soils from which POM was removed. Both soil POM carbon (POM-C) and N (POM-N) contents were 45.8% and 55.8% higher under the RR rotation compared to the CR rotation, respectively. The PMN contents were highly correlated with the POM contents. The PMN and microbial biomass N (MBN) contents concurrently and significantly decreased when POM was removed. The reduction rate of PMN was positively correlated with changes in MBN after the removal of POM. The reduction rates of PMN and MBN after POM removal are lower under RR rotations (38.0% and 16.3%, respectively) than CR rotations (45.6% and 19.5%, respectively). Furthermore, infrared spectroscopy indicated that compounds with low-bioavailability accumulated (e.g., aromatic recalcitrant materials) in the soil POM fraction under the RR rotation but not under the CR rotation. The results of the present study demonstrated that POM plays a vital role in soil N mineralization under different rotation systems. The discrepancy between POM content and composition resulting from different crop rotation systems caused differences in N mineralization in soils. PMID:26647157

  20. [Inhibitory effect of DMPP on soil nitrification as affected by soil moisture content, pH and organic matter].

    PubMed

    Xue, Yan; Wu, Zhi-Jie; Zhang, Li-Li; Gong, Ping; Dong, Xin-Xin; Nie, Yan-Xia

    2012-10-01

    A laboratory incubation test with meadow brown soil was conducted to study the inhibitory effect of 3,4-dimethylpyrazole phosphate (DMPP) on soil nitrification as affected by soil moisture content (40%, 60% and 80% of the maximum field capacity), pH (4, 7 and 10), and organic matter (retained and removal). With the decrease of soil moisture content, the degradation of DMPP in soil tended to slow down, and the oxidation of soil NH4+ was more inhibited. At pH 10, more DMPP was remained in soil, and had the greatest inhibitory effect; at pH 7 and pH 4, the DMPP was lesser remained, with a smaller inhibitory effect. The removal of organic matter prolonged the remaining time of DMPP in soil, and decreased the apparent soil nitrification rate significantly.

  1. Metal leaching from MSWI bottom ash as affected by salt or dissolved organic matter.

    PubMed

    Olsson, S; Gustafsson, J P; Kleja, D Berggren; Bendz, D; Persson, I

    2009-02-01

    In order to manage municipal solid waste incineration (MSWI) bottom ash safely, risk assessments, including the prediction of leaching under different field conditions, are necessary. In this study, the influence of salt or dissolved organic matter (DOM) in the influent on metal leaching from MSWI bottom ash was investigated in a column experiment. The presence of salt (0.1M NaCl) resulted in a small increase of As leaching, whereas no impact on leachate concentration was found when lakewater DOM (35.1mg/l dissolved organic carbon) was added. Most of the added DOM was retained within the material. Further, X-ray spectroscopy revealed that Cu(II) was the dominating form of Cu and that it probably occurred as a CuO-type mineral. The Cu(2+) activity in the MSWI bottom ash leachate was most likely determined by the dissolution of CuO together with the formation of Cu-DOM complexes and possibly also by adsorption to (hydr)oxide minerals. The addition of lake DOM in the influent resulted in lower saturation indices for CuO in the leachates, which may be due to slow CuO dissolution kinetics in combination with strong Cu-DOM complexation.

  2. Comparison of organic matter composition in agricultural versus forest affected headwaters with special emphasis on organic nitrogen.

    PubMed

    Heinz, Marlen; Graeber, Daniel; Zak, Dominik; Zwirnmann, Elke; Gelbrecht, Joerg; Pusch, Martin T

    2015-02-17

    Agricultural management practices promote organic matter (OM) turnover and thus alter both the processing of dissolved organic matter (DOM) in soils and presumably also the export of DOM to headwater streams, which intimately connect the terrestrial with the aquatic environment. Size-exclusion chromatography, in combination with absorbance and emission matrix fluorometry, was applied to assess how agricultural land use alters the amount and composition of DOM, as well as dissolved organic nitrogen (DON) forms in headwater streams, including temporal variations, in a temperate region of NE Germany. By comparing six agriculturally and six forest-impacted headwater streams, we demonstrated that agriculture promotes increased DOC and DON concentrations, entailing an even more pronounced effect on DON. The major part of DOC and DON in agricultural and forest reference streams is exported in the form of humic-like material with high molecular weight, which indicates terrestrial, i.e., allochthonous sources. As an obvious difference in agricultural streams, the contribution of DOC and particularly DON occurring in the form of nonhumic high-molecular-weight, presumably proteinous material is clearly elevated. Altogether, DOM in agricultural headwaters is mainly complex-soil-derived and aromatic material with a low C:N ratio, which is more microbial processed than its counterpart from forest reference catchments. Our results emphasize the importance of agricultural land use on DOM loss from soils and identify agricultural soils as important DOC and particularly DON sources to headwater streams.

  3. Colloidal behavior of aluminum oxide nanoparticles as affected by pH and natural organic matter.

    PubMed

    Ghosh, Saikat; Mashayekhi, Hamid; Pan, Bo; Bhowmik, Prasanta; Xing, Baoshan

    2008-11-04

    The colloidal behavior of aluminum oxide nanoparticles (NPs) was investigated as a function of pH and in the presence of two structurally different humic acids (HAs), Aldrich HA (AHA) and the seventh HA fraction extracted from Amherst peat soil (HA7). Dynamic light scattering (DLS) and atomic force microscopy (AFM) were employed to determine the colloidal behavior of the NPs. Influence of pH and HAs on the surface charges of the NPs was determined. zeta-Potential data clearly showed that the surface charge of the NPs decreased with increasing pH and reached the point of zero charge (ZPC) at pH 7.9. Surface charge of the NPs also decreased with the addition of HAs. The NPs tend to aggregate as the pH of the suspension approaches ZPC, where van der Waals attraction forces dominate over electrostatic repulsion. However, the NP colloidal suspension was stable in the pHs far from ZPC. Colloidal stability was strongly enhanced in the presence of HAs at the pH of ZPC or above it, but in acidic conditions NPs showed strong aggregation in the presence of HAs. AFM imaging revealed the presence of long-chain fractions in HA7, which entangled with the NPs to form large aggregates. The association of HA with the NP surface can be assumed to follow a two-step process, possibly the polar fractions of the HA7 sorbed on the NP surface followed by entanglement with the long-chain fractions. Thus, our study demonstrated that the hydrophobic nature of the HA molecules strongly influenced the aggregation of colloidal NPs, possibly through their conformational behavior in a particular solution condition. Therefore, various organic matter samples will result in different colloidal behavior of NPs, subsequently their environmental fate and transport.

  4. Factors affecting the isotopic composition of organic matter. (1) Carbon isotopic composition of terrestrial plant materials.

    PubMed

    Yeh, H W; Wang, W M

    2001-07-01

    The stable isotope composition of the light elements (i.e., H, C, N, O and S) of organic samples varies significantly and, for C, is also unique and distinct from that of inorganic carbon. This is the result of (1) the isotope composition of reactants, (2) the nature of the reactions leading to formation and post-formational modification of the samples, (3) the environmental conditions under which the reactions took place, and (4) the relative concentration of the reactants compared to that of the products (i.e., [products]/[reactants] ratio). This article will examine the carbon isotope composition of terrestrial plant materials and its relationship with the above factors. delta13C(PDB) values of terrestrial plants range approximately from -8 to -38%, inclusive of C3-plants (-22 to -38%), C4-plants (-8 to -15%) and CAM-plants (-13 to -30%). Thus, the delta13C(PDB) values largely reflect the photosynthesis pathways of a plant as well as the genetics (i.e., species difference), delta13C(PDB) values of source CO2, relevant humidity, CO2/O2 ratios, wind and light intensity etc. Significant variations in these values also exist among different tissues, different portions of a tissue and different compounds. This is mainly a consequence of metabolic reactions. Animals mainly inherit the delta13C(PDB) values of the foods they consume; therefore, their delta13C(PDB) values are similar. The delta13C(PDB) values of plant materials, thus, contain information regarding the inner workings of the plants, the environmental conditions under which they grow, the delta13C(PDB) values of CO2 sources etc., and are unique. Furthermore, this uniqueness is passed on to their derivative matter, such as animals, humus etc. Hence, they are very powerful tools in many areas of research, including the ecological and environmental sciences.

  5. Does nitrogen deposition affect plant-derived and microbial organic matter compounds differently?

    NASA Astrophysics Data System (ADS)

    Heim, Alexander; Hagedorn, Frank; Schmidt, Michael W. I.

    2010-05-01

    type on concentrations both of plant biomarkers and of microbial biomarkers. A significant shift in the ratio between these biomarkers would be indicative of major changes in the carbon fluxes within the soil system. Localization of the labeled biomarkers in specific soil fractions will identify the soil compartments where important changes occur. This information may be used to test current hypotheses on organic matter stabilization mechanisms in soil. The project plan and first results will be presented.

  6. Denitrification potential and organic matter as affected by vegetation community, wetland age, and plant introduction in created wetlands.

    PubMed

    Hernandez, Maria E; Mitsch, William J

    2007-01-01

    Denitrification potential (DP) and organic matter (OM) in soils were compared in three different vegetation communities-emergent macrophyte, open water, and forested edge-in two 10-yr-old created riverine wetlands. Organic matter, cold water-extractable organic matter (CWEOM), anaerobic mineralizable carbon (AnMC), and DP varied significantly (P<0.05) among vegetation communities. The surface (0 to 9 cm) soils in the emergent macrophyte community (EMC) showed highest DP (0.07+/-0.01 mg N h-1 kg-1), OM (84.90+/-5.60 g kg-1), CWEOM (1.12+/-0.20 g kg-1), and AnMC (1.50+/-0.10 mg C h-1 kg-1). In the deeper layer (9 to 18 cm), DP and CWEOM (0.04+/-0.01 mg N h-1 kg-1 and 1.13+/-0.20 g kg-1, respectively) were significantly higher in the open water community (OWC) than in the emergent macrophyte and forested edge communities. Plant introduction did not affect DP or OM content and characteristics. After 10 yr of wetland development, mean DP increased 25-fold in the surface layer (from 0.002 to 0.053 mg N h-1 kg-1); OM content more than doubled to 90.80+/-19.22 g kg-1, and CWEOM and HWEOM increased 2.5 and 2.7 times respectively from 1993 (prewetland conditions) to 2004. Humic acids were the most abundant form of OM in 2004 and 1993 samples. Significant (P<0.05) positive relationships between DP and OM, CWEOM, and AnMC were found in the surface layer; in the 9- to 18-cm layer, significant positive relationships were found between DP and CWEOM and AnMC.

  7. Soil organic matter and salinity affect copper bioavailability in root zone and uptake by Vicia faba L. plants.

    PubMed

    Matijevic, Lana; Romic, Davor; Romic, Marija

    2014-10-01

    Processes that control the mobility, transformation and toxicity of metals in soil are of special importance in the root-developing zone. For this reason, there is a considerable interest in understanding trace elements (TEs) behavior in soil, emphasising the processes by which plants take them up. Increased root-zone salinity can affect plant TEs uptake and accumulation in plant tissue. Furthermore, copper (Cu) complexation by soil organic matter (SOM) is an effective mechanism of Cu retention in soils, controlling thus its bioavailability. Therefore, a greenhouse pot experiment was conducted to study the effects of soil Cu contamination in a saline environment on faba bean (Vicia faba L.) element uptake. Treatment with NaCl salinity was applied (control, 50 mM NaCl and 100 mM NaCl) on faba bean plants grown in a control and in a soil spiked with Cu (250 and 500 mg kg(-1)). Low and high SOM content trial variants were studied. Cu accumulation occurred in faba bean leaf, pod and seed. Cu contamination affected plant element concentrations in leaves (Na, Ca, Mg, Mn), pod (Zn, Mn) and seed (Mn, Mo, Zn). Root-zone salinity also affected faba bean element concentrations. Furthermore, Cu contamination-salinity and salinity-SOM interactions were significant for pod Cu concentration, suggesting that Cu phytoavailability could be affected by these interactions. Future research will be focused on the mechanisms of Cu translocation in plant and adaptation aspects of abiotic stress.

  8. Factors affecting fluoride and natural organic matter (NOM) removal from natural waters in Tanzania by nanofiltration/reverse osmosis.

    PubMed

    Shen, Junjie; Schäfer, Andrea I

    2015-09-15

    This study examined the feasibility of nanofiltration (NF) and reverse osmosis (RO) in treating challenging natural tropical waters containing high fluoride and natural organic matter (NOM). A total of 166 water samples were collected from 120 sources within northern Tanzania over a period of 16 months. Chemical analysis showed that 81% of the samples have fluoride levels exceeding the WHO drinking guideline of 1.5mg/L. The highest fluoride levels were detected in waters characterized by high ionic strength, high inorganic carbon and on some occasions high total organic carbon (TOC) concentrations. Bench-scale experiments with 22 representative waters (selected based on fluoride concentration, salinity, origin and in some instances organic matter) and 6 NF/RO membranes revealed that ionic strength and recovery affected fluoride retention and permeate flux. This is predominantly due to osmotic pressure and hence the variation of diffusion/convection contributes to fluoride transport. Different membranes had distinct fluoride removal capacities, showing different raw water concentration treatability limits regarding the WHO guideline compliance. BW30, BW30-LE and NF90 membranes had a feed concentration limit of 30-40 mg/L at 50% recovery. NOM retention was independent of water matrices but is governed predominantly by size exclusion. NOM was observed to have a positive impact on fluoride removal. Several mechanisms could contribute but further studies are required before a conclusion could be drawn. In summary, NF/RO membranes were proved to remove both fluoride and NOM reliably even from the most challenging Tanzanian waters, increasing the available drinking water sources. Copyright © 2015 Elsevier B.V. All rights reserved.

  9. Quality of dissolved organic matter affects planktonic but not biofilm bacterial production in streams.

    PubMed

    Kamjunke, Norbert; Herzsprung, Peter; Neu, Thomas R

    2015-02-15

    Streams and rivers are important sites of organic carbon mineralization which is dependent on the land use within river catchments. Here we tested whether planktonic and epilithic biofilm bacteria differ in their response to the quality of dissolved organic carbon (DOC). Thus, planktonic and biofilm bacterial production was compared with patterns of DOC along a land-use gradient in the Bode catchment area (Germany). The freshness index of DOC was positively related to the proportion of agricultural area in the catchment. The humification index correlated with the proportion of forest area. Abundance and production of planktonic bacteria were lower in headwaters than at downstream sites. Planktonic production was weakly correlated to the total concentration of DOC but more strongly to quality-measures as revealed by spectra indexes, i.e. positively to the freshness index and negatively to the humification index. In contrast to planktonic bacteria, abundance and production of biofilm bacteria were independent of DOC quality. This finding may be explained by the association of biofilm bacteria with benthic algae and an extracellular matrix which represent additional substrate sources. The data show that planktonic bacteria seem to be regulated at a landscape scale controlled by land use, whereas biofilm bacteria are regulated at a biofilm matrix scale controlled by autochthonous production. Thus, the effects of catchment-scale land use changes on ecosystem processes are likely lower in small streams dominated by biofilm bacteria than in larger streams dominated by planktonic bacteria. Copyright © 2014 Elsevier B.V. All rights reserved.

  10. Biochar affects soil organic matter cycling and microbial functions but does not alter microbial community structure in a paddy soil.

    PubMed

    Tian, Jing; Wang, Jingyuan; Dippold, Michaela; Gao, Yang; Blagodatskaya, Evgenia; Kuzyakov, Yakov

    2016-06-15

    The application of biochar (BC) in conjunction with mineral fertilizers is one of the most promising management practices recommended to improve soil quality. However, the interactive mechanisms of BC and mineral fertilizer addition affecting microbial communities and functions associated with soil organic matter (SOM) cycling are poorly understood. We investigated the SOM in physical and chemical fractions, microbial community structure (using phospholipid fatty acid analysis, PLFA) and functions (by analyzing enzymes involved in C and N cycling and Biolog) in a 6-year field experiment with BC and NPK amendment. BC application increased total soil C and particulate organic C for 47.4-50.4% and 63.7-74.6%, respectively. The effects of BC on the microbial community and C-cycling enzymes were dependent on fertilization. Addition of BC alone did not change the microbial community compared with the control, but altered the microbial community structure in conjunction with NPK fertilization. SOM fractions accounted for 55% of the variance in the PLFA-related microbial community structure. The particulate organic N explained the largest variation in the microbial community structure. Microbial metabolic activity strongly increased after BC addition, particularly the utilization of amino acids and amines due to an increase in the activity of proteolytic (l-leucine aminopeptidase) enzymes. These results indicate that microorganisms start to mine N from the SOM to compensate for high C:N ratios after BC application, which consequently accelerate cycling of stable N. Concluding, BC in combination with NPK fertilizer application strongly affected microbial community composition and functions, which consequently influenced SOM cycling.

  11. Antecedent soil moisture prior to freezing can affect quantity, composition and stability of soil dissolved organic matter during thaw.

    PubMed

    Wu, Haohao; Xu, Xingkai; Cheng, Weiguo; Fu, Pingqing; Li, Fayun

    2017-07-25

    There are large amounts of dissolved organic matter (DOM) released into the soil during spring thaw, but its bioavailability and components are still unknown. The quantity, composition and stability of DOM in water extracts of forest soils during thaw were studied after two-month freezing with 9 levels of soil moisture ranging from 10% to 90% water-filled pore space (WFPS), by measuring soil carbon dioxide (CO2) flux, biodegradable dissolved organic carbon (BDOC) and nitrogen (BDON), ultraviolet absorbance and parallel factor analysis of fluorescence excitation-emission matrices. Concentrations of BDOC, BDON, DOC and DON were lowest around 30% WFPS and relatively higher and lower soil moisture both increased DOM and BDOM concentrations in thawing soil. With increasing WFPS, the dominant component of soil DOM changed from humic acid-like substances to fulvic acid-like substances and the biological origin of DOM increased gradually. The protein-like component accounted for 8-20% of soil DOM and was affected by vegetation type and WFPS singly and interactively. The results implied that forest soils with more than 50% WFPS before winter freezing could release large amounts of fulvic acid-like DOM, which would be easily biodegraded and emitted as CO2 or run off with ground water during spring snow thaw.

  12. REACH-SCALE GEOMORPHOLOGY AFFECTS ORGANIC MATTER AND CONSUMER Ä 13C IN A FORESTED PIEDMONT STREAM

    EPA Science Inventory

    We investigated seasonal (spring, autumn) and spatial variation of stream organic matter and consumer δ 13C in a Piedmont stream. Sites were sampled along a continuum and fit into two geomorphic categories: high-gradient, rock-bed ("rock") or low-gradient, sand-bed...

  13. Is old organic matter simple organic matter?

    NASA Astrophysics Data System (ADS)

    Nunan, Naoise; Lerch, Thomas; Pouteau, Valérie; Mora, Philippe; Changey, Fréderique; Kätterer, Thomas; Herrmann, Anke

    2016-04-01

    Bare fallow soils that have been deprived of fresh carbon inputs for prolonged periods contain mostly old, stable organic carbon. In order to shed light on the nature of this carbon, the functional diversity profiles (MicroResp™, Biolog™ and enzyme activity spectra) of the microbial communities of long-term barefallow soils were analysed and compared with those of the microbial communities from their cultivated counterparts. The study was based on the idea that microbial communities adapt to their environment and that therefore the catabolic and enzymatic profiles would reflect the type of substrates available to the microbial communities. The catabolic profiles suggested that the microbial communities in the long-term bare-fallow soil were exposed to a less diverse range of substrates and that these substrates tended to be of simpler molecular forms. Both the catabolic and enzyme activity profiles suggested that the microbial communities from the long-term bare-fallow soils were less adapted to using polymers. These results do not fit with the traditional view of old, stable carbon being composed of complex, recalcitrant polymers. An energetics analysis of the substrate use of the microbial communities for the different soils suggested that the microbial communities from the long-term bare-fallow soils were better adapted to using readily oxidizable,although energetically less rewarding, substrates. Microbial communities appear to adapt to the deprivation of fresh organic matter by using substrates that require little investment.

  14. How mycorrhizal plant-soil interactions affect formation and degradation of soil organic matter in boreal forest

    NASA Astrophysics Data System (ADS)

    Adamczyk, Bartosz; Sietiö, Outi-Maaria; Ahvenainen, Anu; Strakova, Petra; Heinonsalo, Jussi

    2017-04-01

    Forest soil organic matter (SOM) contains more carbon (C) than all the flora and atmosphere combined and that is why C release as CO2 from SOM may have drastic consequences for climate globally. SOM is enormous C sink which has the potential to become C source (IPCC 2013). To predict long-term soil C storage and climate feedbacks we need profound understanding of dynamics and drivers of SOM decomposition. Ecosystem processes associated with C cycle are constrained by C and N interactions. At the level of ecosystem boreal forest is N-limited, as most of soil N is stored in recalcitrant organic form bound or complexed with soil compounds such as polyphenols. To improve N uptake, also from less available pools, plant species form symbioses with mycorrhizal fungi able to degrade recalcitrant N and sharing it with plants. As a feedback, plants provide to fungal symbiont assimilated C. Climate change through elevated CO2 level led to increases in photosynthesis which enhance the C flow belowground accelerating N uptake by plants also from more recalcitrant N pools. Increased SOM decomposition would possibly result also in increase of CO2 production from soil. Our field experiment was conducted at Hyytiälä forestry field station (SMEAR II, University of Helsinki) located in southern Finland (61°84'N, 24°26'E). In this 3-year long experiment, we discriminated SOM decomposition with different mesh bags filled with humus. These mesh bags allowed for the entrance of mycorrhiza and fine roots (1mm mesh size), or only mycorrhiza (50µm), or both were excluded (1µm). We followed changes in SOM content, N pools and enzymatic activity. The results suggests that plant-mycorrhiza interactions increase recalcitrant pool of organic N in SOM due to root-derived tannins, but mycorrhizal plants have still access to this N. Although mycorrhizal plant-soil interaction seems to strongly affect the formation of recalcitrant SOM, the net decomposition is not hindered by these chemical

  15. Adsorption of sulfonamides on reduced graphene oxides as affected by pH and dissolved organic matter.

    PubMed

    Liu, Fei-Fei; Zhao, Jian; Wang, Shuguang; Xing, Baoshan

    2016-03-01

    With the significant increase in use and application of graphene and the frequent presence of sulfonamides (SAs) in water environments, their interactions have attracted extensive attention. In this study, adsorption of two selected SAs (sulfapyridine and sulfathiazole) by two reduced graphene oxides (rGO1 and rGO2) was examined as affected by pH and dissolved organic matter (DOM). Adsorption of SAs by rGOs was highly pH-dependent, and adsorption affinity of different SAs species followed the order of SA(0) > SA(+) > SA(-). The contribution of SA(0) to the overall adsorption was greater than its species fraction, implying the importance of the neutral species to adsorption. SAs adsorption isotherms at three selected pHs were in the order of pH 5.0 > pH 1.0 > pH 11.0, which was in accordance with the variation of site energy distribution analysis. Hydrophobic interaction, π-π EDA interaction and electrostatic interaction were the main mechanisms responsible for SAs adsorption by rGOs. Three representative natural DOMs including humic acid (HA), bovine serum albumin (BSA), and sodium alginate together with sodium dodecylbenzenesulfonate (SDBS) as a synthetic DOM were used to investigate their effect on SAs adsorption. The inhibition impact of DOM on SAs adsorption was lower for rGOs compared with carbon nanotubes and graphite, which might be attributed to the higher oxygen contents of rGOs. Also, the suppression effect of DOM generally followed an order of SDBS > HA ≥ BSA > alginate, indicating the importance role of DOM compositions. These results should be important for assessing the fate and transport of graphene and antibiotics in the environment.

  16. The repeated drying-wetting and freezing-thawing cycles affect only the active pool of soil organic matter

    NASA Astrophysics Data System (ADS)

    Semenov, Vyacheslav; Zinyakova, Natalya; Tulina, Anastasiya

    2016-04-01

    The decrease in the content of soil organic carbon, particularly in active form, is one of the major problems of the 21st century, which is closely related to the disturbance of the biogeochemical carbon cycle and to the increase in the emission of carbon dioxide into the atmosphere. The main reasons for the SOM losses are the surplus of the SOM active pool losses due to mineralization, erosion, and infiltration over the input of fresh organic matter to the soil, as well as the changes in the soil conditions and processes due to natural and anthropogenic disturbing impacts. Experiments were carried out with mixed samples from the upper layers of soddy-podzolic soil, gray forest soil, and typical chernozems. Soil samples as controls were incubated after wetting for 150 days. The dynamics and cumulative production of C-CO2 under stable temperature (22°C) and moisture conditions were determined; the initial content of potentially mineralizable organic matter (C0) in the soil at the beginning of the incubation was then calculated to use these data as the control. Other soil samples were exposed in flasks to the following successive treatments: wetting →incubation → freezing → thawing → incubation →drying. Six repeated cycles of disturbing impacts were performed for 140 days of the experiment. After six cycles, the soil samples were incubated under stable temperature and moisture conditions for 150 days. The wetting of dried soils and the thawing of frozen soils are accompanied by the pulsed dynamics of the C-CO2 production with an abrupt increase in the rate of the C-CO2 emission within several days by 2.7-12.4 and 1.6-2.7 times, respectively, compared to the stable incubation conditions. The rate of the C-CO2 production pulses under each subsequent impact decreased compared to the preceding one similarly for all studied soils, which could be due to the depletion in potentially mineralizable soil organic matter (C0). The cumulative extra C-CO2 production by

  17. Reverse osmosis sampling does not affect the protective effect of dissolved organic matter on copper and zinc toxicity to freshwater organisms.

    PubMed

    De Schamphelaere, K A C; Unamuno, V I R; Tack, F M G; Vanderdeelen, J; Janssen, C R

    2005-02-01

    Dissolved organic matter (DOM) plays a significant role in protecting freshwater organisms against metal toxicity. To study this, reverse osmosis (RO) has been widely used as a highly efficient method for rapid collection of large quantities of DOM from natural surface waters. The objective of this study was to examine the potential impact of the RO isolation technique on the protective effects of DOM on the toxicity of copper and zinc to the cladoceran Daphnia magna and the green alga Pseudokirchneriella subcapitata. DOM was concentrated from a natural surface water using RO and at the same time a natural (unconcentrated) surface water was taken. The concentrated DOM was rediluted to the level of the natural water to obtain the so-called reconstituted water. Chemical analyses and toxicity tests were performed with both the natural surface water and the reconstituted water. First, most chemical parameters were not significantly changed by the RO sampling. For both copper and zinc, no significant differences were observed in 48 h-EC50s for D. magna and in 72 h-EC50s for P. subcapitata between the reconstituted water and the natural water. Hence, it may be concluded that reverse osmosis does not significantly affect the protective effect of natural DOM against copper and zinc toxicity.

  18. Soil Organic Matter Quality of an Oxisol Affected by Plant Residues and Crop Sequence under No-Tillage

    NASA Astrophysics Data System (ADS)

    Cora, Jose; Marcelo, Adolfo

    2013-04-01

    Plant residues are considered the primarily resource for soil organic matter (SOM) formation and the amounts and properties of plant litter are important controlling factors for the SOM quality. We determined the amounts, quality and decomposition rate of plant residues and the effects of summer and winter crop sequences on soil organic C (TOC) content, both particulate organic C (POC) and mineral-associated organic C (MOC) pools and humic substances in a Brazilian Rhodic Eutrudox soil under a no-tillage system. The organic C analysis in specifics pools used in this study was effective and should be adopted in tropical climates to evaluate the soil quality and the sustainability of various cropping systems. Continuous growth of soybean (Glycine max L. Merrill) on summer provided higher contents of soil POC and continuous growth of maize (Zea mays L.) provided higher soil humic acid and MOC contents. Summer soybean-maize rotation provided the higher plant diversity, which likely improved the soil microbial activity and the soil organic C consumption. The winter sunn hemp (Crotalaria juncea L.), pigeon pea (Cajanus cajan (L.) Millsp), oilseed radish (Raphanus sativus L.) and pearl millet (Pennisetum americanum (L.) Leeke) enhanced the soil MOC, a finding that is attributable to the higher N content of the crop residue. Sunn hemp and pigeon pea provided the higher soil POC content. Sunn hemp showed better performance and positive effects on the SOM quality, making it a suitable winter crop choice for tropical conditions with a warm and dry winter.

  19. Suspended particulate matter fluxes along with their associated metals, organic matter and carbonates in a coastal Mediterranean area affected by mining activities.

    PubMed

    Helali, Mohamed Amine; Zaaboub, Noureddine; Oueslati, Walid; Added, Ayed; Aleya, Lotfi

    2016-03-15

    A study of suspended particulate matter (SPM) fluxes along with their associated metals, organic matter and carbonates, was conducted off the Mejerda River outlet in May 2011 and in March and July 2012 at depths of 10, 20 and 40 m using sediment traps. SPM fluxes are more significant near the Mejerda outlet, especially in winter, but dissipate further offshore. Normalization reveals that the Mejerda is a major source of Pb, Zn, Cd, Cu, Ni, and Co, all of which are the result of human activities. In contrast, Fe, Mn and N are of authigenic origin. The enrichment factor shows that Pb, Zn and especially Cd are the most highly polluting metals off the Mejerda outlet. This confirms the trend observed on the shores of the Mejerda prodelta and is consistent with the type of mining activities conducted in the Mejerda catchment.

  20. Dissolved organic matter dynamics in surface waters affected by oil spill pollution: Results from the Serious Game exercise

    NASA Astrophysics Data System (ADS)

    Gonnelli, M.; Galletti, Y.; Marchetti, E.; Mercadante, L.; Retelletti Brogi, S.; Ribotti, A.; Sorgente, R.; Vestri, S.; Santinelli, C.

    2016-11-01

    Dissolved organic carbon (DOC), chromophoric and fluorescent dissolved organic matter (CDOM and FDOM, respectively) surface distribution was studied during the Serious Game exercise carried out in the Eastern Ligurian Sea, where an oil spill was localized by using satellite images and models. This paper reports the first DOC, CDOM and FDOM data for this area together with an evaluation of fluorescence as a fast and inexpensive tool for early oil spill detection in marine waters. The samples collected in the oil spill showed a fluorescence intensity markedly higher ( 5 fold) than all the other samples. The excitation-emission matrixes, coupled with parallel factor analysis (PARAFAC), allowed for the identification in the FDOM pool of a mixture of polycyclic aromatic hydrocarbons, humic-like and protein-like fluorophores.

  1. How does organic matter affect the head velocity and run-out distance of cohesive sediment gravity flows?

    NASA Astrophysics Data System (ADS)

    Craig, Melissa; Baas, Jaco; Amos, Kathryn; Strachan, Lorna; Baker, Megan

    2016-04-01

    Despite over 50 years of multidisciplinary research on the flow mechanics and deposits of submarine saline density currents and sediment gravity flows, the flow dynamics and depositional processes of clay-rich gravity flows remain poorly understood. Cohesive clay can alter the flow rheology as a result of the electrochemical forces of attraction between individual particles. These forces may induce particle aggregation, leading to the formation of floccules and more pervasive cohesive structures, called gels. Through flocculation and gelling, clay particles can enhance or dampen turbulent forces in sediment gravity flows, such that increasing the cohesive sediment content causes a transition from turbulent, Newtonian flow, via transient-turbulent flow, to laminar, non-Newtonian debris flow. Because the flow rheology controls the depositional style, a thorough understanding of how flow composition relates to flow rheology is essential for our interpretation of the architecture and the palaeo-environmental setting of submarine deposits in outcrop and core. In the natural environment, clay-rich sediments are commonly associated with the presence of organic matter. The effect of organic matter, in particular 'sticky' extracellular polymeric substances (EPS), on the flocculation and gelling within clay-laden flows is reasonably well known for tidal flows in shallow-marine environments, but the impact of cohesive organic matter on the dynamics of sediment gravity flows has not been explored yet. A complex interaction between physical and biological forces has been found to influence the stability of sedimentary deposits. Here, the influence of similar interactions for clay and EPS suspended within sediment gravity flows is presented. The above research gaps were addressed by means of flume experiments that recorded changes in dynamic behaviour of sediment gravity flows with variable amounts of biologically cohesive xanthan gum (a commonly used proxy for natural EPS) and

  2. Soil compaction and organic matter affect conifer seedling nonmycorrhizal and ectomycorrhizal root tip abundance and diversity. Forest Service research paper

    SciTech Connect

    Amaranthus, M.P.; Page-Dumroese, D.; Harvey, A.; Cazares, E.; Bednar, L.F.

    1996-05-01

    Three levels of organic matter removal (bole only; bole and crowns; and bole, crowns, and forest floor) and three levels of mechanical soil compaction (no compaction, moderate compaction, and severe soil compaction) were studied as they influence Douglas-fir (Pseudotsuga menziesii var. glauca (Beissn.) Franco) and western white pine (Pinus monticola Dougl. ex D. Don) seedlings following outplanting. Moderate and severe soil compaction significantly reduced nonmycorrhizal root tip abundance on both Douglas-fir and western white pine seedlings (p less than or equal to 0.05). Ectomycorrhizal root tip abundance was significantly reduced on Douglas-fir seedlings in severely compacted areas with bole and crowns and bole, crowns, and forest floor removed. Ectomycorrhizal diversity also was significantly reduced on Douglas-fir seedlings in all severely compacted areas.

  3. Toxicity and internalization of CuO nanoparticles to prokaryotic alga Microcystis aeruginosa as affected by dissolved organic matter.

    PubMed

    Wang, Zhenyu; Li, Jing; Zhao, Jian; Xing, Baoshan

    2011-07-15

    This is the first study investigating the toxicity of nanoparticles (NPs) to algae in the presence of dissolved organic matter (DOM). Suwannee river fulvic acid (SRFA), a type of DOM, could significantly increase the toxicity of CuO NPs to prokaryotic alga Microcystis aeruginosa. Internalization of CuO NPs was observed for the first time in the intact algal cells using high resolution transmission electron microscopy (HRTEM), and the cell uptake was enhanced by SRFA. A fast Fourier transformation (FFT)/inversed FFT (IFFT) process revealed that a main form of intracellular NPs was Cu(2)O, and an intracellular environment may reduce CuO into Cu(2)O. The internalization behavior alone did not seem to pose a hazard to membrane integrity as shown from the flow cytometry data. Elevated CuO nanotoxicity by SRFA was related to a combination of a lesser degree of aggregation, higher Cu(2+) release, and enhanced internalization of CuO NPs.

  4. Fluorescence EEM and FT-IR analyses for examination of soil organic matter compositions affected by incubation conditions

    NASA Astrophysics Data System (ADS)

    Kim, Eun-Ah; Vo-Minh Nguyen, Hang; Choi, Jung Hyun

    2015-04-01

    This study investigated the effects of soil drying-rewetting, nitrogen deposition, and temperature rise on the changes in dissolved soil organic matter quantities and their compositions.A PARAFAC method was employed to analyze the changes in the sub-fractions of fluorescent DOM components, which revealed that the dry forest soil accumulated relatively more amino acid type DOM than humic-like substances whereas the other soil groups showed the opposite trend.Nitrogen deposition, and temperature rise did not induce significant changes in the fluorescent DOM components. FT-IR analysis results were compared with the fluorescence EEM results, which provided complementary information about the characteristic functional groups of DOM. A principal component analysis (PCA) with the PARAFAC component scores, and the intensity ratios of representative FT-IR peaks gave a comprehensive interpretation on the changes of DOM compositions in response to the variations in the incubation conditions.

  5. Invasion of moso bamboo into a Japanese cedar plantation affects the chemical composition and humification of soil organic matter

    PubMed Central

    Wang, Hsueh-Ching; Tian, Guanglong; Chiu, Chih-Yu

    2016-01-01

    Bamboo, which has dense culms and root rhizome systems, can alter soil properties when it invades adjacent forests. Therefore, this study investigated whether bamboo invasions can cause changes in soil organic matter (SOM) composition and soil humification. We combined solid-state 13C NMR spectroscopy and chemical analysis to examine the SOM in a Japanese cedar (Cryptomeria japonica) and adjacent bamboo (Phyllostachys edulis) plantation. Bamboo reduced soil organic C (SOC) content, compared to the cedar plantation. The value of ∆logK (ratio of absorbance of humic acids at 400 and 600 nm) was cedar > transition zone > bamboo soils. Our results indicated that bamboo increased SOM humification, which could be due to the fast decomposition of bamboo litter with the high labile C. Furthermore, intensive management in the bamboo plantation could enhance the humification as well. Overall, litter type can control an ecosystem’s SOC nature, as reflected by the finding that higher labile C in bamboo litter contributed the higher ratios of labile C to SOC and lower ratios of recalcitrant C to SOC in bamboo soils compared with cedar soils. The invasion of bamboo into the Japanese cedar plantation accelerated the degradation of SOM. PMID:27558833

  6. Suspension stability and aggregation of multi-walled carbon nanotubes as affected by dissolved organic matters extracted from agricultural wastes.

    PubMed

    Li, Helian; Qiu, Yanhua; Wang, Xiaonuan; Liu, Wenhao; Chen, Guangcai; Ma, Yibing; Xing, Baoshan

    2016-03-01

    Dissolved organic matters (DOMs) extracted from wheat straw (SDOM) and cow manure (MDOM) were used to investigate their effects on the suspension stability and aggregation of multi-walled carbon nanotubes (MWCNTs). Two types of DOM can effectively disperse and stabilize the MWCNTs. At initial MWCNT concentration of 500 mg/L, suspended MWCNT concentration ranged from 8.0 to 17.9 mg/L as DOM were varied from 50 to 200 mg/L dissolved organic carbon (DOC). The critical coagulation concentration (CCC) values were estimated to be 41.4 mM NaCl and 5.3 mM CaCl2 in the absence of DOM. The presence of SDOM and MDOM significantly retarded the aggregation rate of MWCNTs. The CCC values increased to 120 mM NaCl and 14.8 mM CaCl2 at SDOM concentration of 20 mg/L DOC. Due to its higher aromaticity and molecular weight, MDOM showed higher ability to stabilize MWCNTs, with CCC values of 201 mM and 15.8 mM at 20 mg/L DOC. These findings revealed that DOMs originated from agricultural wastes will have great impact on the dispersion and stabilization of MWCNTs, thus their fate in the aquatic environment.

  7. Invasion of moso bamboo into a Japanese cedar plantation affects the chemical composition and humification of soil organic matter.

    PubMed

    Wang, Hsueh-Ching; Tian, Guanglong; Chiu, Chih-Yu

    2016-08-25

    Bamboo, which has dense culms and root rhizome systems, can alter soil properties when it invades adjacent forests. Therefore, this study investigated whether bamboo invasions can cause changes in soil organic matter (SOM) composition and soil humification. We combined solid-state (13)C NMR spectroscopy and chemical analysis to examine the SOM in a Japanese cedar (Cryptomeria japonica) and adjacent bamboo (Phyllostachys edulis) plantation. Bamboo reduced soil organic C (SOC) content, compared to the cedar plantation. The value of ∆logK (ratio of absorbance of humic acids at 400 and 600 nm) was cedar > transition zone > bamboo soils. Our results indicated that bamboo increased SOM humification, which could be due to the fast decomposition of bamboo litter with the high labile C. Furthermore, intensive management in the bamboo plantation could enhance the humification as well. Overall, litter type can control an ecosystem's SOC nature, as reflected by the finding that higher labile C in bamboo litter contributed the higher ratios of labile C to SOC and lower ratios of recalcitrant C to SOC in bamboo soils compared with cedar soils. The invasion of bamboo into the Japanese cedar plantation accelerated the degradation of SOM.

  8. Invasion of moso bamboo into a Japanese cedar plantation affects the chemical composition and humification of soil organic matter

    NASA Astrophysics Data System (ADS)

    Wang, Hsueh-Ching; Tian, Guanglong; Chiu, Chih-Yu

    2016-08-01

    Bamboo, which has dense culms and root rhizome systems, can alter soil properties when it invades adjacent forests. Therefore, this study investigated whether bamboo invasions can cause changes in soil organic matter (SOM) composition and soil humification. We combined solid-state 13C NMR spectroscopy and chemical analysis to examine the SOM in a Japanese cedar (Cryptomeria japonica) and adjacent bamboo (Phyllostachys edulis) plantation. Bamboo reduced soil organic C (SOC) content, compared to the cedar plantation. The value of ∆logK (ratio of absorbance of humic acids at 400 and 600 nm) was cedar > transition zone > bamboo soils. Our results indicated that bamboo increased SOM humification, which could be due to the fast decomposition of bamboo litter with the high labile C. Furthermore, intensive management in the bamboo plantation could enhance the humification as well. Overall, litter type can control an ecosystem’s SOC nature, as reflected by the finding that higher labile C in bamboo litter contributed the higher ratios of labile C to SOC and lower ratios of recalcitrant C to SOC in bamboo soils compared with cedar soils. The invasion of bamboo into the Japanese cedar plantation accelerated the degradation of SOM.

  9. CO2 leakage from carbon dioxide capture and storage (CCS) systems affects organic matter cycling in surface marine sediments.

    PubMed

    Rastelli, Eugenio; Corinaldesi, Cinzia; Dell'Anno, Antonio; Amaro, Teresa; Greco, Silvestro; Lo Martire, Marco; Carugati, Laura; Queirós, Ana M; Widdicombe, Stephen; Danovaro, Roberto

    2016-12-01

    Carbon dioxide capture and storage (CCS), involving the injection of CO2 into the sub-seabed, is being promoted worldwide as a feasible option for reducing the anthropogenic CO2 emissions into the atmosphere. However, the effects on the marine ecosystems of potential CO2 leakages originating from these storage sites have only recently received scientific attention, and little information is available on the possible impacts of the resulting CO2-enriched seawater plumes on the surrounding benthic ecosystem. In the present study, we conducted a 20-weeks mesocosm experiment exposing coastal sediments to CO2-enriched seawater (at 5000 or 20,000 ppm), to test the effects on the microbial enzymatic activities responsible for the decomposition and turnover of the sedimentary organic matter in surface sediments down to 15 cm depth. Our results indicate that the exposure to high-CO2 concentrations reduced significantly the enzymatic activities in the top 5 cm of sediments, but had no effects on subsurface sediment horizons (from 5 to 15 cm depth). In the surface sediments, both 5000 and 20,000 ppm CO2 treatments determined a progressive decrease over time in the protein degradation (up to 80%). Conversely, the degradation rates of carbohydrates and organic phosphorous remained unaltered in the first 2 weeks, but decreased significantly (up to 50%) in the longer term when exposed at 20,000 ppm of CO2. Such effects were associated with a significant change in the composition of the biopolymeric carbon (due to the accumulation of proteins over time in sediments exposed to high-pCO2 treatments), and a significant decrease (∼20-50% at 5000 and 20,000 ppm respectively) in nitrogen regeneration. We conclude that in areas immediately surrounding an active and long-lasting leak of CO2 from CCS reservoirs, organic matter cycling would be significantly impacted in the surface sediment layers. The evidence of negligible impacts on the deeper sediments should be considered with

  10. Arctic River organic matter transport

    NASA Astrophysics Data System (ADS)

    Raymond, Peter; Gustafsson, Orjan; Vonk, Jorien; Spencer, Robert; McClelland, Jim

    2016-04-01

    Arctic Rivers have unique hydrology and biogeochemistry. They also have a large impact on the Arctic Ocean due to the large amount of riverine inflow and small ocean volume. With respect to organic matter, their influence is magnified by the large stores of soil carbon and distinct soil hydrology. Here we present a recap of what is known of Arctic River organic matter transport. We will present a summary of what is known of the ages and sources of Arctic River dissolved and particulate organic matter. We will also discuss the current status of what is known about changes in riverine organic matter export due to global change.

  11. Organic matter quantity and source affects microbial community structure and function following volcanic eruption on Kasatochi Island, Alaska

    USGS Publications Warehouse

    Zeglin, Lydia H.; Wang, Bronwen; Waythomas, Christopher F.; Rainey, Frederick; Talbot, Sandra

    2016-01-01

    In August 2008, Kasatochi volcano erupted and buried a small island in pyroclastic deposits and fine ash; since then, microbes, plants and birds have begun to re-colonize the initially sterile surface. Five years post-eruption, bacterial 16S rRNA gene and fungal internal transcribed spacer (ITS) copy numbers and extracellular enzyme activity (EEA) potentials were one to two orders of magnitude greater in pyroclastic materials with organic matter (OM) inputs relative to those without, despite minimal accumulation of OM (< 0.2%C). When normalized by OM levels, post-eruptive surfaces with OM inputs had the highest β-glucosidase, phosphatase, NAGase and cellobiohydrolase activities, and had microbial population sizes approaching those in reference soils. In contrast, the strongest factor determining bacterial community composition was the dominance of plants versus birds as OM input vectors. Although soil pH ranged from 3.9 to 7.0, and %C ranged 100×, differentiation between plant- and bird-associated microbial communities suggested that cell dispersal or nutrient availability are more likely drivers of assembly than pH or OM content. This study exemplifies the complex relationship between microbial cell dispersal, soil geochemistry, and microbial structure and function; and illustrates the potential for soil microbiota to be resilient to disturbance.

  12. Tree species affect cation exchange capacity (CEC) and cation binding properties of organic matter in acid forest soils.

    PubMed

    Gruba, Piotr; Mulder, Jan

    2015-04-01

    Soil organic matter (SOM) in forest soil is of major importance for cation binding and acid buffering, but its characteristics may differ among soils under different tree species. We investigated acidity, cation exchange properties and Al bonding to SOM in stands of Scots pine, pedunculate oak, Norway spruce, European beech and common hornbeam in southern Poland. The content of total carbon (Ct) was by far the major contributor to total cation exchange capacity (CECt) even in loamy soils and a strong relationship between Ct and CECt was found. The slope of the regression of CECt to Ct increased in the order hornbeam≈oak

  13. The important characteristics of soil organic matter affecting 2,4-dichlorophenoxyacetic acid sorption along a catenary sequence.

    PubMed

    Farenhorst, Annemieke; Saiyed, Ibrahim M; Goh, Tee Boon; McQueen, Peter

    2010-04-01

    Variations in the characteristics of soil organic matter (SOM) at the field-scale are largely unknown, particularly in relation to observed variations in herbicide sorption. For the herbicide 2,4-D [2,4-dichlorophenoxyacetic acid], we found that its organic carbon-normalized sorption coefficient, Koc, varied by four-fold, from 76 to 315 L kg(-1), in the Ap-horizon along a slope transect in an undulating agricultural field in Manitoba, Canada. In order to explain the relatively large in-field variation in 2,4-D Koc values, techniques ranging from conventional chemical fractionation methods to solid state Cross Polarization and Magic-Angle Spinning (13)C-Nuclear Magnetic Resonance applied on whole soils, were used to derive SOM chemical, physical and structural parameters for correlation analyses with the measured 2,4-D Koc values on whole soils. Out of the 15 parameters considered, the 2,4-D Koc was significantly positively correlated with 1) the carbon (C) content of sodium hydroxide-extracted humic acids (r = 0.83, P < 0.01), a chemical parameter indicative of free form C in soil; 2) the molar absorptivity of humic acids at wavelength 280 nm (r = 0.81, P < 0.01), a physical parameter indicative of greater SOM aromaticity; and 3) the relatively intensity of aryl C (r = 0.92, P < 0.01) and O-aryl C (r = 0.93, P < 0.01) in whole soil, both structural parameters indicative of aromatic C. Consequently, the results suggest that in-field variations in 2,4-D Koc values are induced by variations in SOM aromaticity. Koc values are among the most sensitive parameters in herbicide fate models used in regulatory and environmental assessments. Currently, these herbicide fate models do not consider associations between SOM characteristics and Koc and hence revising model equations to include these associations may improve estimates of herbicide persistence, bioavailability and transport at the field-scale.

  14. Persistence, distribution, and emission of Telone C35 injected into a Florida sandy soil as affected by moisture, organic matter, and plastic film cover.

    PubMed

    Thomas, J E; Ou, L T; Allen, L H; McCormack, L A; Vu, J C; Dickson, D W

    2004-05-01

    With the phase-out of methyl bromide scheduled for 2005, alternative fumigants are being sought. This study of Telone C35, a mixture of (Z)- and (E)-1,3-dichloropropene (1,3-D) with chloropicirin (CP), focuses on its emissions, distribution, and persistence in Florida sandy soil in microplots with different soil-water and organic matter carbon (C) content with and without two different plastic film mulches. The addition of CP did not affect the physical behavior of the isomers of 1,3-D. Slower subsurface dispersion and longer residence time of the mixed fumigant occurred at higher water content. An increase in the percent organic carbon in the soil led to a more rapid decrease for chloropicirin than for 1,3-dichloropene isomers. The use of a virtually impermeable film (VIF) for soil cover provided a more even distribution and longer persistence under all the conditions studied in comparison to polyethylene (PE) film cover or no cover. The conditions of near field capacity water content, low organic matter, and a virtually impermeable film cover yielded optimum conditions for the distribution, emission control, and persistence of Telone C35 in a Florida sandy soil.

  15. Estrone degradation: does organic matter (quality), matter?

    PubMed

    Tan, David T; Temme, Hanna R; Arnold, William A; Novak, Paige J

    2015-01-06

    Understanding the parameters that drive E1 degradation is necessary to improve existing wastewater treatment systems and evaluate potential treatment options. Organic matter quality could be an important parameter. Microbial communities grown from activated sludge seeds using different dissolved organic matter sources were tested for E1 degradation rates. Synthetic wastewater was aged, filter-sterilized, and used as a carbon and energy source to determine if recalcitrant organic carbon enhances E1 degradation. Higher E1 degradation was observed by biomass grown on 8 d old synthetic wastewater compared to biomass grown on fresh synthetic wastewater (P = 0.033) despite much lower concentrations of bacteria. Minimal or no E1 degradation was observed in biomass grown on 2 d old synthetic wastewater. Organic carbon analyses suggest that products of cell lysis or microbial products released under starvation stress stimulate E1 degradation. Additional water sources were also tested: lake water, river water, and effluents from a municipal wastewater treatement plant and a treatment wetland. E1 degradation was only observed in biomass grown in treatment effluent. Nitrogen, dissolved organic carbon, and trace element concentrations were not causative factors for E1 degradation. In both experiments, spectrophotometric analyses reveal degradation of E1 is associated with microbially derived organic carbon but not general recalcitrance.

  16. Organic matter in meteorites.

    PubMed

    Llorca, Jordi

    2004-12-01

    Some primitive meteorites are carbon-rich objects containing a variety of organic molecules that constitute a valuable record of organic chemical evolution in the universe prior to the appearance of microorganisms. Families of compounds include hydrocarbons, alcohols, aldehydes, ketones, carboxylic acids, amino acids, amines, amides, heterocycles, phosphonic acids, sulfonic acids, sugar-related compounds and poorly defined high-molecular weight macromolecules. A variety of environments are required in order to explain this organic inventory, including interstellar processes, gas-grain reactions operating in the solar nebula, and hydrothermal alteration of parent bodies. Most likely, substantial amounts of such organic materials were delivered to the Earth via a late accretion, thereby providing organic compounds important for the emergence of life itself, or that served as a feedstock for further chemical evolution. This review discusses the organic content of primitive meteorites and their relevance to the build up of biomolecules.

  17. Organic matter characteristics of food processing industry wastewaters affecting their C and N mineralization in soil incubation.

    PubMed

    Parnaudeau, Virginie; Nicolardot, Bernard; Robert, Philippe; Alavoine, Gonzague; Pagès, Jérôme; Duchiron, Francis

    2006-07-01

    This study aimed at determining food processing wastewater composition factors that regulate their carbon and nitrogen mineralization when added to soil. Twenty three different wastewaters from various food processing industries were characterized by C and N concentrations, liquid and solid physical separation and acid solubility. They were also incubated in a calcareous soil during six months at 28 degrees C. The C and N concentrations were low but covered a wide range. Carbon and nitrogen were variously distributed in the liquid and solid fractions and much C was present in the acid-soluble fraction in which C to N ratios were low. The C and N mineralization measured during soil incubation covered a wide range of decomposition pathways. Carbon mineralization was linked significantly (p=0.05) with the C to N ratio of the acid soluble fraction and C present in the liquid fraction. N mineralization was significantly correlated (p=0.05) with the organic C to organic N ratio and the C to N ratio of the acid soluble fraction. Multiple factor analysis and clustering also enabled defining clusters which partially overlap the various origins of the wastewaters.

  18. New analytical technique for establishing the quality of Soil Organic Matter affected by a wildfire. A first approach using Fourier transform ion cyclotron resonance mass spectrometry

    NASA Astrophysics Data System (ADS)

    Jiménez-Morillo, Nicasio T.; González-Pérez, José A.; Waggoner, Derek C.; Almendros, Gonzalo; González-Vila, Francisco J.; Hatcher, Patrick G.

    2016-04-01

    Introduction: Fire is one of the most important modulator factors of the environment and the forest. It is able to induce chemical and biological shifts and these, in turn, can alter the physical properties of soil. Generally, fire affects the most reactive fraction, soil organic matter (SOM) (González-Pérez et al., 2004) resulting in changes to several soil properties and functions. To study changes in SOM following a wildfire, researchers can count on several traditional as well as new analytical techniques. One of the most recently employed techniques is Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR-MS). This new powerful ultra-high resolution mass spectral technique, together with graphic interpretation tools such as van Krevelen diagrams (Kim et al, 2003), may be used to shed light on alterations caused by the burning of SOM. The objective of this research is to study fire impacts on SOM, using a sandy soil collected under a Cork oak (Quercus suber) in Doñana National Park, Southwest Spain. that was affected by a wildfire in August 2012. Methods: The impact of fire on SOM was studied in various different sieve fractions (coarse, 1-2 mm, and fine, <0.05 mm) collected in a burned area and an adjacent unburned control site with the same physiographic conditions. Alkaline extracts of SOM from each soil sample were examined using a Bruker Daltonics 12 Tesla Apex Qe FT-ICR-MS equipped with an Apollo II ESI ion source (operating in negative ion mode). The ESI voltages were optimized for each sample, and all spectra were internally calibrated following the procedure of (Sleighter and Hatcher, 2007), after which, peaks were assigned unique molecular formulas using a MatLab script written in house by Dr. Wassim Obeid of Old Dominion University. Results: The van Krevelen diagrams together with the relative intensity of each chemical compound, both obtained by FT-ICR-MS, allowed us to assess SOM quality for each sample and size fractions. The

  19. δ 13C and δ 15N Values of Soil Organic Matter Over Drought and Non-drought Affected Elevation Gradients in Ethiopia: Calibrating for Environmental Reconstruction

    NASA Astrophysics Data System (ADS)

    Terwilliger, V. J.; Eshetu, Z.; Colman, A. S.; Fogel, M.

    2004-12-01

    Portions of Ethiopia today are experiencing increasing temperatures and drought frequencies. The longest known hominid record is in Ethiopia's Awash Basin. Reconstructing past environments in Ethiopia may, therefore, contribute both to understanding present day and past consequences of climate change. Studies suggest that at least 7000 years of environmental reconstruction may be possible from isotopic analyses of organic matter in some Ethiopian paleosols. We have measured δ 13C and δ 15N of organic matter from modern soils in Ethiopia to explore the climatic dependence of these signals and thus to determine the maximum resolution of climatic reconstruction possible by bulk isotopic analyses of soil organic matter (SOM). Surface soil samples were taken at elevations from 350 - 3500 m in drought affected regions and from 1050 - 3100 m in regions with no history of drought. Collections were made at an altitude resolution of better than 150 m. Deeper soil samples (max. 27 m) were also obtained at 22 elevations in sites of the Awash Basin that had already been studied using other paleoenvironmental proxies. Soils were sampled in grassland, shrubland, forest, and grass/sedge wetland. The δ 15N values of SOM decreased significantly with increase in elevation and were sensitive to both overlaying vegetation type and drought proclivity. Our results support hypotheses that δ 15N values vary with total nitrogen pools in soils which, in turn vary with humidity and associated microbial influences. The δ 13C values of SOM had a quadratic relationship to elevation that most likely reflected the relative compositions of C3 and C4 biomass in overlying vegetation. Exposure to drought could not be detected by δ 13C values. At sites in the Hadar region where depth profile measurements were made to 27 m, δ 13C values decreased with depth. This result conforms to inferences from other proxy that a cooler, wetter climate previously existed. Nitrogen contents of soils below 3 m

  20. Snow vole (Chionomys nivalis Martins) affects the redistribution of soil organic matter and hormone-like activity in the alpine ecosystem: ecological implications.

    PubMed

    Pizzeghello, Diego; Cocco, Stefania; Francioso, Ornella; Ferrari, Erika; Cardinali, Alessandra; Nardi, Serenella; Agnelli, Alberto; Corti, Giuseppe

    2015-10-01

    In alpine environments, colonies of snow vole (Chionomys nivalis Martins) cause strong pedoturbation, which may affect humification process and soil organic matter (SOM) cycling, with repercussions on the hormone-like activity of organics. We investigated the effect of snow vole pedoturbation on the chemical and spectroscopic features of soil organic fractions, and the potential hormone-like activity of humic and fulvic acids (HA, FA). The study site was located on the high-mountain environment of the Majella massif (central Italy). Pedoturbated and regular soils were morphologically described and characterized for pH and content of total organic carbon, total extractable carbon, HA, and FA. Both HA and FA were extracted and investigated using attenuated total reflectance/Fourier transform infrared (ATR/FTIR), nuclear magnetic resonance with high-resolution magic angle spinning (HRMAS-NMR), and (1)H-(13)C heteronuclear single quantum coherence (HSQC). HA and FA were also tested for their auxin-like and gibberellin-like activities. Results provide evidences that bioturbated and regular soils contain a poorly decomposed SOM, but HA and FA with a well-defined molecular structure. The HA and FA from both bioturbated and regular soils show a hormone-like activity with a different allocation along the soil profile. In the regular soil, the highest auxin-like activity was shown by HA and FA from Oe1 horizon, while gibberellin-like activity was expressed by FA from Oe2 horizon. Burrowing activity determines a redistribution of organics throughout the profile with a relatively high auxin-like activity in the FA from straw tunnel wall (STW) and gibberellin-like activity in the HA from vole feces (VF). The relative high presence of carboxylic acids, amides, proteins, and amino acids in the FA from STW and the aromatic moieties in the HA from VF put evidences for their different behavior. The fact that snow vole activity has modified the chemical and biological properties of

  1. The nature of soil organic matter affects sorption of pesticides. 1. Relationships with carbon chemistry as determined by 13C CPMAS NMR spectroscopy.

    PubMed

    Ahmad, R; Kookana, R S; Alston, A M; Skjemstad, J O

    2001-03-01

    The structural composition of soil organic matter (SOM) was determined in twenty-seven soils with different vegetation from several ecological zones of Australia and Pakistan using solid-state CPMAS 13C NMR. The SOM was characterized using carbon types derived from the NMR spectra. Relationships were determined between Koc (sorption per unit organic C) of carbaryl(1-naphthylmethylcarbamate) and phosalone (S-6-chloro-2,3-dihydro-2-oxobenzoxazol-3-ylmethyl O,O-diethyl phosphorodithioate) and the nature of organic matter in the soils. Substantial variations were revealed in the structural composition of organic matter in the soils studied. The variations in Koc values of the pesticides observed for the soils could be explained only when variations in the aromatic components of SOM were taken into consideration. The highly significant positive correlations of aromaticity of SOM and Koc values of carbaryl and phosalone revealed that the aromatic component of SOM is a good predictor of a soil's ability to bind such nonionic pesticides.

  2. Extraterrestrial organic matter: a review

    NASA Technical Reports Server (NTRS)

    Irvine, W. M.

    1998-01-01

    We review the nature of the widespread organic material present in the Milky Way Galaxy and in the Solar System. Attention is given to the links between these environments and between primitive Solar System objects and the early Earth, indicating the preservation of organic material as an interstellar cloud collapsed to form the Solar System and as the Earth accreted such material from asteroids, comets and interplanetary dust particles. In the interstellar medium of the Milky Way Galaxy more than 100 molecular species, the bulk of them organic, have been securely identified, primarily through spectroscopy at the highest radio frequencies. There is considerable evidence for significantly heavier organic molecules, particularly polycyclic aromatics, although precise identification of individual species has not yet been obtained. The so-called diffuse interstellar bands are probably important in this context. The low temperature kinetics in interstellar clouds leads to very large isotopic fractionation, particularly for hydrogen, and this signature is present in organic components preserved in carbonaceous chondritic meteorites. Outer belt asteroids are the probable parent bodies of the carbonaceous chondrites, which may contain as much as 5% organic material, including a rich variety of amino acids, purines, pyrimidines, and other species of potential prebiotic interest. Richer in volatiles and hence less thermally processed are the comets, whose organic matter is abundant and poorly characterized. Cometary volatiles, observed after sublimation into the coma, include many species also present in the interstellar medium. There is evidence that most of the Earth's volatiles may have been supplied by a 'late' bombardment of comets and carbonaceous meteorites, scattered into the inner Solar System following the formation of the giant planets. How much in the way of intact organic molecules of potential prebiotic interest survived delivery to the Earth has become an

  3. Extraterrestrial organic matter: a review

    NASA Technical Reports Server (NTRS)

    Irvine, W. M.

    1998-01-01

    We review the nature of the widespread organic material present in the Milky Way Galaxy and in the Solar System. Attention is given to the links between these environments and between primitive Solar System objects and the early Earth, indicating the preservation of organic material as an interstellar cloud collapsed to form the Solar System and as the Earth accreted such material from asteroids, comets and interplanetary dust particles. In the interstellar medium of the Milky Way Galaxy more than 100 molecular species, the bulk of them organic, have been securely identified, primarily through spectroscopy at the highest radio frequencies. There is considerable evidence for significantly heavier organic molecules, particularly polycyclic aromatics, although precise identification of individual species has not yet been obtained. The so-called diffuse interstellar bands are probably important in this context. The low temperature kinetics in interstellar clouds leads to very large isotopic fractionation, particularly for hydrogen, and this signature is present in organic components preserved in carbonaceous chondritic meteorites. Outer belt asteroids are the probable parent bodies of the carbonaceous chondrites, which may contain as much as 5% organic material, including a rich variety of amino acids, purines, pyrimidines, and other species of potential prebiotic interest. Richer in volatiles and hence less thermally processed are the comets, whose organic matter is abundant and poorly characterized. Cometary volatiles, observed after sublimation into the coma, include many species also present in the interstellar medium. There is evidence that most of the Earth's volatiles may have been supplied by a 'late' bombardment of comets and carbonaceous meteorites, scattered into the inner Solar System following the formation of the giant planets. How much in the way of intact organic molecules of potential prebiotic interest survived delivery to the Earth has become an

  4. Photodissolution of soil organic matter

    USGS Publications Warehouse

    Mayer, L.M.; Thornton, K.R.; Schick, L.L.; Jastrow, J.D.; Harden, J.W.

    2012-01-01

    Sunlight has been shown to enhance loss of organic matter from aquatic sediments and terrestrial plant litter, so we tested for similar reactions in mineral soil horizons. Losses of up to a third of particulate organic carbon occurred after continuous exposure to full-strength sunlight for dozens of hours, with similar amounts appearing as photodissolved organic carbon. Nitrogen dissolved similarly, appearing partly as ammonium. Modified experiments with interruption of irradiation to include extended dark incubation periods increased loss of total organic carbon, implying remineralization by some combination of light and microbes. These photodissolution reactions respond strongly to water content, with reaction extent under air-dry to fully wet conditions increasing by a factor of 3-4 fold. Light limitation was explored using lamp intensity and soil depth experiments. Reaction extent varied linearly with lamp intensity. Depth experiments indicate that attenuation of reaction occurs within the top tens to hundreds of micrometers of soil depth. Our data allow only order-of-magnitude extrapolations to field conditions, but suggest that this type of reaction could induce loss of 10-20% of soil organic carbon in the top 10. cm horizon over a century. It may therefore have contributed to historical losses of soil carbon via agriculture, and should be considered in soil management on similar time scales. ?? 2011 Elsevier B.V.

  5. Repeated applications of compost and manure mainly affect the size and chemical nature of particulate organic matter in a loamy soil after 8 years

    NASA Astrophysics Data System (ADS)

    Peltre, Clement; Dignac, Marie-France; Doublet, Jeremy; Plante, Alain; Houot, Sabine

    2013-04-01

    Land application of exogenous organic matter (EOM) of residual origin can help to maintain or increase soil organic carbon (SOC) stocks. However, it remains necessary to quantify and predict the soil C accumulation and to determine under which form the C accumulates. Changes to the chemical composition of soil organic matter (SOM) after repeated applications of composts and farmyard manure were investigated in a field experiment (Qualiagro experiment, Ile-de-France) after 8 years of applications of green waste and sludge compost (GWS), municipal solid waste compost (MSW), biowaste compost (BIOW) or farmyard manure (FYM). The soil was fractionated into particulate organic matter >50 µm (POM), a heavy fraction >50 µm and a 0-50 µm fraction demineralized with hydrofluoric acid (HF). Repeated EOM applications significantly increased total SOC stocks, the C amount in the POM fraction and to a less extent in the 0-50 µm fraction compared to the reference treatment. Compost applications accumulated C preferentially under the form of coarse organic matter of size >50 µm, whereas the FYM accumulated similar C proportions of size >50 µm and 0-50 µm, which was attributed to the presence in the FYM of a fraction of labile C stimulating microbial activity and producing humified by-products together with a fraction of stabilized C directly alimenting the humified fraction of SOC. Pyrolysis-GC/MS and DRIFT spectroscopy revealed enrichment in lignin in the POM fractions of amended soils with GWS, BIOW and FYM. In the soil receiving MSW compost, the pyrolysate of the POM fraction revealed the presence of plastics originating from the MSW compost. A lower C mineralization during laboratory incubation was found for the POM fractions of amended soils compared with the POM from reference soil. This feature was related to a lower ratio of (furfural+acetic acid) / pyrole pyrolysis products in POM of amended vs. reference plots, indicating a higher degree of recalcitrance.. The POM

  6. Interactions of Polychlorinated Biphenyls and Organochlorine Pesticides with Sedimentary Organic Matter of Retrogressive Thaw Slump-Affected Lakes in the Tundra Uplands Adjacent to the Mackenzie Delta, NT, Canada

    NASA Astrophysics Data System (ADS)

    Eickmeyer, D.; Kimpe, L.; Kokelj, S.; Pisaric, M. F.; Smol, J. P.; Sanei, H.; Thienpont, J. R.; Blais, J. M.

    2016-12-01

    Increased incidences and severity of thermokarst activity, such as retrogressive thaw slumping, in the permafrost-rich western Canadian Arctic have been previously shown to influence basic water chemistry and sedimentation rates of affected lakes. Using a comparative spatial analysis of sediment cores from 8 lakes in tundra uplands adjacent to the Mackenzie Delta, NT, we examined how the presence of retrogressive thaw slumps on lake shores affected persistent organic pollutant (POPs, including polychlorinated biphenyls (PCB), hexa- and pentachlorobenzenes (CBz)and dichlorodiphenyltrichloroethane and metabolites (DDT)) accumulation in lake sediments. Sediments of slump-affected lakes contained higher total organic carbon (TOC)-normalized POP concentrations than nearby reference lakes that were unaffected by thaw slumps. PCB and DDT deposition rates to the sediment were not significantly different between reference and affected lakes; however, CBz flux to sediment was found to be higher in slump-affected lakes. Mean focus-corrected inorganic sedimentation rates were positively related to TOC-normalized contaminant concentrations, explaining 58 - 94% of the variation in POP concentrations in sediment, suggesting that reduced organic carbon in slump-affected lake water results in higher concentrations of POPs on sedimentary organic matter. This explanation was corroborated by an inverse relationship between sedimentary POP concentrations and TOC content of the lake water. Higher POP concentrations observed in sediment of slump-affected lakes are best explained by simple solvent switching processes of hydrophobic organic contaminants onto a smaller pool of available organic carbon when compared to neighboring lakes unaffected by thaw slump development.

  7. Do Chernobyl-like contaminations with (137)Cs and (90)Sr affect the microbial community, the fungal biomass and the composition of soil organic matter in soil?

    PubMed

    Niedrée, Bastian; Berns, Anne E; Vereecken, Harry; Burauel, Peter

    2013-04-01

    (137)Cs and (90)Sr are the main radionuclides responsible for contamination of agricultural soils due to core melts in nuclear power plants such as Chernobyl or Fukushima. The present study focused on effects of Chernobyl-like contaminations on the bacterial and fungal community structure, the fungal biomass and the formation of soil organic matter in native and in sterilized and reinoculated soils. 2% wheat straw [m/m] was applied to a typical agricultural soil, artificially contaminated with (137)Cs and (90)Sr, and it was then incubated in microcosms for three months at 20 °C and 50% of the water-holding capacity. The development of the microbial communities was monitored with 16S and 18S rDNA denaturing gradient gel electrophoresis (DGGE). The quantification of the ergosterol content was used as a proxy for changes in the fungal biomass. Changes in the soil organic matter were determined using the (13)C cross polarization/magic angle spinning nuclear magnet resonance technique ((13)C-CP/MAS NMR). Slight but significant population shifts in the DGGE gel patterns could be related to the applied radionuclides. However, radiation-induced impacts could not be seen in either the chemical composition of the soil organic matter or in the development of the fungal biomass. Impacts caused by sterilization and reinoculation prevailed in the microcosms of the present study. Contaminations with (137)Cs or (90)Sr up to 50-fold that of the hotspots occurring in Chernobyl led to minor changes in soil microbial functions suggesting a strong resilience of natural soils with respect to radioactive contamination.

  8. The contentious nature of soil organic matter.

    PubMed

    Lehmann, Johannes; Kleber, Markus

    2015-12-03

    The exchange of nutrients, energy and carbon between soil organic matter, the soil environment, aquatic systems and the atmosphere is important for agricultural productivity, water quality and climate. Long-standing theory suggests that soil organic matter is composed of inherently stable and chemically unique compounds. Here we argue that the available evidence does not support the formation of large-molecular-size and persistent 'humic substances' in soils. Instead, soil organic matter is a continuum of progressively decomposing organic compounds. We discuss implications of this view of the nature of soil organic matter for aquatic health, soil carbon-climate interactions and land management.

  9. Priming of native soil organic matter by pyrogenic organic matter

    NASA Astrophysics Data System (ADS)

    DeCiucies, Silene; Dharmakeerthi, Saman; Whitman, Thea; Woolf, Dominic; Lehmann, Johannes

    2015-04-01

    Priming, in relation to pyrogenic organic matter (PyOM), describes the change in mineralization rate of non-pyrogenic ("native") soil organic matter (nSOM) due to the addition of PyOM. Priming may be 'positive', in that the addition of pyC increases the mineralization rate of native SOM, or 'negative', in that the mineralization rate of nSOM is decreased. Reasons for increased mineralization may include: (i) co-metabolism: microbial decomposition of labile C-additions increases microbial activity, and facilitates additional decomposition of npSOC by active enzymes; (ii) stimulation: substrate additions result in lifted pH, nutrient, oxygen, or water constraints resulting in increased microbial activity. Decreased mineralization may be a result of: (i) inhibition: the opposite of stimulation whereby constraints are aggravated by substrate addition. Substrate addition may also cause inhibition by interfering with enzymes or signaling compounds; (ii) preferential substrate utilization: labile fraction of PyOM additions are preferentially used up by microbes thus causing a decrease in nSOC decomposition; (iii) sorption: organic compounds are adsorbed onto PyOM surfaces, decreasing their rate of mineralization; (iv) stabilization: formation of organo-mineral associations forms stable SOC pools. We have conducted a suite of experiments to investigate these potential interactions. In a seven year long incubation study, PyOM additions increased total OM mineralization for the first 2.5 years, was equal to control after 6.2 years, and was 3% lower after 7.1 years. Cumulative nSOM mineralization was 23% less with the PyOM additions than without, and over 60% of the added PyOM was present in the labile soil fraction after the 7.1 year incubation. Two additional incubation studies, one with and without plants, showed greater nSOM mineralization in the short term and lower nSOM mineralization over the long term. Increased nSOC mineralization due to the presence of plants was

  10. Interactions of polychlorinated biphenyls and organochlorine pesticides with sedimentary organic matter of retrogressive thaw slump-affected lakes in the tundra uplands adjacent to the Mackenzie Delta, NT, Canada

    NASA Astrophysics Data System (ADS)

    Eickmeyer, David C.; Kimpe, Linda E.; Kokelj, Steve V.; Pisaric, Michael F. J.; Smol, John P.; Sanei, Hamed; Thienpont, Joshua R.; Blais, Jules M.

    2016-02-01

    Using a comparative spatial analysis of sediment cores from eight lakes in tundra uplands adjacent to the Mackenzie Delta, NT, we examined how the presence of retrogressive thaw slumps on lake shores affected persistent organic pollutant (POPs, including polychlorinated biphenyls and organochlorine pesticides) accumulation in lake sediments. Sediments of slump-affected lakes contained higher total organic carbon (TOC)-normalized POP concentrations than nearby reference lakes that were unaffected by thaw slumps. Mean focus-corrected inorganic sedimentation rates were positively related to TOC-normalized contaminant concentrations, explaining 58-94% of the variation in POP concentrations in sediment, suggesting that reduced organic carbon in slump-affected lake water results in higher concentrations of POPs on sedimentary organic matter. This explanation was corroborated by an inverse relationship between sedimentary POP concentrations and TOC content of the lake water. Inferred chlorophyll a, S2, and S3 carbon fluxes to sediment were not significantly correlated to POP fluxes. Higher POP concentrations observed in sediment of slump-affected lakes are best explained by simple solvent switching processes of hydrophobic organic contaminants onto a smaller pool of available organic carbon when compared to neighboring lakes unaffected by thaw slump development.

  11. Complexation of trace metals by adsorbed natural organic matter

    USGS Publications Warehouse

    Davis, J.A.

    1984-01-01

    The adsorption behavior and solution speciation of Cu(II) and Cd(II) were studied in model systems containing colloidal alumina particles and dissolved natural organic matter. At equilibrium a significant fraction of the alumina surface was covered by adsorbed organic matter. Cu(II) was partitioned primarily between the surface-bound organic matter and dissolved Cu-organic complexes in the aqueous phase. Complexation of Cu2+ with the functional groups of adsorbed organic matter was stronger than complexation with uncovered alumina surface hydroxyls. It is shown that the complexation of Cu(II) by adsorbed organic matter can be described by an apparent stability constant approximately equal to the value found for solution phase equilibria. In contrast, Cd(II) adsorption was not significantly affected by the presence of organic matter at the surface, due to weak complex formation with the organic ligands. The results demonstrate that general models of trace element partitioning in natural waters must consider the presence of adsorbed organic matter. ?? 1984.

  12. Soil zinc and cadmium availability and uptake by wheat (Triticum aestivum L.) as affected by long-term organic matter management

    NASA Astrophysics Data System (ADS)

    Grüter, Roman; Costerousse, Benjamin; Mayer, Jochen; Mäder, Paul; Thonar, Cécile; Frossard, Emmanuel; Schulin, Rainer; Tandy, Susan

    2017-04-01

    Zinc (Zn) deficiency is a widespread problem in human mineral nutrition. It is mainly caused by imbalanced diets with low contents of bioavailable Zn. This is in particular a problem in populations depending on cereals such as wheat (Triticum aestivum L.) as a major source of this essential micronutrient element. Increasing Zn concentrations in wheat grains (biofortification) is therefore an important challenge. At the same time, increased uptake of the toxic heavy metal cadmium (Cd) must be prevented. Agronomic practises influence soil properties such as pH and soil organic carbon and thus also have an indirect effect on phytoavailable soil Zn and Cd concentrations and the uptake of these metals by wheat in addition to direct inputs with fertilizers and other amendments. This study investigated the effects of long-term organic matter management on the phytoavailability of soil Zn and Cd and their uptake by wheat on plots of two Swiss long-term field trials. In one trial (DOK), a farming system comparison trial established in 1978, we compared plots under conventional management with mineral fertilization either in combination or not with farmyard manure application to plots under biodynamic organic management and control plots with no fertilizer application. In the second trial (ZOFE), established in 1949, we compared different fertilizer regimes on conventionally managed plots, including plots with application of mineral fertilizers only, farmyard manure, or compost and control plots with no fertilizer application. Soil physico-chemical and biological properties were determined at the beginning of the growing season. Soil Zn and Cd availabilities were assessed by the Diffusive Gradients in Thin Films (DGT) method and by DTPA extraction before and after wheat cultivation. Additionally, various wheat yield components and element concentrations in shoots and grains were measured at harvest. In the ZOFE trial, soil Zn and Cd concentrations were lowest in the mineral

  13. Environmental factors regulating soil organic matter chlorination

    NASA Astrophysics Data System (ADS)

    Svensson, Teresia; Montelius, Malin; Reyier, Henrik; Rietz, Karolina; Karlsson, Susanne; Lindberg, Cecilia; Andersson, Malin; Danielsson, Åsa; Bastviken, David

    2016-04-01

    Natural chlorination of organic matter is common in soils. Despite the widespread abundance of soil chlorinated soil organic matter (SOM), frequently exceeding soil chloride abundance in surface soils, and a common ability of microorganisms to produce chlorinated SOM, we lack fundamental knowledge about dominating processes and organisms responsible for the chlorination. To take one step towards resolving the terrestrial chlorine (Cl) puzzle, this study aims to analyse how environmental factors influence chlorination of SOM. Four factors were chosen for this study: soil moisture (W), nitrogen (N), chloride (Cl) and organic matter quality (C). These factors are all known to be important for soil processes. Laboratory incubations with 36Cl as a Cl tracer were performed in a two soil incubation experiments. It was found that addition of chloride and nitrogen seem to hamper the chlorination. For the C treatment, on the other hand, the results show that chlorination is enhanced by increased availability of labile organic matter (glucose and maltose). Even higher chlorination was observed when nitrogen and water were added in combination with labile organic matter. The effect that more labile organic matter strongly stimulated the chlorination rates was confirmed by the second separate experiment. These results indicate that chlorination was not primarily a way to cut refractory organic matter into digestible molecules, representing one previous hypothesis, but is related with microbial metabolism in other ways that will be further discussed in our presentation.

  14. Natural dissolved organic matter mobilizes Cd but does not affect the Cd uptake by the green algae Pseudokirchneriella subcapitata (Korschikov) in resin buffered solutions.

    PubMed

    Verheyen, Liesbeth; Versieren, Liske; Smolders, Erik

    2014-09-01

    Natural dissolved organic matter (DOM) can have contrasting effects on metal bioaccumulation in algae because of complexation reactions that reduce free metal ion concentrations and because of DOM adsorption to algal surfaces which promote metal adsorption. This study was set up to reveal the role of different natural DOM samples on cadmium (Cd) uptake by the green algae Pseudokirchneriella subcapitata (Korschikov). Six different DOM samples were collected from natural freshwater systems and isolated by reverse osmosis. In addition, one (13)C enriched DOM sample was isolated from soil to trace DOM adsorption to algae. Algae were exposed to standardized solutions with or without these DOM samples, each exposed at equal DOM concentrations and at equal non-toxic Cd(2+) activity (∼4 nM) that was buffered with a resin. The DOM increased total dissolved Cd by factors 3-16 due to complexation reactions at equal Cd(2+) activity. In contrast, the Cd uptake was unaffected by DOM or increased maximally 1.6 fold ((13)C enriched DOM). The (13)C analysis revealed that maximally 6% of algal C was derived from DOM and that this can explain the small increase in biomass Cd. It is concluded that free Cd(2+) and not DOM-complexed Cd is the main bioavailable form of Cd when solution Cd(2+) is well buffered. Copyright © 2014 Elsevier B.V. All rights reserved.

  15. Spatial Correlation of Soil Organic Matter and Pedogenic Oxides in Permafrost-Affected Soils of Northern Siberia at the Profile Scale

    NASA Astrophysics Data System (ADS)

    Evgrafova, Alevtina; Haase, Ina; Guggenberger, Georg; Shibistova, Olga; Tananaev, Nikita; Mann, Brigitte; Sauheitl, Leopold; Spielvogel, Sandra

    2015-04-01

    The organic carbon (OC) and nitrogen (N) of permafrost-affected soils are highly vulnerable to warming brought on by climate change. Detailed research on the pedogenesis and soil properties of permafrost-affected soils plays a key role in characterizing and quantifying the terrestrial carbon and N cycles. This study was carried out in northern Siberia, at the Little Grawiika Creek catchment (67°28.933' N, 86°25.682' E) that is located on the eastern riverside of the Yenisei River, Krasnoyarsk Krai, Russian Federation. The aim of the study was to conduct research focused on the spatial distribution and relationship of OC and N in permafrost-affected soils that were divided into four groups based on the depth of permafrost table. 13 pits were opened to the depth of their respective permafrost table and the spatially referenced soil samples were collected, each within an 80 cm wide grid and 10 cm mesh size to obtain a high spatial resolution. In order to quantify the spatial distribution and spatial correlation of OC and N stocks in permafrost-affected soils at the profile scale, geostatistical approaches such as simple kriging, ordinary kriging, universal kriging and ordinary cokriging were applied and compared by cross validation. Spatial analysis of pH, content of pedogenic oxides, soil structure and vegetation data were used to determine their influence on the distribution of OC and N stocks at the profile scale. The quality of the OC and N distribution maps is enhanced considerably by cokriging as compared to distribution maps which use simple, ordinary or universal kriging approaches; this is demonstrated by distinctly lower root mean square errors. The nugget-to-sill ratio decreases with an increase in active layer depth, which confirms that vertical variability of soil OC and N stocks decreases with permafrost thaw. Moreover, the range of autocorrelation of OC and N stocks increases considerably with active layer depth.

  16. Chemodestructive fractionation of soil organic matter

    NASA Astrophysics Data System (ADS)

    Popov, A. I.; Rusakov, A. V.

    2016-06-01

    The method of chemodestructive fractionation is suggested to assess the composition of soil organic matter. This method is based on determination of the resilience of soil organic matter components and/or different parts of organic compounds to the impact of oxidizing agents. For this purpose, a series of solutions with similar concentration of the oxidant (K2Cr2O7), but with linearly increasing oxidative capacity was prepared. Chemodestructive fractionation showed that the portion of easily oxidizable (labile) organic matter in humus horizons of different soil types depends on the conditions of soil formation. It was maximal in hydromorphic soils of the taiga zone and minimal in automorphic soils of the dry steppe zone. The portion of easily oxidizable organic matter in arable soils increased with an increase in the rate of organic fertilizers application. The long-lasting agricultural use of soils and burying of the humus horizons within the upper one-meter layer resulted in the decreasing content of easily oxidizable organic matter. It was found that the portion of easily oxidizable organic matter decreases by the mid-summer or fall in comparison with the spring or early summer period.

  17. Carbon storage in soil: how different land uses affect particulate organic matter composition. A molecular approach using nuclear magnetic resonance spectroscopy.

    NASA Astrophysics Data System (ADS)

    Panettieri, Marco; Courtier-Murias, Denis; Rumpel, Cornelia; Dignac, Marie-France; Doumert, Bertrand; Chabbi, Abad

    2017-04-01

    The future soil carbon stocks in a climate change scenario is being closely monitored. However, the huge edaphoclimatic variability impedes to disclose the mechanisms which underlie the cycle of accumulation/mineralization of soil organic matter (SOM). Soil environment could be described as a complex three phases matrix in which gases, liquids, and solids are not uniformly mixed, and in which microbes, fungi, vegetal residues, and roots are continuously interacting with the soil matrix and with each other. Molecular analyses on soil samples are crucial to estimate how stable those pools are and to predict which practices may accumulate larger C stocks. However, the study of land use impact through molecular characterization of a complex mixture like SOM is a challenge that requires a multidisciplinary approach. The present study applied a combination of soil physical fractionation (separation by density of the particulate organic matter (POM) within water stable aggregate fractions) followed by nuclear magnetic resonance (NMR) spectroscopy as a way to overcome spatial variability and to quantify the changes in the composition of SOM induced by land-use changes. The objective of the study was to assess, at a molecular level, the impact of different land managements, i.e. the introduction of temporary (ley) grassland into cropping cycles, on the chemical composition of SOM. Soil samples were collected at the long-term experimental observatory in Lusignan (http://www.soere-acbb.com/), in which control plots under permanent grassland, permanent cropland, and bare fallow are part of the experiment. To improve the signal-to-noise ratio (especially in the aromatic-C region), samples were analyzed using a ramped cross polarization-single pulse/magic angle spinning (CPSP/MAS) experiment. Peak integrals of different spectral regions (indicating different compound classes) were compared between treatments and two different molecular mixing models, calibrated against standard

  18. Adsorption of acid-extractable organics from oil sands process-affected water onto biomass-based biochar: Metal content matters.

    PubMed

    Bhuiyan, Tazul I; Tak, Jin K; Sessarego, Sebastian; Harfield, Don; Hill, Josephine M

    2017-02-01

    The impact of biochar properties on acid-extractable organics (AEO) adsorption from oil sands process-affected water (OSPW) was studied. Biochar from wheat straw with the highest ash content (14%) had the highest adsorption capacity (0.59 mg/g) followed by biochar from pulp mill sludge, switchgrass, mountain pine, hemp shives, and aspen wood. The adsorption capacity had no obvious trend with surface area, total pore volume, bulk polarity and aromaticity. The large impact of metal content was consistent with the carboxylates (i.e., naphthenate species) in the OSPW binding to the metals (mainly Al and Fe) on the carbon substrate. Although the capacity of biochar is still approximately two orders of magnitude lower than that of a commercial activated carbon, confirming the property (i.e., metal content) that most influenced AEO adsorption, may allow biochar to become competitive with activated carbon after normalizing for cost, especially if this cost includes environmental impacts.

  19. What is soil organic matter worth?

    PubMed

    Sparling, G P; Wheeler, D; Vesely, E-T; Schipper, L A

    2006-01-01

    The conservation and restoration of soil organic matter are often advocated because of the generally beneficial effects on soil attributes for plant growth and crop production. More recently, organic matter has become important as a terrestrial sink and store for C and N. We have attempted to derive a monetary value of soil organic matter for crop production and storage functions in three contrasting New Zealand soil orders (Gley, Melanic, and Granular Soils). Soil chemical and physical characteristics of real-life examples of three pairs of matched soils with low organic matter contents (after long-term continuous cropping for vegetables or maize) or high organic matter content (continuous pasture) were used as input data for a pasture (grass-clover) production model. The differences in pasture dry matter yields (non-irrigated) were calculated for three climate scenarios (wet, dry, and average years) and the yields converted to an equivalent weight and financial value of milk solids. We also estimated the hypothetical value of the C and N sequestered during the recovery phase of the low organic matter content soils assuming trading with C and N credits. For all three soil orders, and for the three climate scenarios, pasture dry matter yields were decreased in the soils with lower organic matter contents. The extra organic matter in the high C soils was estimated to be worth NZ$27 to NZ$150 ha(-1) yr(-1) in terms of increased milk solids production. The decreased yields from the previously cropped soils were predicted to persist for 36 to 125 yr, but with declining effect as organic matter gradually recovered, giving an accumulated loss in pastoral production worth around NZ$518 to NZ$1239 ha(-1). This was 42 to 73 times lower than the hypothetical value of the organic matter as a sequestering agent for C and N, which varied between NZ$22,963 to NZ$90,849 depending on the soil, region, discount rates, and values used for carbon and nitrogen credits.

  20. Sediment extracted organic matter fluorescence: an archive of organic matter flux and origins?

    NASA Astrophysics Data System (ADS)

    Stedmon, C. A.; Funkey, C. P.; Conley, D. J.

    2016-02-01

    Organic matter buried in sediments contain a record of the intensity and characteristics of organic matter supply from overlying waters through time. A fraction of the organic matter pool can be extracted and characterised using UV-visible spectroscopy (absorption and fluorescence). In this study we investigate the utility of using the optical characteristics of this organic matter pool as a quantitative and qualitative proxy. We use the optical properties of based extracted organic matter from a well characterised Baltic Sea core from the Northern Gotland Deep to infer changes in the intensity and character of organic matter supply over the past 8000 years. Over this period the modern Baltic Sea was formed from its original state as the Ancylus Lake. There are three clear periods of hypoxia which have influenced the supply and quality of organic matter in sediments. The first two periods, the Ancylus-Littorina transgression (7000-4000 B.P.) and Medieval Climate Anomaly (1400-700 years B.P.) are attributed to enhanced stratification. The third is recognised as driven by anthropogenic eutrophication over the past 100 years. The optical properties of sediment extracted organic matter from these periods not only follow the trends in sediment organic carbon content but also show clear differences organic matter characteristics not apparent in other measurements. The series of hypoxic events within the Ancylus-Littorina transgression differ from each other. While organic matter from 7000-6500 years BP is similar to that from MCA and modern times, subsequent Ancylus-Littorina transgression periods of hypoxia are different suggesting different origins of organic matter. Organic matter optical characteristics here are more similar to material from periods will less/no hypoxia.

  1. Diffusion and emissions of 1,3-dichloro propene in Florida sandy soil in microplots affected by soil moisture, organic matter, and plastic film.

    PubMed

    Thomas, John E; Allen, L Hartwell; McCormack, Leslie A; Vu, Joseph C; Dickson, Donald W; Ou, Li-Tse

    2004-04-01

    The main objective of this study was to determine the influence of soil moisture, organic matter amendment and plastic cover (a virtually impermeable film, VIF) on diffusion and emissions of (Z)- and (E)-1,3-dichloropropene (1,3-D) in microplots of Florida sandy soil (Arredondo fine sand). Upward diffusion of the two isomers in the Arredondo soil without a plastic cover was greatly influenced by soil-water content and (Z)-1,3-D diffused faster than (E)-1,3-D. In less than 5 h after 1,3-D injection to 30 cm depth, (Z)- and (E)-1,3-D in air dry soil had diffused to a 10 cm depth, whereas diffusion for the two isomers was negligible in near-water-saturated soil, even 101 h after injection. The diffusion rate of (Z)- and (E)-1,3-D in near-field-capacity soil was between the rates in the two water regimes. Yard waste compost (YWC) amendment greatly reduced diffusion of (Z)- and (E)-1,3-D, even in air-dry soil. Although upward diffusion of (Z)- and (E)-1,3-D in soil with VIF cover was slightly less than in the corresponding bare soil; the cover promoted retention of vapors of the two isomers in soil pore air in the shallow subsurface. More (Z)-1,3-D vapor was found initially in soil pore air than (E)-1,3-D although the difference declined thereafter. As a result of rapid upward movement in air-dry bare soil, (Z)- and (E)-1,3-D were rapidly volatilized into the atmosphere, but emissions from the near-water-saturated soil were minimal. Virtually impermeable film and YWC amendment retarded emissions. This study indicated that adequate soil water in this sandy soil is needed to prevent rapid emissions, but excess soil water slows diffusion of (Z)- and (E)-1,3-D. Thus, management for optimum water in soil is critical for pesticidal efficacy and the environment.

  2. Soil organic matter mineralization in frozen soils

    NASA Astrophysics Data System (ADS)

    Harrysson Drotz, S.; Sparrman, T.; Schleucher, J.; Nilsson, M.; Öquist, M. G.

    2009-12-01

    Boreal forest soils are frozen for a large part of the year and soil organic matter mineralization during this period has been shown to significantly influence the C balance of boreal forest ecosystems. Mineralization proceeds through heterotrophic microbial activity, but the understanding of the environmental controls regulating soil organic matter mineralization under frozen conditions is poor. Through a series of investigations we have addressed this issue in order to elucidate to what extent a range of environmental factors control mineralization processes in frozen soils and also the microbial communities potential to oxidize organic substrates and grow under such conditions. The unfrozen water content in the frozen soils was shown to be an integral control on the temperature response of biogenic CO2 production across the freezing point of bulk soil water. We found that osmotic potential was an important contributor to the total water potential and, hence, the unfrozen water content of frozen soil. From being low and negligible in an unfrozen soil, the osmotic potential was found to contribute up to 70% of the total water potential in frozen soil, greatly influencing the volume of liquid water. The specific factors of how soil organic matter composition affected the unfrozen water content and CO2 production of frozen soil were studied by CP-MAS NMR. We concluded that abundance of aromatics and recalcitrant compounds showed a significant positive correlation with unfrozen water content and these were also the major soil organic fractions that similarly correlated with the microbial CO2 production of the frozen soils. Thus, the hierarchy of environmental factors controlling SOM mineralization changes as soils freeze and environmental controls elucidated from studies of unfrozen systems can not be added on frozen conditions. We have also investigated the potential activity of soil microbial communities under frozen conditions in order to elucidate temperature

  3. Effects of Crayfish on Quality of Fine Particulate Organic Matter

    NASA Astrophysics Data System (ADS)

    Montemarano, J. J.; Kershner, M. W.; Leff, L. G.

    2005-05-01

    The origin and ontogeny of detritus often determines its bioavailability. Crayfish shred and consume detrital organic matter, influencing fine particulate organic matter (FPOM) availability, composition and quality. Given consumption of FPOM by many invertebrates, crayfish can indirectly affect these organisms by altering FPOM bioavailability through organic matter fragmentation, biofilm disturbance, and defecation. These effects may or may not vary among coarse particulate organic matter (CPOM) from different leaf species. To assess crayfish effects on FPOM quality, crayfish were fed stream-conditioned maple or oak leaves in hanging 1-mm mesh-bottom baskets in aquaria. After 12 h, crayfish and remaining leaves were removed. FPOM fragments that fell through the mesh were vacuum filtered and analyzed for percent organic matter, C:N ratio, and bacterial abundance. The same analyses were conducted on crayfish feces collected using finger cots encasing crayfish abdomens. C:N ratios did not differ between feces and maple leaf CPOM, but were lower in FPOM produced through fragmentation and disturbance (P = 0.023). Overall, crayfish alter the ontogeny of detritus, which may, in turn, affect stream FPOM dynamics.

  4. Factors Regulating Soil Organic Matter Chlorination

    NASA Astrophysics Data System (ADS)

    Svensson, T.; Gustavsson, M.; Reyier, H.; Rietz, K.; Karlsson, S.; Göransson, C.; Andersson, M.; Öberg, G.; Bastviken, D.

    2013-12-01

    Natural chlorination of organic matter is a common process in various soils. Despite the widespread abundance of soil organic chlorine, knowledge on the processes and regulation of soil organic matter chlorination are modest. The purpose of this study is to elucidate how environmental factors may influence chlorination of organic matter in soil. Four factors were chosen for this study; water content, and nitrogen, organic carbon, and chloride concentrations. The variables are all known in different ways as important for microbes and transformation of chlorine in soil. The soil was collected from 5-15 cm depth in a coniferous forest southeast of Sweden. To test how the selected factors influenced chlorination of organic matter, we used soil laboratory incubations using 36Cl-chloride as a radioisotopic marker. A multivariate factorial design with two levels of i) soil moisture, ii) chloride amendment, iii) nitrogen amendment, and iv) glucose and maltose addition was used to simultaneously test for possible combination effects for all factors. A known radioactivity of 36chloride was added to the soil samples and incubated with four different factor treatments during an incubation period of 15 and 60 days. This presentation will discuss the results of this study including what combination of factors enhanced or hampered chlorination and thereby discuss previous observed variability of organic chlorine and chloride in soil.

  5. Composition and reactivity of ferrihydrite-organic matter associations

    NASA Astrophysics Data System (ADS)

    Eusterhues, Karin; Hädrich, Anke; Neidhardt, Julia; Küsel, Kirsten; Totsche, Kai

    2014-05-01

    The formation of organo-mineral associations affects many soil forming processes. On the one hand, it will influence soil organic matter composition and development, because the complex organic matter mixtures usually fractionate during their association with mineral surfaces. Whereas the associated fraction is supposed to be stabilized, the non-associated fraction remains mobile and available to degradation by microorganisms. On the other hand, the organic coating will completely change the interface properties of Fe oxides such as solubility, charge and hydrophobicity. This in turn will strongly influence their reactivity towards nutrients and pollutants, the adsorption of new organic matter, and the availability of ferric Fe towards microorganisms. To better understand such processes we produced ferrihydrite-organic matter associations by adsorption and coprecipitation in laboratory experiments. As a surrogate for dissolved soil organic matter we used the water-extractable fraction of a Podzol forest-floor layer under spruce. Sorptive fractionation of the organic matter was investigated by 13C NMR and FTIR. Relative to the original forest-floor extract, the ferrihydrite-associated OM was enriched in polysaccharides but depleted in aliphatic C and carbonyl C, especially when adsorption took place. Liquid phase incubation experiments were carried out with an inoculum extracted from the podzol forest-floor under oxic conditions at pH 4.8 to quantify the mineralization of the adsorbed and coprecipitated organic matter. These experiments showed that the association with ferrihydrite stabilized the associated organic matter, but that differences in the degradability of adsorbed and coprecipitated organic matter were small. We therefore conclude that coprecipitation does not lead to a significant formation of microbial inaccessible organic matter domains. Microbial reduction experiments were performed using Geobacter bremensis. We observed that increasing amounts of

  6. Spectral mapping of soil organic matter

    NASA Technical Reports Server (NTRS)

    Kristof, S. J.; Baumgardner, M. F.; Johannsen, C. J.

    1974-01-01

    Multispectral remote sensing data were examined for use in the mapping of soil organic matter content. Computer-implemented pattern recognition techniques were used to analyze data collected in May 1969 and May 1970 by an airborne multispectral scanner over a 40-km flightline. Two fields within the flightline were selected for intensive study. Approximately 400 surface soil samples from these fields were obtained for organic matter analysis. The analytical data were used as training sets for computer-implemented analysis of the spectral data. It was found that within the geographical limitations included in this study, multispectral data and automatic data processing techniques could be used very effectively to delineate and map surface soils areas containing different levels of soil organic matter.

  7. Priming of Native Soil Organic Matter by Pyrogenic Organic Matter

    NASA Astrophysics Data System (ADS)

    DeCiucies, S.; Lehmann, J.; Woolf, D.; Whitman, T.

    2016-12-01

    Within the global carbon (C) cycle, soil C makes up a critical and active pool. Pyrogenic C, (PyC) or black C, contributes to this pool, and has been shown to change the turnover rate of the non-pyrogenic soil organic carbon (nSOC) associated with it. This change in rate of mineralization is referred to as priming, which can be negative or positive. There are many possible mechanisms that may be causing this priming effect, both biological and chemical. This study employs incubation experiments to identify and parse these potential mechanisms, focusing on negative priming mechanisms which may have importance in global carbon storage and carbon cycling models. Continuous respiration measurements of soil/char and soil/biomass incubations using isotopically labeled biomass (13C and 15N) indicate that priming interactions are more significant in soils with higher carbon contents, and that higher temperature chars induce more negative priming over time. Current incubations are exploring the effects of chars pyrolyzed at different temperatures, chars extracted of DOC versus non-extracted, soils with differing carbon contents, and the effects of pH and nutrient adjusting incubations. We will continue to examine the contribution of the different mechanisms by isolating variables such as nutrient addition, soil texture, char application rate, and mineral availability. We anticipate that sorption on PyOM surfaces are important in nSOM stabilization and will continue to study these effects using highly labeled substrates and nano secondary ion mass spectrometry (nano-SIMS).

  8. Organic Matter in the Contemporary Ocean

    NASA Astrophysics Data System (ADS)

    Eglinton, T. I.; Repeta, D. J.

    2003-12-01

    This chapter summarizes selected aspects of our current understanding of the organic carbon (OC) cycle as it pertains to the modern ocean, including underlying surficial sediments. We briefly review present estimates of the size of OC reservoirs and the fluxes between them. We then proceed to highlight advances in our understanding that have occurred since the late 1980s, especially those which have altered our perspective of the ways organic matter is cycled in the oceans. We have focused on specific areas where substantial progress has been made, although in most cases our understanding remains far from complete. These are the fate of terrigenous OC inputs in the ocean, the composition of oceanic dissolved organic matter (DOM), the mechanisms of OC preservation, and new insights into microbial inputs and processes. In each case, we discuss prevailing hypotheses concerning the composition and fate of organic matter derived from the different inputs, the reactivity and relationships between different organic matter pools, and highlight current gaps in our knowledge.The advances in our understanding of organic matter cycling and composition has stemmed largely from refinements in existing methodologies and the emergence of new analytical capabilities. Molecular-level stable carbon and nitrogen isotopic measurements have shed new light on a range of biogeochemical processes. Natural abundance of radiocarbon data has also been increasingly applied as both a tracer and source indicator in studies of organic matter cycling. As for 13C, bulk 14C measurements are now complemented by measurements at the molecular level, and the combination of these different isotopic approaches has proven highly informative. The application of multinuclear solid- and liquid-state nuclear magnetic resonance (NMR) spectroscopy has provided a more holistic means to examine the complex array of macromolecules that appears to comprise both dissolved and particulate forms of organic matter. New

  9. FACTORS INFLUENCING PHOTOREACTIONS OF DISSOLVED ORGANIC MATTER IN A COASTAL RIVER OF THE SOUTHEASTERN UNITED STATES

    EPA Science Inventory

    Photoreactions of dissolved organic matter can affect the oxidizing capacity, nutrient dynamics, trace gas exchange, and color of surface waters. This study focuses on factors that affect the photoreactions of the colored dissolved organic matter (CDOM) in the Satilla River, a co...

  10. FACTORS INFLUENCING PHOTOREACTIONS OF DISSOLVED ORGANIC MATTER IN A COASTAL RIVER OF THE SOUTHEASTERN UNITED STATES

    EPA Science Inventory

    Photoreactions of dissolved organic matter can affect the oxidizing capacity, nutrient dynamics, trace gas exchange, and color of surface waters. This study focuses on factors that affect the photoreactions of the colored dissolved organic matter (CDOM) in the Satilla River, a co...

  11. [Infrared spectroscopy application in soil organic matter].

    PubMed

    Wu, J; Xi, S; Jiang, Y

    1998-02-01

    As an important method to study the constitution and properties of macromolecular organic compounds, the infrared spectroscopy has been more and more widely taken in the researches of soil organic matters (SOM). Especially,the application of FTIR and the combined uses of FTIR with chromatogram etc. have made the researches of SOM get a great progress in many aspects. In this paper, the infrared spectroscopy applications were reviewed in SOM. It includes the following contents: the methods to study SOM by IR, studies on the constitution of soil humic substances (SHS), extraction of SOM and classification of SHS, decomposition, transformation and humification of organic matters, the differences of SOM in different situations, the interactions of SHS with metais, clay minerals and other organics in soil.

  12. Pedogenesis evolution of mine technosols: focus onto organic matter implication

    NASA Astrophysics Data System (ADS)

    Grégoire, Pascaud; Marilyne, Soubrand; Laurent, Lemee; Husseini Amelène, El-Mufleh Al; Marion, Rabiet; Emmanuel, Joussein

    2014-05-01

    lipidic fractions. The sampling allows to observe natural mine Technosol organic matter for different exploitation type and different solum ages. The quantity and composition of organic matter vary according to soil depth and the soil profiles. The thermochemolysis of these soils shows a wide array of molecules from various origins: some are ubiquitous, other more specific to the microbial or plants presence. In addition, molecules resulting from the reaction with the parental material are highlighted for one soil profile. The results give a large evidence of similarities between mine soil and non-anthropized soil. But it seems to appear that the organic matters are affected by the mine technosols specificities. Theses relations between soil organic matters and the specific mineral background of mine soils will be discussed in relation to the general pedological functioning of non-anthropized soil.

  13. Response of organic matter quality in permafrost soils to warming

    NASA Astrophysics Data System (ADS)

    Plaza, C.; Pegoraro, E.; Schuur, E.

    2016-12-01

    Global warming is predicted to thaw large quantities of the perennially frozen organic matter stored in northern permafrost soils. Upon thaw, this organic matter will be exposed to lateral export to water bodies and to microbial decomposition, which may exacerbate climate change by releasing significant amounts of greenhouse gases. To gain an insight into these processes, we investigated how the quality of permafrost soil organic matter responded to five years of warming. In particular, we sampled control and experimentally warmed soils in 2009 and 2013 from an experiment established in 2008 in a moist acidic tundra ecosystem in Healy, Alaska. We examined surface organic (0 to 15 cm), deep organic (15 to 35 cm), and mineral soil layers (35 to 55 cm) separately by means of stable isotope analysis (δ13C and δ15N) and solid-state 13C nuclear magnetic resonance. Compared to the control, the experimental warming did not affect the isotopic and molecular composition of soil organic matter across the depth profile. However, we did find significant changes with time. In particular, in the surface organic layer, δ13C decreased and alkyl/O-alkyl ratio increased from 2009 to 2013, which indicated variations in soil organic sources (e.g., changes in vegetation) and accelerated decomposition. In the deep organic layer, we found a slight increase in δ15N with time. In the mineral layer, δ13C values decreased slightly, whereas alkyl C/O-alkyl ratio increased, suggesting a preferential loss of relatively more degraded organic matter fractions probably by lateral transport by water flowing through the soil. Acknowledgements: This project has received funding from the European Union's Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No. 654132. Web site: http://vulcan.comule.com

  14. Does anthracene affect microbial activities and organic matter decomposition? A comparative study in Pinus halepensis litters from Mediterranean coastal and inland areas.

    PubMed

    Qasemian, Leila; Guiral, Daniel; Ziarelli, Fabio; Ruaudel, Florence; Farnet, Anne-Marie

    2012-10-01

    The widespread concern about pollution caused by Polycyclic Aromatic Hydrocarbons (PAHs) raises the question of how they affect soil microbial communities which are potentially involved in the transformation of these pollutants. Using microcosms, we describe the effect of anthracene, a model PAH, on microbial communities inhabiting a Pinus halepensis litter from both coastal (COS) and inland (INL) Mediterranean sites. The microcosms were incubated over 3 months (25°C, 60% WHC) and the effects of anthracene on microbial activities of both litters were monitored. Different enzyme activities (laccase, cellulase, β-glucosidase and acid phosphatase) and microbial respiration were measured and variations in litter chemical composition over incubation were determined using (13)C Nuclear Magnetic Resonance (NMR) from both sites. Our results show that lignocellulolytic enzymes increased markedly after a 3-month incubation in COS microcosms, especially in the presence of anthracene, whereas INL microcosms were not similarly affected. These results show that anthracene not only has no toxic effect on the microbial activities tested but actually enhances the lignocellulolytic activities of the fungal communities from coastal litters, demonstrating the detoxification potential and resistance of stressed Mediterranean coastal ecosystems.

  15. Phytotoxic effects of terrestrial dissolved organic matter on a freshwater cyanobacteria and green algae species is affected by plant source and DOM chemical composition.

    PubMed

    Neilen, Amanda D; Hawker, Darryl W; O'Brien, Katherine R; Burford, Michele A

    2017-10-01

    Here we link plant source phylogeny to its chemical characteristics and determine parameters useful for predicting DOM phytotoxicity towards algal monocultures. We found that DOM characterised using UV-visible spectroscopic indices and elemental analysis is useful for distinguishing DOM plant sources. Specifically, combined values of absorbance at 440 nm and coefficients for the spectral slope ratio, were used to distinguish between gymnosperm-leached DOM and that from angiosperms. In our bioassays, DOM leached from 4 g leaf L(-1) resulted in over 40% inhibition of photosynthetic yield for the cyanobacterium, Cylindrospermopsis raciborskii, for eight of the nine plants tested. Significant variables for predicting inhibition of yield were DOM exposure time and plant source, or using an alternate model, exposure time and spectroscopic and elemental measures. Our study proposes spectroscopic indices which can estimate a plant source's contribution to aquatic DOM, may provide insights into ecological outcomes, such as phytotoxicity to algae. The cyanobacterium (C. raciborskii) was more sensitive to DOM than a green algae (Monoraphidium spp.), as identified in a subsequent dose-response experiment with five different DOM plant sources. Low level additions of angiosperm derived-DOM (i.e. 0.5 g L(-1)) were slight phytotoxic to Monoraphidium spp. causing 30% inhibition of yield, while C. raciborskii was not affected. Higher DOM additions (i.e. 2 g L(-1)) caused 100% inhibition of yield for C. raciborskii, while Monoraphidium spp. inhibition remained under 30%. The divergence in algal sensitivity to DOM indicates that in aquatic systems, DOM derived from catchment vegetation has the potential to affect algal assemblages. Copyright © 2017 Elsevier Ltd. All rights reserved.

  16. Lability of Secondary Organic Particulate Matter

    SciTech Connect

    Liu, Pengfei; Li, Yong Jie; Wang, Yan; Giles, Mary K.; Zaveri, Rahul A.; Bertram, Allan K.; Martin, Scot T.

    2016-10-24

    Accurate simulations of the consenctrations of atmospheric organic particulate matter (PM) are needed for predicting energy flow in the Earth’s climate system. In the past, simulations of organic PM widely assume equilibrium partitioning of semivolatile organic compounds (SVOCs) between the PM and surrounding vapor. Herein, we test this assumption by measuring evaporation rates and associated vapor mass concentration of organic films representative of atmospheric PM. For films representing anthropogenic PM, evaporation rates and vapor mass concentrations increased above a threshold relative humidity (RH), indicating equilibrium partitioning above a transition RH but not below. In contrast for films representing biogenic PM, no threshold was observed, indicating equilibrium partitioning at all RHs. The results suggest that the mass lability of atmospheric organic PM can differ in consequential ways among Earth’s natural biomes, polluted regions, and regions of land-use change, and these differences need to be considered when simulating atmospheric organic PM.

  17. Rapid determination of organic matter in spent sulfuric acid

    SciTech Connect

    Petrenko, V.G.; Takhtaeva, A.Ya.; Frolova, R.P.

    1981-01-01

    Ammonium sulfate is produced with the aid of spent sulfuric acid which averages 0.3 to 0.7% (and sometimes up to 2.5%) of carbon in the form of organic impurities. In the saturator, the latter upset the processing conditions and lower the quality (size analysis, etc.) of the ammonium sulfate. A rapid quality control procedure is essential to obtain timely warning of increased organic matter contents in the acid. On the other hand, the standard procedure in current use (TU38-2-3-1-68), based on the oxidation of organic substances with potassium bichromate in an acid medium, takes 3 hr to complete. Observations have revealed a correlation between the color of the acid and its organic impurity contents. On this basis, we have developed a rapid photocolorimetric procedure for determining the organic impurity contents of sulfuric acid, based on the known proportionality between optical density (light absorption) and solute (dye) content. A calibration curve is used to convert optical density readings to organic impurity contents. It should be pointed out that in contrast to the standard procedure, our procedure only determines the concentration of organic matter in solution in the acid. However, the amounts of insoluble organic matter are negligible compared with the amounts in solution and therefore do not affect the final results.

  18. Organic matters: investigating the sources, transport, and fate of organic matter in Fanno Creek, Oregon

    USGS Publications Warehouse

    Sobieszczyk, Steven; Keith, Mackenzie K.; Goldman, Jami H.; Rounds, Stewart A.

    2015-01-01

    The U.S. Geological Survey (USGS), in cooperation with Clean Water Services, recently completed an investigation into the sources, transport, and fate of organic matter in the Fanno Creek watershed. The information provided by this investigation will help resource managers to implement strategies aimed at decreasing the excess supply of organic matter that contributes to low dissolved-oxygen levels in Fanno Creek and downstream in the Tualatin River during summer. This fact sheet summarizes the findings of the investigation.

  19. A marine sink for chlorine in natural organic matter

    NASA Astrophysics Data System (ADS)

    Leri, Alessandra C.; Mayer, Lawrence M.; Thornton, Kathleen R.; Northrup, Paul A.; Dunigan, Marisa R.; Ness, Katherine J.; Gellis, Austin B.

    2015-08-01

    Chloride--the most abundant ion in sea water--affects ocean salinity, and thereby seawater density and ocean circulation. Its lack of reactivity gives it an extremely long residence time. Other halogens are known to be incorporated into marine organic matter. However, evidence of similar transformations of seawater chloride is lacking, aside from emissions of volatile organochlorine by marine algae. Here we report high organochlorine concentrations from 180 to 700 mg kg-1 in natural particulate organic matter that settled into sediment traps at depths between 800 and 3,200 m in the Arabian Sea, taken between 1994 and 1995. X-ray spectromicroscopic imaging of chlorine bonding reveals that this organochlorine exists primarily in concentrated aliphatic forms consistent with lipid chlorination, along with a more diffuse aromatic fraction. High aliphatic organochlorine in particulate material from cultured phytoplankton suggests that primary production is a source of chlorinated organic matter. We also found that particulate algal detritus can act as an organic substrate for abiotic reactions involving Fe2+, H2O2 or light that incorporate chlorine into organic matter at levels up to several grams per kilogram. We conclude that transformations of marine chloride to non-volatile organochlorine through biological and abiotic pathways represent an oceanic sink for this relatively unreactive element.

  20. How clustering dark energy affects matter perturbations

    NASA Astrophysics Data System (ADS)

    Mehrabi, A.; Basilakos, S.; Pace, F.

    2015-09-01

    The rate of structure formation in the Universe is different in homogeneous and clustered dark energy models. The degree of dark energy clustering depends on the magnitude of its effective sound speed c2_eff and for c2_eff=0 dark energy clusters in a similar fashion to dark matter while for c2_eff=1 it stays (approximately) homogeneous. In this paper we consider two distinct equations of state for the dark energy component, wd = const and w_d=w_0+w_1(z/1+z) with c2_eff as a free parameter and we try to constrain the dark energy effective sound speed using current available data including Type Ia supernovae, baryon acoustic oscillation, cosmic microwave background shift parameter (Planck and WMAP), Hubble parameter, big bang nucleosynthesis and the growth rate of structures fσ8(z). At first we derive the most general form of the equations governing dark matter and dark energy clustering under the assumption that c2_eff=const. Finally, performing an overall likelihood analysis we find that the likelihood function peaks at c2_eff=0; however, the dark energy sound speed is degenerate with respect to the cosmological parameters, namely Ωm and wd.

  1. Subaerial weathering of sedimentary organic matter

    USGS Publications Warehouse

    Clayton, J.L.; Swetland, P.J.

    1978-01-01

    Small diameter core samples were taken from outcrops of the Permian Phosphoria Formation and the Cretaceous Pierre Shale of the Western United States to determine the effects of weathering on organic matter in shale outcrops. While the Pierre Shale core showed no evidence of weathering, the Phosphoria Formation showed significant reduction of overall organic content and pronounced changes in organic composition over the near-surface interval of the core. Total organic carbon is lower by as much as 60% over the upper 2 ft of the core. Chloroform-soluble organic matter and total hydrocarbon (C15+) concentrations are 50% lower over this same interval. The ratio of saturated to aromatic hydrocarbons decreases steadily with core depth over the upper 2.6 ft of the core. Aromatic hydrocarbons are enriched in the stable carbon-13 isotope by an average of 1.7%. over this same interval. Shallow core samples also show a loss of n-paraffins relative to branched/cyclic compounds in the saturated C15+ fraction. Although the extent of weathering is variable, certain characteristic effects are recognizable and can be applied to the interpretation of outcrop data in organic geochemical studies. ?? 1978.

  2. Isotopic analysis of cometary organic matter

    NASA Astrophysics Data System (ADS)

    Kerridge, J. F.

    1991-04-01

    Carbon isotope ratios have been measured for CN in the coma of Comet Halley and for several CHON particles emitted by Halley. Of these, only the CHON-particle data may be reasonably related to organic matter in the cometary nucleus, but the true range of (C-13)/(C-12) values in those particles is quite uncertain. The D/H ratio in H2O in the Halley coma resembles that in Titan/Uranus.

  3. Peer reviewed: Characterizing aquatic dissolved organic matter

    USGS Publications Warehouse

    Leenheer, Jerry A.; Croué, Jean-Philippe

    2003-01-01

    Whether it causes aesthetic concerns such as color, taste, and odor; leads to the binding and transport of organic and inorganic contaminants; produces undesirable disinfection byproducts; provides sources and sinks for carbon; or mediates photochemical processes, the nature and properties of dissolved organic matter (DOM) in water are topics of significant environmental interest. DOM is also a major reactant in and product of biogeochemical processes in which the material serves as a carbon and energy source for biota and controls levels of dissolved oxygen, nitrogen, phosphorus, sulfur, numerous trace metals, and acidity.

  4. Isolation and chemical characterization of dissolved and colloidal organic matter

    USGS Publications Warehouse

    Aiken, G.; Leenheer, J.

    1993-01-01

    Commonly used techniques for the concentration and isolation of organic matter from water, such as preparative chromatography, ultrafiltration and reverse osmosis, and the methods used to analyze the organic matter obtained by these methods are reviewed. The development of methods to obtain organic matter that is associated with fractions of the dissolved organic carbon other than humic substances, such as organic bases, hydrophilic organic acids and colloidal organic matter are discussed. Methods specifically used to study dissolved organic nitrogen and dissolved organic phosphorous are also discussed. -from Authors

  5. Effects of augmentation of coarse particulate organic matter on metabolism and nutrient retention in hyporheic sediments

    Treesearch

    C.L. Crenshaw; H.M. Valett; J.R. Webster

    2002-01-01

    1. Metabolic and biogeochemical processes in hyporheic zones may depend on inputs of coarse particulate organic matter. Our research focused on how differing quantity and quality of organic matter affects metabolism and nutrient retention in the hyporheic zone of a first-order Appalachian stream. 2. Sixteen plots were established on a tributary of Hugh White Creek, NC...

  6. Effects of Agronomic and Conservation Management Practices On Organic Matter and Associated Properties in Claypan Soils

    USDA-ARS?s Scientific Manuscript database

    Organic matter plays several important roles in the biogeochemistry of soil and impacts the sustainability and profitability of agroecosystems. Retention and transformation of soil organic matter (SOM) are affected by agronomic and conservation management practices. The primary objective of this stu...

  7. The role of aquatic fungi in transformations of organic matter mediated by nutrients

    Treesearch

    Cynthia J. Tant; Amy D. Rosemond; Andrew S. Mehring; Kevin A. Kuehn; John M. Davis

    2015-01-01

    1. We assessed the key role of aquatic fungi in modifying coarse particulate organic matter (CPOM) by affecting its breakdown rate, nutrient concentration and conversion to fine particulate organic matter (FPOM). Overall, we hypothesised that fungal-mediated conditioning and breakdown of CPOM would be accelerated when nutrient concentrations are increased and tested...

  8. Organic Matter Decomposition following Harvesting and Site Preparation of a Forested Wetland

    Treesearch

    Carl C. Trettin; M. Davidian; M.F. Jurgensen; R. Lea

    1996-01-01

    Organic matter accumulation is an important process that affects ecosystem function in many northern wetlands. The cotton strip assay (CSA)was used to measure the effect of harvesting and two different site preparation treatments, bedding and trenching, on organic matter decomposition in a forested wetland. A Latin square experimental design was used to determine the...

  9. Abiotic Bromination of Soil Organic Matter.

    PubMed

    Leri, Alessandra C; Ravel, Bruce

    2015-11-17

    Biogeochemical transformations of plant-derived soil organic matter (SOM) involve complex abiotic and microbially mediated reactions. One such reaction is halogenation, which occurs naturally in the soil environment and has been associated with enzymatic activity of decomposer organisms. Building on a recent finding that naturally produced organobromine is ubiquitous in SOM, we hypothesized that inorganic bromide could be subject to abiotic oxidations resulting in bromination of SOM. Through lab-based degradation treatments of plant material and soil humus, we have shown that abiotic bromination of particulate organic matter occurs in the presence of a range of inorganic oxidants, including hydrogen peroxide and assorted forms of ferric iron, producing both aliphatic and aromatic forms of organobromine. Bromination of oak and pine litter is limited primarily by bromide concentration. Fresh plant material is more susceptible to bromination than decayed litter and soil humus, due to a labile pool of mainly aliphatic compounds that break down during early stages of SOM formation. As the first evidence of abiotic bromination of particulate SOM, this study identifies a mechanistic source of the natural organobromine in humic substances and the soil organic horizon. Formation of organobromine through oxidative treatments of plant material also provides insights into the relative stability of aromatic and aliphatic components of SOM.

  10. Abiotic Bromination of Soil Organic Matter

    SciTech Connect

    Leri, Alessandra C.; Ravel, Bruce

    2015-11-17

    Biogeochemical transformations of plant-derived soil organic matter (SOM) involve complex abiotic and microbially mediated reactions. One such reaction is halogenation, which occurs naturally in the soil environment and has been associated with enzymatic activity of decomposer organisms. Building on a recent finding that naturally produced organobromine is ubiquitous in SOM, we hypothesized that inorganic bromide could be subject to abiotic oxidations resulting in bromination of SOM. Through lab-based degradation treatments of plant material and soil humus, we have shown that abiotic bromination of particulate organic matter occurs in the presence of a range of inorganic oxidants, including hydrogen peroxide and assorted forms of ferric iron, producing both aliphatic and aromatic forms of organobromine. Bromination of oak and pine litter is limited primarily by bromide concentration. Fresh plant material is more susceptible to bromination than decayed litter and soil humus, due to a labile pool of mainly aliphatic compounds that break down during early stages of SOM formation. As the first evidence of abiotic bromination of particulate SOM, this study identifies a mechanistic source of the natural organobromine in humic substances and the soil organic horizon. Formation of organobromine through oxidative treatments of plant material also provides insights into the relative stability of aromatic and aliphatic components of SOM.

  11. The surface area of soil organic matter

    USGS Publications Warehouse

    Chiou, C.T.; Lee, J.-F.; Boyd, S.A.

    1990-01-01

    The previously reported surface area for soil organic matter (SOM) of 560-800 m2/g as determined by the ethylene glycol (EG) retention method was reexamined by the standard BET method based on nitrogen adsorption at liquid nitrogen temperature. Test samples consisted of two high organic content soils, a freeze-dried soil humic acid, and an oven-dried soil humic acid. The measured BET areas for these samples were less than 1 m2/g, except for the freeze-dried humic acid. The results suggest that surface adsorption of nonionic organic compounds by SOM is practically insignificant in comparison to uptake by partition. The discrepancy between the surface areas of SOM obtained by BET and EG methods was explained in terms of the 'free surface area' and the 'apparent surface area' associated with these measurements.The previously reported surface area for soil organic matter (SOM) of 560-800 m2/g as determined by the ethylene glycol (EG) retention method was reexamined by the standard BET method based on nitrogen adsorption at liquid nitrogen temperature. Test samples consisted of two high organic content soils, a freeze-dried soil humic acid, and an oven-dried soil humic acid. The measured BET areas for these samples were less than 1 m2/g, except for the freeze-dried humic acid. The results suggest that surface adsorption of nonionic organic compounds by SOM is practically insignificant in comparison to uptake by partition. The discrepancy between the surface areas of SOM obtained by BET and EG methods was explained in terms of the 'free surface area' and the 'apparent surface area' associated with these measurements.

  12. Nature of particulate organic matter in the River Indus, Pakistan

    NASA Astrophysics Data System (ADS)

    Ittekkot, Venugopalan; Arain, Rafee

    1986-08-01

    Suspended sediments from the Indus River collected during 1981 through 1983 were analyzed for POC and its constituent fractions including amino acids, amino sugars and sugars. Percentage of POC decreased with increasing suspended matter concentrations, which suggested dilution of organic matter by mineral matter. The concentrations of amino acids, amino sugars and sugars varied, respectively, between 180 and 2000 μg/l, 5 and 125 μg/l, and 60 and 1100 μg/l. Their contributions to POC varied between 2 and 60% for amino acids and amino sugars, and between 2 and 15% for sugars. They were high during low sediment discharge (February to June), and low during high sediment discharge (August and September). Suspended sediments associated with high sediment discharge periods were characterized by low ratios of: (i) aspartic acid:β-alanine (ii) glutamic acid:γ-aminobutyric acid (iii) amino acids:amino sugars (iv) hexoses:pentoses. These and the relative distribution pattern of the monosaccharides such as galactose, arabinose, mannose and xylose indicated that, not only dilution, but also differences in the sources and processes affect the POC transport in the Indus River. These result in transport of biodegraded organic matter during high sediment discharge periods: this appears to be common to other major rivers of the region, with depositional centers in deep sea areas. These rivers, with their high sediment loads, could contribute up to 8 to 11% of the global annual organic carbon burial in marine sediments.

  13. Microorganisms and typical organic matter responsible for lacustrine "black bloom".

    PubMed

    Feng, Ziyan; Fan, Chengxin; Huang, Weiyi; Ding, Shiming

    2014-02-01

    Identifying the causation of the black substance in lacustrine "black bloom" is of great significance for forecasting and preventing black bloom in many waters of the world. In this research, an array of black bloom was simulated in a laboratory to investigate how microorganisms and organic matter affect black bloom. Sulphate-reducing bacteria (SRB) are the main biological factor, and protein is the key organic factor contributing to lacustrine black bloom. The black colour of black bloom is strongly associated with a relatively high SRB population density. Hydrogen sulphide concentration can serve as a predictor of black bloom. © 2013.

  14. Organic geochemical analysis of sedimentary organic matter associated with uranium

    USGS Publications Warehouse

    Leventhal, J.S.; Daws, T.A.; Frye, J.S.

    1986-01-01

    Samples of sedimentary organic matter from several geologic environments and ages which are enriched in uranium (56 ppm to 12%) have been characterized. The three analytical techniqyes used to study the samples were Rock-Eval pyrolysis, pyrolysis-gas chromatography-mass spectrometry, and solid-state C-13 nuclear magnetic resonance (NMR) spectroscopy. In samples with low uranium content, the pyrolysis-gas chromatography products contain oxygenated functional groups (as hydroxyl) and molecules with both aliphatic and aromatic carbon atoms. These samples with low uranium content give measurable Rock-Eval hydrocarbon and organic-CO2 yields, and C-13 NMR values of > 30% aliphatic carbon. In contrast, uranium-rich samples have few hydrocarbon pyrolysis products, increased Rock-Eval organic-CO2 contents and > 70% aromatic carbon contents from C-13 NMR. The increase in aromaticity and decrease in hydrocarbon pyrolysis yield are related to the amount of uranium and the age of the uranium minerals, which correspond to the degree of radiation damage. The three analytical techniques give complementary results. Increase in Rock-Eval organic-CO2 yield correlates with uranium content for samples from the Grants uranium region. Calculations show that the amount of organic-CO2 corresponds to the quantity of uranium chemically reduced by the organic matter for the Grants uranium region samples. ?? 1986.

  15. Lability of secondary organic particulate matter

    PubMed Central

    Liu, Pengfei; Li, Yong Jie; Wang, Yan; Gilles, Mary K.; Zaveri, Rahul A.; Bertram, Allan K.

    2016-01-01

    The energy flows in Earth’s natural and modified climate systems are strongly influenced by the concentrations of atmospheric particulate matter (PM). For predictions of concentration, equilibrium partitioning of semivolatile organic compounds (SVOCs) between organic PM and the surrounding vapor has widely been assumed, yet recent observations show that organic PM can be semisolid or solid for some atmospheric conditions, possibly suggesting that SVOC uptake and release can be slow enough that equilibrium does not prevail on timescales relevant to atmospheric processes. Herein, in a series of laboratory experiments, the mass labilities of films of secondary organic material representative of similar atmospheric organic PM were directly determined by quartz crystal microbalance measurements of evaporation rates and vapor mass concentrations. There were strong differences between films representative of anthropogenic compared with biogenic sources. For films representing anthropogenic PM, evaporation rates and vapor mass concentrations increased above a threshold relative humidity (RH) between 20% and 30%, indicating rapid partitioning above a transition RH but not below. Below the threshold, the characteristic time for equilibration is estimated as up to 1 wk for a typically sized particle. In contrast, for films representing biogenic PM, no RH threshold was observed, suggesting equilibrium partitioning is rapidly obtained for all RHs. The effective diffusion rate Dorg for the biogenic case is at least 103 times greater than that of the anthropogenic case. These differences should be accounted for in the interpretation of laboratory data as well as in modeling of organic PM in Earth’s atmosphere. PMID:27791063

  16. Mapping Soil Organic Matter with Hyperspectral Imaging

    NASA Astrophysics Data System (ADS)

    Moni, Christophe; Burud, Ingunn; Flø, Andreas; Rasse, Daniel

    2014-05-01

    Soil organic matter (SOM) plays a central role for both food security and the global environment. Soil organic matter is the 'glue' that binds soil particles together, leading to positive effects on soil water and nutrient availability for plant growth and helping to counteract the effects of erosion, runoff, compaction and crusting. Hyperspectral measurements of samples of soil profiles have been conducted with the aim of mapping soil organic matter on a macroscopic scale (millimeters and centimeters). Two soil profiles have been selected from the same experimental site, one from a plot amended with biochar and another one from a control plot, with the specific objective to quantify and map the distribution of biochar in the amended profile. The soil profiles were of size (30 x 10 x 10) cm3 and were scanned with two pushbroomtype hyperspectral cameras, one which is sensitive in the visible wavelength region (400 - 1000 nm) and one in the near infrared region (1000 - 2500 nm). The images from the two detectors were merged together into one full dataset covering the whole wavelength region. Layers of 15 mm were removed from the 10 cm high sample such that a total of 7 hyperspectral images were obtained from the samples. Each layer was analyzed with multivariate statistical techniques in order to map the different components in the soil profile. Moreover, a 3-dimensional visalization of the components through the depth of the sample was also obtained by combining the hyperspectral images from all the layers. Mid-infrared spectroscopy of selected samples of the measured soil profiles was conducted in order to correlate the chemical constituents with the hyperspectral results. The results show that hyperspectral imaging is a fast, non-destructive technique, well suited to characterize soil profiles on a macroscopic scale and hence to map elements and different organic matter quality present in a complete pedon. As such, we were able to map and quantify biochar in our

  17. The fate of airborne polycyclic organic matter.

    PubMed Central

    Nielsen, T; Ramdahl, T; Bjørseth, A

    1983-01-01

    Biological tests have shown that a significant part of the mutagenicity of organic extracts of collected airborne particulate matter is not due to polycyclic aromatic hydrocarbons (PAH). It is possible that part of these unknown compounds are transformation products of PAH. This survey focuses on the reaction of PAH in the atmosphere with other copollutants, such as nitrogen oxides, sulfur oxides, ozone and free radicals and their reaction products. Photochemically induced reactions of PAH are also included. The reactivity of particle-associated PAH is discussed in relation to the chemical composition and the physical properties of the carrier. Recommendations for future work are given. PMID:6825615

  18. Organic Matter in the Outer Solar System

    NASA Technical Reports Server (NTRS)

    Cruiskshank, Dale P.; DeVincenzi, Donald L. (Technical Monitor)

    2000-01-01

    Many solid bodies in the outer Solar System are covered with ices of various compositions, including water, carbon dioxide, methane, nitrogen, and other molecules that are solid at the low temperatures that prevail there. These ices have all been detected by remote sensing observations made with telescopes on Earth, or more recently, spacecraft in orbit (notably Galileo at Jupiter). The data also reveal other solid materials that could be minerals or complex carbon-bearing organic molecules. A study in progress using large ground-based telescopes to acquire infrared spectroscopic data, and laboratory results on the optical properties of complex organic matter, seeks to identify the non-icy materials on several satellites of Saturn, Uranus, and Neptune. The work on the satellites of Saturn is in part preparatory to the Cassini spacecraft investigation of the Saturn system, which will begin in 2004 and extend for four years.

  19. THE ROLE OF NITROGEN IN CHROMOPHORIC AND FLUORESCENT DISSOLVED ORGANIC MATTER FORMATION

    EPA Science Inventory

    Microbial and photochemical processes affect chromophoric dissolved organic matter (CDOM) dynamics in the ocean. Some evidence suggests that dissolved nitrogen plays a role in CDOM formation, although this has received little systematic attention in marine ecosystems. Coastal sea...

  20. THE ROLE OF NITROGEN IN CHROMOPHORIC AND FLUORESCENT DISSOLVED ORGANIC MATTER FORMATION

    EPA Science Inventory

    Microbial and photochemical processes affect chromophoric dissolved organic matter (CDOM) dynamics in the ocean. Some evidence suggests that dissolved nitrogen plays a role in CDOM formation, although this has received little systematic attention in marine ecosystems. Coastal sea...

  1. An original data treatment for infrared spectra of organic matter, application to extracted soil organic matter

    NASA Astrophysics Data System (ADS)

    Gomes Rossin, Bruna; Redon, Roland; Raynaud, Michel; Nascimento, Nadia Regina; Mounier, Stéphane

    2017-04-01

    Infrared spectra of extracted organic matter are easy and rapid to do, but generally hard to interpreted over the presence or not of certain organic functions. Indeed, the organic matter is a complex mixture of molecules often having absorption overlapping and it is also difficult to have a well calibrated or normalised spectra due to the difficulty to have a well known solid content or homogeneity for a sample (Monakhova et al. 2015, Tadini et al. 2015, Bardy et al. 2008). In this work, the IRTF (InfraRed Fourier Transform) spectra were treated by an original algorithm developed to obtain the principal components of the IRTF spectra and their contributions for each sample. This bilinear decomposition used a PCA initialisation and the principal components were estimated from vectors calculated by PCA and linearly combined to provide non-negative signals minimizing a criterion based on cross-correlation. Hence, using this decomposition, it is possible to define IRTF signal of organic matter fractions like humic acid or fulvic acid depending on their origin like surface of depth of soil profiles. The method was used on a set of sample from Upper Negro River Basin (Amazon, Brazil) (Bueno,2009), where three soils sequences from surface to two meter depth containing 10 slices each. The sequences were sampled on a podzol well drain, a hydromorphic podzol and a cryptopodzol. From the IRTF data five representative component spectra were defined for all the extracted organic matter , and using other chemical composition information, a mechanism of organic matter fate is proposed to explain the observed results. Bardy, M., E. Fritsch, S. Derenne, T. Allard, N. R. do Nascimento, and G. T. Bueno. 2008. "Micromorphology and Spectroscopic Characteristics of Organic Matter in Waterlogged Podzols of the Upper Amazon Basin." Geoderma 145 (3-4): 222-30. Bueno, G.T. Appauvrissement et podzolisation des latérites du baissin du Rio Negro et gênese dês Podzols dans le haut bassin

  2. Dispersed and accumulated organic matter in fractures: Primary migration evidences

    SciTech Connect

    Lopez, L.; Pasquali, J. )

    1993-02-01

    Concentrated organic matter accumulated in fractures (organic rich fraction) and dispersed organic matter (total rock) of the source rocks of the Querecual and San Antonio formations of the Eastern Venezuelan basin were studied. The distribution of organic matter was studied in polished sections. Sample were analyzed for total organic carbon (Ct), total bitumen and the n-alkane fraction within the bitumen. Dispersed and concentrated organic matter were analyzed separately, and the pertinent differences were established. Concentrated organic matter, probably accumulated to due migration of dispersed organic matter into fractures, or low pressure zones is deficient in n-alkanes of low molecular weight. This fact is interpreted as the result of the migration process that allows the preferential movement of light components of low polarity. It seems that the products of kerogen maturation start their transformation to materials more like crude oils from their primary migration, stage that is to say, within the source rock.

  3. Stability of Ferrihydrite and Organic Matter in Ferrihydrite-Organic Matter Associations

    NASA Astrophysics Data System (ADS)

    Eusterhues, K.; Totsche, K. U.

    2015-12-01

    Iron oxides can bind particularly large amounts of organic matter (OM) and seem to be an important control on OM storage in many soils. To better understand the interactions between Fe oxides and OM, we produced ferrihydrite-OM associations by adsorption and coprecipitation in laboratory experiments. Because ferrihydrites are often formed in OM-rich solutions, we assume that coprecipitation is a common process in nature. In contrast to adsorption on pre-existing ferrihydrite surfaces, coprecipitation involves adsorption, occlusion (physical entrapment of OM), formation of Fe-OM complexes, and poisoning of ferrihydrite growth. The reactivity of coprecipitates may therefore differ from ferriydrites with adsorbed OM. Incubation experiments with an inoculum extracted from a Podzol forest-floor were carried out to quantify the mineralization of the adsorbed and coprecipitated organic matter. These experiments showed that the association with ferrihydrite stabilized the associated organic matter, but that differences in the degradability of adsorbed and coprecipitated organic matter were small. We therefore conclude that coprecipitation does not lead to a significant formation of microbial inaccessible organic matter domains. Microbial reduction experiments were performed using Geobacter bremensis. We observed that increasing amounts of associated OM led to decreasing initial reaction rates and a decreasing degree of dissolution. Reduction of coprecipitated ferrihydrites was faster than reduction of ferrihydrites with adsorbed OM. Our data demonstrate that the association with ferrihydrite can effectively stabilize labile polysaccharides. Vice versa, these polysaccharides may protect ferrihydrite from reduction by Geobacter-like bacteria. However, a challenge for future studies will be to link formation and degradation of mineral-organic associations to natural porous systems, that is, to the complex interplay of mass transport and microbial distribution in the

  4. Spectral fingerprinting of soil organic matter composition

    NASA Astrophysics Data System (ADS)

    Cecillon, L.; Certini, G.; Lange, H.; Forte, C.; Strand, L. T.

    2009-04-01

    The determination of soil organic matter (SOM) composition relies on a variety of chemical and physical methods, most of them time consuming and expensive. Hitherto, such methodological limitations have hampered the use of detailed SOM composition in process-based models of SOM dynamics, which usually include only three poorly defined carbon pools. Here we show a novel approach merging both near and mid infrared spectroscopy into a single fingerprint for an expeditious prediction of the molecular composition of organic materials in soil, as inferred from a molecular mixing model (MMM) based on 13C nuclear magnetic resonance (NMR), which describes SOM as a mixture of common biologically derived polymers. Infrared and solid-state 13C NMR spectroscopic measurements were performed on a set of mineral and organic soil samples presenting a wide range of organic carbon content (2 to 500 g kg-1), collected in a boreal heathland (Storgama, Norway). The implementation of the MMM using 13C NMR spectra allowed the calculation of five main biochemical components (carbohydrate, protein, lignin, lipids and black carbon) for each sample. Partial least squares regression models were developed for the five biopolymers using outer product analysis of near and mid infrared spectra (Infrared-OPA). All models reached ratios of performance to deviation (RPD) above 2 and specific infrared wavenumbers associated to each biochemical component were identified. Our results demonstrate that Infrared-OPA provides a robust and cost-effective fingerprint of SOM composition that could be useful for the routine assessment of soil carbon pools.

  5. Organic matter oxidation and aragonite diagenesis in a coral reef

    SciTech Connect

    Tribble, G.W. Univ. of Hawaii, Honolulu )

    1993-05-01

    A combination of field and theoretical work is used to study controls on the saturation state of aragonite inside a coral-reef framework. A closed-system ion-speciation model is used to evaluate the effect of organic-matter oxidation on the saturation state of aragonite. The aragonite saturation state initially drops below 1 but becomes oversaturated during sulfate reduction. The C:N ratio of the organic matter affects the degree of oversaturation with N-poor organic material resulting in a system more corrosive to aragonite. Precipitation of sulfide as FeS strongly affects the aragonite saturation state, and systems with much FeS formation will have a stronger tendency to become oversaturated with respect to aragonite. Both precipitation and dissolution of aragonite are predicted at different stages of the organic reaction pathway if the model system is maintained at aragonite saturation. Field data from a coral-reef framework indicate that the system maintains itself at aragonite saturation, and model-predicted changes in dissolved calcium follow those observed in the interstitial waters of the reef. Aragonite probably acts as a solid-phase buffer in regulating the pH of interstitial waters. Because interstitial water in the reef has a short residence time, the observed equilibration suggests rapid kinetics.

  6. Relating dissolved organic matter fluorescence to functional properties

    NASA Astrophysics Data System (ADS)

    Tipping, E.; Baker, A.; Thacker, S.; Gondar, D.

    2007-12-01

    The fluorescence excitation emission matrix properties of dissolved organic matter from three rivers and one lake in NW England are analysed. Sites are sampled in duplicate and for some sites seasonally to cover variations in dissolved organic matter composition, river flow, and carbon isotopic (13C, 14C) variability. Results are compared to the functional properties of the dissolved organic matter, the functional assays provide quantitative information on light absorption, fluorescence, photochemical fading, pH buffering, copper binding, benzo[a]pyrene binding, hydrophilicity and adsorption to alumina. Fluorescence characterization of the dissolved organic matter samples demonstrates that peak C fluorescence emission wavelength, the ratio of peak T to peak C fluorescence intensity, and the fluorescence : absorbance ratio best differentiate different dissolved organic matter samples. These parameters correspond to dissolved organic matter aromaticity, the ratio of labile to recalcitrant organic matter, and dissolved organic matter molecular weight. Peak C fluorescence emission wavelength, the ratio of peak T to peak C fluorescence intensity, and the fluorescence : absorbance ratio fluorescence parameters also have strong correlations with several of the functional assays, in particular the extinction coefficients, benzo(a)pyrene binding and alumina adsorption, and buffering capacity. In many cases, regression equations with a correlation coefficient >0.9 are obtained, suggesting that dissolved organic matter functional character can be predicted from DOM fluorescence properties. For one site, the relationship between dissolved organic matter source, fluorescence, function and carbon isotopic composition is discussed.

  7. Lability of secondary organic particulate matter

    SciTech Connect

    Liu, Pengfei; Li, Yong Jie; Wang, Yan; Gilles, Mary K.; Zaveri, Rahul A.; Bertram, Allan K.; Martin, Scot T.

    2016-10-24

    We report the energy flows in Earth’s natural and modified climate systems are strongly influenced by the concentrations of atmospheric particulate matter (PM). For predictions of concentration, equilibrium partitioning of semivolatile organic compounds (SVOCs) between organic PM and the surrounding vapor has widely been assumed, yet recent observations show that organic PM can be semisolid or solid for some atmospheric conditions, possibly suggesting that SVOC uptake and release can be slow enough that equilibrium does not prevail on timescales relevant to atmospheric processes. Herein, in a series of laboratory experiments, the mass labilities of films of secondary organic material representative of similar atmospheric organic PM were directly determined by quartz crystal microbalance measurements of evaporation rates and vapor mass concentrations. There were strong differences between films representative of anthropogenic compared with biogenic sources. For films representing anthropogenic PM, evaporation rates and vapor mass concentrations increased above a threshold relative humidity (RH) between 20% and 30%, indicating rapid partitioning above a transition RH but not below. Below the threshold, the characteristic time for equilibration is estimated as up to 1 wk for a typically sized particle. In contrast, for films representing biogenic PM, no RH threshold was observed, suggesting equilibrium partitioning is rapidly obtained for all RHs. The effective diffusion rate Dorg for the biogenic case is at least 103 times greater than that of the anthropogenic case. In conclusion, these differences should be accounted for in the interpretation of laboratory data as well as in modeling of organic PM in Earth’s atmosphere.

  8. Lability of secondary organic particulate matter

    DOE PAGES

    Liu, Pengfei; Li, Yong Jie; Wang, Yan; ...

    2016-10-24

    We report the energy flows in Earth’s natural and modified climate systems are strongly influenced by the concentrations of atmospheric particulate matter (PM). For predictions of concentration, equilibrium partitioning of semivolatile organic compounds (SVOCs) between organic PM and the surrounding vapor has widely been assumed, yet recent observations show that organic PM can be semisolid or solid for some atmospheric conditions, possibly suggesting that SVOC uptake and release can be slow enough that equilibrium does not prevail on timescales relevant to atmospheric processes. Herein, in a series of laboratory experiments, the mass labilities of films of secondary organic material representativemore » of similar atmospheric organic PM were directly determined by quartz crystal microbalance measurements of evaporation rates and vapor mass concentrations. There were strong differences between films representative of anthropogenic compared with biogenic sources. For films representing anthropogenic PM, evaporation rates and vapor mass concentrations increased above a threshold relative humidity (RH) between 20% and 30%, indicating rapid partitioning above a transition RH but not below. Below the threshold, the characteristic time for equilibration is estimated as up to 1 wk for a typically sized particle. In contrast, for films representing biogenic PM, no RH threshold was observed, suggesting equilibrium partitioning is rapidly obtained for all RHs. The effective diffusion rate Dorg for the biogenic case is at least 103 times greater than that of the anthropogenic case. In conclusion, these differences should be accounted for in the interpretation of laboratory data as well as in modeling of organic PM in Earth’s atmosphere.« less

  9. Methylmercury production in estuarine sediments: role of organic matter

    PubMed Central

    Schartup, Amina T.; Mason, Robert P.; Balcom, Prentiss H.; Hollweg, Terill A.; Chen, Celia Y.

    2013-01-01

    Methylmercury (MeHg) affects wildlife and human health mainly through marine fish consumption. In marine systems, MeHg is formed from inorganic mercury (HgII) species primarily in sediments then accumulates and biomagnifies in the food web. Most of the fish consumed in the US are from estuarine and marine systems highlighting the importance of understanding MeHg formation in these productive regions. Sediment organic matter has been shown to limit mercury methylation in estuarine ecosystems, as a result it is often described as the primary control over MeHg production. In this paper, we explore the role of organic matter by looking at the effects of its changing sediment concentrations on the methylation rates across multiple estuaries. We measured sedimentary MeHg production at eleven estuarine sites that were selected for their contrasting biogeochemical characteristics, mercury (Hg) content, and location in the Northeastern US (ME, NH, CT, NY, and NJ). Sedimentary total Hg concentrations ranged across five orders of magnitude, increasing in concentration from the pristine, sandy sediments of Wells (ME), to industrially contaminated areas like Portsmouth (NH) and Hackensack (NJ). We find that methylation rates are the highest at locations with high Hg content (relative to carbon), and that organic matter does not hinder mercury methylation in estuaries. PMID:23194318

  10. Starting life requires more than organic matter

    NASA Astrophysics Data System (ADS)

    Pascal, R.

    2015-10-01

    A physicochemical approach is proposed to study requirements for the origin of life in agreement with developments made in Systems Chemistry for several decades. Emphasis is made on the occurrence of environments generating abiotic chemical systems making more of themselves under far from equilibrium conditions. It follows that the presence of organic matter is only one of the components needed for the process of chemical evolution leading to life. The presence of an energy source with a potential equivalent to that of visible light is needed to render the activation step kinetically irreversible and the reproduction loop a unidirectional flux of reactants. This condition is required in order that reproduction follows an exponential law and dynamic kinetic stability governs the evolution toward the selection of improved variants. According to these views, no fundamental difference can be found between the chemical and biological stages of evolution.

  11. The composition and degradability of upland dissolved organic matter

    NASA Astrophysics Data System (ADS)

    Moody, Catherine; Worrall, Fred; Clay, Gareth

    2016-04-01

    In order to assess controls on the degradability of DOM in stream water, samples of dissolved organic matter (DOM) and particulate organic matter (POM) were collected every month for a period of 24 months from an upland, peat-covered catchment in northern England. Each month the degradability of the DOM was assessed by exposing river water to light for up to 24 hours, and the change in the dissolved organic carbon (DOC) concentration in the water was measured. To provide context for the analysis of DOM and its degradability, samples of peat, vegetation, and litter were also taken from the same catchment and analysed. The organic matter samples were analysed by several methods including: elemental analysis (CHN and O), bomb calorimetry, thermogravimetric analysis, pyrolysis GC/MS, ICP-OES, stable isotope analysis (13C and 15N) and 13C solid state nuclear magnetic resonance (NMR). The water samples were analysed for pH, conductivity, absorbance at 400nm, anions, cations, particulate organic carbon (POC) and DOC concentrations. River flow conditions and meteorology were also recorded at the site and included in the analysis of the composition and degradability of DOM. The results of multiple regression models showed that the rates of DOC degradation were affected by the N-alkyl, O-alkyl, aldehyde and aromatic relative intensities, gross heat, OR and C:N. Of these, the N-alkyl relative intensity had the greatest influence, and this in turn was found to be dependent on the rainfall and soil temperature in the week before sampling.

  12. Variation of preserving organic matter bound in interlayer of montmorillonite induced by microbial metabolic process.

    PubMed

    Zhao, Yulian; Dong, Faqin; Dai, Qunwei; Li, Gang; Ma, Jie

    2017-07-25

    This paper aimed to investigate the variation of preserving organic matter bound in the interlayer space of montmorillonite (Mt) induced by a microbe metabolic process. We selected Bacillus pumilus as the common soil native bacteria. The alteration of d 001 value, functional group, and C,N organic matter contents caused by bacteria were analyzed by XRD, FTIR, and elementary analyzer, respectively. XRD results showed that the d 001 value of montmorillonite increased with the concentration decreasing and decreased with the culture time increasing after interacting with bacteria indicating the interlayer space of montmorillonite was connected with the organic matter. The findings of long-term interaction by resetting culture conditions implied that the montmorillonite buffered the organic matter when the nutrition was enough and released again when the nutrition was lacking. The results of the elementary analyzer declared the content of organic matter was according to the d 001 value of montmorillonite and N organic matter which played a major impact. FTIR results confirmed that the Si-O stretching vibrations of Mt were affected by the functional group of organic matter. Our results showed that the montmorillonite under the influence of soil bacteria has a strong buffering capacity for preserving organic matter into the interlayer space in a short-term. It might provide critical implications for understanding the evolution process and the preservation of fertilization which was in the over-fertilization or less-fertilization conditions on farmland.

  13. Soil Organic Matter and Management of Plant-Parasitic Nematodes

    PubMed Central

    Widmer, T. L.; Mitkowski, N. A.; Abawi, G. S.

    2002-01-01

    Organic matter and its replenishment has become a major component of soil health management programs. Many of the soil's physical, chemical, and biological properties are a function of organic matter content and quality. Adding organic matter to soil influences diverse and important biological activities. The diversity and number of free-living and plant-parasitic nematodes are altered by rotational crops, cover crops, green manures, and other sources of organic matter. Soil management programs should include the use of the proper organic materials to improve soil chemical, physical, and biological parameters and to suppress plant-parasitic nematodes and soilborne pathogens. It is critical to monitor the effects of organic matter additions on activities of major and minor plant-parasitic nematodes in the production system. This paper presents a general review of information in the literature on the effects of crop rotation, cover crops, and green manures on nematodes and their damage to economic crops. PMID:19265946

  14. Seasonal changes in photochemical properties of dissolved organic matter

    NASA Astrophysics Data System (ADS)

    Porcal, P.; Dillon, P. J.; Molot, L. A.

    2013-03-01

    The fate of dissolved organic matter (DOM) in lakes and streams is significantly affected by photochemical transformation of DOM. A series of laboratory photochemical experiments was conducted to describe long-term changes in photochemical properties of DOM. The stream samples used in this study originated from three different catchments on the southern-most part of the Boreal ecozone near Dorset, Ontario, Canada. A first-order kinetics equation was used to model photochemical degradation of DOM and the kinetic rate constant, K, was used as an indicator of photochemical properties of DOM. Highest Kwas observed in samples from the catchment dominated by coniferous forest while the lowest K was measured in the deciduous catchment. Kinetic rate constants from all three catchments showed a sinusoidal pattern during the hydrological year. K increased steadily during autumn and winter and decreased during spring and summer. The highest values were observed during spring melt events when DOM was flushed from terrestrial sources by high flows. The minimum rate constants were found in summer when discharge was lowest. DOM molecular weight and specific absorbance at 254 nm also exhibited annual cycles corresponding to the seasonal cycles of terrestrial organic matter but the relationships between these properties and K was probably affected by previous exposure to solar radiation during transit from the catchment as well as pH and iron.

  15. Biotoxicity of nanoparticles: effect of natural organic matter

    NASA Astrophysics Data System (ADS)

    Lee, Sungyun; Kim, Kitae; Shon, H. K.; Kim, Sang Don; Cho, Jaeweon

    2011-07-01

    Various natural organic matters (NOM) with different characteristics in aquatic environment may affect toxicity of leased nanoparticles, owing to interactions between NOM and nanoparticles. This study investigated the effect of NOM and physical characteristics of the effluent organic matter (EfOM) on the ecotoxicity of quantum dots (QD) using Daphnia magna. Organic matter samples were obtained from: Yeongsan River (YR-NOM), Dongbuk Lake (DL-NOM), Damyang wastewater treatment plant (EfOM), and Suwannee River NOM (SR-NOM). The QD was composed of a CdSe core, ZnS shell, and polyethylene glycol coating. The average size of the investigated QD was 4.8, 56.5, and 25.0 nm determined by transmission electron microscopy, dynamic light scattering, and asymmetric flow field-flow fractionation, respectively. The relative hydrophobicity of NOM was investigated using both specific UV absorbance at 254 nm and XAD-8/4 resins. The sorption of NOM on the QD was measured using a fluorescence quenching method. The highest hydrophobicity was exhibited by the SR-NOM, while the lowest was recorded for the DL-NOM. All tested NOMs significantly reduced the acute toxicity of D. magna when adsorbed to QD, and the order of effectiveness for each NOM was as follows: SR-NOM > EfOM > YS-NOM > DL-NOM. The sorption of NOM on the QD surface caused a decrease in the fluorescence intensity of QD at increasing NOM concentration. This suggests that the NOM coating influenced the physicochemical characteristics of QD in the internal organs of D. magna by inducing a reduced bioavailability . Results from this study revealed that NOM with relatively high hydrophobicity had a greater capability of inducing toxicity mitigation.

  16. Sensitivity of soil organic matter in anthropogenically disturbed organic soils

    NASA Astrophysics Data System (ADS)

    Säurich, Annelie; Tiemeyer, Bärbel; Bechtold, Michel; Don, Axel; Freibauer, Annette

    2016-04-01

    Drained peatlands are hotspots of carbon dioxide (CO2) emissions from agriculture. However, the variability of CO2 emissions increases with disturbance, and little is known on the soil properties causing differences between seemingly similar sites. Furthermore the driving factors for carbon cycling are well studied for both genuine peat and mineral soil, but there is a lack of information concerning soils at the boundary between organic and mineral soils. Examples for such soils are both soils naturally relatively high in soil organic matter (SOM) such as Humic Gleysols and former peat soils with a relative low SOM content due to intensive mineralization or mixing with underlying or applied mineral soil. The study aims to identify drivers for the sensitivity of soil organic matter and therefore for respiration rates of anthropogenically disturbed organic soils, especially those near the boundary to mineral soils. Furthermore, we would like to answer the question whether there are any critical thresholds of soil organic carbon (SOC) concentrations beyond which the carbon-specific respiration rates change. The German agricultural soil inventory samples all agricultural soils in Germany in an 8x8 km² grid following standardized protocols. From this data and sample base, we selected 120 different soil samples from more than 80 sites. As reference sites, three anthropogenically undisturbed peatlands were sampled as well. We chose samples from the soil inventory a) 72 g kg-1 SOC and b) representing the whole range of basic soil properties: SOC (72 to 568 g kg-1), total nitrogen (2 to 29 g kg-1), C-N-ratio (10 to 80) bulk density (0.06 to 1.41 g/cm³), pH (2.5 to 7.4), sand (0 to 95 %) and clay (2 to 70 %) content (only determined for samples with less than 190 g kg-1 SOC) as well as the botanical origin of the peat (if determinable). Additionally, iron oxides were determined for all samples. All samples were sieved (2 mm) and incubated at standardized water content and

  17. Aerobic methane production from organic matter

    NASA Astrophysics Data System (ADS)

    Vigano, I.

    2010-01-01

    Methane, together with H2O, CO2 and N2O, is an important greenhouse gas in th e Earth’s atmosphere playing a key role in the radiative budget. It has be en known for decades that the production of the reduced compound CH4 is possible almost exclusively in anoxic environments per opera of one of the most importan t class of microorganisms which form the Archaea reign. Methane can be produced also from incomplete combustion of organic material. The generation of CH4 in an oxygenated environment under near-ambient conditions is a new discovery made in 2006 by Keppler et. al where surprisingly they measured emissions of this green house gas from plants incubated in chambers with air containing 20% of oxygen. A lthough the estimates on a global scale are still object of an intensive debate, the results presented in this thesis clearly show the existence of methane prod uction under oxic conditions for non living plant material. Temperature and UV l ight are key factors that drive the generation of CH4 from plant matter in a wel l oxygenated environment.

  18. The evolution of organic matter in space.

    PubMed

    Ehrenfreund, Pascale; Spaans, Marco; Holm, Nils G

    2011-02-13

    Carbon, and molecules made from it, have already been observed in the early Universe. During cosmic time, many galaxies undergo intense periods of star formation, during which heavy elements like carbon, oxygen, nitrogen, silicon and iron are produced. Also, many complex molecules, from carbon monoxide to polycyclic aromatic hydrocarbons, are detected in these systems, like they are for our own Galaxy. Interstellar molecular clouds and circumstellar envelopes are factories of complex molecular synthesis. A surprisingly high number of molecules that are used in contemporary biochemistry on the Earth are found in the interstellar medium, planetary atmospheres and surfaces, comets, asteroids and meteorites and interplanetary dust particles. Large quantities of extra-terrestrial material were delivered via comets and asteroids to young planetary surfaces during the heavy bombardment phase. Monitoring the formation and evolution of organic matter in space is crucial in order to determine the prebiotic reservoirs available to the early Earth. It is equally important to reveal abiotic routes to prebiotic molecules in the Earth environments. Materials from both carbon sources (extra-terrestrial and endogenous) may have contributed to biochemical pathways on the Earth leading to life's origin. The research avenues discussed also guide us to extend our knowledge to other habitable worlds.

  19. Mapping forest soil organic matter on New Jersey's coastal plain

    Treesearch

    Brian J. Clough; Edwin J. Green; Richard B. Lathrop

    2012-01-01

    Managing forest soil organic matter (SOM) stocks is a vital strategy for reducing the impact of anthropogenic carbon dioxide emissions. However, the SOM pool is highly variable, and developing accurate estimates to guide management decisions has remained a difficult task. We present the results of a spatial model designed to map soil organic matter for all forested...

  20. Organic matter interactions with natural manganese oxide and synthetic birnessite.

    PubMed

    Allard, Sébastien; Gutierrez, Leonardo; Fontaine, Claude; Croué, Jean-Philippe; Gallard, Hervé

    2017-04-01

    Redox reactions of inorganic and organic contaminants on manganese oxides have been widely studied. However, these reactions are strongly affected by the presence of natural organic matter (NOM) at the surface of the manganese oxide. Interestingly, the mechanism behind NOM adsorption onto manganese oxides remains unclear. Therefore, in this study, the adsorption kinetics and equilibrium of different NOM isolates to synthetic manganese oxide (birnessite) and natural manganese oxide (Mn sand) were investigated. Natural manganese oxide is composed of both amorphous and well-crystallised Mn phases (i.e., lithiophorite, birnessite, and cryptomelane). NOM adsorption on both manganese oxides increased with decreasing pH (from pH7 to 5), in agreement with surface complexation and ligand exchange mechanisms. The presence of calcium enhanced the rate of NOM adsorption by decreasing the electrostatic repulsion between NOM and Mn sand. Also, the adsorption was limited by the diffusion of NOM macromolecules through the Mn sand pores. At equilibrium, a preferential adsorption of high molecular weight molecules enriched in aromatic moieties was observed for both the synthetic and natural manganese oxide. Hydrophobic interactions may explain the adsorption of organic matter on manganese oxides. The formation of low molecular weight UV absorbing molecules was detected with the synthetic birnessite, suggesting oxidation and reduction processes occurring during NOM adsorption. This study provides a deep insight for both environmental and engineered systems to better understand the impact of NOM adsorption on the biogeochemical cycle of manganese.

  1. Estimating toxic damage to soil ecosystems from soil organic matter profiles

    USGS Publications Warehouse

    Beyer, W.N.

    2001-01-01

    Concentrations of particulate and total organic matter were measured in upper soil profiles at 26 sites as a potential means to identify toxic damage to soil ecosystems. Because soil organic matter plays a role in cycling nutrients, aerating soil, retaining water, and maintaining tilth, a significant reduction in organic matter content in a soil profile is not just evidence of a change in ecosystem function, but of damage to that soil ecosystem. Reference sites were selected for comparison to contaminated sites, and additional sites were selected to illustrate how variables other than environmental contaminants might affect the Soil organic matter profile. The survey was undertaken on the supposition that environmental contaminants and other stressors reduce the activity of earthworms and other macrofauna, inhibiting the incorporation of organic matter into the soil profile. The profiles of the unstressed soils showed a continuous decrease in organic matter content from the uppermost mineral soil layer (0-2.5 cm) down to 15 cm. Stressed soils showed an abrupt decrease in soil organic matter content below a depth of 2.5 cm. The 2.5-5.0 cm layer of stressed soils--such as found in a pine barren, an orchard, sites contaminated with zinc, and a site with compacted soil--had less than 4% total organic matter and less than 1% particulate organic matter. However, damaged soil ecosystems were best identified by comparison of their profiles to the profiles of closely matched reference soils, rather than by comparison to these absolute values. The presence or absence of earthworms offered a partial explanation of observed differences in soil organic matter profiles.

  2. Subcritical water extraction of organic matter from sedimentary rocks.

    PubMed

    Luong, Duy; Sephton, Mark A; Watson, Jonathan S

    2015-06-16

    Subcritical water extraction of organic matter containing sedimentary rocks at 300°C and 1500 psi produces extracts comparable to conventional solvent extraction. Subcritical water extraction of previously solvent extracted samples confirms that high molecular weight organic matter (kerogen) degradation is not occurring and that only low molecular weight organic matter (free compounds) are being accessed in analogy to solvent extraction procedures. The sedimentary rocks chosen for extraction span the classic geochemical organic matter types. A type I organic matter-containing sedimentary rock produces n-alkanes and isoprenoidal hydrocarbons at 300°C and 1500 psi that indicate an algal source for the organic matter. Extraction of a rock containing type II organic matter at the same temperature and pressure produces aliphatic hydrocarbons but also aromatic compounds reflecting the increased contributions from terrestrial organic matter in this sample. A type III organic matter-containing sample produces a range of non-polar and polar compounds including polycyclic aromatic hydrocarbons and oxygenated aromatic compounds at 300°C and 1500 psi reflecting a dominantly terrestrial origin for the organic materials. Although extraction at 300°C and 1500 psi produces extracts that are comparable to solvent extraction, lower temperature steps display differences related to organic solubility. The type I organic matter produces no products below 300°C and 1500 psi, reflecting its dominantly aliphatic character, while type II and type III organic matter contribute some polar components to the lower temperature steps, reflecting the chemical heterogeneity of their organic inventory. The separation of polar and non-polar organic compounds by using different temperatures provides the potential for selective extraction that may obviate the need for subsequent preparative chromatography steps. Our results indicate that subcritical water extraction can act as a suitable

  3. Dissolved Organic Matter and Emerging Contaminants in Urban Stream Ecosystems

    NASA Astrophysics Data System (ADS)

    Kaushal, S. S.; Findlay, S.; Groffman, P.; Belt, K.; Delaney, K.; Sides, A.; Walbridge, M.; Mayer, P.

    2009-05-01

    We investigated the effects of urbanization on the sources, bioavailability and forms of natural and anthropogenic organic matter found in streams located in Maryland, U.S.A. We found that the abundance, biaoavailability, and enzymatic breakdown of dissolved organic carbon (DOC), dissolved organic nitrogen (DON), and dissolved organic phosphorus (DOP) increased in streams with increasing watershed urbanization suggesting that organic nutrients may represent a growing form of nutrient loading to coastal waters associated with land use change. Organic carbon, nitrogen, and phosphorus in urban streams were elevated several-fold compared to forest and agricultural streams. Enzymatic activities of stream microbes in organic matter decomposition were also significantly altered across watershed land use. Chemical characterization suggested that organic matter in urban streams originated from a variety of sources including terrestrial, sewage, and in-stream transformation. In addition, a characterization of emerging organic contaminants (polyaromatic cyclic hydrocarbons, organochlorine pesticides, and polybrominated diphenyl ether flame retardents), showed that organic contaminants and dissolved organic matter increase with watershed urbanization and fluctuate substantially with changing climatic conditions. Elucidating the emerging influence of urbanization on sources, transport, and in-stream transformation of organic nutrients and contaminants will be critical in unraveling the changing role of organic matter in urban degraded and restored stream ecosystems.

  4. CHARACTERIZING THE ORGANIC MATTER IN SURFACE ...

    EPA Pesticide Factsheets

    The San Juan Bay Estuary (SJBE) is located on the north coast of Puerto Rico and includes the San Juan Bay, San José Lagoon, La Torrecilla Lagoon and Piñones Lagoon, as well as the Martín Peña and the Suárez Canals. The SJBE watershed has the highest density of inhabitants and major industrial activities in Puerto Rico. As a result, the SJBE is impacted by wastewater from combined-sewer overflows, faulty sewer lines, and storm water runoff; these factors combined with trash accumulation and infilling of the Martín Peña canal, contribute to decreased tidal exchange and reduced flushing in the estuary. To quantify the impact of the obstruction of the Martín Peña canal on anthropogenic nutrient distribution in the SJBE, over 200 sediment grab samples were collected throughout the estuary in 2015. The samples were analyzed for carbonate content, organic matter, grain size, bulk density, percent phosphorus, percent nitrogen (%N), and stable isotopes (δ15N and δ13C). The %N values were highest in the surface sediments from the western portion of the Martín Peña canal, where %N was >0.86%. In contrast, %N from the adjacent San José lagoon averaged <0.2%. Grain size distributions across the SJBE were consistent with low flushing in the inner portions of the SJBE. While the Martín Peña canal remains phosphorus limited, N:P ratios suggest the San Juna Bay and San José Lagoon have undergone major ecological shifts in the past two decades. Our

  5. CHARACTERIZING THE ORGANIC MATTER IN SURFACE ...

    EPA Pesticide Factsheets

    The San Juan Bay Estuary (SJBE) is located on the north coast of Puerto Rico and includes the San Juan Bay, San José Lagoon, La Torrecilla Lagoon and Piñones Lagoon, as well as the Martín Peña and the Suárez Canals. The SJBE watershed has the highest density of inhabitants and major industrial activities in Puerto Rico. As a result, the SJBE is impacted by wastewater from combined-sewer overflows, faulty sewer lines, and storm water runoff; these factors combined with trash accumulation and infilling of the Martín Peña canal, contribute to decreased tidal exchange and reduced flushing in the estuary. To quantify the impact of the obstruction of the Martín Peña canal on anthropogenic nutrient distribution in the SJBE, over 200 sediment grab samples were collected throughout the estuary in 2015. The samples were analyzed for carbonate content, organic matter, grain size, bulk density, percent phosphorus, percent nitrogen (%N), and stable isotopes (δ15N and δ13C). The %N values were highest in the surface sediments from the western portion of the Martín Peña canal, where %N was >0.86%. In contrast, %N from the adjacent San José lagoon averaged <0.2%. Grain size distributions across the SJBE were consistent with low flushing in the inner portions of the SJBE. While the Martín Peña canal remains phosphorus limited, N:P ratios suggest the San Juna Bay and San José Lagoon have undergone major ecological shifts in the past two decades. Our

  6. Changes in River Organic Matter Through Time.

    NASA Astrophysics Data System (ADS)

    Hudson, N.; Baker, A.; Ward, D.

    2006-12-01

    fluorescence, as an increase in pH was also observed in these samples. This work illustrates the dynamic character of river organic matter within a timescale and under conditions that are representative of the natural system.

  7. Effects of dissolved organic matter on toxicity and bioavailability of copper for lettuce sprouts.

    PubMed

    Inaba, Shoko; Takenaka, Chisato

    2005-05-01

    It is well known that dissolved organic matter in soil solution may affect the toxicity or bioavailability of heavy metals to plants, but existing information on various organic substances is insufficient for treating problems with heavy metal-contaminated soils. To clarify how dissolved organic matter alters the toxicity and bioavailability of metals, we germinated lettuce seeds exposed to solutions containing Cu and several kinds of dissolved organic matters. Low molecular weight organic acids (citric, malic, and oxalic acids) increased the toxicity and bioavailability of Cu, but low concentrations of the synthetic chelators ethylenediamine tetra-acetic acid (EDTA) and diethylenetriamine penta-acetic acid (DTPA) decreased the toxicity and bioavailability of Cu. In contrast, humic acid appeared to be the most effective organic substance for detoxifying Cu, even though it did not significantly decrease the bioavailability of Cu. Consequently, the bioavailability and toxic effects of Cu in soil depend on the nature of coexisting organic substances in the soil solution.

  8. Reduction of ferrihydrite with adsorbed and coprecipitated organic matter: microbial reduction by Geobacter bremensis vs. abiotic reduction by Na-dithionite

    NASA Astrophysics Data System (ADS)

    Eusterhues, K.; Hädrich, A.; Neidhardt, J.; Küsel, K.; Keller, T. F.; Jandt, K. D.; Totsche, K. U.

    2014-09-01

    Ferrihydrite is a widespread poorly crystalline Fe oxide which becomes easily coated by natural organic matter in the environment. This mineral-bound organic matter entirely changes the mineral surface properties and therefore the reactivity of the original mineral. Here, we investigated 2-line ferrihydrite, ferrihydrite with adsorbed organic matter, and ferrihydrite coprecipitated with organic matter for microbial and abiotic reduction of Fe(III). Ferrihydrite-organic matter associations with different organic matter loadings were reduced either by Geobacter bremensis or abiotically by Na-dithionite. Both types of experiments showed decreasing initial Fe-reduction rates and decreasing degrees of reduction with increasing amounts of mineral-bound organic matter. At similar organic matter loadings, coprecipitated ferrihydrites were more reactive than ferrihydrites with adsorbed organic matter. The difference can be explained by the smaller crystal size and poor crystallinity of such coprecipitates. At small organic matter loadings the poor crystallinity of coprecipitates led to even faster Fe-reduction rates than found for pure ferrihydrite. The amount of mineral-bound organic matter also affected the formation of secondary minerals: goethite was only found after reduction of organic matter-free ferrihydrite and siderite was only detected when ferrihydrites with relatively low amounts of mineral-bound organic matter were reduced. We conclude that direct contact of G. bremensis to the Fe oxide mineral surface was inhibited by attached organic matter. Consequently, mineral-bound organic matter shall be taken into account as a factor in slowing down reductive dissolution.

  9. Photochemical Reactivity of Dissolved Organic Matter in Boreal Lakes

    NASA Astrophysics Data System (ADS)

    Gu, Y.; Vuorio, K.; Tiirola, M.; Perämäki, S.; Vahatalo, A.

    2016-12-01

    Boreal lakes are rich in dissolved organic matter (DOM) that terrestrially derived from forest soil and wetland, yet little is known about potential for photochemical transformation of aquatic DOM in boreal lakes. Transformation of chromophoric dissolved organic matter (CDOM) can decrease water color and enhance microbial mineralization, affecting primary production and respiration, which both affect the CO2 balance of the lakes. We used laboratory solar radiation exposure experiments with lake water samples collected from 54 lakes located in Finland and Sweden, representing different catchment composition and watershed location to assess photochemical reactivity of DOM. The pH of water samples ranged from 5.4 to 8.3, and the concentrations of dissolved iron (Fe) were between < 0.06 and 22 μmol L-1. The filtered water samples received simulated solar radiation corresponding to a daily dose of sunlight, and photomineralization of dissolved organic carbon (DOC) to dissolved inorganic carbon (DIC) was measured for determination of spectral apparent quantum yields (AQY). During irradiation, photobleaching decreased the absorption coefficients of CDOM at 330 nm between 4.9 and 79 m-1 by 0.5 to 11 m-1. Irradiation generated DIC from 2.8 to 79 μmol C L-1. The AQY at 330 nm ranged between 31 and 273 ×10-6 mol C mol photons-1 h-1, which was correlated positively with concentration of dissolved Fe, and negatively with pH. Further statistical analyze indicated that the interaction between pH and Fe may explain much of the photochemical reactivity of DOM in the examined lakes, and land cover concerns main catchment areas also can have impact on the photoreaction process. This study may suggest how environmental conditions regulate DOM photomineralization in boreal lakes.

  10. Terrestrial and marine perspectives on modeling organic matter degradation pathways.

    PubMed

    Burd, Adrian B; Frey, Serita; Cabre, Anna; Ito, Takamitsu; Levine, Naomi M; Lønborg, Christian; Long, Matthew; Mauritz, Marguerite; Thomas, R Quinn; Stephens, Brandon M; Vanwalleghem, Tom; Zeng, Ning

    2016-01-01

    Organic matter (OM) plays a major role in both terrestrial and oceanic biogeochemical cycles. The amount of carbon stored in these systems is far greater than that of carbon dioxide (CO2 ) in the atmosphere, and annual fluxes of CO2 from these pools to the atmosphere exceed those from fossil fuel combustion. Understanding the processes that determine the fate of detrital material is important for predicting the effects that climate change will have on feedbacks to the global carbon cycle. However, Earth System Models (ESMs) typically utilize very simple formulations of processes affecting the mineralization and storage of detrital OM. Recent changes in our view of the nature of this material and the factors controlling its transformation have yet to find their way into models. In this review, we highlight the current understanding of the role and cycling of detrital OM in terrestrial and marine systems and examine how this pool of material is represented in ESMs. We include a discussion of the different mineralization pathways available as organic matter moves from soils, through inland waters to coastal systems and ultimately into open ocean environments. We argue that there is strong commonality between aspects of OM transformation in both terrestrial and marine systems and that our respective scientific communities would benefit from closer collaboration.

  11. Deformation behaviors of peat with influence of organic matter.

    PubMed

    Yang, Min; Liu, Kan

    2016-01-01

    Peat is a kind of special material rich in organic matter. Because of the high content of organic matter, it shows different deformation behaviors from conventional geotechnical materials. Peat grain has a non-negligible compressibility due to the presence of organic matter. Biogas can generate from peat and can be trapped in form of gas bubbles. Considering the natural properties of peat, a special three-phase composition of peat is described which indicates the existence of organic matter and gas bubbles in peat. A stress-strain-time model is proposed for the compression of organic matter, and the surface tension effect is considered in the compression model of gas bubbles. Finally, a mathematical model has been developed to simulate the deformation behavior of peat considering the compressibility of organic matter and entrapped gas bubbles. The deformation process is the coupling of volume variation of organic matter, gas bubbles and water drainage. The proposed model is used to simulate a series of peat laboratory oedometer tests, and the model can well capture the test results with reasonable model parameters. Effects of model parameters on deformation of peat are also analyzed.

  12. Spatial Complexity of Soil Organic Matter Forms at Nanometre Scales

    SciTech Connect

    Lehmann,J.; Solomon, D.; Kinyangi, J.; Dathe, L.; Wirick, S.; Jacobsen, C.

    2008-01-01

    Organic matter in soil has been suggested to be composed of a complex mixture of identifiable biopolymers1 rather than a chemically complex humic material2. Despite the importance of the spatial arrangement of organic matter forms in soil3, its characterization has been hampered by the lack of a method for analysis at fine scales. X-ray spectromicroscopy has enabled the identification of spatial variability of organic matter forms, but was limited to extracted soil particles4 and individual micropores within aggregates5, 6. Here, we use synchrotron-based near-edge X-ray spectromicroscopy7 of thin sections of entire and intact free microaggregates6 to demonstrate that on spatial scales below 50 nm resolution, highly variable yet identifiable organic matter forms, such as plant or microbial biopolymers, can be found in soils at distinct locations of the mineral assemblage. Organic carbon forms detected at this spatial scale had no similarity to organic carbon forms of total soil. In contrast, we find that organic carbon forms of total soil were remarkably similar between soils from several temperate and tropical forests with very distinct vegetation composition and soil mineralogy. Spatial information on soil organic matter forms at the scale provided here could help to identify processes of organic matter cycling in soil, such as carbon stability or sequestration and responses to a changing climate.

  13. Sediment organic matter content as a confounding factor in toxicity tests with Chironomus tentans

    SciTech Connect

    Lacey, R.; Watzin, M.C.; McIntosh, A.W.

    1999-02-01

    Physicochemical characteristics of sediment unrelated to contaminant levels and bioavailability may influence the outcome of toxicity tests. In particular, sediment organic matter content has the potential to be a confounding factor in toxicity tests using the midge larva Chironomus tentans because the larvae are infaunal and feed on organic matter in the sediments. To examine the possibility, the authors conducted a series of tests using formulated sediments with varying organic matter contents following the standard US Environmental Protection Agency (US EPA) 10-day C. tentans growth and survival protocol. Formulated sediments made with peat moss, {alpha}-cellulose, and maple leaves were tested. An organic-rich natural sediment diluted with formulated sediment to achieve a range of organic matter contents was also examined. In a final experiment, sediments containing each of the four organic matter sources at the same concentration were tested against one another. Survival was not greatly affected by concentration of organic matter, except at the lowest concentrations in natural sediment, where survival dipped below 70%. In experiments using peat moss, {alpha}-cellulose, and maple leaves, significant differences in C. tentans growth were found at different organic matter concentrations. In contrast, concentration of organic matter in the natural sediment dilution series had little effect on growth, perhaps because much of this material was highly refractory. In the comparison experiment, growth differed significantly among the four sediments, with best growth achieved with {alpha}-cellulose and leaves. These results suggest that both organic matter quantity and quality can be confounding factors in toxicity tests using C. tentans.

  14. Association of organic matter and ferrihydrite: adsorption versus coprecipitation

    NASA Astrophysics Data System (ADS)

    Eusterhues, K.; Rennert, T.; Knicker, H.; Totsche, K. U.

    2009-04-01

    Ferrihydrite (Fh) - even if present at low concentrations - may control the available surface area and therefore, the behaviour of nutrients and pollutants in soils. Its precipitation often takes place in the presence of dissolved organic matter (OM). This involves processes such as adsorption, but also coprecipitation, flocculation/coagulation and poisoning of crystal growth. In this study, we compare coprecipitation of organic matter and ferrihydrite with pure adsorption of OM on ferrihydrite. We therefore prepared an adsorption series and a coprecipitation series using (i) water extractable organic matter from a forest topsoil and (ii) sulfite extractable lignin from paper. Products were investigated by N2-adsorption, XRD and FTIR. In coprecipitation experiments with both types of OM we observed a strong interference of the organic molecules with crystal growth leading to smaller Fh crystals, increased lattice spacings and a lower crystallinity. The highest achieved C loadings were found at approximately 200 mg C per g Fh for the adsorption and coprecipitation of the soil extract as well as for the adsorption of lignin. Coprecipitation of lignin, in contrast, resulted in a much higher maximum loading of 360 mg C per g Fh. The FTIR spectrum of the unreacted soil extract is mainly characterized by carboxyl C and polysaccharide C, with a smaller contribution of phenolic C. Spectra of the adsorbed or coprecipitated soil extract reveal weaker bands and lowered wave numbers indicating removal from solution followed by the formation of chemical bonds between the organic species and Fh by inner-sphere surface complexes. The FTIR spectrum of the lignin material shows a strong contribution of carboxyl C, polysaccharide C, and several aromatic C species. Again, all of these C species seem to form surface complexes after reaction with Fh in adsorption and coprecipitation experiments. Interestingly, at low initial C concentrations in all experiments the sorption of carboxyl

  15. Conservative or reactive? Mechanistic chemical perspectives on organic matter stability

    NASA Astrophysics Data System (ADS)

    Koch, Boris

    2016-04-01

    Carbon fixation by terrestrial and marine primary production has a fundamental seasonal effect on the atmospheric carbon content and it profoundly contributes to long-term carbon storage in form of organic matter (OM) in soils, water, and sediments. The efficacy of this sequestration process strongly depends on the degree of OM persistence. Therefore, one of the key issues in dissolved and particulate OM research is to assess the stability of reservoirs and to quantify their contribution to global carbon fluxes. Incubation experiments are helpful to assess OM stability during the first, early diagenetic turnover induced by sunlight or microbes. However, net carbon fluxes within the global carbon cycle also act on much longer time scales, which are not amenable in experiments. It is therefore critical to improve our mechanistic understanding to be able to assess potential future changes in the organic matter cycle. This session contribution highlights some achievements and open questions in the field. An improved mechanistic understanding of OM turnover particularly depends on the molecular characterization of biogeochemical processes and their kinetics: (i) in soils and sediments, aggregation/disaggregation of OM is primarily controlled by its molecular composition. Hence, the chemical composition determines the transfer of organic carbon from the large particulate to the small dissolved organic matter reservoir - an important substrate for microbial metabolism. (ii) In estuaries, dissolved organic carbon gradients usually suggest conservative behavior, whereas molecular-level studies reveal a substantial chemical modification of terrestrial DOM along the land-ocean interface. (iii) In the ocean, previous studies have shown that the recalcitrance of OM depends on bulk concentration and energy yield. However, ultrahigh resolution mass spectrometry in combination with radiocarbon analyses also emphasized that stability is tightly connected to molecular composition

  16. Affective Symptoms and White Matter Changes in Brain Tumor Patients.

    PubMed

    Richter, Andre; Woernle, Cristoph M; Krayenbühl, Niklaus; Kollias, Spyridon; Bellut, David

    2015-10-01

    Affective symptoms are frequent in patients with brain tumors. The origin of such symptoms is unknown; either focal brain injury or reactive emotional distress may be responsible. This cross-sectional pilot study linked depressive symptoms and anxiety to white matter integrity. The objective was to test the hypothesis of a relationship between tissue damage and brain function in patients with brain tumors and to provide a basis for further studies in this field. Diffusion tensor imaging was performed in 39 patients with newly diagnosed supratentorial primary brain tumor. Patients completed the Beck Depression Inventory, and examiners rated them on the Hamilton Depression Rating Scale (HDRS). State and trait anxiety were measured using the State-Trait Anxiety Inventory. Correlations between fractional anisotropy (FA) and psychological measures were assessed on the basis of regions of interest; the defined regions of interest corresponded to clearly specified white matter tracts. Statistical analysis revealed correlations between FA in the left internal capsule and scores on the HDRS, Beck Depression Inventory, and State-Trait Anxiety Inventory (P < 0.05). HDRS scores were also correlated with FA in the right medial uncinate fasciculus, and state anxiety scores were significantly correlated with FA in the left lateral and medial uncinate fasciculus (P < 0.05). Our results suggest that neurobiologic mechanisms related to the integrity of tissue in specific white matter tracts may influence affective symptoms in patients with brain tumors, and these mechanisms can be investigated with diffusion tensor imaging. However, prospective observational studies are needed to investigate further the links between brain structures and the severity of affective symptoms in this patient population. Copyright © 2015 Elsevier Inc. All rights reserved.

  17. Organic matter in hydrothermal metal ores and hydrothermal fluids

    USGS Publications Warehouse

    Orem, W.H.; Spiker, E. C.; Kotra, R.K.

    1990-01-01

    Massive polymetallic sulfides are currently being deposited around active submarine hydrothermal vents associated with spreading centers. Chemoautolithotrophic bacteria are responsible for the high production of organic matter also associated with modern submarine hydrothermal activity. Thus, there is a significant potential for organic matter/metal interactions in these systems. We have studied modern and ancient hydrothermal metal ores and modern hydrothermal fluids in order to establish the amounts and origin of the organic matter associated with the metal ores. Twenty-six samples from modern and ancient hydrothermal systems were surveyed for their total organic C contents. Organic C values ranged from 0.01% to nearly 4.0% in these samples. Metal ores from modern and ancient sediment-covered hydrothermal systems had higher organic C values than those from modern and ancient hydrothermal systems lacking appreciable sedimentary cover. One massive pyrite sample from the Galapagos spreading center (3% organic C) had stable isotope values of -27.4% (??13C) and 2.1% (??15N), similar to those in benthic siphonophors from active vents and distinct from seep sea sedimentary organic matter. This result coupled with other analyses (e.g. 13C NMR, pyrolysis/GC, SEM) of this and other samples suggests that much of the organic matter may originate from chemoautolithotrophic bacteria at the vents. However, the organic matter in hydrothermal metal ores from sediment covered vents probably arises from complex sedimentary organic matter by hydrothermal pyrolysis. The dissolved organic C concentrations of hydrothermal fluids from one site (Juan de Fuca Ridge) were found to be the same as that of background seawater. This result may indicate that dissolved organic C is effectively scavenged from hydrothermal fluids by biological activity or by co-precipitation with metal ores. ?? 1990.

  18. Interstellar chemistry recorded in organic matter from primitive meteorites.

    PubMed

    Busemann, Henner; Young, Andrea F; Alexander, Conel M O'd; Hoppe, Peter; Mukhopadhyay, Sujoy; Nittler, Larry R

    2006-05-05

    Organic matter in extraterrestrial materials has isotopic anomalies in hydrogen and nitrogen that suggest an origin in the presolar molecular cloud or perhaps in the protoplanetary disk. Interplanetary dust particles are generally regarded as the most primitive solar system matter available, in part because until recently they exhibited the most extreme isotope anomalies. However, we show that hydrogen and nitrogen isotopic compositions in carbonaceous chondrite organic matter reach and even exceed those found in interplanetary dust particles. Hence, both meteorites (originating from the asteroid belt) and interplanetary dust particles (possibly from comets) preserve primitive organics that were a component of the original building blocks of the solar system.

  19. Factors affecting membership in specialty nursing organizations.

    PubMed

    White, Mary Joe; Olson, Rhonda S

    2004-01-01

    A discouraging trend in many specialty nursing organizations is the stagnant or declining membership. The research committee of the Southeast Texas Chapter of the Association of Rehabilitation Nurses (ARN) collected data and studied this trend to determine what changes would be necessary to increase membership. Using Herzberg's motivational theory as a framework, a review of the literature was initiated. There were few current studies on this issue, but relevant information was found about nursing's emerging workforce, as well as implications of the growth of magnet hospitals, which affect whether nurses join specialty nursing organizations. A multifaceted data-collection approach using convenience samples was designed. First, relevant literature was reviewed. Second, a survey was sent by e-mail to other ARN chapters. Third, a telephone survey on other specialty organizations in the geographic region was completed. Finally, members of the local ARN chapter and four other specialty organizations, as well staff nurses in the geographic area, were given questionnaires to complete. Descriptive statistics and cross tabulations were used to determine why nurses do and do not join specialty organizations (N = 81). The most frequent reasons for joining an organization were to increase knowledge, benefit professionally, network, and earn continuing education units. Reasons for choosing not to participate were family responsibilities, lack of information about these organizations, and lack of time. Ways to reverse the decline in membership are discussed.

  20. Effect of organic matter on CO(2) hydrate phase equilibrium in phyllosilicate suspensions.

    PubMed

    Park, Taehyung; Kyung, Daeseung; Lee, Woojin

    2014-06-17

    In this study, we examined various CO2 hydrate phase equilibria under diverse, heterogeneous conditions, to provide basic knowledge for successful ocean CO2 sequestration in offshore marine sediments. We investigated the effect of geochemical factors on CO2 hydrate phase equilibrium. The three-phase (liquid-hydrate-vapor) equilibrium of CO2 hydrate in the presence of (i) organic matter (glycine, glucose, and urea), (ii) phyllosilicates [illite, kaolinite, and Na-montmorillonite (Na-MMT)], and (iii) mixtures of them was measured in the ranges of 274.5-277.0 K and 14-22 bar. Organic matter inhibited the phase equilibrium of CO2 hydrate by association with water molecules. The inhibition effect decreased in the order: urea < glycine < glucose. Illite and kaolinite (unexpandable clays) barely affected the CO2 hydrate phase equilibrium, while Na-MMT (expandable clay) affected the phase equilibrium because of its interlayer cations. The CO2 hydrate equilibrium conditions, in the illite and kaolinite suspensions with organic matter, were very similar to those in the aqueous organic matter solutions. However, the equilibrium condition in the Na-MMT suspension with organic matter changed because of reduction of its inhibition effect by intercalated organic matter associated with cations in the Na-MMT interlayer.

  1. Pyrogenic organic matter can alter microbial communication

    NASA Astrophysics Data System (ADS)

    Masiello, Caroline; Gao, Xiaodong; Cheng, Hsiao-Ying; Silberg, Jonathan

    2016-04-01

    Soil microbes communicate with each other to manage a large range of processes that occur more efficiently when microbes are able to act simultaneously. This coordination occurs through the continuous production of signaling compounds that are easily diffused into and out of cells. As the number of microbes in a localized environment increases, the internal cellular concentration of these signaling compounds increases, and when a threshold concentration is reached, gene expression shifts, leading to altered (and coordinated) microbial behaviors. Many of these coordinated behaviors have biogeochemically important outcomes. For example, methanogenesis, denitrification, biofilm formation, and the development of plant-rhizobial symbioses are all regulated by a simple class of cell-cell signaling molecules known as acyl homoserine lactones (AHLs). Pyrogenic organic matter in soils can act to disrupt microbial communication through multiple pathways. In the case of AHLs, charcoal's very high surface area can sorb these signaling compounds, preventing microbes from detecting each others' presence (Masiello et al., 2014). In addition, the lactone ring in AHLs is vulnerable to pH increases accompanying PyOM inputs, with soil pH values higher than 7-8 leading to ring opening and compound destabilization. Different microbes use different classes of signaling compounds, and not all microbial signaling compounds are pH-vulnerable. This implies that PyOM-driven pH increases may trigger differential outcomes for Gram negative bacteria vs fungi, for example. A charcoal-driven reduction in microbes' ability to detect cell-cell communication compounds may lead to a shift in the ability of microbes to participate in key steps of C and N cycling. For example, an increase in an archaeon-specific AHL has been shown to lead to a cascade of metabolic processes that eventually results in the upregulation of CH4 production (Zhang et al., 2012). Alterations in similar AHL compounds leads to

  2. Organic matter diagenesis in shallow water carbonate sediments

    NASA Astrophysics Data System (ADS)

    Ingalls, Anitra E.; Aller, Robert C.; Lee, Cindy; Wakeham, Stuart G.

    2004-11-01

    Muddy carbonate deposits near the Dry Tortugas, Florida, are characterized by high organic carbon remineralization rates. However, approximately half of the total sedimentary organic matter potentially supporting remineralization is occluded in CaCO 3 minerals (intracrystalline). While a portion of nonintracrystalline organic matter appears to cycle rapidly, intracrystalline organic matter has an approximately constant concentration with depth, suggesting that as long as its protective mineral matrix is intact, it is not readily remineralized. Organic matter in excess of intracrystalline organic matter that is preserved may have a variety of mineral associations (e.g., intercrystalline, adsorbed or detrital). In surface sediment, aspartic acid contributed ˜22 mole % and ˜50 mole % to nonintracrystalline and intracrystalline pools, respectively. In deeper sediment (1.6-1.7m), the composition of hydrolyzable amino acids in both pools was similar (aspartic acid ˜40 mole %). Like amino acids, intracrystalline and nonintracrystalline fatty acids have different compositions in surface sediments, but are indistinguishable at depth. These data suggest that preserved organic matter in the nonintracrystalline pool is stabilized by its interactions with CaCO 3. Neutral lipids are present in very low abundances in the intracrystalline pool and are extensively degraded in both the intracrystalline and nonintracrystalline pools, suggesting that mineral interactions do not protect these compounds from degradation. The presence of chlorophyll- a, but absence of phytol, in the intracrystalline lipid pool demonstrates that chloropigments are present only in the nonintracrystalline pool. Sedimentary chloropigments decrease with depth at similar rates in Dry Tortugas sediments as found in alumino-silicate sediments from the Long Island Sound, suggesting that chloropigment degradation is largely unaffected by mineral interactions. Overall, however, inclusion and protection of

  3. Assessment of soil organic matter fluxes at the EU level

    NASA Astrophysics Data System (ADS)

    Gobin, Anne; Campling, Paul

    2010-05-01

    Soil has a complex relationship with climate change. Soil helps take carbon dioxide out of the air and as such it absorbs millions of tons each year, but with the Earth still warming micro-organisms grow faster, consume more soil organic matter and release carbon dioxide. The net result is a relative decline in soil organic carbon. With a growing population and higher bio-energy demands, more land is likely to be required for settlement, for commercial activity and for bio-energy production. Conversions from terrestrial ecosystems to urban and commercial activity will alter both the production and losses of organic matter, and have an indirect impact on potential SOM levels. Conversions between different terrestrial ecosystems have a direct impact on SOM levels. Net SOM losses are reported for several land conversions, e.g. from grassland to arable land, from wetlands to drained agricultural land, from crop rotations to monoculture, reforestation of agricultural land. In the context of looking for measures to support best practices to manage soil organic matter in Europe we propose a method to assess soil organic matter fluxes at the EU level. We adopt a parsimonious approach that is comparable to the nutrient balance approaches developed by the OECD and Eurostat. We describe the methodology and present the initial results of a European carbon balance indicator that uses existing European statistical and land use change databases. The carbon balance consists of the following components: organic matter production (I), organic matter losses (O), land use changes that effect both production and losses (E). These components are set against the (mostly legislative) boundary conditions that determine the maximum input potential (MIP) for soil organic matter. In order to budget SOM losses due to mineralisation, runs will be made with a multi-compartment SOM model that takes into account management practices, climate and different sources of organic matter.

  4. Organic matter chlorination rates in different boreal soils: the role of soil organic matter content.

    PubMed

    Gustavsson, Malin; Karlsson, Susanne; Oberg, Gunilla; Sandén, Per; Svensson, Teresia; Valinia, Salar; Thiry, Yves; Bastviken, David

    2012-02-07

    Transformation of chloride (Cl(-)) to organic chlorine (Cl(org)) occurs naturally in soil but it is poorly understood how and why transformation rates vary among environments. There are still few measurements of chlorination rates in soils, even though formation of Cl(org) has been known for two decades. In the present study, we compare organic matter (OM) chlorination rates, measured by (36)Cl tracer experiments, in soils from eleven different locations (coniferous forest soils, pasture soils and agricultural soils) and discuss how various environmental factors effect chlorination. Chlorination rates were highest in the forest soils and strong correlations were seen with environmental variables such as soil OM content and Cl(-) concentration. Data presented support the hypothesis that OM levels give the framework for the soil chlorine cycling and that chlorination in more organic soils over time leads to a larger Cl(org) pool and in turn to a high internal supply of Cl(-) upon dechlorination. This provides unexpected indications that pore water Cl(-) levels may be controlled by supply from dechlorination processes and can explain why soil Cl(-) locally can be more closely related to soil OM content and the amount organically bound chlorine than to Cl(-) deposition.

  5. CARBON LOSS AND OPTICAL PROPERTY CHANGES DURING LONG-TERM PHOTOCHEMICAL AND BIOLOGICAL DEGRADATION OF ESTUARINE DISSOLVED ORGANIC MATTER

    EPA Science Inventory

    Terrestrially derived dissolved organic matter (DOM) impacts the optical properties of coastal seawater and affects carbon cycling on a global scale. We studied sequential long-term photochemical and biological degradation of estuarine dissolved organic matter from the
    Satilla...

  6. CARBON LOSS AND OPTICAL PROPERTY CHANGES DURING LONG-TERM PHOTOCHEMICAL AND BIOLOGICAL DEGRADATION OF ESTUARINE DISSOLVED ORGANIC MATTER

    EPA Science Inventory

    Terrestrially derived dissolved organic matter (DOM) impacts the optical properties of coastal seawater and affects carbon cycling on a global scale. We studied sequential long-term photochemical and biological degradation of estuarine dissolved organic matter from the
    Satilla...

  7. Modeling of natural organic matter transport processes in groundwater.

    PubMed Central

    Yeh, T C; Mas-Pla, J; McCarthy, J F; Williams, T M

    1995-01-01

    A forced-gradient tracer test was conducted at the Georgetown site to study the transport of natural organic matter (NOM) in groundwater. In particular, the goal of this experiment was to investigate the interactions between NOM and the aquifer matrix. A detailed three-dimensional characterization of the hydrologic conductivity heterogeneity of the site was obtained using slug tests. The transport of a conservative tracer (chloride) was successfully reproduced using these conductivity data. Despite the good simulation of the flow field, NOM breakthrough curves could not be reproduced using a two-site sorption model with spatially constant parameters. Preliminary results suggest that different mechanisms for the adsorption/desorption processes, as well as their spatial variability, may significantly affect the transport and fate of NOM. PMID:7621798

  8. Dissolved organic matter uptake by Trichodesmium in the Southwest Pacific

    PubMed Central

    Benavides, Mar; Berthelot, Hugo; Duhamel, Solange; Raimbault, Patrick; Bonnet, Sophie

    2017-01-01

    The globally distributed diazotroph Trichodesmium contributes importantly to nitrogen inputs in the oligotrophic oceans. Sites of dissolved organic matter (DOM) accumulation could promote the mixotrophic nutrition of Trichodesmium when inorganic nutrients are scarce. Nano-scale secondary ion mass spectrometry (nanoSIMS) analyses of individual trichomes sampled in the South Pacific Ocean, showed significant 13C-enrichments after incubation with either 13C-labeled carbohydrates or amino acids. These results suggest that DOM could be directly taken up by Trichodesmium or primarily consumed by heterotrophic epibiont bacteria that ultimately transfer reduced DOM compounds to their host trichomes. Although the addition of carbohydrates or amino acids did not significantly affect bulk N2 fixation rates, N2 fixation was enhanced by amino acids in individual colonies of Trichodesmium. We discuss the ecological advantages of DOM use by Trichodesmium as an alternative to autotrophic nutrition in oligotrophic open ocean waters. PMID:28117432

  9. Dissolved organic matter uptake by Trichodesmium in the Southwest Pacific

    NASA Astrophysics Data System (ADS)

    Benavides, Mar; Berthelot, Hugo; Duhamel, Solange; Raimbault, Patrick; Bonnet, Sophie

    2017-01-01

    The globally distributed diazotroph Trichodesmium contributes importantly to nitrogen inputs in the oligotrophic oceans. Sites of dissolved organic matter (DOM) accumulation could promote the mixotrophic nutrition of Trichodesmium when inorganic nutrients are scarce. Nano-scale secondary ion mass spectrometry (nanoSIMS) analyses of individual trichomes sampled in the South Pacific Ocean, showed significant 13C-enrichments after incubation with either 13C-labeled carbohydrates or amino acids. These results suggest that DOM could be directly taken up by Trichodesmium or primarily consumed by heterotrophic epibiont bacteria that ultimately transfer reduced DOM compounds to their host trichomes. Although the addition of carbohydrates or amino acids did not significantly affect bulk N2 fixation rates, N2 fixation was enhanced by amino acids in individual colonies of Trichodesmium. We discuss the ecological advantages of DOM use by Trichodesmium as an alternative to autotrophic nutrition in oligotrophic open ocean waters.

  10. Investigation of the organic matter in inactive nuclear tank liquids

    SciTech Connect

    Schenley, R.L.; Griest, W.H.

    1990-08-01

    Environmental Protection Agency (EPA) methodology for regulatory organics fails to account for the organic matter that is suggested by total organic carbon (TOC) analysis in the Oak Ridge National Laboratory (ORNL) inactive nuclear waste-tank liquids and sludges. Identification and measurement of the total organics are needed to select appropriate waste treatment technologies. An initial investigation was made of the nature of the organics in several waste-tank liquids. This report details the analysis of ORNL wastes.

  11. Effects of warming on stream biofilm organic matter use capabilities.

    PubMed

    Ylla, Irene; Canhoto, Cristina; Romaní, Anna M

    2014-07-01

    The understanding of ecosystem responses to changing environmental conditions is becoming increasingly relevant in the context of global warming. Microbial biofilm communities in streams play a key role in organic matter cycling which might be modulated by shifts in flowing water temperature. In this study, we performed an experiment at the Candal stream (Portugal) longitudinally divided into two reaches: a control half and an experimental half where water temperature was 3 °C above that of the basal stream water. Biofilm colonization was monitored during 42 days in the two stream halves. Changes in biofilm function (extracellular enzyme activities and carbon substrate utilization profiles) as well as chlorophyll a and prokaryote densities were analyzed. The biofilm in the experimental half showed a higher capacity to decompose cellulose, hemicellulose, lignin, and peptidic compounds. Total leucine-aminopeptidase, cellobiohydrolase and β-xylosidase showed a respective 93, 66, and 61% increase in activity over the control; much higher than would be predicted by only the direct temperature physical effect. In contrast, phosphatase and lipase activity showed the lowest sensitivity to temperature. The biofilms from the experimental half also showed a distinct functional fingerprint and higher carbon usage diversity and richness, especially due to a wider use of polymers and carbohydrates. The changes in the biofilm functional capabilities might be indirectly affected by the higher prokaryote and chlorophyll density measured in the biofilm of the experimental half. The present study provides evidence that a realistic stream temperature increase by 3 °C changes the biofilm metabolism to a greater decomposition of polymeric complex compounds and peptides but lower decomposition of lipids. This might affect stream organic matter cycling and the transfer of carbon to higher trophic levels.

  12. Characterizing Variability In Ohio River Natural Organic Matter

    EPA Science Inventory

    Surface water contains natural organic matter (NOM) which reacts with disinfectants creating disinfection byproducts (DBPs), some of which are USEPA regulated contaminants. Characterizing NOM can provide important insight on DBP formation and water treatment process adaptation t...

  13. Characterizing Variability In Ohio River Natural Organic Matter

    EPA Science Inventory

    Surface water contains natural organic matter (NOM) which reacts with disinfectants creating disinfection byproducts (DBPs), some of which are USEPA regulated contaminants. Characterizing NOM can provide important insight on DBP formation and water treatment process adaptation t...

  14. Do organic ligands affect calcite dissolution rates?

    NASA Astrophysics Data System (ADS)

    Oelkers, Eric H.; Golubev, Sergey V.; Pokrovsky, Oleg S.; Bénézeth, Pascale

    2011-04-01

    Steady state Iceland-spar calcite dissolution rates were measured at 25 °C in aqueous solutions containing 0.1 M NaCl and up to 0.05 M dissolved bicarbonate at pH from 7.9 to 9.1 in the presence of 13 distinct dissolved organic ligands in mixed-flow reactors. The organic ligands considered in this study include those most likely to be present in either (1) aquifers at the conditions pertinent to CO 2 sequestration or (2) soil/early diagenetic environments: acetate, phthalate, citrate, EDTA 4-, succinate, D-glucosaminate, L-glutamate, D-gluconate, 2,4-dihydroxybenzoate, 3,4-dihydroxybenzoate, fumarate, malonate, and gallate. Results show that the presence of <0.05 mol/kg of these organic anions changes calcite dissolution rates by less than a factor of 2.5 with the exception of citrate and EDTA 4-. The presence of 0.05 mol/kg citrate and EDTA 4- increases calcite dissolution rates by as much as a factor of 35 and 500, respectively, compared to rates in organic anion-free solutions. Further calcite dissolution experiments were performed in the presence of organic polymers similar to bacterial exudates, cell exopolysaccharides, and analogs of microbial cell envelopes: alginate, lichen extract, humic acid, pectin, and gum xanthan. In no case did the presence of <100 ppm of these organics change calcite dissolution rates by more than a factor of 2.5. Results obtained in this study suggest that the presence of aqueous organic anions negligibly affects calcite forward dissolution rates in most natural environments. Some effect on calcite reactivity may be observed, however, by the presence of organic anions if they change substantially the chemical affinity of the fluid with respect to calcite.

  15. The Biogeochemistry of Chromophoric Dissolved Organic Matter in Coastal Waters

    DTIC Science & Technology

    2016-06-07

    processes controlling the fate and distribution of DOM in coastal waters will allow detailed modeling of the fate of contaminants such as hydrophobic...The Biogeochemistry of Chromophoric Dissolved Organic Matter in Coastal Waters Robert F. Chen Environmental, Coastal and Ocean Sciences University of...coastal waters . Of particular interest is the fate of terrigenous and anthropogenic dissolved organic matter in marine systems. OBJECTIVES 1

  16. Global effects of agriculture on fluvial dissolved organic matter

    NASA Astrophysics Data System (ADS)

    Graeber, Daniel; Boëchat, Iola G.; Encina-Montoya, Francisco; Esse, Carlos; Gelbrecht, Jörg; Goyenola, Guillermo; Gücker, Björn; Heinz, Marlen; Kronvang, Brian; Meerhoff, Mariana; Nimptsch, Jorge; Pusch, Martin T.; Silva, Ricky C. S.; von Schiller, Daniel; Zwirnmann, Elke

    2015-11-01

    Agricultural land covers approximately 40% of Earth’s land surface and affects hydromorphological, biogeochemical and ecological characteristics of fluvial networks. In the northern temperate region, agriculture also strongly affects the amount and molecular composition of dissolved organic matter (DOM), which constitutes the main vector of carbon transport from soils to fluvial networks and to the sea, and is involved in a large variety of biogeochemical processes. Here, we provide first evidence about the wider occurrence of agricultural impacts on the concentration and composition of fluvial DOM across climate zones of the northern and southern hemispheres. Both extensive and intensive farming altered fluvial DOM towards a more microbial and less plant-derived composition. Moreover, intensive farming significantly increased dissolved organic nitrogen (DON) concentrations. The DOM composition change and DON concentration increase differed among climate zones and could be related to the intensity of current and historical nitrogen fertilizer use. As a result of agriculture intensification, increased DON concentrations and a more microbial-like DOM composition likely will enhance the reactivity of catchment DOM emissions, thereby fuelling the biogeochemical processing in fluvial networks, and resulting in higher ecosystem productivity and CO2 outgassing.

  17. Global effects of agriculture on fluvial dissolved organic matter.

    PubMed

    Graeber, Daniel; Boëchat, Iola G; Encina-Montoya, Francisco; Esse, Carlos; Gelbrecht, Jörg; Goyenola, Guillermo; Gücker, Björn; Heinz, Marlen; Kronvang, Brian; Meerhoff, Mariana; Nimptsch, Jorge; Pusch, Martin T; Silva, Ricky C S; von Schiller, Daniel; Zwirnmann, Elke

    2015-11-06

    Agricultural land covers approximately 40% of Earth's land surface and affects hydromorphological, biogeochemical and ecological characteristics of fluvial networks. In the northern temperate region, agriculture also strongly affects the amount and molecular composition of dissolved organic matter (DOM), which constitutes the main vector of carbon transport from soils to fluvial networks and to the sea, and is involved in a large variety of biogeochemical processes. Here, we provide first evidence about the wider occurrence of agricultural impacts on the concentration and composition of fluvial DOM across climate zones of the northern and southern hemispheres. Both extensive and intensive farming altered fluvial DOM towards a more microbial and less plant-derived composition. Moreover, intensive farming significantly increased dissolved organic nitrogen (DON) concentrations. The DOM composition change and DON concentration increase differed among climate zones and could be related to the intensity of current and historical nitrogen fertilizer use. As a result of agriculture intensification, increased DON concentrations and a more microbial-like DOM composition likely will enhance the reactivity of catchment DOM emissions, thereby fuelling the biogeochemical processing in fluvial networks, and resulting in higher ecosystem productivity and CO2 outgassing.

  18. Global effects of agriculture on fluvial dissolved organic matter

    PubMed Central

    Graeber, Daniel; Boëchat, Iola G.; Encina-Montoya, Francisco; Esse, Carlos; Gelbrecht, Jörg; Goyenola, Guillermo; Gücker, Björn; Heinz, Marlen; Kronvang, Brian; Meerhoff, Mariana; Nimptsch, Jorge; Pusch, Martin T.; Silva, Ricky C. S.; von Schiller, Daniel; Zwirnmann, Elke

    2015-01-01

    Agricultural land covers approximately 40% of Earth’s land surface and affects hydromorphological, biogeochemical and ecological characteristics of fluvial networks. In the northern temperate region, agriculture also strongly affects the amount and molecular composition of dissolved organic matter (DOM), which constitutes the main vector of carbon transport from soils to fluvial networks and to the sea, and is involved in a large variety of biogeochemical processes. Here, we provide first evidence about the wider occurrence of agricultural impacts on the concentration and composition of fluvial DOM across climate zones of the northern and southern hemispheres. Both extensive and intensive farming altered fluvial DOM towards a more microbial and less plant-derived composition. Moreover, intensive farming significantly increased dissolved organic nitrogen (DON) concentrations. The DOM composition change and DON concentration increase differed among climate zones and could be related to the intensity of current and historical nitrogen fertilizer use. As a result of agriculture intensification, increased DON concentrations and a more microbial-like DOM composition likely will enhance the reactivity of catchment DOM emissions, thereby fuelling the biogeochemical processing in fluvial networks, and resulting in higher ecosystem productivity and CO2 outgassing. PMID:26541809

  19. Copper binding by dissolved organic matter. II. Variation in type and source of organic matter

    SciTech Connect

    Cabaniss, S.E.; Shuman, M.S.

    1988-01-01

    Copper binding properties of several fulvic acid (FA) and whole water samples are compared by means of an empirical model that was calibrated using Suwannee River FA. Within the calibration limits of the model (pH 5.0-8.5, total Cu concentration 0.1-100 ..mu..M, ionic strength 0.1, and dissolved organic carbon, DOC, 1-10 mg C/1), pCu in solutions of a variety of FA samples are predicted with < 0.2 pCu units root mean square error (RMSE). Within the calibration limits, many whole water sample pCu's are predicted with < 0.3 pCu units RMSE if only one-half of the dissolved organic carbon is assumed to bind Cu. Agreement between prediction and experiment at lower ionic strength is not as good. Variations in Cu binding among different sources of dissolved organic matter appear to be much smaller than those due to chemical factors such as pH and ionic strength.

  20. Carbon cycle: Ocean dissolved organics matter

    NASA Astrophysics Data System (ADS)

    Amon, Rainer M. W.

    2016-12-01

    Large quantities of organic carbon are stored in the ocean, but its biogeochemical behaviour is elusive. Size-age-composition relations now quantify the production of tiny organic molecules as a major pathway for carbon sequestration.

  1. Variation in assimilable organic carbon formation during chlorination of Microcystis aeruginosa extracellular organic matter solutions.

    PubMed

    Sun, Xingbin; Yuan, Ting; Ni, Huishan; Li, Yanpeng; Hu, Yang

    2016-07-01

    This study investigated the chlorination of Microcystis aeruginosa extracellular organic matter (EOM) solutions under different conditions, to determine how the metabolites produced by these organisms affect water safety and the formation of assimilable organic carbon (AOC). The effects of chlorine dosages, coagulant dosage, reaction time and temperature on the formation of AOC were investigated during the disinfection of M.aeruginosa metabolite solutions. The concentration of AOC followed a decreasing and then increasing pattern with increasing temperature and reaction time. The concentration of AOC decreased and then increased with increasing chlorination dosage, followed by a slight decrease at the highest level of chlorination. However, the concentration of AOC decreased continuously with increasing coagulant dosage. The formation of AOC can be suppressed under appropriate conditions. In this study, chlorination at 4mg/L, combined with a coagulant dose of 40mg/L at 20°C over a reaction time of 12hr, produced the minimum AOC.

  2. Potential enzyme activities in cryoturbated organic matter of arctic soils

    NASA Astrophysics Data System (ADS)

    Schnecker, J.; Wild, B.; Rusalimova, O.; Mikutta, R.; Guggenberger, G.; Richter, A.

    2012-12-01

    An estimated 581 Gt organic carbon is stored in arctic soils that are affected by cryoturbtion, more than in today's atmosphere (450 Gt). The high amount of organic carbon is, amongst other factors, due to topsoil organic matter (OM) that has been subducted by freeze-thaw processes. This cryoturbated OM is usually hundreds to thousands of years old, while the chemical composition remains largely unaltered. It has therefore been suggested, that the retarded decomposition rates cannot be explained by unfavourable abiotic conditions in deeper soil layers alone. Since decomposition of soil organic material is dependent on extracellular enzymes, we measured potential and actual extracellular enzyme activities in organic topsoil, mineral subsoil and cryoturbated material from three different tundra sites, in Zackenberg (Greenland) and Cherskii (North-East Siberia). In addition we analysed the microbial community structure by PLFAs. Hydrolytic enzyme activities, calculated on a per gram dry mass basis, were higher in organic topsoil horizons than in cryoturbated horizons, which in turn were higher than in mineral horizons. When calculated on per gram carbon basis, the activity of the carbon acquiring enzyme exoglucanase was not significantly different between cryoturbated and topsoil organic horizons in any of the three sites. Oxidative enzymes, i.e. phenoloxidase and peroxidase, responsible for degradation of complex organic substances, showed higher activities in topsoil organic and cryoturbated horizons than in mineral horizons, when calculated per gram dry mass. Specific activities (per g C) however were highest in mineral horizons. We also measured actual cellulase activities (by inhibiting microbial uptake of products and without substrate addition): calculated per g C, the activities were up to ten times as high in organic topsoil compared to cryoturbated and mineral horizons, the latter not being significantly different. The total amount of PLFAs, as a proxy for

  3. Storage and turnover of organic matter in soil

    SciTech Connect

    Torn, M.S.; Swanston, C.W.; Castanha, C.; Trumbore, S.E.

    2008-07-15

    Historically, attention on soil organic matter (SOM) has focused on the central role that it plays in ecosystem fertility and soil properties, but in the past two decades the role of soil organic carbon in moderating atmospheric CO{sub 2} concentrations has emerged as a critical research area. This chapter will focus on the storage and turnover of natural organic matter in soil (SOM), in the context of the global carbon cycle. Organic matter in soils is the largest carbon reservoir in rapid exchange with atmospheric CO{sub 2}, and is thus important as a potential source and sink of greenhouse gases over time scales of human concern (Fischlin and Gyalistras 1997). SOM is also an important human resource under active management in agricultural and range lands worldwide. Questions driving present research on the soil C cycle include: Are soils now acting as a net source or sink of carbon to the atmosphere? What role will soils play as a natural modulator or amplifier of climatic warming? How is C stabilized and sequestered, and what are effective management techniques to foster these processes? Answering these questions will require a mechanistic understanding of how and where C is stored in soils. The quantity and composition of organic matter in soil reflect the long-term balance between plant carbon inputs and microbial decomposition, as well as other loss processes such as fire, erosion, and leaching. The processes driving soil carbon storage and turnover are complex and involve influences at molecular to global scales. Moreover, the relative importance of these processes varies according to the temporal and spatial scales being considered; a process that is important at the regional scale may not be critical at the pedon scale. At the regional scale, SOM cycling is influenced by factors such as climate and parent material, which affect plant productivity and soil development. More locally, factors such as plant tissue quality and soil mineralogy affect

  4. Dissolved Organic Matter, Organic Matter Optical Properties and Mercury in Rivers and Streams

    NASA Astrophysics Data System (ADS)

    Aiken, G. R.; Brigham, M. E.; Shanley, J. B.; Krabbenhoft, D. P.

    2008-12-01

    Interactions of mercury (Hg) with dissolved organic matter (DOM) play important roles in controlling concentrations, reactivity, bioavailability and transport of Hg in aquatic systems. Recent studies have shown that DOM influences Hg solubility through strong binding interactions and the stabilization of nanocolloidal mercuric sulfide. In this paper we present the results of watershed based studies associated with US Geological Survey NAWQA and WEBB Programs designed to better define the factors controlling the export of Hg in stream systems. We investigated the seasonal and spatial variability of dissolved organic matter quantity and quality, and the concentrations of dissolved Hg and methylmercury (MeHg) in 12 rivers and streams representing a range of watershed types that varied in climate, landscape, Hg deposition and water chemistry. DOM concentrations and composition, based on DOM fractionation and ultraviolet/visible absorption spectroscopic analyses, varied greatly both between sites, and seasonally within sites. Strong relationships were found between DOM and total dissolved Hg concentrations in almost all of the systems. The relationships between total dissolved Hg concentration and hydrophobic organic acid (HPOA) content (aquatic humic substances) were stronger than those observed between Hg and DOM, supporting the hypothesis that interactions between Hg and the HPOA fraction are important drivers for the transport of dissolved Hg in aquatic systems. The relationships between MeHg and DOM and HPOA content were not as strong as those observed with Hg. In all systems, UV absorbance measured at 254 nm correlated strongly with DOM, HPOA content and Hg concentrations. The relationships between DOM concentration and absorbance for the range of systems were quite variable because not all of the dissolved organic carbon in a given sample absorbs UV light to the same degree and each system exhibited a different relationship. However, the relationship between HPOA

  5. Temperature response of litter and soil organic matter decomposition is determined by chemical composition of organic material.

    PubMed

    Erhagen, Björn; Öquist, Mats; Sparrman, Tobias; Haei, Mahsa; Ilstedt, Ulrik; Hedenström, Mattias; Schleucher, Jürgen; Nilsson, Mats B

    2013-12-01

    The global soil carbon pool is approximately three times larger than the contemporary atmospheric pool, therefore even minor changes to its integrity may have major implications for atmospheric CO2 concentrations. While theory predicts that the chemical composition of organic matter should constitute a master control on the temperature response of its decomposition, this relationship has not yet been fully demonstrated. We used laboratory incubations of forest soil organic matter (SOM) and fresh litter material together with NMR spectroscopy to make this connection between organic chemical composition and temperature sensitivity of decomposition. Temperature response of decomposition in both fresh litter and SOM was directly related to the chemical composition of the constituent organic matter, explaining 90% and 70% of the variance in Q10 in litter and SOM, respectively. The Q10 of litter decreased with increasing proportions of aromatic and O-aromatic compounds, and increased with increased contents of alkyl- and O-alkyl carbons. In contrast, in SOM, decomposition was affected only by carbonyl compounds. To reveal why a certain group of organic chemical compounds affected the temperature sensitivity of organic matter decomposition in litter and SOM, a more detailed characterization of the (13) C aromatic region using Heteronuclear Single Quantum Coherence (HSQC) was conducted. The results revealed considerable differences in the aromatic region between litter and SOM. This suggests that the correlation between chemical composition of organic matter and the temperature response of decomposition differed between litter and SOM. The temperature response of soil decomposition processes can thus be described by the chemical composition of its constituent organic matter, this paves the way for improved ecosystem modeling of biosphere feedbacks under a changing climate.

  6. Breakfast staple types affect brain gray matter volume and cognitive function in healthy children.

    PubMed

    Taki, Yasuyuki; Hashizume, Hiroshi; Sassa, Yuko; Takeuchi, Hikaru; Asano, Michiko; Asano, Kohei; Kawashima, Ryuta

    2010-12-08

    Childhood diet is important for brain development. Furthermore, the quality of breakfast is thought to affect the cognitive functioning of well-nourished children. To analyze the relationship among breakfast staple type, gray matter volume, and intelligence quotient (IQ) in 290 healthy children, we used magnetic resonance images and applied voxel-based morphometry. We divided subjects into rice, bread, and both groups according to their breakfast staple. We showed that the rice group had a significantly larger gray matter ratio (gray matter volume percentage divided by intracranial volume) and significantly larger regional gray matter volumes of several regions, including the left superior temporal gyrus. The bread group had significantly larger regional gray and white matter volumes of several regions, including the right frontoparietal region. The perceptual organization index (POI; IQ subcomponent) of the rice group was significantly higher than that of the bread group. All analyses were adjusted for age, gender, intracranial volume, socioeconomic status, average weekly frequency of having breakfast, and number of side dishes eaten for breakfast. Although several factors may have affected the results, one possible mechanism underlying the difference between the bread and the rice groups may be the difference in the glycemic index (GI) of these two substances; foods with a low GI are associated with less blood-glucose fluctuation than are those with a high GI. Our study suggests that breakfast staple type affects brain gray and white matter volumes and cognitive function in healthy children; therefore, a diet of optimal nutrition is important for brain maturation during childhood and adolescence.

  7. High dimensional reflectance analysis of soil organic matter

    NASA Technical Reports Server (NTRS)

    Henderson, T. L.; Baumgardner, M. F.; Franzmeier, D. P.; Stott, D. E.; Coster, D. C.

    1992-01-01

    Recent breakthroughs in remote-sensing technology have led to the development of high spectral resolution imaging sensors for observation of earth surface features. This research was conducted to evaluate the effects of organic matter content and composition on narrowband soil reflectance across the visible and reflective infrared spectral ranges. Organic matter from four Indiana agricultural soils, ranging in organic C content from 0.99 to 1.72 percent, was extracted, fractionated, and purified. Six components of each soil were isolated and prepared for spectral analysis. Reflectance was measured in 210 narrow bands in the 400- to 2500-nm wavelength range. Statistical analysis of reflectance values indicated the potential of high dimensional reflectance data in specific visible, near-infrared, and middle-infrared bands to provide information about soil organic C content, but not organic matter composition. These bands also responded significantly to Fe- and Mn-oxide content.

  8. High dimensional reflectance analysis of soil organic matter

    NASA Technical Reports Server (NTRS)

    Henderson, T. L.; Baumgardner, M. F.; Franzmeier, D. P.; Stott, D. E.; Coster, D. C.

    1992-01-01

    Recent breakthroughs in remote-sensing technology have led to the development of high spectral resolution imaging sensors for observation of earth surface features. This research was conducted to evaluate the effects of organic matter content and composition on narrowband soil reflectance across the visible and reflective infrared spectral ranges. Organic matter from four Indiana agricultural soils, ranging in organic C content from 0.99 to 1.72 percent, was extracted, fractionated, and purified. Six components of each soil were isolated and prepared for spectral analysis. Reflectance was measured in 210 narrow bands in the 400- to 2500-nm wavelength range. Statistical analysis of reflectance values indicated the potential of high dimensional reflectance data in specific visible, near-infrared, and middle-infrared bands to provide information about soil organic C content, but not organic matter composition. These bands also responded significantly to Fe- and Mn-oxide content.

  9. Natural organic matter properties in Swedish agricultural streams

    NASA Astrophysics Data System (ADS)

    Bieroza, Magdalena; Kyllmar, Katarina; Bergström, Lars; Köhler, Stephan

    2016-04-01

    We have analysed natural organic matter (NOM) properties in 18 agricultural streams in Sweden covering a broad range of environmental (climate, soil type), land use and water quality (nutrient and concentrations, pH, alkalinity) characteristics. Stream water samples collected every two weeks within an ongoing Swedish Monitoring Programme for Agriculture have been analysed for total/dissolved organic carbon, absorbance and fluorescence spectroscopy. A number of quantitative and qualitative spectroscopic parameters was calculated to help to distinguish between terrestrially-derived, refractory organic material and autochthonous, labile material indicative of biogeochemical transformations of terrestrial NOM and recent biological production. The study provides insights into organic matter properties and carbon budgets in agricultural streams and improves understanding of how agricultural catchments transform natural and anthropogenic fluxes of organic matter and nutrients to signals observed in receiving waters.

  10. Modeling organic matter stabilization during windrow composting of livestock effluents.

    PubMed

    Oudart, D; Paul, E; Robin, P; Paillat, J M

    2012-01-01

    Composting is a complex bioprocess, requiring a lot of empirical experiments to optimize the process. A dynamical mathematical model for the biodegradation of the organic matter during the composting process has been developed. The initial organic matter expressed by chemical oxygen demand (COD) is decomposed into rapidly and slowly degraded compartments and an inert one. The biodegradable COD is hydrolysed and consumed by microorganisms and produces metabolic water and carbon dioxide. This model links a biochemical characterization of the organic matter by Van Soest fractionating with COD. The comparison of experimental and simulation results for carbon dioxide emission, dry matter and carbon content balance showed good correlation. The initial sizes of the biodegradable COD compartments are explained by the soluble, hemicellulose-like and lignin fraction. Their sizes influence the amplitude of the carbon dioxide emission peak. The initial biomass is a sensitive variable too, influencing the time at which the emission peak occurs.

  11. Preferential sequestration of terrestrial organic matter in boreal lake sediments

    NASA Astrophysics Data System (ADS)

    Guillemette, François; von Wachenfeldt, Eddie; Kothawala, Dolly N.; Bastviken, David; Tranvik, Lars J.

    2017-04-01

    The molecular composition and origin has recently been demonstrated to play a critical role in the persistence of organic matter in lake water, but it is unclear to what degree chemical attributes and sources may also control settling and burial of organic matter in lake sediments. Here we compared the annual contribution of allochthonous and autochthonous sources to the organic matter settling in the water column and present in the sediments of 12 boreal lakes. We used the fluorescence properties and elemental composition of the organic matter to trace its origin and found a consistent pattern of increasing contribution of terrestrial compounds in the sediments as compared to the settling matter, with an annual average allochthony of 87% and 57%, respectively. Seasonal data revealed a predominance of in-lake-produced compounds sinking in the water column in summer. Yet only a slight concurrent decrease in the contribution of terrestrial C to lake sediments was observed during the same period, and sediment allochthony increased again to high levels in autumn. Our results reveal a preferential preservation of allochthonous matter in the sediments and highlight the role of lakes as sequesters of organic carbon primarily originating from the surrounding landscape.

  12. Advanced solid-state NMR spectroscopy of natural organic matter.

    PubMed

    Mao, Jingdong; Cao, Xiaoyan; Olk, Dan C; Chu, Wenying; Schmidt-Rohr, Klaus

    2017-05-01

    Solid-state NMR is essential for the characterization of natural organic matter (NOM) and is gaining importance in geosciences and environmental sciences. This review is intended to highlight advanced solid-state NMR techniques, especially a systematic approach to NOM characterization, and their applications to the study of NOM. We discuss some basics of how to acquire high-quality and quantitative solid-state (13)C NMR spectra, and address some common technical mistakes that lead to unreliable spectra of NOM. The identification of specific functional groups in NOM, primarily based on (13)C spectral-editing techniques, is described and the theoretical background of some recently-developed spectral-editing techniques is provided. Applications of solid-state NMR to investigating nitrogen (N) in NOM are described, focusing on limitations of the widely used (15)N CP/MAS experiment and the potential of improved advanced NMR techniques for characterizing N forms in NOM. Then techniques used for identifying proximities, heterogeneities and domains are reviewed, and some examples provided. In addition, NMR techniques for studying segmental dynamics in NOM are reviewed. We also briefly discuss applications of solid-state NMR to NOM from various sources, including soil organic matter, aquatic organic matter, organic matter in atmospheric particulate matter, carbonaceous meteoritic organic matter, and fossil fuels. Finally, examples of NMR-based structural models and an outlook are provided. Copyright © 2016 Elsevier B.V. All rights reserved.

  13. The search for indigenous lunar organic matter.

    NASA Technical Reports Server (NTRS)

    Sagan, C.

    1972-01-01

    It is argued that the absence of organic compounds from returned lunar samples is to be expected even for a lunar history rich in primordial organics. The sites most likely to yield lunar organic compounds have not been investigated, and there may be an area of investigation conceivably critical to problems in prebiological chemistry and the early history of the solar system awaiting continued lunar exploration, manned or unmanned.

  14. The search for indigenous lunar organic matter.

    NASA Technical Reports Server (NTRS)

    Sagan, C.

    1972-01-01

    It is argued that the absence of organic compounds from returned lunar samples is to be expected even for a lunar history rich in primordial organics. The sites most likely to yield lunar organic compounds have not been investigated, and there may be an area of investigation conceivably critical to problems in prebiological chemistry and the early history of the solar system awaiting continued lunar exploration, manned or unmanned.

  15. Organic Matter in Space (IAU S251)

    NASA Astrophysics Data System (ADS)

    Kwok, Sun; Sanford, Scott

    2008-10-01

    Preface; From the local organising committee; Organising committee; Conference participants; Opening address of Symposium 251 C. Cesarsky; Session I. Observations of organic compounds beyond the Solar System William Irvine, Ewine van Dishoeck, Yvonne Pendleton and Hans Olofsson; Session II. Organic compounds within the Solar System Scott Sandford, Ernst Zinner and Dale Cruikshank; Session III. Laboratory analogues of organic compounds in space Max Bernstein and Thomas Henning; Banquet speech; Author index; Object index.

  16. Organic Matter in Space (IAU S251)

    NASA Astrophysics Data System (ADS)

    Kwok, Sun; Sanford, Scott

    2009-01-01

    Preface; From the local organising committee; Organising committee; Conference participants; Opening address of Symposium 251 C. Cesarsky; Session I. Observations of organic compounds beyond the Solar System William Irvine, Ewine van Dishoeck, Yvonne Pendleton and Hans Olofsson; Session II. Organic compounds within the Solar System Scott Sandford, Ernst Zinner and Dale Cruikshank; Session III. Laboratory analogues of organic compounds in space Max Bernstein and Thomas Henning; Banquet speech; Author index; Object index.

  17. Colloidal stability and ecotoxicity of multiwalled carbon nanotubes: Influence of select organic matters.

    PubMed

    Cerrillo, Cristina; Barandika, Gotzone; Igartua, Amaya; Areitioaurtena, Olatz; Uranga, Nerea; Mendoza, Gemma

    2016-01-01

    In the last few years, the release of multiwalled carbon nanotubes (MWCNTs) into the environment has raised serious concerns regarding their fate and potential impacts. Aquatic organisms constitute an important pathway for their entrance and transfer throughout the food web, and the current demand for standardization of methodologies to analyze the interactions of MWCNTs with them requires aquatic media that represent natural systems. However, the inherent hydrophobicity of MWCNTs and the substances present in natural waters may greatly affect their stability and bioavailability. The present study analyzes the influence of the most referenced synthetic and natural organic matters (Sigma-Aldrich humic acid and Suwannee River natural organic matter) in the agglomeration kinetics and ecotoxicity of MWCNTs, with the aim of determining their suitability to fulfill the current standardization requirements. Natural organic matter provides increased colloidal stability to the MWCNTs' dispersions, which results in higher adverse effects on the key invertebrate organism Daphnia magna. Furthermore, the results obtained with this type of organic matter allow for observation of the important role of the outer diameter and content impurities of MWCNTs in their stability and ecotoxicity on daphnids. Sigma-Aldrich humic acid appeared to alter the response of the organisms to carbon nanotubes compared with that observed in the presence of natural organic matter. © 2015 SETAC.

  18. Organic Matter Sequestration in Oregon Margin Sediments: Tectonic, Climatic and Oceanographic Controls

    NASA Astrophysics Data System (ADS)

    Coccoli, C. A.; Goni, M. A.; Alleau, Y.; Smith, L.

    2014-12-01

    A combination of box, gravity and piston cores from a site on the upper slope off the Umpqua River in the central Oregon margin were used to create a high-resolution record of organic matter burial over the past ~13,000 years. Our objective is to understand how variations in precipitation intensity and frequency, tectonic uplift rates, and topographic relief affect the magnitude and composition of organic matter deposited along this margin. To examine the possible tectonic and climatic factors influencing the land-ocean relationship of Cascadia during the late Holocene, we measured the organic carbon content, carbon-nitrogen ratio, stable isotopic compositions of organic carbon, yields of lignin-derived and lipid-derived constituents, and mineral surface area of collected sediments from box, kasten and piston cores. Decreases in several organic constituents revealed a potential preferential degradation of marine organic matter over time. Lignin phenol abundances oscillated downcore, pointing towards changes in the provenance of terrigenous organic matter transported to this site. Primary component analysis (PCA) illustrated distinct marine and terrestrial organic matter-dominated segments of the record, which will be correlated to eustatic, tectonic and climatic forcings over the late Holocene.

  19. Root Mediation of Soil Organic Matter Feedbacks to Climate Change

    NASA Astrophysics Data System (ADS)

    Pendall, E.; Carrillo, Y.; Nie, M.; Osanai, Y.; Nelson, L. C.; Sanderman, J.; Baldock, J.; Hovenden, M.

    2014-12-01

    The importance of plant roots in carbon cycling and especially soil organic matter (SOM) formation and decomposition has been recently recognized. Up to eighty percent of net primary production may be allocated to roots in ecosystems such as grasslands, where they contribute substantially to SOM formation. On the other hand, root induced priming of SOM decomposition has been implicated in the loss of soil C stocks. Thus, the accurate prediction of climate change impacts on C sequestration in soils largely depends upon improved understanding of root-mediated SOM formation and loss in the rhizosphere. This presentation represents an initial attempt to synthesize belowground observations from free-air CO2 enrichment and warming experiments in two grassland ecosystems. We found that the chemical composition of root carbon is similar to particulate organic matter (POM), but not to mineral associated organic matter (MOM), suggesting less microbial modification during formation of POM than MOM. While root biomass and production rates increased under elevated CO2, POM and MOM fractions did not increase proportionally. We also observed increased root decomposition with elevated CO2, which was likely due to increased soil water and substrate availability, since root C quality (determined by NMR) and decomposition (in laboratory incubations) were unaltered. Further, C quality and decomposition rates of roots differed between C3 and C4 functional types. Changes in root morphology with elevated CO2 have altered root functioning. Increased root surface area and length per unit mass allow increased exploration for nutrients, and potentially enhanced root exudation, rhizodeposition, and priming of SOM decomposition. Controlled chamber experiments demonstrated that uptake of N from SOM was linearly correlated with specific root length. Taken together, these results indicate that root morphology, chemistry and function all play roles in affecting soil C storage and loss, and that

  20. [Effects of Tillage on Distribution of Heavy Metals and Organic Matter Within Purple Paddy Soil Aggregates].

    PubMed

    Shi, Qiong-bin; Zhao, Xiu-lan; Chang, Tong-ju; Lu, Ji-wen

    2016-05-15

    A long-term experiment was utilized to study the effects of tillage methods on the contents and distribution characteristics of organic matter and heavy metals (Cu, Zn, Pb, Cd, Fe and Mn) in aggregates with different sizes (including 1-2, 0.25-1, 0.05-0.25 mm and < 0.05 mm) in a purple paddy soil under two tillage methods including flooded paddy field (FPF) and paddy-upland rotation (PR). The relationship between heavy metals and organic matter in soil aggregates was also analyzed. The results showed that the aggregates of two tillage methods were dominated by 0.05-0.25 mm and < 0.05 mm particle size, respectively. The contents of organic matter in each aggregate decreased with the decrease of aggregate sizes, however, compared to PR, FPF could significantly increase the contents of organic matter in soils and aggregates. The tillage methods did not significantly affect the contents of heavy metals in soils, but FPF could enhance the accumulation and distribution of aggregate, organic matter and heavy metals in aggregates with diameters of 1-2 mm and 0.25-1 mm. Correlation analysis found that there was a negative correlation between the contents of heavy metals and organic matter in soil aggregates, but a positive correlation between the amounts of heavy metal and organic matter accumulated in soil aggregates. From the slope of the correlation analysis equations, we could found that the sensitivities of heavy metals to the changes of soil organic matters followed the order of Mn > Zn > Pb > Cu > Fe > Cd under the same tillage. When it came to the same heavy metal, it was more sensitive in PR than in FPF.

  1. Tracing sources of organic matter in adjacent urban streams having different degrees of channel modification.

    PubMed

    Duan, Shuiwang; Amon, Rainer M W; Brinkmeyer, Robin L

    2014-07-01

    Urbanization and stream-channel modifications affect organic matter concentrations and quality in streams, by altering allochthonous organic matter input and in-stream transformation. This study uses multiple tracers (δ(13)C, δ(15)N, C/N ratio, and chlorophyll-a) to track sources of organic matter in two highly urbanized bayous in Houston (Texas, USA). Wastewater treatment plants (WWTPs) are located in headwaters of both bayous and contribute more than 75% to water flow. Low isotopic relatedness to natural end-members and enriched δ(15)N values suggest the influence of WWTPs on the composition of all organic matter fractions. The two bayous differ in degree of channel improvement resulting in different responses to hydrological conditions. During high flow conditions, the influence of terrestrial organic matter and sediment resuspension was much more pronounced in the Buffalo Bayou than in the concrete-lined White Oak Bayou. Particulate organic matter (POM) in White Oak Bayou had similar values of enriched δ(15)N in all subsegments, whereas in Buffalo Bayou, the degree of δ(15)N enrichment was less in the subsegments of the lower watershed. The difference in riparian zone contributions and interactions with sediments/soils was likely responsible for the compositional differences between the two bayous. Phytoplankton inputs were significantly higher in the bayous, especially in slow-flowing sections, relative to the reference sites, and elevated phytoplankton inputs accounted for the observed stable C isotope differences between FPOM and high molecular weight dissolved organic matter (HMW DOM). Relative to POM, HMW DOM in the bayous was similar to WWTP effluents and showed minor longitudinal variability in both streams suggesting that WWTPs contribute much of the DOM in the systems. Urbanization has a major influence on organic matter sources and quality in these urban water bodies and these changes seem further enhanced by stream channel modifications.

  2. Characterization of Soil Organic Matter in Peat Soil with Different Humification Levels using FTIR

    NASA Astrophysics Data System (ADS)

    Teong, I. T.; Felix, N. L. L.; Mohd, S.; Sulaeman, A.

    2016-07-01

    Peat soil is defined as an accumulation of the debris and vegetative under the water logging condition. Soil organic matter of peat soil was affected by the environmental, weather, types of vegetative. Peat soil was normally classified based on its level of humification. Humification can be defined as the transformation of numerous group of substances (proteins, carbohydrates, lipids, etc.) and individual molecules present in living organic matter into group of substances with similar properties (humic substances). During the peat transformation process, content of soil organic matter also will change. Hence, that is important to determine out the types of the organic compound. FTIR (Fourier Transform Infrared) is a machine which is used to differential soil organic matter by using infrared. Infrared is a types of low energy which can determine the organic minerals. Hence, FTIR can be suitable as an indicator on its level of humification. The main objective of this study is to identify an optimized method to characterization of the soil organic content in different level of humification. The case study areas which had been chosen for this study are Parit Sulong, Batu Pahat and UCTS, Sibu. Peat soil samples were taken by every 0.5 m depth until it reached the clay layer. However, the soil organic matter in different humification levels is not significant. FTIR is an indicator which is used to determine the types of soil, but it is unable to differentiate the soil organic matter in peat soil FTIR can determine different types of the soil based on different wave length. Generally, soil organic matter was found that it is not significant to the level of humification.

  3. Defining the quality of soil organic matter

    EPA Science Inventory

    Soils represent the largest terrestrial pool of carbon (C) and hold approximately two-thirds of all C held in these ecosystems. However, not all C in soils is of equal quality. Some fractions of the organic forms, i.e., soil organic carbon (SOC) have long residence times while ...

  4. Defining the quality of soil organic matter

    EPA Science Inventory

    Soils represent the largest terrestrial pool of carbon (C) and hold approximately two-thirds of all C held in these ecosystems. However, not all C in soils is of equal quality. Some fractions of the organic forms, i.e., soil organic carbon (SOC) have long residence times while ...

  5. Soil organic matter contribution to the NW Mediterranean (Invited)

    NASA Astrophysics Data System (ADS)

    Kim, J.; Buscail, R.; Blokker, J.; Kerhervé, P.; Schouten, S.; Ludwig, W.; Sinninghe Damsté, J. S.

    2009-12-01

    The BIT (Branched and Isoprenoid Tetraether) index has recently been introduced as a proxy for soil organic matter input and is based on the relative abundance of non-isoprenoidal glycerol dialkyl glycerol tetraethers (GDGTs) derived from organisms living in terrestrial environments versus a structurally related isoprenoid GDGT “crenarchaeol” produced by marine Crenarchaeota (Hopmans et al., 2004). In this study, detailed spatial distribution patterns of BIT index were investigated in combination with other organic parameters in the continental margin of the north western Mediterranean. Based on a transect sampling strategy from source (land) to sink (sea) via river, we analysed a variety of soils from the Têt and Rhône basins, suspended particulate matter in waters of the Têt and Rhône rivers flowing into the Gulf of Lions, and marine surface sediments from the Gulf of Lions collected before and after a flood occurred in June 2008. Our study allows us to track BIT values along the transport pathway of soil organic matter and thus to estimate soil organic matter contribution in marine sediments in the Gulf of Lions (NW Mediterranean), a river-dominated continental margin. Hopmans, E.C., Weijers, J.W.H., Schefuss, E., Herfort, L., Sinninghe Damsté, J.S., Schouten, S., 2004. A novel proxy for terrestrial organic matter in sediments based on branched and isoprenoidtetraether lipids. Earth and Planetary Science Letters 224, 107-116.

  6. Effect of different kinds of crop residues on aggregate-protected soil organic matter fractions.

    NASA Astrophysics Data System (ADS)

    Huisz, A.

    2009-04-01

    Organic matter content of soils determines many important soil properties, such as soil structure, fertility and water-management. To improve its fertility and quality, returning different kinds of organic matter to soil has a long historical tradition. Ameliorating of soil and enhancing its fertility by enhancing its carbon stock with organic matter incorporation (like farmyard manure, crop residues or green manure) are general practices, but the extent of the amelioration depends much on several factors such as quantity, quality of the used organic matters. Quality of soil organic matters is affected by their chemical build-up, which differs by their origin (i.e. plant species); and their decomposability is affected by particle-size, protection by soil aggregates and the extent of their association to mineral surfaces. In our paper we investigated the effect of three different kinds of organic matter incorporation on aggregate-protected organic matter fractions: (1) Maize stem (M), (2) Wheat straw (W), and (3) Maize stem & Wheat straw (MW). Our samples were originated from Keszthely, Western Hungary, where the texture of the investigated soil is Sandy loam, the type of soil is Eutric Cambisol (soil type FAO), or Alfisol (soil type USDA). SOM fractions might be isolated and measured by physical fractionation of soil (Cambardella and Elliott (1992), Jensen et al. (1992)). Firstly, microaggregates were separated according to their particle-size with physical fractionation (i.e. wet sieving) (Six et al. (2000a)). Each sample was pre-treated by capillary wetting and was sieved for 2 min in an analytic sieve shaker machine with the following aperture sizes: 2 mm, 250 μm, 53 μm. Therefore 4 fractions were resulted: (1) the >2000 μm large macro-, (2) the 250-2000 μm small macro-, (3) the 53-250 μm microaggregates, and (4) the

  7. Organic Matter Application Can Reduce Copper Toxicity in Tomato Plants

    ERIC Educational Resources Information Center

    Campbell, Brian

    2010-01-01

    Copper fungicides and bactericides are often used in tomato cultivation and can cause toxic Cu levels in soils. In order to combat this, organic matter can be applied to induce chelation reactions and form a soluble complex by which much of the Cu can leach out of the soil profile or be taken up safely by plants. Organic acids such as citric,…

  8. Black Carbon in Estuarine and Coastal Ocean Dissolved Organic Matter

    NASA Technical Reports Server (NTRS)

    Mannino, Antonio; Harvey, H. Rodger

    2003-01-01

    Analysis of high-molecular-weight dissolved organic matter (DOM) from two estuaries in the northwest Atlantic Ocean reveals that black carbon (BC) is a significant component of previously uncharacterized DOM, suggesting that river-estuary systems are important exporters of recalcitrant dissolved organic carbon to the ocean.

  9. PHOTOCHEMICAL TRANSFORMATIONS OF DISSOLVED ORGANIC MATTER IN A BLACKWATER RIVER

    EPA Science Inventory

    We examined photochemical alterations of dissolved organic matter (DOM) from the Satilla River, a high DOC (10-40 mg/liter) blackwater river of southeast Georgia. Water samples were filtered to remove most organisms, placed in quartz tubes, and incubated under natural sunlight a...

  10. Organic Matter Application Can Reduce Copper Toxicity in Tomato Plants

    ERIC Educational Resources Information Center

    Campbell, Brian

    2010-01-01

    Copper fungicides and bactericides are often used in tomato cultivation and can cause toxic Cu levels in soils. In order to combat this, organic matter can be applied to induce chelation reactions and form a soluble complex by which much of the Cu can leach out of the soil profile or be taken up safely by plants. Organic acids such as citric,…

  11. PHOTOCHEMICAL TRANSFORMATIONS OF DISSOLVED ORGANIC MATTER IN A BLACKWATER RIVER

    EPA Science Inventory

    We examined photochemical alterations of dissolved organic matter (DOM) from the Satilla River, a high DOC (10-40 mg/liter) blackwater river of southeast Georgia. Water samples were filtered to remove most organisms, placed in quartz tubes, and incubated under natural sunlight a...

  12. Organic Matter Characteristics and Nutrient Content in Eroded Soils

    NASA Astrophysics Data System (ADS)

    Garcia, Carlos; Hernandez, Teresa; Barahona, Ascension; Costa, Francisco

    1996-01-01

    Twenty-one severely eroded soils of SE Spain (Torriorthent xeric soils) were studied. These soils form a fragile system characterized by soils with a low density of plant cover (<5%), are loamy and occur in a semiarid climate. The soils formerly were used for agricultural purposes but were abandoned at least 15 years ago. These eroded soils had a low total organic carbon content, and their humic substances, humic acid carbon, and carbohydrates were lower compared with soils that had never been cultivated (natural soils). The variables in which the effects of erosion were particularly noted were those related with the active organic matter (respiration and water-soluble organic matter). Those eroded soils with higher salt content showed lower organic matter and carbohydrate contents. Only total nitrogen was correlated with the carbon fractions in the eroded soils.

  13. Interstellar and Solar System organic matter preserved in interplanetary dust

    NASA Astrophysics Data System (ADS)

    Messenger, Scott; Nakamura-Messenger, K.

    Interplanetary dust particles (IDPs) collected in the Earths stratosphere derive from collisions among asteroids and by the disruption and outgassing of short-period comets. Chondritic porous (CP) IDPs are among the most primitive Solar System materials. CP-IDPs have been linked to cometary parent bodies by their mineralogy, textures, C-content, and dynamical histories. CP-IDPs are fragile, fine-grained (< um) assemblages of anhydrous amorphous and crystalline silicates, oxides and sulfides bound together by abundant carbonaceous material. Ancient silicate, oxide, and SiC stardust grains exhibiting highly anomalous isotopic compositions are abundant in CP-IDPs, constituting 0.01-1% of the mass of the particles. The organic matter in CP-IDPs is isotopically anomalous, with enrichments in D/H reaching 50x the terrestrial SMOW value and 15N/14N ratios up to 3x terrestrial standard compositions. These anomalies are indicative of low T (10-100 K) mass fractionation in cold molecular cloud or the outermost reaches of the protosolar disk. The organic matter shows distinct morphologies, including sub-um globules, bubbly textures, featureless, and with mineral inclusions. Infrared spectroscopy and mass spectrometry studies of organic matter in IDPs reveals diverse species including aliphatic and aromatic compounds. The organic matter with the highest isotopic anomalies appears to be richer in aliphatic compounds. These materials also bear similarities and differences with primitive, isotopically anomalous organic matter in carbonaceous chondrite meteorites. The diversity of the organic chemistry, morphology, and isotopic properties in IDPs and meteorites reflects variable preservation of interstellar/primordial components and Solar System processing. One unifying feature is the presence of sub-um isotopically anomalous organic globules among all primitive materials, including IDPs, meteorites, and comet Wild-2 samples returned by the Stardust mission. We will present an

  14. Interstellar and Solar System Organic Matter Preserved in Interplanetary Dust

    NASA Astrophysics Data System (ADS)

    Messenger, Scott R.; Nakamura-Messenger, Keiko

    2015-08-01

    Interplanetary dust particles (IDPs) collected in the Earth’s stratosphere derive from collisions among asteroids and by the disruption and outgassing of short-period comets. Chondritic porous (CP) IDPs are among the most primitive Solar System materials. CP-IDPs have been linked to cometary parent bodies by their mineralogy, textures, C-content, and dynamical histories. CP-IDPs are fragile, fine-grained (< um) assemblages of anhydrous amorphous and crystalline silicates, oxides and sulfides bound together by abundant carbonaceous material. Ancient silicate, oxide, and SiC stardust grains exhibiting highly anomalous isotopic compositions are abundant in CP-IDPs, constituting 0.01 - 1 % of the mass of the particles. The organic matter in CP-IDPs is isotopically anomalous, with enrichments in D/H reaching 50x the terrestrial SMOW value and 15N/14N ratios up to 3x terrestrial standard compositions. These anomalies are indicative of low T (10-100 K) mass fractionation in cold molecular cloud or the outermost reaches of the protosolar disk. The organic matter shows distinct morphologies, including sub-um globules, bubbly textures, featureless, and with mineral inclusions. Infrared spectroscopy and mass spectrometry studies of organic matter in IDPs reveals diverse species including aliphatic and aromatic compounds. The organic matter with the highest isotopic anomalies appears to be richer in aliphatic compounds. These materials also bear similarities and differences with primitive, isotopically anomalous organic matter in carbonaceous chondrite meteorites. The diversity of the organic chemistry, morphology, and isotopic properties in IDPs and meteorites reflects variable preservation of interstellar/primordial components and Solar System processing. One unifying feature is the presence of sub-um isotopically anomalous organic globules among all primitive materials, including IDPs, meteorites, and comet Wild-2 samples returned by the Stardust mission. We will present

  15. GROUNDWATER TRANSPORT OF HYDROPHOBIC ORGANIC COMPOUNDS IN THE PRESENCE OF DISSOLVED ORGANIC MATTER

    EPA Science Inventory

    The effects of dissolved organic matter (DOM) on the transport of hydrophobic organic compounds in soil columns were investigated. Three compounds (naphthalene, phenanthrene and DDT) that spanned three orders of magnitude in water solubility were used. Instead of humic matter, mo...

  16. GROUNDWATER TRANSPORT OF HYDROPHOBIC ORGANIC COMPOUNDS IN THE PRESENCE OF DISSOLVED ORGANIC MATTER

    EPA Science Inventory

    The effects of dissolved organic matter (DOM) on the transport of hydrophobic organic compounds in soil columns were investigated. Three compounds (naphthalene, phenanthrene and DDT) that spanned three orders of magnitude in water solubility were used. Instead of humic matter, mo...

  17. Effect of soil pH and organic matter on the adsorption and desorption of pentachlorophenol.

    PubMed

    Chien, Shui-Wen Chang; Chen, Shou-Hung; Li, Chi-Jui

    2017-08-12

    Various properties of soil affect the partition of organic contaminants within, and conversely, the properties of the organic contaminants also directly affect their partition behavior in soil. Therefore, understanding the effects of various properties of soil on the partition of organic contaminants favors subsequent assessment and provides soil remediation methods for policymakers. This study selected pentachlorophenol (PCP), a common hydrophobic ionizable organic compound in contaminated sites worldwide, as the target contaminant. The effects of pH, organic matter, and the combination of both, on PCP adsorption/desorption behavior in soil were investigated. Phosphoric acid and potassium hydroxide were used as buffer solutions to modify the soil pH by the batch and column extraction methods. A common retail organic fertilizer and fulvic acid were selected as additives to manipulate the soil organic content. Modifying the pH of the soil samples revealed that acidic soil exhibited a greater PCP adsorption rate than alkaline soil. The amount of PCP desorption increased regardless of pH of the in situ contaminated soil. The adsorption of PCP increased with increasing amount of organic additive. However, addition of fulvic acid yielded different results compared to the addition of organic fertilizer. Specifically, the organic fertilizer could not compete with the in situ contaminated soil in PCP adsorption, whereas fulvic acids increased the PCP dissolution to facilitate adsorbing contaminant adsorption. The combined effect of pH modification and organic matter addition provides additional PCP adsorption sites; therefore, adding the organic fertilizer to decrease the soil pH elevated the PCP adsorption rates of the laterite, alluvial, and in situ contaminated soil samples. The study results revealed that both pH and organic matter content are crucial to PCP adsorption/desorption in soil. Therefore, the effects of soil pH and organic matter should be considered in

  18. Characterization of algal organic matter and formation of DBPs from chlor(am)ination.

    PubMed

    Fang, Jingyun; Yang, Xin; Ma, Jun; Shang, Chii; Zhao, Quan

    2010-12-01

    The frequent occurrence of algal blooms in drinking water reservoirs causes problems to water supply, one of which is the release of algal organic matter in high concentrations to affect drinking water quality. Algal organic matter, including extracellular organic matter (EOM) and intracellular organic matter (IOM), was characterized. The formation of a variety of disinfection by-products (DBPs) in chlorination and chloramination of EOM, IOM and algal cells was evaluated. Natural organic matter (NOM) isolated from Suwannee River was also studied for comparison. EOM and IOM were rich in organic nitrogen, which consisted of high (over 10 kDa) and low (70-1000 Da) molecular weight (MW) organic matter, whilst the MW of organic carbon in EOM and IOM was relatively lower. IOM had a higher fraction of total organic nitrogen, with larger proportions of higher MW and more hydrophobic contents than did EOM. IOM also contained higher fractions of free amino acids but lower fractions of aliphatic amines than did EOM. During chlorination of EOM and IOM, organic chloramines were first formed and then became undetectable after 1 d. Chlorination of EOM and IOM produced more nitrogenous DBPs (N-DBPs) and haloaldehydes and less carbonaceous DBPs (C-DBPs) than did chlorination of NOM. Organic chloramines were found after 3-d chloramination of EOM and IOM. The amounts of N-DBPs and C-DBPs formed from chloramination of EOM or IOM were much less than that from NOM. EOM produced less DBPs (except for trichloronitromethane) than did IOM and algal cells in chlorination and chloramination.

  19. Effects of Organic Matter on the Growth of Thiobacillus intermedius

    PubMed Central

    London, Jack; Rittenberg, Sydney C.

    1966-01-01

    London, Jack (University of California, Los Angeles), and Sydney C. Rittenberg. Effects of organic matter on the growth of Thiobacillus intermedius. J. Bacteriol. 91:1062–1069. 1966.—Yeast extract, glucose, glutamate, and other organic materials stimulate the rate and extent of growth of Thiobacillus intermedius in thiosulfate broth. Growth did not occur in glucose or glutamate mineral salts medium in the absence of thiosulfate, although a stable variant was obtained which grows on yeast extract alone. Cells harvested from media supplemented with organic matter have a reduced rate of thiosulfate oxidation (20 to 30% of autotrophic), oxidize the organic supplement, and have an additive rate of oxidation in the presence of both the organic substrate and thiosulfate. Carboxydismutase synthesis is repressed, and the incorporation of bicarbonate carbon into cell material is almost completely eliminated by the presence of organic matter in the growth medium. It is concluded that the availability of organic matter eliminates the autotrophic assimilatory mechanisms of T. intermedius but not its autotrophic energy-generating system. The data are discussed in relation to the existence of “obligate” chemoautotrophic bacteria. PMID:5929743

  20. Fluorescence spectroscopic analysis of organic matter fractions: the current status and a tutorial case study

    USDA-ARS?s Scientific Manuscript database

    Incorporation of animal manures into soils is a key nutrient management strategy for sustainable agricultural systems by supplying plant nutrients and maintaining soil quality. Dissolved organic matter (DOM) released from manures affects many soil chemical processes due to its reactivity with soil ...

  1. SPATIAL AND TEMPORAL DISTRIBUTION OF COLORED DISSOLOVED ORGANIC MATTER (CDOM) IN SOUTHERN NEW ENGALND COASTAL WATERS

    EPA Science Inventory

    The concentration of colored dissolved organic matter (CDOM) is a primary factor affecting the absorption of incident sunlight in coastal and estuarine waters. CDOM is extracted from water-soluble humic substances and transported by runoff into lakes and coastal waters. CDOM is a...

  2. Lasting effect of soil warming on organic matter decomposition depends on tillage practices

    USDA-ARS?s Scientific Manuscript database

    Global warming affects various parts of carbon (C) cycle including acceleration of soil organic matter (SOM) decomposition with strong feedback to atmospheric CO2 concentration. Despite many soil warming studies showed changes of microbial community structure, very few were focused on the effect of ...

  3. Does Accelerated Soil Organic Matter Decomposition in the Presence of Plants Increase Plant N Availability?

    USDA-ARS?s Scientific Manuscript database

    Plant roots can increase microbial activity and soil organic matter (SOM) decomposition via rhizosphere priming effects. It is virtually unknown how differences in the priming effect among plant species and soil type affect N mineralization and plant uptake. In a greenhouse experiment, we tested whe...

  4. INFLUENCE OF DISSOLVED ORGANIC MATTER ON AGROCHEMICAL PHOTOREACTIONS IN AQUATIC ENVIRONMENTS

    EPA Science Inventory

    Pioneering studies by Don Crosby and co-workers demonstrated that the sunlight-induced dissipation of agrochemicals in water often is strongly affected by natural constituents in the water such as nitrate and dissolved organic matter. In this presentation, the focus is on the rol...

  5. Some Contributions of Resistant Compounds to Soil Organic Matter Formation and Nutrient Cycling

    USDA-ARS?s Scientific Manuscript database

    Some biomolecules in soil organic matter (SOM) are intrinsically more resistant to microbial decomposition than are other SOM components. Their resistance can be altered by soil properties and by land management, which can affect the formation and stability of SOM and in turn soil processes. Selecte...

  6. Role of organic matter on boron adsorption-desorption hysteresis of soils

    USDA-ARS?s Scientific Manuscript database

    In this study we evaluated the boron (B) adsorption/desorption reaction in six soils and examined the extent to which organic matter content, as well as incubation time affected B release. Six soils varying in initial pH, clay content, and were selected for the study. Adsorption experiments were c...

  7. CONSTANTS FOR MERCURY BINDING BY DISSOLVED ORGANIC MATTER ISOLATES FROM THE FLORIDA EVERGLADES. (R827653)

    EPA Science Inventory

    Dissolved organic matter (DOM) has been implicated as an important complexing agent for Hg that can affect its mobility and bioavailability in aquatic ecosystems. However, binding constants for natural Hg-DOM complexes are not well known. We employed a competitive ligand appro...

  8. Effects of organic matter removal, soil compaction, and vegetation control on Collembolan populations

    Treesearch

    Robert J. Eaton; Mary Barbercheck; Marilyn Buford; William D. Smith

    2004-01-01

    Collembola can be among the most numerous meso-invertebrates in the forest floor and, through their interaction with primary decomposers in the decomposition food web, may affect litter decomposition and consequently site productivity. This study was conducted to determine whether Collembolan abundance could be impacted by organic matter removal, compaction, and...

  9. Recovery of particulate organic matter dynamics in a stream draining a logged watershed

    Treesearch

    Jackson Webster; E.J. Benfield; Stephen W. Golladay; Matthew E. McTammany

    2014-01-01

    Watershed (WS) 7 at Coweeta was logged in 1977. The stream draining this watershed, Big Hurricane Branch, was affected in many ways. While the stream has recovered in some characteristics, the continuing press disturbance limits many aspects of recovery. In this chapter, we report the long-term pattern of recovery of the organic matter dynamics of this stream.

  10. Depth stratification of soil organic matter as an indicator of multiple ecosystem services

    USDA-ARS?s Scientific Manuscript database

    Soil organic matter is a key component of soil quality that sustains many key soil functions by providing the energy, substrates, and biological diversity to support biological activity, which affects aggregation (important for habitat space, oxygen supply, and preventing soil erosion), infiltration...

  11. Stratification of soil organic matter and its importance on soil and water quality

    USDA-ARS?s Scientific Manuscript database

    Soil organic matter is a key component of soil quality that sustains many important soil functions by providing the energy, substrates, and biological diversity to support biological activity, which affects aggregation (important for habitat space, oxygen supply, and preventing soil erosion), infilt...

  12. Stratification of soil organic matter as an indicator of ecosystem services

    USDA-ARS?s Scientific Manuscript database

    Soil organic matter is a key component of soil quality that sustains many key soil functions by providing the energy, substrates, and biological diversity to support biological activity, which affects aggregation (important for habitat space, oxygen supply, and preventing soil erosion), infiltration...

  13. Impacts of Changing Precipitation on Natural Organic Matter and Microorganisms in Lakes and Reservoirs

    EPA Science Inventory

    Changes in watershed hydrology affect runoff of natural organic matter and contaminants that can in turn have important effects on water quality in lakes. We analyzed data obtain at lakes, reservoirs, and nearby riverine tributaries in Wisconsin (Lake Michigan), the Poconos, and ...

  14. SPATIAL AND TEMPORAL DISTRIBUTION OF COLORED DISSOLOVED ORGANIC MATTER (CDOM) IN SOUTHERN NEW ENGALND COASTAL WATERS

    EPA Science Inventory

    The concentration of colored dissolved organic matter (CDOM) is a primary factor affecting the absorption of incident sunlight in coastal and estuarine waters. CDOM is extracted from water-soluble humic substances and transported by runoff into lakes and coastal waters. CDOM is a...

  15. INFLUENCE OF DISSOLVED ORGANIC MATTER ON AGROCHEMICAL PHOTOREACTIONS IN AQUATIC ENVIRONMENTS

    EPA Science Inventory

    Pioneering studies by Don Crosby and co-workers demonstrated that the sunlight-induced dissipation of agrochemicals in water often is strongly affected by natural constituents in the water such as nitrate and dissolved organic matter. In this presentation, the focus is on the rol...

  16. CONSTANTS FOR MERCURY BINDING BY DISSOLVED ORGANIC MATTER ISOLATES FROM THE FLORIDA EVERGLADES. (R827653)

    EPA Science Inventory

    Dissolved organic matter (DOM) has been implicated as an important complexing agent for Hg that can affect its mobility and bioavailability in aquatic ecosystems. However, binding constants for natural Hg-DOM complexes are not well known. We employed a competitive ligand appro...

  17. Impacts of Changing Precipitation on Natural Organic Matter and Microorganisms in Lakes and Reservoirs

    EPA Science Inventory

    Changes in watershed hydrology affect runoff of natural organic matter and contaminants that can in turn have important effects on water quality in lakes. We analyzed data obtain at lakes, reservoirs, and nearby riverine tributaries in Wisconsin (Lake Michigan), the Poconos, and ...

  18. Stream nutrient enrichment has a greater effect on coarse than on fine benthic organic matter

    Treesearch

    Cynthia J. Tant; Amy D. Rosemond; Matthew R. First

    2013-01-01

    Nutrient enrichment affects bacteria and fungi associated with detritus, but little is known about how biota associated with different size fractions of organic matter respond to nutrients. Bacteria dominate on fine (1 mm) fractions, which are used by different groups of detritivores. We measured the effect of experimental...

  19. Response of Dissolved Organic Matter to Warming and Nitrogen Addition

    NASA Astrophysics Data System (ADS)

    Choi, J. H.; Nguyen, H.

    2014-12-01

    Dissolved Organic Matter (DOM) is a ubiquitous mixture of soluble organic components. Since DOM is produced from the terrestrial leachate of various soil types, soil may influence the chemistry and biology of freshwater through the input of leachate and run-off. The increased temperature by climate change could dramatically change the DOM characteristics of soils through enhanced decomposition rate and losses of carbon from soil organic matter. In addition, the increase in the N-deposition affects DOM leaching from soils by changing the carbon cycling and decomposition rate of soil decay. In this study, we conducted growth chamber experiments using two types of soil (wetland and forest) under the conditions of temperature increase and N-deposition in order to investigate how warming and nitrogen addition influence the characteristics of the DOM leaching from different soil types. This leachate controls the quantity and quality of DOM in surface water systems. After 10 months of incubation, the dissolved organic carbon (DOC) concentrations decreased for almost samples in the range of 7.6 to 87.3% (ANOVA, p<0.05). The specific UV absorption (SUVA) values also decreased for almost samples after the first 3 months and then increased gradually afterward in range of 3.3 to 108.4%. Both time and the interaction between time and the temperature had the statistically significant effects on the SUVA values (MANOVA, p<0.05). Humification index (HIX) showed the significant increase trends during the duration of incubation and temperature for almost the samples (ANOVA, p<0.05). Higher decreases in the DOC values and increases in HIX were observed at higher temperatures, whereas the opposite trend was observed for samples with N-addition. The PARAFAC results showed that three fluorescence components: terrestrial humic (C1), microbial humic-like (C2), and protein-like (C3), constituted the fluorescence matrices of soil samples. During the experiment, labile DOM from the soils was

  20. Land-use Effect on Stream Organic Matter Composition in Two Metropolitan Areas in USA

    NASA Astrophysics Data System (ADS)

    Duan, S.; Kaushal, S.; Amon, R. M.; Brinkmeyer, R.

    2011-12-01

    Urbanization is a form of land-use change that is increasing in coastal watersheds and may affect the quantity and quality of organic carbon delivered to streams and coastal ocean. Here, we examine the changes in optical and isotopic characteristics of organic matter in streams (Gwynns Fall and Buffalo Bayou) draining Baltimore and Houston Metropolitan Areas (USA), relative to nearby less affected forested watersheds. A summer longitudinal sampling in Gwynns Fall along a rural-urban gradient showed increases in dissolved organic carbon (DOC) and fluorescent protein to humic ratio but a decrease in specific UV absorption (SUVA). Parallel Factor modeling shows dominance of terrestrial component of DOC, and the ratio of an unknown component to the component of humic substance was high in urban watersheds and it was positively correlated impervious surface cover (an index of urbanization). Incubation experiments with leaves and stream algae suggest origin of decayed leaf leachate of this component. Conversely, DOM in Buffalo Bayou showed higher intensity of protein-like fluorescence, and the intensity increased longitudinal along a rural-urban gradient but decreased from low-flows to a flooding event. The difference in fluorescent organic matter composition between the two streams probably reflected different management of wastewater in watersheds. Surface sediment collected at sites of sub-watersheds of Gwynns Fall showed changes in particle size, elemental and isotopic composition with land use. Sediment incubations showed that higher temperature (due to urban heat island effect) enhanced loss of labile organic matter and release of refractory organic matter into stream water. Release of reactive soluble phosphorus, loss of nitrogen and reduction of sulfate also occurred at high incubating temperatures, along with mineralization of sediment organic matter. Bed sediment collected along Buffalo Bayou displayed a longitudinal decrease in N-15, probably reflecting the

  1. Removal of dissolved organic matter by anion exchange: Effect of dissolved organic matter properties

    USGS Publications Warehouse

    Boyer, T.H.; Singer, P.C.; Aiken, G.R.

    2008-01-01

    Ten isolates of aquatic dissolved organic matter (DOM) were evaluated to determine the effect that chemical properties of the DOM, such as charge density, aromaticity, and molecular weight, have on DOM removal by anion exchange. The DOM isolates were characterized asterrestrial, microbial, or intermediate humic substances or transphilic acids. All anion exchange experiments were conducted using a magnetic ion exchange (MIEX) resin. The charge density of the DOM isolates, determined by direct potentiometric titration, was fundamental to quantifying the stoichiometry of the anion exchange mechanism. The results clearly show that all DOM isolates were removed by anion exchange; however, differences among the DOM isolates did influence their removal by MIEX resin. In particular, MIEX resin had the greatest affinity for DOM with high charge density and the least affinity for DOM with low charge density and low aromaticity. This work illustrates that the chemical characteristics of DOM and solution conditions must be considered when evaluating anion exchange treatment for the removal of DOM. ?? 2008 American Chemical Society.

  2. Organic content of particulate matter in turbine engine exhaust

    SciTech Connect

    Robertson, D.J.; Groth, R.H.; Blasko, T.J.

    1980-03-01

    Research report:Solid particulate matter, mainly carbon, emitted during fossil fuels combustion contains a variety of organic species adsorbed onto it. Studies were conducted to identify the organic compounds generated by a gas turbine engine. Total organics were determined by gas chromatography and flame ionization. Polynuclear aromatic hydrocarbons, phenols, and nitrosamines were present in samples collected from exhaust gases. (1 diagram, 4 references, 11 tables)

  3. Structural and Isotopic Analysis of Organic Matter in Carbonaceous Chondrites

    NASA Astrophysics Data System (ADS)

    Gilmour, I.

    2003-12-01

    The most ancient organic molecules available for study in the laboratory are those carried to Earth by infalling carbonaceous chondrite meteorites. All the classes of compounds normally considered to be of biological origin are represented in carbonaceous meteorites and, aside from some terrestrial contamination; it is safe to assume that these organic species were produced by nonbiological methods of synthesis. In effect, carbonaceous chondrites are a natural laboratory containing organic molecules that are the product of ancient chemical evolution. Understanding the sources of organic molecules in meteorites and the chemical processes that led to their formation has been the primary research goal. Circumstellar space, the solar nebulae, and asteroidal meteorite parent bodies have all been suggested as environments where organic matter may have been formed. Determination of the provenance of meteoritic organic matter requires detailed structural and isotopic information, and the fall of the Murchison CM2 chondrite in 1969 enabled the first systematic organic analyses to be performed on comparatively pristine samples of extraterrestrial organic material. Prior to that, extensive work had been undertaken on the organic matter in a range of meteorite samples galvanized, in part, by the controversial debate in the early 1960s on possible evidence for former life in the Orgueil carbonaceous chondrite (Fitch et al., 1962; Meinschein et al., 1963). It was eventually demonstrated that the suggested biogenic material was terrestrial contamination ( Fitch and Anders, 1963; Anders et al., 1964); however, the difficulties created by contamination have posed a continuing problem in the analysis and interpretation of organic material in meteorites (e.g., Watson et al., 2003); this has significant implications for the return of extraterrestrial samples by space missions. Hayes (1967) extensively reviewed data acquired prior to the availability of Murchison samples

  4. The temperature sensitivity of organic matter decay in tidal marshes

    NASA Astrophysics Data System (ADS)

    Kirwan, M. L.; Guntenspergen, G. R.; Langley, J. A.

    2014-04-01

    Approximately half of marine carbon sequestration takes place in coastal wetlands, including tidal marshes, where ecosystems accumulate organic matter to build soil elevation and survive sea level rise. The long-term viability of marshes, and their carbon pools, depends in part on how the balance between productivity and decay responds to climate change. Here, we report the sensitivity of soil organic matter decay in tidal marshes to seasonal and latitudinal variations in temperature measured over a 3 year period. We find a moderate increase in decay rate at warmer temperatures (3-6% °C-1, Q10 = 1.3-1.5). Despite the profound differences between microbial metabolism in wetlands and uplands, our results indicate a strong conservation of temperature sensitivity. Moreover, simple comparisons with organic matter production suggest that elevated atmospheric CO2 and warmer temperatures will accelerate carbon accumulation in marsh soils, and enhance their ability to survive sea level rise.

  5. Understanding soil organic matter formation and stabilization (Philippe Duchaufour Medal Lecture)

    NASA Astrophysics Data System (ADS)

    Kögel-Knabner, Ingrid

    2015-04-01

    During the biomass formation/decomposition cycle carbon dioxide (CO2), the main gas driving global warming, is either released from or stabilized in the organic matter of soils. One of the most fundamental functions of soil organic matter is the provision of metabolic energy which drives soil biological processes. In essence, it is the transformation of carbon by plant, micro- and macro-biological processes that provides energy and results in the establishment of a cycle that connects above- and belowground energy transformations. The amount and type of organic matter accumulated in soils is controlled, among other factors by intrinsic soil properties, specifically soil texture and the associated aggregate structures. Soil development leads to the formation of aggregated structures composed of a highly complex mixture of different mineral and organic constituents. The resulting soil type specific carbon sequestration can strongly be affected by soil management, varying greatly with the type and intensity of land use. The processes of formation and stabilization of organic matter through organo-mineral interactions in aggregated soil structures are controlled at the sub-µm scale. Understanding the binding of organic matter in these fine soil structures is thus key to elucidate the biogeochemical soil processes that are part of the carbon cycle as well as to evaluate the effects of soil management on the carbon cycle. I will discuss open questions for understanding these processes and how we can approach them by combining state-of-the-art analytical techniques with innovative experiments.

  6. Organic matter and salinity modify cadmium soil (phyto)availability.

    PubMed

    Filipović, Lana; Romić, Marija; Romić, Davor; Filipović, Vilim; Ondrašek, Gabrijel

    2017-09-26

    Although Cd availability depends on its total concentration in soil, it is ultimately defined by the processes which control its mobility, transformations and soil solution speciation. Cd mobility between different soil fractions can be significantly affected by certain pedovariables such as soil organic matter (SOM; over formation of metal-organic complexes) and/or soil salinity (over formation of metal-inorganic complexes). Phytoavailable Cd fraction may be described as the proportion of the available Cd in soil which is actually accessible by roots and available for plant uptake. Therefore, in a greenhouse pot experiment Cd availability was observed in the rhizosphere of faba bean exposed to different levels of SOM, NaCl salinity (50 and 100mM) and Cd contamination (5 and 10mgkg(-1)). Cd availability in soil does not linearly follow its total concentration. Still, increasing soil Cd concentration may lead to increased Cd phytoavailability if the proportion of Cd(2+) pool in soil solution is enhanced. Reduced Cd (phyto)availability by raised SOM was found, along with increased proportion of Cd-DOC complexes in soil solution. Data suggest decreased Cd soil (phyto)availability with the application of salts. NaCl salinity affected Cd speciation in soil solution by promoting the formation of CdCln(2-n) complexes. Results possibly suggest that increased Cd mobility in soil does not result in its increased availability if soil adsorption capacity for Cd has not been exceeded. Accordingly, chloro-complex possibly operated just as a Cd carrier between different soil fractions and resulted only in transfer between solid phases and not in increased (phyto)availability. Copyright © 2017 Elsevier Inc. All rights reserved.

  7. Organic matter in the Saturn system

    NASA Astrophysics Data System (ADS)

    Sagan, C.; Khare, B. N.; Lewis, J. S.

    Theoretical and experimental predictions of the formation (and outgassing) of organic molecules in the outer solar system are compared with Voyager IRIS spectral data for the Titan atmosphere. The organic molecules of Titan are of interest because the species and processes within the atmosphere of that moon may have had analogs in the early earth atmosphere 4 Gyr ago. The spacecraft data confirmed the presence of alkanes, ethane, propane, ethylene, alkynes, acetylene, butadiene, methylacetylene, nitriles, hydrogen cyanide, cyanoacetylene, and cyanogen, all heavier than the dominant CH4. Experimental simulation of the effects of UV photolysis, alpha and gamma ray irradiation, electrical discharges and proton and electron bombardment of similar gas mixtures has shown the best promise for modeling the reactions producing the Titan atmosphere chemicals.

  8. Organic matter in the Saturn system

    NASA Technical Reports Server (NTRS)

    Sagan, C.; Khare, B. N.; Lewis, J. S.

    1984-01-01

    Theoretical and experimental predictions of the formation (and outgassing) of organic molecules in the outer solar system are compared with Voyager IRIS spectral data for the Titan atmosphere. The organic molecules of Titan are of interest because the species and processes within the atmosphere of that moon may have had analogs in the early earth atmosphere 4 Gyr ago. The spacecraft data confirmed the presence of alkanes, ethane, propane, ethylene, alkynes, acetylene, butadiene, methylacetylene, nitriles, hydrogen cyanide, cyanoacetylene, and cyanogen, all heavier than the dominant CH4. Experimental simulation of the effects of UV photolysis, alpha and gamma ray irradiation, electrical discharges and proton and electron bombardment of similar gas mixtures has shown the best promise for modeling the reactions producing the Titan atmosphere chemicals.

  9. Some features of soil organic matter in parks and adjacent residential areas of Moscow

    NASA Astrophysics Data System (ADS)

    Prokof'eva, T. V.; Rozanova, M. S.; Poputnikov, V. O.

    2013-03-01

    The humus-accumulative horizons of soils from two natural-historical parks of Moscow and the adjacent residential areas were studied. An increase in the concentration of organic matter was observed in the soils of the residential areas. A tendency toward the formation of fulvate humus typical for southern taiga soils persisted in the low-carbonate nongleyed humus-accumulative horizons. At the same time, the transformation rate, character, and content of organic matter in the urban soils were strongly affected by the contamination, calcareous invasion, and remediation of the soils and sediments.

  10. Loss of nitrogenous dissolved organic matter from small lakes

    USGS Publications Warehouse

    Manny, Bruce A.; Otsuki, Akira

    1981-01-01

    To determine how much organic nitrogen is lost from lakes during winter by natural processes, we collected water in fall and winter from six small lakes (area, 5-822 hectares) and separated organic matter dissolved in the water with n-butanol into three fractions--yellow organic acids, a white precipitate, and aqueous (nonextractable) organic matter. The nitrogen content of each fraction was measured by ultraviolet photolysis. About 25-30% of the yellow acid and white precipitate fractions were lost from the water column in each of the lakes during winter. More than 80% of the organic nitrogen dissolved in the lake water samples was found in the aqueous fraction. We believe the white precipitate is part of the humin material in lake waters because it was relatively insoluble in acidic and alkaline solutions.

  11. Organic matter dynamics and stable isotope signature as tracers of the sources of suspended sediment

    NASA Astrophysics Data System (ADS)

    Schindler Wildhaber, Y.; Liechti, R.; Alewell, C.

    2012-06-01

    Suspended sediment (SS) and organic matter in rivers can harm brown trout Salmo trutta by affecting the health and fitness of free swimming fish and by causing siltation of the riverbed. The temporal and spatial dynamics of sediment, carbon (C), and nitrogen (N) during the brown trout spawning season in a small river of the Swiss Plateau were assessed and C isotopes as well as the C/N atomic ratio were used to distinguish autochthonous and allochthonous sources of organic matter in SS loads. The visual basic program IsoSource with 13Ctot and 15N as input isotopes was used to quantify the temporal and spatial sources of SS. Organic matter concentrations in the infiltrated and suspended sediment were highest during low flow periods with small sediment loads and lowest during high flow periods with high sediment loads. Peak values in nitrate and dissolved organic C were measured during high flow and high rainfall, probably due to leaching from pasture and arable land. The organic matter was of allochthonous sources as indicated by the C/N atomic ratio and δ13Corg. Organic matter in SS increased from up- to downstream due to an increase of pasture and arable land downstream of the river. The mean fraction of SS originating from upper watershed riverbed sediment decreased from up to downstream and increased during high flow at all measuring sites along the course of the river. During base flow conditions, the major sources of SS are pasture, forest and arable land. The latter increased during rainy and warmer winter periods, most likely because both triggered snow melt and thus erosion. The measured increase in DOC and nitrate concentrations during high flow support these modeling results. Enhanced soil erosion processes on pasture and arable land are expected with increasing heavy rain events and less snow during winter seasons due to climate change. Consequently, SS and organic matter in the river will increase, which will possibly affect brown trout negatively.

  12. Do soils loose phosphorus with dissolved organic matter?

    NASA Astrophysics Data System (ADS)

    Kaiser, K.; Brödlin, D.; Hagedorn, F.

    2014-12-01

    During ecosystem development and soil formation, primary mineral sources of phosphorus are becoming increasingly depleted. Inorganic phosphorus forms tend to be bound strongly to or within secondary minerals, thus, are hardly available to plants and are not leached from soil. What about organic forms of phosphorus? Since rarely studied, little is known on the composition, mobility, and bioavailability of dissolved organic phosphorus. There is some evidence that plant-derived compounds, such as phytate, bind strongly to minerals as well, while microbial compounds, such as nucleotides and nucleic acids, may represent more mobile fractions of soil phosphorus. In some weakly developed, shallow soils, leaching losses of phosphorus seem to be governed by mobile organic forms. Consequently, much of the phosphorus losses observed during initial stages of ecosystem development may be due to the leaching of dissolved organic matter. However, the potentially mobile microbial compounds are enzymatically hydrolysable. Forest ecosystems on developed soils already depleted in easily available inorganic phosphorus are characterized by rapid recycling of organic phosphors. That can reduce the production of soluble forms of organic phosphorus as well as increase the enzymatic hydrolysis and subsequent plant uptake of phosphorus bound within dissolved organic matter. This work aims at giving an outlook to the potential role of dissolved organic matter in the cycling of phosphorus within developing forest ecosystems, based on literature evidence and first results of ongoing research.

  13. Concurrent photolytic degradation of aqueous methylmercury and dissolved organic matter

    USGS Publications Warehouse

    Fleck, Jacob A.; Gill, Gary W.; Bergamaschi, Brian A.; Kraus, Tamara E.C.; Downing, Bryan D.; Alpers, Charles N.

    2014-01-01

    Monomethyl mercury (MeHg) is a potent neurotoxin that threatens ecosystem viability and human health. In aquatic systems, the photolytic degradation of MeHg (photodemethylation) is an important component of the MeHg cycle. Dissolved organic matter (DOM) is also affected by exposure to solar radiation (light exposure) leading to changes in DOM composition that can affect its role in overall mercury (Hg) cycling. This study investigated changes in MeHg concentration, DOM concentration, and the optical signature of DOM caused by light exposure in a controlled field-based experiment using water samples collected from wetlands and rice fields. Filtered water from all sites showed a marked loss in MeHg concentration after light exposure. The rate of photodemethylation was 7.5 × 10-3 m2 mol-1 (s.d. 3.5 × 10-3) across all sites despite marked differences in DOM concentration and composition. Light exposure also caused changes in the optical signature of the DOM despite there being no change in DOM concentration, indicating specific structures within the DOM were affected by light exposure at different rates. MeHg concentrations were related to optical signatures of labile DOM whereas the percent loss of MeHg was related to optical signatures of less labile, humic DOM. Relationships between the loss of MeHg and specific areas of the DOM optical signature indicated that aromatic and quinoid structures within the DOM were the likely contributors to MeHg degradation, perhaps within the sphere of the Hg-DOM bond. Because MeHg photodegradation rates are relatively constant across freshwater habitats with natural Hg–DOM ratios, physical characteristics such as shading and hydrologic residence time largely determine the relative importance of photolytic processes on the MeHg budget in these mixed vegetated and open-water systems.

  14. Concurrent photolytic degradation of aqueous methylmercury and dissolved organic matter.

    PubMed

    Fleck, Jacob A; Gill, Gary; Bergamaschi, Brian A; Kraus, Tamara E C; Downing, Bryan D; Alpers, Charles N

    2014-06-15

    Monomethyl mercury (MeHg) is a potent neurotoxin that threatens ecosystem viability and human health. In aquatic systems, the photolytic degradation of MeHg (photodemethylation) is an important component of the MeHg cycle. Dissolved organic matter (DOM) is also affected by exposure to solar radiation (light exposure) leading to changes in DOM composition that can affect its role in overall mercury (Hg) cycling. This study investigated changes in MeHg concentration, DOM concentration, and the optical signature of DOM caused by light exposure in a controlled field-based experiment using water samples collected from wetlands and rice fields. Filtered water from all sites showed a marked loss in MeHg concentration after light exposure. The rate of photodemethylation was 7.5×10(-3)m(2)mol(-1) (s.d. 3.5×10(-3)) across all sites despite marked differences in DOM concentration and composition. Light exposure also caused changes in the optical signature of the DOM despite there being no change in DOM concentration, indicating specific structures within the DOM were affected by light exposure at different rates. MeHg concentrations were related to optical signatures of labile DOM whereas the percent loss of MeHg was related to optical signatures of less labile, humic DOM. Relationships between the loss of MeHg and specific areas of the DOM optical signature indicated that aromatic and quinoid structures within the DOM were the likely contributors to MeHg degradation, perhaps within the sphere of the Hg-DOM bond. Because MeHg photodegradation rates are relatively constant across freshwater habitats with natural Hg-DOM ratios, physical characteristics such as shading and hydrologic residence time largely determine the relative importance of photolytic processes on the MeHg budget in these mixed vegetated and open-water systems.

  15. Detection of organic matter in interstellar grains.

    PubMed

    Pendleton, Y J

    1997-06-01

    Star formation and the subsequent evolution of planetary systems occurs in dense molecular clouds, which are comprised, in part, of interstellar dust grains gathered from the diffuse interstellar medium (DISM). Radio observations of the interstellar medium reveal the presence of organic molecules in the gas phase and infrared observational studies provide details concerning the solid-state features in dust grains. In particular, a series of absorption bands have been observed near 3.4 microns (approximately 2940 cm-1) towards bright infrared objects which are seen through large column densities of interstellar dust. Comparisons of organic residues, produced under a variety of laboratory conditions, to the diffuse interstellar medium observations have shown that aliphatic hydrocarbon grains are responsible for the spectral absorption features observed near 3.4 microns (approximately 2940 cm-1). These hydrocarbons appear to carry the -CH2- and -CH3 functional groups in the abundance ratio CH2/CH3 approximately 2.5, and the amount of carbon tied up in this component is greater than 4% of the cosmic carbon available. On a galactic scale, the strength of the 3.4 microns band does not scale linearly with visual extinction, but instead increases more rapidly for objects near the Galactic Center. A similar trend is noted in the strength of the Si-O absorption band near 9.7 microns. The similar behavior of the C-H and Si-O stretching bands suggests that these two components may be coupled, perhaps in the form of grains with silicate cores and refractory organic mantles. The ubiquity of the hydrocarbon features seen in the near infrared near 3.4 microns throughout out Galaxy and in other galaxies demonstrates the widespread availability of such material for incorporation into the many newly forming planetary systems. The similarity of the 3.4 microns features in any organic material with aliphatic hydrocarbons underscores the need for complete astronomical observational

  16. Andic soils : mineralogical effect onto organic matter dynamics, organic matter effect onto mineral dynamics, or both?

    NASA Astrophysics Data System (ADS)

    Basile-Doelsch, Isabelle; Amundson, Ronald; Balesdent, Jérome; Borschneck, Daniel; Bottero, Jean-Yves; Colin, Fabrice; de Junet, Alexis; Doelsch, Emmanuel; Legros, Samuel; Levard, Clément; Masion, Armand; Meunier, Jean-Dominique; Rose, Jérôme

    2014-05-01

    From a strictly mineralogical point of view, weathering of volcanic glass produces secondary phases that are short range ordered alumino-silicates (SRO-AlSi). These are imogolite tubes (2 to 3 nm of diameter) and allophane supposedly spheres (3.5 to 5 nm). Their local structure is composed of a curved gibbsite Al layer and Si tetrahedra in the vacancies (Q0). Proto-imogolites have the same local structure but are roof-shape nanoparticles likely representing the precursors of imogolite and allophanes (Levard et al. 2010). These structures and sizes give to the SRO-AlSi large specific surfaces and high reactivities. In some natural sites, imogolites and allophanes are formed in large quantities. Aging of these phases may lead to the formation of more stable minerals (halloysite, kaolinite and gibbsite) (Torn et al 1997). In natural environments, when the weathering of volcanic glass is associated with the establishment of vegetation, the soils formed are generally andosols. These soils are particularly rich in organic matter (OM), which is explained by the high ability of SRO-AlSi mineral phases to form bonds with organic compounds. In a first order "bulk" approach, it is considered that these bonds strongly stabilize the organic compounds as their mean age can reach more than 10 kyrs in some studied sites (Basile-Doelsch et al. 2005; Torn et al. 1997). However, the structure of the mineral phases present in andosols deserves more attention. Traditionally, the presence in the SRO-AlSi andosols was shown by selective dissolution approaches by oxalate and pyrophosphate. Using spectroscopic methods, mineralogical analysis of SRO-AlSi in andosols samples showed that these mineral phases were neither imogolites nor allophanes as originally supposed, but only less organized structures remained in a state of proto-imogolites (Basile-Doelsch al. 2005 ; Levard et al., 2012). The presence of OM would have an inhibitory effect on the formation of secondary mineral phases, by

  17. Soil Water Content Sensor Response to Organic Matter Content under Laboratory Conditions.

    PubMed

    Fares, Ali; Awal, Ripendra; Bayabil, Haimanote K

    2016-08-05

    Studies show that the performance of soil water content monitoring (SWCM) sensors is affected by soil physical and chemical properties. However, the effect of organic matter on SWCM sensor responses remains less understood. Therefore, the objectives of this study are to (i) assess the effect of organic matter on the accuracy and precision of SWCM sensors using a commercially available soil water content monitoring sensor; and (ii) account for the organic matter effect on the sensor's accuracy. Sand columns with seven rates of oven-dried sawdust (2%, 4%, 6%, 8%, 10%, 12% and 18% v/v, used as an organic matter amendment), thoroughly mixed with quartz sand, and a control without sawdust were prepared by packing quartz sand in two-liter glass containers. Sand was purposely chosen because of the absence of any organic matter or salinity, and also because sand has a relatively low cation exchange capacity that will not interfere with the treatment effect of the current work. Sensor readings (raw counts) were monitored at seven water content levels (0, 0.02, 0.04, 0.08, 0.12, 0.18, 0.24, and 0.30 cm³ cm(-3)) by uniformly adding the corresponding volumes of deionized water in addition to the oven-dry one. Sensor readings were significantly (p < 0.05) affected by the organic matter level and water content. Sensor readings were strongly correlated with the organic matter level (R² = 0.92). In addition, the default calibration equation underestimated the water content readings at the lower water content range (<0.05 cm³ cm(-3)), while it overestimated the water content at the higher water content range (>0.05 cm³ cm(-3)). A new polynomial calibration equation that uses raw count and organic matter content as covariates improved the accuracy of the sensor (RMSE = 0.01 cm³ cm(-3)). Overall, findings of this study highlight the need to account for the effect of soil organic matter content to improve the accuracy and precision of the tested sensor under different soils and

  18. Soil Water Content Sensor Response to Organic Matter Content under Laboratory Conditions

    PubMed Central

    Fares, Ali; Awal, Ripendra; Bayabil, Haimanote K.

    2016-01-01

    Studies show that the performance of soil water content monitoring (SWCM) sensors is affected by soil physical and chemical properties. However, the effect of organic matter on SWCM sensor responses remains less understood. Therefore, the objectives of this study are to (i) assess the effect of organic matter on the accuracy and precision of SWCM sensors using a commercially available soil water content monitoring sensor; and (ii) account for the organic matter effect on the sensor’s accuracy. Sand columns with seven rates of oven-dried sawdust (2%, 4%, 6%, 8%, 10%, 12% and 18% v/v, used as an organic matter amendment), thoroughly mixed with quartz sand, and a control without sawdust were prepared by packing quartz sand in two-liter glass containers. Sand was purposely chosen because of the absence of any organic matter or salinity, and also because sand has a relatively low cation exchange capacity that will not interfere with the treatment effect of the current work. Sensor readings (raw counts) were monitored at seven water content levels (0, 0.02, 0.04, 0.08, 0.12, 0.18, 0.24, and 0.30 cm3 cm−3) by uniformly adding the corresponding volumes of deionized water in addition to the oven-dry one. Sensor readings were significantly (p < 0.05) affected by the organic matter level and water content. Sensor readings were strongly correlated with the organic matter level (R2 = 0.92). In addition, the default calibration equation underestimated the water content readings at the lower water content range (<0.05 cm3 cm−3), while it overestimated the water content at the higher water content range (>0.05 cm3 cm−3). A new polynomial calibration equation that uses raw count and organic matter content as covariates improved the accuracy of the sensor (RMSE = 0.01 cm3 cm−3). Overall, findings of this study highlight the need to account for the effect of soil organic matter content to improve the accuracy and precision of the tested sensor under different soils and

  19. Effect of mismanagement at the state of organic matter in soil

    NASA Astrophysics Data System (ADS)

    Hladký, Jan; Elbl, Jakub; Kynický, Jindřich; Dvořáčková, Helena; Juřička, David; Pecina, Václav; Brtnický, Martin

    2017-04-01

    Organic matter is an essential part of the soil. It affects the physical, chemical, and biological properties of the soil. It is therefore necessary to maintain organic matter in the soil and its quality as the prevention of soil degradation. Loss of organic matter is in the Czech Republic threatened up to 45% of arable soil. The most important reason for the loss of organic matter in the soil is poor management, especially improper crop rotation, cultivation of erosion-prone crops where erosion takes away valuable topsoil with nutrients and organic matter. The aim of our study was to verify the influence of inappropriate management on selected 5 plots in southern Moravia in the Czech Republic. It is the region with the highest incidence of water erosion in the Czech Republic. Were selected plots with significantly sloping, where corn was grown. Samples were taken in the autumn after the harvest, each of topsoil. The sampling sites were placed in positions on the slope where soil was not damaged by erosion, as well as the place greatest damage and the place where washed soil was accumulated. Soil average humus content was for undamaged position on the slope 1.93% and 0.84 quality, the most heavily damaged part of the slope humus content dropped to 1.35% and its quality at only 0.56. In the case of position of accumulated soils was found the average amount of humus 1.70% and 0.90 quality. Humus content and its quality is statistically significantly influenced by water erosion (α = 0.05). The study showed that bad management, when there is not crop rotation adapted to the given conditions and not subjected to any suitable soil-protecting technologies, there is significant damage to soils, which shows mainly organic matter decline and a decline in its quality. Continuation of our study will verify the possibility of stabilization of soil organic matter and draft appropriate technologies.

  20. Effects of different forms of plant-derived organic matter on nitrous oxide emissions.

    PubMed

    Qiu, Qingyan; Wu, Lanfang; Ouyang, Zhu; Li, Binbin; Xu, Yanyan

    2016-07-13

    To investigate the impact of different forms of plant-derived organic matter on nitrous oxide (N2O) emissions, an incubation experiment with the same rate of total nitrogen (N) application was carried out at 25 °C for 250 days. Soils were incorporated with maize-derived organic matter (i.e., maize residue-derived dissolved organic matter and maize residues with different C/N ratios) and an inorganic N fertilizer (urea). The pattern and magnitude of nitrous oxide (N2O) emissions were affected by the form of N applied. Single application of maize-derived organic matter resulted in a higher N2O emission than single application of the inorganic N fertilizer or combined application of the inorganic N fertilizer and maize-derived organic matter. The positive effect of maize residue-derived dissolved organic matter (DOM) addition on N2O emissions was relatively short-lived and mainly occurred at the early stage following DOM addition. In contrast, the positive effect induced by maize residue addition was more pronounced and lasted for a longer period. Single application of maize residues resulted in a substantial decrease in soil nitric nitrogen (NO3(-)-N), but it did not affect the production of N2O. No significant relationship between N2O emission and NO3(-)-N and ammonium nitrogen (NH4(+)-N) suggested that the availability of soil N was not limiting the production of N2O in our study. The key factors affecting soil N2O emission were the soil dissolved organic carbon (DOC) content and metabolism quotient (qCO2). Both of them could explain 87% of the variation in cumulative N2O emission. The C/N ratio of maize-derived organic matter was a poor predictor of N2O emission when the soil was not limited by easily available C and the available N content met the microbial N demands for nitrification and denitrification. The results suggested that the magnitude of N2O emission was determined by the impact of organic amendments on soil C availability and microbial activity

  1. Composition of dissolved organic matter in groundwater

    NASA Astrophysics Data System (ADS)

    Longnecker, Krista; Kujawinski, Elizabeth B.

    2011-05-01

    Groundwater constitutes a globally important source of freshwater for drinking water and other agricultural and industrial purposes, and is a prominent source of freshwater flowing into the coastal ocean. Therefore, understanding the chemical components of groundwater is relevant to both coastal and inland communities. We used electrospray ionization coupled with Fourier-transform ion cyclotron resonance mass spectrometry (ESI FT-ICR MS) to examine dissolved organic compounds in groundwater prior to and after passage through a sediment-filled column containing microorganisms. The data revealed that an unexpectedly high proportion of organic compounds contained nitrogen and sulfur, possibly due to transport of surface waters from septic systems and rain events. We matched 292 chemical features, based on measured mass:charge ( m/z) values, to compounds stored in the Kyoto Encyclopedia of Genes and Genomes (KEGG). A subset of these compounds (88) had only one structural isomer in KEGG, thus supporting tentative identification. Most identified elemental formulas were linked with metabolic pathways that produce polyketides or with secondary metabolites produced by plants. The presence of polyketides in groundwater is notable because of their anti-bacterial and anti-cancer properties. However, their relative abundance must be quantified with appropriate analyses to assess any implications for public health.

  2. Pre-biotic organic matter from comets and asteroids.

    PubMed

    Anders, E

    1989-11-16

    Several authors have suggested that comets or carbonaceous asteroids contributed large amounts of organic matter to the primitive Earth, and thus possibly played a vital role in the origin of life. But organic matter cannot survive the extremely high temperatures (>10(4) K) reached on impact, which atomize the projectile and break all chemical bonds. Only fragments small enough to be gently decelerated by the atmosphere--principally meteors of 10(-12)-10(-6) g--can deliver their organic matter intact. The amount of such 'soft-landed' organic carbon can be estimated from data for the infall rate of meteoritic matter. At present rates, only approximately 0.006 g cm-2 intact organic carbon would accumulate in 10(8) yr, but at the higher rates of approximately 4 x 10(9) yr ago, about 20 g cm-2 may have accumulated in the few hundred million years between the last cataclysmic impact and the beginning of life. It may have included some biologically important compounds that did not form by abiotic synthesis on Earth.

  3. Interstellar and Solar System Organic Matter Preserved in Interplanetary Dust

    NASA Technical Reports Server (NTRS)

    Messenger, Scott; Nakamura-Messenger, Keiko

    2015-01-01

    Interplanetary dust particles (IDPs) collected in the Earth's stratosphere derive from collisions among asteroids and by the disruption and outgassing of short-period comets. Chondritic porous (CP) IDPs are among the most primitive Solar System materials. CP-IDPs have been linked to cometary parent bodies by their mineralogy, textures, C-content, and dynamical histories. CP-IDPs are fragile, fine-grained (less than um) assemblages of anhydrous amorphous and crystalline silicates, oxides and sulfides bound together by abundant carbonaceous material. Ancient silicate, oxide, and SiC stardust grains exhibiting highly anomalous isotopic compositions are abundant in CP-IDPs, constituting 0.01 - 1 % of the mass of the particles. The organic matter in CP-IDPs is isotopically anomalous, with enrichments in D/H reaching 50x the terrestrial SMOW value and 15N/14N ratios up to 3x terrestrial standard compositions. These anomalies are indicative of low T (10-100 K) mass fractionation in cold molecular cloud or the outermost reaches of the protosolar disk. The organic matter shows distinct morphologies, including sub-um globules, bubbly textures, featureless, and with mineral inclusions. Infrared spectroscopy and mass spectrometry studies of organic matter in IDPs reveals diverse species including aliphatic and aromatic compounds. The organic matter with the highest isotopic anomalies appears to be richer in aliphatic compounds. These materials also bear similarities and differences with primitive, isotopically anomalous organic matter in carbonaceous chondrite meteorites. The diversity of the organic chemistry, morphology, and isotopic properties in IDPs and meteorites reflects variable preservation of interstellar/primordial components and Solar System processing. One unifying feature is the presence of sub-um isotopically anomalous organic globules among all primitive materials, including IDPs, meteorites, and comet Wild-2 samples returned by the Stardust mission.

  4. Caracterisation of anthropogenic contribution to the coastal fluorescent organic matter

    NASA Astrophysics Data System (ADS)

    El Nahhal, Ibrahim; Nouhi, Ayoub; Mounier, Stéphane

    2015-04-01

    It is known that most of the coastal fluorescent organic matter is of a terrestrial origin (Parlanti, 2000; Tedetti, Guigue, & Goutx, 2010). However, the contribution of the anthropogenic organic matter to this pool is not well defined and evaluated. In this work the monitoring of little bay (Toulon Bay, France) was done in the way to determine the organic fluorescent response during a winter period. The sampling campaign consisted of different days during the month of December, 2014 ( 12th, 15th, 17th, 19th) on 21 different sampling sites for the fluorescence measurements (without any filtering of the samples) and the whole month of December for the bacterial and the turbidity measurements. Excitation Emission Matrices (EEMs) of fluorescence (from 200 to 400 nm and 220 to 420 nm excitation and emission range) were treated by parallel factor analysis (PARAFAC).The parafac analysis of the EEM datasets was conducted using PROGMEEF software in Matlab langage. On the same time that the turbidity and bacterial measurement (particularly the E.Coli concentration) were determined. The results gives in a short time range, information on the the contribution of the anthropogenic inputs to the coastal fluorescent organic matter. In addition, the effect of salinity on the photochemical degradation of the anthropogenic organic matter (especially those from wastewater treatment plants) will be studied to investigate their fate in the water end member by the way of laboratory experiments. Parlanti, E. (2000). Dissolved organic matter fluorescence spectroscopy as a tool to estimate biological activity in a coastal zone submitted to anthropogenic inputs. Organic Geochemistry, 31(12), 1765-1781. doi:10.1016/S0146-6380(00)00124-8 Tedetti, M., Guigue, C., & Goutx, M. (2010). Utilization of a submersible UV fluorometer for monitoring anthropogenic inputs in the Mediterranean coastal waters. Marine Pollution Bulletin, 60(3), 350-62. doi:10.1016/j.marpolbul.2009.10.018

  5. Processing of Atmospheric Organic Matter by California Radiation Fogs

    NASA Astrophysics Data System (ADS)

    Collett, J. L.; Youngster, S. B.; Lee, T.; Chang, H.; Herckes, P.

    2005-12-01

    In many environments, organic compounds account for a significant fraction of fine particle mass. Because the lifetimes of accumulation mode aerosol particles are governed largely by interactions with clouds, it is important to understand how organic aerosol particles are processed by clouds and fogs. Recently we have examined the organic composition of radiation fogs in central California as well as how these fogs process organic aerosol particles and soluble organic trace gases. Observations indicate that organic matter is a significant component of the fog droplets, comprising approximately one-third of the total solute mass concentration. Concentrations of total organic carbon (TOC) range from approximately 2 to 41 ppmC. Approximately three-fourths of organic matter is typically found in solution as dissolved organic carbon (DOC). A variety of efforts have been made to characterize the composition of the fog organic matter, including analyses by GC/MS, HPLC, IC, NMR and IR. The most abundant species are typically low molecular weight carboxylic acids, small carbonyls and dicarbonyls, and sugar anhydrides. These species have been observed collectively to account for roughly 20-30 percent of the fog DOC. Dicarboxylic acids, frequently used as model compounds for organic CCN, typically account for only a few percent of the organic carbon, with oxalic acid the most important contributor. A significant portion of the fog DOC appears to be comprised of high molecular weight compounds (> 500 Da). Analyses also reveal the presence of organic molecular markers associated with particles produced by various combustion processes. Comparisons of pre-fog and interstitial aerosol samples reveal differences in the relative particle scavenging efficiencies of the fog drops between organic and elemental carbon and between different types of organic carbon. Measurements using a two-stage fog water collector reveal that organic matter tends to be enriched in smaller fog droplets

  6. Aggregation of organic matter by pelagic tunicates

    SciTech Connect

    Pomeroy, L.R.; Deibel, D.

    1980-07-01

    Three genera of pelagic tunicates were fed concentrates of natural seston and an axenic diatom culture. Fresh and up to 4-day-old feces resemble flocculent organic aggregates containing populations of microorganisms, as described from highly productive parts of the ocean, and older feces resemble the nearly sterile flocculent aggregates which are ubiquitous in surface waters. Fresh feces consist of partially digested phytoplankton and other inclusions in an amorphous gelatinous matrix. After 18 to 36 h, a population of large bacteria develops in the matrix and in some of the remains of phytoplankton contained in the feces. From 48 to 96 h, protozoan populations arise which consume the bacteria and sometimes the remains of the phytoplankton in the feces. Thereafter only a sparse population of microorganisms remains, and the particles begin to fragment. Water samples taken in or below dense populations of salps and doliolids contained greater numbers of flocculent aggregates than did samples from adjacent stations.

  7. Search for Organic Matter in Leonid Meteoroids

    NASA Astrophysics Data System (ADS)

    Rairden, Richard L.; Jenniskens, Peter; Laux, Christophe O.

    Near-ultraviolet 300-410 nm spectra of Leonid meteoroids were obtained in an effort to measure the strong B --> X emission band of the radical CN in Leonid meteor spectra at 387 nm. CN is an expected product of ablation of nitrogen containing organic carbon in the meteoroids as well as a possible product of the aerothermochemistry induced by the kinetic energy of the meteor. A slit-less spectrograph with objective grating was deployed on FISTA during the 1999 Leonid Multi-Instrument Aircraft Campaign. Fifteen first-order UV spectra were captured near the 02:00 UT meteor storm peak on November 18. It is found that neutral iron lines dominate the spectrum, with no clear sign of the CN band. The meteor plasma contains less than one CN molecule per 3 Fe atoms at the observed altitude of about 100 km.

  8. Search for Organic Matter in Leonid Meteoroids

    NASA Technical Reports Server (NTRS)

    Rairden, Richard L.; Jenniskens, Peter; Laux, Christophe O.; DeVincenzi, Donald L. (Technical Monitor)

    2000-01-01

    Near-ultraviolet 300-410 nm spectra of Leonid meteors were obtained in an effort to measure the strong B to X emission band of the radical CN in Leonid meteor spectra at 387 nm. CN is an expected product of ablation of nitrogen containing organic carbon in the meteoroids as well as a possible product of the aerothermochemistry induced by the kinetic energy of the meteor. A slitless spectrograph with objective grating was deployed on FISTA during the 1999 Leonid Multi-Instrument Aircraft Campaign. Fifteen first-order UV spectra were captured near the 02:00 UT meteor storm peak on November 18. It is found that neutral iron lines dominate the spectrum, with no clear sign of the CN band. The meteor plasma contains less than one CN molecule per three Fe atoms at the observed altitude of about 100 km.

  9. White Matter Development in Adolescence: The Influence of Puberty and Implications for Affective Disorders

    PubMed Central

    Ladouceur, Cecile D.; Peper, Jiska S.; Crone, Eveline A.; Dahl, Ronald E.

    2011-01-01

    There have been rapid advances in understanding a broad range of changes in brain structure and function during adolescence, and a growing interest in identifying which of these neurodevelopmental changes are directly linked with pubertal maturation—at least in part because of their potential to provide insights into the numerous emotional and behavioral health problems that emerge during this developmental period. This review focuses on what is known about the influence of puberty on white matter development in adolescence. We focus on white matter because of its role in providing the structural architectural organization of the brain and as a structural correlate of communication within complex neural systems. We begin with a review of studies that report sex differences or sex by age interactions in white matter development as these findings can provide, although indirectly, information relevant to puberty-related changes. Studies are also critically reviewed based on methodological procedures used to assess pubertal maturation and relations with white matter changes. Findings are discussed in light of their implications for the development of neural systems underlying the regulation of emotion and behavior and how alterations in the development of these systems may mediate risk for affective disorders in vulnerable adolescents. PMID:22247751

  10. Effect of Dissolved Organic Matter on Basalt Weathering Rates under Flow Conditions

    NASA Astrophysics Data System (ADS)

    Dontsova, K.; Steefel, C. I.; Chorover, J. D.

    2009-12-01

    Rock weathering is an important aspect of soil formation that is tightly coupled to the progressive colonization of grain surfaces by microorganisms and plant tissue, both of which are associated with the exudation of complexing ligands and reducing equivalents that are incorporated into dissolved organic matter. As part of a larger hillslope experimental study being designed for Biosphere 2 (Oracle, AZ), we seek to determine how the presence and concentration of dissolved organic matter affects the incongruent dissolution rates of basaltic tuff. Saturated flow column experiments are being conducted using plant-derived soluble organic matter solutions of variable concentrations, and comparisons are being made to experiments conducted with malic acid, a low-molecular weight organic acid commonly exuded into the rhizosphere. Dissolved organic matter was extracted from Ponderosa Pine forest floor and was characterized for aqueous geochemical parameters (pH, EC, ion balance, DOC/TN) and also for DOC composition (UV-Vis, FTIR spectroscopy). Column effluents are being analyzed for major and trace cations, anions, silica and organic solutes. Dissolution rates of primary minerals and precipitation rates of secondary phases will be estimated by fitting the data to a numerical reactive transport model, CrunchFlow2007. At the end of the fluid flow experiment, column materials will be analyzed for biogeochemical composition to detect preferential dissolution of specific phases, the precipitation of new ones, and to monitor the associated formation of biofilms. The influence of organic solutions on weathering patterns of basalt will be discussed.

  11. Chemotaxis toward phytoplankton drives organic matter partitioning among marine bacteria.

    PubMed

    Smriga, Steven; Fernandez, Vicente I; Mitchell, James G; Stocker, Roman

    2016-02-09

    The microenvironment surrounding individual phytoplankton cells is often rich in dissolved organic matter (DOM), which can attract bacteria by chemotaxis. These "phycospheres" may be prominent sources of resource heterogeneity in the ocean, affecting the growth of bacterial populations and the fate of DOM. However, these effects remain poorly quantified due to a lack of quantitative ecological frameworks. Here, we used video microscopy to dissect with unprecedented resolution the chemotactic accumulation of marine bacteria around individual Chaetoceros affinis diatoms undergoing lysis. The observed spatiotemporal distribution of bacteria was used in a resource utilization model to map the conditions under which competition between different bacterial groups favors chemotaxis. The model predicts that chemotactic, copiotrophic populations outcompete nonmotile, oligotrophic populations during diatom blooms and bloom collapse conditions, resulting in an increase in the ratio of motile to nonmotile cells and in the succession of populations. Partitioning of DOM between the two populations is strongly dependent on the overall concentration of bacteria and the diffusivity of different DOM substances, and within each population, the growth benefit from phycospheres is experienced by only a small fraction of cells. By informing a DOM utilization model with highly resolved behavioral data, the hybrid approach used here represents a new path toward the elusive goal of predicting the consequences of microscale interactions in the ocean.

  12. Chemotaxis toward phytoplankton drives organic matter partitioning among marine bacteria

    PubMed Central

    Smriga, Steven; Fernandez, Vicente I.; Mitchell, James G.; Stocker, Roman

    2016-01-01

    The microenvironment surrounding individual phytoplankton cells is often rich in dissolved organic matter (DOM), which can attract bacteria by chemotaxis. These “phycospheres” may be prominent sources of resource heterogeneity in the ocean, affecting the growth of bacterial populations and the fate of DOM. However, these effects remain poorly quantified due to a lack of quantitative ecological frameworks. Here, we used video microscopy to dissect with unprecedented resolution the chemotactic accumulation of marine bacteria around individual Chaetoceros affinis diatoms undergoing lysis. The observed spatiotemporal distribution of bacteria was used in a resource utilization model to map the conditions under which competition between different bacterial groups favors chemotaxis. The model predicts that chemotactic, copiotrophic populations outcompete nonmotile, oligotrophic populations during diatom blooms and bloom collapse conditions, resulting in an increase in the ratio of motile to nonmotile cells and in the succession of populations. Partitioning of DOM between the two populations is strongly dependent on the overall concentration of bacteria and the diffusivity of different DOM substances, and within each population, the growth benefit from phycospheres is experienced by only a small fraction of cells. By informing a DOM utilization model with highly resolved behavioral data, the hybrid approach used here represents a new path toward the elusive goal of predicting the consequences of microscale interactions in the ocean. PMID:26802122

  13. Mercury reduction and complexation by natural organic matter

    SciTech Connect

    Gu, Baohua; Bian, Yongrong; Miller, Carrie L; Dong, Wenming; Jiang, Xin; Liang, Liyuan

    2011-01-01

    Mercuric Hg(II) species form complexes with natural dissolved organic matter (DOM) such as humic acid (HA), and this binding is known to affect the chemical and biological transformation and cycling of mercury in aquatic environments. Dissolved elemental mercury, Hg(0), is also widely observed in sediments and water. However, reactions between Hg(0) and DOM have rarely been studied in anoxic environments. Here, under anoxic dark conditions we show strong interactions between reduced HA and Hg(0) through thiol-ligand induced oxidative complexation with an estimated binding capacity of about 3.5 umol Hg(0)/g HA and a partitioning coefficient greater than 10^6 mL/g. We further demonstrate that Hg(II) can be effectively reduced to Hg(0) in the presence of as little as 0.2 mg/L reduced HA, whereas production of purgeable Hg(0) is inhibited by complexation as HA concentration increases. This dual role played by DOM in the reduction and complexation of mercury is likely widespread in anoxic sediments and water and can be expected to significantly influence the mercury species transformations and biological uptake that leads to the formation of toxic methylmercury.

  14. Sorption of endosulphan sulphate in soil organic matter.

    PubMed

    Chowdhury, Raja; Atwater, James W; Hall, Ken J; Parkinson, Paula

    2011-12-01

    Sorption of endosulphan sulphate in soil organic matter was investigated using Standard Elliot soil humic acid (HA) and soil fulvic acid (FA) at two ionic strengths (0.001 and 0.01). It was observed that divalent calcium ion and ionic strength affect the sorption of endosulphan sulphate in HA. All the experiments were carried out at pH 6.7 +/- 0.1. In the presence and absence of calcium (ionic strength 0.001), the solubility enhancement method was used to estimate the sorption coefficients of endosulphan sulphate in HA. For FA, the solubility enhancement method was used to estimate the sorption coefficients at an ionic strength of 0.001 (in the presence of calcium) and 0.01. The presence of calcium was found to significantly enhance (alpha = 0.01) the solubility of endosulphan sulphate in HA. Sorption coefficients at pH 6.7, obtained using the solubility enhancement method, were found to be 10-21 L/g in HA and 6 L/g in FA (in the presence of calcium). Increase in ionic strength from 0.001 to 0.01 decreased the sorption of endosulphan sulphate in HA. The effect of ionic strength and calcium on the sorption of endosulphan sulphate was most satisfactorily explained on the basis of the Donnan volume.

  15. Vehicular emissions of organic particulate matter in Sao Paulo, Brazil

    NASA Astrophysics Data System (ADS)

    Oyama, B. S.; Andrade, M. F.; Herckes, P.; Dusek, U.; Röckmann, T.; Holzinger, R.

    2015-12-01

    Vehicular emissions have a strong impact on air pollution in big cities. Many factors affect these emissions: type of vehicle, type of fuel, cruising velocity, and brake use. This study focused on emissions of organic compounds by Light (LDV) and Heavy (HDV) duty vehicle exhaust. The study was performed in the city of Sao Paulo, Brazil, where vehicles run on different fuels: gasoline with 25 % ethanol (called gasohol), hydrated ethanol, and diesel (with 5 % of biodiesel). The vehicular emissions are an important source of pollutants and the principal contribution to fine particulate matter (smaller than 2.5 μm, PM2.5) in Sao Paulo. The experiments were performed in two tunnels: Janio Quadros (TJQ) where 99 % of the vehicles are LDV, and Rodoanel Mario Covas (TRA) where up to 30 % of the fleet was HDV. The PM2.5 samples were collected on quartz filters in May and July 2011 at TJQ and TRA, respectively, using two samplers operating in parallel. The samples were analyzed by Thermal-Desorption Proton-Transfer-Reaction Mass-Spectrometry (TD-PTR-MS), and by Thermal-Optical Transmittance (TOT). The organic aerosol (OA) desorbed at TD-PTR-MS represented around 30 % of the OA estimated by the TOT method, mainly due to the different desorption temperatures, with a maximum of 870 and 350 °C for TOT and TD-PTR-MS, respectively. Average emission factors (EF) organic aerosol (OA) and organic carbon (OC) were calculated for HDV and LDV fleet. We found that HDV emitted more OA and OC than LDV, and that OC emissions represented 36 and 43 % of total PM2.5 emissions from LDV and HDV, respectively. More than 700 ions were identified by TD-PTR-MS and the EF profiles obtained from HDV and LDV exhibited distinct features. Nitrogen-containing compounds measured in the desorbed material up to 350 °C contributed around 20 % to the EF values for both types of vehicles, possibly associated with incomplete fuel burning. Additionally, 70 % of the organic compounds measured from the aerosol

  16. D-depleted organic matter and graphite in the Abee enstatite chondrite

    NASA Astrophysics Data System (ADS)

    Remusat, L.; Rouzaud, J.-N.; Charon, E.; Le Guillou, C.; Guan, Y.; Eiler, J. M.

    2012-11-01

    through exchange and reaction with gaseous molecular hydrogen during their synthesis. In contrast, Abee organic matter was likely synthesized in a neutral (i.e., not ionized) environment where thermodynamic processes at equilibrium most likely controlled its isotopic composition. This organic matter could have been accreted in a minor component of Abee like the dark inclusions without (or prior to) exposure to the radiation responsible for D enrichments in other meteoritic organics. During the last brecciation events that have affected the Abee parent body, these inclusions could have been mixed with other Abee components. The properties of this organic matter can be interpreted as an indication that thermodynamic processes acted in the synthesis of organic matter in the protosolar disk, in addition to ion/molecule and gas/grains reaction witnessed by the D-rich insoluble organic matter contained in carbonaceous chondrites.

  17. Lyophilization and Reconstitution of Reverse Osmosis Concentrated Natural Organic Matter

    EPA Science Inventory

    Disinfection by-product (DBP) research can be complicated by difficulties in shipping large water quantities and changing natural organic matter (NOM) characteristics over time. To overcome these issues, it is advantageous to have a reliable method for concentrating and preservin...

  18. Quenching and Sensitizing Fullerene Photoreactions by Natural Organic Matter

    EPA Science Inventory

    Effects of natural organic matter (NOM) on the photoreaction kinetics of fullerenes (i.e., C60 and fullerenol) were investigated using simulated sunlight and monochromatic radiation (365 nm). NOM from several sources quenched (slowed) the photoreaction of C60 aggregates in water ...

  19. Lyophilization and Reconstitution of Reverse Osmosis Concentrated Natural Organic Matter

    EPA Science Inventory

    Disinfection by-product (DBP) research can be complicated by difficulties in shipping large water quantities and changing natural organic matter (NOM) characteristics over time. To overcome these issues, it is advantageous to have a reliable method for concentrating and preservin...

  20. Photoproduction of Carbon Monoxide from Natural Organic Matter

    EPA Science Inventory

    Pioneering studies by Valentine provided early kinetic results that used carbon monoxide (CO) production to evaluate the photodecomposition of aquatic natural organic matter (NOM) . (ES&T 1993 27 409-412). Comparatively few kinetic studies have been conducted of the photodegradat...

  1. Soil organic matter as sole indicator of soil degradation

    Treesearch

    S.E. Obalum; G.U. Chibuike; S. Peth; Ying Ouyang

    2017-01-01

    Soil organic matter (SOM) is known to play vital roles in the maintenance and improvement of many soil properties and processes. These roles, which largely influence soil functions, are a pool of specific contributions of different components of SOM. The soil functions, in turn, normally define the level of soil degradation, viewed as quantifiable temporal changes in a...

  2. Photoproduction of Carbon Monoxide from Natural Organic Matter

    EPA Science Inventory

    Pioneering studies by Valentine provided early kinetic results that used carbon monoxide (CO) production to evaluate the photodecomposition of aquatic natural organic matter (NOM) . (ES&T 1993 27 409-412). Comparatively few kinetic studies have been conducted of the photodegradat...

  3. Quenching and Sensitizing Fullerene Photoreactions by Natural Organic Matter

    EPA Science Inventory

    Effects of natural organic matter (NOM) on the photoreaction kinetics of fullerenes (i.e., C60 and fullerenol) were investigated using simulated sunlight and monochromatic radiation (365 nm). NOM from several sources quenched (slowed) the photoreaction of C60 aggregates in water ...

  4. Calculation of the enthalpy of formation of coal organic matter

    SciTech Connect

    A.M. Gyul'maliev; M.Ya. Shpirt

    2008-10-15

    The enthalpy of formation for the organic matter of coals in the coal rank series was calculated from the heat of the complete combustion reaction. Three variants were considered in which the experimental heating values and the values found from the correlation equation or calculated using the Mendeleev formula were taken as the heat of the complete combustion of coals.

  5. Organic matter in a coal ball: Peat or coal?

    USGS Publications Warehouse

    Hatcher, P.G.; Lyons, P.C.; Thompson, C.L.; Brown, F.W.; Maciel, G.E.

    1982-01-01

    Chemical analyses of morphologically preserved organic matter in a Carboniferous coal ball reveal that the material is coalified to a rank approximately equal to that of the surrounding coal. Hence, the plant tissues in the coal ball were chemically altered by coalification processes and were not preserved as peat. Copyright ?? 1982 AAAS.

  6. Advanced solid-state NMR spectroscopy of natural organic matter

    USDA-ARS?s Scientific Manuscript database

    Solid-state NMR is essential for the characterization of natural organic matter (NOM) and is gaining importance in geosciences and environmental sciences. This review is intended to highlight advanced solid-state NMR techniques, especially the systematic approach to NOM characterization, and their ...

  7. The Relationship Between Dissolved Organic Matter Composition and Organic Matter Optical Properties in Freshwaters

    NASA Astrophysics Data System (ADS)

    Aiken, G.; Spencer, R. G.; Butler, K.

    2010-12-01

    Dissolved organic matter (DOM) chemistry and flux are potentially useful, albeit, underutilized, indicators of watershed characteristics, climate influences on watershed hydrology and soils, and changes associated with resource management. Source materials, watershed geochemistry, oxidative processes and hydrology exert strong influences on the nature and reactivity of DOM in aquatic systems. The molecules that comprise DOM, in turn, control a number of environmental processes important for ecosystem function including light penetration and photochemistry, microbial activity, mineral dissolution/precipitation, and the transport and reactivity of hydrophobic compounds and metals (e.g. Hg). In particular, aromatic molecules derived from higher plants exert strong controls on aquatic photochemistry, and on the transport and biogeochemistry of metals. Assessment of DOM composition and transport, therefore, can provide a basis for understanding watershed processes and biogeochemistry of rivers and streams. Here we present results of multi-year studies designed to assess the seasonal and spatial variability of DOM quantity and quality for 57 North American Rivers. DOM concentrations and composition, based on DOM fractionation on XAD resins, ultraviolet (UV)/visible absorption and fluorescence spectroscopic analyses, and specific compound analyses, varied greatly both between sites and seasonally within a given site. DOM in these rivers exhibited a wide range of concentration (<80 to >4000 µM C* L-1) and specific ultra-violet absorbance at 254 nm (SUVA254) (0.6 to 5 L *mg C-1 *m-1), an optical measurement that is an indicator of aromatic carbon content. In almost all systems, UV absorbance measured at specific wavelengths (e.g. 254 nm) correlated strongly with DOM and hydrophobic organic acid (HPOA) content (aquatic humic substances). The relationships between dissolved organic carbon (DOC) concentration and absorbance for the range of systems were quite variable due to

  8. Biodegradability of anthropogenic organic matter in polluted rivers using fluorescence, UV, and BDOC measurements.

    PubMed

    Knapik, Heloise G; Fernandes, Cristovão V S; de Azevedo, Julio Cesar R; dos Santos, Mauricius M; Dall'Agnol, Patrícia; Fontane, Darrell G

    2015-03-01

    The presence of highly urbanized and polluted areas affects both the quantity and the composition of organic matter in rivers through effluent loads and urban runoff discharges in watersheds. In such context, this paper aims to evaluate the biodegradability of anthropogenic organic matter in polluted rivers. Stream water samples were collected in three different sites considering a non-impacted area, a highly urbanized site located after a sewage treatment plant, and a site downstream of the watershed. For the biodegradation experiment, two adaptations of biodegradable dissolved organic carbon (BDOC) essay were evaluated to assess the decomposition rates between 10 days, with added nutrients, in the dark at 20 °C. The organic matter biodegradation was monitored by distinct parameters such as dissolved organic carbon (DOC), total organic carbon (TOC), particulate organic carbon (POC), fluorescence excitation-emission matrix (EEM), and UV absorbance measurements. The measured BDOC ranged from 0.8 mg/L at site IG01 (low anthropogenic occupation) to 4.2 mg/L at site IG02 (high impacted area), with averaged percentage of initial DOC ranging from 20 to 56 %, while an average of 28 % up to 95 % of POC can be considered as biodegradable. This pattern of biodegradation of fluorescent components was also observed through a decrease of tryptophan-like and tyrosine-like fluorescence peak intensity during the incubation time. The results also showed a higher decrease of humic-like fluorescence peak intensity at polluted sites (IG02 and IG05). Our experimental approach and monitoring strategy suggests that the evaluation of the organic matter biodegradability is essential to understand the fate and transformation mechanism of organic matter in urbanized and polluted rivers. And, considering a water quality planning and management perspective, this approach is important to identify the presence and location of organic compounds potentially important for dissolved oxygen

  9. Sources and Processes Affecting Particulate Matter Pollution over North China

    NASA Astrophysics Data System (ADS)

    Zhang, L.; Shao, J.; Lu, X.; Zhao, Y.; Gong, S.; Henze, D. K.

    2015-12-01

    Severe fine particulate matter (PM2.5) pollution over North China has received broad attention worldwide in recent years. Better understanding the sources and processes controlling pollution over this region is of great importance with urgent implications for air quality policy. We will present a four-dimensional variational (4D-Var) data assimilation system using the GEOS-Chem chemical transport model and its adjoint model at 0.25° × 0.3125° horizontal resolution, and apply it to analyze the factors affecting PM2.5 concentrations over North China. Hourly surface observations of PM2.5 and sulfur dioxide (SO2) from the China National Environmental Monitoring Center (CNEMC) can be assimilated into the model to evaluate and constrain aerosol (primary and precursors) emissions. Application of the data assimilation system to the APEC period (the Asia-Pacific Economic Cooperation summit; 5-11 November 2014) shows that 46% of the PM2.5 pollution reduction during APEC ("The APEC Blue") can be attributed to meteorology conditions and the rest 54% to emission reductions due to strict emission controls. Ammonia emissions are shown to significantly contribute to PM2.5 over North China in the fall. By converting sulfuric acid and nitric acid to longer-lived ammonium sulfate and ammonium nitrate aerosols, ammonia plays an important role in promoting their regional transport influences. We will also discuss the pathways and mechanisms of external long-range transport influences to the PM2.5 pollution over North China.

  10. CHROMOPHORIC DISSOLVED ORGANIC MATTER (CDOM) DERIVED FROM DECOMPOSITION OF VARIOUS VASCULAR PLANT AND ALGAL SOURCES

    EPA Science Inventory

    Chromophoric dissolved organic (CDOM) in aquatic environments is derived from the microbial decomposition of terrestrial and microbial organic matter. Here we present results of studies of the spectral properties and photoreactivity of the CDOM derived from several organic matter...

  11. Organic and Inorganic Matter in Louisiana Coastal Waters: Vermilion, Atchafalaya, Terrebonne, Barataria, and Mississippi Regions.

    EPA Science Inventory

    Chromophoric dissolved organic matter (CDOM) spectral absorption, dissolved organic carbon (DOC) concentration, and the particulate fraction of inorganic (PIM) and organic matter (POM) were measured in Louisiana coastal waters at Vermilion, Atchafalaya, Terrebonne, Barataria, and...

  12. CHROMOPHORIC DISSOLVED ORGANIC MATTER (CDOM) DERIVED FROM DECOMPOSITION OF VARIOUS VASCULAR PLANT AND ALGAL SOURCES

    EPA Science Inventory

    Chromophoric dissolved organic (CDOM) in aquatic environments is derived from the microbial decomposition of terrestrial and microbial organic matter. Here we present results of studies of the spectral properties and photoreactivity of the CDOM derived from several organic matter...

  13. Soil texture analysis revisited: Removal of organic matter matters more than ever

    PubMed Central

    Schjønning, Per; Watts, Christopher W.; Christensen, Bent T.; Munkholm, Lars J.

    2017-01-01

    Exact estimates of soil clay (<2 μm) and silt (2–20 μm) contents are crucial as these size fractions impact key soil functions, and as pedotransfer concepts based on clay and silt contents are becoming increasingly abundant. We examined the effect of removing soil organic matter (SOM) by H2O2 before soil dispersion and determination of clay and silt. Soil samples with gradients in SOM were retrieved from three long-term field experiments each with uniform soil mineralogy and texture. For soils with less than 2 g C 100 g-1 minerals, clay estimates were little affected by SOM. Above this threshold, underestimation of clay increased dramatically with increasing SOM content. Silt contents were systematically overestimated when SOM was not removed; no lower SOM threshold was found for silt, but the overestimation was more pronounced for finer textured soils. When exact estimates of soil particles <20 μm are needed, SOM should always be removed before soil dispersion. PMID:28542416

  14. Soil texture analysis revisited: Removal of organic matter matters more than ever.

    PubMed

    Jensen, Johannes Lund; Schjønning, Per; Watts, Christopher W; Christensen, Bent T; Munkholm, Lars J

    2017-01-01

    Exact estimates of soil clay (<2 μm) and silt (2-20 μm) contents are crucial as these size fractions impact key soil functions, and as pedotransfer concepts based on clay and silt contents are becoming increasingly abundant. We examined the effect of removing soil organic matter (SOM) by H2O2 before soil dispersion and determination of clay and silt. Soil samples with gradients in SOM were retrieved from three long-term field experiments each with uniform soil mineralogy and texture. For soils with less than 2 g C 100 g-1 minerals, clay estimates were little affected by SOM. Above this threshold, underestimation of clay increased dramatically with increasing SOM content. Silt contents were systematically overestimated when SOM was not removed; no lower SOM threshold was found for silt, but the overestimation was more pronounced for finer textured soils. When exact estimates of soil particles <20 μm are needed, SOM should always be removed before soil dispersion.

  15. Soil organic matter as sole indicator of soil degradation.

    PubMed

    Obalum, S E; Chibuike, G U; Peth, S; Ouyang, Y

    2017-04-01

    Soil organic matter (SOM) is known to play vital roles in the maintenance and improvement of many soil properties and processes. These roles, which largely influence soil functions, are a pool of specific contributions of different components of SOM. The soil functions, in turn, normally define the level of soil degradation, viewed as quantifiable temporal changes in a soil that impairs its quality. This paper aims at providing a generalized assessment of the current state of knowledge on the usefulness of SOM in monitoring soil degradation, based on its influence on the physical, chemical and biological properties and processes of soils. Emphasis is placed particularly on the effect of SOM on soil structure and availability of plant nutrients. Although these properties are discussed separately, the soil system is of dynamic and interactive nature, and changes in one property will likely affect other soil properties as well. Thus, functions of SOM almost always affect various soil properties and processes and engage in multiple reactions. In view of its role in soil aggregation and erosion control, in availability of plant nutrients and in ameliorating other forms of soil degradation than erosion, SOM has proven to be an important indicator of soil degradation. It has been suggested, however, that rather than the absolute amount, temporal change and potential amount of SOM be considered in its use as indicator of soil degradation, and that SOM may not be an all-purpose indicator. Whilst SOM remains a candidate without substitute as long as a one-parameter indicator of soil degradation is needed, narrowing down to the use of its labile and microbial components could be more appropriate, since early detection is important in the control and management of soil degradation.

  16. Characteristics of DO, organic matter, and ammonium profile for practical scale DHS reactor under various organic load and temperature conditions.

    PubMed

    Nomoto, Naoki; Ali, Muntjeer; Jayaswal, Komal; Iguchi, Akinori; Hatamoto, Masashi; Okubo, Tsutomu; Takahashi, Masanobu; Kubota, Kengo; Tagawa, Tadashi; Uemura, Shigeki; Yamaguchi, Takashi; Harada, Hideki

    2017-04-07

    Profile analysis of the down-flow hanging sponge (DHS) reactor was conducted under various temperature and organic load conditions to understand the organic removal and nitrification process for sewage treatment . Under high organic load conditions (3.21~7.89 kg-COD m(-3) day(-1)), dissolved oxygen (DO) on the upper layer of the reactor was affected by organic matter concentration and water temperature and some time become around zero. Almost half of the CODCr was removed by the first layer, which could be attributed to the adsorption of organic matter on sponge media. After the first layer, organic removal proceeded along the first-order reaction equation from the second to the fourth layers. The ammonium nitrogen removal ratio decreased under high organic matter concentration (above 100 mg L(-1)) and low DO (less than 1 mg L(-1)) condition. Ammonium nitrogen removal proceeded via a zero-order reaction equation along the reactor height. In addition, profile results of DO, CODCr, and NH3-N were different in horizontal direction. Thus, it is thought the concentration of these item and microbial activities were not a uniform state even in the same sponge layer of the DHS reactor.

  17. Molecular characterization of soil organic matter: a historic overview

    NASA Astrophysics Data System (ADS)

    Kögel-Knabner, Ingrid; Rumpel, Cornelia

    2014-05-01

    The characterization of individual molecular components of soil organic matter started in the early 19th century, but proceeded slowly. The major focus at this time was on the isolation and differentiation of different humic and fulvic acid fractions, which were considered to have a defined chemical composition and structure. The isolation and structural anlysis of specific individual soil organic matter components became more popular in the early 20th century. In 1936 40 different individual compounds had been isolated and a specific chemical strucutre had been attributed. These structural attributions were confirmed later for some, but not all of these individual compounds. In the 1950 much more individual compounds could be isolated and characterized, using complicated and time consuming chromatography. It became obvious that soil also contains a number of compounds of microbial origin, such as e.g., amino sugars and lipids. With the improvement of chrmoatographic separation techniques and the use of gas chromatography in combination with thin layerchromatography in the 1960 hundreds of individual compounds have been isolated and identified, most of them after chemical degradation of humic or fulvic acids. The chemical degradative techniques were amended with analytical pyrolysis in the 1970s. More and more, bulk soil organic matter was analyzed with these techniques and the advent of solid-stae 13C NMR spectroscopy around the 1980s allowed for the characterization of the composition of bulk soil organic matter. The gas chromatographic separation of organic matter can nowadays be combined with specific detectors, such that specific attributes ofindividual molecules can be analyzed, e.g. the radiocarbon content or the stable isotope composition.

  18. Organic compounds in the particulate matter from burning organic soils

    Treesearch

    Charles K. McMahon; Jerry D. White; Skevos N. Tsoukalas

    1985-01-01

    This paper is directed to people interested in the environmental impact of natural emissions. Natural emissions are common and contribute significantly to tropospheric background levels. Several million hectares of the United States are covered by organic soils. During droughts, these soils can ignite and support slow combustion which often persists for weeks causing...

  19. Isotopic Equilibration Between Sulfide and Organic Matter: Implications for Records of Sedimentary δ34S.

    NASA Astrophysics Data System (ADS)

    Raven, M. R.; Sessions, A. L.; Adkins, J. F.; Fischer, W. W.

    2015-12-01

    Records of the sulfur-isotopic composition of sedimentary pyrite have been used to constrain the evolutionary timing of major metabolic pathways, the size of the marine sulfate reservoir, and the redox balance of the planet. It remains a major challenge, however, to explain the enormous range of pyrite δ34S values in the literature and their typical ~10‰ offset relative to sedimentary organic S. We investigate the development of pyrite and organic S records in Santa Barbara Basin, which has suboxic bottom water and high (≥4 wt%) organic matter burial. Concentration and δ34S profiles of major sulfur species (sulfate, sulfide, elemental S, proto-kerogen, pyrite, and extractable organic matter) suggest the occurrence of S-isotope exchange between porewater sulfide and organic S, so we conducted laboratory experiments to test organic S exchangeability with 34S-labelled sulfide-polysulfide solutions. We found that both extractable and proto-kerogen organic matter incorporated significant amounts of label within days, supporting the feasibility of equilibration between sulfide and organic matter in the environment. Unlike organic S, pyrite δ34S values in Santa Barbara Basin sediments are up to 30‰ lower than those for porewater sulfide. We hypothesize that this strongly 34S-depleted pyrite reflects the immediate products of bacterial sulfate reduction at organic-rich structures like microbial biofilms or aggregates and suggest that this δ34S difference between porewater sulfide and pyrite may be a more common than previously recognized. Pyrite δ34S values are not necessarily reflective of porewater sulfide δ34S, suggesting that this common assumption should be revisited. Sedimentary pyrite and organic S are potentially powerful and complementary archives of environmental information. To meaningfully interpret these records, it is essential that we take into account the complex processes affecting sedimentary pyrite and organic sulfur δ34S in modern sediments.

  20. Stabilization of ancient organic matter in deep buried paleosols

    NASA Astrophysics Data System (ADS)

    Marin-Spiotta, E.; Chaopricha, N. T.; Mueller, C.; Diefendorf, A. F.; Plante, A. F.; Grandy, S.; Mason, J. A.

    2012-12-01

    Buried soils representing ancient surface horizons can contain large organic carbon reservoirs that may interact with the atmosphere if exposed by erosion, road construction, or strip mining. Paleosols in long-term depositional sites provide a unique opportunity for studying the importance of different mechanisms on the persistence of organic matter (OM) over millennial time-scales. We report on the chemistry and bioavailability of OM stored in the Brady soil, a deeply buried (7 m) paleosol in loess deposits of southwestern Nebraska, USA. The Brady Soil developed 9,000-13,500 years ago during a time of warming and drying. The Brady soil represents a dark brown horizon enriched in C relative to loess immediately above and below. Spanning much of the central Great Plains, this buried soil contains large C stocks due to the thickness of its A horizon (0.5 to 1 m) and wide geographic extent. Our research provides a unique perspective on long-term OM stabilization in deep soils using multiple analytical approaches. Soils were collected from the Brady soil A horizon (at 7 m depth) and modern surface A horizons (0-15 cm) at two sites for comparison. Soils were separated by density fractionation using 1.85 g ml-1 sodium polytungstate into: free particulate organic matter (fPOM) and aggregate-occluded (oPOM) of two size classes (large: >20 μm, and small: < 20 μm). The remaining dense fraction was separated into sand, silt, and clay size fractions. The distribution and age of C among density and particle-size fractions differed between surface and Brady soils. We isolated the source of the characteristic dark coloring of the Brady soil to the oPOM-small fraction, which also contained 20% of the total organic C pool in the Brady soil. The oPOM-small fraction and the bulk soil in the middle of the Brady A horizon had 14C ages of 10,500-12,400 cal yr BP, within the time that the soil was actively forming at the land surface. Surface soils showed modern ages. Lipid analyses of

  1. Organic matter variations in transgressive and regressive shales

    USGS Publications Warehouse

    Pasley, M.A.; Gregory, W.A.; Hart, G.F.

    1991-01-01

    Organic matter in the Upper Cretaceous Mancos Shale adjacent to the Tocito Sandstone in the San Juan Basin of New Mexico was characterized using organic petrology and organic geochemistry. Differences in the organic matter found in these regressive and transgressive offshore marine sediments have been documented and assessed within a sequence stratigraphic framework. The regressive Lower Mancos Shale below the Tocito Sandstone contains abundant well preserved phytoclasts and correspondingly low hydrogen indices. Total organic carbon values for the regressive shale are low. Sediments from the transgressive systems tract (Tocito Sandstone and overlying Upper Mancos Shale) contain less terrestrially derived organic matter, more amorphous non-structured protistoclasts, higher hydrogen indices and more total organic carbon. Advanced stages of degradation are characteristic of the phytoclasts found in the transgressive shale. Amorphous material in the transgressive shale fluoresces strongly while that found in the regressive shale is typically non-fluorescent. Data from pyrolysis-gas chromatography confirm these observations. These differences are apparently related to the contrasting depositional styles that were active on the shelf during regression and subsequent transgression. It is suggested that data from organic petrology and organic geochemistry provide greater resolution in sedimentologic and stratigraphic interpretations, particularly when working with basinward, fine-grained sediments. Petroleum source potential for the regressive Lower Mancos Shale below the Tocito Sandstone is poor. Based on abundant fluorescent amorphous material, high hydrogen indices, and high total organic carbon, the transgressive Upper Mancos Shale above the Tocito Sandstone possesses excellent source potential. This suggests that appreciable source potential can be found in offshore, fine-grained sediments of the transgressive systems tract below the condensed section and associated

  2. Sustaining effect of soil warming on organic matter decomposition

    NASA Astrophysics Data System (ADS)

    Hou, Ruixing; Ouyang, Zhu; Dorodnikov, Maxim; Wilson, Glenn; Kuzyakov, Yakov

    2015-04-01

    Global warming affects various parts of carbon (C) cycle including acceleration of soil organic matter (SOM) decomposition with strong feedback to atmospheric CO2 concentration. Despite many soil warming studies showed changes of microbial community structure, only very few were focused on sustainability of soil warming on microbial activity associated with SOM decomposition. Two alternative hypotheses: 1) acclimation because of substrate exhaustion and 2) sustaining increase of microbial activity with accelerated decomposition of recalcitrant SOM pools were never proven under long term field conditions. This is especially important in the nowadays introduced no-till crop systems leading to redistribution of organic C at the soil surface, which is much susceptible to warming effects than the rest of the profile. We incubated soil samples from a four-year warming experiment with tillage (T) and no-tillage (NT) practices under three temperatures: 15, 21, and 27 °C, and related the evolved total CO2 efflux to changes of organic C pools. Warmed soils released significantly more CO2 than the control treatment (no warming) at each incubation temperature, and the largest differences were observed under 15 °C (26% increase). The difference in CO2 efflux from NT to T increase with temperature showing high vulnerability of C stored in NT to soil warming. The Q10 value reflecting the sensitivity of SOM decomposition to warming was lower for warmed than non-warmed soil indicating better acclimation of microbes or lower C availability during long term warming. The activity of three extracellular enzymes: β-glucosidase, chitinase, sulphatase, reflecting the response of C, N and S cycles to warming, were significantly higher under warming and especially under NT compared to two other respective treatments. The CO2 released during 2 months of incubation consisted of 85% from recalcitrant SOM and the remaining 15% from microbial biomass and extractable organic C based on the

  3. Preservation of organic matter on Mars by sulfur

    NASA Astrophysics Data System (ADS)

    Eigenbrode, J. L.; Steele, A.; Summons, R. E.; McAdam, A.; Sutter, B.; Franz, H. B.; Freissinet, C.; Millan, M.; Glavin, D. P.; Szopa, C.; Conrad, P. G.; Mahaffy, P. R.

    2016-12-01

    Deltaic-lacustrine mudstones at Pahrump Hills, Gale Crater, Mars yielded a variety of sulfur-containing volatiles upon heating to 500-860°C, as detected by the Sample Analysis at Mars (SAM) instrument onboard the Curiosity rover. The detection of organosulfur compounds comprising thiophenes, dimethylsulfide and thiols by gas chromatography-mass spectrometry and evolved gas analyses, together with aromatic and other hydrocarbon molecules with distributions specific to the sample (i.e., not from the SAM background) indicate that some or all of these organic fragments released at high temperatures are indigenous to the mudstones. The organosulfur compounds are most likely derived from sulfur organics in the sediments. However, there is a possibility that sulfurization of some organic fragments occurred in the oven. On Earth, sulfurization of organic matter is a key process that aids preservation over geological time-scales. This is because it reduces reactive functional groups and adds cross links between small unstable molecules thereby converting them into recalcitrant macromolecules. Sulfurization of organic materials prior to deposition and during early diagenesis may have been a key mechanism responsible for organic matter preservation in the Murray formation mudstones. Sulfur-bearing organics have also been observed in carbonaceous meteorites and there is indication of their presence in the Tissint martian meteorite. A quantitative assessment of organosulfur compounds relative to their non-organic counterparts will be presented for the Murray formation mudstones analyzed by SAM and meteorites analyzed in the laboratory under similar analytical conditions.

  4. Production of fluorescent dissolved organic matter in Arctic Ocean sediments

    PubMed Central

    Chen, Meilian; Kim, Ji-Hoon; Nam, Seung-Il; Niessen, Frank; Hong, Wei-Li; Kang, Moo-Hee; Hur, Jin

    2016-01-01

    Little is known about the production of fluorescent dissolved organic matter (FDOM) in the anoxic oceanic sediments. In this study, sediment pore waters were sampled from four different sites in the Chukchi-East Siberian Seas area to examine the bulk dissolved organic carbon (DOC) and their optical properties. The production of FDOM, coupled with the increase of nutrients, was observed above the sulfate-methane-transition-zone (SMTZ). The presence of FDOM was concurrent with sulfate reduction and increased alkalinity (R2 > 0.96, p < 0.0001), suggesting a link to organic matter degradation. This inference was supported by the positive correlation (R2 > 0.95, p < 0.0001) between the net production of FDOM and the modeled degradation rates of particulate organic carbon sulfate reduction. The production of FDOM was more pronounced in a shallow shelf site S1 with a total net production ranging from 17.9 to 62.3 RU for different FDOM components above the SMTZ depth of ca. 4.1 mbsf, which presumably underwent more accumulation of particulate organic matter than the other three deeper sites. The sediments were generally found to be the sources of CDOM and FDOM to the overlying water column, unearthing a channel of generally bio-refractory and pre-aged DOM to the oceans. PMID:27982085

  5. Production of fluorescent dissolved organic matter in Arctic Ocean sediments.

    PubMed

    Chen, Meilian; Kim, Ji-Hoon; Nam, Seung-Il; Niessen, Frank; Hong, Wei-Li; Kang, Moo-Hee; Hur, Jin

    2016-12-16

    Little is known about the production of fluorescent dissolved organic matter (FDOM) in the anoxic oceanic sediments. In this study, sediment pore waters were sampled from four different sites in the Chukchi-East Siberian Seas area to examine the bulk dissolved organic carbon (DOC) and their optical properties. The production of FDOM, coupled with the increase of nutrients, was observed above the sulfate-methane-transition-zone (SMTZ). The presence of FDOM was concurrent with sulfate reduction and increased alkalinity (R(2) > 0.96, p < 0.0001), suggesting a link to organic matter degradation. This inference was supported by the positive correlation (R(2) > 0.95, p < 0.0001) between the net production of FDOM and the modeled degradation rates of particulate organic carbon sulfate reduction. The production of FDOM was more pronounced in a shallow shelf site S1 with a total net production ranging from 17.9 to 62.3 RU for different FDOM components above the SMTZ depth of ca. 4.1 mbsf, which presumably underwent more accumulation of particulate organic matter than the other three deeper sites. The sediments were generally found to be the sources of CDOM and FDOM to the overlying water column, unearthing a channel of generally bio-refractory and pre-aged DOM to the oceans.

  6. Production of fluorescent dissolved organic matter in Arctic Ocean sediments

    NASA Astrophysics Data System (ADS)

    Chen, Meilian; Kim, Ji-Hoon; Nam, Seung-Il; Niessen, Frank; Hong, Wei-Li; Kang, Moo-Hee; Hur, Jin

    2016-12-01

    Little is known about the production of fluorescent dissolved organic matter (FDOM) in the anoxic oceanic sediments. In this study, sediment pore waters were sampled from four different sites in the Chukchi-East Siberian Seas area to examine the bulk dissolved organic carbon (DOC) and their optical properties. The production of FDOM, coupled with the increase of nutrients, was observed above the sulfate-methane-transition-zone (SMTZ). The presence of FDOM was concurrent with sulfate reduction and increased alkalinity (R2 > 0.96, p < 0.0001), suggesting a link to organic matter degradation. This inference was supported by the positive correlation (R2 > 0.95, p < 0.0001) between the net production of FDOM and the modeled degradation rates of particulate organic carbon sulfate reduction. The production of FDOM was more pronounced in a shallow shelf site S1 with a total net production ranging from 17.9 to 62.3 RU for different FDOM components above the SMTZ depth of ca. 4.1 mbsf, which presumably underwent more accumulation of particulate organic matter than the other three deeper sites. The sediments were generally found to be the sources of CDOM and FDOM to the overlying water column, unearthing a channel of generally bio-refractory and pre-aged DOM to the oceans.

  7. Natural organic matter properties in Swedish agricultural streams

    NASA Astrophysics Data System (ADS)

    Bieroza, Magdalena; Kyllmar, Katarina; Bergström, Lars; Köhler, Stephan

    2017-04-01

    The following paper shows natural organic matter (NOM) properties of stream water samples collected from 8 agricultural streams and 12 agricultural observational fields in Sweden. The catchments and observational fields cover a broad range of environmental (climate, soil type), land use and water quality (nutrient and concentrations, pH, alkalinity) characteristics. Stream water samples collected every two weeks within an ongoing Swedish Monitoring Programme for Agriculture have been analysed for total/dissolved organic carbon, absorbance and fluorescence spectroscopy. A number of quantitative and qualitative spectroscopic parameters was calculated to help to distinguish between terrestrially-derived, refractory organic material and autochthonous, labile material indicative of biogeochemical transformations of terrestrial NOM and recent biological production. The study provides insights into organic matter properties and carbon budgets in agricultural streams and improves understanding of how agricultural catchments transform natural and anthropogenic fluxes of organic matter and nutrients. The insights from the grab sampling are supported by high-frequency turbidity, fulvic-like and tryptophan-like fluorescence measurements with in situ optical sensor.

  8. Cumulative effects of biochar, mineral and organic fertilizers on soil organic matter

    NASA Astrophysics Data System (ADS)

    Plaza, César; López-de-Sá, Esther G.; Gascó, Gabriel; Méndez, Ana; Zaccone, Claudio

    2016-04-01

    We investigated the effect of three consecutive annual applications of biochar at rates of 0 and 20 t ha-1, in a factorial combination with a mineral fertilizer (NPK and nitrosulfate) and two types of organic amendment (municipal solid waste compost and sewage sludge), on soil organic matter in a field experiment under Mediterranean conditions. Biochar increased significantly soil organic C content and C/N ratio. In biochar-amended soils, soil organic C increased significantly with the addition of municipal solid waste compost and sewage sludge. To capture organic matter protection mechanisms related to aggregation and mineral interaction, the soil samples will be fractionated into free (unprotected), intra-macroaggregate, intra-microaggregate, and mineral-associated organic matter pools, and the isolated fractions will be subjected to further chemical and spectroscopic analysis.

  9. Pre-biotic organic matter from comets and asteroids

    NASA Technical Reports Server (NTRS)

    Anders, Edward

    1989-01-01

    Only meteoritic fragments small enough to be gently decelerated by the atmosphere (10 to the -12th g to 10 to the -6th g) can deliver organic matter intact. The amount of such 'soft-landed' organic carbon can be estimated from data for the infall rate of meteoritic matter. At present rates, only about 0.0006 g/sq cm intact organic carbon would accumulate in 100 million years, but at the higher rates of about four billion yr ago, about 20 g/sq cm may have accumulated in the few hundred million years between the last cataclysmic impact and the beginning of life. It may have included some biologically important compounds that did not form by abiotic synthesis on earth.

  10. Bacterial biomarkers thermally released from dissolved organic matter

    USGS Publications Warehouse

    Greenwood, P.F.; Leenheer, J.A.; McIntyre, C.; Berwick, L.; Franzmann, P.D.

    2006-01-01

    Hopane biomarker products were detected using microscale sealed vessel (MSSV) pyrolysis gas chromatography-mass spectrometry (GC-MS) analysis of dissolved organic matter from natural aquatic systems colonised by bacterial populations. MSSV pyrolysis can reduce the polyhydroxylated alkyl side chain of bacteriohopanepolyols, yielding saturated hopane products which are more amenable to GC-MS detection than their functionalised precursors. This example demonstrates how the thermal conditions of MSSV pyrolysis can reduce the biologically-inherited structural functionality of naturally occurring organic matter such that additional structural fragments can be detected using GC methods. This approach complements traditional analytical pyrolysis methods by providing additional speciation information useful for establishing the structures and source inputs of recent or extant organic material. ?? 2006.

  11. Pre-biotic organic matter from comets and asteroids

    NASA Technical Reports Server (NTRS)

    Anders, Edward

    1989-01-01

    Only meteoritic fragments small enough to be gently decelerated by the atmosphere (10 to the -12th g to 10 to the -6th g) can deliver organic matter intact. The amount of such 'soft-landed' organic carbon can be estimated from data for the infall rate of meteoritic matter. At present rates, only about 0.0006 g/sq cm intact organic carbon would accumulate in 100 million years, but at the higher rates of about four billion yr ago, about 20 g/sq cm may have accumulated in the few hundred million years between the last cataclysmic impact and the beginning of life. It may have included some biologically important compounds that did not form by abiotic synthesis on earth.

  12. Soil Organic Matter Content Effects on Dermal Pesticide ...

    EPA Pesticide Factsheets

    Agricultural landscapes serve as active amphibian breeding grounds despite their seemingly poor habitat value. Activity of adults and dispersal of metamorphs to and from agricultural ponds occurs in most species from spring through late summer or early fall, a time that coincides with pesticide applications on farm fields and crops. In terrestrial landscapes, dermal contact with contaminated soil and plant matter may lead to bioconcentration as well as lethal and sublethal effects in amphibians.Although the physiological structure of the amphibian dermis may facilitate pesticide uptake, soil properties may ultimately dictate bioavailability of pesticides in terrestrial habitats. The organic matter fraction of soil readily binds to pesticides, potentially decreasing the availability of pesticides adhering to biological matter. Soil partition coefficient organic carbon content and soil-specific Koc values may be important to indicating pesticide bioavailability and potential bioconcentration in amphibians. Our study was designed to evaluate dermal uptake of five pesticide active ingredients on either high or low organic matter soils. We predicted that amphibian body burdens would be a function of soil carbon content or Koc. with greater bioconcentration in individuals exposed to pesticides on sa

  13. Mobilization of stable organic carbon in thawing permafrost by fresh organic matter from recent vegetation

    NASA Astrophysics Data System (ADS)

    Knoblauch, C.; Beer, C.; Pfeiffer, E. M.

    2015-12-01

    Permafrost affected soils contain 1,300 Pg organic carbon which is about twice the amount of the global vegetation. Most of this carbon (C) is locked in the perennially frozen ground (permafrost) and only a minor part is stored in the seasonal surface thaw layer (active layer). Rising arctic temperatures will cause deeper active layer thaw and permafrost degradation, which liberates additional soil organic matter (SOM) for microbial mineralization. After thaw, old permafrost C will be mixed with fresh organic matter from plant residues, e.g. by cryoturbation or leaching. Recent incubation studies have increased our understanding on how fast permafrost SOM may be mineralized to the greenhouse gases (GHG) carbon dioxide (CO2) and methane (CH4). After initial maximum GHG production from labile SOM components (labile C pool) mineralization rates slow down since the remaining SOM is more recalcitrant (stable C pool). The current study investigates if this stabile C pool may be mobilized by fresh organic matter from recent vegetation ("priming effect"). Therefore, permafrost samples (14C ages 0.1 - 17 ka BP) from the Siberian tundra were spiked with a 13C-labeled sedge (Carex aquatilis) after the samples were pre-incubated for 4 years. The amount of C released from permafrost SOM was calculated from the δ13C-values of produced GHG using a mixing model. Under aerobic conditions, all samples showed an accelerated mineralization of SOM after the addition of C. aquatilis (positive priming). After 4 months, which is about one vegetation period, the measured CO2 production exceeded the estimated CO2 release without labile plant material by 60 ± 28%. Under anaerobic conditions, priming was more pronounced increasing CO2 production by 100 ± 67% and CH4 production by 33 ± 32%. The CO2/CH4 ratio increased from 0.9 before priming to 1.3 after priming. The total mineralization of SOM over 4 months was significantly higher under aerobic (14.2 ± 6.1 μmol CO2-C gdw-1) than under

  14. Affective Assemblages: Body Matters in the Pedagogic Practices of Contemporary School Classrooms

    ERIC Educational Resources Information Center

    Mulcahy, Dianne

    2012-01-01

    Set within the affective turn in cultural and social theory, in this paper, I explore the significance of materiality and matter, most specifically, bodily matter, in the pedagogic practices of contemporary school classrooms. The received view in education is that affect is tantamount to emotion or feeling and that materials, such as bodily…

  15. Affective Assemblages: Body Matters in the Pedagogic Practices of Contemporary School Classrooms

    ERIC Educational Resources Information Center

    Mulcahy, Dianne

    2012-01-01

    Set within the affective turn in cultural and social theory, in this paper, I explore the significance of materiality and matter, most specifically, bodily matter, in the pedagogic practices of contemporary school classrooms. The received view in education is that affect is tantamount to emotion or feeling and that materials, such as bodily…

  16. Do affective attitudes predict organ donor registration? A prospective study.

    PubMed

    Shepherd, Lee; O'Carroll, Ronan E

    2014-10-01

    This study assessed whether people's affective attitudes predicted organ donor registration at a later time. People who were not registered as an organ donor prior to completing the study (N = 150) first rated their affective attitudes towards organ donation. We then measured whether they clicked on a hyperlink to register as an organ donor. Believing that the body should be kept whole for burial (bodily integrity) was the only affective attitude to predict this organ donation behaviour. Future campaigns should target this concern in order to increase organ donor registration and the availability of donor organs.

  17. pH-Dependent sorption of acidic organic chemicals to soil organic matter.

    PubMed

    Tülp, Holger C; Fenner, Kathrin; Schwarzenbach, René P; Goss, Kai-Uwe

    2009-12-15

    Due to their increased polarity, many contemporary biologically active chemicals exhibit acid functions and may thus dissociate to their anionic conjugated base at pH values typically present in the environment. Despite its negative charge, soil organic matter (SOM) has been demonstrated to be the main sorbent in soils, even for the anionic species of organic acids. Nevertheless, few data exist that allow for a systematic interpretation of the sorption of organic acids into SOM. Therefore, in this study, the sorption of the neutral and anionic species of 32 diverse organic acids belonging to nine different chemical groups to SOM was investigated. Partition coefficients were determined from HPLC retention volumes on a column packed with peat, at three Ca(2+)-concentrations and over a pH range of 4.5-7.5. The influence of Ca(2+)-concentrations on anion sorption was small (factor 2 in the usual environmental Ca(2+)-concentration range) and independent of molecular structure. Generally, the organic carbon-water partition coefficients, K(oc), of both the neutral and anionic species increased with increasing molecular size and decreased with increasing polarity. At an environmentally relevant Ca(2+)-concentration of 10 mM, the investigated anions sorbed between a factor of 7-60 less than the corresponding neutral acid. This factor was more homogeneous within a group of structurally related compounds. These results indicate that while similar nonionic interactions seem to govern the partitioning of both the neutral and anionic species into SOM, the electrostatic interactions of the anionic species with SOM are a complex and currently not well understood function of the type of acidic functional group. The HPLC-based, flow through method presented in this study was shown to yield consistent results for a wide range of organic acids in a high-throughput manner. It should therefore prove highly useful in further investigating how different acidic functional groups affect

  18. Production and stabilization of dissolved organic matter throughout the entire soil profile

    NASA Astrophysics Data System (ADS)

    Kalbitz, Karsten; Kaiser, Klaus

    2010-05-01

    Dissolved organic matter (DOM) is the most mobile and rapidly cycling organic fraction in soil, affecting biogeochemical processes and linking terrestrial and aquatic ecosystems. Although representing just a small portion of total organic, it seems to be a key player in processes ultimately resulting in stabilization of organic matter against microbial decay. Recent studies have pointed out that up to 90% of the organic C in the mineral soil could derive from DOM. Most studies assume DOM to derive from surface horizons having large contents of organic matter such as peats, forest floor layers and mineral topsoils. Once biologically produced or physico-chemically released, DOM is transported into the subsoils characterized by smaller contents of organic matter. Here, DOM is retained by adsorption and/or (co)precipitation, resulting in stabilization against microbial decay. This concept assumes, DOM exported to the hydrosphere is that portion of DOM either not respired or not stabilized within the mineral soil. We think that this conceptual model is oversimplified and not made up to explain all aspects of organic matter transport and stabilization in soils. All organic matter in soil derives from primary production, entering the soil as leaves, roots and root exudates. The biological decomposition of the primary sources will provide a large variety of compounds of differing reactivity, solubility and stability, with microbial metabolites representing a prominent part of the stable fraction. Microbial decomposition will not ultimately convert all organic material into CO2 but render a certain portion soluble. Also, DOM seems capable to replace sorbed organic matter, thus allowing also for retention in parts of the mineral soil with large contents of organic matter. Therefore, we think that throughout the entire soil profile, production and release of DOM is possible, as well as retention and stabilization. In organic-rich horizons, especially those close or at the

  19. Enhanced turnover of organic matter fractions by microbial stimulation during lignocellulosic waste composting.

    PubMed

    Jurado, M M; Suárez-Estrella, F; López, M J; Vargas-García, M C; López-González, J A; Moreno, J

    2015-06-01

    Enhanced organic matter turnover was detected in lignocellulosic composting piles inoculated with microorganisms specifically capable of decomposing polymeric compounds. In comparison to uninoculated piles, the following results were obtained in the inoculated piles: degradation of hemicellulose, cellulose and lignin were 28%, 21% and 25% respectively higher. Total organic matter, total sugars and phenolic compounds also decreased more intensely. Greater amounts of soluble organic carbon, reducing sugars and soluble proteins were available to the composting microbiota. Recycling of organic to inorganic nitrogen was improved and humification was more intense and earlier attained. Microbial community structure was also affected by inoculation. It was initially thought that these effects were due to enzymatic capabilities of inoculants, however, microbial counts, especially those corresponding to functional groups, revealed that inoculation induced a true stimulation of microbial growth and activity in the entire composting microbiota which was actually responsible for all the beneficial effects reported here.

  20. Impact of wastewater treatment processes on organic carbon, organic nitrogen, and DBP precursors in effuent organic matter.

    PubMed

    Krasner, Stuart W; Westerhoff, Paul; Chen, Baiyang; Rittmann, Bruce E; Nam, Seong-Nam; Amy, Gary

    2009-04-15

    Unintentional, indirect wastewater reuse often occurs as wastewater treatment plant (WWTP) discharges contaminate receiving waters serving as drinking-water supplies. A survey was conducted at 23 WWTPs that utilized a range of treatment technologies. Samples were analyzed for typical wastewater and drinking-water constituents, chemical characteristics of the dissolved organic matter (DOM), and disinfection byproduct (DBP) precursors present in the effluent organic matter (EfOM). This was the first large-scale assessment of the critical water quality parameters that affect the formation of potential carcinogens during drinking water treatment relative to the discharge of upstream WWTPs. This study considered a large and wide range of variables, including emerging contaminants rarely studied at WWTPs and never before in one study. This paper emphasizesthe profound impact of nitrification on many measures of effluent water quality, from the obvious wastewater parameters (e.g., ammonia, biochemical oxygen demand) to the ones specific to downstream drinking water treatment plants (e.g., formation potentialsfor a diverse group of DBPs of health concern). Complete nitrification reduced the concentration of biodegradable dissolved organic carbon (BDOC) and changed the ratio of BDOC/DOC. Although nitrification reduced ultraviolet absorbance (UVA) at 254 nm, it resulted in an increase in specific UVA (UVA/DOC). This is attributed to preferential removal of the less UV-absorbing (nonhumic) fraction of the DOC during biological treatment. EfOM is composed of hydrophilic and biodegradable DOM, as well as hydrophobic and recalcitrant DOM, whose proportions change with advanced biological treatment. The onset of nitrification yielded lower precursor levels for haloacetic acids and nitrogenous DBPs (haloacetonitriles, N-nitrosodimethylamine). However, trihalomethane precursors were relatively unaffected by the level of wastewater treatment Thus, one design/operations parameter in

  1. A comparison of soil organic matter physical fractionation methods

    NASA Astrophysics Data System (ADS)

    Duddigan, Sarah; Alexander, Paul; Shaw, Liz; Collins, Chris

    2017-04-01

    Selecting a suitable physical fractionation to investigate soil organic matter dynamics from the plethora that are available is a difficult task. An initial investigation of four different physical fractionation methods was conducted (i) Six et al. (2002); (ii) Zimmermann et al. (2007); (iii) Sohi et al. (2001); and (iv) Plaza et al. (2013). Soils used for this were from a long-term organic matter field plot study where a sandy loam soil was subjected to the following treatments: Peat (Pt), Horse Manure (H), Garden Compost (GCf), Garden Compost at half rate (GCh), and a bare plot control (BP). Although each of these methods involved the isolation of unique fractions, in the interest of comparison, each fraction was categorised as either being (i) physically protected (i.e. in aggregates); (ii) chemically protected (such as in organo-mineral complexes); or (iii) unprotected by either of these mechanisms (so-called 'free' organic matter). Regardless of the fractionation method used, a large amount of the variation in total C contents of the different treated soils is accounted for by the differences in unprotected particulate organic matter. When comparing the methods to one another there were no consistent differences in carbon content in the physically protected, chemically protected, or unprotected fractions as operationally defined across all the five organic matter treatments. Therefore fractionation method selection, for this research, was primarily driven by the practicalities of conducting each method in the lab. All of the methods tested had their limitations, for use in this research. This is not a criticism of the methods themselves but largely a result of the lack of suitability for these particular samples. For example, samples that contain a lot of gravel can lead to problems for methods that use size distribution for fractionation. Problems can also be encountered when free particulate organic matter contributes a large proportion of the sample

  2. Loss of organic matter from riverine particles in deltas

    SciTech Connect

    Keil, R.G.; Quay, P.D.; Richey, J.E.

    1997-04-01

    In order to examine the transport and burial of terrigenous organic matter along the coastal zones of large river systems, we assessed organic matter dynamics in coupled river/delta systems using mineral surface area as a conservative tracer for discharged riverine particulate organic matter (POM). Most POM in the rivers studied (n = 6) is tightly associated with suspended mineral materiaL e.g., it is sorbed to mineral surfaces. Average organic loadings in the Amazon River (0.67 - 0.14 Mg C m{sup -2}), the river for which we have the largest dataset, are approximately twice that of sedimentary minerals from the Amazon Delta (-0.35 mg C m{sup -2}). Stable carbon isotope analysis indicate that approximately two-thirds of the total carbon on the deltaic particles is terrestrial. The combined surface-normalized, isotope-distinguished estimate is that >70% of the Amazon fluvial POM is not buried in the delta consistent with other independent evidence. Losses of terrestrial POM have also been quantified for the river/delta systems of Columbia in the USA, Fly in New Guinea. and Huange-He in China. If the losses of riverine POM observed in these river/delta systems are representative of rivers worldwide, then the surface-constrained analyses point toward a global loss of fluvial POM in delta regions of {approximately}0.1 x 10{sup 15} g C y{sup -1}. 28 refs., 2 figs., 1 tab.

  3. Bulk Soil Organic Matter d2H as a Precipitation Proxy

    NASA Astrophysics Data System (ADS)

    Williams, E. K.; Terwilliger, V. J.; Nakamoto, B. J.; Berhe, A. A.; Fogel, M. L.

    2016-12-01

    The stable hydrogen isotopic composition (d2H) of leaf waxes have traditionally been used to infer modern and paleoclimate precipitation sources. However, the extent to which evapotranspiration of leaf waters affects the d2H of plant leaf waxes remains hotly contested with offsets varying between species. Because of the relative importance of root organic matter contribution to bulk soil pools compared to litter/leaves and the minimal fractionation between soil water and root material, it is plausible that bulk soil organic matter d2H may be an option for modern and paleoclimate precipitation reconstructions. In this study, we analyzed the non-exchangeable d2H composition of roots, litter, leaves, and bulk soils along an elevation gradient in the southern Sierra Nevada range (USA). Our results show a consistent offset of 30 ± 3‰ in bulk soil organic matter in surface soils from the measured precipitation. This consistent relationship with precipitation was not found in any of the other organic materials that we measured and implies that d2H bulk soil organic matter can record precipitation signals regardless of above-ground species composition. Additionally, we utilized physical density fractionation to determine which fractions (which vary in level of mineral association and in turnover time) of the soil control this relationship. These findings and how this relationship holds with depth will be presented in conjunction with data from a soil profile on the Ethiopian plateau spanning 6000 years.

  4. Preservation of organic matter in sediments promoted by iron.

    PubMed

    Lalonde, Karine; Mucci, Alfonso; Ouellet, Alexandre; Gélinas, Yves

    2012-03-07

    The biogeochemical cycles of iron and organic carbon are strongly interlinked. In oceanic waters, organic ligands have been shown to control the concentration of dissolved iron. In soils, solid iron phases shelter and preserve organic carbon, but the role of iron in the preservation of organic matter in sediments has not been clearly established. Here we use an iron reduction method previously applied to soils to determine the amount of organic carbon associated with reactive iron phases in sediments of various mineralogies collected from a wide range of depositional environments. Our findings suggest that 21.5 ± 8.6 per cent of the organic carbon in sediments is directly bound to reactive iron phases. We further estimate that a global mass of (19-45) × 10(15) grams of organic carbon is preserved in surface marine sediments as a result of its association with iron. We propose that these associations between organic carbon and iron, which are formed primarily through co-precipitation and/or direct chelation, promote the preservation of organic carbon in sediments. Because reactive iron phases are metastable over geological timescales, we suggest that they serve as an efficient 'rusty sink' for organic carbon, acting as a key factor in the long-term storage of organic carbon and thus contributing to the global cycles of carbon, oxygen and sulphur.

  5. Rare earth elements and neodymium isotopes in sedimentary organic matter

    NASA Astrophysics Data System (ADS)

    Freslon, Nicolas; Bayon, Germain; Toucanne, Samuel; Bermell, Sylvain; Bollinger, Claire; Chéron, Sandrine; Etoubleau, Joel; Germain, Yoan; Khripounoff, Alexis; Ponzevera, Emmanuel; Rouget, Marie-Laure

    2014-09-01

    We report rare earth element (REE) and neodymium (Nd) isotope data for the organic fraction of sediments collected from various depositional environments, i.e. rivers (n = 25), estuaries (n = 18), open-ocean settings (n = 15), and cold seeps (n = 12). Sedimentary organic matter (SOM) was extracted using a mixed hydrogen peroxide/nitric acid solution (20%-H2O2-0.02 M-HNO3), after removal of carbonate and oxy-hydroxide phases with dilute hydrochloric acid (0.25 M-HCl). A series of experimental tests indicate that extraction of sedimentary organic compounds using H2O2 may be complicated occasionally by partial dissolution of sulphide minerals and residual carbonates. However, this contamination is expected to be minor for REE because measured concentrations in H2O2 leachates are about two-orders of magnitude higher than in the above mentioned phases. The mean REE concentrations determined in the H2O2 leachates for samples from rivers, estuaries, coastal seas and open-ocean settings yield relatively similar levels, with ΣREE = 109 ± 86 ppm (mean ± s; n = 58). The organic fractions leached from cold seep sediments display even higher concentration levels (285 ± 150 ppm; mean ± s; n = 12). The H2O2 leachates for most sediments exhibit remarkably similar shale-normalized REE patterns, all characterized by a mid-REE enrichment compared to the other REE. This suggests that the distribution of REE in leached sedimentary organic phases is controlled primarily by biogeochemical processes, rather than by the composition of the source from which they derive (e.g. pore, river or sea-water). The Nd isotopic compositions for organic phases leached from river sediments are very similar to those for the corresponding detrital fractions. In contrast, the SOM extracted from marine sediments display εNd values that typically range between the εNd signatures for terrestrial organic matter (inferred from the analysis of the sedimentary detrital fractions) and marine organic matter

  6. Changes in dissolved organic matter during stream drying and rewetting

    NASA Astrophysics Data System (ADS)

    von Schiller, D.; Acuña, V.; Graeber, D.; Martí, E.; Ribot, M.; Sabater, S.; Timoner, X.; Tockner, K.

    2012-04-01

    Dissolved organic matter (DOM) is a complex mixture of organic compounds, which represents an essential source of carbon (C) and nutrients in aquatic ecosystems. In addition, DOM can play a key ecological role by modifying the optical properties of waters, mediating the availability of metals and influencing trophic food web structure. While the effects of drying and rewetting on DOM dynamics in terrestrial soils is a well studied subject, less is known about its effects in aquatic ecosystems, especially in streams. This is an important gap of knowledge since temporary streams that naturally cease to flow are found worldwide. Moreover, many streams with perennial flow are currently facing flow intermittency due to the effects of water extraction or changes in land-use and climate. The aim of this study was to evaluate the effects of stream flow intermittency on the spatial and temporal variability of DOM. The study was performed in a 300-m long reach of the Fuirosos stream (Catalonia, NE Spain) during the drying (June to July) and rewetting (October to November) phases. We sampled at several points along the study reach every 3 to 4 days. We assessed DOM amount by measuring the concentration of dissolved organic C and nitrogen (N). We characterized DOM composition using spectroscopic measurements, size-exclusion chromatography and C:N stoichiometry. Results showed two markedly distinct biogeochemical shifts between the drying and the rewetting phases. During the transition from continuous to fragmented flow we observed an increase in the magnitude and spatial variability of DOM concentrations and DOM was dominated by compounds from aquatic origin. After flow recovery, we also observed a pronounced increase in DOM concentration, but during this hydrologic phase DOM was dominated by compounds of terrestrial origin. Taken together, these results emphasize the relevance of flow intermittency in regulating stream DOM dynamics not only in terms of its availability but

  7. Organic matter determination for street dust in Delhi.

    PubMed

    Shandilya, Kaushik K; Khare, Mukesh; Gupta, A B

    2013-06-01

    The organic matter of street dust is considered as one of the causes for high human mortality rate. To understand the association, the street dust samples were collected from four different localities (industrial, residential, residential-commercial, and commercial) situated in the greater Delhi area of India. The loss-on-ignition method was used to determine the organic matter (OM) content in street dust. The OM content, potassium, calcium, sulfate, and nitrate concentrations of street dust in Delhi, India is measured to understand the spatial variation. Correlation analysis, analysis of variance, and factor analysis were performed to define the sources. The dust OM level ranges from 2.63 to 10.22 %. It is found through correlation and factor analysis that OM is primarily contributed from secondary aerosol and vehicular exhaust. The OM levels suggest that the use of a residential-commercial site for commercial purposes is polluting the street dust and creating the environmental and human health problems.

  8. Photochemical Degradation of Persistent Organic Pollutants: A Study of Ice Photochemistry Mediated by Dissolved Organic Matter

    NASA Astrophysics Data System (ADS)

    Bobby, R.; Pagano, L.; Grannas, A. M.

    2012-12-01

    It is well established that ice is a reactive medium in the environment and that active photochemistry occurs in frozen systems. Snow and ice contain a number of absorbing species including nitrate, peroxide and organic matter. Upon irradiation, they can generate a variety of reactive intermediates such as hydroxyl radical and singlet oxygen. It has been shown that dissolved organic matter is a ubiquitous component of snow and ice and plays an important role in overall light absorption properties of the sample. Additionally, the reactive intermediates produced can further react with contaminants present and alter their fate in the environment. Unfortunately, the role of dissolved organic matter in ice photochemistry has received little attention. Here we present results from laboratory-based studies aimed at elucidating the role of dissolved organic matter photochemistry on contaminant degradation in ice. Aqueous samples of our target pollutant, aldrin (20 μg/L), in liquid and frozen phases, were irradiated under Q-Panel 340 lamps to simulate the UV radiation profile of natural sunlight. Results indicated that frozen samples degraded more quickly than liquid samples and that the addition of dissolved organic matter increases the aldrin degradation rate significantly. Both terrestrial (Suwannee River, U.S.) and microbial sources (Pony Lake, Antarctica) of DOM were able to sensitize aldrin loss in ice. Scavengers of singlet oxygen, such as furfuryl alcohol and β-carotene, were also added to DOM solutions. Based on the type of organic matter present, the scavengers had different effects on the photochemical degradation of aldrin. Our results indicate that natural organic matter present in ice is an important component of ice photochemical processes.

  9. Organic matter and benthic metabolism in Lake Illawarra, Australia

    NASA Astrophysics Data System (ADS)

    Qu, Wenchuan; Morrison, R. J.; West, R. J.; Su, Chenwei

    2006-10-01

    Carbon and nitrogen contents (total organic carbon and total nitrogen), chlorophyll-a concentrations in surface sediments and benthic sediment-water fluxes of oxygen and carbon dioxide were investigated at five stations in Lake Illawarra (Australia) to compare the sources/quality of sedimentary organic matter and the characteristics of diagenesis and benthic biogeochemical processes for different primary producers (e.g., seagrass, microphytobenthos and macroalgae) and/or sediment types (sand or mud). The unvegetated sediments showed lower C/N ratios (with the lowest value occurring in the deep organic-rich muddy site) than the seagrass ( Ruppia or Zostera) beds, which may be due to the contribution of microalgae (mainly diatoms) to the sedimentary organic matter pool. This was also supported by the detection of microalgal pigments in the bare sediments. On an annual basis, seagrass beds exhibited the highest gross primary productivity (O 2 or TCO 2 fluxes), while the lowest rates occurred in the deep central basin of the Lake. Seasonally, there was a general trend of highest production in spring or summer, and lowest production in winter or autumn. Organic carbon oxidation scenarios, evaluated by either calcium carbonate dissolution or sulfate reduction models, indicated that both models can explain organic matter mineralization. Trophic status was evaluated using different indices including benthic trophic state index, net O 2 fluxes and P/ R ratios for Lake Illawarra, which led to similar trophic classifications in general, and also the same trends in spatial and seasonal variations. Overall, these data indicated that the Lake was heterotrophic on an annual basis, as the total community carbon respiration exceeded production, and this supported an earlier LOICZ mass balance/stoichiometric modelling conclusion.

  10. Production of Dissolved Organic Matter During Doliolid Feeding

    NASA Astrophysics Data System (ADS)

    Castellane, N. J.; Paffenhofer, G. A.; Stubbins, A.

    2016-02-01

    The biological carbon pump (BCP) draws carbon dioxide out of the atmosphere and buries it at the seafloor. The efficiency of the BCP is determined in part by the sinking rates of particulate organic carbon (POC) from ocean surface waters. Zooplankton can package POC into fecal pellets with higher sinking rates than their food source (e.g. phytoplankton), increasing the efficiency of the BCP. However, dissolved organic carbon (DOC) is also produced as zooplankton ingest and egest food, reducing the efficiency of BCP. The pelagic tunicate Dolioletta gegenbauri (doliolid) is a gelatinous zooplankton found at high concentrations in shelf waters, including our study site: the South Atlantic Bight. Doliolids are efficient grazers capable of stripping large quantities of phytoplankton from the water column. To determine the balance between pellet formation and DOC production during feeding, doliolids (6-7 mm gonozooids) were placed in natural seawater amended with a live phytoplankton food source and incubated on a plankton wheel. Dissolved organic matter (DOM) released directly to the water as well as the water soluble fraction of pellet organic matter were quantified and optically characterized. Colored dissolved organic matter (CDOM) absorbance and fluorescence spectra revealed that doliolid feeding produces DOM with optical properties that are commonly indicative of newly produced, highly biolabile DOM of microbial origin. Based upon these optical characteristics, doliolid-produced DOM is expected to be highly bio-labile in the environment and therefore rapidly degraded by surface ocean microbes shunting phytoplankton-derived organic carbon out of the BCP and back to dissolved inorganic carbon.

  11. Temperature sensitivity of organic-matter decay in tidal marshes

    USGS Publications Warehouse

    Kirwan, Matthew L.; Guntenspergen, Glenn R.; Langley, J.A.

    2014-01-01

    Approximately half of marine carbon sequestration takes place in coastal wetlands, including tidal marshes, where organic matter contributes to soil elevation and ecosystem persistence in the face of sea-level rise. The long-term viability of marshes and their carbon pools depends, in part, on how the balance between productivity and decay responds to climate change. Here, we report the sensitivity of labile soil organic-matter decay in tidal marshes to seasonal and latitudinal variations in temperature measured over a 3-year period. We find a moderate increase in decay rate at warmer temperatures (3-6% per °C, Q10 = 1.3-1.5). Despite the profound differences between microbial metabolism in wetlands and uplands, our results indicate a strong conservation of temperature sensitivity. Moreover, simple comparisons with organic-matter production suggest that elevated atmospheric CO2 and warmer temperatures will accelerate carbon accumulation in marsh soils, and potentially enhance their ability to survive sea-level rise.

  12. Temperature sensitivity of organic-matter decay in tidal marshes

    NASA Astrophysics Data System (ADS)

    Kirwan, M. L.; Guntenspergen, G. R.; Langley, J. A.

    2014-09-01

    Approximately half of marine carbon sequestration takes place in coastal wetlands, including tidal marshes, where organic matter contributes to soil elevation and ecosystem persistence in the face of sea-level rise. The long-term viability of marshes and their carbon pools depends, in part, on how the balance between productivity and decay responds to climate change. Here, we report the sensitivity of labile soil organic-matter decay in tidal marshes to seasonal and latitudinal variations in temperature measured over a 3-year period. We find a moderate increase in decay rate at warmer temperatures (3-6% per °C, Q10 = 1.3-1.5). Despite the profound differences between microbial metabolism in wetlands and uplands, our results indicate a strong conservation of temperature sensitivity. Moreover, simple comparisons with organic-matter production suggest that elevated atmospheric CO2 and warmer temperatures will accelerate carbon accumulation in marsh soils, and potentially enhance their ability to survive sea-level rise.

  13. Terrestrial dominance of organic matter in north temperate lakes

    NASA Astrophysics Data System (ADS)

    Wilkinson, G.; Pace, M. L.; Cole, J. J.

    2012-12-01

    Aquatic ecosystems are hotspots of decomposition and a source of carbon dioxide to the atmosphere that is globally significant. Carbon exported from land (allochthonous) also supplements the carbon fixed by photosynthesis in aquatic ecosystems (autochthonous), contributing to the organic matter (OM) that supports aquatic consumers. Although the presence of terrestrial compounds in aquatic OM is well known, the contribution of terrestrial versus aquatic sources to the composition of OM has been quantified for only a handful of systems. Here we use stable isotopes of hydrogen and carbon to demonstrate that the terrestrial contribution to particulate organic matter (POM) is as large or larger (mean=54.6% terrestrial) than the algal contribution in 39 lakes of the northern highlands region of Wisconsin and Michigan. Further, the largest carbon pool, dissolved organic matter (DOM), is strongly dominated by allochthonous material (mean for the same set of lakes approximately 100% terrestrial). Among lakes, increases in terrestrial contribution to POM are significantly correlated with more acidic pH. Extrapolating this relationship using a survey of pH in 1692 lakes in the region reveals that, with the exception of eutrophic lakes, most of the OM in lakes is of terrestrial origin. These results are consistent with the growing evidence that terrestrial OM may support many lake food webs, and that lakes are significant conduits for returning degraded terrestrial carbon to the atmosphere.

  14. Terrestrial dominance of organic matter in north temperate lakes

    NASA Astrophysics Data System (ADS)

    Wilkinson, Grace M.; Pace, Michael L.; Cole, Jonathan J.

    2013-01-01

    Aquatic ecosystems are hotspots of decomposition and sources of carbon dioxide to the atmosphere that are globally significant. Carbon exported from land (allochthonous) also supplements the carbon fixed by photosynthesis in aquatic ecosystems (autochthonous), contributing to the organic matter (OM) that supports aquatic consumers. Although the presence of terrestrial compounds in aquatic OM is well known, the contribution of terrestrial versus aquatic sources to the composition of OM has been quantified for only a handful of systems. Here we use stable isotopes of hydrogen and carbon to demonstrate that the terrestrial contribution (ΦTerr) to particulate organic matter (POM) is as large or larger (mean = 54.6% terrestrial) than the algal contribution in 39 lakes of the northern highlands region of Wisconsin and Michigan. Further, the largest carbon pool, dissolved organic matter (DOM), is strongly dominated by allochthonous material (mean for the same set of lakes approximately 100% terrestrial). Among lakes, increases in terrestrial contribution to POM are significantly correlated with more acidic pH. Extrapolating this relationship using a survey of pH in 1692 lakes in the region reveals that, with the exception of eutrophic lakes, most of the OM in lakes is of terrestrial origin. These results are consistent with the growing evidence that lakes are significant conduits for returning degraded terrestrial carbon to the atmosphere.

  15. Matrix protected organic matter in a river dominated margin: A possible mechanism to sequester terrestrial organic matter?

    NASA Astrophysics Data System (ADS)

    Mead, Ralph N.; Goñi, Miguel A.

    2008-06-01

    The provenance of organic matter in surface sediments from the northern Gulf of Mexico was investigated by analyzing the compositions of lipid biomarkers ( n-alkanes, fatty acids, sterols) liberated after a series of chemical treatments designed to remove different organo-mineral matrix associations (i.e. freely extractable, base-hydrolyzable, unhydrolyzable). Bulk analyses of the organic matter (carbon content, carbon:nitrogen ratios, stable and radiocarbon isotopic analyses) were also performed on the intact sediments and their non-hydrolyzable, demineralized residue. We found recognizable lipids from distinct sources, including terrestrial vascular plants, bacteria and marine algae and zooplankton, within each of the isolated fractions. Based on the lipid signatures and bulk compositions, the organic matter within the unhydrolyzable fractions appeared to be the most diagenetically altered, was the oldest in age, and had the highest abundance of terrigenous lipids. In contrast, the base-hydrolyzable fraction was the most diagentically unaltered, had the youngest ages and was most enriched in N and marine lipids. Our results indicate that fresh, autochthonous organic matter is the most important contributor to base-hydrolyzable lipids, whereas highly altered allochthonous sources appear to be predominant source of unhydrolyzable lipids in the surface sediments from the Atchafalaya River shelf. Overall, the lipid biomarker signatures of intact sediments were biased towards the autochthonous source because many of the organic compounds indicative of degraded, terrigenous sources were protected from extraction and saponification by organo-mineral matrices. It is only after these protective matrices were removed by treatment with HCl and HF that these compounds became evident.

  16. The Impact of Microbial Metabolism on Marine Dissolved Organic Matter

    NASA Astrophysics Data System (ADS)

    Kujawinski, Elizabeth B.

    2011-01-01

    Microbes mediate global biogeochemical cycles through their metabolism, and all metabolic processes begin with the interaction between the microbial cell wall or membrane and the external environment. For all heterotrophs and many autotrophs, critical growth substrates and factors are present within the dilute and heterogeneous mixture of compounds that constitutes dissolved organic matter (DOM). In short, the microbe-molecule interaction is one of the fundamental reactions within the global carbon cycle. Here, I summarize recent findings from studies that examine DOM-microbe interactions from either the DOM perspective (organic geochemistry) or the microbe perspective (microbial ecology). Gaps in our knowledge are highlighted and future integrative research directions are proposed.

  17. Comments on D/H ratios in chondritic organic matter

    NASA Astrophysics Data System (ADS)

    Smith, J. W.; Rigby, D.

    1981-06-01

    D/H ratios in chondritic organic matter are investigated. Demineralized organic residues obtained from previous experiments were dried in a quartz reaction vessel under vacuum for 60 minutes at 250-300 C and then combusted in oxygen for 20 minutes at 850 C. The apparatus is described and the results of the experiments such as D/H ratios in water and measurements on total carbon dioxide are given. Atomic H/C ratios calculated directly from the quantities of carbon dioxide and water recovered, are reported according to Standard Mean Ocean Water and Pee Dee Belemnite, using the customary notation.

  18. Carbon isotopic studies of organic matter in Precambrian rocks.

    NASA Technical Reports Server (NTRS)

    Oehler, D. Z.; Schopf, J. W.; Kvenvolden, K. A.

    1972-01-01

    A survey has been undertaken of the carbon composition of the total organic fraction of a suite of Precambrian sediments to detect isotopic trends possibly correlative with early evolutionary events. Early Precambrian cherts of the Fig Tree and upper and middle Onverwacht groups of South Africa were examined for this purpose. Reduced carbon in these cherts was found to be isotopically similar to photosynthetically produced organic matter of younger geological age. Reduced carbon in lower Onverwacht cherts was found to be anomalously heavy; it is suggested that this discontinuity may reflect a major event in biological evolution.

  19. Organic matter in meteorites and comets - Possible origins

    NASA Astrophysics Data System (ADS)

    Anders, E.

    1991-04-01

    At least six extraterrestrial environments may have contributed organic compounds to meteorites and comets: solar nebula, giant-planet subnebulae, asteroid interiors containing liquid water, carbon star atmospheres, and diffuse or dark interstellar clouds. The record in meteorites is partly obscured by pervasive reheating that transformed much of the organic matter to kerogen; nonetheless, it seems that all six formation sites contributed. For comets, the large abundance of HCHO, HCN, and unsaturated hydrocarbons suggests an interstellar component of 50 percent or more, but the contributions of various interstellar processes, and of a solar-nebula component, are hard to quantify. A research program is outlined that may help reduce these uncertainties.

  20. Plutonium Immobilization and Mobilization by Soil Organic Matter

    SciTech Connect

    Santschi, Peter H.; Schwehr, Kathleen A.; Xu, Chen; Athon, Matthew; Ho, Yi-Fang; Hatcher, Patrick G.; Didonato, Nicole; Kaplan, Daniel I.

    2016-03-08

    The human and environmental risks associated with Pu disposal, remediation, and nuclear accidents scenarios stems mainly from the very long half-lives of several of its isotopes. The SRS, holding one-third of the nation’s Pu inventory, has a long-term stewardship commitment to investigation of Pu behavior in the groundwater and downgradient vast wetlands. Pu is believed to be essentially immobile due to its low solubility and high particle reactivity to mineral phase or natural organic matter (NOM). For example, in sediments collected from a region of SRS, close to a wetland and a groundwater plume, 239,240Pu concentrations suggest immobilization by NOM compounds, as Pu correlate with NOM contents. Micro-SXRF data indicate, however, that Pu does not correlate with Fe. However, previous studies reported Pu can be transported several kilometers in surface water systems, in the form of a colloidal organic matter carrier, through wind/water interactions. The role of NOM in both immobilizing or re-mobilizing Pu thus has been demonstrated. Our results indicate that more Pu (IV) than (V) was bound to soil colloidal organic matter (COM), amended at far-field concentrations. Contrary to expectations, the presence of NOM in the F-Area soil did not enhance Pu fixation to the organic-rich soil, when compared to the organic-poor soil or the mineral phase from the same soil source, due to the formation of COM-bound Pu. Most importantly, Pu uptake by organic-rich soil decreased with increasing pH because more NOM in the colloidal size desorbed from the particulate fraction at elevated pH, resulting in greater amounts of Pu associated with the COM fraction. This is in contrast to previous observations with low-NOM sediments or minerals, which showed increased Pu uptake with increasing pH levels. This demonstrates that despite Pu immobilization by NOM, COM can convert Pu into a more mobile form. Sediment Pu concentrations in the SRS F-Area wetland were correlated to total organic

  1. Organic matter in meteorites and comets - Possible origins

    NASA Technical Reports Server (NTRS)

    Anders, Edward

    1991-01-01

    At least six extraterrestrial environments may have contributed organic compounds to meteorites and comets: solar nebula, giant-planet subnebulae, asteroid interiors containing liquid water, carbon star atmospheres, and diffuse or dark interstellar clouds. The record in meteorites is partly obscured by pervasive reheating that transformed much of the organic matter to kerogen; nonetheless, it seems that all six formation sites contributed. For comets, the large abundance of HCHO, HCN, and unsaturated hydrocarbons suggests an interstellar component of 50 percent or more, but the contributions of various interstellar processes, and of a solar-nebula component, are hard to quantify. A research program is outlined that may help reduce these uncertainties.

  2. Water repellency and organic matter composition after a wildfire: new insights using thermal analysis

    NASA Astrophysics Data System (ADS)

    Neris, Jonay; Doerr, Stefan

    2014-05-01

    Water repellency, a key parameter in the hydrological and ecological behaviour of ecosystems, is one of the main soil properties affected by wildfire through its impact on organic matter (Shakesby and Doerr, 2006). This study examines the link between post-fire organic matter quantity and composition, soil water repellency and related hydrological properties in order to (i) examine the influence of different organic matter pools on soil hydrological properties and (ii) to explore the use of these links as a proxy for soil hydrological impacts of fire. Soil samples from five fire-affected burned and unburned control sites in Andisols terrain in Tenerife, previously studied for water repellency and hydrology-related properties (Neris et al., 2013), were selected and thermogravimetric analysis (TG) carried out to evaluate fire impacts on their organic matter composition. A decrease in the organic matter quantity as well as in the relative amount of the labile organic matter pool and an increase in the recalcitrant and/or refractory pool depending was observed in the burned soils. TG data, using 10 ºC temperature range steps, allowed reasonable prediction of soil properties evaluated, with R2 ranging from 0.4 to 0.8. The labile pool showed a broad and positive influence on most soil properties evaluated, whereas the refractory pool and the dehydration range affected the surface water holding capacity and water repellency. These results, in conjunction with the simplicity of the TG analysis suggest that, following a calibration step to link TG data to the site-specific post-fire soil properties, this method may be a useful tool for rapid and cost-effective soil hydrological response evaluation after the fire. References Neris, J., Tejedor, M., Fuentes, J., Jiménez, C., 2013. Infiltration, runoff and soil loss in Andisols affected by forest fire (Canary Islands, Spain). Hydrological Processes 27(19), 2814-2824. Shakesby, R.A., Doerr, S.H., 2006. Wildfire as a

  3. Role of organic matter on aggregate stability and related mechanisms through organic amendments

    NASA Astrophysics Data System (ADS)

    Zaher, Hafida

    2010-05-01

    To date, only a few studies have tried to simultaneously compare the role of neutral and uronic sugars and lipids on soil structural stability. Moreover, evidence for the mechanisms involved has often been established following wetting of moist aggregates after various pre-treatments thus altering aggregate structure and resulting in manipulations on altered aggregates on which the rapid wetting process may not be involved anymore. To the best of our knowledge, the objective of this work was to study the role of neutral and uronic sugars and lipids in affecting key mechanisms (swelling rate, pressure evolution) involved in the stabilization of soil structure. A long-term incubation study (48-wk) was performed on a clay loam and a silty-clay loam amended with de-inking-secondary sludge mix at three rates (8, 16 and 24 Mg dry matter ha-1), primary-secondary sludge mix at one rate (18 Mg oven-dry ha-1) and composted de-inking sludge at one rate (24 Mg ha-1). Different structural stability indices (stability of moist and dry aggregates, the amount of dispersible clay and loss of soil material following sudden wetting) were measured on a regular basis during the incubation, along with CO2 evolved, neutral and uronic sugar, and lipid contents. During the course of the incubations, significant increases in all stability indices were measured for both soil types. In general, the improvements in stability were proportional to the amount of C added as organic amendments. These improvements were linked to a very intense phase of C mineralization and associated with increases in neutral and uronic sugars as well as lipid contents. The statistical relationships found between the different carbonaceous fractions and stability indices were all highly significant and indicated no clear superiority of one fraction over another. Paper sludge amendments also resulted in significant decreases in maximum internal pressure of aggregate and aggregate swelling following immersion in water

  4. SOIL NITROGEN TRANSFORMATIONS AND ROLE OF LIGHT FRACTION ORGANIC MATTER IN FOREST SOILS

    EPA Science Inventory

    Depletion of soil organic matter through cultivation may alter substrate availability for microbes, altering the dynamic balance between nitrogen (N) immobilization and mineralization. Soil light fraction (LF) organic matter is an active pool that decreases upon cultivation, and...

  5. SOIL NITROGEN TRANSFORMATIONS AND ROLE OF LIGHT FRACTION ORGANIC MATTER IN FOREST SOILS

    EPA Science Inventory

    Depletion of soil organic matter through cultivation may alter substrate availability for microbes, altering the dynamic balance between nitrogen (N) immobilization and mineralization. Soil light fraction (LF) organic matter is an active pool that decreases upon cultivation, and...

  6. Atmospheric fluxes of organic matter to the Mediterranean Sea: contribution to the elemental C: N: P ratios of surface dissolved organic matter

    NASA Astrophysics Data System (ADS)

    Djaoudi, Kahina; Barani, Aude; Hélias-Nunige, Sandra; Van Wambeke, France; Pulido-Villena, Elvira

    2016-04-01

    It has become increasingly apparent that atmospheric transport plays an important role in the supply of macro- and micro-nutrients to the surface ocean. This atmospheric input is especially important in oligotrophic regions where the vertical supply from the subsurface is low particularly during the stratification period. Compared to its inorganic counterpart, the organic fraction of atmospheric deposition and its impact on surface ocean biogeochemistry has been poorly explored. In the ocean, carbon export to depth (and therefore, its long term storage with presumed consequences on climate) occurs both through particle sedimentation and through the transfer of dissolved organic matter (DOM) via diffusion or convection. DOM export from the surface ocean represents up to 50% of total organic carbon flux to the deep ocean in oligotrophic regions such as the Mediterranean Sea. The efficiency of this C export pathway depends, among others, on the elemental C: N: P ratios of surface DOM which might be affected by the relative contribution of microbial processes and allochthonous sources. This work reports a one-year time-series (April 2015-April 2016) of simultaneous measurements of (1) total (dry + wet) atmospheric fluxes of organic carbon, organic nitrogen, and organic phosphorus and (2) concentration of dissolved organic carbon, dissolved organic nitrogen, and dissolved organic phosphate at the surface layer (0-200 m) in the NW Mediterranean Sea. Atmospheric and oceanic surveys were conducted at the Frioul and ANTARES sites, respectively, operated by the long-term observation network MOOSE (Mediterranean Oceanic Observation System for the Environment).

  7. Performance of experimental horizontal subsurface flow constructed wetlands fed with dissolved or particulate organic matter.

    PubMed

    Caselles-Osorio, Aracelly; García, Joan

    2006-11-01

    In this study, the effect of the influent type of organic matter (dissolved or particulate) on the efficiency of two experimental horizontal subsurface flow constructed wetlands (SSF CWs) was investigated. The SSF CWs' surface area was 0.54 m(2) and the water depth was 0.3m. They were monitored for a period of 9 months. One of the SSF CWs was fed with dissolved organic matter (glucose, assumed to be readily biodegradable), and the other with particulate organic matter (starch, assumed to be slowly biodegradable). The removal efficiency of the systems was tested at different hydraulic retention times (HRTs) in the presence or absence of sulphate. The removal efficiency of the COD was not different in the two systems, reaching eliminations of around 85% in the presence of sulphates and around 95% in their absence. Ammonia N removal was low in the two SSF CWs; the system fed with glucose generally had statistically significant higher removal (45%) than the one fed with starch (40%). Ammonia N removal was more affected by the HRT than by the presence or absence of sulphates. Hydraulic conductivity measurements showed that it was lower near the inlet of the SFF CW fed with glucose, probably connected to the fact that there was a more substantial development of the biofilm. The results of this study suggest that SSF CWs are not sensitive to the type of organic matter in the influents, whether it is readily (like glucose) or slowly (like starch) biodegradable, for the removal of COD.

  8. A general framework for modelling the vertical organic matter profile in mineral and organic soils

    NASA Astrophysics Data System (ADS)

    Braakhekke, Maarten; Ahrens, Bernhard

    2016-04-01

    The vertical distribution of soil organic matter (SOM) within the mineral soil and surface organic layer is an important property of terrestrial ecosystems that affects carbon and nutrient cycling and soil heat and moisture transport. The overwhelming majority of models of SOM dynamics are zero-dimensional, i.e. they do not resolve heterogeneity of SOM concentration along the vertical profile. In recent years, however, a number of new vertically explicit SOM models or vertically explicit versions of existing models have been published. These models describe SOM in units of concentration (mass per unit volume) by means of a reactive-transport model that includes diffusion and/or advection terms for SOM transport, and vertically resolves SOM inputs and factors that influence decomposition. An important assumption behind these models is that the volume of soil elements is constant over time, i.e. not affected by SOM dynamics. This assumption only holds if the SOM content is negligible compared to the mineral content. When this is not the case, SOM input or loss in a soil element may cause a change in volume of the element rather than a change in SOM concentration. Furthermore, these volume changes can cause vertical shifts of material relative to the surface. This generally causes material in an organic layer to gradually move downward, even in absence of mixing processes. Since the classical reactive-transport model of the SOM profile can only be applied to the mineral soil, the surface organic layer is usually either treated separately or not explicitly considered. We present a new and elegant framework that treats the surface organic layer and mineral soil as one continuous whole. It explicitly accounts for volume changes due to SOM dynamics and changes in bulk density. The vertical shifts resulting from these volume changes are included in an Eulerian representation as an additional advective transport flux. Our approach offers a more elegant and realistic

  9. Iron traps terrestrially derived dissolved organic matter at redox interfaces.

    PubMed

    Riedel, Thomas; Zak, Dominik; Biester, Harald; Dittmar, Thorsten

    2013-06-18

    Reactive iron and organic carbon are intimately associated in soils and sediments. However, to date, the organic compounds involved are uncharacterized on the molecular level. At redox interfaces in peatlands, where the biogeochemical cycles of iron and dissolved organic matter (DOM) are coupled, this issue can readily be studied. We found that precipitation of iron hydroxides at the oxic surface layer of two rewetted fens removed a large fraction of DOM via coagulation. On aeration of anoxic fen pore waters, >90% of dissolved iron and 27 ± 7% (mean ± SD) of dissolved organic carbon were rapidly (within 24 h) removed. Using ultra-high-resolution MS, we show that vascular plant-derived aromatic and pyrogenic compounds were preferentially retained, whereas the majority of carboxyl-rich aliphatic acids remained in solution. We propose that redox interfaces, which are ubiquitous in marine and terrestrial settings, are selective yet intermediate barriers that limit the flux of land-derived DOM to oceanic waters.

  10. [Influence of Natural Dissolved Organic Matter on the Passive Sampling Technique and its Application].

    PubMed

    Yu, Shang-yun; Zhou, Yan-mei

    2015-08-01

    This paper studied the effects of different concentrations of natural dissolved organic matter (DOM) on the passive sampling technique. The results showed that the presence of DOM affected the organic pollutant adsorption ability of the membrane. For lgK(OW), 3-5, DOM had less impact on the adsorption of organic matter by the membrane; for lgK(OW), > 5.5, DOM significantly increased the adsorption capacity of the membrane. Meanwhile, LDPE passive sampling technique was applied to monitor PAHs and PAEs in pore water of three surface sediments in Taizi River. All of the target pollutants were detected in varying degrees at each sampling point. Finally, the quotient method was used to assess the ecological risks of PAHs and PAEs. The results showed that fluoranthene exceeded the reference value of the aquatic ecosystem, meaning there was a big ecological risk.

  11. Native soil organic matter conditions the response of microbial communities to organic inputs with different stability

    NASA Astrophysics Data System (ADS)

    Yanardaǧ, Ibrahim H.; Zornoza, Raúl; Bastida, Felipe; Büyükkiliç-Yanardaǧ, Asuman; Acosta, Jose A.; García, Carlos; Faz, Ángel; Mermut, Ahmet R.

    2017-04-01

    The response of soil microbial communities from soils with different soil organic matter (SOM) content to organic inputs with different stability is still poorly understood. Thus, an incubation experiment was designed to study how the addition of pig slurry (PS), its manure (M) and its biochar (BC) affect soil microbial community and activity in three soils differing in SOM content (Regosol, Luvisol and Kastanozem). The evolution of different C and N fractions, microbial biomass C and N, enzyme activities and microbial community structure by the use of phospholipid fatty acid (PLFA) analysis was assessed for 60 days. Results showed that the different amendments had different effect on microbial properties depending on the soil type. The addition of M caused the highest increase in all microbial properties in the three soils, followed by PS. These changes were more intense in the soil with the lowest SOM (Regosol). The addition of M and PS caused changes in the microbial community structure in all soils, which were more related to the presence of available sources of N than to the labile fractions of C. The addition of BC was followed by increases in the proportions of fungi and Gram positive bacteria in the Regosol, while enhanced the proportion of actinobacteria in all soil types, related to increments in pH and soil C recalcitrance. Thus, native SOM determined the response of microbial communities to external inputs with different stability, soils with low SOM being more prone to increase microbial biomass and activity and change microbial community structure.

  12. Carbon Mineralizability Determines Interactive Effects on Mineralization of Pyrogenic Organic Matter and Soil Organic Carbon

    SciTech Connect

    Whitman, Thea L.; Zhu, Zihua; Lehmann, Johannes C.

    2014-10-31

    Soil organic carbon (SOC) is a critical and active pool in the global C cycle, and the addition of pyrogenic organic matter (PyOM) has been shown to change SOC cycling, increasing or decreasing mineralization rates (often referred to as priming). We adjusted the amount of easily mineralizable C in the soil, through 1-day and 6-month pre-incubations, and in PyOM made from maple wood at 350°C, through extraction. We investigated the impact of these adjustments on C mineralization interactions, excluding pH and nutrient effects and minimizing physical effects. We found short-term increases (+20-30%) in SOC mineralization with PyOM additions in the soil pre-incubated for 6 months. Over the longer term, both the 6-month and 1-day pre-incubated soils experienced net ~10% decreases in SOC mineralization with PyOM additions. This was possibly due to stabilization of SOC on PyOM surfaces, suggested by nanoscale secondary ion mass spectrometry. Additionally, the duration of pre-incubation affected priming interactions, indicating that there may be no optimal pre-incubation time for SOC mineralization studies. We show conclusively that relative mineralizability of SOC in relation to PyOM-24 C is an important determinant of the effect of PyOM additions on SOC mineralization.

  13. Soil Quality of Restinga Forest: Organic Matter and Aluminum Saturation

    NASA Astrophysics Data System (ADS)

    Rodrigues Almeida Filho, Jasse; Casagrande, José Carlos; Martins Bonilha, Rodolfo; Soares, Marcio Roberto; Silva, Luiz Gabriel; Colato, Alexandre

    2013-04-01

    The restinga vegetation (sand coastal plain vegetation) consists of a mosaic of plant communities, which are defined by the characteristics of the substrates, resulting from the type and age of the depositional processes. This mosaic complex of vegetation types comprises restinga forest in advanced (high restinga) and medium regeneration stages (low restinga), each with particular differentiating vegetation characteristics. Of all ecosystems of the Atlantic Forest, restinga is the most fragile and susceptible to anthropic disturbances. The purpose of this study was evaluating the organic matter and aluminum saturation effects on soil quality index (SQI). Two locations were studied: State Park of the Serra do Mar, Picinguaba, in the city of Ubatuba (23°20' e 23°22' S / 44°48' e 44°52' W), and State Park of Cardoso Island in the city of Cananéia (25°03'05" e 25°18'18" S / 47°53'48" e 48° 05'42" W). The soil samples were collect at a depth of 0-10 cm, where concentrate 70% of vegetation root system. Was studied an additive model to evaluate soil quality index. The shallow root system development occurs due to low calcium levels, whose disability limits their development, but also can reflect on delay, restriction or even in the failure of the development vegetation. The organic matter is kept in the soil restinga ecosystem by high acidity, which reduces the decomposition of soil organic matter, which is very poor in nutrients. The base saturation, less than 10, was low due to low amounts of Na, K, Ca and Mg, indicating low nutritional reserve into the soil, due to very high rainfall and sandy texture, resulting in high saturation values for aluminum. Considering the critical threshold to 3% organic matter and for aluminum saturation to 40%, the IQS ranged from 0.95 to 0.1 as increased aluminum saturation and decreased the soil organic matter, indicating the main limitation to the growth of plants in this type of soil, when deforested.

  14. Using Riverine Natural Organic Matter to Test the Hypothesis that Soil Organic Matter is Modified by Contact with Sodium Hydroxide

    NASA Astrophysics Data System (ADS)

    Perdue, E. Michael; Driver, Shamus; Hertkorn, Norbert; Harir, Mourad; Schmitt-Kopplin, Philippe

    2016-04-01

    It has been postulated by some scientists that soil humic acids and fulvic acids are an artifact of alkaline extractions of soil. Riverine natural organic matter (NOM) is obtained in part by dissolution and transport of organic matter from soils by meteoric waters at acidic to circumneutral pH. The NOM may be fractionated into humic acid (HA), fulvic acid (FA), and hydrophilic NOM by adsorption of HA and FA onto XAD-8 resin at pH < 2, followed by their desorption with NaOH at pH 13. Alternatively, riverine NOM may be concentrated using reverse osmosis (RO) and desalted by cation exchange. Several properties of Suwannee River NOM prior to its isolation, after concentration by RO, and after the XAD-8 process are compared to detect modifications that might have resulted from exposure of the sample to low and high pH.

  15. Improving biodegradation potential of domestic wastewater by manipulating the size distribution of organic matter.

    PubMed

    Liu, Xiang; Chen, Qiuwen; Zhu, Liang

    2016-09-01

    Carbon source is a critical constraint on nutrient removal in domestic wastewater treatment. However, the functions of particulate organic matter (POM) and some organics with high molecular weight (HMW) are overlooked in the conventional process, as they cannot be directly assimilated into cells during microbial metabolism. This further aggravates the problem of carbon source shortage and thus affects the effluent quality. Therefore, to better characterize organic matter (OM) based MW distribution, microfiltration/ultrafiltration/nanofiltration (MF/UF/NF) membranes were used in parallel to fractionate OM, which obtained seven fractions. Hydrolysis acidification (HA) was adopted to manipulate the MW distribution of dissolved organic matter (DOM) and further explore the correlation between molecular size and biodegradability. Results showed that HA pretreatment of wastewater not only promoted transformation from POM to DOM, but also boosted biodegradability. After 8hr of HA, the concentration of dissolved organic carbon (DOC) increased by 65%, from the initial value of 20.25 to 33.48mg/L, and the biodegradability index (BOD5 (biochemical oxygen demand)/SCOD (soluble chemical oxygen demand)) increased from 0.52 to 0.74. Using MW distribution analysis and composition optimization, a new understanding on the characteristics of organics in wastewater was obtained, which is of importance to solving low C/N wastewater treatment in engineering practice.

  16. The Rusty Sink: Iron Promotes the Preservation of Organic Matter in Sediments

    NASA Astrophysics Data System (ADS)

    Lalonde, K. M.; Mucci, A.; Moritz, A.; Ouellet, A.; Gelinas, Y.

    2011-12-01

    The biogeochemical cycles of iron (Fe) and organic carbon (OC) are strongly interlinked. In oceanic waters, organic ligands have been shown to control the concentration of dissolved Fe [1], whereas in soils, solid Fe phases provide a sheltering and preservative effect for organic matter [2]. Until now however, the role of iron in the preservation of OC in sediments has not been clearly established. Here we show that 21.5 ± 8.6% of the OC in sediments is directly bound to reactive iron phases, which promote the preservation of OC in sediments. Iron-bound OC represents a global mass of 19 to 45 × 10^15 g of OC in surface marine sediments. This pool of OC is different from the rest of sedimentary OC, with 13C and nitrogen-enriched organic matter preferentially bound to Fe which suggests that biochemical fractionation occurs with OC-Fe binding. Preferential binding also affects the recovery of high molecular weight lipid biomarkers and acidic lignin oxidation products, changing the environmental message of proxies derived from these biomarkers. [1] Johnson, K. S., Gordon, R. M. & Coale, K. H. What controls dissolved iron in the world ocean? Marine Chemistry 57, 137-161 (1997). [2] Kaiser, K. & Guggenberger, G. The role of DOM sorption to mineral surfaces in the preservation of organic matter in soils. Organic Geochemistry 31, 711-725 (2000).

  17. Soil organic matter regulates molybdenum storage and mobility in forests

    USGS Publications Warehouse

    Marks, Jade A; Perakis, Steven; King, Elizabeth K; Pett-Ridge, Julie

    2015-01-01

    The trace element molybdenum (Mo) is essential to a suite of nitrogen (N) cycling processes in ecosystems, but there is limited information on its distribution within soils and relationship to plant and bedrock pools. We examined soil, bedrock, and plant Mo variation across 24 forests spanning wide soil pH gradients on both basaltic and sedimentary lithologies in the Oregon Coast Range. We found that the oxidizable organic fraction of surface mineral soil accounted for an average of 33 %of bulk soil Mo across all sites, followed by 1.4 % associated with reducible Fe, Al, and Mn-oxides, and 1.4 % in exchangeable ion form. Exchangeable Mo was greatest at low pH, and its positive correlation with soil carbon (C) suggests organic matter as the source of readily exchangeable Mo. Molybdenum accumulation integrated over soil profiles to 1 m depth (τMoNb) increased with soil C, indicating that soil organic matter regulates long-term Mo retention and loss from soil. Foliar Mo concentrations displayed no relationship with bulk soil Mo, and were not correlated with organic horizon Mo or soil extractable Mo, suggesting active plant regulation of Mo uptake and/or poor fidelity of extractable pools to bioavailability. We estimate from precipitation sampling that atmospheric deposition supplies, on average, over 10 times more Mo annually than does litterfall to soil. In contrast, bedrock lithology had negligible effects on foliar and soil Mo concentrations and on Mo distribution among soil fractions. We conclude that atmospheric inputs may be a significant source of Mo to forest ecosystems, and that strong Mo retention by soil organic matter limits ecosystem Mo loss via dissolution and leaching pathways.

  18. Isotopic constraints on the origin of meteoritic organic matter

    NASA Technical Reports Server (NTRS)

    Kerridge, J. F.

    1991-01-01

    Salient features of the isotopic distribution of H, C and N in the organic material found in carbonaceous meteorites are noted. Most organic fractions are strongly enriched in D with respect to the D/H ratio characteristic of H2 in the protosolar system; substantial variations in C-13/C-12 ratio are found among different molecular species, with oxidised species tending to be C-13 enriched relative to reduced species; some homologous series reveal systematic decrease in C-13/C-12 with increasing C number; considerable variation in N-15/N-14 ratio is observed within organic matter, though no systematic pattern to its distribution has yet emerged; no interelement correlations have been observed between isotope enrichments for the different biogenic elements. The isotopic complexity echoes the molecular diversity observed in meteoritic organic matter and suggests that the organic matter was formed by multiple processes and/or from multiple sources. However, existence of a few systematic patterns points towards survival of isotopic signatures characteristic of one or more specific processes. The widespread D enrichment implies either survival of many species of interstellar molecule or synthesis from a reservoir containing a significant interstellar component. Several of the questions raised above can be addressed by more detailed determination of the distribution of the H, C and N isotopes among different well-characterized molecular fractions. Thus, the present study is aimed at discovering whether the different amino acids have comparable D enrichments, which would imply local synthesis from a D-enriched reservoir, or very viable D enrichments, which would imply survival of some interstellar amino acids. The same approach is also being applied to polycyclic aromatic hydrocarbons. Because the analytical technique employed (secondary ion mass spectrometry) can acquire data for all three isotopic systems from each molecular fraction, any presently obscured interelement

  19. Effect of aggregation on SOC transport: linking soil properties to sediment organic matter

    NASA Astrophysics Data System (ADS)

    Kuhn, Nikolaus J.

    2016-04-01

    Soils are an interface between the Earth's spheres and shaped by the nature of the interaction between them. The relevance of soil properties for the nature of the interaction between atmosphere, hydrosphere and biosphere is well-studied and accepted, on point- or ecotone-scale. However, this understanding of the largely vertical connections between spheres is not matched by a similar recognition of soil properties affecting processes acting largely in a lateral way across the land surface, such as erosion, transport and deposition of soil and the associated organic matter. Understanding the redistribution of eroded soil organic matter falls into several disciplines, most notably soil science, agronomy, hydrology and geomorphology, and recently into biogeochemistry. Accordingly, the way soil and sediment are described differs: in soil science, aggregation and structure are essential properties, while most process-based soil erosion models treat soil as a mixture of individual mineral grains, based on concepts derived in fluvial geomorphology or civil engineering. The actual behavior of aggregated sediment and the associated organic matter is not reflected by either approach and difficult to capture due to the dynamic nature of aggregation, especially in an environment such as running water. Still, a proxy to assess the uncertainties introduced by aggregation on the behavior of soil/sediment organic while moving in water across landscapes and into the aquatic system would represent a major step forward. To develop such a proxy, a database collating relevant soil, organic matter and sediment properties could serve as an initial step to identify which soil types and erosion scenarios are prone to generate a high uncertainty compared to the use of soil texture in erosion models. Furthermore, it could serve to develop standardized analytical procedures for appropriate description of soil and organic matter as sediment.

  20. Hierarchical Dynamics Affecting Work Performance in Organizations

    NASA Astrophysics Data System (ADS)

    Guastello, Stephen J.

    This research explored the impact of organizational hierarchies on the dynamics of work performance and profitability. Theoretical expectations from game theory, synergetics, and other work on coupled nonlinear dynamical processes were reviewed and were found to make different predictions regarding the impact of hierarchical organization on behavior at any one level of the organization. University students participated in experimentally contrived organizations that had either two or three levels of hierarchy. The dynamics of work performance and profitability were assessed through nonlinear regression. Results showed that, for a two-level system, work performance was chaotic at both levels of organization, with a decrease in both noise and dimensionality at the upper level. For the three-level system, however, work performance at the lowest level showed gradual, non-asymptotic, and non-chaotic increases over time. The middle and upper management behaviors displayed both dampening and accelerating oscillatory pattern over time, an increase in dimensionality between workers and middle management, and a decrease in dimensionality from middle to top management. Nonlinear models outperformed linear alternatives by a margin upwards of 1.36:1 in variance accounted for.

  1. Organic matter and soil structure in the Everglades Agricultural Area

    SciTech Connect

    Wright, Alan L.; Hanlon, Edward A.

    2013-01-01

    This publication pertains to management of organic soils (Histosols) in the Everglades Agricultural Area (EAA). These former wetland soils are a major resource for efficient agricultural production and are important globally for their high organic matter content. Recognition of global warming has led to considerable interest in soils as a repository for carbon. Soils rich in organic matter essentially sequester or retain carbon in the profile and can contribute directly to keeping that sequestered carbon from entering the atmosphere. Identification and utilization of management practices that minimize the loss of carbon from organic soils to the atmosphere can minimize effects on global warming and increase the longevity of subsiding Histosols for agricultural use. Understanding and predicting how these muck soils will respond to current and changing land uses will help to manage soil carbon. The objectives of this document are to: a. Discuss organic soil oxidation relative to storing or releasing carbon and nitrogen b. Evaluate effects of cultivation (compare structure for sugarcane vs. uncultivated soil) Based upon the findings from the land-use comparison (sugarcane or uncultivated), organic carbon was higher with cultivation in the lower depths. There is considerable potential for minimum tillage and residue management to further enhance carbon sequestration in the sugarcane system. Carbon sequestration is improved and soil subsidence is slowed with sugarcane production, and both of these are positive outcomes. Taking action to increase or maintain carbon sequestration appears to be appropriate but may introduce some risk to farming operations. Additional management methods are needed to reduce this risk. For both the longevity of these organic soils and from a global perspective, slowing subsidence through BMP implementation makes sense. Since these BMPs also have considerable societal benefit, it remains to be seen if society will help to offset a part or all

  2. VARIABILITY IN THE DISTRIBUTION OF LIPID BIOMARKERS AND THEIR MOLECULAR ISOTOPIC COMPOSITION IN ALTAMAHA ESTUARINE SEDIMENTS: IMPLICATIONS FOR THE RELATIVE CONTRIBUTION OF ORGANIC MATTER FROM VARIOUS SOURCES

    EPA Science Inventory

    The estuarine mixing zone is an effective trap for particulate and dissolved organic matter From many sources, and thus greatly affects transport and deposition of organic matter between the land and ocean. This study examined sedimentary distributions of various fatty acids and ...

  3. VARIABILITY IN THE DISTRIBUTION OF LIPID BIOMARKERS AND THEIR MOLECULAR ISOTOPIC COMPOSITION IN ALTAMAHA ESTUARINE SEDIMENTS: IMPLICATIONS FOR THE RELATIVE CONTRIBUTION OF ORGANIC MATTER FROM VARIOUS SOURCES

    EPA Science Inventory

    The estuarine mixing zone is an effective trap for particulate and dissolved organic matter From many sources, and thus greatly affects transport and deposition of organic matter between the land and ocean. This study examined sedimentary distributions of various fatty acids and ...

  4. Formation of soil organic matter via biochemical and physical pathways of litter mass loss

    NASA Astrophysics Data System (ADS)

    Cotrufo, M. Francesca; Soong, Jennifer L.; Horton, Andrew J.; Campbell, Eleanor E.; Haddix, Michelle L.; Wall, Diana H.; Parton, William J.

    2015-10-01

    Soil organic matter is the largest terrestrial carbon pool. The pool size depends on the balance between formation of soil organic matter from decomposition of plant litter and its mineralization to inorganic carbon. Knowledge of soil organic matter formation remains limited and current C numerical models assume that stable soil organic matter is formed primarily from recalcitrant plant litter. However, labile components of plant litter could also form mineral-stabilized soil organic matter. Here we followed the decomposition of isotopically labelled above-ground litter and its incorporation into soil organic matter over three years in a grassland in Kansas, USA, and used laboratory incubations to determine the decay rates and pool structure of litter-derived organic matter. Early in decomposition, soil organic matter formed when non-structural compounds were lost from litter. Soil organic matter also formed at the end of decomposition, when both non-structural and structural compounds were lost at similar rates. We conclude that two pathways yield soil organic matter efficiently. A dissolved organic matter-microbial path occurs early in decomposition when litter loses mostly non-structural compounds, which are incorporated into microbial biomass at high rates, resulting in efficient soil organic matter formation. An equally efficient physical-transfer path occurs when litter fragments move into soil.

  5. Organic matter content of soil after logging of fir and redwood forests

    Treesearch

    Philip B. Durgin

    1980-01-01

    Organic matter in soil controls a variety of soil properties. A study in Humboldt County, California, evaluated changes in percentages of organic matter in soil as a function of time after timber harvest and soil depth in fir and redwood forests. To assess organic matter content, samples were taken from cutblocks of various ages in soil to depths of 1.33 m. Results...

  6. Research Highlight: Water-extractable organic matter from sandy loam soils

    USDA-ARS?s Scientific Manuscript database

    Labile organic matter plays important roles in soil health and nutrient cycling because of its dynamic nature. Water-extractable organic matter is part of the soil labile organic matter. In an article recently published in Agricultural & Environmental Letters, researchers report on the level and na...

  7. Organic matter and nutrient inputs to the Humber Estuary, England.

    PubMed

    Boyes, Suzanne; Elliott, Michael

    2006-01-01

    Estuaries are sinks for organic matter and nutrients entering both from their catchments and also from the adjacent lands and urban areas and in turn they are sources of such materials to the adjacent coast. The present paper quantifies the relative amounts of natural and anthropogenic organic matter and nutrients entering the Humber Estuary, Eastern England, including the allochthonous and autochthonous materials, those from urban and industrial sewage and from the catchment drainage of arable land. These data thus give a budget for the estuary which in turn answers questions fundamental to the management of the estuary. The estimations within the study have been carried out against a background of designating estuaries under the European Union Urban Waste-water Treatment Directive and the EU Nitrates Directive. The assessment has particularly addressed the question, related to the former Directive, of whether the Humber Estuary is eutrophic or likely to become eutrophic unless management measures are taken. Thus the paper indicates the nature and value of control measures such as treatment plant upgrading and the designation of Nitrate Vulnerable Zones. The paper includes the recent national and European discussions on the designation of areas under these Directives. Finally, the study has allowed a quantification of the present organic inputs to the estuary in comparison to those entering prior to large scale land-claim which had removed natural organic-producing wetlands.

  8. Organic speciation of size-segregated atmospheric particulate matter

    NASA Astrophysics Data System (ADS)

    Tremblay, Raphael

    Particle size and composition are key factors controlling the impacts of particulate matter (PM) on human health and the environment. A comprehensive method to characterize size-segregated PM organic content was developed, and evaluated during two field campaigns. Size-segregated particles were collected using a cascade impactor (Micro-Orifice Uniform Deposit Impactor) and a PM2.5 large volume sampler. A series of alkanes and polycyclic aromatic hydrocarbons (PAHs) were solvent extracted and quantified using a gas chromatograph coupled with a mass spectrometer (GC/MS). Large volume injections were performed using a programmable temperature vaporization (PTV) inlet to lower detection limits. The developed analysis method was evaluated during the 2001 and 2002 Intercomparison Exercise Program on Organic Contaminants in PM2.5 Air Particulate Matter led by the US National Institute of Standards and Technology (NIST). Ambient samples were collected in May 2002 as part of the Tampa Bay Regional Atmospheric Chemistry Experiment (BRACE) in Florida, USA and in July and August 2004 as part of the New England Air Quality Study - Intercontinental Transport and Chemical Transformation (NEAQS - ITCT) in New Hampshire, USA. Morphology of the collected particles was studied using scanning electron microscopy (SEM). Smaller particles (one micrometer or less) appeared to consist of solid cores surrounded by a liquid layer which is consistent with combustion particles and also possibly with particles formed and/or coated by secondary material like sulfate, nitrate and secondary organic aerosols. Source apportionment studies demonstrated the importance of stationary sources on the organic particulate matter observed at these two rural sites. Coal burning and biomass burning were found to be responsible for a large part of the observed PAHs during the field campaigns. Most of the measured PAHs were concentrated in particles smaller than one micrometer and linked to combustion sources

  9. Competitive Sorption and Desorption of Chlorinated Organic Solvents (DNAPLs) in Engineered Natural Organic Matter

    SciTech Connect

    Tang, Jixin; Weber, Walter J., Jr.

    2004-03-31

    The effects of artificially accelerated geochemical condensation and maturation of natural organic matter on the sorption and desorption of trichloroethylene (TCE) and tetrachloroethylene (PCE) were studied. The sorption and desorption of TCE in the presence and absence of the competing PCE and 1,2-dichlorobenzene (DCB) were also examined. A sphagnum peat comprising geologically young organic matter was artificially ''aged'' using superheated water, thus increasing the aromaticity and the degree of condensation of its associated organic matter. The sorption of all solutes tested were increased remarkably and their respective desorptions reduced, by the aged peat. The sorption capacities and isotherm nonlinearities of the peat for both TCE and PCE were found to increase as treatment temperature increased. In the competitive sorption studies, both PCE and DCB were found to depress TCE sorption, with PCE having greater effects than DCB, presumably because the molecular structure o f the former is more similar to that of TCE.

  10. Effluent organic matter (EfOM) characterization by simultaneous measurement of proteins and humic matter.

    PubMed

    Vakondios, Nikos; Koukouraki, Elisavet E; Diamadopoulos, Evan

    2014-10-15

    This work developed a method, based on the Lowry method and Frølund modification, for the simultaneous determination of proteins and humic matter in wastewater effluent samples at low concentrations. The method was based on simultaneous spectrophotometric measurements of proteins and humic matter at 750 nm in the absence and presence of CuSO4, which is responsible for increasing the absorbance only in the presence of to proteins. Statistical analysis through ANOVA showed that the response surface of the method fit the experimental measurements at significance level lower than 0.05, indicating satisfactory fit. The quantification limits of the proposed method were 0.5-30 mg/l for proteins and 2-30 mg/l for humic matter. The presence of carbohydrates did not interfere with the analysis of proteins and humic matter at carbohydrate concentrations below 35-40 mg/l. The Lowry method overestimated the concentration of the proteins because of the presence of humic substances. A carbon balance indicated that the analytical method developed could provide a satisfactory distribution of the main organic constituents in wastewater and effluents.

  11. Modelling of organic matter dynamics during the composting process.

    PubMed

    Zhang, Y; Lashermes, G; Houot, S; Doublet, J; Steyer, J P; Zhu, Y G; Barriuso, E; Garnier, P

    2012-01-01

    Composting urban organic wastes enables the recycling of their organic fraction in agriculture. The objective of this new composting model was to gain a clearer understanding of the dynamics of organic fractions during composting and to predict the final quality of composts. Organic matter was split into different compartments according to its degradability. The nature and size of these compartments were studied using a biochemical fractionation method. The evolution of each compartment and the microbial biomass were simulated, as was the total organic carbon loss corresponding to organic carbon mineralisation into CO(2). Twelve composting experiments from different feedstocks were used to calibrate and validate our model. We obtained a unique set of estimated parameters. Good agreement was achieved between the simulated and experimental results that described the evolution of different organic fractions, with the exception of some compost because of a poor simulation of the cellulosic and soluble pools. The degradation rate of the cellulosic fraction appeared to be highly variable and dependent on the origin of the feedstocks. The initial soluble fraction could contain some degradable and recalcitrant elements that are not easily accessible experimentally.

  12. Factors Affecting Morbidity in Solid Organ Injuries.

    PubMed

    Baygeldi, Serdar; Karakose, Oktay; Özcelik, Kazım Caglar; Pülat, Hüseyin; Damar, Sedat; Eken, Hüseyin; Zihni, İsmail; Çalta, Alpaslan Fedai; Baç, Bilsel

    2016-01-01

    Background and Aim. The aim of this study was to investigate the effects of demographic characteristics, biochemical parameters, amount of blood transfusion, and trauma scores on morbidity in patients with solid organ injury following trauma. Material and Method. One hundred nine patients with solid organ injury due to abdominal trauma during January 2005 and October 2015 were examined retrospectively in the General Surgery Department of Dicle University Medical Faculty. Patients' age, gender, trauma interval time, vital status (heart rate, arterial tension, and respiratory rate), hematocrit (HCT) value, serum area aminotransferase (ALT) and aspartate aminotransferase (AST) values, presence of free abdominal fluid in USG, trauma mechanism, extra-abdominal system injuries, injured solid organs and their number, degree of injury in abdominal CT, number of blood transfusions, duration of hospital stay, time of operation (for those undergoing operation), trauma scores (ISS, RTS, Glasgow coma scale, and TRISS), and causes of morbidity and mortality were examined. In posttraumatic follow-up period, intra-abdominal hematoma infection, emboli, catheter infection, and deep vein thrombosis were monitored as factors of morbidity. Results. One hundred nine patients were followed up and treated due to isolated solid organ injury following abdominal trauma. There were 81 males (74.3%) and 28 females (25.7%), and the mean age was 37.6 ± 18.28 (15-78) years. When examining the mechanism of abdominal trauma in patients, the following results were obtained: 58 (53.3%) traffic accidents (22 out-vehicle and 36 in-vehicle), 27 (24.7%) falling from a height, 14 (12.9%) assaults, 5 (4.5%) sharp object injuries, and 5 (4.5%) gunshot injuries. When evaluating 69 liver injuries scaled by CT the following was detected: 14 (20.3%) of grade I, 32 (46.4%) of grade II, 22 (31.8%) of grade III, and 1 (1.5%) of grade IV. In 63 spleen injuries scaled by CT the following was present: grade I in 21

  13. Factors Affecting Morbidity in Solid Organ Injuries

    PubMed Central

    Baygeldi, Serdar; Karakose, Oktay; Özcelik, Kazım Caglar; Pülat, Hüseyin; Damar, Sedat; Eken, Hüseyin; Zihni, İsmail; Çalta, Alpaslan Fedai; Baç, Bilsel

    2016-01-01

    Background and Aim. The aim of this study was to investigate the effects of demographic characteristics, biochemical parameters, amount of blood transfusion, and trauma scores on morbidity in patients with solid organ injury following trauma. Material and Method. One hundred nine patients with solid organ injury due to abdominal trauma during January 2005 and October 2015 were examined retrospectively in the General Surgery Department of Dicle University Medical Faculty. Patients' age, gender, trauma interval time, vital status (heart rate, arterial tension, and respiratory rate), hematocrit (HCT) value, serum area aminotransferase (ALT) and aspartate aminotransferase (AST) values, presence of free abdominal fluid in USG, trauma mechanism, extra-abdominal system injuries, injured solid organs and their number, degree of injury in abdominal CT, number of blood transfusions, duration of hospital stay, time of operation (for those undergoing operation), trauma scores (ISS, RTS, Glasgow coma scale, and TRISS), and causes of morbidity and mortality were examined. In posttraumatic follow-up period, intra-abdominal hematoma infection, emboli, catheter infection, and deep vein thrombosis were monitored as factors of morbidity. Results. One hundred nine patients were followed up and treated due to isolated solid organ injury following abdominal trauma. There were 81 males (74.3%) and 28 females (25.7%), and the mean age was 37.6 ± 18.28 (15–78) years. When examining the mechanism of abdominal trauma in patients, the following results were obtained: 58 (53.3%) traffic accidents (22 out-vehicle and 36 in-vehicle), 27 (24.7%) falling from a height, 14 (12.9%) assaults, 5 (4.5%) sharp object injuries, and 5 (4.5%) gunshot injuries. When evaluating 69 liver injuries scaled by CT the following was detected: 14 (20.3%) of grade I, 32 (46.4%) of grade II, 22 (31.8%) of grade III, and 1 (1.5%) of grade IV. In 63 spleen injuries scaled by CT the following was present: grade I in

  14. Pyrolysis and mass spectrometry studies of meteoritic organic matter.

    PubMed

    Sephton, M A

    2012-01-01

    Meteorites are fragments of extraterrestrial materials that fall to the Earth's surface. The carbon-rich meteorites are derived from ancient asteroids that have remained relatively unprocessed since the formation of the Solar System 4.56 billion years ago. They contain a variety of extraterrestrial organic molecules that are a record of chemical evolution in the early Solar System and subsequent aqueous and thermal processes on their parent bodies. The major organic component (>70%) is a macromolecular material that resists straightforward solvent extraction. In response to its intractable nature, the most common means of investigating this exotic material involves a combination of thermal decomposition (pyrolysis) and mass spectrometry. Recently the approach has also been used to explore controversial claims of organic matter in meteorites from Mars. This review summarizes the pyrolysis data obtained from meteorites and outlines key interpretations.

  15. Effects of Nitrogen Fertilizer and Harvesting Frequency on Soil Organic Matter Pools Under Switchgrass Agriculture

    NASA Astrophysics Data System (ADS)

    Valdez, Z. P.; Hockaday, W. C.; Gallagher, M. E.; Masiello, C. A.; Gao, X.

    2013-12-01

    Intensive agriculture has the potential to reduce soil carbon stocks in the years following initial cultivation, although the magnitude and direction of the effect can vary with ecosystem and management factors. The cropping of switchgrass (Panicum virgatum) for biomass shows potential for high yields in marginal lands with low fertilizer inputs, while the extensive root system can act to improve soil quality and sequester atmospheric carbon dioxide in the soil carbon pool. We are investigating the impact of nitrogen fertilizer inputs and harvesting frequency on soil organic matter quantity and quality in a biofuels cropping trial in Michigan. Here we test the hypothesis that harvest and fertilization rate can affect the partitioning of organic matter into different storage pools within the 0-60 cm of soil: roots, particulate organic matter (POM) (density <1.8 g/cm3), and protected organic matter (density > 1.8 g/cm3). Additionally, we use 13C Nuclear Magnetic Resonance (NMR) spectroscopy to study the bulk chemistry (carbohydrate, lignin, lipid, and protein) of the roots and POM. The NMR data also allow us to estimate the relative decomposition of the soil organic matter using a standard decomposition index (alkyl/O-alkyl peak ratio). We use the data to infer the influence of crop management on the mechanisms of soil C storage and mechanisms of stabilization in switchgrass agriculture. Initial results have shown a significant change in carbon stocks at depths between 15-60 cm for the high and low fertilization rates, 196 kg/m3 and 0kg/m3 respectively, although the harvesting time and frequency did not create a substantial difference on carbon stocks. The root bulk chemistry has not shown consistent results among management practices

  16. Characterizing Groundwater Sources of Organic Matter to Arctic Coastal Waters

    NASA Astrophysics Data System (ADS)

    Connolly, C. T.; Spencer, R. G.; Cardenas, M. B.; Bennett, P. C.; McNichol, A. P.; McClelland, J. W.

    2016-12-01

    The Arctic is projected to transition from a runoff-dominated system to a groundwater-dominated system as permafrost thaws due to climate change. This fundamental shift in hydrology is expected to increase groundwater flow to Arctic coastal waters, which may be a significant source of dissolved organic matter (DOM) to these waters—even under present conditions—that has been largely overlooked. Here we quantify and elucidate sources of groundwater DOM inputs to lagoons along the eastern Alaskan Beaufort Sea coast using an approach that combines concentration measurements and radiocarbon dating of groundwater, soil profiles, and soil leachable dissolved organic carbon (DOC). Samples were collected in late summer, when soil thaw depths (active layer) were near their maximum extent. As anticipated, the radiocarbon age of bulk soil organic matter increased with depth (modern - 6,100 yBP), while the amount of extractable DOC decreased with depth within the active layer. However, amounts of extractable DOC increased dramatically in thawed permafrost samples collected directly below the actively layer. Concentrations of DOM in groundwater (ranging from 902 to 5,118 μmolL-1 DOC) are one to two orders of magnitude higher than those measured in lagoons and nearby river water. In contrast, the 14C-DOC ages of groundwater (1,400 ± 718 s.d. yBP), lagoon water (1,750 yBP), and river water (1,610 yBP) are comparable. Together these results suggest that: (1) groundwater provides a highly concentrated input of old DOC to Arctic coastal waters; (2) groundwater DOM is likely sourced from organic matter spanning the entire soil profile; and (3) the DOM in rivers along the eastern Alaskan Beaufort Sea coast during late summer is strongly influenced by groundwater sources, but is much lower in concentration due to photo-mineralization and/or biological consumption. These results are key for assessing how changes in land-ocean export of organic matter as permafrost thaws will change

  17. Soft X-Ray Photoionizing Organic Matter from Comet Wild 2: Evidence for the Production of Organic Matter by Impact Processes

    NASA Technical Reports Server (NTRS)

    Zolensky, Michael E.; Wirick, S.; Flynn, G. J.; Jacobsen, C.; Na

    2011-01-01

    The Stardust mission collected both mineral and organic matter from Comet Wild 2 [1,2,3,4]. The organic matter discovered in Comet Wild 2 ranges from aromatic hydrocarbons to simple aliphatic chains and is as diverse and complex as organic matter found in carbonaceous chondrites and interplanetary dust particles.[3,5,6,7,8,9]. Compared to insoluble organic matter from carbonaceous chondrites the organic matter in Comet Wild 2 more closely resembles organic matter found in the IDPS both hydrous and anhydrous. Common processes for the formation of organic matter in space include: Fischer-Tropsch, included with this aqueous large body and moderate heating alterations; UV irradiation of ices; and; plasma formation and collisions. The Fischer-Tropsch could only occur on large bodies processes, and the production of organic matter by UV radiation is limited by the penetration depth of UV photons, on the order of a few microns or less for most organic matter, so once organic matter coats the ices it is formed from, the organic production process would stop. Also, the organic matter formed by UV irradiation would, by the nature of the process, be in-sensitive to photodissocation from UV light. The energy of soft X-rays, 280-300 eV occur within the range of extreme ultraviolet photons. During the preliminary examination period we found a particle that nearly completely photoionized when exposed to photons in the energy range 280-310eV. This particle experienced a long exposure time to the soft x-ray beam which caused almost complete mass loss so little chemical information was obtain. During the analysis of our second allocation we have discovered another particle that photoionized at these energies but the exposure time was limited and more chemical information was obtained.

  18. Mercury dilution by autochthonous organic matter in a fertilized mangrove wetland.

    PubMed

    Machado, Wilson; Sanders, Christian J; Santos, Isaac R; Sanders, Luciana M; Silva-Filho, Emmanoel V; Luiz-Silva, Wanilson

    2016-06-01

    A dated sediment core from a highly-fertilized mangrove wetland located in Cubatão (SE Brazil) presented a negative correlation between mercury (Hg) and organic carbon contents. This is an unusual result for a metal with well-known affinity to organic matter. A dilution of Hg concentrations by autochthonous organic matter explained this observation, as revealed by carbon stable isotopes signatures (δ(13)C). Mercury dilution by the predominant mangrove-derived organic matter counterbalanced the positive influences of algal-derived organic matter and clay contents on Hg levels, suggesting that deleterious effects of Hg may be attenuated. Considering the current paradigm on the positive effect of organic matter on Hg concentrations in coastal sediments and the expected increase in mangrove organic matter burial due to natural and anthropogenic stimulations of primary production, predictions on the influences of organic matter on Hg accumulation in mangrove wetlands deserve caution.

  19. ENVIRONMENTAL RESEARCH BRIEF: CHARACTERIZATION OF ORGANIC MATTER IN SOIL AND AQUIFER SOLIDS

    EPA Science Inventory

    The focus of this work was the evaluation of analytical methods to determine and characterize fractions of subsurface organic matter. Major fractions of total organic carbon (TOC) include: particulate organic carbon (POC) in aquifer material, dissolved organic carbon (DOC) and ...

  20. Leaching of organic acids from macromolecular organic matter by non-supercritical CO2

    NASA Astrophysics Data System (ADS)

    Sauer, P.; Glombitza, C.; Kallmeyer, J.

    2012-04-01

    The storage of CO2 in underground reservoirs is discussed controversly in the scientific literature. The worldwide search for suitable storage formations also considers coal-bearing strata. CO2 is already injected into seams for enhanced recovery of coal bed methane. However, the effects of increased CO2 concentration, especially on organic matter rich formations, are rarely investigated. The injected CO2 will dissolve in the pore water, causing a decrease in pH and resulting in acidic formation waters. Huge amounts of low molecular weight organic acids (LMWOAs) are chemically bound to the macromolecular matrix of sedimentary organic matter and may be liberated by hydrolysis, which is enhanced by the acidic porewater. Recent investigations outlined the importance of LMWOAs as a feedstock for microbial life in the subsurface [1]. Therefore, injection of CO2 into coal formations may result in enhanced nutrient supply for subsurface microbes. To investigate the effect of high concentrations of dissolved CO2 on the release of LMWOAs from coal we developed an inexpensive high-pressure high temperature system that allows manipulating the partial pressure of dissolved gases at pressures and temperatures up to 60 MPa and 120° C, respectively. In a reservoir vessel, gases are added to saturate the extraction medium to the desired level. Inside the extraction vessel hangs a flexible and inert PVDF sleeve (polyvinylidene fluoride, almost impermeable for gases), holding the sample and separating it from the pressure fluid. The flexibility of the sleeve allows for subsampling without loss of pressure. Coal samples from the DEBITS-1 well, Waikato Basin, NZ (R0 = 0.29, TOC = 30%). were extracted at 90° C and 5 MPa, either with pure or CO2-saturated water. Subsamples were taken at different time points during the extraction. The extracted LMWOAs such as formate, acetate and oxalate were analysed by ion chromatography. Yields of LMWOAs were higher with pure water than with CO2

  1. Extending the analytical window for water-soluble organic matter in sediments by aqueous Soxhlet extraction

    NASA Astrophysics Data System (ADS)

    Schmidt, Frauke; Koch, Boris P.; Witt, Matthias; Hinrichs, Kai-Uwe

    2014-09-01

    Dissolved organic matter (DOM) in marine sediments is a complex mixture of thousands of individual constituents that participate in biogeochemical reactions and serve as substrates for benthic microbes. Knowledge of the molecular composition of DOM is a prerequisite for a comprehensive understanding of the biogeochemical processes in sediments. In this study, interstitial water DOM was extracted with Rhizon samplers from a sediment core from the Black Sea and compared to the corresponding water-extractable organic matter fraction (<0.4 μm) obtained by Soxhlet extraction, which mobilizes labile particulate organic matter and DOM. After solid phase extraction (SPE) of DOM, samples were analyzed for the molecular composition by Fourier Transform Ion-Cyclotron Resonance Mass Spectrometry (FT-ICR MS) with electrospray ionization in negative ion mode. The average SPE extraction yield of the dissolved organic carbon (DOC) in interstitial water was 63%, whereas less than 30% of the DOC in Soxhlet-extracted organic matter was recovered. Nevertheless, Soxhlet extraction yielded up to 4.35% of the total sedimentary organic carbon, which is more than 30-times the organic carbon content of the interstitial water. While interstitial water DOM consisted primarily of carbon-, hydrogen- and oxygen-bearing compounds, Soxhlet extracts yielded more complex FT-ICR mass spectra with more peaks and higher abundances of nitrogen- and sulfur-bearing compounds. The molecular composition of both sample types was affected by the geochemical conditions in the sediment; elevated concentrations of HS- promoted the early diagenetic sulfurization of organic matter. The Soxhlet extracts from shallow sediment contained specific three- and four-nitrogen-bearing molecular formulas that were also detected in bacterial cell extracts and presumably represent proteinaceous molecules. These compounds decreased with increasing sediment depth while one- and two-nitrogen-bearing molecules increased

  2. Influence of organic matter, cations and surfactants on the antimicrobial activity of Melaleuca alternifolia (tea tree) oil in vitro.

    PubMed

    Hammer, K A; Carson, C F; Riley, T V

    1999-03-01

    The effect of some potentially interfering substances and conditions on the antimicrobial activity of Melaleuca alternifolia (tea tree) oil was investigated. Agar and broth dilution methods were used to determine minimum inhibitory and cidal concentrations of tea tree oil in the presence and absence of each potentially interfering substance. Activity was determined against Gram-positive and -negative bacteria, and Candida albicans. Minimum inhibitory or cidal concentrations differed from controls by two or more dilutions, for one or more organisms, where Tween-20, Tween-80, skim-milk powder and bovine serum albumin were assessed. These differences were not seen when assays were performed in anaerobic conditions, or in the presence of calcium and magnesium ions. The effect of organic matter on the antimicrobial activity of tea tree oil was also investigated by an organic soil neutralization test. Organisms were exposed to lethal concentrations of tea tree oil ranging from 1-10% (v/v), in the presence of 1-30% (w/v) dry bakers' yeast. After 10 min contact time, viability was determined. At > or = 1%, organic matter compromised the activity of each concentration of tea tree oil against Staphylococcus aureus and C. albicans. At 10% or more, organic matter compromised the activity of each tea tree oil concentration against Pseudomonas aeruginosa. Organic matter affected 1 and 2% tea tree oil, but not 4 and 8%, against Escherichia coli. In conclusion, organic matter and surfactants compromise the antimicrobial activity of tea tree oil, although these effects vary between organisms.

  3. Organic Matter as an Indicator of Soil Degradation

    NASA Astrophysics Data System (ADS)

    Romero Diaz, Asuncion; Damian Ruiz Sinoga, Jose

    2010-05-01

    Numerous and expensive physical-chemical tests are often carried out to determine the level of soil degration. This study was to find one property, as Organic Matter, which is usually analyzed for determine the soil degradation status. To do this 19 areas in the south and southeast of the Iberian Peninsula (provinces of Málaga, Granada, Almería y Murcia) were selected and a wide sampling process was carried out. Sampling points were spread over a wide pluviometric gradient (from 1100 mm/yr to 232 mm/yr) covering the range from Mediterranean wet to dry. 554 soil surface samples were taken from soil (0-10 cm) and the following properties were analyzed: Texture, Organic Matter (OM), Electric Conductivity (EC), Aggregate Stability (AE) y Cation Exchange Capacity (CEC). These properties were intercorrelated and also with rainfall and the K factor of soil erosion, calculated for each sampling point. Los results obtained by applying the Pearson correlation coefficient to the database shows how as rainfall increases so does OM content (0,97) and la CEC (0,89), but K factor (-0,80) reacts inversely. The content of OM in the soil is related to its biological activity and this in turn is the result of available wáter within the system and, consequently, rainfall. This is specially important in fragile and complex ecogeomorphological systems as is the case of the Mediterranean, where greater or lesser rainfall is similarly reflected in the levels of increase or decrease of soil organic matter. This affirmation is reinforced by linking the organic matter of the soil with other indicative properties such as CEC and erosion, as has been shown by various authors (Imeson y Vis, 1984; De Ploey & Poesen, 1985; Le Bissonnais, 1996; Boix-Fayos et al., 2001; Cammeraat y Imeson, 1998; Cerdá, 1998). As has been stated, there is a direct relationship between rainfall, organic matter content, cation exchange capacity, structural stability, and the resistence to soil erosion factor

  4. Production of Dissolved Organic Matter During Fungal Wood Rot Decay

    NASA Astrophysics Data System (ADS)

    Filley, T. R.; Jellison, J.; Goodell, B.; Kelley, S.; Davis, M.

    2002-12-01

    Dissolved organic matter mediates numerous biogeochemical processes in soil systems impacting subsurface microbial activity, redox chemistry, soil structure, and carbon and nitrogen sequestration. The structure and chemistry of DOM is a function of the inherited chemistry of the source material, the type of microbial action that has occurred, and selective interaction with mineral substrates. The type of fungal decomposition imparted to woody tissue is a major factor in determining the nature of DOM in forest soils. In order to investigate the relationship between fungal decomposition and the nature of DOM in coniferous forest soils we conducted 32-week inoculation studies on spruce sapwood with basidiomycete brown-rot wood decay fungi where leachable dissolved and colloidal organic matter was separated from decayed residue. A detailed examination of the organic fractions was conducted using 13C-labeled tetramethylammonium hydroxide thermochemolysis, solid-state 13C-NMR, and electrospray mass spectrometry. The progressive stages of microbial decay (cellulolytic and ligninolytic) were manifested in the chemical composition of the DOM which showed an evolution from a composition initially polysaccharide rich to one dominated by mildly oxidized and demethylated lignin. Upon removal of all polysaccharides at 16 weeks the DOM (up to 10% by weight of the original tissue) looked chemically distinct from the degraded residue

  5. Effects of Dissolved Organic Matter Source on Wetland Bacterial Metabolism

    NASA Astrophysics Data System (ADS)

    Ward, A. K.

    2005-05-01

    Wetlands are rich environments for organic matter production from a variety of wetland plant types. Investigations of the Talladega Wetland Ecosystem (TWE) in the southeastern U.S. show that bacterioplankton productivity is driven by dissolved organic carbon derived from wetland plants. The TWE is formed from a small coastal plain stream that has been dammed by beaver activity and resides in a forested catchment. In this study, bacterioplankton communities sampled from the wetland were amended with leachate from two different plants common in the TWE, the soft rush, Juncus effusus, and hazel alder, Alnus serrulata, and compared to unamended controls. The bacterioplankton response was examined by measuring bacterial carbon productivity and by an array of fluorescent microscope techniques used to distinguish metabolically active and non-active cells. Both plant leachates elicited rapid and significant increases in productivity and numbers of metabolically active bacterial cells. However, the timeframe of response, the magnitude of response, and the bacterial morphotypes varied depending on the leachate source. This study suggests that wetland bacterial communities contain different sub-component populations that may generally occur in low numbers, but that can adapt and respond rapidly to different sources of organic matter native to the wetland.

  6. Lead sequestration and species redistribution during soil organic matter decomposition

    USGS Publications Warehouse

    Schroth, A.W.; Bostick, B.C.; Kaste, J.M.; Friedland, A.J.

    2008-01-01

    The turnover of soil organic matter (SOM) maintains a dynamic chemical environment in the forest floor that can impact metal speciation on relatively short timescales. Here we measure the speciation of Pb in controlled and natural organic (O) soil horizons to quantify changes in metal partitioning during SOM decomposition in different forest litters. We provide a link between the sequestration of pollutant Pb in O-horizons, estimated by forest floor Pb inventories, and speciation using synchrotron-based X-ray fluorescence and X-ray absorption spectroscopy. When Pb was introduced to fresh forest Oi samples, it adsorbed primarily to SOM surfaces, but as decomposition progressed over two years in controlled experiments, up to 60% of the Pb was redistributed to pedogenic birnessite and ferrihydrite surfaces. In addition, a significant fraction of pollutant Pb in natural soil profiles was associated with similar mineral phases (???20-35%) and SOM (???65-80%). Conifer forests have at least 2-fold higher Pb burdens in the forest floor relative to deciduous forests due to more efficient atmospheric scavenging and slower organic matter turnover. We demonstrate that pedogenic minerals play an important role in surface soil Pb sequestration, particularly in deciduous forests, and should be considered in any assessment of pollutant Pb mobility. ?? 2008 American Chemical Society.

  7. Complexation of lead by organic matter in Luanda Bay, Angola.

    PubMed

    Leitão, Anabela; Santos, Ana Maria; Boaventura, Rui A R

    2015-10-01

    Speciation is defined as the distribution of an element among different chemical species. Although the relation between speciation and bioavailability is complex, the metal present as free hydrated ion, or as weak complexes able to dissociate, is usually more bioavailable than the metal incorporated in strong complexes or adsorbed on colloidal or particulate matter. Among the analytical techniques currently available, anodic stripping voltammetry (ASV) has been one of the most used in the identification and quantification of several heavy metal species in aquatic systems. This work concerns the speciation study of lead, in original (natural, non-filtered) and filtered water samples and in suspensions of particulate matter and sediments from Luanda Bay (Angola). Complexes of lead with organics were identified and quantified by differential pulse anodic stripping voltammetry technique. Each sample was progressively titrated with a Pb(II) standard solution until complete saturation of the organic ligands. After each addition of Pb(II), the intensity, potential and peak width of the voltammetric signal were measured. The results obtained in this work show that more than 95 % of the lead in the aquatic environment is bound in inert organic complexes, considering all samples from different sampling sites. In sediment samples, the lead is totally (100 %) complexed with ligands adsorbed on the particles surface. Two kinds of dominant lead complexes, very strong (logK >11) and strong to moderately strong (8< logK <11), were found, revealing the lead affinity for the stronger ligands.

  8. Lead Sequestration And Species Redistribution During Soil Organic Matter Decomposition

    SciTech Connect

    Schroth, A.W.; Bostick, B.C.; Kaste, J.M.; Friedland, A.J.

    2009-05-27

    The turnover of soil organic matter (SOM) maintains a dynamic chemical environment in the forest floor that can impact metal speciation on relatively short timescales. Here we measure the speciation of Pb in controlled and natural organic (O) soil horizons to quantify changes in metal partitioning during SOM decomposition in different forest litters. We provide a link between the sequestration of pollutant Pb in O-horizons, estimated by forest floor Pb inventories, and speciation using synchrotron-based X-rayfluorescence and X-ray absorption spectroscopy. When Pb was introduced to fresh forest O{sub i} samples, it adsorbed primarily to SOM surfaces, but as decomposition progressed over two years in controlled experiments, up to 60% of the Pb was redistributed to pedogenic birnessite and ferrihydrite surfaces. In addition, a significant fraction of pollutant Pb in natural soil profiles was associated with similar mineral phases ({approx}20--35%) and SOM ({approx}65--80%). Conifer forests have at least 2-fold higher Pb burdens in the forest floor relative to deciduous forests due to more efficient atmospheric scavenging and slower organic matter turnover. We demonstrate that pedogenic minerals play an important role in surface soil Pb sequestration, particularly in deciduous forests, and should be considered in any assessment of pollutant Pb mobility.

  9. Lead Sequestration and Species Redistribution During Soil Organic Matter Decomposition

    SciTech Connect

    Schroth,A.; Bostick, B.; Kaste, J.; Friedland, A.

    2008-01-01

    The turnover of soil organic matter (SOM) maintains a dynamic chemical environment in the forest floor that can impact metal speciation on relatively short timescales. Here we measure the speciation of Pb in controlled and natural organic (O) soil horizons to quantify changes in metal partitioning during SOM decomposition in different forest litters. We provide a link between the sequestration of pollutant Pb in O-horizons, estimated by forest floor Pb inventories, and speciation using synchrotron-based X-ray fluorescence and X-ray absorption spectroscopy. When Pb was introduced to fresh forest Oi samples, it adsorbed primarily to SOM surfaces, but as decomposition progressed over two years in controlled experiments, up to 60% of the Pb was redistributed to pedogenic birnessite and ferrihydrite surfaces. In addition, a significant fraction of pollutant Pb in natural soil profiles was associated with similar mineral phases ({approx}20-35%) and SOM ({approx}65-80%). Conifer forests have at least 2-fold higher Pb burdens in the forest floor relative to deciduous forests due to more efficient atmospheric scavenging and slower organic matter turnover. We demonstrate that pedogenic minerals play an important role in surface soil Pb sequestration, particularly in deciduous forests, and should be considered in any assessment of pollutant Pb mobility.

  10. Unraveling the chemical space of terrestrial and meteoritic organic matter

    NASA Astrophysics Data System (ADS)

    Schmitt-Kopplin, Philippe; Harir, Mourad; Hertkorn, Norbert; Kanawati, Basem; Ruf, Alexander; Quirico, Eric; Bonal, Lydie; Beck, Pierre; Gabelica, Zelimir

    2015-04-01

    In terrestrial environments natural organic matter (NOM) occurs in soils, freshwater and marine environments, in the atmosphere and represents an exceedingly complex mixture of organic compounds that collectively exhibits a nearly continuous range of properties (size-reactivity continuum). In these materials, the "classical" biogeosignatures of the (biogenic and geogenic) precursor molecules, like lipids, lignins, proteins and natural products have been attenuated, often beyond recognition, during a succession of biotic and abiotic (e.g. photo- and redox chemistry) reactions. Because of this loss of biochemical signature, these materials can be designated non-repetitive complex systems. The access to extra-terrestrial organic matter is given i.e. in the analysis of meteoritic materials. Numerous descriptions of organic molecules present in organic chondrites have improved our understanding of the early interstellar chemistry that operated at or just before the birth of our solar system. However, many molecular analyses are so far targeted toward selected classes of compounds with a particular emphasis on biologically active components in the context of prebiotic chemistry. Here we demonstrate that a non-targeted ultrahigh-resolution molecular analysis of the solvent-accessible organic fraction of meteorite extracted under mild conditions allows one to extend its indigenous chemical diversity to tens of thousands of different molecular compositions and likely millions of diverse structures. The description of the molecular complexity provides hints on heteroatoms chronological assembly, shock and thermal events and revealed recently new classes of thousands of novel organic, organometallic compounds uniquely found in extra-terrestrial materials and never described in terrestrial systems. This high polymolecularity suggests that the extraterrestrial chemodiversity is high compared to terrestrial relevant biological and biogeochemical-driven chemical space. (ultra

  11. Catchment scale molecular composition of hydrologically mobilized dissolved organic matter

    NASA Astrophysics Data System (ADS)

    Raeke, Julia; Lechtenfeld, Oliver J.; Oosterwoud, Marieke R.; Bornmann, Katrin; Tittel, Jörg; Reemtsma, Thorsten

    2016-04-01

    Increasing concentrations of dissolved organic matter (DOM) in rivers of temperate catchments in Europe and North Amerika impose new technical challenges for drinking water production. The driving factors for this decadal increase in DOM concentration are not conclusive and changes in annual temperatures, precipitation and atmospheric deposition are intensely discussed. It is known that the majority of DOM is released by few but large hydrologic events, mobilizing DOM from riparian wetlands for export by rivers and streams. The mechanisms of this mobilization and the resulting molecular composition of the released DOM may be used to infer long-term changes in the biogeochemistry of the respective catchment. Event-based samples collected over two years from streams in three temperate catchments in the German mid-range mountains were analyzed after solid-phase extraction of DOM for their molecular composition by ultra-high resolution mass spectrometry (FT-ICR MS). Hydrologic conditions, land use and water chemistry parameters were used to complement the molecular analysis. The molecular composition of the riverine DOM was strongly dependent on the magnitude of the hydrologic events, with unsaturated, oxygen-enriched compounds being preferentially mobilized by large events. This pattern is consistent with an increase in dissolved iron and aluminum concentrations. In contrast, the relative proportions of nitrogen and sulfur bearing compounds increased with an increased agricultural land use but were less affected by the mobilization events. Co-precipitation experiments with colloidal aluminum showed that unsaturated and oxygen-rich compounds are preferentially removed from the dissolved phase. The precipitated compounds thus had similar chemical characteristics as compared to the mobilized DOM from heavy rain events. Radiocarbon analyses also indicated that this precipitated fraction of DOM was of comparably young radiocarbon age. DOM radiocarbon from field samples

  12. Missing links in the root-soil organic matter continuum

    SciTech Connect

    O'Brien, Sarah L.; Iversen, Colleen M

    2009-01-01

    The soil environment remains one of the most complex and poorly understood research frontiers in ecology. Soil organic matter (SOM), which spans a continuum from fresh detritus to highly processed, mineral-associated organic matter, is the foundation of sustainable terrestrial ecosystems. Heterogeneous SOM pools are fueled by inputs from living and dead plants, driven by the activity of micro- and mesofauna, and are shaped by a multitude of abiotic factors. The specialization required to measure unseen processes that occur on a wide range of spatial and temporal scales has led to the partitioning of soil ecology research across several disciplines. In the organized oral session 'Missing links in the root-soil organic matter continuum' at the annual Ecological Society of America meeting in Albuquerque, NM, USA, we joined the call for greater communication and collaboration among ecologists who work at the root-soil interface (e.g. Coleman, 2008). Our goal was to bridge the gap between scientific disciplines and to synthesize disconnected pieces of knowledge from root-centric and soil-centric studies into an integrated understanding of belowground ecosystem processes. We focused this report around three compelling themes that arose from the session: (1) the influence of the rhizosphere on SOM cycling, (2) the role of soil heterotrophs in driving the transformation of root detritus to SOM, and (3) the controlling influence of the soil environment on SOM dynamics. We conclude with a discussion of new approaches for gathering data to bridge gaps in the root-SOM continuum and to inform the next generation of ecosystem models. Although leaf litter has often been considered to be the main source of organic inputs to soil, Ann Russell synthesized a convincing body of work demonstrating that roots, rather than surface residues, control the accumulation of SOM in a variety of ecosystems. Living roots, which are chemically diverse and highly dynamic, also influence a wide

  13. Method and apparatus for retorting a substance containing organic matter

    SciTech Connect

    Schulman, B.

    1980-07-01

    A description is given of an apparatus for converting a substance containing organic matter into hydrocarbon vapors and solids residue comprising: (A) a fluidized bed housing having an upstream end and a downstream end; (B) a substantially cylindrical retort, extending through and stationary relative to said fluidized bed housing and having an upstream end and a downstream end, each end being outside of said housing, the longitudinal axis of said retort being substantially parallel to a horizontal plane; (C) feeding means for feeding the substance containing organic matter into said retort, said feeding means communicating with the upstream portion of said retort; (D) means located within said retort for moving the substance containing organic matter from the upstream portion of said retort to the downstream portion thereof; (E) solids residue removing means for removing solids residue from said retort, said solids residue removing means communicating with the downstream portion of said retort; (F) solids residue introducing means for introducing said solids residue removed from said retort into said fluidized bed housing to employ said solids residue as particles of a fluidized bed, one end of said introducing means communicating with said solids residue removing means and the other end therof communicating with the upper upstream portion of said fluidized bed housing; (G) solids residue extracting means for extracting solids residue from said fluidized bed housing and communicating with the lower downstream portion fluidized bed housing; (H) fluidizing menas for maintaining within said fluidized bed housing a fluidized bed of heated particles of solids residue with which to heat said retort; (I) heating means for heating the particles; (J) hydrocarbon vapors removing means.

  14. Priming of soil organic matter decomposition in cryoturbated Arctic soils

    NASA Astrophysics Data System (ADS)

    Richter, A.; Wild, B.; Schnecker, J.; Rusalimova, O.

    2012-12-01

    The Arctic is subjected to particularly high rates of warming, with profound consequences for the carbon cycle: on the one hand plant productivity and C storage in plant biomass have been shown to increase strongly in many parts of the Arctic, on the other hand, increasing rates of soil organic matter (SOM) decomposition have been reported. One of the possibilities that could reconcile these observations is, that increased plant growth may lead to increased root exudation rates, which are known to stimulate microbial turnover of organic matter under certain circumstances, in a process termed "priming" of SOM. Two mechanisms have been brought forward that may be responsible for priming: first, easily assimilable material exuded by plant roots may help microbes to overcome their energy limitation and second, this input of labile carbon could lead to a nitrogen limitation of the microbial community and lead to nitrogen mining, i.e. decomposition of N-rich SOM. We here report on an incubation study with arctic soil investigating potential priming of SOM decomposition in organic topsoil horizons, cryoturbated organic matter and subsoil mineral horizons of tundra soil from the Taymyr peninsula in Siberia. We used arctic soils, that are characterized by cryoturbation (mixing of soil layers due to freezing and thawing), for this study. Turbated cryosols store more than 580 Gt C globally, a significant proportion of which is stored in the cryoturbated organic matter. We hypothesized that an increased availability of labile compounds would increase SOM decomposition rates, and that this effect would be strongest in horizons with a low natural availability of labile C, i.e. in the mineral subsoil. We amended soils with 13C labelled glucose, cellulose, amino acids or proteins, and measured the mineralization of SOM C as well as microbial community composition and potential activities of extracellular enzymes. Our results demonstrate that topsoil organic, cryoturbated and

  15. Persistence of soil organic matter as an ecosystem property

    SciTech Connect

    Schmidt, M.W.; Torn, M. S.; Abiven, S.; Dittmar, T.; Guggenberger, G.; Janssens, I.A.; Kleber, M.; Kögel-Knabner, I.; Lehmann, J.; Manning, D.A.C.; Nannipieri, P.; Rasse, D.P.; Weiner, S.; Trumbore, S.E.

    2011-08-15

    Globally, soil organic matter (SOM) contains more than three times as much carbon as either the atmosphere or terrestrial vegetation. Yet it remains largely unknown why some SOM persists for millennia whereas other SOM decomposes readily—and this limits our ability to predict how soils will respond to climate change. Recent analytical and experimental advances have demonstrated that molecular structure alone does not control SOM stability: in fact, environmental and biological controls predominate. Here we propose ways to include this understanding in a new generation of experiments and soil carbon models, thereby improving predictions of the SOM response to global warming.

  16. Characterization of Biologically Produced Colored Dissolved Organic Matter in Seawater

    DTIC Science & Technology

    2005-11-29

    Seritti, A. Environ. Tech. 1993, 14, 94.1-948. (19) Lombardi, A.T.; Jardim, W.F. Water Research. 1999, 33, 512-520. (20) Parlanti, E .; Morin , B.; Vacher...REPORT DOCUMENTATION PAGE Form Approved Public reporting burden for this collection of I•mo,,ation , e dlat ed to average hour per response. ind•uding... e -mail: drepeta(atwhoi.edu Grant# N00014-98-1-0579 & N00014-03-1-0387 Chromophoric, or colored dissolved organic matter (CDOM), influences the

  17. Aquatic Organic Matter Fluorescence - from phenomenon to application

    NASA Astrophysics Data System (ADS)

    Reynolds, Darren

    2014-05-01

    The use of fluorescence to quantify and characterise aquatic organic matter in river, ocean, ground water and drinking and waste waters has come along way since its discovery as a phenomenon in the early 20th century. For example, there are over 100 papers published each year in international peer reviewed journals, an order of magnitude increase since a decade ago (see Figure taken from ISI database from 1989 to 2007 for publications in the fields of river water and waste water). Since then it has been extensively used as a research tool since the 1990's by scientists and is currently used for a wide variety of applications within a number of sectors. Universities, organisations and companies that research into aquatic organic matter have either recently readily use appropriate fluorescence based techniques and instrumentation. In industry and government, the technology is being taken up by environmental regulators and water and wastewater companies. This keynote presentation will give an overview of aquatic organic matter fluorescence from its conception as a phenomenon through to its current use in a variety of emerging applications within the sectors concerned with understanding, managing and monitoring the aquatic environment. About the Speaker Darren Reynolds pioneered the use of fluorescence spectroscopy for the analysis of wastewaters in the 1990's. He currently leads a research group within the Centre for Research in Biosciences and sits on the Scientific Advisory Board for the Institute of Bio-Sensing Technology at the University of the West of England, Bristol. He is a multidisciplinary scientist concerned with the development of technology platforms for applications in the fields of environment/agri-food and health. His current research interests include the development of optical technologies and techniques for environmental and biological sensing and bio-prospecting applications. He is currently involved in the development and use of synthetic biology

  18. Persistence of soil organic matter as an ecosystem property.

    PubMed

    Schmidt, Michael W I; Torn, Margaret S; Abiven, Samuel; Dittmar, Thorsten; Guggenberger, Georg; Janssens, Ivan A; Kleber, Markus; Kögel-Knabner, Ingrid; Lehmann, Johannes; Manning, David A C; Nannipieri, Paolo; Rasse, Daniel P; Weiner, Steve; Trumbore, Susan E

    2011-10-05

    Globally, soil organic matter (SOM) contains more than three times as much carbon as either the atmosphere or terrestrial vegetation. Yet it remains largely unknown why some SOM persists for millennia whereas other SOM decomposes readily--and this limits our ability to predict how soils will respond to climate change. Recent analytical and experimental advances have demonstrated that molecular structure alone does not control SOM stability: in fact, environmental and biological controls predominate. Here we propose ways to include this understanding in a new generation of experiments and soil carbon models, thereby improving predictions of the SOM response to global warming.

  19. Interactions between organic matter and mineral surfaces along an earthworm invasion gradient in a sugar maple forest of Minnesota

    NASA Astrophysics Data System (ADS)

    Lyttle, A.; Yoo, K.; Aufdenkampe, A. K.; Sebestyen, S. D.; Hale, C.

    2012-12-01

    Sorption of organic matter on mineral surface is critical for protection of organic carbon (C) against decomposition and thus may potentially increase the capacity of soils to store C. Such sorption, however, requires physical contacts between organic matter and available mineral surfaces. This study attempts to better understand how bioturbation by invasive earthworms influences the contacts between organic matter and mineral surface, and affects sorption of organic matter on mineral surface. Vertical soil mixing is a direct consequence of the introduction of invasive earthworms in natural forests previously devoid of native earthworm populations. Here we focus on an intensively studied earthworm invasion chronosequence in a glaciated sugar maple forest in northern Minnesota. With the advance of invasive earthworms, leaf litter disappears while the A horizon expands at the expense of the overlying litter layer and the underlying wind blown silt materials. Earthworms' biomasses and functional group compositions, depth profiles of soil C contents, and total and organic matter-covered mineral surface areas are determined at different stages of invasion. We found that minerals' specific surface areas (SSA) in the A horizons decrease with greater degree of earthworm invasion. Furthermore, less fractions of mineral SSA were found to be coated with organic C in the soils with active earthworm populations. These observations appear to contradict another finding that amounts of crystalline Fe oxide and organically-complexed Fe increase with the greater earthworm population. The overall trend shows that earthworms' active mixing resulting in incorporating silt materials with low SSA from the underlying E horizons to the A horizons. We are currently investigating whether the increased crystalline Fe oxides and organically-complexed Fe pools with increasing earthworm population helped reducing the gradient of overall trend. Our study highlights the importance of earthworm

  20. Correlates of Instrumental and Affective Attachment to Organizations.

    ERIC Educational Resources Information Center

    Angle, Harold L.

    It has been suggested that different forms of organizational commitment have different outcomes as well as different antecedents. To test the hypothesis that instrumental attachment to an organization is associated with members' investments in the organization, and that affective attachment to an organization is influenced primarily by the way the…

  1. Effect of organic fertilizers derived dissolved organic matter on pesticide sorption and leaching.

    PubMed

    Li, Kun; Xing, Baoshan; Torello, William A

    2005-03-01

    Incorporation of organic fertilizers/amendments has been, and continues to be, a popular strategy for golf course turfgrass management. Dissolved organic matter (DOM) derived from these organic materials may, however, facilitate organic chemical movement through soils. A batch equilibrium technique was used to evaluate the effects of organic fertilizer-derived DOM on sorption of three organic chemicals (2,4-D, naphthalene and chlorpyrifos) in USGA (United States Golf Association) sand, a mixed soil (70% USGA sand and 30% native soil) and a silt loam soil (Typic Fragiochrept). DOM was extracted from two commercial organic fertilizers. Column leaching experiments were also performed using USGA sand. Sorption experiments showed that sorption capacity was significantly reduced with increasing DOM concentration in solution for all three chemicals. Column experimental results were consistent with batch equilibrium data. These results suggest that organic fertilizer-derived DOM might lead to enhanced transport of applied chemicals in turf soils.

  2. Do organic matter matter? Contribution of organic matter on scavenging and fractionation of natural radionuclides in the Oceanic Flux Program (OFP) site of Bermuda

    NASA Astrophysics Data System (ADS)

    Chuang, C.; Santschi, P. H.; Conte, M. H.; Schumann, D.; Ayranov, M.

    2012-12-01

    Natural particle-reactive radionuclides, 234Th, 233Pa, 210Po, 210Pb and 7Be, have been used for estimating particulate organic carbon (POC) export flux in the ocean for decades. However, by simply relying on empirically determined isotope ratios to POC and other parameters, sometimes results from field studies are puzzling and become controversial (e.g., one is summarized in Li, 2005). The picture becomes clearer when it was noticed that a missing fraction, e.g., natural organic matter, could be the cause. For example, a series of field and lab studies demonstrated that biopolymers excreted by marine micro-organisms are likely carrier molecules for a number of these isotopes (e.g., Guo et al., 2002; Quigley et al., 2002; Santschi et al., 2003; Roberts et al., 2009; Hung et al., 2010; Xu et al., 2011; Hung et al., 2012; Yang et al., 2012). To examine the effect of organic composition of the particle on the scavenging and fractionation of selected natural radionuclides (e.g., Th, Pa, Pb, Po, Be), organic composition (e.g., protein, polysaccharides, uronic acid, siderophore and amino acid contents, and etc.) and particle-water partition coefficients (Kd) were determined for sediment trap material collected in the Oceanic Flux Program (OFP) site of Bermuda (500, 1500 and 3200 m). Results showed that different organic components contribute differently to the fractionation of different radionuclides from the three depths. We conclude that natural organic matter control on the particle-water partition coefficients cannot be ignored.

  3. Influence of Organic Matter - Mineral Interfacial Reactions on Metal(loid) Speciation and Bioaccessibility

    NASA Astrophysics Data System (ADS)

    Chorover, J.; Kong, S.; Root, R. A.; Thomas, A.

    2015-12-01

    Bioaccessibility of contaminant metals in geomedia is often measured on the basis of kinetic release to solution during in vitro reaction with biofluid simulants. We postulate that development of a predictive-mechanistic understanding of bioaccessibility requires knowledge of metal(loid) molecular speciation upon sample introduction, as well as its change over the course of the in vitro reaction. Our results - including data from batch, column, mesocosm and field studies pertaining to arsenic, lead, and zinc contaminated materials - indicate the strong influence of organic matter and associated biological activity on metal(loid) speciation in mine tailings and related model systems. Furthermore, presence/absence of organic matter during bioassays affects the kinetics of metal(loid) release into biofluid simulants through multiple mechanisms.

  4. Effect of crab bioturbation on organic matter processing in South West Atlantic intertidal sediments

    NASA Astrophysics Data System (ADS)

    Fanjul, Eugenia; Escapa, Mauricio; Montemayor, Diana; Addino, Mariana; Alvarez, María Fernanda; Grela, María A.; Iribarne, Oscar

    2015-01-01

    Organic matter (OM) remineralization plays a key role in controlling the biogeochemistry of marine sediments. Through their burrowing activities, bioturbating macrofauna not only induces physical, chemical and biological modifications, which can affect microbial communities responsible for organic matter remineralization, but it could also directly affect the distribution and bioavailability of sedimentary organic matter. Through in situ experiments manipulating crab and burrow density in intertidal soft-bottoms, we assessed if crab-bioturbation affects benthic metabolism, and the amount, distribution, and bioavailability of sedimentary OM. Crab-bioturbation enhanced overall benthic metabolism and benthic flux of dissolved OM toward the water column at both mudflat and saltmarsh zones. Moreover, our results revealed that bioturbation also changes the quality, bioavailability and distribution of sedimentary OM in mudflats and saltmarshes. Overall, bioturbation enhanced the proportion of labile organic carbon of bioturbated sediments and homogenized the sediment column in terms of their proportion of labile organic carbon. However, crabs also generated biogenic structures (e.g., mounds) that could promote spatial heterogeneity of high nutritional-value OM. Bioturbation-induced changes on benthic metabolism and on OM availability would result in a reduction of the storage capacity of carbon in our intertidal systems. Previous works indicated that crab-burrows trap detritus and OM-rich sediments. Our results suggest that detritus are efficiently remineralized at bioturbated sediment, and finally they are quickly exported to the water column as CO2 and DOC. Thus, crabs are modifying the OM processing at intertidal soft bottoms, and the ways in which carbon is exported to coastal waters.

  5. Glacier inputs influence organic matter composition and prokaryotic distribution in a high Arctic fjord (Kongsfjorden, Svalbard)

    NASA Astrophysics Data System (ADS)

    Bourgeois, Solveig; Kerhervé, Philippe; Calleja, Maria Ll.; Many, Gaël; Morata, Nathalie

    2016-12-01

    With climate change, the strong seasonality and tight pelagic-benthic coupling in the Arctic is expected to change in the next few decades. It is currently unclear how the benthos will be affected by changes of environmental conditions such as supplies of organic matter (OM) from the water column. In the last decade, Kongsfjorden (79°N), a high Arctic fjord in Svalbard influenced by several glaciers and Atlantic water inflow, has been a site of great interest owing to its high sensitivity to climate change, evidenced by a reduction in ice cover and an increase in melting freshwater. To investigate how spatial and seasonal changes in vertical fluxes can impact the benthic compartment of Kongsfjorden, we studied the organic matter characteristics (in terms of quantity and quality) and prokaryotic distribution in sediments from 3 stations along a transect extending from the glacier into the outer fjord in 4 different seasons (spring, summer, autumn and winter) in 2012-2013. The biochemical parameters used to describe the sedimentary organic matter were organic carbon (OC), total nitrogen, bulk stable isotope ratios, pigments (chorophyll-a and phaeopigments) and biopolymeric carbon (BPC), which is the sum of the main macromolecules, i.e. lipids, proteins and carbohydrates. Prokaryotic abundance and distribution were estimated by 4‧,6-diamidino-2-phenylindole (DAPI) staining. This study identifies a well-marked quantitative gradient of biogenic compounds throughout all seasons and also highlights a discrepancy between the quantity and quality of sedimentary organic matter within the fjord. The sediments near the glacier were organic-poor (< 0.3%OC), however the high primary productivity in the water column displayed during spring was reflected in summer sediments, and exhibited higher freshness of material at the inner station compared to the outer basin (means C-chlorophyll-a/OC 5 and 1.5%, respectively). However, sediments at the glacier front were depleted in BPC

  6. Overestimation of Crop Root Biomass in Field Experiments Due to Extraneous Organic Matter

    PubMed Central

    Hirte, Juliane; Leifeld, Jens; Abiven, Samuel; Oberholzer, Hans-Rudolf; Hammelehle, Andreas; Mayer, Jochen

    2017-01-01

    Root biomass is one of the most relevant root parameters for studies of plant response to environmental change, soil carbon modeling or estimations of soil carbon sequestration. A major source of error in root biomass quantification of agricultural crops in the field is the presence of extraneous organic matter in soil: dead roots from previous crops, weed roots, incorporated above ground plant residues and organic soil amendments, or remnants of soil fauna. Using the isotopic difference between recent maize root biomass and predominantly C3-derived extraneous organic matter, we determined the proportions of maize root biomass carbon of total carbon in root samples from the Swiss long-term field trial “DOK.” We additionally evaluated the effects of agricultural management (bio-organic and conventional), sampling depth (0–0.25, 0.25–0.5, 0.5–0.75 m) and position (within and between maize rows), and root size class (coarse and fine roots) as defined by sieve mesh size (2 and 0.5 mm) on those proportions, and quantified the success rate of manual exclusion of extraneous organic matter from root samples. Only 60% of the root mass that we retrieved from field soil cores was actual maize root biomass from the current season. While the proportions of maize root biomass carbon were not affected by agricultural management, they increased consistently with soil depth, were higher within than between maize rows, and were higher in coarse (>2 mm) than in fine (≤2 and >0.5) root samples. The success rate of manual exclusion of extraneous organic matter from root samples was related to agricultural management and, at best, about 60%. We assume that the composition of extraneous organic matter is strongly influenced by agricultural management and soil depth and governs the effect size of the investigated factors. Extraneous organic matter may result in severe overestimation of recovered root biomass and has, therefore, large implications for soil carbon modeling and

  7. Overestimation of Crop Root Biomass in Field Experiments Due to Extraneous Organic Matter.

    PubMed

    Hirte, Juliane; Leifeld, Jens; Abiven, Samuel; Oberholzer, Hans-Rudolf; Hammelehle, Andreas; Mayer, Jochen

    2017-01-01

    Root biomass is one of the most relevant root parameters for studies of plant response to environmental change, soil carbon modeling or estimations of soil carbon sequestration. A major source of error in root biomass quantification of agricultural crops in the field is the presence of extraneous organic matter in soil: dead roots from previous crops, weed roots, incorporated above ground plant residues and organic soil amendments, or remnants of soil fauna. Using the isotopic difference between recent maize root biomass and predominantly C3-derived extraneous organic matter, we determined the proportions of maize root biomass carbon of total carbon in root samples from the Swiss long-term field trial "DOK." We additionally evaluated the effects of agricultural management (bio-organic and conventional), sampling depth (0-0.25, 0.25-0.5, 0.5-0.75 m) and position (within and between maize rows), and root size class (coarse and fine roots) as defined by sieve mesh size (2 and 0.5 mm) on those proportions, and quantified the success rate of manual exclusion of extraneous organic matter from root samples. Only 60% of the root mass that we retrieved from field soil cores was actual maize root biomass from the current season. While the proportions of maize root biomass carbon were not affected by agricultural management, they increased consistently with soil depth, were higher within than between maize rows, and were higher in coarse (>2 mm) than in fine (≤2 and >0.5) root samples. The success rate of manual exclusion of extraneous organic matter from root samples was related to agricultural management and, at best, about 60%. We assume that the composition of extraneous organic matter is strongly influenced by agricultural management and soil depth and governs the effect size of the investigated factors. Extraneous organic matter may result in severe overestimation of recovered root biomass and has, therefore, large implications for soil carbon modeling and estimations

  8. Laughing matters: Infant humor in the context of parental affect.

    PubMed

    Mireault, Gina C; Crockenberg, Susan C; Sparrow, John E; Cousineau, Kassandra; Pettinato, Christine; Woodard, Kelly

    2015-08-01

    Smiling and laughing appear very early during the first year of life, but little is known about how infants come to appraise a stimulus as humorous. This short-term longitudinal study explored infant humor perception from 5 to 7 months of age as a function of parental affect during an absurd event. Using a within-participants design, parents alternated smiling/laughing with emotional neutrality while acting absurdly toward their infants. Group comparisons showed that infants (N = 37) at all ages smiled at the event regardless of parental affect but did so significantly longer at 5 and 6 months, and more often and sooner at 7 months, when parents provided humor cues. Similarly, sequential analyses revealed that after gazing at the event, 7-month-olds were more likely to smile at it only when parents provided humor cues and were comparatively more likely to look away when parents were neutral. Thus, starting at 5 months of age, parental affect influenced infants' affect toward an absurd event, an effect that was magnified at 7 months. These results are discussed in the context of emotional contagion, regulation, and the emergence of social referencing.

  9. Laughing Matters: Infant Humor in the Context of Parental Affect

    PubMed Central

    Mireault, Gina C.; Crockenberg, Susan C.; Sparrow, John E.; Cousineau, Kassandra; Pettinato, Christine; Woodard, Kelly

    2015-01-01

    Smiling and laughing appear very early in the first year, but little is known about how infants come to appraise a stimulus as humorous. This short-term longitudinal study explored infant humor perception from 5- to 7-months as a function of parental affect during an absurd event. Using a within-subjects design, parents alternated smiling/laughing with emotional neutrality while acting absurdly toward their infants. Group comparisons showed that infants (N = 37) at all ages smiled at the event regardless of parental affect, but significantly longer at 5 and 6 months , and more often and sooner at 7 months when parents provided humor cues. Similarly, sequential analyses revealed that after gazing at the event, 7-month-olds were only more likely to smile at it when parents provided humor cues, and were comparatively more likely to look away when parents were neutral. Thus, starting at 5 months, parental affect influenced infants’ affect toward an absurd event, an effect that was magnified at 7 months. These results are discussed in the context of emotional contagion, regulation, and the emergence of social referencing. PMID:25897958

  10. Influence of dissolved organic carbon content on modelling natural organic matter acid-base properties.

    PubMed

    Garnier, Cédric; Mounier, Stéphane; Benaïm, Jean Yves

    2004-10-01

    Natural organic matter (NOM) behaviour towards proton is an important parameter to understand NOM fate in the environment. Moreover, it is necessary to determine NOM acid-base properties before investigating trace metals complexation by natural organic matter. This work focuses on the possibility to determine these acid-base properties by accurate and simple titrations, even at low organic matter concentrations. So, the experiments were conducted on concentrated and diluted solutions of extracted humic and fulvic acid from Laurentian River, on concentrated and diluted model solutions of well-known simple molecules (acetic and phenolic acids), and on natural samples from the Seine river (France) which are not pre-concentrated. Titration experiments were modelled by a 6 acidic-sites discrete model, except for the model solutions. The modelling software used, called PROSECE (Programme d'Optimisation et de SpEciation Chimique dans l'Environnement), has been developed in our laboratory, is based on the mass balance equilibrium resolution. The results obtained on extracted organic matter and model solutions point out a threshold value for a confident determination of the studied organic matter acid-base properties. They also show an aberrant decreasing carboxylic/phenolic ratio with increasing sample dilution. This shift is neither due to any conformational effect, since it is also observed on model solutions, nor to ionic strength variations which is controlled during all experiments. On the other hand, it could be the result of an electrode troubleshooting occurring at basic pH values, which effect is amplified at low total concentration of acidic sites. So, in our conditions, the limit for a correct modelling of NOM acid-base properties is defined as 0.04 meq of total analysed acidic sites concentration. As for the analysed natural samples, due to their high acidic sites content, it is possible to model their behaviour despite the low organic carbon concentration.

  11. [Distribution characteristics of soil pH, CEC and organic matter in a small watershed of the Loess Plateau].

    PubMed

    Wei, Xiao-Rong; Shao, Ming-An

    2009-11-01

    Soil chemical properties play important roles in soil ecological functioning. In this study, 207 surface soil (0-20 cm) samples were collected from different representative landscape units in a gully watershed of the Loess Plateau to examine the distribution characteristics of soil pH, cation exchange capacity (CEC) and organic matter, and their relations to land use type, landform, and soil type. The soil pH, CEC and organic matter content ranged from 7.7 to 8.6, 11.9 to 28.7 cmol x kg(-1), and 3.0 to 27.9 g x kg(-1), and followed normal distribution, log-normal distribution, and negative binomial distribution, respectively. These three properties were significantly affected by land use type, landform, and soil type. Soil CEC and organic matter content were higher in forestland, grassland and farmland than in orchard land, and soil pH was lower in forestland than in other three land use types. Soil pH, CEC and organic matter content were higher in plateau land and sloping land than in gully bottom and terrace land. Soil CEC and organic matter content were higher in dark loessial soil and rebified soil, while soil pH was higher in yellow loessial soil. Across all the three landscape factors, soil CEC and organic matter content showed the similar distribution pattern, but an opposite distribution pattern was observed for soil pH.

  12. Impact of water abstraction on storage and breakdown of coarse organic matter in mountain streams.

    PubMed

    Arroita, Maite; Aristi, Ibon; Díez, Joserra; Martinez, Miren; Oyarzun, Gorka; Elosegi, Arturo

    2015-01-15

    Water abstraction is a prevalent impact in streams and rivers, which is likely to increase in the near future. Because abstraction reduces discharge, the dimensions of the wetted channel and water depth and velocity, it can have strong influence on stream ecosystem functioning. Although the impacts of large dams on stream and river ecosystems are pretty well known, the effects of diversion schemes associated with low dams are still poorly understood. Furthermore, the remote location of many diversion schemes and the lack of collaboration by power companies often make it difficult to know the volume of water diverted and its environmental consequences. To assess the impact of water abstraction on the storage and breakdown of coarse particulate organic matter in streams we compared reaches upstream and downstream from five low dams that divert water to hydropower plants in mountain streams in N Spain. We measured the storage of organic matter and the breakdown of alder leaves in winter and spring, and calculated the results at the patch (i.e., per square meter of bed) and at the reach scale (i.e., per lineal meter of channel). Water diversion significantly reduced discharge, and the width and depth of the wetted channel, but did not affect water quality. Diversion significantly reduced the storage and breakdown of organic matter in winter but not in spring. The number of shredders colonizing litter bags was also significantly reduced. The results point to an important effect of water abstraction on the storage and breakdown of organic matter in streams at least in some periods, which could affect downstream reaches, global carbon fluxes, and associated ecosystem services.

  13. The abiotic degradation of soil organic matter to oxalic acid

    NASA Astrophysics Data System (ADS)

    Studenroth, Sabine; Huber, Stefan; Schöler, H. F.

    2010-05-01

    The abiotic degradation of soil organic matter to volatile organic compounds was studied intensely over the last years (Keppler et al., 2000; Huber et al., 2009). It was shown that soil organic matter is oxidised due to the presence of iron (III), hydrogen peroxide and chloride and thereby produces diverse alkyl halides, which are emitted into the atmosphere. The formation of polar halogenated compounds like chlorinated acetic acids which are relevant toxic environmental substances was also found in soils and sediments (Kilian et al., 2002). The investigation of the formation of other polar halogenated and non-halogenated compounds like diverse mono- and dicarboxylic acids is going to attain more and more importance. Due to its high acidity oxalic acid might have impacts on the environment e.g., nutrient leaching, plant diseases and negative influence on microbial growth. In this study, the abiotic formation of oxalic acid in soil is examined. For a better understanding of natural degradation processes mechanistic studies were conducted using the model compound catechol as representative for structural elements of the humic substances and its reaction with iron (III) and hydrogen peroxide. Iron is one of the most abundant elements on earth and hydrogen peroxide is produced by bacteria or through incomplete reduction of oxygen. To find suitable parameters for an optimal reaction and a qualitative and quantitative analysis method the following reaction parameters are varied: concentration of iron (III) and hydrogen peroxide, time dependence, pH-value and influence of chloride. Analysis of oxalic acid was performed employing an ion chromatograph equipped with a conductivity detector. The time dependent reaction shows a relatively fast formation of oxalic acid, the optimum yield is achieved after 60 minutes. Compared to the concentration of catechol an excess of hydrogen peroxide as well as a low concentration of iron (III) are required. In absence of chloride the

  14. Importance of soil organic matter for the diversity of microorganisms involved in the degradation of organic pollutants

    PubMed Central

    Neumann, Dominik; Heuer, Anke; Hemkemeyer, Michael; Martens, Rainer; Tebbe, Christoph C

    2014-01-01

    Many organic pollutants are readily degradable by microorganisms in soil, but the importance of soil organic matter for their transformation by specific microbial taxa is unknown. In this study, sorption and microbial degradation of phenol and 2,4-dichlorophenol (DCP) were characterized in three soil variants, generated by different long-term fertilization regimes. Compared with a non-fertilized control (NIL), a mineral-fertilized NPK variant showed 19% and a farmyard manure treated FYM variant 46% more soil organic carbon (SOC). Phenol sorption declined with overall increasing SOC because of altered affinities to the clay fraction (soil particles <2 mm in diameter). In contrast, DCP sorption correlated positively with particulate soil organic matter (present in the soil particle fractions of 63–2000 μm). Stable isotope probing identified Rhodococcus, Arthrobacter (both Actinobacteria) and Cryptococcus (Basidiomycota) as the main degraders of phenol. Rhodococcus and Cryptococcus were not affected by SOC, but the participation of Arthrobacter declined in NPK and even more in FYM. 14C-DCP was hardly metabolized in the NIL variant, more efficiently in FYM and most in NPK. In NPK, Burkholderia was the main degrader and in FYM Variovorax. This study demonstrates a strong effect of SOC on the partitioning of organic pollutants to soil particle size fractions and indicates the profound consequences that this process could have for the diversity of bacteria involved in their degradation. PMID:24430482

  15. Importance of soil organic matter for the diversity of microorganisms involved in the degradation of organic pollutants.

    PubMed

    Neumann, Dominik; Heuer, Anke; Hemkemeyer, Michael; Martens, Rainer; Tebbe, Christoph C

    2014-06-01

    Many organic pollutants are readily degradable by microorganisms in soil, but the importance of soil organic matter for their transformation by specific microbial taxa is unknown. In this study, sorption and microbial degradation of phenol and 2,4-dichlorophenol (DCP) were characterized in three soil variants, generated by different long-term fertilization regimes. Compared with a non-fertilized control (NIL), a mineral-fertilized NPK variant showed 19% and a farmyard manure treated FYM variant 46% more soil organic carbon (SOC). Phenol sorption declined with overall increasing SOC because of altered affinities to the clay fraction (soil particles <2 mm in diameter). In contrast, DCP sorption correlated positively with particulate soil organic matter (present in the soil particle fractions of 63-2000 μm). Stable isotope probing identified Rhodococcus, Arthrobacter (both Actinobacteria) and Cryptococcus (Basidiomycota) as the main degraders of phenol. Rhodococcus and Cryptococcus were not affected by SOC, but the participation of Arthrobacter declined in NPK and even more in FYM. (14)C-DCP was hardly metabolized in the NIL variant, more efficiently in FYM and most in NPK. In NPK, Burkholderia was the main degrader and in FYM Variovorax. This study demonstrates a strong effect of SOC on the partitioning of organic pollutants to soil particle size fractions and indicates the profound consequences that this process could have for the diversity of bacteria involved in their degradation.

  16. Nature and transformation of dissolved organic matter in treatment wetlands.

    PubMed

    Barber, L B; Leenheer, J A; Noyes, T I; Stiles, E A

    2001-12-15

    This investigation into the occurrence, character, and transformation of dissolved organic matter (DOM) in treatment wetlands in the western United States shows that (i) the nature of DOM in the source water has a major influence on transformations that occur during treatment, (ii) the climate factors have a secondary effect on transformations, (iii) the wetlands receiving treated wastewater can produce a net increase in DOM, and (iv) the hierarchical analytical approach used in this study can measure the subtle DOM transformations that occur. As wastewater treatment plant effluent passes through treatment wetlands, the DOM undergoes transformation to become more aromatic and oxygenated. Autochthonous sources are contributed to the DOM, the nature of which is governed by the developmental stage of the wetland system as well as vegetation patterns. Concentrations of specific wastewater-derived organic contaminants such as linear alkylbenzene sulfonate, caffeine, and ethylenediaminetetraacetic acid were significantly attenuated by wetland treatment and were not contributed by internal loading.

  17. Morphological Study of Insoluble Organic Matter Residues from Primitive

    NASA Technical Reports Server (NTRS)

    Changela, H. G.; Stroud, R. M.; Peeters, Z.; Nittler, L. R.; Alexander, C. M. O'D.; DeGregorio, B. T.; Cody, G. D.

    2012-01-01

    Insoluble organic matter (IOM) constitutes a major proportion, 70-99%, of the total organic carbon found in primitive chondrites [1, 2]. One characteristic morphological component of IOM is nanoglobules [3, 4]. Some nanoglobules exhibit large N-15 and D enrichments relative to solar values, indicating that they likely originated in the ISM or the outskirts of the protoplanetary disk [3]. A recent study of samples from the Tagish Lake meteorite with varying levels of hydrothermal alteration suggest that nanoglobule abundance decreases with increasing hydrothermal alteration [5]. The aim of this study is to further document the morphologies of IOM from a range of primitive chondrites in order to determine any correlation of morphology with petrographic grade and chondrite class that could constrain the formation and/or alteration mechanisms.

  18. Nature and transformation of dissolved organic matter in treatment wetlands

    USGS Publications Warehouse

    Barber, L.B.; Leenheer, J.A.; Noyes, T.I.; Stiles, E.A.

    2001-01-01

    This investigation into the occurrence, character, and transformation of dissolved organic matter (DOM) in treatment wetlands in the western United States shows that (i) the nature of DOM in the source water has a major influence on transformations that occur during treatment, (ii) the climate factors have a secondary effect on transformations, (iii) the wetlands receiving treated wastewater can produce a net increase in DOM, and (iv) the hierarchical analytical approach used in this study can measure the subtle DOM transformations that occur. As wastewater treatment plant effluent passes through treatment wetlands, the DOM undergoes transformation to become more aromatic and oxygenated. Autochthonous sources are contributed to the DOM, the nature of which is governed by the developmental stage of the wetland system as well as vegetation patterns. Concentrations of specific wastewaterderived organic contaminants such as linear alkylbenzene sulfonate, caffeine, and ethylenediaminetetraacetic acid were significantly attenuated by wetland treatment and were not contributed by internal loading.

  19. Carbon isotope fractionation of sapropelic organic matter during early diagenesis

    USGS Publications Warehouse

    Spiker, E. C.; Hatcher, P.G.

    1984-01-01

    Study of an algal, sapropelic sediment from Mangrove Lake, Bermuda shows that the mass balance of carbon and stable carbon isotopes in the major organic constituents is accounted for by a relatively straightforward model of selective preservation during diagenesis. The loss of 13C-enriched carbohydrates is the principal factor controlling the intermolecular mass balance of 13C in the sapropel. Results indicate that labile components are decomposed leaving as a residual concentrate in the sediment an insoluble humic substance that may be an original biochemical component of algae and associated bacteria. An overall decrease of up to about 4??? in the ?? 13C values of the organic matter is observed as a result of early diagenesis. ?? 1984.

  20. Literature review of organic matter transport from marshes

    NASA Technical Reports Server (NTRS)

    Dow, D. D.

    1982-01-01

    A conceptual model for estimating a transport coefficient for the movement of nonliving organic matter from wetlands to the adjacent embayments was developed in a manner that makes it compatible with the Earth Resources Laboratory's Productive Capacity Model. The model, which envisages detritus movement from wetland pixels to the nearest land-water boundary followed by movement within the water column from tidal creeks to the adjacent embayment, can be transposed to deal with only the interaction between tidal water and the marsh or to estimate the transport from embayments to the adjacent coastal waters. The outwelling hypothesis postulated wetlands as supporting coastal fisheries either by exporting nutrients, such as inorganic nitrogen, which stimulated the plankton-based grazing food chain in the water column, or through the export of dissolved and particulate organic carbon which provided a benthic, detritus-based food web which provides the food source for the grazing food chain in a more indirect fashion.

  1. Dissolved Organic Matter in the Yukon River Basin

    NASA Astrophysics Data System (ADS)

    Aiken, G.; Striegl, R.; Schuster, P.

    2004-12-01

    Source materials, watershed geochemistry, oxidative processes and hydrology exert strong influences on the nature and reactivity of dissolved organic matter (DOM) in aquatic systems. At present, a critical question in carbon cycling is how climate change could alter the fate and chemical nature of dissolved organic carbon (DOC) released from watersheds, particularly those underlain by permafrost, and transported to rivers, lakes, estuaries and coastal waters. The spatial and temporal variability of DOM in surface waters associated with the Yukon River are being studied to better define processes controlling DOM in this system. Like many northern ecosystems, the Yukon River Basin is experiencing melting permafrost, drying of upland soils and changing wetland environments. Study results indicate that the transport of DOM in the river and its major tributaries is strongly seasonally dependent. Specific ultraviolet absorbance (SUVA) data, an excellent indicator of aromatic carbon content of DOM, also indicate a large variation in the chemical nature of the organic matter transported by the river. Lowest DOC concentrations and SUVA values were observed for samples collected in the winter under low flow conditions and for tributaries dominated by ground water inputs. Greatest DOC concentrations and SUVA values were measured on samples collected during the spring on the leading part of the hydrograph. High SUVA values are indicative of greater amounts of organic material originating from higher plants that are present in upper soil horizons and wetlands of the watershed. Aquatic humic substances collected from the Yukon River during the snowmelt period were found to have low nitrogen contents and greater amounts of aromatic C relative to samples from other aquatic environments. Low N content and high aromaticity are indicative of humic substances evolved from higher plant sources with little alteration resulting from microbial degradation or soil interactions. In addition

  2. The role of fungi for carbon decomposition in soils of different structure and fresh organic matter content

    NASA Astrophysics Data System (ADS)

    Schmidt, Sonja; Chenu, Claire; Falconer, Ruth; Geradin, Cyril; Nunan, Naoise; Otten, Wilfred; Pouteau, Valerie

    2014-05-01

    Sequestration of C in soils has a major influence on climate change. Fungi play an important role in carbon decomposition and sequestration but the effect of soil structure and input of fresh organic matter (particulate organic matter POM) is still unclear. Fungi is predominant involved in cellulose decomposition and the priming effect (PE) where old SOM is decomposed by using fresh carbon as a source of energy. Information on how soil structure affects colonisation and decomposition of POM and SOM by fungi could help to get explain processes involved in carbon sequestration and CO2respiration. The objective of this study was to get a better understanding on the involvement of fungi in CO2 emissions arising from soils and to gain information on what factors in the soil are driving organic matter (OM) decomposition. Experimental data on fungal growth and carbon decomposition as affected by POM abundance and soil structure were obtained. Sterilised maize straw (1-2 mm2) and soil (

  3. Dissolved organic matter photolysis in Canadian arctic thaw ponds

    NASA Astrophysics Data System (ADS)

    Laurion, Isabelle; Mladenov, Natalie

    2013-09-01

    The abundant thaw lakes and ponds in the circumarctic receive a new pool of organic carbon as permafrost peat soils degrade, which can be exposed to significant irradiance that potentially increases as climate warms and ice cover shortens. Exposure to sunlight is known to accelerate the transformation of dissolved organic matter (DOM) into molecules that can be more readily used by microbes. We sampled the water from two common classes of ponds found in the ice-wedge system of continuous permafrost regions of Canada, polygonal and runnel ponds, and followed the transformation of DOM over 12 days by looking at dissolved organic carbon (DOC) concentration and DOM absorption and fluorescence properties. The results indicate a relatively fast decay of color (3.4 and 1.6% loss d-1 of absorption at 320 nm for the polygonal and runnel pond, respectively) and fluorescence (6.1 and 8.3% loss d-1 of total fluorescent components, respectively) at the pond surface, faster in the case of humic-like components, but insignificant losses of DOC over the observed period. This result indicates that direct DOM mineralization (photochemical production of CO2) is apparently minor in thaw ponds compared to the photochemical transformation of DOM into less chromophoric and likely more labile molecules with a greater potential for microbial mineralization. Therefore, DOM photolysis in arctic thaw ponds can be considered as a catalytic mechanism, accelerating the microbial turnover of mobilized organic matter from thawing permafrost and the production of greenhouse gases, especially in the most shallow ponds. Under a warming climate, this mechanism will intensify as summers lengthen.

  4. Temperature and organic matter controls on hyporheic greenhouse gas production

    NASA Astrophysics Data System (ADS)

    Comer-Warner, S.; Romeijn, P.; Krause, S.; Hannah, D. M.; Gooddy, D.

    2016-12-01

    The region of groundwater and surface water mixing, known as the hyporheic zone, has recently attracted interest as an area of greenhouse gas (GHG) production. Although high concentrations of GHG have been found in these environments, the drivers of hyporheic GHG production remain poorly understood. Here we present the results of a microcosm incubation experiment, designed to determine the effect of multiple environmental parameters on GHG production. Three sediment types, representing a gradient of organic matter contents, from two contrasting UK lowland rivers (sandstone and chalk), were incubated for 29 hours. Experiments were performed at five temperature treatments between 5 and 25°C, and the microbial metabolism of each microcosm was determined using the smart tracer Resazurin. Headspace concentrations of carbon dioxide, methane and nitrous oxide were measured to determine the effect of these environmental parameters on GHG production, and establish their roles as drivers of GHG production in the hyporheic zone. Our results indicate strong temperature controls of GHG production, overlapping with the observed impacts of varying organic matter content of different sediments. Experimental findings indicate that increased hyporheic temperatures during increasing baseflow and drought conditions may significantly enhance sediment respiration, and thus, GHG emissions from the streambed interface. This research advances understanding of drivers of whole stream carbon and nitrogen budgets, as well as the role of groundwater-surface water interfaces in GHG emissions, and allows the interaction of these controls to be assessed.

  5. Speciation of The Particulate Organic Matter In Three Remote Areas

    NASA Astrophysics Data System (ADS)

    Masclet, Pierre; Marchand, Nicolas; Jaffrezo, Jean Luc; Besombes, Jean Luc

    Total particulate matter was collected as part of three programs between 1999 and 2001 (EAAS in Finland, ESOMPTE in Marseille/Fos and POVA in french alpine valleys). The speciation of the particulate organic matter (POM) was performed by Gas Chromatography or HPLC coupled with a mass spectrometer. 13 organic families were identified in the 245 samples collected. The presence of some functional groups (- COOH; - OH and - CHO) and the carbon chain length are used in order to identify the sources of the particulate pollutants and the physicochemical behaviour during the long range atmospheric transport of the aerosol. The composition of the POM differs depending on the season (the secondary fraction reaches 27 % in summer and only 6% in winter) and on the remoteness of the sources. Alkanes are always the most abundant compounds. Polycyclic aromatic hydrocarbons, alcohols, esters, carboxylic acids and monoaromatic hydrocarbons are present in significant abundance. Some alkenes, aldehydes, ether oxydes, ketones and halocompounds are also found. Alcohols are more abundant in aerosols collected close to marine sites. Long carbon chain esters are mostly found in aerosols collected in high density vegetation areas and relatively high concentrations of PAH are measured in aerosols collected close to highly populated areas. These three families are good geochemical tracers, respectively of marine, biogenic and anthropic sources.

  6. Wastewater disinfection and organic matter removal using ferrate (VI) oxidation.

    PubMed

    Bandala, Erick R; Miranda, Jocelyn; Beltran, Margarita; Vaca, Mabel; López, Raymundo; Torres, Luis G

    2009-09-01

    The use of iron in a +6 valence state, (Fe (VI), as FeO4(-2)) was tested as a novel alternative for wastewater disinfection and decontamination. The removal of organic matter (OM) and index microorganisms present in an effluent of a wastewater plant was determined using FeO4(-2) without any pH adjustment. It was observed that concentrations of FeO4(-2) ranging between 5 and 14 mg l(-1) inactivated up to 4-log of the index microorganisms (initial concentration c.a. 10(6) CFU/100 ml) and achieved OM removal up to almost 50%. The performance of FeO4(-2) was compared with OM oxidation and disinfection using hypochlorite. It was observed that hypochlorite was less effective in OM oxidation and coliform inactivation than ferrate. Results of this work suggest that FeO4(-2) could be an interesting oxidant able to deactivate pathogenic microorganisms in water with high OM content and readily oxidize organic matter without jeopardizing its efficiency on microorganism inactivation.

  7. Black Carbon - Soil Organic Matter abiotic and biotic interactions

    NASA Astrophysics Data System (ADS)

    Cotrufo, Francesca; Boot, Claudia; Denef, Karolien; Foster, Erika; Haddix, Michelle; Jiang, Xinyu; Soong, Jennifer; Stewart, Catherine

    2014-05-01

    Wildfires, prescribed burns and the use of char as a soil amendment all add large quantities of black carbon to soils, with profound, yet poorly understood, effects on soil biology and chemical-physical structure. We will present results emerging from our black carbon program, which addresses questions concerning: 1) black carbon-soil organic m