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Sample records for african rift valleys

  1. East African Rift Valley, Kenya

    NASA Technical Reports Server (NTRS)

    1990-01-01

    This rare, cloud free view of the East African Rift Valley, Kenya (1.5N, 35.5E) shows a clear view of the Turkwell River Valley, an offshoot of the African REift System. The East African Rift is part of a vast plate fracture which extends from southern Turkey, through the Red Sea, East Africa and into Mozambique. Dark green patches of forests are seen along the rift margin and tea plantations occupy the cooler higher ground.

  2. Vector Competence of Selected African Mosquito (Diptera: Culicidae) Species for Rift Valley Fever Virus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Outbreaks of Rift Valley fever (RVF) in Egypt, Yemen, and Saudi Arabia have indicated the potential for this disease to spread from its enzootic areas in sub-Saharan Africa. Because little is known about the potential for most African mosquito species to transmit RVF virus (RVFV), we conducted stud...

  3. The Rift Valley of African Plate in Elasto-Plastic Creeping over Magma Motion

    NASA Astrophysics Data System (ADS)

    Nakamura, Shigehisa

    2016-04-01

    This is a brief note to a problem on the Rift Valley in the eastern Africa. It is said that this valley was formed in an age 20,000,000 years before present though the valley is yet continuing to move eastward at an annual rate of about 5 cm/year in a geographical trend. Adding to some of the scientists tell that the separation threat of the easternAfrica from the mother land of the Africa under the effect of African crust motion over the magma. However, it is now geological understanding that the land of the Africa has been kept its basic coastal configulation in geographic pattern since the time more than 20,000,000 years before present. Sothat, it is hard to consider the above noted African land separation by part could be in the next age in a time scale of 20,000,000 years. As far as, we concern the geographic data obtaoned by the ground based survey of the African typical mountain peaks, the highest mountain peak 5885m (in 1980) is for Kilimanjaro, Kibo Peak though one of the scientific almanacs tells us its peak height as 5890m (in 2009). As for the Mount Kenia, the peak height is as 5199m (in 1980) and 5200m(in 2009). At a glance, it looks to be a trend in altimetry of the African typical mountain. Now, what trends are noted for the peak heights could be taken to suggesting the geological activity on the earth surface to maintain in a spherical shape approximately on the orbit around the Sun. In these several ten years, the digitizing of the data has been promoted even for the topographic patterns on the earth though its time scaling is extremely short comparing to the geological time scaling. Now, it should be found what is effective to monitor any trends of the African crust in motion as well as variations of the mountain peaks.

  4. East African Rift

    NASA Technical Reports Server (NTRS)

    2008-01-01

    Places where the earth's crust has formed deep fissures and the plates have begun to move apart develop rift structures in which elongate blocks have subsided relative to the blocks on either side. The East African Rift is a world-famous example of such rifting. It is characterized by 1) topographic deep valleys in the rift zone, 2) sheer escarpments along the faulted walls of the rift zone, 3) a chain of lakes within the rift, most of the lakes highly saline due to evaporation in the hot temperatures characteristic of climates near the equator, 4) voluminous amounts of volcanic rocks that have flowed from faults along the sides of the rift, and 5) volcanic cones where magma flow was most intense. This example in Kenya displays most of these features near Lake Begoria.

    The image was acquired December 18, 2002, covers an area of 40.5 x 32 km, and is located at 0.1 degrees north latitude, 36.1 degrees east longitude.

    The U.S. science team is located at NASA's Jet Propulsion Laboratory, Pasadena, Calif. The Terra mission is part of NASA's Science Mission Directorate.

  5. Rift Valley Fever Virus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever virus (RVFV) is a mosquito-transmitted virus or arbovirus that is endemic in sub-Saharan Africa. In the last decade, Rift Valley fever (RVF) outbreaks have resulted in loss of human and animal life, as well as had significant economic impact. The disease in livestock is primarily a...

  6. Rift Valley Fever (RVF)

    MedlinePlus

    ... Outbreak resources, VHF information for specific groups, virus ecology, references... RVF Distribution Map Rift Valley Fever Transmission ... Outbreaks Outbreak Summaries RVF Distribution Map Resources Virus Ecology File Formats Help: How do I view different ...

  7. Molecular genetic analyses of historical lake sediments from the East African Rift Valley

    NASA Astrophysics Data System (ADS)

    Epp, L. S.; Stoof, K.; Trauth, M. H.; Tiedemann, R.

    2009-04-01

    Ancient DNA research, especially that of environmental samples, has to date focussed mainly on samples obtained from colder regions, owing to better DNA preservation. We explored the potential of using ancient DNA from sediments and sediment cores of shallow lakes in Kenya. These lakes, located in the eastern branch of the East African Rift Valley, are in close proximity, yet display strikingly different hydrological and geological features. Present day lakes range in alkalinity from pH 11 (Lake Elmenteita) to pH 8 (Lake Naivasha), and in depth from less than one meter to 15 meters. Historically they have undergone a number of drastic changes in lake level and environmental conditions, both on geological timescales and during the last centuries. Within this setting we employed molecular genetic methods to study DNA from recent and historic lake sediments, focussing on rotifers and diatoms. We analyzed population and species succession in the alkaline-saline crater lake Sonachi since the beginning of the 19th century, as well as distributions in recent and historic sediments of other lakes of the East African Rift System. To specifically detect diatoms, we developed a protocol using taxon-specific polymerase chain reactions and separation of products by denaturing high performance liquid chromatography (DHPLC). Employing this protocol we retrieved "ancient" DNA from a number of taxonomically diverse organisms, but found diatoms only in sediments younger than approximately 90 years. Using higly specific reactions for rotifers of the genus Brachionus, we tracked species and population succession in Lake Sonachi during the last 200 years. Populations were dominated by a single mitochondrial haplotype for a period of 150 years, and two putatively intraspecific turnovers in dominance occurred. They were both correlated to major environmental changes documented by profound visible changes in sediment composition of the core: the deposition of a volcanic ash and a

  8. Rift Valley Fever Review

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF) is a disease of animals and humans that occurs in Africa and the Arabian Peninsula. A Phlebovirus in the family Bunyaviridae causes the disease that is transmitted by mosquitoes. Epidemics occur during years of unusually heavy rainfall that assessment models are being develo...

  9. Human Dispersals Along the African Rift Valley in the Late Quaternary

    NASA Astrophysics Data System (ADS)

    Tryon, C. A.; Faith, J. T.; Peppe, D. J.

    2014-12-01

    Climate- and tectonic-driven environmental dynamics of the East African Rift System (EARS) during the Quaternary played an important role in the demographic history of early Homo sapiens, including expansions of modern humans across and out of Africa. Human forager population size, geographic range, and behaviors such as hunting strategies and residential mobility likely varied in response to changes in the local and regional environment. Throughout the Quaternary, floral and faunal change was linked at least in part to variations in moisture availability, temperature, and atmospheric CO2, which in addition to uplift and faulting, contributed to the expansion and contraction of a number of large lakes that served as biogeographic barriers to many taxa. This is particularly clear for the Lake Victoria basin, where biogeographic, geological, and paleontological evidence documents repeated expansion and contraction of the ranges of species in response to lake level and vegetation change. Across much of eastern Africa, the topography of the rift facilitated north-south dispersals, the timing of which may have depended in part on the expansion and contraction of the equatorial forest belt. Dispersal potential likely increased during the more arid periods of the late Quaternary, when the roles of lakes and forests as dispersal barriers was reduced and the extent of low net primary productivity dry grasslands increased, the latter requiring large home ranges for human foragers, conditions suitable for range expansions within H. sapiens.

  10. Rift Valley fever virus infection in African Buffalo (Syncerus caffer) herds in rural South Africa: Evidence of interepidemic transmission

    USGS Publications Warehouse

    LaBeaud, A.D.; Cross, P.C.; Getz, W.M.; Glinka, A.; King, C.H.

    2011-01-01

    Rift Valley fever virus (RVFV) is an emerging biodefense pathogen that poses significant threats to human and livestock health. To date, the interepidemic reservoirs of RVFV are not well defined. In a longitudinal survey of infectious diseases among African buffalo during 2000-2006, 550 buffalo were tested for antibodies against RVFV in 820 capture events in 302 georeferenced locations in Kruger National Park, South Africa. Overall, 115 buffalo (21%) were seropositive. Seroprevalence of RVFV was highest (32%) in the first study year, and decreased progressively in subsequent years, but had no detectable impact on survival. Nine (7%) of 126 resampled, initially seronegative animals seroconverted during periods outside any reported regional RVFV outbreaks. Seroconversions for RVFV were detected in significant temporal clusters during 2001-2003 and in 2004. These findings highlight the potential importance of wildlife as reservoirs for RVFV and interepidemic RVFV transmission in perpetuating regional RVFV transmission risk. Copyright ?? 2011 by The American Society of Tropical Medicine and Hygiene.

  11. The East African rift system

    NASA Astrophysics Data System (ADS)

    Chorowicz, Jean

    2005-10-01

    This overview paper considers the East African rift system (EARS) as an intra-continental ridge system, comprising an axial rift. It describes the structural organization in three branches, the overall morphology, lithospheric cross-sections, the morphotectonics, the main tectonic features—with emphasis on the tension fractures—and volcanism in its relationships with the tectonics. The most characteristic features in the EARS are narrow elongate zones of thinned continental lithosphere related to asthenospheric intrusions in the upper mantle. This hidden part of the rift structure is expressed on the surface by thermal uplift of the rift shoulders. The graben valleys and basins are organized over a major failure in the lithospheric mantle, and in the crust comprise a major border fault, linked in depth to a low angle detachment fault, inducing asymmetric roll-over pattern, eventually accompanied by smaller normal faulting and tilted blocks. Considering the kinematics, divergent movements caused the continent to split along lines of preexisting lithospheric weaknesses marked by ancient tectonic patterns that focus the extensional strain. The hypothesis favored here is SE-ward relative divergent drifting of a not yet well individualized Somalian plate, a model in agreement with the existence of NW-striking transform and transfer zones. The East African rift system comprises a unique succession of graben basins linked and segmented by intracontinental transform, transfer and accommodation zones. In an attempt to make a point on the rift system evolution through time and space, it is clear that the role of plume impacts is determinant. The main phenomenon is formation of domes related to plume effect, weakening the lithosphere and, long after, failure inducing focused upper mantle thinning, asthenospheric intrusion and related thermal uplift of shoulders. The plume that had formed first at around 30 Ma was not in the Afar but likely in Lake Tana region (Ethiopia

  12. The Olorgesailie Drilling Project (ODP): a high-resolution drill core record from a hominin site in the East African Rift Valley

    NASA Astrophysics Data System (ADS)

    Dommain, R.; Potts, R.; Behrensmeyer, A. K.; Deino, A. L.

    2014-12-01

    The East African rift valley contains an outstanding record of hominin fossils that document human evolution over the Plio-Pleistocene when the global and regional climate and the rift valley itself changed markedly. The sediments of fossil localities typically provide, however, only short time windows into past climatic and environmental conditions. Continuous, long-term terrestrial records are now becoming available through core drilling to help elucidate the paleoenvironmental context of human evolution. Here we present a 500,000 year long high-resolution drill core record obtained from a key fossil and archeological site - the Olorgesailie Basin in the southern Kenya Rift Valley, well known for its sequence of archeological and faunal sites for the past 1.2 million years. In 2012 two drill cores (54 and 166 m long) were collected in the Koora Plain just south of Mt. Olorgesailie as part of the Olorgesailie Drilling Project (ODP) to establish a detailed climate and ecological record associated with the last evidence of Homo erectus in Africa, the oldest transition of Acheulean to Middle Stone Age technology, and large mammal species turnover, all of which are documented in the Olorgesailie excavations. The cores were sampled at the National Lacustrine Core Facility. More than 140 samples of tephra and trachytic basement lavas have led to high-precision 40Ar/39Ar dating. The cores are being analyzed for a suite of paleoclimatic and paleoecological proxies such as diatoms, pollen, fungal spores, phytoliths, ostracodes, carbonate isotopes, leaf wax biomarkers, charcoal, and clay mineralogy. Sedimentological analyses, including lithological descriptions, microscopic smear slide analysis (242 samples), and grain-size analysis, reveal a highly variable sedimentary sequence of deep lake phases with laminated sediments, diatomites, shallow lake and near shore phases, fluvial deposits, paleosols, interspersed carbonate layers, and abundant volcanic ash deposits. Magnetic

  13. Regional assessment of lake ecological states using Landsat: A classification scheme for alkaline-saline, flamingo lakes in the East African Rift Valley

    NASA Astrophysics Data System (ADS)

    Tebbs, E. J.; Remedios, J. J.; Avery, S. T.; Rowland, C. S.; Harper, D. M.

    2015-08-01

    In situ reflectance measurements and Landsat satellite imagery were combined to develop an optical classification scheme for alkaline-saline lakes in the Eastern Rift Valley. The classification allows the ecological state and consequent value, in this case to Lesser Flamingos, to be determined using Landsat satellite imagery. Lesser Flamingos depend on a network of 15 alkaline-saline lakes in East African Rift Valley, where they feed by filtering cyanobacteria and benthic diatoms from the lakes' waters. The classification developed here was based on a decision tree which used the reflectance in Landsat ETM+ bands 2-4 to assign one of six classes: low phytoplankton biomass; suspended sediment-dominated; microphytobenthos; high cyanobacterial biomass; cyanobacterial scum and bleached cyanobacterial scum. The classification accuracy was 77% when verified against in situ measurements. Classified imagery and timeseries were produced for selected lakes, which show the different ecological behaviours of these complex systems. The results have highlighted the importance to flamingos of the food resources offered by the extremely remote Lake Logipi. This study has demonstrated the potential of high spatial resolution, low spectral resolution sensors for providing ecologically valuable information at a regional scale, for alkaline-saline lakes and similar hypereutrophic inland waters.

  14. Drinking water quality in the Ethiopian section of the East African Rift Valley I--data and health aspects.

    PubMed

    Reimann, Clemens; Bjorvatn, Kjell; Frengstad, Bjørn; Melaku, Zenebe; Tekle-Haimanot, Redda; Siewers, Ulrich

    2003-07-20

    Drinking water samples were collected throughout the Ethiopian part of the Rift Valley, separated into water drawn from deep wells (deeper than 60 m), shallow wells (<60 m deep), hot springs (T>36 degrees C), springs (T<32 degrees C) and rivers. A total of 138 samples were analysed for 70 parameters (Ag, Al, As, B, Ba, Be, Bi, Br, Ca, Cd, Ce, Cl, Co, Cr, Cs, Cu, Dy, Er, Eu, F, Fe, Ga, Gd, Ge, Hf, Hg, Ho, I, In, K, La, Li, Lu, Mg, Mn, Mo, Na, Nb, Nd, Ni, NO(2), NO(3), Pb, Pr, Rb, Sb, Se, Si, Sm, Sn, SO(4), Sr, Ta, Tb, Te, Th, Ti, Tl, Tm, U, V, W, Y, Yb, Zn, Zr, temperature, pH, conductivity and alkalinity) with ion chromatography (anions), spectrometry (ICP-OES and ICP-MS, cations) and parameter-specific (e.g. titration) techniques. In terms of European water directives and WHO guidelines, 86% of all wells yield water that fails to pass the quality standards set for drinking water. The most problematic element is fluoride (F), for which 33% of all samples returned values above 1.5 mg/l and up to 11.6 mg/l. The incidence of dental and skeletal fluorosis is well documented in the Rift Valley. Another problematic element may be uranium (U)-47% of all wells yield water with concentrations above the newly suggested WHO maximum acceptable concentration (MAC) of 2 microg/l. Fortunately, only 7% of the collected samples are above the 10 microg/l EU-MAC for As in drinking water. PMID:12826384

  15. Detection and Response for Rift Valley fever

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever is a viral disease that impacts domestic livestock and humans in Africa and the Middle East, and poses a threat to military operations in these areas. We describe a Rift Valley fever Risk Monitoring website, and its ability to predict risk of disease temporally and spatially. We al...

  16. Enemies and turncoats: bovine tuberculosis exposes pathogenic potential of Rift Valley fever virus in a common host, African buffalo (Syncerus caffer).

    PubMed

    Beechler, B R; Manore, C A; Reininghaus, B; O'Neal, D; Gorsich, E E; Ezenwa, V O; Jolles, A E

    2015-04-22

    The ubiquity and importance of parasite co-infections in populations of free-living animals is beginning to be recognized, but few studies have demonstrated differential fitness effects of single infection versus co-infection in free-living populations. We investigated interactions between the emerging bacterial disease bovine tuberculosis (BTB) and the previously existing viral disease Rift Valley fever (RVF) in a competent reservoir host, African buffalo, combining data from a natural outbreak of RVF in captive buffalo at a buffalo breeding facility in 2008 with data collected from a neighbouring free-living herd of African buffalo in Kruger National Park. RVF infection was twice as likely in individual BTB+ buffalo as in BTB- buffalo, which, according to a mathematical model, may increase RVF outbreak size at the population level. In addition, co-infection was associated with a far higher rate of fetal abortion than other infection states. Immune interactions between BTB and RVF may underlie both of these interactions, since animals with BTB had decreased innate immunity and increased pro-inflammatory immune responses. This study is one of the first to demonstrate how the consequences of emerging infections extend beyond direct effects on host health, potentially altering the dynamics and fitness effects of infectious diseases that had previously existed in the ecosystem on free-ranging wildlife populations. PMID:25788592

  17. Enemies and turncoats: bovine tuberculosis exposes pathogenic potential of Rift Valley fever virus in a common host, African buffalo (Syncerus caffer)

    PubMed Central

    Beechler, B. R.; Manore, C. A.; Reininghaus, B.; O'Neal, D.; Gorsich, E. E.; Ezenwa, V. O.; Jolles, A. E.

    2015-01-01

    The ubiquity and importance of parasite co-infections in populations of free-living animals is beginning to be recognized, but few studies have demonstrated differential fitness effects of single infection versus co-infection in free-living populations. We investigated interactions between the emerging bacterial disease bovine tuberculosis (BTB) and the previously existing viral disease Rift Valley fever (RVF) in a competent reservoir host, African buffalo, combining data from a natural outbreak of RVF in captive buffalo at a buffalo breeding facility in 2008 with data collected from a neighbouring free-living herd of African buffalo in Kruger National Park. RVF infection was twice as likely in individual BTB+ buffalo as in BTB− buffalo, which, according to a mathematical model, may increase RVF outbreak size at the population level. In addition, co-infection was associated with a far higher rate of fetal abortion than other infection states. Immune interactions between BTB and RVF may underlie both of these interactions, since animals with BTB had decreased innate immunity and increased pro-inflammatory immune responses. This study is one of the first to demonstrate how the consequences of emerging infections extend beyond direct effects on host health, potentially altering the dynamics and fitness effects of infectious diseases that had previously existed in the ecosystem on free-ranging wildlife populations. PMID:25788592

  18. Serological Evidence of Rift Valley Fever Virus Circulation in Domestic Cattle and African Buffalo in Northern Botswana (2010-2011).

    PubMed

    Jori, Ferran; Alexander, Kathleen A; Mokopasetso, Mokganedi; Munstermann, Suzanne; Moagabo, Keabetswe; Paweska, Janusz T

    2015-01-01

    Rift Valley fever (RVF) is endemic in many countries in Sub-Saharan Africa and is responsible for severe outbreaks in livestock characterized by a sudden onset of abortions and high neonatal mortality. During the last decade, several outbreaks have occurred in Southern Africa, with a very limited number of cases reported in Botswana. To date, published information on the occurrence of RVF in wild and domestic animals from Botswana is very scarce and outdated, despite being critical to national and regional disease control. To address this gap, 863 cattle and 150 buffalo sampled at the interface between livestock areas and the Chobe National Park (CNP) and the Okavango Delta (OD) were screened for the presence of RVF virus (RVFV) neutralizing antibodies. Antibodies were detected in 5.7% (n = 863), 95% confidence intervals (CI) (4.3-7.5%) of cattle and 12.7% (n = 150), 95% CI (7.8-19.5%) of buffalo samples. The overall prevalence was significantly higher (p = 0.0016) for buffalo [12.7%] than for cattle [5.7%]. Equally, when comparing RVF seroprevalence in both wildlife areas for all pooled bovid species, it was significantly higher in CNP than in OD (9.5 vs. 4%, respectively; p = 0.0004). Our data provide the first evidence of wide circulation of RVFV in both buffalo and cattle populations in Northern Botswana and highlight the need for further epidemiological and ecological investigations on RVF at the wildlife-livestock-human interface in this region. PMID:26664990

  19. Serological Evidence of Rift Valley Fever Virus Circulation in Domestic Cattle and African Buffalo in Northern Botswana (2010–2011)

    PubMed Central

    Jori, Ferran; Alexander, Kathleen A.; Mokopasetso, Mokganedi; Munstermann, Suzanne; Moagabo, Keabetswe; Paweska, Janusz T.

    2015-01-01

    Rift Valley fever (RVF) is endemic in many countries in Sub-Saharan Africa and is responsible for severe outbreaks in livestock characterized by a sudden onset of abortions and high neonatal mortality. During the last decade, several outbreaks have occurred in Southern Africa, with a very limited number of cases reported in Botswana. To date, published information on the occurrence of RVF in wild and domestic animals from Botswana is very scarce and outdated, despite being critical to national and regional disease control. To address this gap, 863 cattle and 150 buffalo sampled at the interface between livestock areas and the Chobe National Park (CNP) and the Okavango Delta (OD) were screened for the presence of RVF virus (RVFV) neutralizing antibodies. Antibodies were detected in 5.7% (n = 863), 95% confidence intervals (CI) (4.3–7.5%) of cattle and 12.7% (n = 150), 95% CI (7.8–19.5%) of buffalo samples. The overall prevalence was significantly higher (p = 0.0016) for buffalo [12.7%] than for cattle [5.7%]. Equally, when comparing RVF seroprevalence in both wildlife areas for all pooled bovid species, it was significantly higher in CNP than in OD (9.5 vs. 4%, respectively; p = 0.0004). Our data provide the first evidence of wide circulation of RVFV in both buffalo and cattle populations in Northern Botswana and highlight the need for further epidemiological and ecological investigations on RVF at the wildlife–livestock–human interface in this region. PMID:26664990

  20. Statistical Modeling of the Abundance of Vectors of West African Rift Valley Fever in Barkédji, Senegal

    PubMed Central

    Talla, Cheikh; Diallo, Diawo; Dia, Ibrahima; Ba, Yamar; Ndione, Jacques-André; Sall, Amadou Alpha; Morse, Andy; Diop, Aliou; Diallo, Mawlouth

    2014-01-01

    Rift Valley fever is an emerging mosquito-borne disease that represents a threat to human and animal health. The exophilic and exophagic behavior of the two main vector in West Africa (Aedes vexans and Culex poicilipes), adverse events post-vaccination, and lack of treatment, render ineffective the disease control. Therefore it is essential to develop an information system that facilitates decision-making and the implementation of adaptation strategies. In East Africa, RVF outbreaks are linked with abnormally high rainfall, and can be predicted up to 5 months in advance by modeling approaches using climatic and environmental parameters. However, the application of these models in West Africa remains unsatisfactory due to a lack of data for animal and human cases and differences in the dynamics of the disease emergence and the vector species involved in transmission. Models have been proposed for West Africa but they were restricted to rainfall impact analysis without a spatial dimension. In this study, we developed a mixed Bayesian statistical model to evaluate the effects of climatic and ecological determinants on the spatiotemporal dynamics of the two main vectors. Adult mosquito abundance data were generated from July to December every fortnight in 2005–2006 at 79 sites, including temporary ponds, bare soils, shrubby savannah, wooded savannah, steppes, and villages in the Barkédji area. The results demonstrate the importance of environmental factors and weather conditions for predicting mosquito abundance. The rainfall and minimum temperature were positively correlated with the abundance of Cx. poicilipes, whereas the maximum temperature had negative effects. The rainfall was negatively correlated with the abundance of Ae. vexans. After combining land cover classes, weather conditions, and vector abundance, our model was used to predict the areas and periods with the highest risks of vector pressure. This information could support decision-making to improve

  1. Kantis: A new Australopithecus site on the shoulders of the Rift Valley near Nairobi, Kenya.

    PubMed

    Mbua, Emma; Kusaka, Soichiro; Kunimatsu, Yutaka; Geraads, Denis; Sawada, Yoshihiro; Brown, Francis H; Sakai, Tetsuya; Boisserie, Jean-Renaud; Saneyoshi, Mototaka; Omuombo, Christine; Muteti, Samuel; Hirata, Takafumi; Hayashida, Akira; Iwano, Hideki; Danhara, Tohru; Bobe, René; Jicha, Brian; Nakatsukasa, Masato

    2016-05-01

    Most Plio-Pleistocene sites in the Gregory Rift Valley that have yielded abundant fossil hominins lie on the Rift Valley floor. Here we report a new Pliocene site, Kantis, on the shoulder of the Gregory Rift Valley, which extends the geographical range of Australopithecus afarensis to the highlands of Kenya. This species, known from sites in Ethiopia, Tanzania, and possibly Kenya, is believed to be adapted to a wide spectrum of habitats, from open grassland to woodland. The Kantis fauna is generally similar to that reported from other contemporaneous A. afarensis sites on the Rift Valley floor. However, its faunal composition and stable carbon isotopic data from dental enamel suggest a stronger C4 environment than that present at those sites. Although the Gregory Rift Valley has been the focus of paleontologists' attention for many years, surveys of the Rift shoulder may provide new perspective on African Pliocene mammal and hominin evolution. PMID:27178456

  2. Genetic Evidence for Rift Valley Fever Outbreaks in Madagascar Resulting from Virus Introductions from the East African Mainland rather than Enzootic Maintenance▿†‡

    PubMed Central

    Carroll, Serena A.; Reynes, Jean-Marc; Khristova, Marina L.; Andriamandimby, Soa Fy; Rollin, Pierre E.; Nichol, Stuart T.

    2011-01-01

    Rift Valley fever virus (RVFV), a mosquito-borne phlebovirus, has been detected in Madagascar since 1979, with occasional outbreaks. In 2008 to 2009, a large RVFV outbreak was detected in Malagasy livestock and humans during two successive rainy seasons. To determine whether cases were due to enzootic maintenance of the virus within Madagascar or to importation from the East African mainland, nine RVFV whole genomic sequences were generated for viruses from the 1991 and 2008 Malagasy outbreaks. Bayesian coalescent analyses of available whole S, M, and L segment sequences were used to estimate the time to the most recent common ancestor for the RVFVs. The 1979 Madagascar isolate shared a common ancestor with strains on the mainland around 1972. The 1991 Madagascar isolates were in a clade distinct from that of the 1979 isolate and shared a common ancestor around 1987. Finally, the 2008 Madagascar viruses were embedded within a large clade of RVFVs from the 2006–2007 outbreak in East Africa and shared a common ancestor around 2003 to 2004. These results suggest that the most recent Madagascar outbreak was caused by a virus likely arriving in the country some time between 2003 and 2008 and that this outbreak may be an extension of the 2006–2007 East African outbreak. Clustering of the Malagasy sequences into subclades indicates that the viruses have continued to evolve during their short-term circulation within the country. These data are consistent with the notion that RVFV outbreaks in Madagascar result not from emergence from enzootic cycles within the country but from recurrent virus introductions from the East African mainland. PMID:21507967

  3. Diagnostic approaches for Rift Valley Fever

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Disease outbreaks caused by arthropod-borne animal viruses (arboviruses) resulting in significant livestock and economic losses world-wide appear to be increasing. Rift Valley fever (RVF) virus (RVFV) is an important arbovirus that causes lethal disease in cattle, camels, sheep and goats in Sub-Saha...

  4. Prediction of a Rift Valley fever Outbreak

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Using satellite measurements to detect elevated sea surface temperatures (SSTs) and subsequent elevated normalized difference vegetation index (NDVI) data in Africa, we predicted an outbreak of Rift Valley fever (RVF) in humans and animals in the Horn of Africa during September 2006-May 2007. We det...

  5. Rift Valley fever: A neglected zoonotic disease?

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF) is a serious viral disease of animals and humans in Africa and the Middle East that is transmitted by mosquitoes. First isolated in Kenya during an outbreak in 1930, subsequent outbreaks have had a significant impact on animal and human health, as well as national economies. ...

  6. Evolutionary model of the oblique rift basins- Central African Rifts

    NASA Astrophysics Data System (ADS)

    Yang, Kenn-Ming; Cheng, I.-Wen; Wu, Jong-Chang

    2016-04-01

    The geometry of oblique-rifting basin is strongly related with the angle (α) between the trend of rift and that of regional major extensional stress. The main purpose of this study is to investigate characteristics of geometry and kinematics of structure and tectono-stratigraphy during basin evolution of Central African Rifts (CAS). In this study, we simulated the formation of oblique-rifting basin with Particle Flow Code 3-Dimensions-(PFC 3D) and compared the simulation results with the tectonic settings of a series of basin in CAS. CAS started to develop in Early Cretaceous (130Ma) and lasted until the Late Cretaceous (85Ma-80Ma). The following collision between the African and Eurasian plates imposed compressional stress on CAS and folded the strata in the rift basins. Although the characteristics of rift basin formation remain controversial, palinspastic sections constructed in this study show that, in the Early Cretaceous, the rift basins are mainly characterized by normal faults and half-grabens. In the Late Cretaceous, the morphology of the rift basins was altered by large-scaled tectonic compression with the active Borogop Fault of regional scale. Also, en echelon trend of normal faults in the basins were measured and the angles between the trend with that of the rift axes of each basin were demonstrated, indicating that the development of CAS was affected by the regional extensional stress with a dextral component during the rifting process and, therefore, the rift basins were formed by oblique-rifting. In this study, we simulated the oblique-rifting basin model of various α with Particle Flow Code 3-Dimensions-(PFC 3D). The main theory of PFC 3D is based on the Discrete Element Method (DEM), in which parameters are applied to every particle in the models. We applied forces acting on both sides of rift axis, which α are 45°, 60°, 75° and 90° respectively, to simulate basin formation under oblique-rifting process. The study results of simulation

  7. Rainfall and epizootic Rift Valley fever*

    PubMed Central

    Davies, F. G.; Linthicum, K. J.; James, A. D.

    1985-01-01

    Epizootic Rift Valley fever (RVF) has occurred in Kenya four times over the last 30 years. Widespread, frequent, and persistent rainfall has been a feature of these epizootic periods. A composite statistic, based upon measurements of these rainfall characteristics, is positive during periods of epizootic Rift Valley fever. The heavy rainfall raises the level of the water table in certain areas, flooding the grassland depressions (dambos) that are the habitat of the immature forms of certain ground-pool-breeding mosquitos of the genus Aedes. RVF virus is probably transmitted transovarially in these species, very large numbers of which emerge under these damp conditions. This is when clinical signs of the disease are first seen. PMID:3879206

  8. Classification of the rift zones of venus: Rift valleys and graben belts

    NASA Astrophysics Data System (ADS)

    Guseva, E. N.

    2016-05-01

    The spatial distribution of rift zones of Venus, their topographic configuration, morphometric parameters, and the type of volcanism associating with rifts were analyzed. This allowed the main characteristic features of rifts to be revealed and two different types of rift-forming structures, serving for classification of rift zones as rift valleys and graben belts, to be isolated. These structural types (facies) of rift zones are differently expressed in the relief: rift valleys are individual deep (several kilometers) W-shaped canyons, while graben belts are clusters of multiple V-shaped and rather shallow (hundreds of meters) depressions. Graben belts are longer and wider, as compared to rift valleys. Rift valleys are spatially associated with dome-shaped volcanic rises and large volcanos (concentrated volcanic sources), while graben belts do not exhibit such associations. Volcanic activity in the graben belts are presented by spacious lava fields with no apparent sources of volcanism. Graben belts and rift valleys were formed during the Atlian Period of geologic history of Venus, and they characterized the tectonic style of the planet at the late stages of its geologic evolution. Formation of this or that structural facies of the rift zones of Venus were probably governed by the thickness of the lithosphere, its rheological properties, and the development degree of the mantle diapirs associating with rift zones.

  9. The Offshore East African Rift System

    NASA Astrophysics Data System (ADS)

    Franke, D.; Klimke, J.; Jokat, W.; Stollhofen, H.; Mahanjane, S.

    2014-12-01

    Numerous studies have addressed various aspects of the East African Rift system but surprisingly few on the offshore continuation of the south-eastern branch of the rift into the Mozambique Channel. The most prominent article has been published almost 30 years ago by Mougenot et al. (1986) and is based on vintage seismic data. Several studies investigating earthquakes and plate motions from GPS measurements reveal recent deformation along the offshore branch of the East African Rift system. Slip vectors from earthquakes data in Mozambique's offshore basins show a consistent NE direction. Fault plane solutions reveal ~ E-W extensional failure with focal depth clustering around 19 km and 40 km, respectively. Here, we present new evidence for neotectonic deformation derived from modern seismic reflection data and supported by additional geophysical data. The modern rift system obviously reactivates structures from the disintegration of eastern Gondwana. During the Jurassic/Cretaceous opening of the Somali and Mozambique Basins, Madagascar moved southwards along a major shear zone, to its present position. Since the Miocene, parts of the shear zone became reactivated and structurally overprinted by the East African rift system. The Kerimbas Graben offshore northern Mozambique is the most prominent manifestation of recent extensional deformation. Bathymetry data shows that it deepens northwards, with approximately 700 m downthrown on the eastern shoulder. The graben can be subdivided into four subbasins by crosscutting structural lineaments with a NW-SE trend. Together with the N-S striking graben-bounding faults, this resembles a conjugate fault system. In seismic reflection data normal faulting is distinct not only at the earthquake epicenters. The faults cut through the sedimentary successions and typically reach the seafloor, indicating ongoing recent deformation. Reference: Mougenot, D., Recq, M., Virlogeux, P., and Lepvrier, C., 1986, Seaward extension of the East

  10. Anomalous deep earthquakes beneath the East African Rift: evidence for rift induced delamination of the lithosphere?

    NASA Astrophysics Data System (ADS)

    Lindenfeld, Michael; Rümpker, Georg; Schmeling, Harro; Wallner, Herbert

    2010-05-01

    The over 5000 m high Rwenzori Mountains are situated within the western branch of the East African Rift System, at the border between Uganda and the Democratic Republic of Congo. They represent a basement block within the rift valley whose origin and relation to the evolution of the EARS are highly puzzling. During 2006/2007 a network of 27 seismological stations was operated in this area to investigate crustal and upper mantle structure in conjunction with local seismicity. The data analysis revealed unexpectedly high microseismic activity. On average more than 800 events per month could be located with magnitudes ranging from 0.5 to 5.1. Hypocentral depths go as deep as 30 km with a pronounced concentration of activity at a depth of about 15 km. This presentation focuses on a cluster of seven earthquakes that were located at anomalous depths between 53 and 60 km. According to our present knowledge these are the deepest events so far observed within the EARS and the African Plate. Their origin might be connected to magmatic intrusions. However, the existence of earthquakes at this depth is enigmatic, especially within a rifting regime were one expects hot and weak material close to the surface, which is not capable of seismogenic deformation. We think that these events are closely related to the evolution of the Rwenzoris. A recent hypothesis to explain the extreme uplift of the Rwenzori Mountains is rift induced delamination (RID) of mantle lithosphere that is captured between two approaching rift segments. By numerical modelling we show that the RID-process is also able to bring material that is cold and brittle enough to release seismic energy into greater depth. Therefore the RID-mechanism gives a consistent explanation for the detected deep events as well as for the uplift of a mountain block in a rift setting.

  11. SATELLITE-BASED RIFT VALLEY FEVER FORECASTS PREDICT A LARGE YELLOW FEVER EPIDEMIC IN SUDAN, 2005

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Sustained, heavy East African rainfall is associated with Aedes spp. breeding in Kenyan grasslands and Rift Valley Fever (RVF) epidemics. Validated RVF forecasts use satellite measurements of vegetation greenness (which increases after heavy rains) and other eco-climate indicators. These models may ...

  12. Sociocultural and Economic Dimensions of Rift Valley Fever

    PubMed Central

    Muga, Geoffrey Otieno; Onyango-Ouma, Washington; Sang, Rosemary; Affognon, Hippolyte

    2015-01-01

    Health researchers have advocated for a cross-disciplinary approach to the study and prevention of infectious zoonotic diseases, such as Rift Valley Fever. It is believed that this approach can help bring out the social determinants and effects of the zoonotic diseases for the design of appropriate interventions and public health policy. A comprehensive literature review using a systematic search strategy was undertaken to explore the sociocultural and economic factors that influence the transmission and spread of Rift Valley Fever. Although the findings reveal a paucity of social research on Rift Valley Fever, they suggest that livestock sacrificial rituals, food preparation and consumption practices, gender roles, and inadequate resource base for public institutions are the key factors that influence the transmission. It is concluded that there is need for cross-disciplinary studies to increase the understanding of Rift Valley Fever and facilitate appropriate and timely response and mitigation measures. PMID:25688166

  13. The First Prediction of a Rift Valley Fever Outbreak

    NASA Technical Reports Server (NTRS)

    Anyamba, Assaf; Chretien, Jean-Paul; Small, Jennifer; Tucker, Compton J.; Formenty, Pierre; Richardson, Jason H.; Britch, Seth C.; Schnabel, David C.; Erickson, Ralph L.; Linthicum, Kenneth J.

    2009-01-01

    El Nino/Southern Oscillation (ENSO) related anomalies were analyzed using a combination of satellite measurements of elevated sea surface temperatures, and subsequent elevated rainfall and satellite derived normalized difference vegetation index data. A Rift Valley fever risk mapping model using these climate data predicted areas where outbreaks of Rift Valley fever in humans and animals were expected and occurred in the Horn of Africa from December 2006 to May 2007. The predictions were subsequently confirmed by entomological and epidemiological field investigations of virus activity in the areas identified as at risk. Accurate spatial and temporal predictions of disease activity, as it occurred first in southern Somalia and then through much of Kenya before affecting northern Tanzania, provided a 2 to 6 week period of warning for the Horn of Africa that facilitated disease outbreak response and mitigation activities. This is the first prospective prediction of a Rift Valley fever outbreak.

  14. 77 FR 68783 - Prospective Grant of Exclusive License: Veterinary Vaccines for Rift Valley Fever Virus

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-11-16

    ...: Veterinary Vaccines for Rift Valley Fever Virus AGENCY: Centers for Disease Control and Prevention (CDC... Rift Valley Fever Virus Utilizing Reverse Genetics,'' US Provisional Application 61/ ] 042,987, filed 4/7/2008, entitled ``Recombinant Rift Valley Fever (RVF) Viruses and Method of Use,'' PCT...

  15. Efficacy of a recombinant Rift Valley fever virus MP-12 with NSm deletion as a vaccine candidate in sheep

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever virus (RVFV), a mosquito-borne virus in the Bunyaviridae family and Phlebovirus genus, causes RVF, a disease of ruminants and man, endemic in Sub-Saharan African countries. However, outbreaks in Yemen and Saudi Arabia demonstrate the ability for RVFV to spread into virgin territory...

  16. Persistence of Rift Valley fever virus in East Africa

    NASA Astrophysics Data System (ADS)

    Gachohi, J.; Hansen, F.; Bett, B.; Kitala, P.

    2012-04-01

    Rift Valley fever virus (RVFv) is a mosquito-borne pathogen of livestock, wildlife and humans that causes severe outbreaks in intervals of several years. One of the open questions is how the virus persists between outbreaks. We developed a spatially-explicit, individual-based simulation model of the RVFv transmission dynamics to investigate this question. The model, is based on livestock and mosquito population dynamics. Spatial aspects are explicitly represented by a set of grid cells that represent mosquito breeding sites. A grid cell measures 500 by 500m and the model considers a grid of 100 by 100 grid cells; the model thus operates on the regional scale of 2500km2. Livestock herds move between grid cells, and provide connectivity between the cells. The model is used to explore the spatio-temporal dynamics of RVFv persistence in absence of a wildlife reservoir in an east African semi-arid context. Specifically, the model assesses the importance of local virus persistence in mosquito breeding sites relative to global virus persistence mitigated by movement of hosts. Local persistence is determined by the length of time the virus remains in a mosquito breeding site once introduced. In the model, this is a function of the number of mosquitoes that emerge infected and their lifespan. Global persistence is determined by the level of connectivity between isolated grid cells. Our work gives insights into the ecological and epidemiological conditions under which RVFv persists. The implication for disease surveillance and management are discussed.

  17. Complete Genome Sequence of Rift Valley Fever Virus Strain Lunyo

    PubMed Central

    Horton, Daniel L.; Marston, Denise A.; Johnson, Nicholas; Ellis, Richard J.; Fooks, Anthony R.; Hewson, Roger

    2016-01-01

    Using next-generation sequencing technologies, the first complete genome sequence of Rift Valley fever virus strain Lunyo is reported here. Originally reported as an attenuated antigenic variant strain from Uganda, genomic sequence analysis shows that Lunyo clusters together with other Ugandan isolates. PMID:27081121

  18. Forecast and Outbreak of Rift valley fever in Sudan, 2007

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Background Rift Valley fever (RVF) outbreaks occur during heavy rainfall in various sub-Saharan countries including Kenya, Somalia, and Tanzania and more recently in Saudi Arabia and Yemen. Given the wide geographic and ecological range of RVF virus, it is necessary to monitor large areas for condit...

  19. Rift Valley fever Entomology, Ecology, and Outbreak Risk Factors

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF) is a mosquito-borne zoonotic disease of domestic ruminants and humans in Africa. The disease is most severe in cattle, sheep, and goats, and it causes high mortality in young animals and abortion in adults. Exotic aanimal breeds from areas where RVF is not endemic tend to be ...

  20. Rift Valley Fever Overview and Recent Developments at USDA

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF) is a mosquito-borne viral disease with significant health and economic impacts to domestic animals and humans in much of sub-Saharan Africa. Human infections are believed to occur mainly from mosquito bites and from infectious aerosols. The available strategies for protection...

  1. Predicting the Next Outbreak of Rift Valley Fever (RVF)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF) is a mosquito-borne zoonotic disease of domestic ruminants in Africa. The disease is most severe in cattle, sheep, and goats, and it causes high mortality in young animals and abortion in adults. Exotic aanimal breeds from areas where RVF is not endemic tend to be more suscep...

  2. Potential for Rift Valley to be Introduced into North America

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF) is a mosquito-borne zoonotic disease of domestic ruminants in Africa. The disease is most severe in cattle, sheep, and goats, causing mortality in young animals and abortion in adults. Human infection causes significant morbidity and mortality. RVF occurs in sub-Saharan Afri...

  3. Development of a sheep challenge model for Rift Valley fever

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever is a zoonotic disease responsible for severe outbreaks in ruminant livestock characterized by mass abortion and high mortality rates in younger animals. The lack of a fully licensed vaccine in the US has spurred increased demand for a protective vaccine. Thus, development of a reli...

  4. Development of a sheep challenge model for Rift Valley fever

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF) is a zoonotic disease that causes severe epizootic disease in ruminants, characterized by mass abortion and high mortality rates in younger animals. The development of a reliable challenge model is an important prerequisite for evaluation of existing and novel vaccines. A stu...

  5. Comparing Two Profiles: The Amazing Size of the Rift Valleys.

    ERIC Educational Resources Information Center

    Housepian, Jean

    1983-01-01

    Describes an activity for grade 7-9 students previously introduced to topographic maps and profile lines. Two profiles of equal scale are used to help students appreciate the tremendous size of mid-ocean rift valleys. Procedures and examples of completed profiles are provided. (JN)

  6. Potential Effects of Rift Valley Fever in the United States

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever virus (RVFV) has been the cause of disease outbreaks throughout Africa and the Arabian Peninsula, and the infection often results in heavy economic costs through loss of livestock. If RVFV, which is common to select agent lists of the US Department of Health and Human Services and ...

  7. Rift Valley Fever and a New Paradigm of Research and Development for Zoonotic Disease Control

    PubMed Central

    McIntyre, Sabrina; Hogarth, Sue; Heymann, David

    2013-01-01

    Although Rift Valley fever is a disease that, through its wider societal effects, disproportionately affects vulnerable communities with poor resilience to economic and environmental challenge, Rift Valley fever virus has since its discovery in 1931 been neglected by major global donors and disease control programs. We describe recent outbreaks affecting humans and animals and discuss the serious socioeconomic effects on the communities affected and the slow pace of development of new vaccines. We also discuss the mixed global response, which has largely been fueled by the classification of the virus as a potential bioterrorism agent and its potential to migrate beyond its traditional eastern African boundaries. We argue for a refocus of strategy with increased global collaboration and a greater sense of urgency and investment that focuses on an equity-based approach in which funding and research are prioritized by need, inspired by principles of equity and social justice. PMID:23347653

  8. A recombinant Rift Valley fever virus glycoprotein subunit vaccine confers full protection against Rift Valley fever challenge in sheep

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever virus (RVFV) is a mosquito-borne zoonotic pathogen causing disease outbreaks in Africa and the Arabian Peninsula. The virus has great potential for transboundary spread due to the presence of competent vectors in non-endemic areas. There is currently no fully licensed vaccine suita...

  9. The Lake Albert Rift (uganda, East African Rift System): Deformation, Basin and Relief Evolution Since 17 Ma

    NASA Astrophysics Data System (ADS)

    Brendan, Simon; François, Guillocheau; Cécile, Robin; Olivier, Dauteuil; Thierry, Nalpas; Martin, Pickford; Brigitte, Senut; Philippe, Lays; Philippe, Bourges; Martine, Bez

    2016-04-01

    This study is based on a coupled basin infilling study and a landforms analysis of the Lake Albert Rift located at the northern part of the western branch of the East African Rift. The basin infilling study is based on both subsurface data and outcrops analysis. The objective was to (1) obtain an age model based on onshore mammals biozones, (2) to reconstruct the 3D architecture of the rift using sequence stratigraphy correlations and seismic data interpretation, (3) to characterize the deformation and its changes through times and (4) to quantify the accommodation for several time intervals. The infilling essentially consists of isopach fault-bounded units composed of lacustrine deposits wherein were characterized two major unconformities dated at 6.2 Ma (Uppermost Miocene) and 2.7 Ma (Pliocene-Pleistocene boundary), coeval with major subsidence and climatic changes. The landforms analysis is based on the characterization and relative dating (geometrical relationships with volcanism) of Ugandan landforms which consist of stepped planation surfaces (etchplains and peplians) and incised valleys. We here proposed a seven-steps reconstruction of the deformation-erosion-sedimentation relationships of the Lake Albert Basin and its catchments: - 55-45 Ma: formation of laterites corresponding to the African Surface during the very humid period of the Lower-Middle Eocene; - 45-22: stripping of the African Surface in response of the beginning of the East-African Dome uplift and formation of a pediplain which associated base level is the Atlantic Ocean; - 17-2.5 Ma: Initiation of the Lake Albert Basin around 17 Ma and creation of local base levels (Lake Albert, Edward and George) on which three pediplains tend to adapt; - 18 - 16 Ma to 6.2 Ma: "Flexural" stage (subsidence rate: 150-200 m/Ma; sedimentation rate 1.3 km3/Ma between 17 and 12 Ma and 0.6 km3/Ma from 12 to 6 Ma) - depocenters location (southern part of Lake Albert Basin) poorly controlled by fault; - 6.2 Ma to 2

  10. Land - Ocean Climate Linkages and the Human Evolution - New ICDP and IODP Drilling Initiatives in the East African Rift Valley and SW Indian Ocean

    NASA Astrophysics Data System (ADS)

    Zahn, R.; Feibel, C.; Co-Pis, Icdp/Iodp

    2009-04-01

    The past 5 Ma were marked by systematic shifts towards colder climates and concomitant reorganizations in ocean circulation and marine heat transports. Some of the changes involved plate-tectonic shifts such as the closure of the Panamanian Isthmus and restructuring of the Indonesian archipelago that affected inter-ocean communications and altered the world ocean circulation. These changes induced ocean-atmosphere feedbacks with consequences for climates globally and locally. Two new ICDP and IODP drilling initiatives target these developments from the perspectives of marine and terrestrial palaeoclimatology and the human evolution. The ICDP drilling initiative HSPDP ("Hominid Sites and Paleolakes Drilling Project"; ICDP ref. no. 10/07) targets lacustrine depocentres in Ethiopia (Hadar) and Kenya (West Turkana, Olorgesailie, Magadi) to retrieve sedimentary sequences close to the places and times where various species of hominins lived over currently available outcrop records. The records will provide a spatially resolved record of the East African environmental history in conjunction with climate variability at orbital (Milankovitch) and sub-orbital (ENSO decadal) time scales. HSPDP specifically aims at (1) compiling master chronologies for outcrops around each of the depocentres; (2) assessing which aspects of the paleoenvironmental records are a function of local origin (hydrology, hydrogeology) and which are linked with regional or larger-scale signals; (3) correlating broad-scale patterns of hominin phylogeny with the global beat of climate variability and (4) correlating regional shifts in the hominin fossil and archaeological record with more local patterns of paleoenvironmental change. Ultimately the aim is to test hypotheses that link physical and cultural adaptations in the course of the hominin evolution to local environmental change and variability. The IODP initiative SAFARI ("Southern African Climates, Agulhas Warm Water Transports and Retroflection

  11. The role of inherited crustal structures and magmatism in the development of rift segments: Insights from the Kivu basin, western branch of the East African Rift

    NASA Astrophysics Data System (ADS)

    Smets, Benoît; Delvaux, Damien; Ross, Kelly Ann; Poppe, Sam; Kervyn, Matthieu; d'Oreye, Nicolas; Kervyn, François

    2016-06-01

    The study of rift basin's morphology can provide good insights into geological features influencing the development of rift valleys and the distribution of volcanism. The Kivu rift segment represents the central section of the western branch of the East African Rift and displays morphological characteristics contrasting with other rift segments. Differences and contradictions between several structural maps of the Kivu rift make it difficult to interpret the local geodynamic setting. In the present work, we use topographic and bathymetric data to map active fault networks and study the geomorphology of the Kivu basin. This relief-based fault lineament mapping appears as a good complement for field mapping or mapping using seismic reflection profiles. Results suggest that rifting reactivated NE-SW oriented structures probably related to the Precambrian basement, creating transfer zones and influencing the location and distribution of volcanism. Both volcanic provinces, north and south of the Kivu basin, extend into Lake Kivu and are connected to each other with a series of eruptive vents along the western rift escarpment. The complex morphology of this rift basin, characterized by a double synthetic half-graben structure, might result from the combined action of normal faulting, magmatic underplating, volcanism and erosion processes.

  12. Interepidemic Rift Valley Fever Virus Seropositivity, Northeastern Kenya

    PubMed Central

    Muchiri, Eric M.; Ndzovu, Malik; Mwanje, Mariam T.; Muiruri, Samuel; Peters, Clarence J.; King, Charles H.

    2008-01-01

    Most outbreaks of Rift Valley fever (RVF) occur in remote locations after floods. To determine environmental risk factors and long-term sequelae of human RVF, we examined rates of previous Rift Valley fever virus (RVFV) exposure by age and location during an interepidemic period in 2006. In a randomized household cluster survey in 2 areas of Ijara District, Kenya, we examined 248 residents of 2 sublocations, Gumarey (village) and Sogan-Godud (town). Overall, the RVFV seropositivity rate was 13% according to immunoglobulin G ELISA; evidence of interepidemic RVFV transmission was detected. Increased seropositivity was found among older persons, those who were male, those who lived in the rural village (Gumarey), and those who had disposed of animal abortus. Rural Gumarey reported more mosquito and animal exposure than Sogan-Godud. Seropositive persons were more likely to have visual impairment and retinal lesions; other physical findings did not differ. PMID:18680647

  13. Potential for Autoimmune Pathogenesis of Rift Valley Fever Virus Retinitis

    PubMed Central

    Newman-Gerhardt, Shoshana; Muiruri, Samuel; Muchiri, Eric; Peters, Clarence J.; Morrill, John; Lucas, Alexander H.; King, Charles H.; Kazura, James; LaBeaud, Angelle Desiree

    2013-01-01

    Rift Valley Fever (RVF) is a significant threat to human health because it can progress to retinitis, encephalitis, and hemorrhagic fever. The timing of onset of Rift Valley Fever virus (RVFV) retinitis suggests an autoimmune origin. To determine whether RVFV retinitis is associated with increased levels of IgG against retinal tissue, we measured and compared levels of IgG against healthy human eye tissue by immunohistochemical analysis. We found that serum samples from RVFV-exposed Kenyans with retinitis (n = 8) were slightly more likely to have antibodies against retinal tissue than control populations, but the correlation was not statistically significant. Further investigation into the possible immune pathogenesis of RVFV retinitis could lead to improved therapies to prevent or treat this severe complication. PMID:23918215

  14. Geochemistry of East African Rift basalts: An overview

    NASA Astrophysics Data System (ADS)

    Furman, Tanya

    2007-06-01

    Mafic lavas erupted along the East African Rift System from the Afar triangle in northern Ethiopia to the Rungwe province in southern Tanzania display a wide range of geochemical and isotopic compositions that reflect heterogeneity in both source and process. In areas with the lowest degree of crustal extension (the Western and Southern Kenya Rifts) primitive lavas record the greatest extent of lithospheric melting, manifest in elevated abundances of incompatible elements and highly radiogenic Sr-Nd-Pb isotopic compositions. Where prolonged extension has removed most or all of the mantle lithosphere (the Turkana and Northern Kenya Rifts), a larger role for sub-lithospheric processes is indicated. At intermediate degrees of extension (the Main Ethiopian Rift) both lithospheric and sub-lithospheric contributions are observed, and crustal assimilation occurs in some cases. Despite the wide compositional range of African Rift basalts, a restricted number of source domains contribute to magmatism throughout the area. These individual domains are: (1) the subcontinental mantle lithosphere; (2) a plume source with high-μ Sr-Nd-Pb-He isotopic affinities, present in all areas within and south of the Turkana Depression; and (3) a plume source with isotopic signatures analogous to those observed in some ocean islands, including high 3He/ 4He values, present throughout the Ethiopian Rift and the Afar region. The two plume sources may both be derived from the South African Superplume, which is likely to be a compositionally heterogeneous feature of the lower mantle.

  15. Martian canyons and African rifts: Structural comparisons and implications

    NASA Technical Reports Server (NTRS)

    Frey, H. V.

    1978-01-01

    The resistant parts of the canyon walls of the Martian rift complex Valled Marineris were used to infer an earlier, less eroded reconstruction of the major roughs. The individual canyons were then compared with individual rifts of East Africa. When measured in units of planetary radius, Martian canyons show a distribution of lengths nearly identical to those in Africa, both for individual rifts and for compound rift systems. A common mechanism which scales with planetary radius is suggested. Martian canyons are significantly wider than African rifts. The overall pattern of the rift systems of Africa and Mars are quite different in that the African systems are composed of numerous small faults with highly variable trend. On Mars the trends are less variable; individual scarps are straighter for longer than on earth. This is probably due to the difference in tectonic histories of the two planets: the complex history of the earth and the resulting complicated basement structures influence the development of new rifts. The basement and lithosphere of Mars are inferred to be simple, reflecting a relatively inactive tectonic history prior to the formation of the canyonlands.

  16. The offshore East African Rift System: Structural framework at the toe of a juvenile rift

    NASA Astrophysics Data System (ADS)

    Franke, Dieter; Jokat, Wilfried; Ladage, Stefan; Stollhofen, Harald; Klimke, Jennifer; Lutz, Ruediger; Mahanjane, Estevão. Stefane; Ehrhardt, Axel; Schreckenberger, Bernd

    2015-10-01

    The Cenozoic East African Rift System (EARS) extends from the Red Sea to Mozambique. Here we use seismic reflection and bathymetric data to investigate the tectonic evolution of the offshore branch of the EARS. The data indicate multiple and time transgressive neotectonic deformations along ~800 km of the continental margin of northern Mozambique. We observe a transition from a mature rift basin in the north to a juvenile fault zone in the south. The respective timing of deformation is derived from detailed seismic stratigraphy. In the north, a ~30 km wide and more than 150 km long, N-S striking symmetric graben initiated as half-graben in the late Miocene. Extension accelerated in the Pliocene, causing a continuous conjugate border fault and symmetric rift graben. Coevally, the rift started to propagate southward, which resulted in a present-day ~30 km wide half-graben, approximately 200 km farther south. Since the Pleistocene, the rift has continued to propagate another ~300 km, where the incipient rift is reflected by subrecent small-scale normal faulting. Estimates of the overall brittle extension of the matured rift range between 5 and 12 km, with an along-strike southward decrease of the extension rate. The offshore portion of the EARS evolves magma poor, similar to the onshore western branch. The structural evolution of the offshore EARS is suggested to be related to and controlled by differing inherited lithospheric fabrics. Preexisting fabrics may not only guide and focus extension but also control rift architecture.

  17. Strain distribution in the East African Rift from GPS measurements

    NASA Astrophysics Data System (ADS)

    Stamps, S. D.; Saria, E.; Calais, E.; Delvaux, D.; Ebinger, C.; Combrinck, L.

    2008-12-01

    Rifting of continental lithosphere is a fundamental process that controls the growth and evolution of continents and the birth of ocean basins. Most rifting models assume that stretching results from far-field lithospheric stresses from plate motions, but there is evidence that asthenospheric processes play an active role in rifting, possibly through viscous coupling and/or the added buoyancy and thermal weakening from melt intrusions. The distribution of strain during rifting is a key observable to constrain such models but is however poorly known. The East African Rift (EAR) offers a unique opportunity to quantify strain distribution along and across an active continental rift and to compare a volcanic (Eastern branch) and a non-volcanic (Western branch) segment. In 2006, we established and first surveyed a network of 35 points across Tanzania and installed one continuous station in Dar Es Salaam (TANZ), followed in 2008 by a second occupation campaign. We present a preliminary velocity field for the central part of the EAR, spanning both the Western and Eastern rift branches. We compare our results with a recent kinematic model of the EAR (Stamps et al., GRL, 2008) and discuss its significance for understanding rifting processes.

  18. Innovative tephra studies in the East African Rift System

    NASA Astrophysics Data System (ADS)

    WoldeGabriel, Giday; Hart, William K.; Heiken, Grant

    Geosciences investigations form the foundation for paleoanthropological research in the East African Rift System. However, innovative applications of tephra studies for constraining spatial and temporal relations of diverse geological processes, biostratigraphic records, and paleoenvironmental conditions within the East African Rift System were fueled by paleoanthropological investigations into the origin and evolution of hominids and material culture. Tephra is a collective, size-independent term used for any material ejected during an explosive volcanic eruption.The East African Rift System has become a magnet for paleoanthropological research ever since the discovery of the first hominids at Olduvai Gorge, in Tanzania, in the 1950s [Leakey et al., 1961]. Currently, numerous multidisciplinary scientific teams from academic institutions in the United States and Western Europe make annual pilgrimages for a couple of months to conduct paleoanthropological field research in the fossil-rich sedimentary deposits of the East African Rift System in Ethiopia, Kenya, and Tanzania. The field expedition consists of geological, paleontological, archaeological, and paleoenvironmental investigations.

  19. Rift valley fever in the US: Commerce networks, climate, and susceptible vector and host populations

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF) is a mosquito-borne hemorrhagic viral disease with substantial negative impacts on public and animal health in its endemic range of sub-Saharan Africa. Rift Valley fever virus (RVFV) could enter the United States and lead to widespread morbidity and mortality in humans, domes...

  20. A network-based meta-population approach to model Rift Valley fever epidemics

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever virus (RVFV) has been expanding its geographical distribution with important implications for both human and animal health. The emergence of Rift Valley fever (RVF) in the Middle East, and its continuing presence in many areas of Africa, has negatively impacted both medical and vet...

  1. Indirect detection of subsurface outflow from a rift valley lake

    NASA Astrophysics Data System (ADS)

    Darling, W. G.; Allen, D. J.; Armannsson, H.

    1990-02-01

    Naivasha, highest of the Kenya (Gregory) Rift Valley lakes, has no surface outlet. However, unlike other Rift lakes it has not become saline despite high potential evaporation rates, which indicates that there must be some subsurface drainage. The fate of this outflow has been the subject of speculation for many years, especially during the general decline in lake water level during the 1980's. Particularly to the south of the lake, there are few opportunities to obtain information from direct groundwater sampling. However, the stable isotopic composition of fumarole steam from late Quaternary volcanic centres in the area has been used to infer groundwater composition. Using a simple mixing model between Rift-flank groundwater and highly-evaporated lakewater, this has enabled subsurface water flow to be contoured by its lakewater content. By this method, outflow can still be detected some 30 km to the south of the lake. Stable isotope data also confirm that much of the steam used by the local Olkaria geothermal power station is derived from lakewater, though simple balance considerations show that steam use cannot alone be responsible for the fall in lake level observed during the 1980's.

  2. Mantle support of the East African Rift System

    NASA Astrophysics Data System (ADS)

    Lin, S.; van Keken, P. E.; Brandenburg, J. P.; Furman, T.; Bryce, J.

    2007-12-01

    The African Superplume is a region of slow seismic wave velocities in the lower mantle under southern Africa. The uplift, volcanism and rifting that defines the much of eastern and southern Africa suggest a dynamic link between lower mantle dynamics and near-surface processes affecting the African plate. The dynamic link between the lower mantle and the surface, and the structure and dynamics of the upper mantle below the East African Rift System (EARS) remain unclear. As part of a comprehensive geochemical and numerical investigation of basaltic magmatism in the EARS we have modeled the interaction between putative upper mantle plumes and the rifting continental lithosphere. The modeling provides dynamically tested scenarios that explain the observed episodes of Cenozoic volcanism. Results from recent models that provided an explanation for the present day distribution of volcanism (Lin et al., EPSL, 237, 2005) suggest two plumes below Afar and Tanzania whose uplift is influenced by lithospheric topography. In new 3D modeling we provide improved quantification of the mantle involvement in generating EARS volcanism as constrained by the timing of uplift and regional volcanism. The time scales of episodicity of the volcanism observed at Turkana (related to the Tanzania-Kenya plume) since 45 Ma can be explained by deep- seated time-dependent plume activity. We suggest that this time-dependence is due to thermochemical interactions of dense recycled oceanic crust in the thermally hot regions in the African superplume region (Lin and Van Keken, Nature, 436, 2005).

  3. Single-cycle replicable Rift Valley fever virus mutants as safe vaccine candidates.

    PubMed

    Terasaki, Kaori; Tercero, Breanna R; Makino, Shinji

    2016-05-01

    Rift Valley fever virus (RVFV) is an arbovirus circulating between ruminants and mosquitoes to maintain its enzootic cycle. Humans are infected with RVFV through mosquito bites or direct contact with materials of infected animals. The virus causes Rift Valley fever (RVF), which was first recognized in the Great Rift Valley of Kenya in 1931. RVF is characterized by a febrile illness resulting in a high rate of abortions in ruminants and an acute febrile illness, followed by fatal hemorrhagic fever and encephalitis in humans. Initially, the virus was restricted to the eastern region of Africa, but the disease has now spread to southern and western Africa, as well as outside of the African continent, e.g., Madagascar, Saudi Arabia and Yemen. There is a serious concern that the virus may spread to other areas, such as North America and Europe. As vaccination is an effective tool to control RVFV epidemics, formalin-inactivated vaccines and live-attenuated RVFV vaccines have been used in endemic areas. The formalin-inactivated vaccines require boosters for effective protection, whereas the live-attenuated vaccines enable the induction of protective immunity by a single vaccination. However, the use of live-attenuated RVFV vaccines for large human populations having a varied health status is of concern, because of these vaccines' residual neuro-invasiveness and neurovirulence. Recently, novel vaccine candidates have been developed using replication-defective RVFV that can undergo only a single round of replication in infected cells. The single-cycle replicable RVFV does not cause systemic infection in immunized hosts, but enables the conferring of protective immunity. This review summarizes the properties of various RVFV vaccines and recent progress on the development of the single-cycle replicable RVFV vaccines. PMID:26022573

  4. Sensitivity of the East African rift lakes to climate variability

    NASA Astrophysics Data System (ADS)

    Olaka, L.; Trauth, M. H.

    2009-04-01

    Lakes in the East African Rift have provided excellent proxies to reconstruct past climate changes in the low latitudes. The lakes occupy volcano-tectonic depressions with highly variable climate and hydrological setting, that present a good opportunity to study the climatic and hydrogeological influences on the lake water budget. Previous studies have used lake floor sediments to establish the sensitivity of the East African rift lakes. This study focuses on geomorphology and climate to offer additional or alternative record of lake history that are key to quantifying sensitivity of these lakes as archives to external and internal climatic forcings. By using the published Holocene lake areas and levels, we analyze twelve lakes on the eastern arm of the East African rift; Ziway, Awassa, Turkana, Suguta, Baringo, Nakuru, Elmenteita, Naivasha, Natron, Manyara and compare with Lake Victoria, that occupies the plateau between the east and the western arms of the rift. Using the SRTM data, Hypsometric (area-altitude) analysis has been used to compare the lake basins between latitude 80 North and 30 South. The mean elevation for the lakes, is between 524 and 2262 meters above sea level, the lakes' hypsometric integrals (HI), a measure of landmass volume above the reference plane, vary from 0.31 to 0.76. The aridity index (Ai), defined as Precipitation/ Evapotranspiration, quantifies the water available to a lake, it encompasses land cover and climatic effects. It is lowest (arid) in the basin between the Ethiopian rift and the Kenyan rift and at the southern termination of the Kenyan Rift in the catchments of lake Turkana, Suguta, Baringo and Manyara with values of 0.55, 0.43, 0.43 and 0.5 respectively. And it is highest (wet) in the catchments of, Ziway, Awassa, Nakuru and Naivasha as 1.33,1.03 and 1.2 respectively, which occupy the highest points of the rift. Lake Victoria has an index of 1.42 the highest of these lakes and receives a high precipitation. We use a

  5. At the tip of a propagating rift - The offshore East African Rift

    NASA Astrophysics Data System (ADS)

    Franke, Dieter; Jokat, Wilfried; Ladage, Stefan; Stollhofen, Harald; Klimke, Jennifer; Lutz, Ruediger; Mahanjane, Stefane; Ehrhardt, Axel; Schreckenberger, Bernd

    2016-04-01

    Numerous studies have addressed various aspects of the East African Rift system (EARS) but surprisingly few the offshore continuation of the south-eastern branch of the rift into the Mozambique Channel. Here, we present new evidence for neotectonic deformation derived from modern seismic reflection data and supported by additional geophysical data. The Kerimbas Graben offshore northern Mozambique is the most prominent manifestation of sub-recent extensional deformation. The seismic reflection data reveals that recent normal faulting often utilizes preexisting, deeply buried half-graben structures which likely are related to the formation of the Somali Basin. The ~30 km wide and ~150 km long symmetric graben is in a stage where the linkage of scattered normal faults already did happen, resulting in increased displacement and accommodation of most of the extension across the basin. However, deep earthquakes below the rift indicate a strong and still preserved lithospheric mantle. Extension is becoming diffuse where an onshore suture, subdividing the northern from the southern metamorphic basement onshore Mozambique, is closest to the offshore rift. It appears likely that this suture is the origin for the variation in rifting style, indicating that mantle fabric resulting from a Cambrian collision has been preserved as mechanical anisotropy of the lithospheric mantle. Further south the rift focuses in an about 30 km wide half-graben. An important finding is that the entire offshore branch of the EARS lacks significant volcanism. Along the offshore EARS there are only negligible indications for recent volcanism in the reflection seismic data such as sills and dikes. Apparently the "Comoros mantle plume" (French and Romanowicz, 2015) has a very minor influence on the progressive extensional deformation along the northern Mozambique continental margin, leading eventually to breakup sometimes in the future. Combining structural with earthquake data reveals that the magma

  6. The Risk of Nosocomial Transmission of Rift Valley Fever

    PubMed Central

    Al-Hamdan, Nasser A.; Panackal, Anil A.; Al Bassam, Tami H.; Alrabea, Abdullah; Al Hazmi, Mohammed; Al Mazroa, Yagoub; Al Jefri, Mohammed; Khan, Ali S.; Ksiazek, Thomas G.

    2015-01-01

    In 2000, we investigated the Rift Valley fever (RVF) outbreak on the Arabian Peninsula—the first outside Africa—and the risk of nosocomial transmission. In a cross-sectional design, during the peak of the epidemic at its epicenter, we found four (0.6%) of 703 healthcare workers (HCWs) IgM seropositive but all with only community-associated exposures. Standard precautions are sufficient for HCWs exposed to known RVF patients, in contrast to other viral hemorrhagic fevers (VHF) such as Ebola virus disease (EVD) in which the route of transmission differs. Suspected VHF in which the etiology is uncertain should be initially managed with the most cautious infection control measures. PMID:26694834

  7. Rift Valley Fever Outbreaks in Mauritania and Related Environmental Conditions

    PubMed Central

    Caminade, Cyril; Ndione, Jacques A.; Diallo, Mawlouth; MacLeod, Dave A.; Faye, Ousmane; Ba, Yamar; Dia, Ibrahima; Morse, Andrew P.

    2014-01-01

    Four large outbreaks of Rift Valley Fever (RVF) occurred in Mauritania in 1998, 2003, 2010 and 2012 which caused lots of animal and several human deaths. We investigated rainfall and vegetation conditions that might have impacted on RVF transmission over the affected regions. Our results corroborate that RVF transmission generally occurs during the months of September and October in Mauritania, similarly to Senegal. The four outbreaks were preceded by a rainless period lasting at least a week followed by heavy precipitation that took place during the second half of the rainy season. First human infections were generally reported three to five weeks later. By bridging the gap between meteorological forecasting centers and veterinary services, an early warning system might be developed in Senegal and Mauritania to warn decision makers and health services about the upcoming RVF risk. PMID:24413703

  8. Rift Valley Fever during Rainy Seasons, Madagascar, 2008 and 2009

    PubMed Central

    Andriamandimby, Soa Fy; Randrianarivo-Solofoniaina, Armand Eugène; Jeanmaire, Elisabeth M.; Ravololomanana, Lisette; Razafimanantsoa, Lanto Tiana; Rakotojoelinandrasana, Tsanta; Razainirina, Josette; Hoffmann, Jonathan; Ravalohery, Jean-Pierre; Rafisandratantsoa, Jean-Théophile; Rollin, Pierre E.

    2010-01-01

    During 2 successive rainy seasons, January 2008 through May 2008 and November 2008 through March 2009, Rift Valley fever virus (RVFV) caused outbreaks in Madagascar. Human and animal infections were confirmed on the northern and southern coasts and in the central highlands. Analysis of partial sequences from RVFV strains showed that all were similar to the strains circulating in Kenya during 2006–2007. A national cross-sectional serologic survey among slaughterhouse workers at high risk showed that RVFV circulation during the 2008 outbreaks included all of the Malagasy regions and that the virus has circulated in at least 92 of Madagascar’s 111 districts. To better predict and respond to RVF outbreaks in Madagascar, further epidemiologic studies are needed, such as RVFV complete genome analysis, ruminant movement mapping, and surveillance implementation. PMID:20507747

  9. Modeling the Spatial Spread of Rift Valley Fever in Egypt

    PubMed Central

    Gao, Daozhou; Cosner, Chris; Cantrell, Robert Stephen; Beier, John C.; Ruan, Shigui

    2013-01-01

    Rift Valley fever (RVF) is a severe viral zoonosis in Africa and the Middle East that harms both human health and livestock production. It is believed that RVF in Egypt has been repeatedly introduced by the importation of infected animals from Sudan. In this paper, we propose a three-patch model for the process by which animals enter Egypt from Sudan, are moved up the Nile, and then consumed at population centers. The basic reproduction number for each patch is introduced and then the threshold dynamics of the model are established. We simulate an interesting scenario showing a possible explanation of the observed phenomenon of the geographic spread of RVF in Egypt. PMID:23377629

  10. Ultrastructural pathology of human liver in Rift Valley fever.

    PubMed

    Shraim, Mubarak Al; Eid, Refaat; Radad, Khaled; Saeed, Noora

    2016-01-01

    Rift Valley fever (RVF) is a zoonotic disease that primarily affects ruminant animals and can also cause fatal disease in humans. In the current report, we present the ultrastructural changes in the liver of a man aged 60 years who died from RVF in the Aseer Central Hospital, Abha, Saudi Arabia. The main hepatic changes by transmission electron microscopy included the presence of 95-115 nm electron-dense particles consistent with RVF virions, nuclear condensation, vacuolar degeneration, lipid droplet accumulation and mitochondrial damage and dilation. There were also viral inclusion bodies with electron-dense aggregates, dilation of intercellular spaces, damage of sinusoidal microvilli with widening of space of Disse, dilation of bile canaliculi and increasing number of phagolysosomes. PMID:27485877

  11. Molecular biology and genetic diversity of Rift Valley fever virus

    PubMed Central

    Ikegami, Tetsuro

    2013-01-01

    Rift Valley fever virus (RVFV), a member of the family Bunyaviridae, genus Phlebovirus, is the causative agent of Rift Valley fever (RVF), a mosquito-borne disease of ruminant animals and humans. The generation of a large sequence database has facilitated studies of the evolution and spread of the virus. Bayesian analyses indicate that currently circulating strains of RVFV are descended from an ancestral species that emerged from a natural reservoir in Africa when large-scale cattle and sheep farming were introduced during the 19th century. Viruses descended from multiple lineages persist in that region, through infection of reservoir animals and vertical transmission in mosquitoes, emerging in years of heavy rainfall to cause epizootics and epidemics. On a number of occasions, viruses from these lineages have been transported outside the enzootic region through the movement of infected animals or mosquitoes, triggering outbreaks in countries such as Egypt, Saudi Arabia, Mauritania and Madagascar, where RVF had not previously been seen. Such viruses could potentially become established in their new environments through infection of wild and domestic ruminants and other animals and vertical transmission in local mosquito species. Despite their extensive geographic dispersion, all strains of RVFV remain closely related at the nucleotide and amino acid level. The high degree of conservation of genes encoding the virion surface glycoproteins suggests that a single vaccine should protect against all currently circulating RVFV strains. Similarly, preservation of the sequence of the RNA-dependent RNA polymerase across viral lineages implies that antiviral drugs targeting the enzyme should be effective against all strains. Researchers should be encouraged to collect additional RVFV isolates and perform whole-genome sequencing and phylogenetic analysis, so as to enhance our understanding of the continuing evolution of this important virus. This review forms part of a series

  12. Seismicity of the Earth 1900-2013 East African Rift

    USGS Publications Warehouse

    Hayes, Gavin P.; Jones, Eric S.; Stadler, Timothy J.; Barnhart, William D.; McNamara, Daniel E.; Benz, Harley M.; Furlong, Kevin P.; Villaseñor, Antonio

    2014-01-01

    Rifting in East Africa is not all coeval; volcanism and faulting have been an ongoing phenomenon on the continent since the Eocene (~45 Ma). The rifting began in northern East Africa, and led to the separation of the Nubia (Africa) and Arabia plates in the Red Sea and Gulf of Aden, and in the Lake Turkana area at the Kenya-Ethiopia border. A Paleogene mantle superplume beneath East Africa caused extension within the Nubia plate, as well as a first order topographic high known as the African superswell which now includes most of the eastern and southern sectors of the Nubia plate. Widespread volcanism erupted onto much of the rising plateau in Ethiopia during the Eocene-Oligocene (45–29 Ma), with chains of volcanoes forming along the rift separating Africa and Arabia. Since the initiation of rifting in northeastern Africa, the system has propagated over 3,000 km to the south and southwest, and it experiences seismicity as a direct result of the extension and active magmatism.

  13. Numerical modeling of continental rifting: Implications for the East African Rift system

    NASA Astrophysics Data System (ADS)

    Koptev, Alexander; Burov, Evgueni; Calais, Eric; Leroy, Sylvie; Gerya, Taras; Guillou-Frottier, Laurent; Cloetingh, Sierd

    2016-04-01

    The East African Rift system (EARS) provides a unique system with juxtaposition of two contrasting yet simultaneously formed rift branches, the eastern, magma-rich, and the western, magma-poor, on either side of the old thick Tanzanian craton embedded into younger lithosphere. Here we take advantage of the improvements in our understanding of deep structures, geological evolution and recent kinematics, together with new cutting edge numerical modeling techniques to design a three-dimensional ultra-high resolution viscous plastic thermo-mechanical numerical model that accounts for thermo-rheological structure of the lithosphere and hence captures the essential geophysical features of the central EARS. Based on our experiments, we show that in case of the mantle plume seeded slightly to the northeast of the craton center, the ascending plume material is deflected by the cratonic keel and preferentially channeled along the eastern side of the craton, leading to formation of a large rift zone characterized by important magmatic activity with substantial amounts of melts derived from mantle plume material. This model is in good agreement with the observations in the EARS, as it reproduces the magmatic eastern branch and at the same time, anticlockwise rotation of the craton. However, this experiment does not reproduce the observed strain localization along the western margin of the cratonic bloc. To explain the formation of contrasting magmatic and amagmatic rift branches initiating simultaneously on either side of a non-deforming block as observed in the central EARS, we experimentally explored several scenarios of which three can be retained as specifically pertaining to the EARS: (1) The most trivial first scenario assumes rheologically weak vertical interface simulating the suture zone observed in the geological structure along the western border of the craton; (2) The second scenario involves a second smaller plume initially shifted in SW direction; (3) Finally, a

  14. Seismicity Patterns and Magmatic Processes in the Rwenzori Region, East-African Rift

    NASA Astrophysics Data System (ADS)

    Lindenfeld, M.; Rumpker, G.; Schmeling, H.; Wallner, H.

    2010-12-01

    The 5000m high Rwenzori Mountains are situated within the western branch of the East African Rift System (EARS), at the border between Uganda and the Democratic Republic of Congo. They represent a basement block located within the rift valley whose origin and relation to the evolution of the EARS are highly puzzling. During a recent seismological campaign we located more than 800 earthquakes per month with magnitudes ranging from 0.5 to 5.1. Vertical sections across the northern parts of the Rwenzoris show, that west of the mountains (towards the rift valley) the focal depths range from 10 to 20 km, whereas the hypocentres go as deep as 30 km on the eastern side. This is in good agreement with Moho-depths derived from receiver functions and implies that all of these events are located within the crust. However, about 30 km east of the northern mountain ridge we located a cluster of 7 events that exhibit an anomalous depth of about 60 km. We can confidently locate these earthquakes within the mantle lithosphere beneath the rift. The existence of earthquakes at this depth is enigmatic, especially within a rifting regime were one expects hot and weak material relatively close to the surface. We think that these events are possibly related to the evolution of the Rwenzori Mountains. A recent hypothesis to explain the extreme uplift of the Rwenzori Mountains is rift induced delamination (RID) of mantle lithosphere. Here we show that the RID-process is indeed capable of explaining the seismic energy release in the mantle. However, in view of the specific hypocentral location of the event cluster, magmatic impregnation processes associated with dyke propagation into the mantle lithosphere may be a more realistic cause for seismic radiation at the observed depth. Crustal earthquakes northeast of the Rwenzori area are relocated with a double-difference algorithm to improve the spatial resolution of seismicity pattern. Several event clusters in the vicinity of the Fort

  15. Potential for North American Mosquitoes (Diptera: Culicidae) to Transmit Rift Valley Fever Virus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    To determine which biting insects should be targeted for control should Rift Valley fever virus (RVFV) be detected in North America, we evaluated Culex erraticus, Culex erythrothorax, Culex pipiens, Culex quinquefasciatus, Culex tarsalis, Aedes dorsalis, Aedes vexans, Anopheles quadrimaculatus, and ...

  16. Gravity study of the Central African Rift system: A model of continental disruption 1. The Ngaoundere and Abu Gabra Rifts

    NASA Astrophysics Data System (ADS)

    Browne, S. E.; Fairhead, J. D.

    1983-05-01

    A regional compilation of published and unpublished gravity data for Central Africa is presented and reveals the presence of a major rift system, called here, the Central African Rift System. It is proposed that the junction area between the Ngaoundere and Abu Gabra rift arms in Western Sudan forms an incipient intraplate, triple-junction with the as yet unfractured, but domally uplifted and volcanically active, Darfur swell. It is only the Darfur swell that shows any similarities to the uplift and rift history of East Africa. The other two rifts arms are considered to be structurally similar to the early stages of passive margin development and thus reflect more closely the initial processes of continental fragmentation than the structures associated with rifting in East Africa.

  17. Hydrothermal vents in Lake Tanganyika, East African, Rift system

    NASA Astrophysics Data System (ADS)

    Tiercelin, Jean-Jacques; Pflumio, Catherine; Castrec, Maryse; Boulégue, Jacques; Gente, Pascal; Rolet, Joël; Coussement, Christophe; Stetter, Karl O.; Huber, Robert; Buku, Sony; Mifundu, Wafula

    1993-06-01

    Sublacustrine hydrothermal vents with associated massive sulfides were discovered during April 1987 at Pemba and Cape Banza on the Zaire side of the northern basin of Lake Tanganyika, East African Rift system. New investigations by a team of ten scuba divers during the multinational (France, Zaire, Germany, and Burundi) TANGANYDRO expedition (August-October 1991) found hydrothermal vents down to a depth of 46 m along north-trending active faults bounding the Tanganyika rift on the western side. Temperatures from 53 to 103 °C were measured in hydrothermal fluids and sediments. Veins of massive sulfides 1-10 cm thick (pyrite and marcasite banding) were found associated with vents at the Pemba site. At Cape Banza,active vents are characterized by 1-70-cm-high aragonite chimneys, and there are microcrystalline pyrite coatings on the walls of hydrothermal pipes. Hydrothermal fluid end members show distinctive compositions at the two sites. The Pemba end member is a NaHCO3-enriched fluid similar to the NaHCO3 thermal fluids from lakes Magadi and Bogoria in the eastern branch off the rift. The Cape Banza end member is a solution enriched in NaCl. Such brines may have a deep-seated basement origin, as do the Uvinza NaCl brines on the eastern flank of the Tanganyika basin. Geothermometric calculations have yielded temperatures of fluid-rock interaction off 219 and 179 °C in the Pemba and Cape Banza systems, respectively. Abundant white or reddish-brown microbial colonies resembling Beggiatoa mats were found surrounding the active vents. Thermal fluid circulation is permitted by opening of cracks related to 130 °N normal-dextral faults that intersect the north- south major rift trend. The source of heat for such hydrothermal systems may relate to the existence of magmatic bodies under the rift, which is suggested by the isotopic composition of carbon dioxide released at Pemba and Cape Banza.

  18. Mapping of the major structures of the African rift system

    NASA Technical Reports Server (NTRS)

    Mohr, P. A. (Principal Investigator)

    1972-01-01

    The author has identified the following significant results. ERTS-1 imagery of the African rift system resolves the major Cenozoic faults, zones of warping, and the associated volcanism. It also clearly depicts the crustal grain of the Precambrian rocks where these are exposed. New structural features, or new properties of known features such as greater extent, continuity, linearity, etc., are revealed by the ERTS-1 imagery. This applies to the NE-SW fracture zones in Yemen, the Aswa mylonite zone at the northern end of the Western Rift, the Nandi fault of western Kenya, the arcuate faults of the Elgeyo escarpment in the Gregory rift, and hemi-basins of warped Tertiary lavas on the Red Sea margin of Yemen, matching those of the Ethiopian plateau-Afar margin. A tentative scheme is proposed, relating the effect on the pattern of Cenozoic faulting of the degree of obliquity to Precambrian structural trend. Some ground-mapped lithological boundaries are obscure on ERTS-1 imagery. The present approaches to mapping of Precambrian terrain in Africa may require radical revision with the input of satellite imagery.

  19. A Haploid Genetic Screen Identifies Heparan Sulfate Proteoglycans Supporting Rift Valley Fever Virus Infection

    PubMed Central

    Riblett, Amber M.; Blomen, Vincent A.; Jae, Lucas T.; Altamura, Louis A.; Doms, Robert W.; Brummelkamp, Thijn R.

    2015-01-01

    ABSTRACT Rift Valley fever virus (RVFV) causes recurrent insect-borne epizootics throughout the African continent, and infection of humans can lead to a lethal hemorrhagic fever syndrome. Deep mutagenesis of haploid human cells was used to identify host factors required for RVFV infection. This screen identified a suite of enzymes involved in glycosaminoglycan (GAG) biogenesis and transport, including several components of the cis-oligomeric Golgi (COG) complex, one of the central components of Golgi complex trafficking. In addition, disruption of PTAR1 led to RVFV resistance as well as reduced heparan sulfate surface levels, consistent with recent observations that PTAR1-deficient cells exhibit altered Golgi complex morphology and glycosylation defects. A variety of biochemical and genetic approaches were utilized to show that both pathogenic and attenuated RVFV strains require GAGs for efficient infection on some, but not all, cell types, with the block to infection being at the level of virion attachment. Examination of other members of the Bunyaviridae family for GAG-dependent infection suggested that the interaction with GAGs is not universal among bunyaviruses, indicating that these viruses, as well as RVFV on certain cell types, employ additional unidentified virion attachment factors and/or receptors. IMPORTANCE Rift Valley fever virus (RVFV) is an emerging pathogen that can cause severe disease in humans and animals. Epizootics among livestock populations lead to high mortality rates and can be economically devastating. Human epidemics of Rift Valley fever, often initiated by contact with infected animals, are characterized by a febrile disease that sometimes leads to encephalitis or hemorrhagic fever. The global burden of the pathogen is increasing because it has recently disseminated beyond Africa, which is of particular concern because the virus can be transmitted by widely distributed mosquito species. There are no FDA-licensed vaccines or antiviral

  20. An Assembly Model of Rift Valley Fever Virus

    PubMed Central

    Rusu, Mirabela; Bonneau, Richard; Holbrook, Michael R.; Watowich, Stanley J.; Birmanns, Stefan; Wriggers, Willy; Freiberg, Alexander N.

    2012-01-01

    Rift Valley fever virus (RVFV) is a bunyavirus endemic to Africa and the Arabian Peninsula that infects humans and livestock. The virus encodes two glycoproteins, Gn and Gc, which represent the major structural antigens and are responsible for host cell receptor binding and fusion. Both glycoproteins are organized on the virus surface as cylindrical hollow spikes that cluster into distinct capsomers with the overall assembly exhibiting an icosahedral symmetry. Currently, no experimental three-dimensional structure for any entire bunyavirus glycoprotein is available. Using fold recognition, we generated molecular models for both RVFV glycoproteins and found significant structural matches between the RVFV Gn protein and the influenza virus hemagglutinin protein and a separate match between RVFV Gc protein and Sindbis virus envelope protein E1. Using these models, the potential interaction and arrangement of both glycoproteins in the RVFV particle was analyzed, by modeling their placement within the cryo-electron microscopy density map of RVFV. We identified four possible arrangements of the glycoproteins in the virion envelope. Each assembly model proposes that the ectodomain of Gn forms the majority of the protruding capsomer and that Gc is involved in formation of the capsomer base. Furthermore, Gc is suggested to facilitate intercapsomer connections. The proposed arrangement of the two glycoproteins on the RVFV surface is similar to that described for the alphavirus E1-E2 proteins. Our models will provide guidance to better understand the assembly process of phleboviruses and such structural studies can also contribute to the design of targeted antivirals. PMID:22837754

  1. Rift Valley Fever Virus Infection in Golden Syrian Hamsters

    PubMed Central

    Scharton, Dionna; Van Wettere, Arnaud J.; Bailey, Kevin W.; Vest, Zachary; Westover, Jonna B.; Siddharthan, Venkatraman; Gowen, Brian B.

    2015-01-01

    Rift Valley fever virus (RVFV) is a formidable pathogen that causes severe disease and abortion in a variety of livestock species and a range of disease in humans that includes hemorrhagic fever, fulminant hepatitis, encephalitis and blindness. The natural transmission cycle involves mosquito vectors, but exposure can also occur through contact with infected fluids and tissues. The lack of approved antiviral therapies and vaccines for human use underlies the importance of small animal models for proof-of-concept efficacy studies. Several mouse and rat models of RVFV infection have been well characterized and provide useful systems for the study of certain aspects of pathogenesis, as well as antiviral drug and vaccine development. However, certain host-directed therapeutics may not act on mouse or rat pathways. Here, we describe the natural history of disease in golden Syrian hamsters challenged subcutaneously with the pathogenic ZH501 strain of RVFV. Peracute disease resulted in rapid lethality within 2 to 3 days of RVFV challenge. High titer viremia and substantial viral loads were observed in most tissues examined; however, histopathology and immunostaining for RVFV antigen were largely restricted to the liver. Acute hepatocellular necrosis associated with a strong presence of viral antigen in the hepatocytes indicates that fulminant hepatitis is the likely cause of mortality. Further studies to assess the susceptibility and disease progression following respiratory route exposure are warranted. The use of the hamsters to model RVFV infection is suitable for early stage antiviral drug and vaccine development studies. PMID:25607955

  2. Rift Valley Fever: An Emerging Mosquito-Borne Disease.

    PubMed

    Linthicum, Kenneth J; Britch, Seth C; Anyamba, Assaf

    2016-01-01

    Rift Valley fever (RVF), an emerging mosquito-borne zoonotic infectious viral disease caused by the RVF virus (RVFV) (Bunyaviridae: Phlebovirus), presents significant threats to global public health and agriculture in Africa and the Middle East. RVFV is listed as a select agent with significant potential for international spread and use in bioterrorism. RVFV has caused large, devastating periodic epizootics and epidemics in Africa over the past ∼60 years, with severe economic and nutritional impacts on humans from illness and livestock loss. In the past 15 years alone, RVFV caused tens of thousands of human cases, hundreds of human deaths, and more than 100,000 domestic animal deaths. Cattle, sheep, goats, and camels are particularly susceptible to RVF and serve as amplifying hosts for the virus. This review highlights recent research on RVF, focusing on vectors and their ecology, transmission dynamics, and use of environmental and climate data to predict disease outbreaks. Important directions for future research are also discussed. PMID:26982443

  3. Protein Phosphatase-1 regulates Rift Valley fever virus replication.

    PubMed

    Baer, Alan; Shafagati, Nazly; Benedict, Ashwini; Ammosova, Tatiana; Ivanov, Andrey; Hakami, Ramin M; Terasaki, Kaori; Makino, Shinji; Nekhai, Sergei; Kehn-Hall, Kylene

    2016-03-01

    Rift Valley fever virus (RVFV), genus Phlebovirus family Bunyaviridae, is an arthropod-borne virus endemic throughout sub-Saharan Africa. Recent outbreaks have resulted in cyclic epidemics with an increasing geographic footprint, devastating both livestock and human populations. Despite being recognized as an emerging threat, relatively little is known about the virulence mechanisms and host interactions of RVFV. To date there are no FDA approved therapeutics or vaccines for RVF and there is an urgent need for their development. The Ser/Thr protein phosphatase 1 (PP1) has previously been shown to play a significant role in the replication of several viruses. Here we demonstrate for the first time that PP1 plays a prominent role in RVFV replication early on during the viral life cycle. Both siRNA knockdown of PP1α and a novel PP1-targeting small molecule compound 1E7-03, resulted in decreased viral titers across several cell lines. Deregulation of PP1 was found to inhibit viral RNA production, potentially through the disruption of viral RNA transcript/protein interactions, and indicates a potential link between PP1α and the viral L polymerase and nucleoprotein. These results indicate that PP1 activity is important for RVFV replication early on during the viral life cycle and may prove an attractive therapeutic target. PMID:26801627

  4. Chimpanzee Adenovirus Vaccine Provides Multispecies Protection against Rift Valley Fever

    PubMed Central

    Warimwe, George M.; Gesharisha, Joseph; Carr, B. Veronica; Otieno, Simeon; Otingah, Kennedy; Wright, Danny; Charleston, Bryan; Okoth, Edward; Elena, Lopez-Gil; Lorenzo, Gema; Ayman, El-Behiry; Alharbi, Naif K.; Al-dubaib, Musaad A.; Brun, Alejandro; Gilbert, Sarah C.; Nene, Vishvanath; Hill, Adrian V. S.

    2016-01-01

    Rift Valley Fever virus (RVFV) causes recurrent outbreaks of acute life-threatening human and livestock illness in Africa and the Arabian Peninsula. No licensed vaccines are currently available for humans and those widely used in livestock have major safety concerns. A ‘One Health’ vaccine development approach, in which the same vaccine is co-developed for multiple susceptible species, is an attractive strategy for RVFV. Here, we utilized a replication-deficient chimpanzee adenovirus vaccine platform with an established human and livestock safety profile, ChAdOx1, to develop a vaccine for use against RVFV in both livestock and humans. We show that single-dose immunization with ChAdOx1-GnGc vaccine, encoding RVFV envelope glycoproteins, elicits high-titre RVFV-neutralizing antibody and provides solid protection against RVFV challenge in the most susceptible natural target species of the virus-sheep, goats and cattle. In addition we demonstrate induction of RVFV-neutralizing antibody by ChAdOx1-GnGc vaccination in dromedary camels, further illustrating the potency of replication-deficient chimpanzee adenovirus vaccine platforms. Thus, ChAdOx1-GnGc warrants evaluation in human clinical trials and could potentially address the unmet human and livestock vaccine needs. PMID:26847478

  5. Climate-disease connections: Rift Valley Fever in Kenya

    NASA Technical Reports Server (NTRS)

    Anyamba, A.; Linthicum, K. J.; Tucker, C. J.

    2001-01-01

    All known Rift Valley fever(RVF) outbreaks in Kenya from 1950 to 1998 followed periods of abnormally high rainfall. On an interannual scale, periods of above normal rainfall in East Africa are associated with the warm phase of the El Nino/Southern Oscillation (ENSO) phenomenon. Anomalous rainfall floods mosquito-breeding habitats called dambos, which contain transovarially infected mosquito eggs. The eggs hatch Aedes mosquitoes that transmit the RVF virus preferentially to livestock and to humans as well. Analysis of historical data on RVF outbreaks and indicators of ENSO (including Pacific and Indian Ocean sea surface temperatures and the Southern Oscillation Index) indicates that more than three quarters of the RVF outbreaks have occurred during warm ENSO event periods. Mapping of ecological conditions using satellite normalized difference vegetation index (NDVI) data show that areas where outbreaks have occurred during the satellite recording period (1981-1998) show anomalous positive departures in vegetation greenness, an indicator of above-normal precipitation. This is particularly observed in arid areas of East Africa, which are predominantly impacted by this disease. These results indicate a close association between interannual climate variability and RVF outbreaks in Kenya.

  6. Combining detrital geochronology and sedimentology to assess basin development in the Rukwa Rift of the East African Rift System

    NASA Astrophysics Data System (ADS)

    Hilbert-Wolf, Hannah; Roberts, Eric; Mtelela, Cassy; Downie, Bob

    2015-04-01

    We have employed a multifaceted approach to sedimentary provenance analysis in order to assess the timing and magnitude of tectonic events, sedimentation, and landscape development in the Western Branch of the East African Rift System. Our approach, termed 'Sedimentary Triple Dating', integrates: (1) U-Pb dating via LA-ICPMS; (2) fission track; and (3) (U-Th)/He thermochronology of detrital zircon and apatite. We integrate geochronology, thermochronology, and provenance analysis to relate the initiation of rifting events to regional dynamic uplift, sedimentation patterns, and interpret the far-reaching climatic and evolutionary effects of fluctuating rift flank topography in the Rukwa Rift, a segment of the Western Branch. This work provides additional data to support the recent concept of synchronous development of the Western and Eastern branches of the East African Rift System ~25 Ma, and better constrains the age, location and provenance of subsequent rifting and sedimentation events in the Rukwa Rift Basin. Investigation of well cuttings and outcrop samples from the Neogene-Recent Lake Beds Succession in the Rukwa Rift Basin revealed a suite of previously unrecognized tuffaceous deposits at the base of the succession. A population of euhedral, magmatic zircons from a basal Lake Beds tuff and Miocene-Pliocene detrital zircons from well cuttings suggest that Neogene rift reactivation and volcanism began ~9-10 Ma. This timing is consistent with demonstrated rifting in Uganda and Malawi, as well as with the initiation of volcanism in the Rungwe Volcanic Province at the southern end of the Rukwa Rift, and the estimated development of Lake Tanganyika to the north. Moreover, there appear to be a suite of unconformity bounded stratigraphic units that make up the Lower Lake Beds succession, and detrital zircon maximum depositional ages from these units suggests episodic sedimentation in the rift, punctuated by long hiatuses or uplift, rather than steady subsidence and

  7. A Recombinant Rift Valley Fever Virus Glycoprotein Subunit Vaccine Confers Full Protection against Rift Valley Fever Challenge in Sheep.

    PubMed

    Faburay, Bonto; Wilson, William C; Gaudreault, Natasha N; Davis, A Sally; Shivanna, Vinay; Bawa, Bhupinder; Sunwoo, Sun Young; Ma, Wenjun; Drolet, Barbara S; Morozov, Igor; McVey, D Scott; Richt, Juergen A

    2016-01-01

    Rift Valley fever virus (RVFV) is a mosquito-borne zoonotic pathogen causing disease outbreaks in Africa and the Arabian Peninsula. The virus has great potential for transboundary spread due to the presence of competent vectors in non-endemic areas. There is currently no fully licensed vaccine suitable for use in livestock or humans outside endemic areas. Here we report the evaluation of the efficacy of a recombinant subunit vaccine based on the RVFV Gn and Gc glycoproteins. In a previous study, the vaccine elicited strong virus neutralizing antibody responses in sheep and was DIVA (differentiating naturally infected from vaccinated animals) compatible. In the current efficacy study, a group of sheep (n = 5) was vaccinated subcutaneously with the glycoprotein-based subunit vaccine candidate and then subjected to heterologous challenge with the virulent Kenya-128B-15 RVFV strain. The vaccine elicited high virus neutralizing antibody titers and conferred complete protection in all vaccinated sheep, as evidenced by prevention of viremia, fever and absence of RVFV-associated histopathological lesions. We conclude that the subunit vaccine platform represents a promising strategy for the prevention and control of RVFV infections in susceptible hosts. PMID:27296136

  8. A Recombinant Rift Valley Fever Virus Glycoprotein Subunit Vaccine Confers Full Protection against Rift Valley Fever Challenge in Sheep

    PubMed Central

    Faburay, Bonto; Wilson, William C.; Gaudreault, Natasha N.; Davis, A. Sally; Shivanna, Vinay; Bawa, Bhupinder; Sunwoo, Sun Young; Ma, Wenjun; Drolet, Barbara S.; Morozov, Igor; McVey, D. Scott; Richt, Juergen A.

    2016-01-01

    Rift Valley fever virus (RVFV) is a mosquito-borne zoonotic pathogen causing disease outbreaks in Africa and the Arabian Peninsula. The virus has great potential for transboundary spread due to the presence of competent vectors in non-endemic areas. There is currently no fully licensed vaccine suitable for use in livestock or humans outside endemic areas. Here we report the evaluation of the efficacy of a recombinant subunit vaccine based on the RVFV Gn and Gc glycoproteins. In a previous study, the vaccine elicited strong virus neutralizing antibody responses in sheep and was DIVA (differentiating naturally infected from vaccinated animals) compatible. In the current efficacy study, a group of sheep (n = 5) was vaccinated subcutaneously with the glycoprotein-based subunit vaccine candidate and then subjected to heterologous challenge with the virulent Kenya-128B-15 RVFV strain. The vaccine elicited high virus neutralizing antibody titers and conferred complete protection in all vaccinated sheep, as evidenced by prevention of viremia, fever and absence of RVFV-associated histopathological lesions. We conclude that the subunit vaccine platform represents a promising strategy for the prevention and control of RVFV infections in susceptible hosts. PMID:27296136

  9. Exploring Crustal Structure and Mantle Seismic Anisotropy Associated with the Incipient Southern and Southwestern Branches of the East African Rift System

    NASA Astrophysics Data System (ADS)

    Yu, Y.; Reed, C. A.; Gao, S. S.; Liu, K. H.; Massinque, B.; Mdala, H. S.; Chindandali, P. R. N.; Moidaki, M.; Mutamina, D. M.

    2014-12-01

    In spite of numerous geoscientific studies, the mechanisms responsible for the initiation and development of continental rifts are still poorly understood. The key information required to constrain various geodynamic models on rift initiation can be derived from the crust/mantle structure and anisotropy beneath incipient rifts such as the Southern and Southwestern branches of the East African Rift System. As part of a National Science Foundation funded interdisciplinary project, 50 PASSCAL broadband seismic stations were deployed across the Malawi, Luangwa, and Okavango rift zones from the summer of 2012 to the summer of 2014. Preliminary results from these 50 SAFARI (Seismic Arrays for African Rift Initiation) and adjacent stations are presented utilizing shear-wave splitting (SWS) and P-S receiver function techniques. 1109 pairs of high-quality SWS measurements, consisting of fast polarization orientations and splitting times, have been obtained from a total of 361 seismic events. The results demonstrate dominantly NE-SW fast orientations throughout Botswana as well as along the northwestern flank of the Luangwa rift valley. Meanwhile, fast orientations beneath the eastern Luangwa rift flank rotate from NNW to NNE along the western border of the Malawi rift. Stations located alongside the western Malawi rift border faults yield ENE fast orientations, with stations situated in Mozambique exhibiting more E-W orientations. In the northern extent of the study region, fast orientations parallel the trend of the Rukwa and Usangu rift basins. Receiver function results reveal that, relative to the adjacent Pan-African mobile belts, the Luangwa rift zone has a thin (30 to 35 km) crust. The crustal thickness within the Okavango rift basin is highly variable. Preliminary findings indicate a northeastward thinning along the southeast Okavango border fault system congruent with decreasing extension toward the southwest. The Vp/Vs measurements in the Okavango basin are roughly

  10. Ambient noise tomography of the East African Rift in Mozambique

    NASA Astrophysics Data System (ADS)

    Domingues, Ana; Silveira, Graça; Ferreira, Ana M. G.; Chang, Sung-Joon; Custódio, Susana; Fonseca, João F. B. D.

    2016-03-01

    Seismic ambient noise tomography is applied to central and southern Mozambique, located in the tip of the East African Rift (EAR). The deployment of MOZART seismic network, with a total of 30 broad-band stations continuously recording for 26 months, allowed us to carry out the first tomographic study of the crust under this region, which until now remained largely unexplored at this scale. From cross-correlations extracted from coherent noise we obtained Rayleigh wave group velocity dispersion curves for the period range 5-40 s. These dispersion relations were inverted to produce group velocity maps, and 1-D shear wave velocity profiles at selected points. High group velocities are observed at all periods on the eastern edge of the Kaapvaal and Zimbabwe cratons, in agreement with the findings of previous studies. Further east, a pronounced slow anomaly is observed in central and southern Mozambique, where the rifting between southern Africa and Antarctica created a passive margin in the Mesozoic, and further rifting is currently happening as a result of the southward propagation of the EAR. In this study, we also addressed the question concerning the nature of the crust (continental versus oceanic) in the Mozambique Coastal Plains (MCP), still in debate. Our data do not support previous suggestions that the MCP are floored by oceanic crust since a shallow Moho could not be detected, and we discuss an alternative explanation for its ocean-like magnetic signature. Our velocity maps suggest that the crystalline basement of the Zimbabwe craton may extend further east well into Mozambique underneath the sediment cover, contrary to what is usually assumed, while further south the Kaapval craton passes into slow rifted crust at the Lebombo monocline as expected. The sharp passage from fast crust to slow crust on the northern part of the study area coincides with the seismically active NNE-SSW Urema rift, while further south the Mazenga graben adopts an N-S direction

  11. Hydrothermal vents is Lake Tanganyika, East African Rift system

    SciTech Connect

    Tiercelin, J.J.; Pflumio, C.; Castrec, M.

    1993-06-01

    Sublacustrine hydrothermal vents with associated massive sulfides were discovered during April 1987 at Pemba and Cape Banza on the Zaire side of the northern basin of Lake Tanganyika, East African Rift system. New investigations by a team of ten scuba divers during the multinational (France, Zaire, Germany, and Burundi) TANGANYDRO expedition (August-October 1991) found hydrothermal vents down to a depth of 46 m along north-trending active faults bounding the Tanganyika rift on the western side. Temperatures from 53 to 103 {degrees}C were measured in hydrothermal fluids and sediments. Veins of massive sulfides 1-10 cm thick (pyrite and marcasite banding) were found associated with vents at the Pemba site. At Cape Banza, active vents are characterized by 1-70-cm-high aragonite chimneys, and there are microcrystalline pyrite coatings on the walls of hydrothermal pipes. Hydrothermal fluid end members show distinctive compositions at the two sites. The Pemba end member is a NaHCO{sub 3}-enriched fluid similar to the NaHCO{sub 3} thermal fluids form lakes Magadi and Bogoria in the eastern branch of the rift. The Cape Banza end member is a solution enriched in NaCl. Such brines may have a deep-seated basement origin, as do the Uvinza NaCl brines on the eastern flank of the Tanganyika basin. Geothermometric calculations have yielded temperatures of fluid-rock interaction of 219 and 179 {degrees}C in the Pemba and Cape Banza systems, respectively. Abundant white or reddish-brown microbial colonies resembling Beggiatoa mats were found surrounding the active vents. Thermal fluid circulation is permitted by opening of cracks related to 130{degrees}N normal-dextral faults that intersect the north-south major rift trend. The sources of heat for such hydrothermal systems may relate to the existence of magmatic bodies under the rift, which is suggested by the isotopic composition of carbon dioxide released at Pemba and Cape Banza. 21 refs., 2 figs.

  12. Rift Valley fever outbreak--Kenya, November 2006-January 2007.

    PubMed

    2007-02-01

    In mid-December 2006, several unexplained fatalities associated with fever and generalized bleeding were reported to the Kenya Ministry of Health (KMOH) from Garissa District in North Eastern Province (NEP). By December 20, a total of 11 deaths had been reported. Of serum samples collected from the first 19 patients, Rift Valley fever (RVF) virus RNA or immunoglobulin M (IgM) antibodies against RVF virus were found in samples from 10 patients; all serum specimens were negative for yellow fever, Ebola, Crimean-Congo hemorrhagic fever, and dengue viruses. The outbreak was confirmed by isolation of RVF virus from six of the specimens. Humans can be infected with RVF virus from bites of mosquitoes or other arthropod vectors that have fed on animals infected with RVF virus, or through contact with viremic animals, particularly livestock. Reports of livestock deaths and unexplained animal abortions in NEP provided further evidence of an RVF outbreak. On December 20, an investigation was launched by KMOH, the Kenya Field Epidemiology and Laboratory Training Program (FELTP), the Kenya Medical Research Institute (KEMRI), the Walter Reed Project of the U.S. Army Medical Research Unit, CDC-Kenya's Global Disease Detection Center, and other partners, including the World Health Organization (WHO) and Médecins Sans Frontières (MSF). This report describes the findings from that initial investigation and the control measures taken in response to the RVF outbreak, which spread to multiple additional provinces and districts, resulting in 404 cases with 118 deaths as of January 25, 2007. PMID:17268404

  13. Evaporation estimation of rift valley lakes: comparison of models.

    PubMed

    Melesse, Assefa M; Abtew, Wossenu; Dessalegne, Tibebe

    2009-01-01

    Evapotranspiration (ET) accounts for a substantial amount of the water flux in the arid and semi-arid regions of the World. Accurate estimation of ET has been a challenge for hydrologists, mainly because of the spatiotemporal variability of the environmental and physical parameters governing the latent heat flux. In addition, most available ET models depend on intensive meteorological information for ET estimation. Such data are not available at the desired spatial and temporal scales in less developed and remote parts of the world. This limitation has necessitated the development of simple models that are less data intensive and provide ET estimates with acceptable level of accuracy. Remote sensing approach can also be applied to large areas where meteorological data are not available and field scale data collection is costly, time consuming and difficult. In areas like the Rift Valley regions of Ethiopia, the applicability of the Simple Method (Abtew Method) of lake evaporation estimation and surface energy balance approach using remote sensing was studied. The Simple Method and a remote sensing-based lake evaporation estimates were compared to the Penman, Energy balance, Pan, Radiation and Complementary Relationship Lake Evaporation (CRLE) methods applied in the region. Results indicate a good correspondence of the models outputs to that of the above methods. Comparison of the 1986 and 2000 monthly lake ET from the Landsat images to the Simple and Penman Methods show that the remote sensing and surface energy balance approach is promising for large scale applications to understand the spatial variation of the latent heat flux. PMID:22303142

  14. Response to Rift Valley Fever in Tanzania: Challenges and Opportunities.

    PubMed

    Fyumagwa, Robert D; Ezekiel, Mangi J; Nyaki, Athanas; Mdaki, Maulid L; Katale, Zablon B; Moshiro, Candida; Keyyu, Julius D

    2011-12-01

    Rift Valley Fever (RVF) is an arthropod borne viral disease affecting livestock (cattle, sheep, goats and camels), wildlife and humans caused by Phlebovirus. The disease occurs in periodic cycles of 4-15 years associated with flooding from unusually high precipitations in many flood-prone habitats. Aedes and Culex spp and other mosquito species are important epidemic vectors. Because of poor living conditions and lack of knowledge on the pathogenesis of RVF, nomadic pastoralists and agro-pastoralists are at high risk of contracting the disease during epidemics. RVF is a professional hazard for health and livestock workers because of poor biosafety measures in routine activities including lack of proper Personal Protective Equipment (PPE). Direct exposure to infected animals can occur during handling and slaughter or through veterinary and obstetric procedures or handling of specimens in laboratory. The episodic nature of the disease creates special challenges for its mitigation and control and many of the epidemics happen when the governments are not prepared and have limited resource to contain the disease at source. Since its first description in 1930s Tanzania has recorded six epidemics, three of which were after independence in 1961. However, the 2007 epidemic was the most notable and wide spread with fatal human cases among pastoralists and agro-pastoralists concurrent with high livestock mortality. Given all the knowledge that exist on the epidemiology of the disease, still the 2006/2007 epidemic occurred when the government of Tanzania was not prepared to contain the disease at source. This paper reviews the epidemiology, reporting and outbreak-investigation, public awareness, preparedness plans and policy as well as challenges for its control in Tanzania. PMID:26591988

  15. Curcumin Inhibits Rift Valley Fever Virus Replication in Human Cells*

    PubMed Central

    Narayanan, Aarthi; Kehn-Hall, Kylene; Senina, Svetlana; Lundberg, Lindsay; Van Duyne, Rachel; Guendel, Irene; Das, Ravi; Baer, Alan; Bethel, Laura; Turell, Michael; Hartman, Amy Lynn; Das, Bhaskar; Bailey, Charles; Kashanchi, Fatah

    2012-01-01

    Rift Valley fever virus (RVFV) is an arbovirus that is classified as a select agent, an emerging infectious virus, and an agricultural pathogen. Understanding RVFV-host interactions is imperative to the design of novel therapeutics. Here, we report that an infection by the MP-12 strain of RVFV induces phosphorylation of the p65 component of the NFκB cascade. We demonstrate that phosphorylation of p65 (serine 536) involves phosphorylation of IκBα and occurs through the classical NFκB cascade. A unique, low molecular weight complex of the IKK-β subunit can be observed in MP-12-infected cells, which we have labeled IKK-β2. The IKK-β2 complex retains kinase activity and phosphorylates an IκBα substrate. Inhibition of the IKK complex using inhibitors impairs viral replication, thus alluding to the requirement of an active IKK complex to the viral life cycle. Curcumin strongly down-regulates levels of extracellular infectious virus. Our data demonstrated that curcumin binds to and inhibits kinase activity of the IKK-β2 complex in infected cells. Curcumin partially exerts its inhibitory influence on RVFV replication by interfering with IKK-β2-mediated phosphorylation of the viral protein NSs and by altering the cell cycle of treated cells. Curcumin also demonstrated efficacy against ZH501, the fully virulent version of RVFV. Curcumin treatment down-regulated viral replication in the liver of infected animals. Our data point to the possibility that RVFV infection may result in the generation of novel versions of host components (such as IKK-β2) that, by virtue of altered protein interaction and function, qualify as unique therapeutic targets. PMID:22847000

  16. Latitudinal Hydrologic Variability Along the East African Rift, Over the Past 200 Kyr

    NASA Astrophysics Data System (ADS)

    Scholz, C. A.

    2014-12-01

    Within the deep sediments of the large lakes of Africa's Great Rift Valley are continuous environmental records of remarkable antiquity and fidelity. Not only do stratigraphic sections from these basins extend back millions of years, many of the intervals represented contain high-resolution material of decadal resolution or better. East African lake basins remain sparsely sampled however, with only a few long and continuous records available. Our ability to image the lakes using seismic reflection methods greatly exceeds our opportunities for coring and drilling however; assessing stratal relationships observed in the geophysical data permits powerful inferences about past hydrologic changes. With intensive hydrocarbon exploration work underway in East Africa, industry well data can also help constrain and ground truth basin histories. Substantial spatio-temporal hydrologic variability is observed in East African basins over the past 200 kyr. Paleohydrological changes in the late Pleistocene and early Holocene are now well constrained in the northern hemisphere East African topics, with widespread aridity and in some cases lake desiccation observed during Heinrich Event 1. A climate recovery followed in the northern hemisphere East African tropics, with the early Holocene African Humid Period a time of positive water balance across most of the rift valley. The paleohydrology of southern hemisphere tropical East Africa is more equivocal, for instance with negligible draw-down of Lake Malawi at HE1. Whereas these late Pleistocene events represent substantial climate reorganizations, severe droughts during the middle-late Pleistocene (150-65 kyr BP) were far more intense, and produced much more severe drawdowns of Lakes Malawi and Tanganyika. Scientific drill cores, kullenberg cores, and extensive seismic reflection data sets from Lakes Malawi and Tanganyika provide indisputable evidence for lowstands of -500m and -600 m respectively. Climate changes that lowered the

  17. Serological evidence in sheep suggesting phlebovirus circulation in a Rift Valley fever enzootic area in Burkina Faso.

    PubMed

    Gonzalez, J P; Le Guenno, B; Some, M J; Akakpo, J A

    1992-01-01

    Within the Phlebovirus serogroup, Rift Valley fever (RVF) virus is endemo-enzootic in the African sahelian zone. Recently an RVF epizootic in West Africa prompted a serosurvey in the major sheep and cattle raising areas. Because of the close antigenic relationship between the phleboviruses it appeared of interest to evaluate the prevalence of the other phleboviruses also. In 1987, 482 sheep serum samples were collected in 2 different ecological zones of Burkina Faso and tested for the presence of phlebovirus antibodies. A sensitive but non-specific immunofluorescent antibody test and a specific enzyme-linked immunosorbent assay (ELISA) were used, with the following African phlebovirus antigens: Rift Valley fever (RVF), Arumowot, Gabek Forest, Gordil, Saint Floris and Odrenisrou. A total of 15.8% of the sera sampled had anti-RVF antibody in the ELISA. RVF virus appeared to be more active in drier areas such as the sahelian region, known to be an enzootic area for the disease. Antibodies to other phleboviruses were found in 11.8% of the samples, independent of RVF virus activity. It is assumed that sheep can be infected by different phleboviruses. PMID:1287944

  18. Mapping of the major structures of the African rift system

    NASA Technical Reports Server (NTRS)

    Mohr, P. A. (Principal Investigator)

    1973-01-01

    The author has identified the following significant results. Lake Tara lies within a previously recognized asymmetric graben situated on the Ethiopian plateau and about 250 km west of the plateau-Afar margin. ERTS-1 imagery confirms the stronger deformation of the western side of the Tara graben, with intense faulting and some associated monoclinal mapping extending between latitudes 12 deg and 14 deg N, and lying close to meridian 37 deg E. The zone of deformation is gently arcuate in plan, trending NNE in the south NNW in the north. In the north, the Quaternary faulting dies out in the alluvial plains of the Takazze Valley; in the south the faulting appears to die out in coincidence with a large erosional escapement trending S30W from Lake Tara to precisely latitude 11 deg N. This escapement aligns with the massive NE-SW escapement of western Simien, northeast of Lake Tara, and may represent erosional recession from major faulting and tilting much older than that of the superimposed, obliquely trending Tara graben. A 30 km diameter circular feature has been identified from the ERTS-1 imagery of the Tara graben, centered on 13 deg 05 min N, 37 deg 20 min E. ERTS-1 imagery further shows that the Tara graben and its associated young volcanics have no direct connection with the Red Sea or Ethiopian rift valley.

  19. Potency of a thermostabilised chimpanzee adenovirus Rift Valley Fever vaccine in cattle.

    PubMed

    Dulal, Pawan; Wright, Daniel; Ashfield, Rebecca; Hill, Adrian V S; Charleston, Bryan; Warimwe, George M

    2016-04-29

    Development of safe and efficacious vaccines whose potency is unaffected by long-term storage at ambient temperature would obviate major vaccine deployment hurdles and limit wastage associated with breaks in the vaccine cold chain. Here, we evaluated the immunogenicity of a novel chimpanzee adenovirus vectored Rift Valley Fever vaccine (ChAdOx1-GnGc) in cattle, following its thermostabilisation by slow desiccation on glass fiber membranes in the non-reducing sugars trehalose and sucrose. Thermostabilised ChAdOx1-GnGc vaccine stored for 6 months at 25, 37 or 45 ° C elicited comparable Rift Valley Fever virus neutralising antibody titres to those elicited by the 'cold chain' vaccine (stored at -80 ° C throughout) at the same dose, and these were within the range associated with protection against Rift Valley Fever in cattle. The results support the use of sugar-membrane thermostabilised vaccines in target livestock species. PMID:27020712

  20. 77 FR 68783 - Prospective Grant of Co-Exclusive License: Veterinary Vaccines for Rift Valley Fever Virus

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-11-16

    ...: Veterinary Vaccines for Rift Valley Fever Virus AGENCY: Centers for Disease Control and Prevention (CDC.../016,065, filed 12/21/2007, entitled ``Development of Rift Valley Fever Virus Utilizing Reverse... (RVF) Viruses and Method of Use,'' PCT Application PCT/US2008/087023, filed 12/16/2008,...

  1. Mapping the Risk of Rift Valley fever re-emergence in Southern Africa using remote sensing data

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever is a viral disease of animals and humans that occurs throughout sub-Saharan Africa, Egypt and the Arabian Peninsula. Outbreaks of the disease are episodic and closely linked to climate variability, especially widespread elevated rainfall that facilitates Rift Valley fever virus tra...

  2. Serologic evidence of exposure to Rift Valley fever virus detected in Tunisia

    PubMed Central

    Bosworth, A.; Ghabbari, T.; Dowall, S.; Varghese, A.; Fares, W.; Hewson, R.; Zhioua, E.; Chakroun, M.; Tiouiri, H.; Ben Jemaa, M.; Znazen, A.; Letaief, A.

    2015-01-01

    Rift Valley fever virus (RVFv) is capable of causing dramatic outbreaks amongst economically important animal species and is capable of causing severe symptoms and mortality in humans. RVFv is known to circulate widely throughout East Africa; serologic evidence of exposure has also been found in some northern African countries, including Mauritania. This study aimed to ascertain whether RVFv is circulating in regions beyond its known geographic range. Samples from febrile patients (n = 181) and nonfebrile healthy agricultural and slaughterhouse workers (n = 38) were collected during the summer of 2014 and surveyed for exposure to RVFv by both serologic tests and PCR. Of the 219 samples tested, 7.8% of nonfebrile participants showed immunoglobulin G reactivity to RVFv nucleoprotein and 8.3% of febrile patients showed immunoglobulin M reactivity, with the latter samples indicating recent exposure to the virus. Our results suggest an active circulation of RVFv and evidence of human exposure in the population of Tunisia. PMID:26740887

  3. Crustal and mantle structure and anisotropy beneath the incipient segments of the East African Rift System: Preliminary results from the ongoing SAFARI

    NASA Astrophysics Data System (ADS)

    Yu, Y.; Reed, C. A.; Gao, S. S.; Liu, K. H.; Massinque, B.; Mdala, H. S.; moidaki, M.; Mutamina, D. M.; Atekwana, E. A.; Ingate, S. F.; Reusch, A.; Barstow, N.

    2013-12-01

    Despite the vast wealth of research conducted toward understanding processes associated with continental rifting, the extent of our knowledge is derived primarily from studies focused on mature rift systems, such as the well-developed portions of the East African Rift System (EARS) north of Lake Malawi. To explore the dynamics of early rift evolution, the SAFARI (Seismic Arrays for African Rift Initiation) team deployed 50 PASSCAL broadband seismic stations across the Malawi, Luangwa, and Okavango rifts of the EARS during the summer of 2012. The cumulative length of the profiles is about 2500 km and the planned recording duration is 2 years. Here we present the preliminary results of systematic analyses of data obtained from the first year of acquisition for all 50 stations. A total of 446 high-quality shear-wave splitting measurements using PKS, SKKS, and SKS phases from 84 teleseismic events were used to constrain fast polarization directions and splitting times throughout the region. The Malawi and Okavango rifts are characterized by mostly NE trending fast directions with a mean splitting time of about 1 s. The fast directions on the west side of the Luangwa Rift Zone are parallel to the rift valley, and those on the east side are more N-S oriented. Stacking of approximately 1900 radial receiver functions reveals significant spatial variations of both crustal thickness and the ratio of crustal P and S wave velocities, as well as the thickness of the mantle transition zone. Stations situated within the Malawi rift demonstrate a southward increase in observed crustal thickness, which is consistent with the hypothesis that the Malawi rift originated at the northern end of the rift system and propagated southward. Both the Okavango and Luangwa rifts are associated with thinned crust and increased Vp/Vs, although additional data is required at some stations to enhance the reliability of the observations. Teleseismic P-wave travel-time residuals show a delay of about

  4. Negative gravity anomaly over spreading rift valleys: Mid-Atlantic Ridge at 26°N

    NASA Astrophysics Data System (ADS)

    Bowin, Carl; Milligan, Julie

    1985-03-01

    A pronounced negative free-air gravity anomaly commonly occurs over the median valley of slow spreading ocean ridges. Previous results, using Wiener filtering and cross-spectral analysis techniques for the Mid-Atlantic Ridge, obtained estimates of the elastic plate thickness in the range of 7-13 km and the existence of a residual negative gravity anomaly over the median rift valley, suggesting that the rift valley has a response function different than the remainder of the spreading ridge. In this paper we have improved the derivation of the topography-gravity admittance function for spreading ocean crust by carefully avoiding several sources of spectral splattering when processing the data: (1) selecting data from a cruise that followed a flowline of central North Atlantic relative plate motion and hence is least corrupted by fracture zones; and (2) accounting for the difference in distance between the gravity meter and the regional variation in elevation as the ridge crest is traversed. Improvements of lesser importance include the use of cubic splines to interpolate to equally spaced data rather than linear interpolation, and correction of the free-air anomaly values for long-wavelength variations of the indirect effect. Comparison of the resulting admittance function to elastic flexure response functions suggests an elastic plate thickness of about 8 km. The improved admittance function, when convolved with the ridge topography, provides a predicted gravity profile that accounts very well for the negative anomaly over the rift valley. Therefore, the isostatic response function for the rift valley is similar to that for the topography away from the rift valley.

  5. Temperature-sensitive mutations for live-attenuated Rift Valley fever vaccines: implications from other RNA viruses

    PubMed Central

    Nishiyama, Shoko; Ikegami, Tetsuro

    2015-01-01

    Rift Valley fever (RVF) is a mosquito-borne zoonotic disease endemic to the African continent. RVF is characterized by high rate of abortions in ruminants and hemorrhagic fever, encephalitis, or blindness in humans. RVF is caused by the Rift Valley fever virus (RVFV: genus Phlebovirus, family Bunyaviridae). Vaccination is the only known effective strategy to prevent the disease, but there are no licensed RVF vaccines available for humans. A live-attenuated vaccine candidate derived from the wild-type pathogenic Egyptian ZH548 strain, MP-12, has been conditionally licensed for veterinary use in the U.S. MP-12 displays a temperature-sensitive (ts) phenotype and does not replicate at 41°C. The ts mutation limits viral replication at a specific body temperature and may lead to an attenuation of the virus. Here we will review well-characterized ts mutations for RNA viruses, and further discuss the potential in designing novel live-attenuated vaccines for RVF. PMID:26322023

  6. Rift Valley Fever: International Coordinated Efforts from Early Warning to Rapid Responses

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Scientists at the USDA, ARS, Arthropod-Borne Animal Diseases Research Laboratory (ABADRL) initiated research to develop operator-safe, rapid diagnostic tests and develop large animal models for both virulent and vaccine strains of Rift Valley Fever (RVF). The ABADRL currently does not have biologica...

  7. Factors Affecting the Ability of American Mosquitoes to Transmit Rift Valley Fever Virus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The recent outbreaks of disease caused by Rift Valley fever virus (RVFV) in Kenya, Mauritania, Yemen, Tanzania, Somalia, and Madagascar indicate the potential for RVFV to cause severe disease in both humans and domestic animals and its potential to be introduced into new areas, including North Ameri...

  8. Potential for North American Mosquitoes to Transmit Rift Valley Fever Virus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The recent outbreaks of disease caused by Rift Valley fever virus (RVFV) in Kenya, Mauritania, Yemen, Tanzania, Somalia, and Madagascar indicate the potential for RVFV to cause severe disease in both humans and domestic animals and its potential to be introduced into new areas, including North Ameri...

  9. Potential for North American mosquitoes to transmit Rift Valley fever virus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The recent outbreaks of disease caused by Rift Valley fever virus (RVFV) in Kenya, Mauritania, Yemen, Tanzania, Somalia, and Madagascar indicate the potential for RVFV to cause severe disease in both humans and domestic animals and its potential to be introduced into new areas, possibly even North A...

  10. Mosquito host choices on livestock amplifiers of Rift Valley fever virus in Kenya

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Animal hosts may vary in their attraction and acceptability as components of the host location process for assessing biting rates of vectors and risk of exposure to pathogens. However, these parameters remain poorly understood for mosquito vectors of the Rift Valley fever (RVF), an arboviral disease...

  11. Pupils' Environmental Awareness and Knowledge: A Springboard for Action in Primary Schools in Kenya's Rift Valley

    ERIC Educational Resources Information Center

    Mutisya, Sammy M.; Barker, Miles

    2011-01-01

    This study was carried out with 276 standard eight pupils in eleven primary schools in the rural town of Narok in Kenya's Rift Valley. It evaluated their awareness of key environmental issues in their local area and their knowledge about the causes, effects and solutions pertaining to these environmental issues. A descriptive research design was…

  12. Potential for mosquitoes (Diptera: Culicidae) from Florida to transmit rift valley fever virus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    We evaluated 8 species of mosquitoes collected in Florida to determine which of these should be targeted for control should Rift Valley fever virus (RVFV) be detected in North America. Female mosquitoes that had fed on adult hamsters inoculated with RVFV were incubated for 7-21 d at 26°C, allowed to...

  13. CURRENT ISSUES AND CONCERNS REGARDING RIFT VALLEY FEVER, AN EMERGING VIRUS THREAT

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF) virus is a mosquito-borne zoonotic hemorrhagic disease that causes 100% abortions in cattle, sheep, and goats and is often fatal to young animals. Though currently confined mainly to Africa this disease could be introduced into the U.S. and spread via mosquitoes at least as ...

  14. USDA, ARS, ABDRL Research on Countermeasures for Rift Valley Fever Virus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The United State Department of Agriculture, Agriculture Research Service has recently established research program to address countermeasures for of Rift Valley fever (RVF) virus (RVFV). The recent outbreak in Kenya, Tanzania and Somalia demonstrates the impact this virus can have on human and live...

  15. Effect of environmental temperature on the vector competence of mosquitoes for Rift Valley fever virus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Environmental temperature has been shown to affect the ability of mosquitoes to transmit numerous arboviruses and for Rift Valley fever virus (RVFV) in particular. We evaluated the effect of incubation temperatures ranging from 14-26ºC on infection, dissemination, and transmission rates for Culex ta...

  16. Mosquitoes and the environment in Nile Delta villages with previous rift valley fever activity

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Egypt is affected by serious human and animal mosquito-borne diseases such as Rift Valley fever (RVF). We investigated how potential RVF virus mosquito vector populations are affected by environmental conditions in the Nile Delta region of Egypt by collecting mosquitoes and environmental data from t...

  17. Immunohistochemical Detection of Rift Valley Fever Virus with Non-Infectious, Recombinant Viral Protein Antibodies

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever virus (RVFV) causes re-emerging disease outbreaks and abortion storms in mature cattle, sheep, and goats, and can cause 100% mortality in young animals. The spread of this exotic, insect transmitted virus is of particular concern because of its widely recognized potential for being...

  18. New Diagnostic Tools for Detecting Rift Valley Fever (RVF) and other Arboviruses

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The outbreak of West Nile virus in the United Sates and the recent outbreak of Rift Valley fever (RVF) virus in East Africa have highlighted the need for validated early detection tools for arthropod-borne animal diseases. The Arthropod-Borne Animal Diseases Research Laboratory (ABADRL) has been inv...

  19. Comparison of Rift Valley fever virus replication in North American livestock and wildlife cell lines

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever virus (RVFV) causes outbreaks of endemic disease across Africa and the Arabian Peninsula, resulting in high morbidity and mortality among young domestic livestock, frequent abortions in pregnant animals, and potentially severe or fatal disease in humans. The possibility of RVFV spr...

  20. Experimental infection of calves by two genetically-distinct strains of rift valley fever virus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Recent outbreaks of Rift Valley fever in ruminant livestock, characterized by mass abortion and high mortality rates in neonates, have raised international interest in improving vaccine control strategies. Previously we developed a reliable challenge model for sheep that improves the evaluation of ...

  1. Evaluation of lamb and calf responses to Rift Valley fever MP-12 vaccination

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF) is an important viral disease of animals and humans in Africa and the Middle East that is transmitted by mosquitoes. The disease is of concern to international agricultural and public health communities. The RVF MP-12 strain has been the most safety tested attenuated vaccine ...

  2. Utility of Antibody Avidity for Rift Valley Fever Virus Vaccine Potency and Immunogenicity Studies

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Disease outbreaks caused by arthropod-borne animal viruses (arboviruses) resulting in significant livestock and economic losses world-wide appear to be increasing. Rift Valley fever (RVF) virus is an important arbovirus that causes lethal disease in cattle, camels, sheep and goats in sub-Saharan Afr...

  3. Potential for Psorophora columbiae and Psorophora ciliata mosquitoes (Diptera: Culicidae) to transmit Rift Valley fever virus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever virus (RVFV) continues to pose a threat to much of the world. Unlike many arboviruses, numerous mosquito species have been associated with RVFV in nature, and many species have been demonstrated as competent vectors in the laboratory. In this study, we evaluated two field-collect...

  4. Development of a Rift Valley fever virus viremia challenge model in sheep and goats

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift valley fever virus (RVFV), a member of the family Bunyaviridae, causes severe to fatal disease in newborn ruminants, as well as abortions in pregnant animals; both preventable by vaccination. Availability of a challenge model is a pre-requisite for vaccine efficacy trials. Several modes of ino...

  5. One Health –One World Approaches to Detection and Control of Rift Valley Fever

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF) is a disease of animals and humans that occurs in Africa and the Arabian Peninsula. A Phlebovirus in the family Bunyaviridae causes the disease that is transmitted by mosquitoes. Epidemics occur during years of unusually heavy rainfall that assessment models are being develop...

  6. Current Status on the Development of Operator Safe Diagnostic Tools for Rift Valley Fever

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF) is a disease of animals and humans that occurs in Africa and the Arabian Peninsula. It is caused by a Phlebovirus in the family Bunyaviridae. Mosquito-borne epidemics occur during years of unusually heavy rainfall. Domestic cattle, sheep and goats are highly susceptible to...

  7. A Glycoprotein Subunit Vaccine Elicits a Strong Rift Valley Fever Virus Neutralizing Antibody Response in Sheep

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever virus (RVFV), a member of the Bunyaviridae family, is a mosquito-borne zoonotic pathogen that causes serious morbidity and mortality in livestock and humans. The recent spread of the virus beyond its traditional endemic boundaries in Africa to the Arabian Peninsula coupled with the...

  8. Development of Enzyme-Linked Immunosorbent Assays Using Expressed Proteins of Rift Valley Fever Virus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever virus (RVFV) is a member of the genus Phlebovirus, family Bunyaviridae that can cause severe disease in both humans and animals. The disease is enzootic in sub-Saharan Africa and RVFV epidemics/epizootics occur periodically, primarily in eastern and southern Africa. Since the virus...

  9. Blood Meal Analysis of Mosquitoes Involved in a Rift Valley fever Outbreak

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Background: Rift Valley fever (RVF) is a zoonosis of domestic ruminants in Africa. Bloodfed mosquitoes collected during the 2006-2007 RVF outbreak in Kenya were analyzed to determine the virus infection status and animal source of the bloodmeals. Bloodmeals from individual mosquito abdomens were sc...

  10. Rift Valley fever risk map model and seroprevalence in selected wild ungulates and camels from Kenya

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Since the first isolation of Rift Valley fever virus (RVFV) in the 1930s, there have been multiple epizootics and epidemics in animals and humans in sub-Saharan Africa. Prospective climate-based models have recently been developed that flag areas at risk of RVFV transmission in endemic regions based...

  11. Rift Valley Fever Virus Control: Integration of Virus, Host and Vector Studies

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF) is a disease of animals and humans that occurs in Africa and the Arabian Peninsula. It is caused by a Phlebovirus in the family Bunyaviridae. Mosquito-borne epizootics occur during years of unusually heavy rainfall. Domestic cattle, sheep and goats are highly susceptible to i...

  12. Potential for stable flies and house flies (Diptera: Muscidae) to transmit Rift Valley fever virus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF), a disease of ruminants and humans, has been responsible for large outbreaks in Africa that have resulted in hundreds of thousands of human infections and major economic disruption due to loss of livestock and to trade restrictions. As indicated by the rapid spread of West N...

  13. Early-stage rifting in the southwest East African Rift: Insights from new reflection seismic data from Lakes Tanganyika and Malawi (Nyasa)

    NASA Astrophysics Data System (ADS)

    Scholz, C. A.; Wood, D. A.; Shillington, D. J.; McCartney, T.; Accardo, N. J.

    2015-12-01

    The western branch of the East African Rift is characterized by modest amounts of mainly amagmatic extension; deeply-subsided, fault-controlled basins; and large-magnitude, deep seismicity. Lakes Tanganyika and Malawi are two of the world's largest lakes, with maximum water depths of 1450 and 700 m respectively. Newly acquired seismic reflection data, along with newly reprocessed legacy data reveal thick sedimentary sections, in excess of 5 km in some localities. The 1980's vintage legacy data from Project PROBE have been reprocessed through pre-stack depth migration in Lake Tanganyika, and similar reprocessing of legacy data from Lake Malawi is forthcoming. New high-fold and large-source commercial and academic data have recently been collected in southern Lake Tanganyika, and in the northern and central basins of Lake Malawi as part of the 2015 SEGMeNT project. In the case of Lake Tanganyika, new data indicate the presence of older sediment packages that underlie previously identified "pre-rift" basement (the "Nyanja Event"). These episodes of sedimentation and extension may substantially predate the modern lake. These deep stratal reflections are absent in many localites, possibly on account of attenuation of the acoustic signal. However in one area of southern Lake Tanganyika, the newly-observed deep strata extend axially for ~70 km, likely representing deposits from a discrete paleolake. The high-amplitude Nyanja Event is interpreted as the onset of late-Cenozoic rifting, and the changing character of the overlying depositional sequences reflects increasing relief in the rift valley, as well as the variability of fluvial inputs, and the intermittent connectivity of upstream lake catchments. Earlier Tanganyika sequences are dominated by shallow lake and fluvial-lacustrine facies, whereas later sequences are characterized by extensive gravity flow deposition in deep water, and pronounced erosion and incision in shallow water depths and on littoral platforms. The

  14. Antigenic and genetic relationships among Rift Valley fever virus and other selected members of the genus Phlebovirus (Bunyaviridae).

    PubMed

    Xu, Fangling; Liu, Dongying; Nunes, Marcio R T; DA Rosa, Amelia P A Travassos; Tesh, Robert B; Xiao, Shu-Yuan

    2007-06-01

    Preliminary serologic data indicated that two South American phleboviruses (Belterra virus [BELTV] and Icoaraci virus [ICOV]) may be related to Rift Valley fever virus (RVFV), an African phlebovirus that causes severe hepatitis and hemorrhagic fever in humans. To further define this relationship and to investigate the underlying genetic basis, comparative serologic and genetic sequence analyses were performed with RVFV and five other New World phleboviruses (ICOV, BELTV, Salobo virus, Joa virus, and Frijoles virus). Serologically, a one-way cross reaction was confirmed between antibodies against these New World viruses and RVFV antigen. In contrast, phylogenetic analysis demonstrated clear separation of these viruses from RVFV, into distinct phylogenies, based on sequences of the small, medium, and large RNA segments. PMID:17556635

  15. Rift valley Fever in Kruger national park: do buffalo play a role in the inter-epidemic circulation of virus?

    PubMed

    Beechler, B R; Bengis, R; Swanepoel, R; Paweska, J T; Kemp, A; van Vuren, P Jansen; Joubert, J; Ezenwa, V O; Jolles, A E

    2015-02-01

    Rift Valley fever (RVF) is a zoonotic mosquito-borne virus disease of livestock and wild ruminants that has been identified as a risk for international spread. Typically, the disease occurs in geographically limited outbreaks associated with high rainfall events and can cause massive losses of livestock. It is unclear how RVF virus persists during inter-epidemic periods but cryptic cycling of the virus in wildlife populations may play a role. We investigated the role that free-living African buffalo (Syncerus caffer caffer) might play in inter-epidemic circulation of the virus and looked for geographic, age and sex patterns of Rift Valley fever virus (RVFV) infection in African buffalo. Buffalo serum samples were collected (n = 1615) in Kruger National Park (KNP), South Africa, during a period of 1996-2007 and tested for antibodies to RVF. We found that older animals were more likely to be seropositive for anti-RVFV antibody than younger animals, but sex was not correlated with the likelihood of being anti-RVFV antibody positive. We also found geographic variation within KNP; herds in the south were more likely to have acquired anti-RVFV antibody than herds farther north - which could be driven by host or vector ecology. In all years of the study between 1996 and 2007, we found young buffalo (under 2 years of age) that were seropositive for anti-RVFV antibody, with prevalence ranging between 0 and 27% each year, indicating probable circulation. In addition, we also conducted a 4-year longitudinal study on 227 initially RVFV seronegative buffalo to look for evidence of seroconversion outside known RVF outbreaks within our study period (2008-2012). In the longitudinal study, we found five individuals that seroconverted from anti-RVFV antibody negative to anti-RVFV antibody positive, outside of any detected outbreak. Overall, our results provide evidence of long-term undetected circulation of RVFV in the buffalo population. PMID:24330522

  16. A Spatial Analysis of Rift Valley Fever Virus Seropositivity in Domestic Ruminants in Tanzania

    PubMed Central

    Sindato, Calvin; Pfeiffer, Dirk U.; Karimuribo, Esron D.; Mboera, Leonard E. G.; Rweyemamu, Mark M.; Paweska, Janusz T.

    2015-01-01

    Rift Valley fever (RVF) is an acute arthropod-borne viral zoonotic disease primarily occurring in Africa. Since RVF-like disease was reported in Tanzania in 1930, outbreaks of the disease have been reported mainly from the eastern ecosystem of the Great Rift Valley. This cross-sectional study was carried out to describe the variation in RVF virus (RVFV) seropositivity in domestic ruminants between selected villages in the eastern and western Rift Valley ecosystems in Tanzania, and identify potential risk factors. Three study villages were purposively selected from each of the two Rift Valley ecosystems. Serum samples from randomly selected domestic ruminants (n = 1,435) were tested for the presence of specific immunoglobulin G (IgG) and M (IgM), using RVF enzyme-linked immunosorbent assay methods. Mixed effects logistic regression modelling was used to investigate the association between potential risk factors and RVFV seropositivity. The overall RVFV seroprevalence (n = 1,435) in domestic ruminants was 25.8% and speciesspecific seroprevalence was 29.7%, 27.7% and 22.0% in sheep (n = 148), cattle (n = 756) and goats (n = 531), respectively. The odds of seropositivity were significantly higher in animals sampled from the villages in the eastern than those in the western Rift Valley ecosystem (OR = 1.88, CI: 1.41, 2.51; p<0.001), in animals sampled from villages with soils of good than those with soils of poor water holding capacity (OR = 1.97; 95% CI: 1.58, 3.02; p< 0.001), and in animals which had been introduced than in animals born within the herd (OR = 5.08, CI: 2.74, 9.44; p< 0.001). Compared with animals aged 1–2 years, those aged 3 and 4–5 years had 3.40 (CI: 2.49, 4.64; p< 0.001) and 3.31 (CI: 2.27, 4.82, p< 0.001) times the odds of seropositivity. The findings confirm exposure to RVFV in all the study villages, but with a higher prevalence in the study villages from the eastern Rift Valley ecosystem. PMID:26162089

  17. Varying styles of magmatic strain accommodation across the East African Rift

    NASA Astrophysics Data System (ADS)

    Muirhead, James D.; Kattenhorn, Simon A.; Le Corvec, Nicolas

    2015-09-01

    Observations of active dike intrusions provide present day snapshots of the magmatic contribution to continental rifting. However, unravelling the contributions of upper crustal dikes over the timescale of continental rift evolution is a significant challenge. To address this issue, we analyzed the morphologies and alignments of >1500 volcanic cones to infer the distribution and trends of upper crustal dikes in various rift basins across the East African Rift (EAR). Cone lineament data reveal along-axis variations in the distribution and geometries of dike intrusions as a result of changing tectonomagmatic conditions. In younger (<10 Ma) basins of the North Tanzanian Divergence, dikes are largely restricted to zones of rift-oblique faulting between major rift segments, referred to here as transfer zones. Cone lineament trends are highly variable, resulting from the interplay between (1) the regional stress field, (2) local magma-induced stress fields, and (3) stress rotations related to mechanical interactions between rift segments. We find similar cone lineament trends in transfer zones in the western branch of the EAR, such as the Virunga Province, Democratic Republic of the Congo. The distributions and orientations of upper crustal dikes in the eastern branch of the EAR vary during continental rift evolution. In early-stage rifts (<10 Ma), upper crustal dikes play a limited role in accommodating extension, as they are confined to areas in and around transfer zones. In evolved rift basins (>10 Ma) in Ethiopia and the Kenya Rift, rift-parallel dikes accommodate upper crustal extension along the full length of the basin.

  18. The Epidemiology of Rift Valley Fever in Mayotte: Insights and Perspectives from 11 Years of Data

    PubMed Central

    Métras, Raphaëlle; Cavalerie, Lisa; Dommergues, Laure; Mérot, Philippe; Edmunds, W. John; Keeling, Matt J.; Cêtre-Sossah, Catherine; Cardinale, Eric

    2016-01-01

    Rift Valley fever (RVF) is a zoonotic arboviral disease that is a threat to human health, animal health and production, mainly in Sub-Saharan Africa. RVF virus dynamics have been poorly studied due to data scarcity. On the island of Mayotte in the Indian Ocean, off the Southeastern African coast, RVF has been present since at least 2004. Several retrospective and prospective serological surveys in livestock have been conducted over eleven years (2004–15). These data are collated and presented here. Temporal patterns of seroprevalence were plotted against time, as well as age-stratified seroprevalence. Results suggest that RVF was already present in 2004–07. An epidemic occurred between 2008 and 2010, with IgG and IgM peak annual prevalences of 36% in 2008–09 (N = 142, n = 51, 95% CI [17–55]) and 41% (N = 96, n = 39, 95% CI [25–56]), respectively. The virus seems to be circulating at a low level since 2011, causing few new infections. In 2015, about 95% of the livestock population was susceptible (IgG annual prevalence was 6% (N = 584, n = 29, 95% CI [3–10])). Monthly rainfall varied a lot (2–540mm), whilst average temperature remained high with little variation (about 25–30°C). This large dataset collected on an insular territory for more than 10 years, suggesting a past epidemic and a current inter-epidemic period, represents a unique opportunity to study RVF dynamics. Further data collection and modelling work may be used to test different scenarios of animal imports and rainfall pattern that could explain the observed epidemiological pattern and estimate the likelihood of a potential re-emergence. PMID:27331402

  19. The Epidemiology of Rift Valley Fever in Mayotte: Insights and Perspectives from 11 Years of Data.

    PubMed

    Métras, Raphaëlle; Cavalerie, Lisa; Dommergues, Laure; Mérot, Philippe; Edmunds, W John; Keeling, Matt J; Cêtre-Sossah, Catherine; Cardinale, Eric

    2016-06-01

    Rift Valley fever (RVF) is a zoonotic arboviral disease that is a threat to human health, animal health and production, mainly in Sub-Saharan Africa. RVF virus dynamics have been poorly studied due to data scarcity. On the island of Mayotte in the Indian Ocean, off the Southeastern African coast, RVF has been present since at least 2004. Several retrospective and prospective serological surveys in livestock have been conducted over eleven years (2004-15). These data are collated and presented here. Temporal patterns of seroprevalence were plotted against time, as well as age-stratified seroprevalence. Results suggest that RVF was already present in 2004-07. An epidemic occurred between 2008 and 2010, with IgG and IgM peak annual prevalences of 36% in 2008-09 (N = 142, n = 51, 95% CI [17-55]) and 41% (N = 96, n = 39, 95% CI [25-56]), respectively. The virus seems to be circulating at a low level since 2011, causing few new infections. In 2015, about 95% of the livestock population was susceptible (IgG annual prevalence was 6% (N = 584, n = 29, 95% CI [3-10])). Monthly rainfall varied a lot (2-540mm), whilst average temperature remained high with little variation (about 25-30°C). This large dataset collected on an insular territory for more than 10 years, suggesting a past epidemic and a current inter-epidemic period, represents a unique opportunity to study RVF dynamics. Further data collection and modelling work may be used to test different scenarios of animal imports and rainfall pattern that could explain the observed epidemiological pattern and estimate the likelihood of a potential re-emergence. PMID:27331402

  20. Multiproxy Evidence for a Positive Hydrological Budget during the Little Ice Age in the East African Rift, Kenya

    NASA Astrophysics Data System (ADS)

    Goman, M.; Ashley, G. M.; Hover, V. C.; Owen, R.

    2011-12-01

    Hominin evolution took place in Africa during the Plio-Pleistocene and climate change is thought to be a factor, with Africa experiencing a general cooling and increasing aridification over the last several million years. Today, the climate of the East African Rift Valley of Kenya is characterized as semi-arid with evapotranspiration four times precipitation. Water resources are a valuable commodity for the many millions of inhabitants of the Valley. The short instrumental record shows precipitation fluctuates at sub-decadal timeframes as a result of the ENSO cycle; while during prehistory variations in monsoonal precipitation occurred on Milankovitch timescales (i.e. African Humid Period). Both timescales exhibit significant impacts on the distribution of surface water. However, little is known regarding precipitation variability over sub-millennial timescales. Emerging paleoclimate data indicates that the near surface presence of water has also varied over century length timescales. We present paleoclimate data from multiple sites along a north-south 600 km transect of the Gregory Rift Valley (Kenya) that indicate the region experienced wetter conditions during the Little Ice Age (A.D. 1400-1850). Our reconstructions of landscape and climate during this time frame rely upon a multiproxy and interdisciplinary approach. We discuss data from a variety of environmental settings (e.g. lakes, wetlands, and springs) that indicate an overall increase in hydrologic balance. Evidence is derived from biologic microfossils such as pollen, diatom and testate amoebae assemblages as well as inorganic components of the sedimentary record and geomorphic changes. The data differs significantly from studies undertaken to the west in Uganda and the Congo, where negative hydrologic balances occurred during the Little Ice Age. While the atmospheric dynamics causing this disparity are not yet recognized, interactions between the Intertropical Convergence Zone and the Congo Air Boundary

  1. Serological surveillance studies confirm the Rift Valley fever virus free status in South Korea.

    PubMed

    Kim, Hyun Joo; Park, Jee-Yong; Jeoung, Hye-Young; Yeh, Jung-Yong; Cho, Yun-Sang; Choi, Jeong-Soo; Lee, Ji-Youn; Cho, In-Soo; Yoo, Han-Sang

    2015-10-01

    Rift Valley fever is a mosquito-borne zoonotic disease of domestic ruminants. This disease causes abortions in pregnant animals, and it has a high mortality rate in newborn animals. Recently, a Rift Valley fever virus (RVFV) outbreak in the Arabian Peninsula increased its potential spread to new regions worldwide. In non-endemic or disease-free countries, early detection and surveillance are important for preventing the introduction of RVFV. In this study, a serological surveillance was conducted to detect antibodies against RVFV. A total of 2382 serum samples from goats and cattle were randomly collected from nine areas in South Korea from 2011 to 2013. These samples were tested for antibodies against RVFV, using commercial ELISA kits. None of the goats and cattle were positive for antibodies against RVFV. This finding suggests that this disease is not present in South Korea, and furthermore presents the evidence of the RVFV-free status of this country. PMID:26024956

  2. Towards a better understanding of Rift Valley fever epidemiology in the south-west of the Indian Ocean

    PubMed Central

    2013-01-01

    Rift Valley fever virus (Phlebovirus, Bunyaviridae) is an arbovirus causing intermittent epizootics and sporadic epidemics primarily in East Africa. Infection causes severe and often fatal illness in young sheep, goats and cattle. Domestic animals and humans can be contaminated by close contact with infectious tissues or through mosquito infectious bites. Rift Valley fever virus was historically restricted to sub-Saharan countries. The probability of Rift Valley fever emerging in virgin areas is likely to be increasing. Its geographical range has extended over the past years. As a recent example, autochthonous cases of Rift Valley fever were recorded in 2007–2008 in Mayotte in the Indian Ocean. It has been proposed that a single infected animal that enters a naive country is sufficient to initiate a major outbreak before Rift Valley fever virus would ever be detected. Unless vaccines are available and widely used to limit its expansion, Rift Valley fever will continue to be a critical issue for human and animal health in the region of the Indian Ocean. PMID:24016237

  3. Characterisation of immune responses and protective efficacy in mice after immunisation with Rift Valley Fever virus cDNA constructs

    PubMed Central

    Lagerqvist, Nina; Näslund, Jonas; Lundkvist, Åke; Bouloy, Michèle; Ahlm, Clas; Bucht, Göran

    2009-01-01

    Background Affecting both livestock and humans, Rift Valley Fever is considered as one of the most important viral zoonoses in Africa. However, no licensed vaccines or effective treatments are yet available for human use. Naked DNA vaccines are an interesting approach since the virus is highly infectious and existing attenuated Rift Valley Fever virus vaccine strains display adverse effects in animal trials. In this study, gene-gun immunisations with cDNA encoding structural proteins of the Rift Valley Fever virus were evaluated in mice. The induced immune responses were analysed for the ability to protect mice against virus challenge. Results Immunisation with cDNA encoding the nucleocapsid protein induced strong humoral and lymphocyte proliferative immune responses, and virus neutralising antibodies were acquired after vaccination with cDNA encoding the glycoproteins. Even though complete protection was not achieved by genetic immunisation, four out of eight, and five out of eight mice vaccinated with cDNA encoding the nucleocapsid protein or the glycoproteins, respectively, displayed no clinical signs of infection after challenge. In contrast, all fourteen control animals displayed clinical manifestations of Rift Valley Fever after challenge. Conclusion The appearance of Rift Valley Fever associated clinical signs were significantly decreased among the DNA vaccinated mice and further adjustment of this strategy may result in full protection against Rift Valley Fever. PMID:19149901

  4. The life cycle of continental rifting as a focus for U.S.-African scientific collaboration

    NASA Astrophysics Data System (ADS)

    Abdelsalam, Mohamed G.; Atekwana, Estella A.; Keller, G. Randy; Klemperer, Simon L.

    2004-11-01

    The East African Rift System (EARS) provides the unique opportunity found nowhere else on Earth, to investigate extensional processes from incipient rifting in the Okavango Delta, Botswana, to continental breakup and creation of proto-oceanic basins 3000 km to the north in the Afar Depression in Ethiopia, Eritrea, and Djibouti.The study of continental rifts is of great interest because they represent the initial stages of continental breakup and passive margin development, they are sites for large-scale sediment accumulation, and their geomorphology may have controlled human evolution in the past and localizes geologic hazards in the present. But there is little research that provides insights into the linkage between broad geodynamic processes and the life cycle of continental rifts: We do not know why some rifts evolve into mid-ocean ridges whereas others abort their evolution to become aulacogens. Numerous studies of the EARS and other continental rifts have significantly increased our understanding of rifting processes, but we particularly lack studies of the embryonic stages of rift creation and the last stages of extension when continental breakup occurs.

  5. Potency of a thermostabilised chimpanzee adenovirus Rift Valley Fever vaccine in cattle

    PubMed Central

    Dulal, Pawan; Wright, Daniel; Ashfield, Rebecca; Hill, Adrian V.S.; Charleston, Bryan; Warimwe, George M.

    2016-01-01

    Development of safe and efficacious vaccines whose potency is unaffected by long-term storage at ambient temperature would obviate major vaccine deployment hurdles and limit wastage associated with breaks in the vaccine cold chain. Here, we evaluated the immunogenicity of a novel chimpanzee adenovirus vectored Rift Valley Fever vaccine (ChAdOx1-GnGc) in cattle, following its thermostabilisation by slow desiccation on glass fiber membranes in the non-reducing sugars trehalose and sucrose. Thermostabilised ChAdOx1-GnGc vaccine stored for 6 months at 25, 37 or 45 °C elicited comparable Rift Valley Fever virus neutralising antibody titres to those elicited by the ‘cold chain’ vaccine (stored at −80 °C throughout) at the same dose, and these were within the range associated with protection against Rift Valley Fever in cattle. The results support the use of sugar-membrane thermostabilised vaccines in target livestock species. PMID:27020712

  6. The first australopithecine 2,500 kilometres west of the Rift Valley (Chad)

    PubMed

    Brunet, M; Beauvilain, A; Coppens, Y; Heintz, E; Moutaye, A H; Pilbeam, D

    1995-11-16

    The first sites with Pliocene and Pleistocene mammals west of the Rift Valley in Central Africa in northern Chad were reported in 1959 (ref. 1), and documented the presence of mixed savannah and woodland habitats. Further sites and a probable Homo erectus cranio-facial fragment were subsequently discovered. In 1993 a survey of Pliocene and Pleistocene formations in the Borkou-Ennedi-Tibesti Province of Chad (B.E.T.) led to the discovery of 17 new sites in the region of Bahr el Ghazal (classical Arabic for River of the Gazelles) near Koro Toro. One site, KT 12 (15 degrees 58'10"N, 18 degrees 52'46"E) yielded an australopithecine mandible associated with a fauna biochronologically estimated to be 3.0-3.5 Myr old. Australopithecine species described since 1925 are known from southern Africa and from sites spread along the eastern Rift Valley from Tanzania to Ethiopia (Fig. 1). This new find from Chad, which is most similar in morphology to Australopithecus afarensis, documents the presence of an early hominid a considerable distance, 2,500 km, west of the Rift Valley. PMID:7477344

  7. Structural geology of the African rift system: Summary of new data from ERTS-1 imagery. [Precambrian influence

    NASA Technical Reports Server (NTRS)

    Mohr, P. A.

    1974-01-01

    ERTS imagery reveals for the first time the structural pattern of the African rift system as a whole. The strong influence of Precambrian structures on this pattern is clearly evident, especially along zones of cataclastic deformation, but the rift pattern is seen to be ultimately independent in origin and nature from Precambrian tectonism. Continuity of rift structures from one swell to another is noted. The widening of the Gregory rift as its northern end reflects an underlying Precambrian structural divergence, and is not a consequence of reaching the swell margin. Although the Western Rift is now proven to terminate at the Aswa Mylonite Zone, in southern Sudan, lineaments extend northeastwards from Lake Albert to the Eastern Rift at Lake Stefanie. The importance of en-echelon structures in the African rifts is seen to have been exaggerated.

  8. Sheep Skin Odor Improves Trap Captures of Mosquito Vectors of Rift Valley Fever

    PubMed Central

    Tchouassi, David P.; Sang, Rosemary; Sole, Catherine L.; Bastos, Armanda D. S.; Mithoefer, Klaus; Torto, Baldwyn

    2012-01-01

    In recent years, the East African region has seen an increase in arboviral diseases transmitted by blood-feeding arthropods. Effective surveillance to monitor and reduce incidence of these infections requires the use of appropriate vector sampling tools. Here, trapped skin volatiles on fur from sheep, a known preferred host of mosquito vectors of Rift Valley fever virus (RVFV), were used with a standard CDC light trap to improve catches of mosquito vectors. We tested the standard CDC light trap alone (L), and baited with (a) CO2 (LC), (b) animal volatiles (LF), and (c) CO2 plus animal volatiles (LCF) in two highly endemic areas for RVF in Kenya (Marigat and Ijara districts) from March–June and September–December 2010. The incidence rate ratios (IRR) that mosquito species chose traps baited with treatments (LCF, LC and LF) instead of the control (L) were estimated. Marigat was dominated by secondary vectors and host-seeking mosquitoes were 3–4 times more likely to enter LC and LCF traps [IRR = 3.1 and IRR = 3.8 respectively] than the L only trap. The LCF trap captured a greater number of mosquitoes than the LC trap (IRR = 1.23) although the difference was not significant. Analogous results were observed at Ijara, where species were dominated by key primary and primary RVFV vectors, with 1.6-, 6.5-, and 8.5-fold increases in trap captures recorded in LF, LC and LCF baited traps respectively, relative to the control. These catches all differed significantly from those trapped in L only. Further, there was a significant increase in trap captures in LCF compared to LC (IRR = 1.63). Mosquito species composition and trap counts differed between the RVF sites. However, within each site, catches differed in abundance only and no species preferences were noted in the different baited-traps. Identifying the attractive components present in these natural odors should lead to development of an effective odor-bait trapping system for population density

  9. Benue trough and the mid-African rift system

    SciTech Connect

    Thomas, D.

    1996-01-29

    Large areas of the Anambra and Gongola basins have distinct petroleum exploration problems: a geologically persistent high geothermal gradient that promoted Cretaceous source rock maturation into the gas phase very early on; intrusive lead-zinc mineralization veins attributed to the Senonian igneous and folding event; and meteoric water-flushing along the periphery of the basins. From preliminary analysis, these basins have to be considered high risk for the discovery of commercial oil accumulations. On the other hand, the petroleum potential of the Bornu basins seems favorable. This Nigerian northernmost rift basin continues into the Kanem basin of western Chad, which has proven oil accumulations in Coniacian deltaic sands. Cretaceous paleofacies is considered to be relatively continuous throughout both basins. Paleo-geothermal history is also considered to be similar, although some igneous activity is recorded in the Bornu basin (Senonian?). There is a very real possibility of kerogen-rich non-marine basal Albo-Aptian basin fill lacustrine source rocks, as found in the Doba basin, could be present in the deepest sections of the Nigerian rift basins. Due to the depths involved, no well is expected to penetrate the incipient graben-fill stage sequences; however, possible oil migration from these tectono-stratigraphic units would certainly enhance the petroleum potential of cooler sections of the rift system. As opposed to interpreted thermogenic gas which seems to be prevalent in the Anambra basin.

  10. Detection of Rift Valley fever viral activity in Kenya by satellite remote sensing imagery

    NASA Technical Reports Server (NTRS)

    Linthicum, Kenneth J.; Bailey, Charles L.; Davies, F. Glyn; Tucker, Compton J.

    1987-01-01

    Data from the advanced very high resolution radiometer on board the National Oceanic and Atmospheric Administration's polar-orbiting meteorological satellites have been used to infer ecological parameters associated with Rift Valley fever (RVF) viral activity in Kenya. An indicator of potential viral activity was produced from satellite data for two different ecological regions in Kenya, where RVF is enzootic. The correlation between the satellite-derived green vegetation index and the ecological parameters associated with RVF virus suggested that satellite data may become a forecasting tool for RVF in Kenya and, perhaps, in other areas of sub-Saharan Africa.

  11. Spatial and Temporal Pattern of Rift Valley Fever Outbreaks in Tanzania; 1930 to 2007

    PubMed Central

    Sindato, Calvin; Karimuribo, Esron D.; Pfeiffer, Dirk U.; Mboera, Leonard E. G.; Kivaria, Fredrick; Dautu, George; Bernard, Bett; Paweska, Janusz T.

    2014-01-01

    Background Rift Valley fever (RVF)-like disease was first reported in Tanzania more than eight decades ago and the last large outbreak of the disease occurred in 2006–07. This study investigates the spatial and temporal pattern of RVF outbreaks in Tanzania over the past 80 years in order to guide prevention and control strategies. Materials and Methods A retrospective study was carried out based on disease reporting data from Tanzania at district or village level. The data were sourced from the Ministries responsible for livestock and human health, Tanzania Meteorological Agency and research institutions involved in RVF surveillance and diagnosis. The spatial distribution of outbreaks was mapped using ArcGIS 10. The space-time permutation model was applied to identify clusters of cases, and a multivariable logistic regression model was used to identify risk factors associated with the occurrence of outbreaks in the district. Principal Findings RVF outbreaks were reported between December and June in 1930, 1947, 1957, 1960, 1963, 1968, 1977–79, 1989, 1997–98 and 2006–07 in 39.2% of the districts in Tanzania. There was statistically significant spatio-temporal clustering of outbreaks. RVF occurrence was associated with the eastern Rift Valley ecosystem (OR = 6.14, CI: 1.96, 19.28), total amount of rainfall of >405.4 mm (OR = 12.36, CI: 3.06, 49.88), soil texture (clay [OR = 8.76, CI: 2.52, 30.50], and loam [OR = 8.79, CI: 2.04, 37.82]). Conclusion/Significance RVF outbreaks were found to be distributed heterogeneously and transmission dynamics appeared to vary between areas. The sequence of outbreak waves, continuously cover more parts of the country. Whenever infection has been introduced into an area, it is likely to be involved in future outbreaks. The cases were more likely to be reported from the eastern Rift Valley than from the western Rift Valley ecosystem and from areas with clay and loam rather than sandy soil texture. PMID:24586433

  12. Mosquitoes and the Environment in Nile Delta Villages with Previous Rift Valley Fever Activity.

    PubMed

    Zayed, Abdelbaset B; Britch, Seth C; Soliman, Mohamed I; Linthicum, Kenneth J

    2015-06-01

    Egypt is affected by serious human and animal mosquito-borne diseases such as Rift Valley fever (RVF). We investigated how potential RVF virus mosquito vector populations are affected by environmental conditions in the Nile Delta region of Egypt by collecting mosquitoes and environmental data from 3 key governorates before and after 2012 seasonal flooding. We found that environmental effects varied among species, life stages, pre- and postflood groupings, and geographic populations of the same species, and that mosquito community composition could change after flooding. Our study provides preliminary data for modeling mosquitoes and mosquito-borne diseases in the Nile Delta region. PMID:26181689

  13. Economic Assessment of Zoonotic Diseases: An Illustrative Study of Rift Valley Fever in the United States.

    PubMed

    Pendell, D L; Lusk, J L; Marsh, T L; Coble, K H; Szmania, S C

    2016-04-01

    This study evaluates the economic consequences of a Rift Valley Fever outbreak, a virus that spreads from livestock to humans, often through mosquitoes. Developing a 'one health' economic framework, economic impacts on agricultural producers and consumers, government costs of response, costs and disruptions to non-agricultural activities in the epidemiologically impacted region, and human health costs (morbidity and mortality) are estimated. We find the agricultural firms bear most of the negative economic impacts, followed by regional non-agricultural firms, human health and government. Further, consumers of agricultural products benefit from small outbreaks due to bans on agricultural exports. PMID:25052324

  14. Countermeasure development for Rift Valley fever: deletion, modification or targeting of major virulence factor NSs

    PubMed Central

    Lihoradova, Olga; Ikegami, Tetsuro

    2014-01-01

    Rift Valley fever (RVF) is a mosquito-borne zoonotic disease characterized by a high rate of abortion in ruminants, and febrile illness, hemorrhagic fever, retinitis and encephalitis in humans. RVF is caused by the RVF virus (RVFV), belonging to the genus Phlebovirus of the family Bunyaviridae. RVFV encodes a major virulence factor, NSs, which is dispensable for viral replication, yet required for evasion of host innate immune responses. RVFV NSs inhibits host gene upregulation at the transcriptional level, while promoting viral translation in the cytoplasm. In this article, we summarize the virology and pathology of RVF, and countermeasure development for RVF, with emphasis on NSs function and applications. PMID:24910709

  15. Detection of Rift Valley fever viral activity in Kenya by satellite remote sensing imagery.

    PubMed

    Linthicum, K J; Bailey, C L; Davies, F G; Tucker, C J

    1987-03-27

    Data from the advanced very high resolution radiometer on board the National Oceanic and Atmospheric Administration's polar-orbiting meteorological satellites have been used to infer ecological parameters associated with Rift Valley fever (RVF) viral activity in Kenya. An indicator of potential viral activity was produced from satellite data for two different ecological regions in Kenya, where RVF is enzootic. The correlation between the satellite-derived green vegetation index and the ecological parameters associated with RVF virus suggested that satellite data may become a forecasting tool for RVF in Kenya and, perhaps, in other areas of sub-Saharan Africa. PMID:3823909

  16. Rift Valley fever virus infection induces activation of the NLRP3 inflammasome

    PubMed Central

    Ermler, Megan E.; Traylor, Zachary; Patel, Krupen; Schattgen, Stefan A.; Vanaja, Sivapriya K.; Fitzgerald, Katherine A.; Hise, Amy G.

    2014-01-01

    Inflammasome activation is gaining recognition as an important mechanism for protection during viral infection. Here, we investigate whether Rift Valley fever virus, a negative-strand RNA virus, can induce inflammasome responses and IL-1β processing in immune cells. We have determined that RVFV induces NLRP3 inflammasome activation in murine dendritic cells, and that this process is dependent upon ASC and caspase-1. Furthermore, absence of the cellular RNA helicase adaptor protein MAVS/IPS-1 significantly reduces extracellular IL-1β during infection. Finally, direct imaging using confocal microscopy shows that the MAVS protein co-localizes with NLRP3 in the cytoplasm of RVFV infected cells. PMID:24418550

  17. Littoral sedimentation of rift lakes: an illustrated overview from the modern to Pliocene Lake Turkana (East African Rift System, Kenya)

    NASA Astrophysics Data System (ADS)

    Schuster, Mathieu; Nutz, Alexis

    2015-04-01

    Existing depositional models for rift lakes can be summarized as clastics transported by axial and lateral rivers, then distributed by fan-deltas and/or deltas into a standing water body which is dominated by settling of fine particles, and experiencing occasional coarser underflows. Even if known from paleolakes and modern lakes, reworking of clastics by alongshore drift, waves and storms are rarely considered in depositional models. However, if we consider the lake Turkana Basin (East African Rift System, Kenya) it is obvious that this vision is incomplete. Three representative time slices are considered here: the modern Lake Turkana, the Megalake Turkana which developed thanks to the African Humid Period (Holocene), and the Plio-Pleistocene highstand episodes of paleolake Turkana (Nachukui, Shungura and Koobi Fora Formations, Omo Group). First, remarkable clastic morphosedimentary structures such as beach ridges, spits, washover fans, lagoons, or wave-dominated deltas are very well developed along the shoreline of modern lake Turkana, suggesting strong hydrodynamics responsible for a major reworking of the fluvial-derived clastics all along the littoral zone (longshore and cross-shore transport) of the lake. Similarly, past hydrodynamics are recorded from prominent raised beach ridges and spits, well-preserved all around the lake, above its present water-level (~360 m asl) and up to ~455 m. These large-scale clastic morphosedimentary structures also record the maximum extent of Megalake Turkana during the African Humid Period, as well as its subsequent regression forced by the end of the Holocene climatic optimum. Several hundreds of meters of fluvial-deltaic-lacustrine deposits spanning the Pliocene-Pleistocene are exposed in the Turkana basin thanks to tectonic faulting. These deposits are world famous for their paleontological and archeological content that documents the very early story of Mankind. They also preserve several paleolake highstand episodes with

  18. Petroleum geology of rift basins in Niger, Chad, and Central African Republic

    SciTech Connect

    Genik, G.J. )

    1991-08-01

    Ten Cretaceous-Tertiary rift basins in Niger, Chad and the Central African Republic (C.A.R.) are defined and the petroleum geology is overviewed based on proprietary exploration results derived from more than one million km{sup 2} of aeromagnetics, 10,520 line-km of gravity profiles, 49,721 km of reflection seismic, and 50 exploration wells. The data were acquired by Exxon with partners Shell, Chevron, Elf, Conoco, Texaco, and Amax Oil Gas During 1969-1989. In Niger and Chad, the West African rift subsystem includes the extensional basins of Termit, Tefidet, Tenere, Grein/Kafra, N'Djel Edji, and Bongor. These rift basins contain up to 15,000 m of Cretaceous to Cenozoic continental and marine clastics. Key exploration elements are Tertiary and Cretaceous fluvial to tidal sandstone reservoirs, Tertiary and Cretaceous marine to lacustrine shale source rocks and seals, with traps in normal fault blocks and anticlinal closures. There have been six oil discoveries in the Termit basin. In C.A.R., the Central African rift subsystem incorporates the extensional Doba and transtensional Doseo and Salamat basins flanking the Borogop dextral wrench fault. These basins contain up to 7,500 m of chiefly Cretaceous continental clastics. key exploration elements are Lower and Upper Cretaceous fluvial to lacustrine sandstone reservoirs, Lower Cretaceous lacustrine shale source rocks, lacustrine to flood-plain shale and mudstone seals, with traps in mainly faulted anticlinal closures. There have been six oil discoveries in the Doba basin and three in the Doseo basin. The studied petroleum geology in the rifts of Niger, Chad, and C.A.R. indicates that potentially commercial volumes of oil remain to be discovered.

  19. Petroleum geology of rift basins in Niger, Chad, and the Central African Republic

    SciTech Connect

    Genik, G.J. )

    1991-03-01

    Ten Cretaceous-Tertiary rift basins in Niger, Chad, and the Central African Republic (C.A.R.) are defined and the petroleum geology is overviewed. This paper is based on proprietary exploration results derived from more than 1 million km{sup 2} of aeromagnetics, 10,520 line km of gravity profiles, 49,721 km of reflection seismic, and 50 exploration wells. The data were acquired by Exxon with partners Shell, Chevron, Elf, Conoco, Texaco, and Amax Oil Gas, Inc., during the years 1969-1989. In Niger and Chad, the West African rift subsystem includes the extensional basins of Termit, Tefidet, Tenere, Grein/Kafra, N'Djel Edji, and Bongor. These rift basins contain up to 15,000 m of Cretaceous to Cenozoic continental and marine clastics. Key exploration elements are Tertiary and Cretaceous fluvial to tidal sandstone reservoirs, Tertiary and Cretaceous marine to lacustrine shale source rocks, and seals, with traps in normal fault blocks and anticlinal closures. There are six oil discoveries in the Termit basin. In Chad and the C.A.R., the Central African rift subsystem incorporates the extensional Doba and transtensional Doseo and Salamat basins flanking the Borogop dextral wrench fault. These basins contain up to 7,500 m of chiefly Cretaceous continental clastics. Key exploration elements are Lower and Upper Cretaceous fluvial to lacustrine sandstone reservoirs, Lower Cretaceous lacustrine shale source rocks, lacustrine to flood plain shale and mudstone seals, with traps in mainly faulted anticlinal closures. There are six oil discoveries in the Doba basin and three in the Doseo basin. The studied petroleum geology in the rifts of Niger, Chad, and the C.A.R. indicates that potentially commercial volumes of oil remain to be discovered.

  20. Quantifying the morphometric variability of monogenetic cones in volcanic fields: the Virunga Volcanic Province, East African Rift

    NASA Astrophysics Data System (ADS)

    Poppe, Sam; Grosse, Pablo; Barette, Florian; Smets, Benoît; Albino, Fabien; Kervyn, François; Kervyn, Matthieu

    2016-04-01

    Volcanic cone fields are generally made up of tens to hundreds of monogenetic cones, sometimes related to larger polygenetic edifices, which can exhibit a wide range of morphologies and degrees of preservation. The Virunga Volcanic Province (VVP) developed itself in a transfer zone which separates two rift segments (i.e. Edward and Kivu rift) within the western branch of the East-African Rift. As the result of volcanic activity related to this tectonic regime of continental extension, the VVP hosts eight large polygenetic volcanoes, surrounded by over 500 monogenetic cones and eruptive fissures, scattered over the vast VVP lava flow fields. Some cones lack any obvious geo-structural link to a specific Virunga volcano. Using recent high-resolution satellite images (SPOT, Pléiades) and a newly created 5-m-resolution digital elevation model (TanDEM-X), we have mapped and classified all monogenetic cones and eruptive fissures of the VVP. We analysed the orientation of all mapped eruptive fissures and, using the MORVOLC program, we calculated a set of morphometric parameters to highlight systematic spatial variations in size or morphometric ratios of the cones. Based upon morphological indicators, we classified the satellite cones into 4 categories: 1. Simple cones with one closed-rim crater; 2. Breached cones with one open-rim crater; 3. Complex cones with two or more interconnected craters and overlapping cones; 4. Other edifices without a distinguishable crater or cone shape (e.g. spatter mounds and levees along eruptive fissures). The results show that cones are distributed in clusters and along alignments, in some cases parallel with the regional tectonic orientations. Contrasts in the volumes of cones positioned on the rift shoulders compared to those located on the rift valley floor can possibly be attributed to contrasts in continental crust thickness. Furthermore, higher average cone slopes in the East-VVP (Bufumbira zone) and central-VVP cone clusters suggest

  1. A new brachypterous scarab species, Orphnus longicornis (Coleoptera: Scarabaeidae: Orphninae), from the East African Rift.

    PubMed

    Frolov, Andrey; Akhmetova, Lilia

    2015-01-01

    The Afrotropical Region is the center of the diversity of the scarab beetle genus Orphnus MacLeay, 1819 (Coleoptera: Scarabaeidae: Orphninae), with 94 species occurring from Sahel in the north to Little Karoo in the south (Paulian, 1948; Petrovitz, 1971; Frolov, 2008). The East African Rift is one of the richest regions of the Afrotropics housing more than 20 species of Orphnus (Paulian, 1948; Frolov, 2013), most of which are endemic to this region. Yet the scarab beetle fauna of the East African Rift, and especially the Eastern Arc Mountains, is still inadequately studied. Examination of the material housed in the Museum of Natural History of Humboldt-Universität, Berlin, Germany (ZMHUB), revealed a series of brachypterous Orphnus beetles belonging to an undescribed species. The new species is described and illustrated below. PMID:26624632

  2. Large mammals from the Upper Neopleistocene reference sections in the Tunka rift valley, southwestern Baikal Region

    NASA Astrophysics Data System (ADS)

    Shchetnikov, A. A.; Klementiev, A. M.; Filinov, I. A.; Semeney, E. Yu.

    2015-03-01

    This work presents the data on new finds of fossil macrotheriofauna in the reference sections of the Upper Neopleistocene sediments in the Tunka rift valley (southwestern Baikal Region). The osteological material of a number of Late Neopleistocene mammals including extinct species rare for the Baikal region such as Crocuta spelaea, Panthera spelaea, and Spirocerus kiakhtensis (?) was directly dated with a radiocarbon (AMS) method. The obtained 14C data (18000-35000 years) allow one to rejuvenate significantly the upper limit of the common age interval of habitat of these animals in southern part of Eastern Siberia. Cave hyena and spiral-horned antelope lived in the Tunka rift valley in the Baikal region in Late Kargino time (37-24 ka), and cave lion survived the maximum in the Sartan cryochron in the region (21-20 ka). The study of collected paleontological collections provides a basis for selection of independent Kargino (MIS 3) faunal assemblages to use them for regional biostratigraphic analysis of Pleistocene deposits. Radiocarbon age dating of samples allows one to attribute confidently all paleofaunal remains available to the second half of the Late Pleistocene.

  3. Rift Valley fever virus (Bunyaviridae: Phlebovirus): an update on pathogenesis, molecular epidemiology, vectors, diagnostics and prevention

    PubMed Central

    Pepin, Michel; Bouloy, Michèle; Bird, Brian H.; Kemp, Alan; Paweska, Janusz

    2010-01-01

    Rift Valley fever (RVF) virus is an arbovirus in the Bunyaviridae family that, from phylogenetic analysis, appears to have first emerged in the mid-19th century and was only identified at the begininning of the 1930s in the Rift Valley region of Kenya. Despite being an arbovirus with a relatively simple but temporally and geographically stable genome, this zoonotic virus has already demonstrated a real capacity for emerging in new territories, as exemplified by the outbreaks in Egypt (1977), Western Africa (1988) and the Arabian Peninsula (2000), or for re-emerging after long periods of silence as observed very recently in Kenya and South Africa. The presence of competent vectors in countries previously free of RVF, the high viral titres in viraemic animals and the global changes in climate, travel and trade all contribute to make this virus a threat that must not be neglected as the consequences of RVF are dramatic, both for human and animal health. In this review, we present the latest advances in RVF virus research. In spite of this renewed interest, aspects of the epidemiology of RVF virus are still not fully understood and safe, effective vaccines are still not freely available for protecting humans and livestock against the dramatic consequences of this virus. PMID:21188836

  4. Correlative Gene Expression to Protective Seroconversion in Rift Valley Fever Vaccinates.

    PubMed

    Laughlin, Richard C; Drake, Kenneth L; Morrill, John C; Adams, L Garry

    2016-01-01

    Rift Valley fever Virus (RVFV), a negative-stranded RNA virus, is the etiological agent of the vector-borne zoonotic disease, Rift Valley fever (RVF). In both humans and livestock, protective immunity can be achieved through vaccination. Earlier and more recent vaccine trials in cattle and sheep demonstrated a strong neutralizing antibody and total IgG response induced by the RVF vaccine, authentic recombinant MP-12 (arMP-12). From previous work, protective immunity in sheep and cattle vaccinates normally occurs from 7 to 21 days after inoculation with arMP-12. While the serology and protective response induced by arMP-12 has been studied, little attention has been paid to the underlying molecular and genetic events occurring prior to the serologic immune response. To address this, we isolated RNA from whole blood of vaccinated calves over a time course of 21 days before and after vaccination with arMP-12. The time course RNAs were sequenced by RNASeq and bioinformatically analyzed. Our results revealed time-dependent activation or repression of numerous gene ontologies and pathways related to the vaccine induced immune response and its regulation. Additional bioinformatic analyses identified a correlative relationship between specific host immune response genes and protective immunity prior to the detection of protective serum neutralizing antibody responses. These results contribute an important proof of concept for identifying molecular and genetic components underlying the immune response to RVF vaccination and protection prior to serologic detection. PMID:26783758

  5. Correlative Gene Expression to Protective Seroconversion in Rift Valley Fever Vaccinates

    PubMed Central

    Laughlin, Richard C.; Drake, Kenneth L.; Morrill, John C.; Adams, L. Garry

    2016-01-01

    Rift Valley fever Virus (RVFV), a negative-stranded RNA virus, is the etiological agent of the vector-borne zoonotic disease, Rift Valley fever (RVF). In both humans and livestock, protective immunity can be achieved through vaccination. Earlier and more recent vaccine trials in cattle and sheep demonstrated a strong neutralizing antibody and total IgG response induced by the RVF vaccine, authentic recombinant MP-12 (arMP-12). From previous work, protective immunity in sheep and cattle vaccinates normally occurs from 7 to 21 days after inoculation with arMP-12. While the serology and protective response induced by arMP-12 has been studied, little attention has been paid to the underlying molecular and genetic events occurring prior to the serologic immune response. To address this, we isolated RNA from whole blood of vaccinated calves over a time course of 21 days before and after vaccination with arMP-12. The time course RNAs were sequenced by RNASeq and bioinformatically analyzed. Our results revealed time-dependent activation or repression of numerous gene ontologies and pathways related to the vaccine induced immune response and its regulation. Additional bioinformatic analyses identified a correlative relationship between specific host immune response genes and protective immunity prior to the detection of protective serum neutralizing antibody responses. These results contribute an important proof of concept for identifying molecular and genetic components underlying the immune response to RVF vaccination and protection prior to serologic detection. PMID:26783758

  6. Rift Valley fever virus NSs protein functions and the similarity to other bunyavirus NSs proteins.

    PubMed

    Ly, Hoai J; Ikegami, Tetsuro

    2016-01-01

    Rift Valley fever is a mosquito-borne zoonotic disease that affects both ruminants and humans. The nonstructural (NS) protein, which is a major virulence factor for Rift Valley fever virus (RVFV), is encoded on the S-segment. Through the cullin 1-Skp1-Fbox E3 ligase complex, the NSs protein promotes the degradation of at least two host proteins, the TFIIH p62 and the PKR proteins. NSs protein bridges the Fbox protein with subsequent substrates, and facilitates the transfer of ubiquitin. The SAP30-YY1 complex also bridges the NSs protein with chromatin DNA, affecting cohesion and segregation of chromatin DNA as well as the activation of interferon-β promoter. The presence of NSs filaments in the nucleus induces DNA damage responses and causes cell-cycle arrest, p53 activation, and apoptosis. Despite the fact that NSs proteins have poor amino acid similarity among bunyaviruses, the strategy utilized to hijack host cells are similar. This review will provide and summarize an update of recent findings pertaining to the biological functions of the NSs protein of RVFV as well as the differences from those of other bunyaviruses. PMID:27368371

  7. Hot Spot Induced Cenozoic Volcanism in the Upper Rajang Valley, Sarawak - Is Borneo Rifting?

    NASA Astrophysics Data System (ADS)

    Taib, N.

    2010-12-01

    The Upper Rajang Valley covers a large area in the northern interior of the island of Borneo, in the Malaysian state of Sarawak . It is underlain by the Cretaceous to Late Eocene deep to shallow marine sediments of the Rajang Group. Within this area are several Cenozoic volcanic edifices, which to date have been sparsely studied. Two distinct episodes of volcanism are recognized - the first, dated early Eocene, consists of K-rich basalts, and is represented by the Bukit Mersing volcanics, which were erupted conformably onto deep water turbidites of the Rajang Group. The second, far more extensive, is dated Pliocene to Quaternary, and is bimodal, consisting mainly of early dacite and rhyodacite tuffs, with a smaller amount of later basalt, forming several volcanic plateaus and massifs (Hose Mountains, Usun Apau, Linau-Balui, Nieuwenhuis Mountains and others). They lie unconformably over pre-Miocene sediments, the Linau-Balui basalts having been erupted onto Quaternary river terraces. Mantle-normalized REE and incompatible trace element spider plots reveal that the Bukit Mersing basalts have geochemical affinity with Oceanic Island Basalts (OIB) and rift basalts, being enriched in LREEs and Most Incompatible Elements, and no Eu anomaly. Preliminary trace element data for several basalt samples from Usun Apau also show Oceanic Island/Rift affinity. Bimodal volcanism is most often associated with rift environments. Efforts are being made to radiometrically date the volcanics, in part to determine the possibility of future eruptions. The Upper Rajang Valley is remote, covered in tropical rainforest and is very sparsely populated. At this time, there is no information concerning signs of imminent volcanism, such as hot springs and microseismicity.

  8. Earthquakes along the East African Rift System: A multiscale, system-wide perspective

    NASA Astrophysics Data System (ADS)

    Yang, Zhaohui; Chen, Wang-Ping

    2010-12-01

    On the basis of a comprehensive data set of precisely determined depths of 121 large to moderate-sized earthquakes along and near the entire East African Rift System (EARS), there are three distinct patterns in focal depths which seem to correlate with progressive stages in the development of the largest active rift in the world. First, away from both ends of the western, younger branch of the EARS, very large (Mw ≥ 7) earthquakes occurred in the top 15 km of the crust where surficial expressions of rifting are yet to appear. Curiously, there are unusually deep aftershocks reaching down to 35 ± 3 km. Second, under well-developed but amagmatic rift segments, focal depths show a bimodal distribution, with peaks centered near depths of about 15 ± 5 km and 35 ± 5 km. This pattern is present both under the main axis of the EARS, where rift zone have lengths approaching 1000 km, and beneath rift units 10 times shorter in length. Underside reflections off the Moho indicate that at least part of the second peak in seismicity is due to mantle earthquakes down to 44 ± 4 km, attesting to high differential stress in the mantle lithosphere which is capable of accumulating seismogenic, elastic strain (the "jelly sandwich" rheology). Third, beneath magmatic segments of well-developed rifts, seismicity is largely confined to the upper 15 km of the crust as observed previously, akin to the pattern along mid-ocean ridges where plastic flow due to high temperature inhibits accumulation of shear stress deep in the lithosphere.

  9. Detection and identification of Rift Valley fever virus in mosquito vectors by quantitative real-time PCR.

    PubMed

    Mwaengo, D; Lorenzo, G; Iglesias, J; Warigia, M; Sang, R; Bishop, R P; Brun, A

    2012-10-01

    Diagnostic methods allowing for rapid identification of pathogens are crucial for controlling and preventing dissemination after disease outbreaks as well as for use in surveillance programs. For arboviruses, detection of the presence of virus in their arthropod hosts is important for monitoring of viral activity and quantitative information is useful for modeling of transmission dynamics. In this study, molecular detection of Rift Valley fever virus (RVFV) in mosquito samples from the 2006 to 2007 East African outbreaks was performed using quantitative real-time PCR assay (qRT-PCR). Specific RVFV sequence-based primer/fluorogenic (TaqMan) probe sets were derived from the L and S RNA segments of the virus. Both primer-probe L and S segment-based combinations detected genomic RVFV sequences, with generally comparable levels of sensitivity. Viral loads from three mosquito species, Aedes mcintoshi, Aedes ochraceus and Mansonia uniformis were estimated and significant differences of between 5- and 1000-fold were detected between Ae. mcintoshi and M. uniformis using both the L and S primer-probe-based assays. The genetic relationships of the viral sequences in mosquito samples were established by partial M segment sequencing and assigned to the two previously described viral lineages defined by analysis of livestock isolates obtained during the 2006-2007 outbreak, confirming that similar viruses were present in both the vector and mammalian host. The data confirms the utility of qRT-PCR for identification and initial quantification of virus in mosquito samples during RVFV outbreaks. PMID:22841800

  10. The risk of Rift Valley fever virus introduction and establishment in the United States and European Union

    PubMed Central

    Rolin, Alicia I; Berrang-Ford, Lea; Kulkarni, Manisha A

    2013-01-01

    Rift Valley fever virus (RVFV) is an arthropod-borne disease resulting in severe morbidity and mortality in both human and ruminant populations. First identified in Kenya in 1930, the geographical range of RVFV has been largely constrained to the African continent, yet has recently spread to new regions, and is identified as a priority disease with potential for geographic emergence. We present a systematic literature review assessing the potential for RVFV introduction and establishment in the United States (US) and European Union (EU). Viable pathways for the introduction of RVFV include: transport of virus-carrying vectors, importation of viremic hosts and intentional entry of RVFV as a biological weapon. It is generally assumed that the risk of RVFV introduction into the US or EU is low. We argue that the risk of sporadic introduction is likely high, though currently an insufficient proportion of such introductions coincide with optimal environmental conditions. Future global trends may increase the likelihood of risk factors for RVFV spread. PMID:26038446

  11. Comparative sequence stratigraphy of low-latitude versus high-latitude lacustrine rift basins: Seismic data examples from the East African and Baikal rifts

    USGS Publications Warehouse

    Scholz, C.A.; Moore, T.C., Jr.; Hutchinson, D.R.; Golmshtok, A. Ja; Klitgord, Kim D.; Kurotchkin, A.G.

    1998-01-01

    Lakes Baikal, Malawi and Tanganyika are the world's three largest rift valley lakes and are the classic modem examples of lacustrine rift basins. All the rift lakes are segmented into half-graben basins, and seismic reflection datasets reveal how this segmentation controls the filling of the rift basins through time. In the early stages of rifting, basins are fed primarily by flexural margin and axial margin drainage systems. At the climax of syn-rift sedimentation, however, when the basins are deeply subsided, almost all the margins are walled off by rift shoulder uplifts, and sediment flux into the basins is concentrated at accommodation zone and axial margin river deltas. Flexural margin unconformities are commonplace in the tropical lakes but less so in high-latitude Lake Baikal. Lake levels are extremely dynamic in the tropical lakes and in low-latitude systems in general because of the predominance of evaporation in the hydrologic cycle in those systems. Evaporation is minimized in relation to inflow in the high-latitude Lake Baikal and in most high-latitude systems, and consequently, major sequence boundaries tend to be tectonically controlled in that type of system. The acoustic stratigraphies of the tropical lakes are dominated by high-frequency and high-amplitude lake level shifts, whereas in high-latitude Lake Baikal, stratigraphic cycles are dominated by tectonism and sediment-supply variations.

  12. The Salton Seismic Imaging Project: Tomographic characterization of a sediment-filled rift valley and adjacent ranges, southern California

    NASA Astrophysics Data System (ADS)

    Davenport, K.; Hole, J. A.; Stock, J. M.; Fuis, G. S.; Carrick, E.; Tikoff, B.

    2011-12-01

    The Salton Trough in Southern California represents the northernmost rift of the Gulf of California extensional system. Relative motion between the Pacific and North American plates is accommodated by continental rifting in step-over zones between the San Andreas, Imperial, and Cerro Prieto transform faults. Rapid sedimentation from the Colorado River has isolated the trough from the southern portion of the Gulf of California, progressively filling the subsiding rift basin. Based on data from previous seismic surveys, the pre-existing continent has ruptured completely, and a new ~22 km thick crust has been created entirely by sedimentation overlying rift-related magmatism. The MARGINS, EarthScope, and USGS-funded Salton Seismic Imaging Project (SSIP) was designed to investigate the nature of this new crust, the ongoing process of continental rifting, and associated earthquake hazards. SSIP, acquired in March 2011, comprises 7 lines of onshore seismic refraction / wide-angle reflection data, 2 lines of refraction / reflection data in the Salton Sea, and a line of broadband stations. This presentation focuses on the refraction / wide-angle reflection line across the Imperial Valley, extending ~220 km across California from Otay Mesa, near Tijuana, to the Colorado River. The data from this line includes seventeen 100-160 kg explosive shots and receivers at 100 m spacing across the Imperial Valley to constrain the structure of the Salton Trough rift basin, including the Imperial Fault. Eight larger shots (600-920 kg) at 20-35 km spacing and receivers at 200-500 m spacing extend the line across the Peninsular Ranges and the Chocolate Mountains. These data will contrast the structure of the rift to that of the surrounding crust and provide constraints on whole-crust and uppermost mantle structure. Preliminary work has included tomographic inversion of first-arrival travel times across the Valley, emphasizing a minimum-structure approach to create a velocity model of the

  13. Fault kinematics and tectonic stress in the seismically active Manyara Dodoma Rift segment in Central Tanzania Implications for the East African Rift

    NASA Astrophysics Data System (ADS)

    Macheyeki, Athanas S.; Delvaux, Damien; De Batist, Marc; Mruma, Abdulkarim

    2008-07-01

    The Eastern Branch of the East African Rift System is well known in Ethiopia (Main Ethiopian Rift) and Kenya (Kenya or Gregory Rift) and is usually considered to fade away southwards in the North Tanzanian Divergence, where it splits into the Eyasi, Manyara and Pangani segments. Further towards the south, rift structures are more weakly expressed and this area has not attracted much attention since the mapping and exploratory works of the 1950s. In November 4, 2002, an earthquake of magnitude Mb = 5.5 struck Dodoma, the capital city of Tanzania. Analysis of modern digital relief, seismological and geological data reveals that ongoing tectonic deformation is presently affecting a broad N-S trending belt, extending southward from the North Tanzanian Divergence to the region of Dodoma, forming the proposed "Manyara-Dodoma Rift segment". North of Arusha-Ngorongoro line, the rift is confined to a narrow belt (Natron graben in Tanzania) and south of it, it broadens into a wide deformation zone which includes both the Eyasi and Manyara grabens. The two-stage rifting model proposed for Kenya and North Tanzania also applies to the Manyara-Dodoma Rift segment. In a first stage, large, well-expressed topographic and volcanogenic structures were initiated in the Natron, Eyasi and Manyara grabens during the Late Miocene to Pliocene. From the Middle Pleistocene onwards, deformations related to the second rifting stage propagated southwards to the Dodoma region. These young structures have still limited morphological expressions compared to the structures formed during the first stage. However, they appear to be tectonically active as shown by the high concentration of moderate earthquakes into earthquake swarms, the distribution of He-bearing thermal springs, the morphological freshness of the fault scarps, and the presence of open surface fractures. Fault kinematic and paleostress analysis of geological fault data in basement rocks along the active fault lines show that recent

  14. Understanding the spatial and temporal distribution of potential mosquito vectors of Rift Valley fever in the U.S.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF) is a mosquito-borne zoonotic hemorrhagic viral disease confined primarily to sub-Saharan Africa. In RVF endemic regions human and livestock populations suffer prominent health and economic impacts during RVF outbreaks. RVF virus is listed as an overlap Select Agent by both ...

  15. Development of a Rift Valley fever real-time RT-PCR assay that can detect all three genome segments

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Outbreaks of Rift Valley fever in Kenya, Madagascar, Mauritania, and South Africa had devastating effects on livestock and human health. In addition, this disease is a food security issue for endemic countries. There is growing concern for the potential introduction of RVF into non-endemic countries...

  16. Prediction, Assessment of the Rift Valley fever Activity in East and Southern Africa 2006 - 2008 and Possible Vector Control Strategies

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Historical outbreaks of Rift Valley fever (RVF) since the early 1950s have been associated with cyclical patterns of the El Nino/Southern Oscillation (ENSO) phenomenon which results in elevated and widespread rainfall over the RVF endemic areas of Africa. Using satellite measurements of global and ...

  17. Assessment and recommendations for two sites with active and potential aquaculture production in Rift Valley and Coast Provinces, Kenya

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Kenya has a long history of local fish consumption. The population in the Lake Victoria area (Rift Valley Province) Northwest of Nairobi and coastal communities (Coast Province) have historically included fish in their diet. Migration from villages to urban areas and increasing commerce has created ...

  18. The geographic distribution of fluoride in surface and groundwater in Ethiopia with an emphasis on the Rift Valley.

    PubMed

    Tekle-Haimanot, Redda; Melaku, Zenebe; Kloos, Helmut; Reimann, Clemens; Fantaye, Wondwossen; Zerihun, Legesse; Bjorvatn, Kjell

    2006-08-15

    This paper analyzes the most extensive database on fluoride distribution in Ethiopia. Of the total 1438 water samples tested, 24.2% had fluoride concentrations above the 1.5 mg/l recommended optimum concentration recommended by WHO. Regionally, by far the highest fluoride levels were recorded in the Rift Valley, where 41.2% of all samples exceeded the 1.5 mg/l level. Only 1.0% of the samples from the central and northwestern highlands and 10.0% in the southeastern highlands exceeded 1.5 mg/l. Larger proportions of deep wells (50.0%) and hot springs (90.0%) than shallow wells (27.2%) and cold springs (12.6%) exceeded the 1.5 mg/l level. The highest fluoride concentrations were recorded for Rift Valley lakes Shala (264.0 mg/l) and Abijata (202.4 mg/l) and the lowest in Lake Tana, and rivers, wells and springs in the highlands. The fluoride concentrations of the Awash River, which originates in the highlands and flows through the Rift Valley, increase downstream, giving concern over the current diversion of high-fluoride water from Lake Beseka. Of the various flourosis prevention methods tried in Ethiopia, the treatment of surface water has been shown to be the most feasible and effective for towns and large commercial farms in the Rift Valley, although defluoridation methods should be considered for smaller rural communities. PMID:16360195

  19. The Example of Eastern Africa: the dynamic of Rift Valley fever and tools for monitoring virus activity

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever is a mosquito-borne viral zoonosis that primarily affects animals but also has the capacity to infect humans. Outbreaks of this disease in eastern Africa are closely associated with periods of heavy rainfall and forecasting models and early warning systems have been developed to en...

  20. Factors Related to the Motivation of Extension Agents in Kenya's Rift Valley Province. Summary of Research 76.

    ERIC Educational Resources Information Center

    Mwangi, John G.; McCaslin, N. L.

    Job satisfaction factors related to motivation of a random sample of 325 agents in Kenya's extension service in the Rift Valley Province were identified. Data were collected using a group-administered, closed-ended, forced-choice questionnaire with 105 job satisfaction, 10 motivational, and 10 personal characteristics items between January and…

  1. A Spatially Explicit Degree-day Model of Rift Valley Fever Transmission Risk in the Continental United States

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A degree-day model was used to assess the risk of Rift Valley Fever (RVF) transmission within five target states in the continental United States: California, Minnesota, Nebraska, New York, and Texas. Each state was evaluated on a 10-km grid using the average of historical daily temperature extreme...

  2. Forecasting the Temporal and Spatial Distribution of a Rift Valley fever Outbreak in East Africa: 2006-2007

    Technology Transfer Automated Retrieval System (TEKTRAN)

    El Niño/Southern Oscillation (ENSO) related climate anomalies have been shown to have a direct impact on Rift Valley fever (RVF) disease outbreaks. Knowledge of the links between ENSO driven climate anomalies and RVF can allow us to provide improved long range forecasts of an epidemic or epizootic. ...

  3. Comparison of Rift Valley fever virus and MP-12 replication in domestic livestock and North American wildlife cell lines.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever virus (RVFV) is a mosquito-transmitted pathogen that primarily affects livestock, but can also cause mild to fatal disease in humans. Currently, there is no approved vaccine for use in the United States if it were introduced. Domestic goats, sheep and cattle are susceptible hosts ...

  4. Remote Sensing Contributions to Prediction and Risk Assessment of Natural Diasters Caused by Large Scale Rift Valley fever Outbreaks

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Remotely sensed vegetation measurements for the last 30 years combined with other climate data sets such as rainfall and sea surface temperatures have come to play an important role in the study of the ecology of vector-borne diseases. We show that episodic outbreaks of Rift Valley fever are influen...

  5. Prediction, Assessment of the Rift Valley Fever Activity in East and Southern Africa 2006 - 2008 and Possible Vector Control Strategies

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Historical episodic outbreaks of Rift Valley fever (RVF) since the early 1950s have been associated with cyclical patterns (El Niño and La Niña) of El Niño Southern Oscillation (ENSO) phenomenon which results in elevated and widespread rainfall over the RVF endemic areas of Africa. Using satellite ...

  6. Sedimentary budgets of the Tanzania coastal basin and implications for uplift history of the East African rift system

    NASA Astrophysics Data System (ADS)

    Said, Aymen; Moder, Christoph; Clark, Stuart; Abdelmalak, Mohamed Mansour

    2015-11-01

    Data from 23 wells were used to quantify the sedimentary budgets in the Tanzania coastal basin in order to unravel the uplift chronology of the sourcing area located in the East African Rift System. We quantified the siliciclastic sedimentary volumes preserved in the Tanzania coastal basin corrected for compaction and in situ (e.g., carbonates) production. We found that the drainage areas, which supplied sediments to this basin, were eroded in four episodes: (1) during the middle Jurassic, (2) during the Campanian-Palaeocene, (3) during the middle Eocene and (4) during the Miocene. Three of these high erosion and sedimentation periods are more likely related to uplift events in the East African Rift System and earlier rift shoulders and plume uplifts. Indeed, rapid cooling in the rift system and high denudation rates in the sediment source area are coeval with these recorded pulses. However, the middle Eocene pulse was synchronous with a fall in the sea level, a climatic change and slow cooling of the rift flanks and thus seems more likely due to climatic and eustatic variations. We show that the rift shoulders of the East African rift system have inherited their present relief from at least three epeirogenic uplift pulses of middle Jurassic, Campanian-Palaeocene, and Miocene ages.

  7. Basement control in the development of the early cretaceous West and Central African rift system

    NASA Astrophysics Data System (ADS)

    Maurin, Jean-Christophe; Guiraud, René

    1993-12-01

    The structural framework of the Precambrian basement of the West and Central African Rift System (WCARS) is described in order to examine the role of ancient structures in the development of this Early Cretaceous rift system. Basement structures are represented in the region by large Pan-African mobile belts (built at ca. 600 Ma) surrounding the > 2 Ga West African, Congo and Sao Francisco cratons. Except for the small Gao trough (eastern Mali) located near the contact nappe of the Pan-African Iforas suture zone along the edge of the West African craton, the entire WCARS is located within the internal domains of the Pan-African mobile belts. Within these domains, two main structural features occur as the main basement control of the WCARS: (1) an extensive network of near vertical shear zones which trend north-south through the Congo, Brazil, Nigeria, Niger and Algeria, and roughly east-west through northeastern Brazil and Central Africa. The shear zones correspond to intra-continental strike-slip faults which accompanied the oblique collision between the West African, Congo, and Sao Francisco cratons during the Late Proterozoic; (2) a steep metamorphic NW-SE-trending belt which corresponds to a pre-Pan-African (ca. 730 Ma) ophiolitic suture zone along the eastern edge of the Trans-Saharian mobile belt. The post-Pan-African magmatic and tectonic evolution of the basement is also described in order to examine the state of the lithosphere prior to the break-up which occurred in the earliest Cretaceous. After the Pan-African thermo-tectonic event, the basement of the WCARS experienced a long period of intra-plate magmatic activity. This widespread magmatism in part relates to the activity of intra-plate hotspots which have controlled relative uplift, subsidence and occasionally block faulting. During the Paleozoic and the early Mesozoic, this tectonic activity was restricted to west of the Hoggar, west of Aïr and northern Cameroon. During the Late Jurassic

  8. Deriving spatial patterns from a novel database of volcanic rock geochemistry in the Virunga Volcanic Province, East African Rift

    NASA Astrophysics Data System (ADS)

    Poppe, Sam; Barette, Florian; Smets, Benoît; Benbakkar, Mhammed; Kervyn, Matthieu

    2016-04-01

    The Virunga Volcanic Province (VVP) is situated within the western branch of the East-African Rift. The geochemistry and petrology of its' volcanic products has been studied extensively in a fragmented manner. They represent a unique collection of silica-undersaturated, ultra-alkaline and ultra-potassic compositions, displaying marked geochemical variations over the area occupied by the VVP. We present a novel spatially-explicit database of existing whole-rock geochemical analyses of the VVP volcanics, compiled from international publications, (post-)colonial scientific reports and PhD theses. In the database, a total of 703 geochemical analyses of whole-rock samples collected from the 1950s until recently have been characterised with a geographical location, eruption source location, analytical results and uncertainty estimates for each of these categories. Comparative box plots and Kruskal-Wallis H tests on subsets of analyses with contrasting ages or analytical methods suggest that the overall database accuracy is consistent. We demonstrate how statistical techniques such as Principal Component Analysis (PCA) and subsequent cluster analysis allow the identification of clusters of samples with similar major-element compositions. The spatial patterns represented by the contrasting clusters show that both the historically active volcanoes represent compositional clusters which can be identified based on their contrasted silica and alkali contents. Furthermore, two sample clusters are interpreted to represent the most primitive, deep magma source within the VVP, different from the shallow magma reservoirs that feed the eight dominant large volcanoes. The samples from these two clusters systematically originate from locations which 1. are distal compared to the eight large volcanoes and 2. mostly coincide with the surface expressions of rift faults or NE-SW-oriented inherited Precambrian structures which were reactivated during rifting. The lava from the Mugogo

  9. Isotopic evidence for neogene hominid paleoenvironments in the Kenya Rift Valley

    SciTech Connect

    Kingston, J.D.; Hill, A. ); Marino, B.D. )

    1994-05-13

    Bipedality, the definitive characteristic of the earliest hominids, has been regarded as an adaptive response to a transition from forested to more-open habitats in East Africa sometime between 12 million and 5 million years ago. Analyses of the stable carbon isotopic composition ([delta][sup 13]C) of paleosol carbonate and organic matter from the Tugen Hills succession in Kenya indicate that a heterogeneous environment with a mix of C3 and C4 plants has persisted for the last 15.5 million years. Open grasslands at no time dominated this portion of the rift valley. The observed [delta][sup 13]C values offer no evidence for a shift from more-closed C3 environments to C4 grasslands habitats. If hominids evolved in East Africa during the Late Miocene, they did so in an ecologically diverse setting.

  10. Application of Droplet Digital PCR to Validate Rift Valley Fever Vaccines.

    PubMed

    Ly, Hoai J; Lokugamage, Nandadeva; Ikegami, Tetsuro

    2016-01-01

    Droplet Digital™ polymerase chain reaction (ddPCR™) is a promising technique that quantitates the absolute concentration of nucleic acids in a given sample. This technique utilizes water-in-oil emulsion technology, a system developed by Bio-Rad Laboratories that partitions a single sample into thousands of nanoliter-sized droplets and counts nucleic acid molecules encapsulated in each individual particle as one PCR reaction. This chapter discusses the applications and methodologies of ddPCR for development of Rift Valley fever (RVF) vaccine, using an example that measures RNA copy numbers of a live-attenuated MP-12 vaccine from virus stocks, infected cells, or animal blood. We also discuss how ddPCR detects a reversion mutant of MP-12 from virus stocks accurately. The use of ddPCR improves the quality control of live-attenuated vaccines in the seed lot systems. PMID:27076132

  11. Isotopic Evidence for Neogene Hominid Paleoenvironments in the Kenya Rift Valley

    NASA Astrophysics Data System (ADS)

    Kingston, John D.; Marino, Bruno D.; Hill, Andrew

    1994-05-01

    Bipedality, the definitive characteristic of the earliest hominids, has been regarded as an adaptive response to a transition from forested to more-open habitats in East Africa sometime between 12 million and 5 million years ago. Analyses of the stable carbon isotopic composition (δ13C) of paleosol carbonate and organic matter from the Tugen Hills succession in Kenya indicate that a heterogeneous environment with a mix of C3 and C4 plants has persisted for the last 15.5 million years. Open grasslands at no time dominated this portion of the rift valley. The observed δ13C values offer no evidence for a shift from more-closed C3 environments to C4 grassland habitats. If hominids evolved in East Africa during the Late Miocene, they did so in an ecologically diverse setting.

  12. Single-particle cryo-electron microscopy of Rift Valley fever virus

    SciTech Connect

    Sherman, Michael B.; Freiberg, Alexander N.; Holbrook, Michael R.; Watowich, Stanley J.

    2009-04-25

    Rift Valley fever virus (RVFV; Bunyaviridae; Phlebovirus) is an emerging human and veterinary pathogen causing acute hepatitis in ruminants and has the potential to cause hemorrhagic fever in humans. We report a three-dimensional reconstruction of RVFV vaccine strain MP-12 (RVFV MP-12) by cryo-electron microcopy using icosahedral symmetry of individual virions. Although the genomic core of RVFV MP-12 is apparently poorly ordered, the glycoproteins on the virus surface are highly symmetric and arranged on a T = 12 icosahedral lattice. Our RVFV MP-12 structure allowed clear identification of inter-capsomer contacts and definition of possible glycoprotein arrangements within capsomers. This structure provides a detailed model for phleboviruses, opens new avenues for high-resolution structural studies of the bunyavirus family, and aids the design of antiviral diagnostics and effective subunit vaccines.

  13. Reassortment and distinct evolutionary dynamics of Rift Valley Fever virus genomic segments

    PubMed Central

    Freire, Caio C. M.; Iamarino, Atila; Soumaré, Peinda O. Ly; Faye, Ousmane; Sall, Amadou A.; Zanotto, Paolo M. A.

    2015-01-01

    Rift Valley Fever virus (RVFV) is a member of Bunyaviridae family that causes a febrile disease affecting mainly ruminants and occasionally humans in Africa, with symptoms that range from mid to severe. RVFV has a tri-segmented ssRNA genome that permits reassortment and could generate more virulent strains. In this study, we reveal the importance of reassortment for RVFV evolution using viral gene genealogy inference and phylodynamics. We uncovered seven events of reassortment that originated RVFV lineages with discordant origins among segments. Moreover, we also found that despite similar selection regimens, the three segments have distinct evolutionary dynamics; the longer segment L evolves at a significant lower rate. Episodes of discordance between population size estimates per segment also coincided with reassortment dating. Our results show that RVFV segments are decoupled enough to have distinct demographic histories and to evolve under different molecular rates. PMID:26100494

  14. Serological tests for detecting Rift Valley fever viral antibodies in sheep from the Nile Delta.

    PubMed Central

    Scott, R M; Feinsod, F M; Allam, I H; Ksiazek, T G; Peters, C J; Botros, B A; Darwish, M A

    1986-01-01

    To determine the accuracy of serological methods in detecting Rift Valley fever (RVF) viral antibodies, we examined serum samples obtained from 418 sheep in the Nile Delta by using five tests. The plaque reduction neutralization test (PRNT) was considered the standard serological method against which the four other tests were compared. Twenty-four serum samples had RVF viral antibodies detected by PRNT. Hemagglutination inhibition and enzyme-linked immunosorbent assay antibodies to RVF virus were also present in the same 24 serum samples. Indirect immunofluorescence was less sensitive in comparison with PRNT, and complement fixation was the least sensitive. These results extend observations made with laboratory animals to a large field-collected group of Egyptian sheep. PMID:3533977

  15. Modelling Rift Valley fever (RVF) disease vector habitats using active and passive remote sensing systems

    NASA Technical Reports Server (NTRS)

    Ambrosia, Vincent G.; Linthicum, K. G.; Bailey, C. L.; Sebesta, P.

    1989-01-01

    The NASA Ames Ecosystem Science and Technology Branch and the U.S. Army Medical Research Institute of Infectious Diseases are conducting research to detect Rift Valley fever (RVF) vector habitats in eastern Africa using active and passive remote-sensing. The normalized difference vegetation index (NDVI) calculated from Landsat TM and SPOT data is used to characterize the vegetation common to the Aedes mosquito. Relationships have been found between the highest NDVI and the 'dambo' habitat areas near Riuru, Kenya on both wet and dry data. High NDVI values, when combined with the vegetation classifications, are clearly related to the areas of vector habitats. SAR data have been proposed for use during the rainy season when optical systems are of minimal use and the short frequency and duration of the optimum RVF mosquito habitat conditions necessitate rapid evaluation of the vegetation/moisture conditions; only then can disease potential be stemmed and eradication efforts initiated.

  16. A Review of Mosquitoes Associated with Rift Valley Fever Virus in Madagascar

    PubMed Central

    Tantely, Luciano M.; Boyer, Sébastien; Fontenille, Didier

    2015-01-01

    Rift Valley fever (RVF) is a viral zoonotic disease occurring throughout Africa, the Arabian Peninsula, and Madagascar. The disease is caused by a Phlebovirus (RVF virus [RVFV]) transmitted to vertebrate hosts through the bite of infected mosquitoes. In Madagascar, the first RVFV circulation was reported in 1979 based on detection in mosquitoes but without epidemic episode. Subsequently, two outbreaks occurred: the first along the east coast and in the central highlands in 1990 and 1991 and the most recent along the northern and eastern coasts and in the central highlands in 2008 and 2009. Despite the presence of 24 mosquitoes species potentially associated with RVFV transmission in Madagascar, little associated entomological information is available. In this review, we list the RVFV vector, Culex antennatus, as well as other taxa as candidate vector species. We discuss risk factors from an entomological perspective for the re-emergence of RVF in Madagascar. PMID:25732680

  17. Repurposing FDA-approved drugs as therapeutics to treat Rift Valley fever virus infection

    PubMed Central

    Benedict, Ashwini; Bansal, Neha; Senina, Svetlana; Hooper, Idris; Lundberg, Lindsay; de la Fuente, Cynthia; Narayanan, Aarthi; Gutting, Bradford; Kehn-Hall, Kylene

    2015-01-01

    There are currently no FDA-approved therapeutics available to treat Rift Valley fever virus (RVFV) infection. In an effort to repurpose drugs for RVFV treatment, a library of FDA-approved drugs was screened to determine their ability to inhibit RVFV. Several drugs from varying compound classes, including inhibitors of growth factor receptors, microtubule assembly/disassembly, and DNA synthesis, were found to reduce RVFV replication. The hepatocellular and renal cell carcinoma drug, sorafenib, was the most effective inhibitor, being non-toxic and demonstrating inhibition of RVFV in a cell-type and virus strain independent manner. Mechanism of action studies indicated that sorafenib targets at least two stages in the virus infectious cycle, RNA synthesis and viral egress. Computational modeling studies also support this conclusion. siRNA knockdown of Raf proteins indicated that non-classical targets of sorafenib are likely important for the replication of RVFV. PMID:26217313

  18. Reassortment and distinct evolutionary dynamics of Rift Valley Fever virus genomic segments.

    PubMed

    Freire, Caio C M; Iamarino, Atila; Soumaré, Peinda O Ly; Faye, Ousmane; Sall, Amadou A; Zanotto, Paolo M A

    2015-01-01

    Rift Valley Fever virus (RVFV) is a member of Bunyaviridae family that causes a febrile disease affecting mainly ruminants and occasionally humans in Africa, with symptoms that range from mid to severe. RVFV has a tri-segmented ssRNA genome that permits reassortment and could generate more virulent strains. In this study, we reveal the importance of reassortment for RVFV evolution using viral gene genealogy inference and phylodynamics. We uncovered seven events of reassortment that originated RVFV lineages with discordant origins among segments. Moreover, we also found that despite similar selection regimens, the three segments have distinct evolutionary dynamics; the longer segment L evolves at a significant lower rate. Episodes of discordance between population size estimates per segment also coincided with reassortment dating. Our results show that RVFV segments are decoupled enough to have distinct demographic histories and to evolve under different molecular rates. PMID:26100494

  19. Ultrastructural study of Rift Valley fever virus in the mouse model

    SciTech Connect

    Reed, Christopher; Steele, Keith E.; Honko, Anna; Shamblin, Joshua; Hensley, Lisa E.; Smith, Darci R.

    2012-09-15

    Detailed ultrastructural studies of Rift Valley fever virus (RVFV) in the mouse model are needed to develop and characterize a small animal model of RVF for the evaluation of potential vaccines and therapeutics. In this study, the ultrastructural features of RVFV infection in the mouse model were analyzed. The main changes in the liver included the presence of viral particles in hepatocytes and hepatic stem cells accompanied by hepatocyte apoptosis. However, viral particles were observed rarely in the liver; in contrast, particles were extremely abundant in the CNS. Despite extensive lymphocytolysis, direct evidence of viral replication was not observed in the lymphoid tissue. These results correlate with the acute-onset hepatitis and delayed-onset encephalitis that are dominant features of severe human RVF, but suggest that host immune-mediated mechanisms contribute significantly to pathology. The results of this study expand our knowledge of RVFV-host interactions and further characterize the mouse model of RVF.

  20. Distribution of Upper Pliocene brines in the northern Jordan Rift Valley, Israel and Jordan

    NASA Astrophysics Data System (ADS)

    Siebert, Christian; Möller, Peter; Rosenthal, Eliyahu; Guttman, Joseph; Yellin-Dror, Annat; Inbar, Nimrod; Magri, Fabien

    2014-05-01

    In the triangle of Lake Tiberias (LT), Yarmouk Gorge and Lower Jordan Valley (Fig. 1), fresh groundwaters are frequently deteriorated by variable admixture of ascending subsurface Upper-Pliocene brines. Element ratios and water isotopes reveal, that common source brine is present and is modified by water rock interaction and dilution with freshwater. This common source brine is inferred from the composition of the known Ha'on well brine being characterized by molar ratios of Na/Cl=0.53, 1000Br/Cl=5.5 and Ca/Mg=0.39 (Möller et al., 2011). The low Ca/Mg, a ratio also found for Newe Ur, is unique in an environment in which ratios >1 dominate because of omnipresent dolomitization of abundant limestones. Interaction with abundant intrusive basaltic bodies would add sodium and hence increase the low Na/Cl ratio to >1. Uptake of halite increases Na/Cl but decreases Br/Cl ratios. These ratios resemble seawater after 37-fold enrichment in Li molality by evaporation (McCaffrey et al. 1987). Although being diluted by freshwater the Ha'on well brine proves the presence of an evaporated seawater mother brine residing at unknown depth. The derivatives of inferred Ha'on mother brine are present around Lake Tiberias, in the lower Yarmouk Valley and in the northern Rift Valley at least as far southwards as Newe Ur. Areas of structural weakness, where the major fault systems occur, are the main distribution areas for these brines. The study provides an example whereby hydrochemical analyses are applied as key tool to better understand deep fluid transport processes at basin-scale, which are supported by numerical modeling of groundwater flow. Möller P., Siebert C., Geyer S., Inbar N., Rosenthal E., Flexer A., Zilberbrand M. (2011): Relationship of brines in the Kinnarot Basin, Jordan-Dead Sea Rift Valley. Geofluids 12(2): 166-181. McCaffrey M.A., Lazar B., Holland H.D. (1987): The evaporation path of seawater and the coprecipitation of Br- and K+ with halite. J. Sediment. Petrol

  1. Analogies Between the East African Rift Around the Tanzania Craton and the Southwest Indian Ridge

    NASA Astrophysics Data System (ADS)

    Montesi, L. G.

    2013-12-01

    Continental rifts and oceanic spreading centers both accommodate plate divergence but their morphologies are often quite different. Yet, ultraslow spreading centers, especially the Southwest Indian ridge at the 9 to 16°E area (SWIR), present good analogies for the East African Rift (EAR), including localized volcanism, avolcanic segments, and a continuous but not straight rift axis. The archetypal oceanic spreading center features transform offsets. Volcanism is continuous along the ridge axis and is most vigorous at the center of spreading segments. By contrast, continental rifts do not feature transform offsets. The orientation of the rift can change along strike. Several rift segments are purely tectonic, with relatively isolated volcanic centers. The EAR around the Tanzania Craton clearly shows this kind of morphology. Ultraslow spreading centers share many of these features. The SWIR, in particular, displays dramatic changes in orientation, with volcanism localized at the junction between segments of different obliquity. Melt production and transport are controlled by the effective spreading rate, a combination of plate divergence velocity and rift obliquity. Ultraslow spreading center all have an effective spreading rate less than 13 mm/yr. At that speed the thickness of the thermal boundary layer is similar to the depth from which magma can be effectively extracted, opening the possibility for long-distance transport of magma along axis without extraction. Volcanic centers correspond to the location where the magma transport system first encounters a tectonically damaged zone that enables extraction to the surface. The effective velocity of the EAR in the Kenya dome is less than 4mm/yr firmly on par with ultraslow ridges. In fact, to generate magma by mantle upwelling at such a slow opening rate requires a higher mantle temperature or fertility than in the oceanic domain. Both opening rate and effective velocity increase northward along the Eastern branch

  2. Experimental Infection of Calves by Two Genetically-Distinct Strains of Rift Valley Fever Virus.

    PubMed

    Wilson, William C; Davis, A Sally; Gaudreault, Natasha N; Faburay, Bonto; Trujillo, Jessie D; Shivanna, Vinay; Sunwoo, Sun Young; Balogh, Aaron; Endalew, Abaineh; Ma, Wenjun; Drolet, Barbara S; Ruder, Mark G; Morozov, Igor; McVey, D Scott; Richt, Juergen A

    2016-01-01

    Recent outbreaks of Rift Valley fever in ruminant livestock, characterized by mass abortion and high mortality rates in neonates, have raised international interest in improving vaccine control strategies. Previously, we developed a reliable challenge model for sheep that improves the evaluation of existing and novel vaccines in sheep. This sheep model demonstrated differences in the pathogenesis of Rift Valley fever virus (RVFV) infection between two genetically-distinct wild-type strains of the virus, Saudi Arabia 2001 (SA01) and Kenya 2006 (Ken06). Here, we evaluated the pathogenicity of these two RVFV strains in mixed breed beef calves. There was a transient increase in rectal temperatures with both virus strains, but this clinical sign was less consistent than previously reported with sheep. Three of the five Ken06-infected animals had an early-onset viremia, one day post-infection (dpi), with viremia lasting at least three days. The same number of SA01-infected animals developed viremia at 2 dpi, but it only persisted through 3 dpi in one animal. The average virus titer for the SA01-infected calves was 1.6 logs less than for the Ken06-infected calves. Calves, inoculated with either strain, seroconverted by 5 dpi and showed time-dependent increases in their virus-neutralizing antibody titers. Consistent with the results obtained in the previous sheep study, elevated liver enzyme levels, more severe liver pathology and higher virus titers occurred with the Ken06 strain as compared to the SA01 strain. These results demonstrate the establishment of a virulent challenge model for vaccine evaluation in calves. PMID:27223298

  3. Broad Spectrum Antiviral Activity of Favipiravir (T-705): Protection from Highly Lethal Inhalational Rift Valley Fever

    PubMed Central

    Caroline, Amy L.; Powell, Diana S.; Bethel, Laura M.; Oury, Tim D.; Reed, Douglas S.; Hartman, Amy L.

    2014-01-01

    Background Development of antiviral drugs that have broad-spectrum activity against a number of viral infections would be of significant benefit. Due to the evolution of resistance to currently licensed antiviral drugs, development of novel anti-influenza drugs is in progress, including Favipiravir (T-705), which is currently in human clinical trials. T-705 displays broad-spectrum in vitro activity against a number of viruses, including Rift Valley Fever virus (RVFV). RVF is an important neglected tropical disease that causes human, agricultural, and economic losses in endemic regions. RVF has the capacity to emerge in new locations and also presents a potential bioterrorism threat. In the current study, the in vivo efficacy of T-705 was evaluated in Wistar-Furth rats infected with the virulent ZH501 strain of RVFV by the aerosol route. Methodology/Principal Findings Wistar-Furth rats are highly susceptible to a rapidly lethal disease after parenteral or inhalational exposure to the pathogenic ZH501 strain of RVFV. In the current study, two experiments were performed: a dose-determination study and a delayed-treatment study. In both experiments, all untreated control rats succumbed to disease. Out of 72 total rats infected with RVFV and treated with T-705, only 6 succumbed to disease. The remaining 66 rats (92%) survived lethal infection with no significant weight loss or fever. The 6 treated rats that succumbed survived significantly longer before succumbing to encephalitic disease. Conclusions/Significance Currently, there are no licensed antiviral drugs for treating RVF. Here, T-705 showed remarkable efficacy in a highly lethal rat model of Rift Valley Fever, even when given up to 48 hours post-infection. This is the first study to show protection of rats infected with the pathogenic ZH501 strain of RVFV. Our data suggest that T-705 has potential to be a broad-spectrum antiviral drug. PMID:24722586

  4. Rift Valley Fever Risk Map Model and Seroprevalence in Selected Wild Ungulates and Camels from Kenya

    NASA Technical Reports Server (NTRS)

    Britch, Seth C.; Binepal, Yatinder S.; Ruder, Mark G.; Kariithi, Henry M.; Linthicum, Kenneth J.; Anyamba, Assaf; Small, Jennifer L.; Tucker, Compton J.; Ateya, Leonard O.; Oriko, Abuu A.; Gacheru, Stephen; Wilson, William C.

    2013-01-01

    Since the first isolation of Rift Valley fever virus (RVFV) in the 1930s, there have been multiple epizootics and epidemics in animals and humans in sub-Saharan Africa. Prospective climate-based models have recently been developed that flag areas at risk of RVFV transmission in endemic regions based on key environmental indicators that precede Rift Valley fever (RVF) epizootics and epidemics. Although the timing and locations of human case data from the 2006-2007 RVF outbreak in Kenya have been compared to risk zones flagged by the model, seroprevalence of RVF antibodies in wildlife has not yet been analyzed in light of temporal and spatial predictions of RVF activity. Primarily wild ungulate serum samples from periods before, during, and after the 2006-2007 RVF epizootic were analyzed for the presence of RVFV IgM and/or IgG antibody. Results show an increase in RVF seropositivity from samples collected in 2007 (31.8%), compared to antibody prevalence observed from 2000-2006 (3.3%). After the epizootic, average RVF seropositivity diminished to 5% in samples collected from 2008-2009. Overlaying maps of modeled RVF risk assessments with sampling locations indicated positive RVF serology in several species of wild ungulate in or near areas flagged as being at risk for RVF. Our results establish the need to continue and expand sero-surveillance of wildlife species Kenya and elsewhere in the Horn of Africa to further calibrate and improve the RVF risk model, and better understand the dynamics of RVFV transmission.

  5. Experimental Infection of Calves by Two Genetically-Distinct Strains of Rift Valley Fever Virus

    PubMed Central

    Wilson, William C.; Davis, A. Sally; Gaudreault, Natasha N.; Faburay, Bonto; Trujillo, Jessie D.; Shivanna, Vinay; Sunwoo, Sun Young; Balogh, Aaron; Endalew, Abaineh; Ma, Wenjun; Drolet, Barbara S.; Ruder, Mark G.; Morozov, Igor; McVey, D. Scott; Richt, Juergen A.

    2016-01-01

    Recent outbreaks of Rift Valley fever in ruminant livestock, characterized by mass abortion and high mortality rates in neonates, have raised international interest in improving vaccine control strategies. Previously, we developed a reliable challenge model for sheep that improves the evaluation of existing and novel vaccines in sheep. This sheep model demonstrated differences in the pathogenesis of Rift Valley fever virus (RVFV) infection between two genetically-distinct wild-type strains of the virus, Saudi Arabia 2001 (SA01) and Kenya 2006 (Ken06). Here, we evaluated the pathogenicity of these two RVFV strains in mixed breed beef calves. There was a transient increase in rectal temperatures with both virus strains, but this clinical sign was less consistent than previously reported with sheep. Three of the five Ken06-infected animals had an early-onset viremia, one day post-infection (dpi), with viremia lasting at least three days. The same number of SA01-infected animals developed viremia at 2 dpi, but it only persisted through 3 dpi in one animal. The average virus titer for the SA01-infected calves was 1.6 logs less than for the Ken06-infected calves. Calves, inoculated with either strain, seroconverted by 5 dpi and showed time-dependent increases in their virus-neutralizing antibody titers. Consistent with the results obtained in the previous sheep study, elevated liver enzyme levels, more severe liver pathology and higher virus titers occurred with the Ken06 strain as compared to the SA01 strain. These results demonstrate the establishment of a virulent challenge model for vaccine evaluation in calves. PMID:27223298

  6. Searching for evidence of changes in extreme rainfall indices in the Central Rift Valley of Ethiopia

    NASA Astrophysics Data System (ADS)

    Muluneh, Alemayehu; Bewket, Woldeamlak; Keesstra, Saskia; Stroosnijder, Leo

    2016-02-01

    Extreme rainfall events have serious implications for economic sectors with a close link to climate such as agriculture and food security. This holds true in the Central Rift Valley (CRV) of Ethiopia where communities rely on highly climate-sensitive rainfed subsistence farming for livelihoods. This study investigates changes in ten extreme rainfall indices over a period of 40 years (1970-2009) using 14 meteorological stations located in the CRV. The CRV consists of three landscape units: the valley floor, the escarpments, and the highlands all of which are considered in our data analysis. The Belg (March-May) and Kiremt (June-September) seasons are also considered in the analysis. The Mann-Kendall test was used to detect trends of the rainfall indices. The results indicated that at the annual time scale, more than half (57 %) of the stations showed significant trends in total wet-day precipitation (PRCPTOT) and heavy precipitation days (R10mm). Only 7-35 % of stations showed significant trends, for the other rainfall indices. Spatially, the valley floor received increasing annual rainfall while the escarpments and the highlands received decreasing annual rainfall over the last 40 years. During Belg, 50 % of the stations showed significant increases in the maximum number of consecutive dry days (CDD) in all parts of the CRV. However, most other rainfall indices during Belg showed no significant changes. During Kiremt, considering both significant and non-significant trends, almost all rainfall indices showed an increasing trend in the valley floor and a decreasing trend in the escarpment and highlands. During Belg and Kiremt, the CDD generally showed increasing tendency in the CRV.

  7. Pore water chemistry of an alkaline rift valley lake: Lake Turkana, Kenya

    SciTech Connect

    Cerling, T.E.; Johnson, T.C.; Halfman, J.D.; Lister, G.

    1985-01-01

    Lake Turkana is the largest closed basin lake in the African rift system. It has evolved through the past 5000 years to become a moderately alkaline lake. Previous mass balance argument suggest that sulfate is removed from the lake by sulfate reduction in the sediments, and that the lake is accumulating in chloride, sodium, and alkalinity. Studies of pore water from 12 meter cores collected in November 1984 show that sulfate is reduced in the sediment column with a net production of alkalinity. Some sodium is lost from the lake and diffuses into the sediment to maintain charge balance. At several meters depth, organic matter is destroyed by methanogenic bacteria, as shown by the high delta /sup 13/C values for dissolved inorganic carbon. Magnesium and calcium molar ratios change with depth; chloride, sodium, and alkalinity also change with depth.

  8. The evolving contribution of border faults and intra-rift faults in early-stage East African rifts: insights from the Natron (Tanzania) and Magadi (Kenya) basins

    NASA Astrophysics Data System (ADS)

    Muirhead, J.; Kattenhorn, S. A.; Dindi, E.; Gama, R.

    2013-12-01

    In the early stages of continental rifting, East African Rift (EAR) basins are conventionally depicted as asymmetric basins bounded on one side by a ~100 km-long border fault. As rifting progresses, strain concentrates into the rift center, producing intra-rift faults. The timing and nature of the transition from border fault to intra-rift-dominated strain accommodation is unclear. Our study focuses on this transitional phase of continental rifting by exploring the spatial and temporal evolution of faulting in the Natron (border fault initiation at ~3 Ma) and Magadi (~7 Ma) basins of northern Tanzania and southern Kenya, respectively. We compare the morphologies and activity histories of faults in each basin using field observations and remote sensing in order to address the relative contributions of border faults and intra-rift faults to crustal strain accommodation as rifting progresses. The ~500 m-high border fault along the western margin of the Natron basin is steep compared to many border faults in the eastern branch of the EAR, indicating limited scarp degradation by mass wasting. Locally, the escarpment shows open fissures and young scarps 10s of meters high and a few kilometers long, implying ongoing border fault activity in this young rift. However, intra-rift faults within ~1 Ma lavas are greatly eroded and fresh scarps are typically absent, implying long recurrence intervals between slip events. Rift-normal topographic profiles across the Natron basin show the lowest elevations in the lake-filled basin adjacent to the border fault, where a number of hydrothermal springs along the border fault system expel water into the lake. In contrast to Natron, a ~1600 m high, densely vegetated, border fault escarpment along the western edge of the Magadi basin is highly degraded; we were unable to identify evidence of recent rupturing. Rift-normal elevation profiles indicate the focus of strain has migrated away from the border fault into the rift center, where

  9. What the volcanism of the East African Rift tells us on its evolution and dynamics: a reappraisal

    NASA Astrophysics Data System (ADS)

    Michon, Laurent

    2015-04-01

    The East African Rift (EAR) is one of the most studied tectonic structures on Earth. Classically, it is described as extending from Afar in the North to the Malawi rift in the South, along the eastern and western branches, respectively. A widely accepted consensus also exists on two main points: 1- the rift initiated first with plume emplacement below the northern part of the eastern branch and 2- extension and volcanism subsequently migrated southward along the western branch (e.g., Ebinger, 1989). However, an increasing amount of new geochronological data on the volcanic activity in the southern part of the East African Rift tends to weaken these interpretations and imposes a reassessment of the rift dynamics. The volcanic activity being one of the main characteristics of this rift, I use it here to determine the lateral extension of the rift system and to assess the rift activity through times. First, the volcanism unambiguously indicates that the rift is not limited to the African continent but can be traced in the Mozambique Channel and in Madagascar where it is closely related to active tectonics (graben and transfer faults) initiated since at least the Miocene. Moreover, the synthesis of more than 800 published geochronological data of volcanic products distributed over the overal East African Rift allows the distinction of two parts. The first part, the Northern EAR, corresponds to the sole eastern branch, which is characterized by volcanic plateaus resulting from huge magma flux during three main periods (32-28, 18-12, 6-0 Ma). Provinces of the second part, the Southern EAR (the western branch, the Mozambique Channel and Madagascar), share rift-related scattered volcanic centres characterized by coeval periods of activity since the Oligocene (28-24, 20-16 and 12-0 Ma). This synthesis highlights the lack of southward migration of the volcanism during the evolution of the East African Rift and instead reveals the almost synchronous development of the

  10. Sismotectonics in the western branch of the East African Rift System

    NASA Astrophysics Data System (ADS)

    Delvaux, Damien; Kervyn, François; Mulumba, Jean-Luc; Kipata, Louis; Sebagenzi, Stanislas; Mavonga, Georges; Macheyeki, Athanas; Temu, Elly Bryan

    2013-04-01

    The western branch of the East African rift system is known of its particular seismic activity with larger magnitude (up to Ms 7.3) and more frequent destructive earthquakes than in the eastern branch. As a contribution to the IGCP 601 project Seismotectonic Map of Africa, we compiled the known active faults, thermal springs and historical seismicity in Central Africa. Using the rich archives of the Royal Museum for Central Africa, publications and own field observations, we present a compilation of available data relative to the current seismotectonic activity along the western branch of the East African rift system, in DRC, Rwanda, Burundi and Tanzania. Neotectonic activity related to the western rift branch is in general well expressed and relatively well studied in the eastern flank of this rift branch, in Uganda, Rwanda, Burundi and Tanzania. In contrast, the western flank of this rift branch, largely exposed in the DRC, has attracted less attention. However, data collected during the colonial times show significant sismotectonic activity in East DRC, not only in the western flank of the western rift branch, but extending far westwards up to the margin of the Congo basin. In particular, our predecessors paid a special attention to the mapping and description of thermal springs, noticing that they are often controlled by active faults. In addition, the operators of the relatively dense network of meteorological stations installed in the DRC, Rwanda and Burundi also recorded were with variable level of completeness and detail the earthquakes that they could felt. This provides a rich database that is used to complete the existing knowledge on historical seismicity. An important effort has still to be paid to identify and map potentially active fault due to poor field accessibility, tropical climate weathering and vegetation coverage. The main problem in the compilation of active fault data is that very few of them have been investigated by paleoseismic trenching

  11. Evaluating spatial and temporal variations of rainfall erosivity, case of Central Rift Valley of Ethiopia

    NASA Astrophysics Data System (ADS)

    Meshesha, Derege Tsegaye; Tsunekawa, Atsushi; Tsubo, Mitsuru; Haregeweyn, Nigussie; Adgo, Enyew

    2015-02-01

    Land degradation in many Ethiopian highlands occurs mainly due to high rainfall erosivity and poor soil conservation practices. Rainfall erosivity is an indicator of the precipitation energy and ability to cause soil erosion. In Central Rift Valley (CRV) of Ethiopia, where the climate is characterized as arid and semiarid, rainfall is the main driver of soil erosion that in turn causes a serious expansion in land degradation. In order to evaluate the spatial and temporal variability of rainfall erosivity and its impact on soil erosion, long-term rainfall data (1980-2010) was used, and the monthly Fournier index (FI) and the annual modified Fournier index (MFI) were applied. Student's t test analysis was performed particularly to examine statistical significances of differences in average monthly and annual erosivity values. The result indicated that, in a similar spatial pattern with elevation and rainfall amount, average annual erosivity is also found being higher in western highlands of the valley and gradually decreased towards the east. The long-term average annual erosivity (MFI) showed a general decreasing trend in recent 10 years (2000-2010) as compared to previous 20 years (1980-1999). In most of the stations, average erosivity of main rainy months (May, June, July, and August) showed a decreasing trend, whereby some of them (about 33.3 %) are statically significant at 90 and 95 % confidence intervals but with high variation in spatial pattern of changes. The overall result of the study showed that rainfall aggression (erosivity) in the region has a general decreasing trend in the recent decade as compared to previous decades, especially in the western highlands of the valley. Hence, it implies that anthropogenic factors such as land use change being coupled with topography (steep slope) have largely contributed to increased soil erosion rate in the region.

  12. First External Quality Assessment of Molecular and Serological Detection of Rift Valley Fever in the Western Mediterranean Region

    PubMed Central

    Monaco, Federica; Cosseddu, Gian Mario; Doumbia, Baba; Madani, Hafsa; El Mellouli, Fatiha; Jiménez-Clavero, Miguel Angel; Sghaier, Soufien; Marianneau, Philippe; Cetre-Sossah, Catherine; Polci, Andrea; Lacote, Sandra; Lakhdar, Magtouf; Fernandez-Pinero, Jovita; Sari Nassim, Chabane; Pinoni, Chiara; Capobianco Dondona, Andrea; Gallardo, Carmina; Bouzid, Taoufiq; Conte, Annamaria; Bortone, Grazia; Savini, Giovanni; Petrini, Antonio; Puech, Lilian

    2015-01-01

    Rift Valley fever (RVF) is a mosquito-borne viral zoonosis which affects humans and a wide range of domestic and wild ruminants. The large spread of RVF in Africa and its potential to emerge beyond its geographic range requires the development of surveillance strategies to promptly detect the disease outbreaks in order to implement efficient control measures, which could prevent the widespread of the virus to humans. The Animal Health Mediterranean Network (REMESA) linking some Northern African countries as Algeria, Egypt, Libya, Mauritania, Morocco, Tunisia with Southern European ones as France, Italy, Portugal and Spain aims at improving the animal health in the Western Mediterranean Region since 2009. In this context, a first assessment of the diagnostic capacities of the laboratories involved in the RVF surveillance was performed. The first proficiency testing (external quality assessment—EQA) for the detection of the viral genome and antibodies of RVF virus (RVFV) was carried out from October 2013 to February 2014. Ten laboratories participated from 6 different countries (4 from North Africa and 2 from Europe). Six laboratories participated in the ring trial for both viral RNA and antibodies detection methods, while four laboratories participated exclusively in the antibodies detection ring trial. For the EQA targeting the viral RNA detection methods 5 out of 6 laboratories reported 100% of correct results. One laboratory misidentified 2 positive samples as negative and 3 positive samples as doubtful indicating a need for corrective actions. For the EQA targeting IgG and IgM antibodies methods 9 out of the 10 laboratories reported 100% of correct results, whilst one laboratory reported all correct results except one false-positive. These two ring trials provide evidence that most of the participating laboratories are capable to detect RVF antibodies and viral RNA thus recognizing RVF infection in affected ruminants with the diagnostic methods currently

  13. The Hominin Sites and Paleolakes Drilling Project: inferring the environmental context of human evolution from eastern African rift lake deposits

    NASA Astrophysics Data System (ADS)

    Cohen, A.; Campisano, C.; Arrowsmith, R.; Asrat, A.; Behrensmeyer, A. K.; Deino, A.; Feibel, C.; Hill, A.; Johnson, R.; Kingston, J.; Lamb, H.; Lowenstein, T.; Noren, A.; Olago, D.; Owen, R. B.; Potts, R.; Reed, K.; Renaut, R.; Schäbitz, F.; Tiercelin, J.-J.; Trauth, M. H.; Wynn, J.; Ivory, S.; Brady, K.; O'Grady, R.; Rodysill, J.; Githiri, J.; Russell, J.; Foerster, V.; Dommain, R.; Rucina, S.; Deocampo, D.; Russell, J.; Billingsley, A.; Beck, C.; Dorenbeck, G.; Dullo, L.; Feary, D.; Garello, D.; Gromig, R.; Johnson, T.; Junginger, A.; Karanja, M.; Kimburi, E.; Mbuthia, A.; McCartney, T.; McNulty, E.; Muiruri, V.; Nambiro, E.; Negash, E. W.; Njagi, D.; Wilson, J. N.; Rabideaux, N.; Raub, T.; Sier, M. J.; Smith, P.; Urban, J.; Warren, M.; Yadeta, M.; Yost, C.; Zinaye, B.

    2016-02-01

    The role that climate and environmental history may have played in influencing human evolution has been the focus of considerable interest and controversy among paleoanthropologists for decades. Prior attempts to understand the environmental history side of this equation have centered around the study of outcrop sediments and fossils adjacent to where fossil hominins (ancestors or close relatives of modern humans) are found, or from the study of deep sea drill cores. However, outcrop sediments are often highly weathered and thus are unsuitable for some types of paleoclimatic records, and deep sea core records come from long distances away from the actual fossil and stone tool remains. The Hominin Sites and Paleolakes Drilling Project (HSPDP) was developed to address these issues. The project has focused its efforts on the eastern African Rift Valley, where much of the evidence for early hominins has been recovered. We have collected about 2 km of sediment drill core from six basins in Kenya and Ethiopia, in lake deposits immediately adjacent to important fossil hominin and archaeological sites. Collectively these cores cover in time many of the key transitions and critical intervals in human evolutionary history over the last 4 Ma, such as the earliest stone tools, the origin of our own genus Homo, and the earliest anatomically modern Homo sapiens. Here we document the initial field, physical property, and core description results of the 2012-2014 HSPDP coring campaign.

  14. Permo-Triassic structural evolution of the Argana Valley, impact of the Atlantic rifting in the High Atlas, Morocco

    NASA Astrophysics Data System (ADS)

    Baudon, Catherine; Redfern, Jonathan; Van Den Driessche, Jean

    2012-04-01

    This paper provides an alternative model to explain the structural evolution of the Argana Valley, located in the Western High Atlas of Morocco. Most Triassic basins in the High Atlas have been described as isolated rift basins distributed along an ENE-WSW oriented trough and developed as a series of half-grabens. They are characterised by two main sets of syn-sedimentary faults striking ENE-WSW and NNE-SSW, generally attributed to the Atlantic and Tethys rifting. The Permo-Triassic sediments of the Argana Valley are offset by similar trending faults and, as such, they have been interpreted as typical infill sediments of narrow rift-basins in Morocco, controlled by syn-sedimentary faulting due to the Atlantic rifting. Our study investigates the structural evolution of the area using newly acquired field analysis of the main faults and unconformities. This data, together with published information, has been used to construct a series of structural cross-sections across the valley. Three main unconformities have been recognised. The first unconformity separates Permian sediments from the underlying deformed Palaeozoic rocks. The second is an angular unconformity between Late Permian sediments and the overlying Triassic sequence, attributed to relaxation and orogenic collapse that occurred after the Hercynian Orogeny. The geometry of Late Permian units suggests that the large E-W to ENE-WSW faults occurred after deposition of the Late Permian and before the Triassic, and were associated with a major phase of tectonic activity and associated erosion. The third angular unconformity occurs between the latest Triassic sediments and the overlying basalts or Jurassic sedimentary sequence. Significantly, this study suggests that the ENE-WSW faults and most of NNE faults were not active during sedimentation of the Triassic. We conclude that the Triassic sediments of the Argana Valley were not deposited in a half graben, but within a slowly subsiding domain, such as a sag

  15. Development of a diagnostic one-tube RT-PCR for the detection of Rift Valley fever virus.

    PubMed

    Espach, A; Romito, M; Nel, L H; Viljoen, G J

    2002-09-01

    Diagnosis of Rift Valley fever (RVF) is based on serology and virus isolation. The disadvantages of the former include poor sensitivity, high cost, risks associated with using infectious virus as antigen, the lengthy duration of ELISA as well as cross-reactivity with other Phleboviruses. We developed, optimised and evaluated a one-tube reverse-transcription-polymerase chain reaction (RT-PCR) for the detection of Rift Valley fever virus (RVFV) in ruminants. The PCR primers for this assay were designed to anneal to a region within the M segment of the virus genome, encoding glycoproteins G1 and G2. A PCR amplicon of 363 bp was obtained. The sensitivity of the assay was determined to be 0.25 TCID50. This test should allow for the early and rapid detection of RVFV in both serum and whole blood. In addition, it could facilitate the quantification of antigen for the manufacture of current vaccines. PMID:12356173

  16. Remote Sensing Contributions to Prediction and Risk Assessment of Natural Disasters Caused by Large Scale Rift Valley Fever Outbreaks

    NASA Technical Reports Server (NTRS)

    Anyamba, Assaf; Linthicum, Kenneth J.; Small, Jennifer; Britch, S. C.; Tucker, C. J.

    2012-01-01

    Remotely sensed vegetation measurements for the last 30 years combined with other climate data sets such as rainfall and sea surface temperatures have come to play an important role in the study of the ecology of arthropod-borne diseases. We show that epidemics and epizootics of previously unpredictable Rift Valley fever are directly influenced by large scale flooding associated with the El Ni o/Southern Oscillation. This flooding affects the ecology of disease transmitting arthropod vectors through vegetation development and other bioclimatic factors. This information is now utilized to monitor, model, and map areas of potential Rift Valley fever outbreaks and is used as an early warning system for risk reduction of outbreaks to human and animal health, trade, and associated economic impacts. The continuation of such satellite measurements is critical to anticipating, preventing, and managing disease epidemics and epizootics and other climate-related disasters.

  17. [Epidemiology of Rift Valley fever in western Africa. I. Serologic survey in domestic ruminants of Burkina Faso].

    PubMed

    Akakpo, A J; Some, M J; Bornarel, P; Jouan, A; Gonzalez, J P

    1989-01-01

    A serosurvey of Rift valley fever virus infection has been conducted among 2,410 domestic ruminants (sheep, goats and cattle) from Burkina Faso in 1985, 1986 and 1987. An active circulation of virus was demonstrated and 26.7% of the total animal tested had Rift valley fever virus reacting antibodies. An epizootic was demonstrated retrospectively for 1987 and appears to correspond to the RVF outbreak observed in the same type of sahelian environment during the same year in Mauritania. Analogous ecoclimatic and environmental risk factors are discussed. Others phleboviruses such as Arumowot, Gordil, Saint-Floris, Gabek Forest and Odrenisrou seem to be active in some areas but no evidence of pathogenesis for domestic ruminants was demonstrated. PMID:2766443

  18. Do melt-rich shear zones lubricate rift flanks? 3-D spatial gradients in anisotropy beneath the East African Rift in Ethiopia

    NASA Astrophysics Data System (ADS)

    Holtzman, B. K.; Gaherty, J. B.; Kendall, J.; Stuart, G.

    2006-12-01

    Melt-enhanced weakening of the mantle may be essential for a continent to break apart and rift. A primary means of understanding this aspect of the dynamics of rifting (and other geodynamic settings) is the interpretation of seismic anisotropy in terms of melt distribution and/or mantle flow direction. In recent rock- deformation experiments, the relationships between flow direction and seismic fast direction are complicated by the presence of water (e.g. Katayama et al., 2004) and segregated melt (Holtzman et al. 2003). In the latter, deviatoric stress drives melt to organize into networks of melt-rich shear zones. Scaling from laboratory to upper mantle conditions predicts characteristic network spacings of <1 km, less than wavelengths of measured seismic waves; thus they should cause significant seismic anisotropy. Measurable gradients in anisotropy may be diagnostic indicators of gradients in melt segregation. Because melt-rich shear zones will weaken the mantle on a large scale, the presence of such anisotropy gradients would map to gradients in viscosity. To map melt distribution beneath the rift and test for the presence or absence of this process, we combine measurements of seismic velocities beneath the East African Rift in Ethiopia with modeling of elastic properties of aligned, segregated melt and olivine fabric. Analysis of SKS phases has shown that fast directions parallel magmatic centers in the rift and splitting magnitudes are largest near the rift flanks, consistent with the hypothesis above (e.g. Kendall et al., 2006). Preliminary analysis of Love-Rayleigh differential times across the rift are consistent with a vertical fast axis, suggesting the presence of a vertically aligned, rift parallel melt phase down to the solidus (Pilidou et al., 2005). We expand on these results by applying a cross-correlation procedure to precisely estimate relative amplitude and phase of surface waves traversing the rift. Data are derived from the EAGLE and Ethiopia

  19. An observational study of the summer Mediterranean Sea breeze front penetration into the complex topography of the Jordan Rift Valley

    NASA Astrophysics Data System (ADS)

    Naor, R.; Potchter, O.; Shafir, H.; Alpert, P.

    2015-09-01

    The Mediterranean summer sea breeze front (SBF) climatic features of penetration into the complex topography of the Jordan Rift Valley (JRV) were investigated. It was shown that the SBF penetration into the JRV occurs in a well-defined chronological order from north to south. One exception to this general rule is the breeze penetration of Sdom, which occurs after it has penetrated the Arava which is located further south, probably due to the micro-climatic effect of the Dead Sea. It was also noted that the breeze increases the local specific humidity as it reaches the JRV in spite of significant temperature increases. The temperature reaches its daily peak 2 to 3 h later in the southern valley compared to the northern valley and is suggested to be due to the later SBF penetration and the valley structure. The pre-SBF line features in the JRV are described.

  20. Evolution of the East African rift: Drip magmatism, lithospheric thinning and mafic volcanism

    NASA Astrophysics Data System (ADS)

    Furman, Tanya; Nelson, Wendy R.; Elkins-Tanton, Linda T.

    2016-07-01

    The origin of the Ethiopian-Yemeni Oligocene flood basalt province is widely interpreted as representing mafic volcanism associated with the Afar mantle plume head, with minor contributions from the lithospheric mantle. We reinterpret the geochemical compositions of primitive Oligocene basalts and picrites as requiring a far more significant contribution from the metasomatized subcontinental lithospheric mantle than has been recognized previously. This region displays the fingerprints of mantle plume and lithospheric drip magmatism as predicted from numerical models. Metasomatized mantle lithosphere is not dynamically stable, and heating above the upwelling Afar plume caused metasomatized lithosphere with a significant pyroxenite component to drip into the asthenosphere and melt. This process generated the HT2 lavas observed today in restricted portions of Ethiopia and Yemen now separated by the Red Sea, suggesting a fundamental link between drip magmatism and the onset of rifting. Coeval HT1 and LT lavas, in contrast, were not generated by drip melting but instead originated from shallower, dominantly anhydrous peridotite. Looking more broadly across the East African Rift System in time and space, geochemical data support small volume volcanic events in Turkana (N. Kenya), Chyulu Hills (S. Kenya) and the Virunga province (Western Rift) to be derived ultimately from drip melting. The removal of the gravitationally unstable, metasomatized portion of the subcontinental lithospheric mantle via dripping is correlated in each case with periods of rapid uplift. The combined influence of thermo-mechanically thinned lithosphere and the Afar plume together thus controlled the locus of continental rift initiation between Africa and Arabia and provide dynamic support for the Ethiopian plateau.

  1. Roles of the Coding and Noncoding Regions of Rift Valley Fever Virus RNA Genome Segments in Viral RNA Packaging

    PubMed Central

    Murakami, Shin; Terasaki, Kaori; Narayanan, Krishna

    2012-01-01

    We characterized the RNA elements involved in the packaging of Rift Valley fever virus RNA genome segments, L, M, and S. The 5′-terminal 25 nucleotides of each RNA segment were equally competent for RNA packaging and carried an RNA packaging signal, which overlapped with the RNA replication signal. Only the deletion mutants of L RNA, but not full-length L RNA, were efficiently packaged, implying the possible requirement of RNA compaction for L RNA packaging. PMID:22278239

  2. Seroprevalence of Rift Valley fever virus in sheep and goats in Zambézia, Mozambique

    PubMed Central

    Blomström, Anne-Lie; Scharin, Isabelle; Stenberg, Hedvig; Figueiredo, Jaquline; Nhambirre, Ofélia; Abilio, Ana; Berg, Mikael; Fafetine, José

    2016-01-01

    Background The Rift Valley fever virus (RVFV) is a vector-borne virus that causes disease in ruminants, but it can also infect humans. In humans, the infection can be asymptomatic but can also lead to illness, ranging from a mild disease with fever, headache and muscle pain to a severe disease with encephalitis and haemorrhagic fever. In rare cases, death can occur. In infected animals, influenza-like symptoms can occur, and abortion and mortality in young animals are indicative of RVFV infection. Since the initial outbreak in Kenya in the 1930s, the virus has become endemic to most of sub-Saharan Africa. In 2000, the virus appeared in Yemen and Saudi Arabia; this was the first outbreak of RVF outside of Africa. Rift Valley fever epidemics are often connected to heavy rainfall, leading to an increased vector population and spread of the virus to animals and/or humans. However, the virus needs to be maintained during the inter-epidemic periods. In this study, we investigated the circulation of RVFV in small ruminants (goats and sheep) in Zambézia, Mozambique, an area with a close vector/wildlife/livestock/human interface. Materials and methods Between September and October 2013, 181 sheep and 187 goat blood samples were collected from eight localities in the central region of Zambézia, Mozambique. The samples were analysed for the presence of antibodies against RVFV using a commercial competitive ELISA. Results and discussion The overall seroprevalence was higher in sheep (44.2%) than goats (25.1%); however, there was a high variation in seroprevalence between different localities. The data indicate an increased seroprevalence for sheep compared to 2010, when a similar study was conducted in this region and in overlapping villages. No noticeable health problems in the herds were reported. Conclusions This study shows an inter-epidemic circulation of RVFV in small ruminants in Zambézia, Mozambique. Neither outbreaks of RVF nor typical clinical signs of RVFV have

  3. Postepidemic Analysis of Rift Valley Fever Virus Transmission in Northeastern Kenya: A Village Cohort Study

    PubMed Central

    LaBeaud, A. Desirée; Muiruri, Samuel; Sutherland, Laura J.; Dahir, Saidi; Gildengorin, Ginny; Morrill, John; Muchiri, Eric M.; Peters, Clarence J.; King, Charles H.

    2011-01-01

    Background In endemic areas, Rift Valley fever virus (RVFV) is a significant threat to both human and animal health. Goals of this study were to measure human anti-RVFV seroprevalence in a high-risk area following the 2006–2007 Kenyan Rift Valley Fever (RVF) epidemic, to identify risk factors for interval seroconversion, and to monitor individuals previously exposed to RVFV in order to document the persistence of their anti-RVFV antibodies. Methodology/Findings We conducted a village cohort study in Ijara District, Northeastern Province, Kenya. One hundred two individuals tested for RVFV exposure before the 2006–2007 RVF outbreak were restudied to determine interval anti-RVFV seroconversion and persistence of humoral immunity since 2006. Ninety-two additional subjects were enrolled from randomly selected households to help identify risk factors for current seropositivity. Overall, 44/194 or 23% (CI95%:17%–29%) of local residents were RVFV seropositive. 1/85 at-risk individuals restudied in the follow-up cohort had seroconverted since early 2006. 27/92 (29%, CI95%: 20%–39%) of newly tested individuals were seropositive. All 13 individuals with positive titers (by plaque reduction neutralization testing (PRNT80)) in 2006 remained positive in 2009. After adjustment in multivariable logistic models, age, village, and drinking raw milk were significantly associated with RVFV seropositivity. Visual impairment (defined as ≤20/80) was much more likely in the RVFV-seropositive group (P<0.0001). Conclusions Our results highlight significant variability in RVFV exposure in two neighboring villages having very similar climate, terrain, and insect density. Among those with previous exposure, RVFV titers remained at >1∶40 for more than 3 years. In concordance with previous studies, residents of the more rural village were more likely to be seropositive and RVFV seropositivity was associated with poor visual acuity. Raw milk consumption was strongly associated with

  4. A methodology to track temporal dynamics and rainfall thresholds of landslide processes in the East African Rift

    NASA Astrophysics Data System (ADS)

    Monsieurs, Elise; Jacobs, Liesbet; Kervyn, François; Kirschbaum, Dalia; d'Oreye, Nicolas; Derauw, Dominique; Kervyn, Matthieu; Nobile, Adriano; Trefois, Philippe; Dewitte, Olivier

    2015-04-01

    The East African rift valley is a major tectonic feature that shapes Central Africa and defines linear-shaped lowlands between highland ranges due to the action of geologic faults associated to earthquakes and volcanism. The region of interest, covering the Virunga Volcanic Province in eastern DRC, western Rwanda and Burundi, and southwest Uganda, is threatened by a rare combination of several types of geohazards, while it is also one of the most densely populated region of Africa. These geohazards can globally be classified as seismic, volcanic and landslide hazards. Landslides, include a wide range of ground movements, such as rock falls, deep failure of slopes and shallow debris flows. Landslides are possibly the most important geohazard in terms of recurring impact on the populations, causing fatalities every year and resulting in structural and functional damage to infrastructure and private properties, as well as serious disruptions of the organization of societies. Many landslides are observed each year in the whole region, and their occurrence is clearly linked to complex topographic, lithologic and vegetation signatures coupled with heavy rainfall events, which is the main triggering factor. The source mechanisms underlying landslide triggering and dynamics in the region of interest are still poorly understood, even though in recent years, some progress has been made towards appropriate data collection. Taking into account difficulties of field accessibility, we present a methodology to study landslide processes by multi-scale and multi-sensor remote sensing data from very high to low resolution (Pléiades, TRMM, CosmoSkyMed, Sentinel). The research will address the evolution over time of such data combined with other earth observations (seismic ground based networks, catalogues, rain gauge networks, GPS surveying, field observations) to detect and study landslide occurrence, dynamics and evolution. This research aims to get insights into the rainfall

  5. DoD-GEIS Rift Valley Fever Monitoring and Prediction System as a Tool for Defense and US Diplomacy

    NASA Technical Reports Server (NTRS)

    Anyamba, Assaf; Tucker, Compton J.; Linthicum, Kenneth J.; Witt, Clara J.; Gaydos, Joel C.; Russell, Kevin L.

    2011-01-01

    Over the last 10 years the Armed Forces Health Surveillance Center's Global Emerging Infections Surveillance and Response System (GEIS) partnering with NASA'S Goddard Space Flight Center and USDA's USDA-Center for Medical, Agricultural & Veterinary Entomology established and have operated the Rift Valley fever Monitoring and Prediction System to monitor, predict and assess the risk of Rift Valley fever outbreaks and other vector-borne diseases over Africa and the Middle East. This system is built on legacy DoD basic research conducted by Walter Reed Army Institute of Research overseas laboratory (US Army Medical Research Unit-Kenya) and the operational satellite environmental monitoring by NASA GSFC. Over the last 10 years of operation the system has predicted outbreaks of Rift Valley fever in the Horn of Africa, Sudan, South Africa and Mauritania. The ability to predict an outbreak several months before it occurs provides early warning to protect deployed forces, enhance public health in concerned countries and is a valuable tool use.d by the State Department in US Diplomacy. At the international level the system has been used by the Food and Agricultural Organization (FAD) and the World Health Organization (WHO) to support their monitoring, surveillance and response programs in the livestock sector and human health. This project is a successful testament of leveraging resources of different federal agencies to achieve objectives of force health protection, health and diplomacy.

  6. Structure of the active rift zone and margins of the northern Imperial Valley from Salton Seismic Imaging Project (SSIP) data

    NASA Astrophysics Data System (ADS)

    Livers, A.; Han, L.; Delph, J. R.; White-Gaynor, A. L.; Petit, R.; Hole, J. A.; Stock, J. M.; Fuis, G. S.

    2012-12-01

    First-arrival refraction data were used to create a seismic velocity model of the upper crust across the actively rifting northern Imperial Valley and its margins. The densely sampled seismic refraction data were acquired by the Salton Seismic Imaging Project (SSIP) , which is investigating rift processes in the northern-most rift segment of the Gulf of California extensional province and earthquake hazards at the southern end of the San Andreas Fault system. A 95-km long seismic line was acquired across the northern Imperial Valley, through the Salton Sea geothermal field, parallel to the five Salton Butte volcanoes and perpendicular to the Brawley Seismic Zone and major strike-slip faults. Nineteen explosive shots were recorded with 100 m seismometer spacing across the valley and with 300-500 m spacing into the adjacent ranges. First-arrival travel times were picked from shot gathers along this line and a seismic velocity model was produced using tomographic inversion. Sedimentary basement and seismic basement in the valley are interpreted to be sediment metamorphosed by the very high heat flow. The velocity model shows that this basement to the west of the Brawley Seismic Zone is at ~4-km depth. The basement shallows to ~2-km depth in the active geothermal field and Salton Buttes volcanic field which locally coincide with the Brawley Seismic Zone. At the eastern edge of the geothermal field, the basement drops off again to ~3.5-km depth. The eastern edge of the valley appears to be fault bounded by the along-strike extension of the Sand Hills Fault, an inactive strike-slip fault. The seismic velocities to the east of the fault correspond to metamorphic rock of the Chocolate Mountains, different from the metamorphosed basement in the valley. The western edge of the valley appears to be fault bounded by the active Superstition Hills Fault. To the west of the valley, >4-km deep valley basement extends to the active Superstition Hills Fault. Basement then shallows

  7. The role of signal transducer and activator of transcription 3 in Rift Valley fever virus infection.

    PubMed

    Pinkham, Chelsea; An, Soyeon; Lundberg, Lindsay; Bansal, Neha; Benedict, Ashwini; Narayanan, Aarthi; Kehn-Hall, Kylene

    2016-09-01

    Rift Valley fever (RVF) is a zoonotic disease that can cause severe illness in humans and livestock, triggering spontaneous abortion in almost 100% of pregnant ruminants. In this study, we demonstrate that signal transducer and activator of transcription 3 (STAT3) is phosphorylated on its conserved tyrosine residue (Y705) following RVFV infection. This phosphorylation was dependent on a major virulence factor, the viral nonstructural protein NSs. Loss of STAT3 had little effect on viral replication, but rather resulted in cells being more susceptible to RVFV-induced cell death. Phosphorylated STAT3 translocated to the nucleus, coinciding with inhibition of fos, jun, and nr4a2 gene expression, and the presence of STAT3 and NSs at the nr4a2 promoter. NSs was found predominantly in the cytoplasm of STAT3 null cells, indicating that STAT3 influences NSs nuclear localization. Collectively, these data demonstrate that STAT3 functions in a pro-survival capacity through modulation of NSs localization. PMID:27318793

  8. The transmission potential of Rift Valley fever virus among livestock in the Netherlands: a modelling study

    PubMed Central

    2013-01-01

    Abstracts Rift Valley fever virus (RVFV) is a zoonotic vector-borne infection and causes a potentially severe disease. Many mammals are susceptible to infection including important livestock species. Although currently confined to Africa and the near-East, this disease causes concern in countries in temperate climates where both hosts and potential vectors are present, such as the Netherlands. Currently, an assessment of the probability of an outbreak occurring in this country is missing. To evaluate the transmission potential of RVFV, a mathematical model was developed and used to determine the initial growth and the Floquet ratio, which are indicators of the probability of an outbreak and of persistence in a periodic changing environment caused by seasonality. We show that several areas of the Netherlands have a high transmission potential and risk of persistence of the infection. Counter-intuitively, these are the sparsely populated livestock areas, due to the high vector-host ratios in these areas. Culex pipiens s.l. is found to be the main driver of the spread and persistence, because it is by far the most abundant mosquito. Our investigation underscores the importance to determine the vector competence of this mosquito species for RVFV and its host preference. PMID:23876054

  9. Inflammatory Biomarkers Associated with Lethal Rift Valley Fever Encephalitis in the Lewis Rat Model

    PubMed Central

    Caroline, Amy L.; Kujawa, Michael R.; Oury, Tim D.; Reed, Douglas S.; Hartman, Amy L.

    2016-01-01

    Rift Valley fever (RVF) is an emerging viral disease that causes significant human and veterinary illness in Africa and the Arabian Peninsula. Encephalitis is one of the severe complications arising from RVF virus (RVFV) infection of people, and the pathogenesis of this form of RVF is completely unknown. We use a novel reproducible encephalitic disease model in rats to identify biomarkers of lethal infection. Lewis rats were infected with RVFV strain ZH501 by aerosol exposure, then sacrificed daily to determine the course of infection and evaluation of clinical, virological, and immunological parameters. Weight loss, fever, and clinical signs occurred during the last 1–2 days prior to death. Prior to onset of clinical indications of disease, rats displayed marked granulocytosis and thrombocytopenia. In addition, high levels of inflammatory chemokines (MCP-1, MCS-F, Gro/KC, RANTES, and IL-1β) were detected first in serum (3–5 dpi) followed by brain (5–7 dpi). The results of this study are consistent with clinical data from human RVF patients and validate Lewis rats as an appropriate small animal model for RVF encephalitis. The biomarkers we identified here will be useful in future studies evaluating the efficacy of novel vaccines and therapeutics. PMID:26779164

  10. REE partitioning between apatite and melt in a peralkaline volcanic suite, Kenya Rift Valley

    USGS Publications Warehouse

    Macdonald, R.; Baginski, B.; Belkin, H.E.; Dzierzanowski, P.; Jezak, L.

    2009-01-01

    Electron microprobe analyses are presented for fluorapatite phenocrysts from a benmoreite-peralkaline rhyolite volcanic suite from the Kenya Rift Valley. The rocks have previously been well characterized petrographically and their crystallization conditions are reasonably well known. The REE contents in the M site increase towards the rhyolites, with a maximum britholite component of ~35 mol.%. Chondrite-normalized REE patterns are rather flat between La and Sm and then decrease towards Yb. Sodium and Fe occupy up to 1% and 4%, respectively, of the M site. The major coupled substitution is REE3+ + Si4+ ??? Ca2+ + P5+. The substitution REE3+ + Na+ ??? 2Ca2+ has been of minor importance. The relatively large Fe contents were perhaps facilitated by the low fo2 conditions of crystallization. Zoning is ubiquitous and resulted from both fractional crystallization and magma mixing. Apatites in some rhyolites are relatively Y-depleted, perhaps reflecting crystallization from melts which had precipitated zircon. Mineral/glass (melt) ratios for two rhyolites are unusually high, with maxima at Sm (762, 1123). ?? 2008 The Mineralogical Society.

  11. Risk factors associated with Rift Valley fever epidemics in South Africa in 2008–11

    PubMed Central

    Métras, Raphaëlle; Jewell, Chris; Porphyre, Thibaud; Thompson, Peter N.; Pfeiffer, Dirk U.; Collins, Lisa M.; White, Richard G.

    2015-01-01

    Rift Valley fever (RVF) is a zoonotic and vector-borne disease, mainly present in Africa, which represents a threat to human health, animal health and production. South Africa has experienced three major RVF epidemics (1950–51, 1973–75 and 2008–11). Due to data scarcity, no previous study has quantified risk factors associated with RVF epidemics in animals in South Africa. Using the 2008–11 epidemic datasets, a retrospective longitudinal study was conducted to identify and quantify spatial and temporal environmental factors associated with RVF incidence. Cox regressions with a Besag model to account for the spatial effects were fitted to the data. Coefficients were estimated by Bayesian inference using integrated nested Laplace approximation. An increase in vegetation density was the most important risk factor until 2010. In 2010, increased temperature was the major risk factor. In 2011, after the large 2010 epidemic wave, these associations were reversed, potentially confounded by immunity in animals, probably resulting from earlier infection and vaccination. Both vegetation density and temperature should be considered together in the development of risk management strategies. However, the crucial need for improved access to data on population at risk, animal movements and vaccine use is highlighted to improve model predictions. PMID:25804974

  12. A Fusion-Inhibiting Peptide against Rift Valley Fever Virus Inhibits Multiple, Diverse Viruses

    PubMed Central

    Koehler, Jeffrey W.; Smith, Jeffrey M.; Ripoll, Daniel R.; Spik, Kristin W.; Taylor, Shannon L.; Badger, Catherine V.; Grant, Rebecca J.; Ogg, Monica M.; Wallqvist, Anders; Guttieri, Mary C.; Garry, Robert F.; Schmaljohn, Connie S.

    2013-01-01

    For enveloped viruses, fusion of the viral envelope with a cellular membrane is critical for a productive infection to occur. This fusion process is mediated by at least three classes of fusion proteins (Class I, II, and III) based on the protein sequence and structure. For Rift Valley fever virus (RVFV), the glycoprotein Gc (Class II fusion protein) mediates this fusion event following entry into the endocytic pathway, allowing the viral genome access to the cell cytoplasm. Here, we show that peptides analogous to the RVFV Gc stem region inhibited RVFV infectivity in cell culture by inhibiting the fusion process. Further, we show that infectivity can be inhibited for diverse, unrelated RNA viruses that have Class I (Ebola virus), Class II (Andes virus), or Class III (vesicular stomatitis virus) fusion proteins using this single peptide. Our findings are consistent with an inhibition mechanism similar to that proposed for stem peptide fusion inhibitors of dengue virus in which the RVFV inhibitory peptide first binds to both the virion and cell membranes, allowing it to traffic with the virus into the endocytic pathway. Upon acidification and rearrangement of Gc, the peptide is then able to specifically bind to Gc and prevent fusion of the viral and endocytic membranes, thus inhibiting viral infection. These results could provide novel insights into conserved features among the three classes of viral fusion proteins and offer direction for the future development of broadly active fusion inhibitors. PMID:24069485

  13. Organochlorine pesticides in bird species and their prey (fish) from the Ethiopian Rift Valley region, Ethiopia.

    PubMed

    Yohannes, Yared Beyene; Ikenaka, Yoshinori; Nakayama, Shouta M M; Ishizuka, Mayumi

    2014-09-01

    Organochlorine pesticides (OCPs) and stable isotopes were measured in muscle from 4 bird and 5 fish species from the Ethiopian Rift Valley region where DDT is used for malaria control and vast agricultural activities are carried out. We investigated the bioaccumulation of OCPs such as DDTs, HCHs, chlordanes, and heptachlors between the species, and examined the potential risk posed by these compounds for bird species. Significant differences in contaminant profiles and levels were observed within the species. Levels of total OCPs ranged from 3.7 to 148.7 μg/g lipid in bird and 0.04 to 10.9 μg/g lipid in fish species. DDTs were the predominant contaminant, and a positive relationship between δ(15)N and ΣDDT concentrations was found. The main DDT metabolite, p,p'-DDE was the most abundant and significantly greater concentrations in bird species (up to 138.5 μg/g lipid), which could have deleterious effects on survival and/or reproduction of birds. PMID:24907858

  14. Has Rift Valley fever virus evolved with increasing severity in human populations in East Africa?

    PubMed Central

    Baba, Marycelin; Masiga, Daniel K; Sang, Rosemary; Villinger, Jandouwe

    2016-01-01

    Rift Valley fever (RVF) outbreaks have occurred across eastern Africa from 1912 to 2010 approximately every 4–15 years, most of which have not been accompanied by significant epidemics in human populations. However, human epidemics during RVF outbreaks in eastern Africa have involved 478 deaths in 1998, 1107 reported cases with 350 deaths from 2006 to 2007 and 1174 cases with 241 deaths in 2008. We review the history of RVF outbreaks in eastern Africa to identify the epidemiological factors that could have influenced its increasing severity in humans. Diverse ecological factors influence outbreak frequency, whereas virus evolution has a greater impact on its virulence in hosts. Several factors could have influenced the lack of information on RVF in humans during earlier outbreaks, but the explosive nature of human RVF epidemics in recent years mirrors the evolutionary trend of the virus. Comparisons between isolates from different outbreaks have revealed an accumulation of genetic mutations and genomic reassortments that have diversified RVF virus genomes over several decades. The threat to humans posed by the diversified RVF virus strains increases the potential public health and socioeconomic impacts of future outbreaks. Understanding the shifting RVF epidemiology as determined by its evolution is key to developing new strategies for outbreak mitigation and prevention of future human RVF casualties. PMID:27329846

  15. HIV type 1 gag genetic diversity among antenatal clinic attendees in North Rift Valley, Kenya.

    PubMed

    Nyagaka, Benuel; Kiptoo, Michael K; Lihana, Raphael W; Khamadi, Samoel A; Makokha, Ernest P; Kinyua, Joyceline G; Mwangi, Joseph; Osman, Saida; Lagat, Nancy J; Muriuki, Joseph; Okoth, Vincent; Gicheru, Michael; Ng'ang'a, Zipporah; Songok, Elijah M

    2012-05-01

    HIV genetic recombination and high mutation rate increase diversity allowing it to escape from host immune response or antiretroviral drugs. This diversity has enabled specific viral subtypes to be predominant in specific regions. To determine HIV-1 subtypes among seropositive antenatal clinic attendees in Kenya's North Rift Valley, a cross-sectional study was carried out on 116 HIV-1-positive blood samples. Proviral DNA was extracted from peripheral blood mononuclear cells by DNAzol lysis and ethanol precipitation. Polymerase chain reactions using specific primers for HIV-1 gag and population sequencing on resulting amplicons were carried out. Phylogenetic analysis revealed that 81 (70%) were subtype A1, 13 (11%) subtype D, 8 (7%) subtype C, 3 (3%) subtype A2, 1 (1%) subtype G, and 10 showed possible recombinants: 5 (4%) subtype A1D, 4 (3%) subtype A1C, and 1 (1%) subtype A2C. These data support the need to establish circulating subtypes for better evaluation of effective HIV diagnostic and treatment options in Kenya. PMID:21827277

  16. Modeling the impact of climate change on the dynamics of Rift Valley Fever.

    PubMed

    Mpeshe, Saul C; Luboobi, Livingstone S; Nkansah-Gyekye, Yaw

    2014-01-01

    A deterministic SEIR model of rift valley fever (RVF) with climate change parameters was considered to compute the basic reproduction number ℛ 0 and investigate the impact of temperature and precipitation on ℛ 0. To study the effect of model parameters to ℛ 0, sensitivity and elasticity analysis of ℛ 0 were performed. When temperature and precipitation effects are not considered, ℛ 0 is more sensitive to the expected number of infected Aedes spp. due to one infected livestock and more elastic to the expected number of infected livestock due to one infected Aedes spp. When climatic data are used, ℛ 0 is found to be more sensitive and elastic to the expected number of infected eggs laid by Aedes spp. via transovarial transmission, followed by the expected number of infected livestock due to one infected Aedes spp. and the expected number of infected Aedes spp. due to one infected livestock for both regions Arusha and Dodoma. These results call for attention to parameters regarding incubation period, the adequate contact rate of Aedes spp. and livestock, the infective periods of livestock and Aedes spp., and the vertical transmission in Aedes species. PMID:24795775

  17. Inhibition of Rift Valley Fever Virus Replication and Perturbation of Nucleocapsid-RNA Interactions by Suramin

    PubMed Central

    Ellenbecker, Mary; Lanchy, Jean-Marc

    2014-01-01

    Rift Valley fever virus (RVFV) is an emerging infectious pathogen that causes severe disease in humans and livestock and has the potential for global spread. There are currently no proven safe and effective treatment options for RVFV infection. Inhibition of RNA binding to RVFV nucleocapsid protein (N) represents an attractive antiviral therapeutic strategy because several essential steps in the RVFV replication cycle involve N binding to viral RNA. In this study, we demonstrate the therapeutic potential of the drug suramin by showing that it functions well as an inhibitor of RVFV replication at multiple stages in human cell culture. Suramin has been used previously to treat trypanosomiasis in Africa. We characterize the dynamic and cooperative nature of N-RNA binding interactions and the dissociation of high-molecular-mass ribonucleoprotein complexes using suramin, which we previously identified as an N-RNA binding inhibitor in a high-throughput screen. Finally, we elucidate the molecular mechanism used by suramin in vitro to disrupt both specific and nonspecific binding events important for ribonucleoprotein formation. PMID:25267680

  18. Has Rift Valley fever virus evolved with increasing severity in human populations in East Africa?

    PubMed

    Baba, Marycelin; Masiga, Daniel K; Sang, Rosemary; Villinger, Jandouwe

    2016-01-01

    Rift Valley fever (RVF) outbreaks have occurred across eastern Africa from 1912 to 2010 approximately every 4-15 years, most of which have not been accompanied by significant epidemics in human populations. However, human epidemics during RVF outbreaks in eastern Africa have involved 478 deaths in 1998, 1107 reported cases with 350 deaths from 2006 to 2007 and 1174 cases with 241 deaths in 2008. We review the history of RVF outbreaks in eastern Africa to identify the epidemiological factors that could have influenced its increasing severity in humans. Diverse ecological factors influence outbreak frequency, whereas virus evolution has a greater impact on its virulence in hosts. Several factors could have influenced the lack of information on RVF in humans during earlier outbreaks, but the explosive nature of human RVF epidemics in recent years mirrors the evolutionary trend of the virus. Comparisons between isolates from different outbreaks have revealed an accumulation of genetic mutations and genomic reassortments that have diversified RVF virus genomes over several decades. The threat to humans posed by the diversified RVF virus strains increases the potential public health and socioeconomic impacts of future outbreaks. Understanding the shifting RVF epidemiology as determined by its evolution is key to developing new strategies for outbreak mitigation and prevention of future human RVF casualties. PMID:27329846

  19. Respiratory infectivity of a recently isolated Egyptian strain of Rift Valley fever virus.

    PubMed Central

    Brown, J L; Dominik, J W; Morrissey, R L

    1981-01-01

    The respiratory infectivity of a strain of Rift Valley fever virus isolated in Egypt (strain ZH-501) was compared with that of one isolate from Uganda (Entebbe strain) and two isolates from South Africa (strains SA-51 and SA-75). Studies were performed with ICR mice which were infected by exposure to infectious aerosols composed of particles with a mass median diameter of 0.96 micrometer. The respiratory median lethal doses for ZH-501, Entebbe, SA-51, and SA-75 were 2.2, 1.9, 2.6, and 1.9 log10 plaque-forming units, respectively. Although these values are statistically different, the biological implications of such differences seem unimportant. In an additional study of pathogenesis, a single group of mice was infected with 3.1 log10 plaque-forming units of ZH-501, and tissues were assayed sequentially through 96 h postinfection. Between 6 and 30 h, demonstration of an increasing virus concentration only in the lungs indicated that initial replication occurred there; however, determination of histopathological changes did not reveal evidence of pneumonia. Virus was isolated from the liver by 48 h, and the ultimate outcome of infection was a fulminating and fatal hepatic necrosis. PMID:7287187

  20. Surveillance of Rift Valley Fever Virus in Mosquito Vectors of the Republic of Korea.

    PubMed

    Kim, Hyun-Joo; Lyoo, Hye-Rhyoung; Park, Jee-Yong; Choi, Jeong-Soo; Lee, Ji-Youn; Jeoung, Hye-Young; Cho, Yun-Sang; Cho, In-Soo; Yoo, Han Sang

    2016-02-01

    Rift Valley fever (RVF) is an acute mosquito-borne viral zoonotic disease that affects mainly domestic ruminants and humans. RVF virus (RVFV) was first identified in Kenya in 1931 and was reported to be endemic in Africa but has recently spread to the Arabian Peninsula. With increasing climate change and globalization of trade in animals and animal products, there is great concern that the disease will spread worldwide to regions such as Europe, Asia, and the Americas. Although RVFV has not been reported in the Republic of Korea (ROK), the possibility of RVFV introduction is increasing because transmissible mosquito vectors are present and direct flights to Africa were added in 2012. For these reasons, we conducted a surveillance study to detect RVFV in mosquito vectors collected around the airport and harbor from 2012 to 2013. A total of 36,734 mosquitoes were collected and tested by real-time RT-PCR. A total of 1837 mosquito pools were used, and all were confirmed to be negative. This is the first report in the ROK concerning RVFV surveillance in mosquito vectors, and continuous surveillance will be conducted for the early warning of RVFV introduction. PMID:26771529

  1. Risk factors associated with Rift Valley fever epidemics in South Africa in 2008-11.

    PubMed

    Métras, Raphaëlle; Jewell, Chris; Porphyre, Thibaud; Thompson, Peter N; Pfeiffer, Dirk U; Collins, Lisa M; White, Richard G

    2015-01-01

    Rift Valley fever (RVF) is a zoonotic and vector-borne disease, mainly present in Africa, which represents a threat to human health, animal health and production. South Africa has experienced three major RVF epidemics (1950-51, 1973-75 and 2008-11). Due to data scarcity, no previous study has quantified risk factors associated with RVF epidemics in animals in South Africa. Using the 2008-11 epidemic datasets, a retrospective longitudinal study was conducted to identify and quantify spatial and temporal environmental factors associated with RVF incidence. Cox regressions with a Besag model to account for the spatial effects were fitted to the data. Coefficients were estimated by Bayesian inference using integrated nested Laplace approximation. An increase in vegetation density was the most important risk factor until 2010. In 2010, increased temperature was the major risk factor. In 2011, after the large 2010 epidemic wave, these associations were reversed, potentially confounded by immunity in animals, probably resulting from earlier infection and vaccination. Both vegetation density and temperature should be considered together in the development of risk management strategies. However, the crucial need for improved access to data on population at risk, animal movements and vaccine use is highlighted to improve model predictions. PMID:25804974

  2. Mapping a Major Gene for Resistance to Rift Valley Fever Virus in Laboratory Rats.

    PubMed

    Busch, Catherine M; Callicott, Ralph J; Peters, Clarence J; Morrill, John C; Womack, James E

    2015-01-01

    The Rift Valley Fever virus (RVFV) presents an epidemic and epizootic threat in sub-Saharan Africa, Egypt, and the Arabian Peninsula, and has furthermore recently gained attention as a potential weapon of bioterrorism due to its ability to infect both livestock and humans. Inbred rat strains show similar characteristic responses to the disease as humans and livestock, making them a suitable model species. Previous studies had indicated differences in susceptibility to RVFV hepatic disease among various rat strains, including a higher susceptibility of Wistar-Furth (WF) compared to a more resistant Lewis (LEW) strain. Further study revealed that this resistance trait exhibits the pattern of a major dominant gene inherited in Mendelian fashion. A genome scan of a congenic WF.LEW strain, created from the susceptible WF and resistant LEW strains and itself resistant to infection with RVFV, revealed 2 potential regions for the location of the gene, 1 on chromosome 3 and the other on chromosome 9. Through backcrossing of WF.LEW rats to WF rats, genotyping offspring using SNPs and microsatellites, and viral challenges of 3 N1 litters, we have mapped the gene to the distal end of chromosome 3. PMID:26546799

  3. Mutational Analysis of the Rift Valley Fever Virus Glycoprotein Precursor Proteins for Gn Protein Expression.

    PubMed

    Phoenix, Inaia; Lokugamage, Nandadeva; Nishiyama, Shoko; Ikegami, Tetsuro

    2016-01-01

    The Rift Valley fever virus (RVFV) M-segment encodes the 78 kD, NSm, Gn, and Gc proteins. The 1st AUG generates the 78 kD-Gc precursor, the 2nd AUG generates the NSm-Gn-Gc precursor, and the 3rd AUG makes the NSm'-Gn-Gc precursor. To understand biological changes due to abolishment of the precursors, we quantitatively measured Gn secretion using a reporter assay, in which a Gaussia luciferase (gLuc) protein is fused to the RVFV M-segment pre-Gn region. Using the reporter assay, the relative expression of Gn/gLuc fusion proteins was analyzed among various AUG mutants. The reporter assay showed efficient secretion of Gn/gLuc protein from the precursor made from the 2nd AUG, while the removal of the untranslated region upstream of the 2nd AUG (AUG2-M) increased the secretion of the Gn/gLuc protein. Subsequently, recombinant MP-12 strains encoding mutations in the pre-Gn region were rescued, and virological phenotypes were characterized. Recombinant MP-12 encoding the AUG2-M mutation replicated slightly less efficiently than the control, indicating that viral replication is further influenced by the biological processes occurring after Gn expression, rather than the Gn abundance. This study showed that, not only the abolishment of AUG, but also the truncation of viral UTR, affects the expression of Gn protein by the RVFV M-segment. PMID:27231931

  4. Enhanced Detection of Rift Valley Fever Virus using Molecular Assays on Whole Blood Samples

    PubMed Central

    Grolla, Allen; Mehedi, Masfique; Lindsay, Robbin; Bosio, Catharine; Duse, Adriano; Feldmann, Heinz

    2012-01-01

    Background Rift Valley fever (RVF) is an emerging arthropod-borne zoonoses of global agricultural and public health importance. In December 2006, an RVF outbreak was recognized in Kenya which led to the deployment of international response laboratory teams to the area. Objectives A field laboratory was operated in Malindi, Kenya to provide safe sample handling and molecular testing for RVF virus (RVFV) as well as selected other pathogens for differential diagnosis. Study Design Safe sample handling was carried out using a negative pressure flexible film isolator (glovebox) and commercial reagents to inactivate clinical specimens and purify nucleic acid. Whole blood was routinely used for diagnostic testing although paired plasma samples were also tested in select cases. Subsequently, human macrophages were tested in vitro for their susceptibility to RVFV. Results The field laboratory received samples from 33 individuals and a definite laboratory diagnosis was provided in 16 of these cases. Using molecular diagnostic techniques, RVFV was more consistently detected in whole blood than in plasma samples most likely due to association of RVFV with blood cells. Subsequent in vitro studies identified macrophages as a target cell for RVFV replication. Conclusions RVFV appears to replicate in blood cells such as macrophages. Thus, the sensitivity of molecular diagnostic testing is improved if whole blood is used as the clinical specimen rather than plasma or serum. PMID:22632901

  5. Bovine trypanosomosis and Glossina distribution in selected areas of southern part of Rift Valley, Ethiopia.

    PubMed

    Sheferaw, Desie; Birhanu, Belay; Asrade, Biruhtesfa; Abera, Mesele; Tusse, Turist; Fikadu, Amha; Denbarga, Yifat; Gona, Zemedkun; Regassa, Alemayehu; Moje, Nebyou; Kussito, Engida; Mekibib, Berhanu; Asefa, Teshome; Woldesenbet, Zerihun

    2016-02-01

    Cross-sectional study was conducted in 9 selected districts of the southern part the Rift Valley, Ethiopia to estimate the dry period prevalence of bovine trypanosomosis as well as assessment of Glossina species. From a total of 1838 cattle examined for trypanosomosis by buffy coat technique 133 (7.2%) were found infected by trypanosome species. From the total positive animals 66.9 and 33.1% of them accounted to Trypanosoma congolense and Trypanosoma vivax, respectively. Significantly higher prevalence (19.4%., P<0.05) was recorded at Arba-Mnch district. Black colored cattle were the most highly affected (χ(2)=79.35, P<0.05) animals. The overall average PCV value for parasitaemic and aparasitaemic animals was 22.2 (95% CI=21.6-22.7) and 27% (95% CI=26.8-27.2), respectively. The fly caught per trap per day was 1.4 for Glossina species and 2.8 for other biting flies. Two species of Glossina identified namely Glossina pallidipes and Glossina fuscipes. PMID:26581831

  6. Development and characterization of Rift Valley fever virus-like particles.

    PubMed

    Li, Y T; Wang, C L; Zheng, X X; Wang, H L; Zhao, Y K; Gai, W W; Jin, H L; Gao, Y W; Li, N; Yang, S T; Xia, X Z

    2016-01-01

    Rift Valley fever (RVF) is an acute, febrile zoonotic disease that is caused by the RVF virus (RVFV) and spread by arthropod vectors. RVF is currently prevalent in Africa and the Arabian Peninsula, and causes substantial economic losses. Furthermore, this disease poses a serious threat to animal and human health in regions worldwide, making it a serious public health concern. However, RVFV vaccines for human use are still unavailable, and hence there is an urgent need for novel efficient vaccines against RVFV. Vaccine preparation techniques have become a crucial factor in developing new vaccines. In the current study, the N and G protein genes of RVFV were inserted into the pFastBacDual baculovirus expression vector downstream of the pP10 and pPH promoters. The resultant recombinant vector, pFastBacDual-S-M, was transfected into Sf9 insect cells by lipofection. The recombinant baculovirus, named rBac-N-G, was retrieved and infected into Sf9 insect cells to generate RVFV virus-like particles (VLPs). Using polyclonal antibodies against RVFV proteins in immunofluorescence and western blot analyses, we positively identified the presence of the RVFV proteins in VLP preparations. Sucrose density gradient centrifugation and transmission electron microscopy revealed that the morphology of the RVFV VLPs was consistent with previous reports of RVFV virions. This study describes a technique for efficient production of RVFV VLPs, and has laid the foundation for future VLP-based RVFV vaccines. PMID:27050999

  7. Severe Rift Valley Fever May Present with a Characteristic Clinical Syndrome

    PubMed Central

    Kahlon, Summerpal S.; Peters, Clarence J.; LeDuc, James; Muchiri, Eric M.; Muiruri, Samuel; Njenga, M. Kariuki; Breiman, Robert F.; Clinton White, A.; King, Charles H.

    2010-01-01

    Rift Valley fever (RVF) virus is an emerging pathogen that is transmitted in many regions of sub-Saharan Africa, parts of Egypt, and the Arabian peninsula. Outbreaks of RVF, like other diseases caused by hemorrhagic fever viruses, typically present in locations with very limited health resources, where initial diagnosis must be based only on history and physical examination. Although general signs and symptoms of human RVF have been documented, a specific clinical syndrome has not been described. In 2007, a Kenyan outbreak of RVF provided opportunity to assess acutely ill RVF patients and better delineate its presentation and clinical course. Our data reveal an identifiable clinical syndrome suggestive of severe RVF, characterized by fever, large-joint arthralgia, and gastrointestinal complaints and later followed by jaundice, right upper-quadrant pain, and delirium, often coinciding with hemorrhagic manifestations. Further characterization of a distinct RVF clinical syndrome will aid earlier detection of RVF outbreaks and should allow more rapid implementation of control. PMID:20207858

  8. Rift Valley Fever Virus Epidemic in Kenya, 2006/2007: The Entomologic Investigations

    PubMed Central

    Sang, Rosemary; Kioko, Elizabeth; Lutomiah, Joel; Warigia, Marion; Ochieng, Caroline; O'Guinn, Monica; Lee, John S.; Koka, Hellen; Godsey, Marvin; Hoel, David; Hanafi, Hanafi; Miller, Barry; Schnabel, David; Breiman, Robert F.; Richardson, Jason

    2010-01-01

    In December 2006, Rift Valley fever (RVF) was diagnosed in humans in Garissa Hospital, Kenya and an outbreak reported affecting 11 districts. Entomologic surveillance was performed in four districts to determine the epidemic/epizootic vectors of RVF virus (RVFV). Approximately 297,000 mosquitoes were collected, 164,626 identified to species, 72,058 sorted into 3,003 pools and tested for RVFV by reverse transcription-polymerase chain reaction. Seventy-seven pools representing 10 species tested positive for RVFV, including Aedes mcintoshi/circumluteolus (26 pools), Aedes ochraceus (23 pools), Mansonia uniformis (15 pools); Culex poicilipes, Culex bitaeniorhynchus (3 pools each); Anopheles squamosus, Mansonia africana (2 pools each); Culex quinquefasciatus, Culex univittatus, Aedes pembaensis (1 pool each). Positive Ae. pembaensis, Cx. univittatus, and Cx. bitaeniorhynchus was a first time observation. Species composition, densities, and infection varied among districts supporting hypothesis that different mosquito species serve as epizootic/epidemic vectors of RVFV in diverse ecologies, creating a complex epidemiologic pattern in East Africa. PMID:20682903

  9. Wicking assay for the rapid detection of Rift Valley fever viral antigens in mosquitoes (Diptera: Culicidae).

    PubMed

    Turell, M; Davé, K; Mayda, M; Parker, Z; Coleman, R; Davé, S; Strickman, D

    2011-05-01

    Rift Valley fever virus (RVFV) causes outbreaks of severe disease in domestic ungulates as well as humans in Africa. There is a logical concern that RVFV could be introduced into the Americas and cause significant health and economic damage based on the precedent of the introduction and spread of West Nile virus (WNV). Unfortunately, there are currently no licensed diagnostic assays available for RVFV in the Americas. In this work, we report on the ability of a novel dipstick assay, VectorTest RVFV antigen assay, modeled on the VecTest assay for WNV, to detect a RVFV-infected female within a pool of mosquitoes. The dipsticks provided results in <20 min, were easy to use, and did not require a laboratory with containment facilities. Although readily able to detect a mosquito with a disseminated RVFV infection, it only occasionally detected RVFV in a mosquito with a nondisseminated infection, and therefore may fail to detect some pools that actually contain one or more positive mosquitoes. The RVFV dipstick assay was highly specific and did not react with samples to which had been added yellow fever, West Nile, Venezuelan equine encephalitis, sandfly fever Naples, sandfly fever Sicilian, or sandfly fever Toscana viruses. The RVFV assay can provide a rapid, safe, easy-to-use assay to alert public health personnel to the presence of RVFV in mosquitoes. Results from this assay will allow a rapid threat assessment and the focusing of vector control measures in high-risk areas. PMID:21661324

  10. Mutational Analysis of the Rift Valley Fever Virus Glycoprotein Precursor Proteins for Gn Protein Expression

    PubMed Central

    Phoenix, Inaia; Lokugamage, Nandadeva; Nishiyama, Shoko; Ikegami, Tetsuro

    2016-01-01

    The Rift Valley fever virus (RVFV) M-segment encodes the 78 kD, NSm, Gn, and Gc proteins. The 1st AUG generates the 78 kD-Gc precursor, the 2nd AUG generates the NSm-Gn-Gc precursor, and the 3rd AUG makes the NSm’-Gn-Gc precursor. To understand biological changes due to abolishment of the precursors, we quantitatively measured Gn secretion using a reporter assay, in which a Gaussia luciferase (gLuc) protein is fused to the RVFV M-segment pre-Gn region. Using the reporter assay, the relative expression of Gn/gLuc fusion proteins was analyzed among various AUG mutants. The reporter assay showed efficient secretion of Gn/gLuc protein from the precursor made from the 2nd AUG, while the removal of the untranslated region upstream of the 2nd AUG (AUG2-M) increased the secretion of the Gn/gLuc protein. Subsequently, recombinant MP-12 strains encoding mutations in the pre-Gn region were rescued, and virological phenotypes were characterized. Recombinant MP-12 encoding the AUG2-M mutation replicated slightly less efficiently than the control, indicating that viral replication is further influenced by the biological processes occurring after Gn expression, rather than the Gn abundance. This study showed that, not only the abolishment of AUG, but also the truncation of viral UTR, affects the expression of Gn protein by the RVFV M-segment. PMID:27231931

  11. Elevated Antibodies against Rift Valley Fever Virus among Humans with Exposure to Ruminants in Saudi Arabia

    PubMed Central

    Memish, Ziad A.; Masri, Malak A.; Anderson, Benjamin D.; Heil, Gary L.; Merrill, Hunter R.; Khan, Salah U.; Alsahly, Ahmad; Gray, Gregory C.

    2015-01-01

    In 2000, an outbreak of Rift Valley fever virus (RVFV) occurred in the Kingdom of Saudi Arabia (KSA). Since then there have been sparse efforts to monitor for RVFV reemergence. During 2012, we enrolled 300 individuals with ruminant exposure and 50 age-group matched non-exposed controls in southwestern KSA, in a cross-sectional epidemiological study of RVFV. Sera from the participants were screened with an enzyme-linked immunosorbent assay (ELISA) for anti-RVFV IgG antibodies of which 39 (11.1%) were positive. Sixteen (41.0%) of those 39 were also positive by a plaque reduction neutralization assay (PRNT). The PRNT-positive subjects were further studied with an IgM ELISA and one was positive. No RVFV was detected in the 350 sera using real-time reverse transcription polymerase chain reaction. Contact with cattle (odds ratio [OR] = 3.16, 95% confidence interval [CI] 1.01, 9.90) and a history of chronic medical illness (OR = 6.41, 95% CI 1.75, 23.44) were associated with greater odds of RVFV seropositivity by PRNT. The IgM-positive participant was 36 years of age, and reported multiple risk factors for ruminant contact. Although these findings simply may be vestiges of the 2000 epidemic, KSA's frequent visits from pilgrims and importations of live animals from RVFV-endemic areas suggest that more comprehensive surveillance for imported RVFV virus in ruminants, mosquitoes, and travelers is imperative. PMID:25646253

  12. Potential for mosquitoes (Diptera: Culicidae) from Florida to transmit Rift Valley fever virus.

    PubMed

    Turell, Michael J; Britch, Seth C; Aldridge, Robert L; Kline, Daniel L; Boohene, Carl; Linthicum, Kenneth J

    2013-09-01

    We evaluated Aedes atlanticus Dyar and Knab, Aedes infirmatus Dyar and Knab, Aedes vexans (Meigen), Anopheles crucians Wiedemann, Coquillettidia perturbans (Walker), Culex nigripalpus Theobald, Mansonia dyari Belkin, Heinemann, and Page, and Psorophora ferox (Von Humboldt) from Florida to determine which of these species should be targeted for control should Rift Valley fever virus (RVFV) be detected in North America. Female mosquitoes that had fed on adult hamsters inoculated with RVFV were incubated for 7-21 d at 26 degrees C, then allowed to refeed on susceptible hamsters, and tested to determine infection, dissemination, and transmission rates. We also inoculated mosquitoes intrathoracically, held them for 7 d, and then allowed them to feed on a susceptible hamster to check for a salivary gland barrier. When exposed to hamsters with viremias > or = 10(7.6) plaque-forming units per milliliter of blood, at least some individuals in each of the species tested became infected; however, Cx. nigripalpus, An. crucians, and Ae. infirmatus were essentially incompetent vectors in the laboratory because of either a midgut escape or salivary gland barrier. Each of the other species should be considered as potential vectors and would need to be controlled if RVFV were introduced into an area where they were found. Additional studies need to be conducted with other geographic populations of these species and to determine how environmental factors affect transmission. PMID:24180117

  13. Environmental change and Rift Valley fever in eastern Africa: projecting beyond HEALTHY FUTURES.

    PubMed

    Taylor, David; Hagenlocher, Michael; Jones, Anne E; Kienberger, Stefan; Leedale, Joseph; Morse, Andrew P

    2016-01-01

    Outbreaks of Rift Valley fever (RVF), a relatively recently emerged zoonosis endemic to large parts of sub-Saharan Africa that has the potential to spread beyond the continent, have profound health and socio-economic impacts, particularly in communities where resilience is already low. Here output from a new, dynamic disease model [the Liverpool RVF (LRVF) model], driven by downscaled, bias-corrected climate change data from an ensemble of global circulation models from the Inter-Sectoral Impact Model Intercomparison Project run according to two radiative forcing scenarios [representative concentration pathway (RCP)4.5 and RCP8.5], is combined with results of a spatial assessment of social vulnerability to the disease in eastern Africa. The combined approach allowed for analyses of spatial and temporal variations in the risk of RVF to the end of the current century. Results for both scenarios highlight the high-risk of future RVF outbreaks, including in parts of eastern Africa to date unaffected by the disease. The results also highlight the risk of spread from/to countries adjacent to the study area, and possibly farther afield, and the value of considering the geography of future projections of disease risk. Based on the results, there is a clear need to remain vigilant and to invest not only in surveillance and early warning systems, but also in addressing the socio-economic factors that underpin social vulnerability in order to mitigate, effectively, future impacts. PMID:27063733

  14. Massive sulfides in a sedimented rift valley, northern Juan de Fuca Ridge

    NASA Astrophysics Data System (ADS)

    Davis, Earl E.; Goodfellow, Wayne D.; Bornhold, Brian D.; Adshead, John; Blaise, Bertrand; Villinger, Heiner; Le Cheminant, Gina M.

    1987-03-01

    A number of mounds each several hundred meters across and up to sixty meters high have been observed with SeaMARC II acoustic imagery and Seabeam bathymetry in the sediment-filled axial valley at the northern end of the Juan de Fuca Ridge. The mounds are located a few kilometers west of the eastern valley-bounding normal fault scarp where the local sediment fill is approximately 300 m thick. All of the mounds are believed to be of hydrothermal origin, and one is associated with anomalously high heat flow in excess of 1 W m -2. A piston core collected from that mound comprises coarse clastic sulfide units interbedded with sulfidic muds. Hydrothermal minerals present in the 2.3 m section include pyrrhotite, pyrite, marcasite, sphalerite, chalcopyrite, iss (intermediate solid solution in the Cu sbnd Fe sbnd Zn sbnd S system), chalcopyrrhotite, galena, talc, barite, and amorphous silica. Mineral fabrics of the clasts indicate that the material was precipitated at or near the sea floor by mixing of hot hydrothermal fluids with cold seawater. Low concentrations of Zn, Cu, Cd, and Ag relative to those found in unsedimented ridge hydrothermal deposits, and the presence of pyrrhotite as an early phase mineral indicates that the vent fluids have been modified by reaction with sediments beneath the mound. Rapid sedimentation in a rift valley is clearly conducive to the formation of large hydrothermal mineral deposits like those believed to be present within and beneath these mounds. The relatively impermeable sediment cover insulates the crust, inhibits groundwater recharge, promotes long-lived discharge at a restricted number of sites, provides a substrate for the efficient subsurface precipitation of minerals, and through continued sedimentation, protects surficial deposits from the corrosive effects of seawater. No reliable estimate of the bulk composition of the mounds can be made with existing data, but their size is comparable to major hydrothermal mineral deposits

  15. Inter-epidemic Acquisition of Rift Valley Fever Virus in Humans in Tanzania

    PubMed Central

    Sumaye, Robert David; Abatih, Emmanuel Nji; Thiry, Etienne; Amuri, Mbaraka; Berkvens, Dirk; Geubbels, Eveline

    2015-01-01

    Background In East Africa, epidemics of Rift Valley fever (RVF) occur in cycles of 5–15 years following unusually high rainfall. RVF transmission during inter-epidemic periods (IEP) generally passes undetected in absence of surveillance in mammalian hosts and vectors. We studied IEP transmission of RVF and evaluated the demographic, behavioural, occupational and spatial determinants of past RVF infection. Methodology Between March and August 2012 we collected blood samples, and administered a risk factor questionnaire among 606 inhabitants of 6 villages in the seasonally inundated Kilombero Valley, Tanzania. ELISA tests were used to detect RVFV IgM and IgG antibodies in serum samples. Risk factors were examined by mixed effects logistic regression. Findings RVF virus IgM antibodies, indicating recent RVFV acquisition, were detected in 16 participants, representing 2.6% overall and in 22.5% of inhibition ELISA positives (n = 71). Four of 16 (25.0%) IgM positives and 11/71 (15.5%) of individuals with inhibition ELISA sero-positivity reported they had had no previous contact with host animals. Sero-positivity on inhibition ELISA was 11.7% (95% CI 9.2–14.5) and risk was elevated with age (odds ratio (OR) 1.03 per year; 95% CI 1.01–1.04), among milkers (OR 2.19; 95% CI 1.23–3.91), and individuals eating raw meat (OR 4.17; 95% CI 1.18–14.66). Households keeping livestock had a higher probability of having members with evidence of past infection (OR = 3.04, 95% CI = 1.42–6.48) than those that do not keep livestock. Conclusion There is inter-epidemic acquisition of RVFV in Kilombero Valley inhabitants. In the wake of declining malaria incidence, these findings underscore the need for clinicians to consider RVF in the differential diagnosis for febrile illnesses. Several types of direct contact with livestock are important risk factors for past infection with RVFV in this study’s population. However, at least part of RVFV transmission appears to have occurred

  16. Contribution of Transverse Structures, Magma, and Crustal Fluids to Continental Rift Evolution: The East African Rift in Southern Kenya

    NASA Astrophysics Data System (ADS)

    Kattenhorn, S. A.; Muirhead, J.; Dindi, E.; Fischer, T. P.; Lee, H.; Ebinger, C. J.

    2013-12-01

    The Magadi rift in southern Kenya formed at ~7 Ma within Proterozoic rocks of the Mozambique orogenic belt, parallel to its contact with the Archean Tanzania craton. The rift is bounded to the west by the ~1600-m-high Nguruman border fault. The rift center is intensely dissected by normal faults, most of which offset ~1.4-0.8 Ma lavas. Current E-W extensional velocities are ~2-4 mm/yr. Published crustal tomography models from the rift center show narrow high velocity zones in the upper crust, interpreted as cooled magma intrusions. Local, surface-wave, and SKS-splitting measurements show a rift-parallel anisotropy interpreted to be the result of aligned melt zones in the lithosphere. Our field observations suggest that recent fault activity is concentrated at the rift center, consistent with the location of the 1998 seismic swarm that was associated with an inferred diking event. Fault zones are pervasively mineralized by calcite, likely from CO2-rich fluids. A system of fault-fed springs provides the sole fluid input for Lake Magadi in the deepest part of the basin. Many of these springs emanate from the Kordjya fault, a 50-km-long, NW-SE striking, transverse structure connecting a portion of the border fault system (the NW-oriented Lengitoto fault) to the current locus of strain and magmatism at the rift center. Sampled springs are warm (44.4°C) and alkaline (pH=10). Dissolved gas data (mainly N2-Ar-He) suggests two-component mixing (mantle and air), possibly indicating that fluids are delivered into the fault zone from deep sources, consistent with a dominant role of magmatism to the focusing of strain at the rift center. The Kordjya fault has developed prominent fault scarps (~150 m high) despite being oblique to the dominant ~N-S fault fabric, and has utilized an en echelon alignment of N-S faults to accommodate its motion. These N-S faults show evidence of sinistral-oblique motion and imply a bookshelf style of faulting to accommodate dextral-oblique motion

  17. Istopically Defined Source Reservoirs of Primitive Magmas in the East African Rift.

    NASA Astrophysics Data System (ADS)

    Rooney, T. O.; Furman, T.; Hanan, B.

    2005-12-01

    Extension within the East African Rift is a function of the interaction between plume-driven uplift and far-field stresses associated with plate tectonic processes. Geochemical and isotopic investigation of primitive basalts from the Main Ethiopian Rift (MER) reveals systematic spatial variations in the contributions from distinct and identifiable source reservoirs that, in turn help identify the mechanisms by which along-axis rifting has progressed. The Sr-Nd-Pb isotopic characteristics of MER basalts can be described by a three-component mixing model involving the long-lived Afar plume, a depleted mantle component similar to the source region for Gulf of Aden MORB from east of 48° E and a reservoir that is likely lithospheric (sub-continental mantle lithosphere, magmatic underplate or lower crust). Quaternary basalts in the central MER exhibit a systematic decrease in plume influence southward from 9.5° N to 8° N, i.e., away from the modern surface expression of the Afar plume in Djibouti and Erta 'Ale. The composition of the Afar plume component is comparable to the "C" mantle reservoir. This southward decrease in plume influence is coupled with an increase in the influence of the lithospheric and depleted mantle components. Linear arrays observed within Pb-Pb isotopic space at each eruptive center require distinctive ratio of lithospheric + depleted mantle components mixing with variable amounts of the "C"-like plume component. This isotopic evidence suggests the depleted mantle and lithosphere mixed prior to the generation of the recent magmas. To the south, the Sr-Nd-Pb isotopic compositions of Turkana (Kenya) rift basalts record a mix of a similar "C"-like plume component and a fourth HIMU-like source component. Low 3He/4He values observed in the HIMU-dominated lavas from Turkana contrast with the higher ratios found in basalts associated with the "C"-like Afar plume. Further analysis of "C"-HIMU lavas at Turkana is required to fully constrain the He

  18. Application of P- and S-receiver functions to investigate crustal and upper mantle structures beneath the Albertine branch of the East African Rift System

    NASA Astrophysics Data System (ADS)

    Gummert, Michael; Lindenfeld, Michael; Wölbern, Ingo; Rümpker, Georg; Kasereka, Celestin; Batte, Arthur

    2014-05-01

    The Rwenzori region at the border between Uganda and the Democratic Republic of Congo is part of the western (Albertine) branch of the East African Rift System (EARS). The region is characterized by a horst structure, the Rwenzori Mountains, reaching elevations of more than 5 km and covering an area of about 120 km by 50 km. The unusual location of the mountain range, between two segments of the Albertine rift, suggests complex structures of the crust and the upper mantle below. In our study, we employ P- and S-receiver functions in order to investigate the corresponding discontinuities of the lithosphere-asthenosphere system. The analyses are based on recordings from a dense network of 33 seismic broadband stations operating in the region for a period of nearly two years, from September 2009 until August 2011. The crustal thickness is analysed by using P-receiver functions and the grid search method of Zhu & Kanamori (2000) which involves the stacking of amplitudes of direct converted (Ps) and multiple phases (PpPs and PpSs) originating from the Moho. The method of S-receiver functions is more effective in analysing deeper discontinuities of the upper mantle, such as the lithosphere-asthenosphere boundary (LAB). The latter method also has the advantage that the interfering influence of multiple phases from shallower discontinuities is avoided. To simplify the analysis of the S-receiver functions, we use an automatic procedure to determine incidence angles used in the rotation from the ZNE system to the ray-centered LQT system. We apply this approach to confirm and significantly extend results from the study of Wölbern et al. (2012), which provided evidence for an intra-lithospheric discontinuity at depths between 54 km and 104 km and the LAB between 135 km and 210 km. Our results provide evidence for significant variations of crustal thickness beneath the region. The Moho depth varies between 20 km beneath the rift valley and 39 km beneath the adjacent rift

  19. The Late Oligocene to Early Miocene early evolution of rifting in the southwestern part of the Roer Valley Graben

    NASA Astrophysics Data System (ADS)

    Deckers, Jef

    2016-06-01

    The Roer Valley Graben is a Mesozoic continental rift basin that was reactivated during the Late Oligocene. The study area is located in the graben area of the southwestern part of the Roer Valley Graben. Rifting initiated in the study area with the development of a large number of faults in the prerift strata. Some of these faults were rooted in preexisting zones of weakness in the Mesozoic strata. Early in the Late Oligocene, several faults died out in the study area as strain became focused upon others, some of which were able to link into several-kilometer-long systems. Within the Late Oligocene to Early Miocene northwestward prograding shallow marine syn-rift deposits, the number of active faults further decreased with time. A relatively strong decrease was observed around the Oligocene/Miocene boundary and represents a further focus of strain onto the long fault systems. Miocene extensional strain was not accommodated by further growth, but predominantly by displacements along the long fault systems. Since the Oligocene/Miocene boundary coincides with a radical change in the European intraplate stress field, the latter might have contributed significantly to the simultaneous change of fault kinematics in the study area.

  20. Two Plumes Beneath the East African Rift System: a Geochemical Investigation into Possible Interactions in Ethiopia

    NASA Astrophysics Data System (ADS)

    Nelson, W. R.; Furman, T.; van Keken, P. E.; Lin, S.

    2007-12-01

    East African Rift System magmatism began over 40 my ago and has continued through the present. Numerical models have determined two plumes are necessary to create the spatial and temporal distribution of volcanism. Geochemical data support the presence of two chemically distinct plumes initially located beneath the Afar Depression (NE Ethiopia) and the Turkana Depression (SW Ethiopia/N Kenya). The timing and eruptive of the Afar and Kenya plumes are also distinct. While there is growing evidence to support the existence of two dynamically and chemically distinct plumes beneath the East African Rift System, the interactions between them remain unclear. Our study focuses on the geochemistry of mafic shield lavas from three locations on the eastern flank of the Ethiopian plateau. These lavas are spatially located between the surface manifestation of the Afar and Kenya plumes. The majority of the lava is alkaline and has experienced varying degrees of olivine and pyroxene fractionation. The northernmost lavas (9°10'N) are transitional and display the most fractionation. Primitive mantle melts were generated at depths near the fertile mantle garnet-spinel transition zone and deeper (80-100km) and are free of metasomatic influence. Minor HREE depletions also support derivation of melts from a garnet-bearing source. Lavas with lithospheric influence are generated from shallower depths and show minor amphibole influence. Overall, geochemical data show the lavas in this study closely resemble those from various episodes of Kenya plume magmatism with modifications attributed to lithospheric contamination. This interpretation is consistent with current numerical models suggesting episodic northward movement of Kenya plume magmas along the lithosphere-asthenosphere boundary. The data imply that the Kenya plume has a much larger spatial influence and therefore a larger geodynamic influence in the EARS than previously recognized.

  1. Giant seismites and megablock uplift in the East African Rift: evidence for Late Pleistocene large magnitude earthquakes.

    PubMed

    Hilbert-Wolf, Hannah Louise; Roberts, Eric M

    2015-01-01

    In lieu of comprehensive instrumental seismic monitoring, short historical records, and limited fault trench investigations for many seismically active areas, the sedimentary record provides important archives of seismicity in the form of preserved horizons of soft-sediment deformation features, termed seismites. Here we report on extensive seismites in the Late Quaternary-Recent (≤ ~ 28,000 years BP) alluvial and lacustrine strata of the Rukwa Rift Basin, a segment of the Western Branch of the East African Rift System. We document examples of the most highly deformed sediments in shallow, subsurface strata close to the regional capital of Mbeya, Tanzania. This includes a remarkable, clastic 'megablock complex' that preserves remobilized sediment below vertically displaced blocks of intact strata (megablocks), some in excess of 20 m-wide. Documentation of these seismites expands the database of seismogenic sedimentary structures, and attests to large magnitude, Late Pleistocene-Recent earthquakes along the Western Branch of the East African Rift System. Understanding how seismicity deforms near-surface sediments is critical for predicting and preparing for modern seismic hazards, especially along the East African Rift and other tectonically active, developing regions. PMID:26042601

  2. Giant Seismites and Megablock Uplift in the East African Rift: Evidence for Late Pleistocene Large Magnitude Earthquakes

    PubMed Central

    Hilbert-Wolf, Hannah Louise; Roberts, Eric M.

    2015-01-01

    In lieu of comprehensive instrumental seismic monitoring, short historical records, and limited fault trench investigations for many seismically active areas, the sedimentary record provides important archives of seismicity in the form of preserved horizons of soft-sediment deformation features, termed seismites. Here we report on extensive seismites in the Late Quaternary-Recent (≤ ~ 28,000 years BP) alluvial and lacustrine strata of the Rukwa Rift Basin, a segment of the Western Branch of the East African Rift System. We document examples of the most highly deformed sediments in shallow, subsurface strata close to the regional capital of Mbeya, Tanzania. This includes a remarkable, clastic ‘megablock complex’ that preserves remobilized sediment below vertically displaced blocks of intact strata (megablocks), some in excess of 20 m-wide. Documentation of these seismites expands the database of seismogenic sedimentary structures, and attests to large magnitude, Late Pleistocene-Recent earthquakes along the Western Branch of the East African Rift System. Understanding how seismicity deforms near-surface sediments is critical for predicting and preparing for modern seismic hazards, especially along the East African Rift and other tectonically active, developing regions. PMID:26042601

  3. Ethiopian Central Rift Valley basin hydrologic modelling using HEC-HMS and ArcSWAT

    NASA Astrophysics Data System (ADS)

    Pascual-Ferrer, Jordi; Candela, Lucila; Pérez-Foguet, Agustí

    2013-04-01

    An Integrated Water Resources Management (IWRM) shall be applied to achieve a sustainable development, to increase population incomes without affecting lives of those who are highly dependent on the environment. First step should be to understand water dynamics at basin level, starting by modeling the basin water resources. For model implementation, a large number of data and parameters are required, but those are not always available, especially in some developing countries where different sources may have different data, there is lack of information on data collection, etc. The Ethiopian Central Rift Valley (CRV) is an endorheic basin covering an area of approximately 10,000 km2. For the period 1996-2005, the average annual volume of rainfall accounted for 9.1 Mm3, and evapotranspiration for 8 Mm3 (Jansen et al., 2007). From the environmental point of view, basin ecosystems are endangered due to human activities. Also, poverty is widespread all over the basin, with population mainly living from agriculture on a subsistence economy. Hence, there is an urgent need to set an IWRM, but datasets required for water dynamics simulation are not too reliable. In order to reduce uncertainty of numerical simulation, two semi-distributed open software hydrologic models were implemented: HEC-HMS and ArcSWAT. HEC-HMS was developed by the United States Army Corps of Engineers (USACoE) Hydrologic Engineering Center (HEC) to run precipitation-runoff simulations for a variety of applications in dendritic watershed systems. ArcSWAT includes the SWAT (Soil and Water Assessment Tool, Arnold et al., 1998) model developed for the USDA Agricultural Research Service into ArcGIS (ESRI®). SWAT was developed to assess the impact of land management practices on large complex watersheds with varying soils, land use and management conditions over long periods of time (Neitsch et al., 2005). According to this, ArcSWAT would be the best option for IWRM implementation in the basin. However

  4. History of the development of the East African Rift System: A series of interpreted maps through time

    NASA Astrophysics Data System (ADS)

    Macgregor, Duncan

    2015-01-01

    This review paper presents a series of time reconstruction maps of the 'East African Rift System' ('EARS'), illustrating the progressive development of fault trends, subsidence, volcanism and topography. These maps build on previous basin specific interpretations and integrate released data from recent petroleum drilling. N-S trending EARS rifting commenced in the petroliferous South Lokichar Basin of northern Kenya in the Late Eocene to Oligocene, though there seem to be few further deep rifts of this age other than those immediately adjoining it. At various times during the Mid-Late Miocene, a series of small rifts and depressions formed between Ethiopia and Malawi, heralding the main regional rift subsidence phase and further rift propagation in the Plio-Pleistocene. A wide variation is thus seen in the ages of initiation of EARS basins, though the majority of fault activity, structural growth, subsidence, and associated uplift of East Africa seem to have occurred in the last 5-9 Ma, and particularly in the last 1-2 Ma. These perceptions are key to our understanding of the influence of the diverse tectonic histories on the petroleum prospectivity of undrilled basins.

  5. Epidemiologic and Environmental Risk Factors of Rift Valley Fever in Southern Africa from 2008 to 2011

    PubMed Central

    Glancey, Margaret M.; Linthicum, Kenneth J.

    2015-01-01

    Abstract Background: Rift Valley fever (RVF) outbreaks have been associated with periods of widespread and above-normal rainfall over several months. Knowledge on the environmental factors influencing disease transmission dynamics has provided the basis for developing models to predict RVF outbreaks in Africa. From 2008 to 2011, South Africa experienced the worst wave of RVF outbreaks in almost 40 years. We investigated rainfall-associated environmental factors in southern Africa preceding these outbreaks. Methods: RVF epizootic records obtained from the World Animal Health Information Database (WAHID), documenting livestock species affected, location, and time, were analyzed. Environmental variables including rainfall and satellite-derived normalized difference vegetation index (NDVI) data were collected and assessed in outbreak regions to understand the underlying drivers of the outbreaks. Results: The predominant domestic vertebrate species affected in 2008 and 2009 were cattle, when outbreaks were concentrated in the eastern provinces of South Africa. In 2010 and 2011, outbreaks occurred in the interior and southern provinces affecting over 16,000 sheep. The highest number of cases occurred between January and April but epidemics occurred in different regions every year, moving from the northeast of South Africa toward the southwest with each progressing year. The outbreaks showed a pattern of increased rainfall preceding epizootics ranging from 9 to 152 days; however, NDVI and rainfall were less correlated with the start of the outbreaks than has been observed in eastern Africa. Conclusions: Analyses of the multiyear RVF outbreaks of 2008 to 2011 in South Africa indicated that rainfall, NDVI, and other environmental and geographical factors, such as land use, drainage, and topography, play a role in disease emergence. Current and future investigations into these factors will be able to contribute to improving spatial accuracy of models to map risk areas

  6. Rainwater harvesting for small-scale irrigation of maize in the Central Rift Valley, Ethiopia

    NASA Astrophysics Data System (ADS)

    Keesstra, Saskia; Hartog, Maaike; Muluneh, Alemayehu; Stroosnijder, Leo

    2013-04-01

    In the Central Rift Valley of Ethiopia, small scale farmers mostly rely on rainfall for crop production. The erratic nature of rainfall causes frequent crop failures and makes the region structurally dependent on food aid. Rainwater Harvesting (RWH) is a technique to collect and store runoff that could provide water for livestock, domestic use or small scale irrigation. Usually, such irrigation is promoted for high value crops, but in the light of regional food security it may become interesting to invest in irrigation of maize. In this research, two cemented RWH cisterns were investigated to determine their economic and social potential for supplemental irrigation of maize using drip irrigation. For this, data from test fields with irrigated maize and monitoring of water levels of the cisterns were used, as well as a survey under 30 farmers living close to the experimental site. The results show that catchment size and management should be in balance with the designed RWH system, to prevent too little runoff or flooding. An analysis with Cropwat 8.0 was used to investigate the possibility of irrigating maize with the observed amounts of water in the RWH cisterns. This would suffice for 0.3-0.8 ha of maize. For a RWH cistern with a drip irrigation system to be economically viable, the production on this acreage should become 3-4 ton/ha; 2.5 times higher than the current yield. But the biggest challenge would be to change the perception of respondents, who don't find it logical to spend precious water on a common crop like maize. Therefore, if the Ethiopian government considers the irrigation of maize to be important for regional food security, it is recommended to either subsidize the construction of RWH cisterns or provide credit on favourable terms.

  7. Predictive Factors and Risk Mapping for Rift Valley Fever Epidemics in Kenya

    PubMed Central

    Munyua, Peninah M.; Murithi, R. Mbabu; Ithondeka, Peter; Hightower, Allen; Thumbi, Samuel M.; Anyangu, Samuel A.; Kiplimo, Jusper; Bett, Bernard; Vrieling, Anton; Breiman, Robert F.; Njenga, M. Kariuki

    2016-01-01

    Background To-date, Rift Valley fever (RVF) outbreaks have occurred in 38 of the 69 administrative districts in Kenya. Using surveillance records collected between 1951 and 2007, we determined the risk of exposure and outcome of an RVF outbreak, examined the ecological and climatic factors associated with the outbreaks, and used these data to develop an RVF risk map for Kenya. Methods Exposure to RVF was evaluated as the proportion of the total outbreak years that each district was involved in prior epizootics, whereas risk of outcome was assessed as severity of observed disease in humans and animals for each district. A probability-impact weighted score (1 to 9) of the combined exposure and outcome risks was used to classify a district as high (score ≥ 5) or medium (score ≥2 - <5) risk, a classification that was subsequently subjected to expert group analysis for final risk level determination at the division levels (total = 391 divisions). Divisions that never reported RVF disease (score < 2) were classified as low risk. Using data from the 2006/07 RVF outbreak, the predictive risk factors for an RVF outbreak were identified. The predictive probabilities from the model were further used to develop an RVF risk map for Kenya. Results The final output was a RVF risk map that classified 101 of 391 divisions (26%) located in 21 districts as high risk, and 100 of 391 divisions (26%) located in 35 districts as medium risk and 190 divisions (48%) as low risk, including all 97 divisions in Nyanza and Western provinces. The risk of RVF was positively associated with Normalized Difference Vegetation Index (NDVI), low altitude below 1000m and high precipitation in areas with solonertz, luvisols and vertisols soil types (p <0.05). Conclusion RVF risk map serves as an important tool for developing and deploying prevention and control measures against the disease. PMID:26808021

  8. Remote Sensing in a Changing Climate and Environment: the Rift Valley Fever Case

    NASA Astrophysics Data System (ADS)

    Tourre, Y. M.; Lacaux, J.-P.; Vignolles, C.; Lafaye, M.

    2012-07-01

    Climate and environment are changing rapidly whilst global population already reached 7 billions people. New public health challenges are posed by new and re-emerging diseases. Innovation is a must i.e., 1) using high resolution remote sensing, 2) re-invent health politics and trans-disciplinary management. The above are part of the 'TransCube Approach' i.e., Transition, Translation, and Transformation. The new concept of Tele-epidemiology includes such approach. A conceptual approach (CA) associated with Rift Valley Fever (RVF) epidemics in Senegal is presented. Ponds are detected using high-resolution SPOT-5 satellite images and radar data from space. Data on rainfall events obtained from the Tropical Rainfall Measuring Mission (NASA/JAXA) are combined with in-situ data. Localization of vulnerable and parked hosts (obtained from QuickBird satellite) is also used. The dynamic spatio-temporal distribution and aggressiveness of RVF mosquitoes, are based on total rainfall amounts, ponds' dynamics and entomological observations. Detailed risks maps (hazards + vulnerability) in real-time are expressed in percentages of parks where animals are potentially at risks. This CA which simply relies upon rainfall distribution from space, is meant to contribute to the implementation of the RVF early warning system (RVFews). It is meant to be applied to other diseases and elsewhere. This is particularly true in new places where new vectors have been rapidly adapting (such as Aedes albopictus) whilst viruses (such as West Nile and Chikungunya,) circulate from constantly moving reservoirs and increasing population.

  9. International external quality assessment of molecular detection of Rift Valley fever virus.

    PubMed

    Escadafal, Camille; Paweska, Janusz T; Grobbelaar, Antoinette; le Roux, Chantel; Bouloy, Michèle; Patel, Pranav; Teichmann, Anette; Donoso-Mantke, Oliver; Niedrig, Matthias

    2013-01-01

    Rift Valley fever (RVF) is a viral zoonosis that primarily affects animals resulting in considerable economic losses due to death and abortions among infected livestock. RVF also affects humans with clinical symptoms ranging from an influenza-like illness to a hemorrhagic fever. Over the past years, RVF virus (RVFV) has caused severe outbreaks in livestock and humans throughout Africa and regions of the world previously regarded as free of the virus. This situation prompts the need to evaluate the diagnostic capacity and performance of laboratories worldwide. Diagnostic methods for RVFV detection include virus isolation, antigen and antibody detection methods, and nucleic acid amplification techniques. Molecular methods such as reverse-transcriptase polymerase chain reaction and other newly developed techniques allow for a rapid and accurate detection of RVFV. This study aims to assess the efficiency and accurateness of RVFV molecular diagnostic methods used by expert laboratories worldwide. Thirty expert laboratories from 16 countries received a panel of 14 samples which included RVFV preparations representing several genetic lineages, a specificity control and negative controls. In this study we present the results of the first international external quality assessment (EQA) for the molecular diagnosis of RVF. Optimal results were reported by 64% of the analyses, 21% of the analyses achieved acceptable results and 15% of the results revealed that there is need for improvement. Evenly good performances were achieved by specific protocols which can therefore be recommended as an accurate molecular protocol for the diagnosis of RVF. Other protocols showed uneven performances revealing the need for improved optimization and standardization of these protocols. PMID:23717706

  10. Modelling the effects of seasonality and socioeconomic impact on the transmission of rift valley Fever virus.

    PubMed

    Xiao, Yanyu; Beier, John C; Cantrell, Robert Stephen; Cosner, Chris; DeAngelis, Donald L; Ruan, Shigui

    2015-01-01

    Rift Valley fever (RVF) is an important mosquito-borne viral zoonosis in Africa and the Middle East that causes human deaths and significant economic losses due to huge incidences of death and abortion among infected livestock. Outbreaks of RVF are sporadic and associated with both seasonal and socioeconomic effects. Here we propose an almost periodic three-patch model to investigate the transmission dynamics of RVF virus (RVFV) among ruminants with spatial movements. Our findings indicate that, in Northeastern Africa, human activities, including those associated with the Eid al Adha feast, along with a combination of climatic factors such as rainfall level and hydrological variations, contribute to the transmission and dispersal of the disease pathogen. Moreover, sporadic outbreaks may occur when the two events occur together: 1) abundant livestock are recruited into areas at risk from RVF due to the demand for the religious festival and 2) abundant numbers of mosquitoes emerge. These two factors have been shown to have impacts on the severity of RVF outbreaks. Our numerical results present the transmission dynamics of the disease pathogen over both short and long periods of time, particularly during the festival time. Further, we investigate the impact on patterns of disease outbreaks in each patch brought by festival- and seasonal-driven factors, such as the number of livestock imported daily, the animal transportation speed from patch to patch, and the death rate induced by ceremonial sacrifices. In addition, our simulations show that when the time for festival preparation starts earlier than usual, the risk of massive disease outbreaks rises, particularly in patch 3 (the place where the religious ceremony will be held). PMID:25569474

  11. Characterizing the effect of Bortezomib on Rift Valley Fever Virus multiplication.

    PubMed

    Keck, Forrest; Amaya, Moushimi; Kehn-Hall, Kylene; Roberts, Brian; Bailey, Charles; Narayanan, Aarthi

    2015-08-01

    Rift Valley Fever Virus (RVFV) belongs to the family Bunyaviridae and is a known cause of epizootics and epidemics in Africa and the Middle East. With no FDA approved therapeutics available to treat RVFV infection, understanding the interactions between the virus and the infected host is crucial to developing novel therapeutic strategies. Here, we investigated the requirement of the ubiquitin-proteasome system (UPS) for the establishment of a productive RVFV infection. It was previously shown that the UPS plays a central role in RVFV multiplication involving degradation of PKR and p62 subunit of TFIIH. Using the FDA-approved proteasome inhibitor Bortezomib, we observed robust inhibition of intracellular and extracellular viral loads. Bortezomib treatment did not affect the nuclear/cytoplasmic distribution of the non-structural S-segment protein (NSs); however, the ability of NSs to form nuclear filaments was abolished as a result of Bortezomib treatment. In silico ubiquitination prediction analysis predicted that known NSs interactors (SAP30, YY1, and mSin3A) have multiple putative ubiquitination sites, while NSs itself was not predicted to be ubiquitinated. Immunoprecipitation studies indicated a decrease in interaction between SAP30 - NSs, and mSin3A - NSs in the context of Bortezomib treatment. This decrease in association between SAP30 - NSs also correlated with a decrease in the ubiquitination status of SAP30 with Bortezomib treatment. Bortezomib treatment, however, resulted in increased ubiquitination of mSin3A, suggesting that Bortezomib dynamically affects the ubiquitination status of host proteins that interact with NSs. Finally, we observed that expression of interferon beta (IFN-β) was increased in Bortezomib treated cells which indicated that the cellular antiviral mechanism was revived as a result of treatment and may contribute to control of viral multiplication. PMID:26001632

  12. Recent outbreaks of rift valley Fever in East Africa and the middle East.

    PubMed

    Himeidan, Yousif E; Kweka, Eliningaya J; Mahgoub, Mostafa M; El Rayah, El Amin; Ouma, Johnson O

    2014-01-01

    Rift Valley fever (RVF) is an important neglected, emerging, mosquito-borne disease with severe negative impact on human and animal health. Mosquitoes in the Aedes genus have been considered as the reservoir, as well as vectors, since their transovarially infected eggs withstand desiccation and larvae hatch when in contact with water. However, different mosquito species serve as epizootic/epidemic vectors of RVF, creating a complex epidemiologic pattern in East Africa. The recent RVF outbreaks in Somalia (2006-2007), Kenya (2006-2007), Tanzania (2007), and Sudan (2007-2008) showed extension to districts, which were not involved before. These outbreaks also demonstrated the changing epidemiology of the disease from being originally associated with livestock, to a seemingly highly virulent form infecting humans and causing considerably high-fatality rates. The amount of rainfall is considered to be the main factor initiating RVF outbreaks. The interaction between rainfall and local environment, i.e., type of soil, livestock, and human determine the space-time clustering of RVF outbreaks. Contact with animals or their products was the most dominant risk factor to transfer the infection to humans. Uncontrolled movement of livestock during an outbreak is responsible for introducing RVF to new areas. For example, the virus that caused the Saudi Arabia outbreak in 2000 was found to be the same strain that caused the 1997-98 outbreaks in East Africa. A strategy that involves active surveillance with effective case management and diagnosis for humans and identifying target areas for animal vaccination, restriction on animal movements outside the affected areas, identifying breeding sites, and targeted intensive mosquito control programs has been shown to succeed in limiting the effect of RVF outbreak and curb the spread of the disease from the onset. PMID:25340047

  13. Evidence of rift valley fever seroprevalence in the Sahrawi semi-nomadic pastoralist system, Western Sahara

    PubMed Central

    2014-01-01

    Background The increasing global importance of Rift Valley fever (RVF) is clearly demonstrated by its geographical expansion. The presence of a wide range of host and vector species, and the epidemiological characteristics of RVF, have led to concerns that epidemics will continue to occur in previously unaffected regions of Africa. The proximity of the Sahrawi territories of Western Sahara to endemic countries, such as Mauritania, Senegal, and Mali with periodic isolation of virus and serological evidence of RVF, and the intensive livestock trade in the region results in a serious risk of RVF spread in the Sahrawi territories, and potentially from there to the Maghreb and beyond. A sero-epidemiological survey was conducted in the Saharawi territories between March and April 2008 to investigate the possible presence of the RVF virus (RVFV) and associated risk factors. A two-stage cluster sampling design was used, incorporating 23 sampling sites. Results A total of 982 serum samples was collected from 461 sheep, 463 goats and 58 camels. Eleven samples (0.97%) tested positive for IgG against the RVFV. There were clusters of high seroprevalence located mostly in the Tifariti (7.69%) and Mehaires (7.14%) regions, with the Tifariti event having been found in one single flock (4/26 positive animals). Goats and older animals were at a significantly increased risk being seropositive (p = 0.007 and p = 0.007, respectively). Conclusion The results suggest potential RVF activity in the study area, where intense livestock movement and trade with neighbouring countries might be considered as a primary determinant in the spread of the disease. The importance of a continuous field investigation is reinforced, in light of the risk of RVF expansion to historically unaffected regions of Africa. PMID:24758592

  14. Breaking the chain: Rift Valley fever virus control via livestock vaccination.

    PubMed

    Bird, Brian H; Nichol, Stuart T

    2012-06-01

    Rift Valley fever virus is a mosquito-borne pathogen of livestock and humans that causes widespread and devastating outbreaks of severe and often fatal disease throughout Africa and portions of the Arabian Peninsula. Outbreaks can involve tens to hundreds of thousands of human cases, and millions of livestock. The severity of the disease varies by species, but in sheep and cattle 'abortion storms', high neonatal (∼70%), and adult mortality (20-30%) are features. Human cases are generally self-limiting, but severe complications such as hepatitis, retinitis, delayed-onset encephalitis, or a hemorrhagic syndrome with a case fatality of 10-20% can occur. There are no commercially available human vaccines. Livestock provide key ecological links between the Aedes sp. mosquito vector and humans. High viremias in livestock lead to spillover of RVFV into other anthrophillic vectors (Culex and Anopheles sp. mosquitoes), and, importantly, close contact with infected animal tissues and fluids or aborted fetal materials from these animals is a major risk factor for severe and lethal human infections. Vaccination programs targeting livestock during non-epidemic periods or as an early countermeasure against nascent outbreaks could therefore eliminate one of the main sources of human infection and limit the overall scope of epidemics. To this end, research groups have recently reported novel next generation RVFV vaccines that are safe for use in pregnant and young animals. Preventing RVFV infection of livestock by vaccination is a key element in breaking the chain of human epidemics, and could lead to control of this significant public health threat. PMID:22463980

  15. Streptomyces alkaliphilus sp. nov., isolated from sediments of Lake Elmenteita in the Kenyan Rift Valley.

    PubMed

    Akhwale, Juliah Khayeli; Göker, Markus; Rohde, Manfred; Spröer, Cathrin; Schumann, Peter; Klenk, Hans-Peter; Boga, Hamadi Iddi

    2015-05-01

    A novel strain, designated No. 7(T), was isolated from a sediment sample collected from the alkaline, saline Lake Elmenteita located in the Kenyan Rift Valley. The optimal growth for the strain was found to be at temperature 30-35 °C, at pH 8.0-12.0 in the presence of 7.0-10.0 % (w/v) NaCl. The strain was observed to form a light green beige abundant aerial mycelium on Horikoshi 1 agar and to have morphological and chemotaxonomic characteristics typical of members of the genus Streptomyces. The peptidoglycan was found to contain LL-diaminopimelic acid as the diamino acid, with no diagnostic sugars identified. The predominant menaquinone was identified as MK-9(H6). The main polar lipids were identified as diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol and an unknown phospholipid. Cellular fatty acids were found to consist of saturated branched-chain acids with iso-C(15:0), anteiso-C(15:0), iso-C(16:0) and anteiso-C(17:0) acids predominating. The type strain had a genomic DNA G+C content of 72.8 mol% and formed a distinct phyletic line within the genus Streptomyces. Based on the chemotaxonomic results, 16S rRNA gene sequence analysis and the low DNA-DNA hybridization value with the type strain of Streptomyces calidiresistens, it is proposed that strain No. 7(T) (= DSM 42118 = CECT 8549) represents a novel species, Streptomyces alkaliphilus. The INSDC accession number for the 16S rRNA gene sequence of strain No. 7(T) is KF976730. PMID:25761860

  16. Perceived risk factors and risk pathways of Rift Valley fever in cattle in Ijara district, Kenya.

    PubMed

    Owange, Nelson O; Ogara, William O; Kasiiti, Jacqueline; Gathura, Peter B; Okuthe, Sam; Sang, Rosemary; Affognon, Hippolyte; Onyango-Ouma, Washington; Landmann, Tobias T O; Mbabu, Murithi

    2014-01-01

    Ijara district in Kenya was one of the hotspots of Rift Valley fever (RVF) during the 2006/2007 outbreak, which led to human and animal deaths causing major economic losses. The main constraint for the control and prevention of RVF is inadequate knowledge of the risk factors for its occurrence and maintenance. This study was aimed at understanding the perceived risk factors and risk pathways of RVF in cattle in Ijara to enable the development of improved community-based disease surveillance, prediction, control and prevention. A cross-sectional study was carried out from September 2012 to June 2013. Thirty-one key informant interviews were conducted with relevant stakeholders to determine the local pastoralists' understanding of risk factors and risk pathways of RVF in cattle in Ijara district. All the key informants perceived the presence of high numbers of mosquitoes and large numbers of cattle to be the most important risk factors contributing to the occurrence of RVF in cattle in Ijara. Key informants classified high rainfall as the most important (12/31) to an important (19/31) risk factor. The main risk pathways were infected mosquitoes that bite cattle whilst grazing and at watering points as well as close contact between domestic animals and wildlife. The likelihood of contamination of the environment as a result of poor handling of carcasses and aborted foetuses during RVF outbreaks was not considered an important pathway. There is therefore a need to conduct regular participatory community awareness sessions on handling of animal carcasses in terms of preparedness, prevention and control of any possible RVF epizootics. Additionally, monitoring of environmental conditions to detect enhanced rainfall and flooding should be prioritised for preparedness. PMID:25686079

  17. Rift Valley Fever in Humans and Animals in Mayotte, an Endemic Situation?

    PubMed Central

    Jego, Maël; Desprès, Philippe; Collet, Louis; Zumbo, Betty; Tillard, Emmanuel; Girard, Sébastien; Filleul, Laurent

    2013-01-01

    Retrospective studies and surveillance on humans and animals revealed that Rift Valley Fever virus (RVFV) has been circulating on Mayotte for at least several years. A study was conducted in 2011 to estimate the seroprevalence of RVF in humans and in animals and to identify associated risk factors. Using a multistage cluster sampling method, 1420 individuals were enrolled in the human study, including 337 children aged 5 to 14 years. For the animal study, 198 seronegative ruminants from 33 randomly selected sentinel ruminant herds were followed up for more than one year. In both studies, information on environment and risk factors was collected through a standardized questionnaire. The overall weighted seroprevalence of RVFV antibodies in the general population aged ≥5 years was 3.5% (95% CI 2.6–4.8). The overall seroprevalence of RVFV antibodies in the ruminant population was 25.3% (95% CI 19.8–32.2). Age (≥15), gender (men), place of birth on the Comoros, living in Mayotte since less than 5 years, low educational level, farming and living close to a water source were significantly associated with RVFV seropositivity in humans. Major risk factors for RFV infection in animals were the proximity of the farm to a water point, previous two-month rainfall and absence of abortions disposal. Although resulting in few clinical cases in humans and in animals, RVFV has been circulating actively on the island of Mayotte, in a context of regular import of the virus from nearby countries through illegal animal movements, the presence of susceptible animals and a favorable environment for mosquito vectors to maintain virus transmission locally. Humans and animals share the same ways of RVFV transmission, with mosquitoes playing an important role. The studies emphasize the need for a one health approach in which humans and animals within their ecosystems are included. PMID:24098637

  18. Single-Molecule FISH Reveals Non-selective Packaging of Rift Valley Fever Virus Genome Segments

    PubMed Central

    Wichgers Schreur, Paul J.; Kortekaas, Jeroen

    2016-01-01

    The bunyavirus genome comprises a small (S), medium (M), and large (L) RNA segment of negative polarity. Although genome segmentation confers evolutionary advantages by enabling genome reassortment events with related viruses, genome segmentation also complicates genome replication and packaging. Accumulating evidence suggests that genomes of viruses with eight or more genome segments are incorporated into virions by highly selective processes. Remarkably, little is known about the genome packaging process of the tri-segmented bunyaviruses. Here, we evaluated, by single-molecule RNA fluorescence in situ hybridization (FISH), the intracellular spatio-temporal distribution and replication kinetics of the Rift Valley fever virus (RVFV) genome and determined the segment composition of mature virions. The results reveal that the RVFV genome segments start to replicate near the site of infection before spreading and replicating throughout the cytoplasm followed by translocation to the virion assembly site at the Golgi network. Despite the average intracellular S, M and L genome segments approached a 1:1:1 ratio, major differences in genome segment ratios were observed among cells. We also observed a significant amount of cells lacking evidence of M-segment replication. Analysis of two-segmented replicons and four-segmented viruses subsequently confirmed the previous notion that Golgi recruitment is mediated by the Gn glycoprotein. The absence of colocalization of the different segments in the cytoplasm and the successful rescue of a tri-segmented variant with a codon shuffled M-segment suggested that inter-segment interactions are unlikely to drive the copackaging of the different segments into a single virion. The latter was confirmed by direct visualization of RNPs inside mature virions which showed that the majority of virions lack one or more genome segments. Altogether, this study suggests that RVFV genome packaging is a non-selective process. PMID:27548280

  19. Rift Valley Fever Virus Strain MP-12 Enters Mammalian Host Cells via Caveola-Mediated Endocytosis

    PubMed Central

    Harmon, Brooke; Schudel, Benjamin R.; Maar, Dianna; Kozina, Carol; Ikegami, Tetsuro; Tseng, Chien-Te Kent

    2012-01-01

    Rift Valley fever virus (RVFV) is a zoonotic pathogen capable of causing serious morbidity and mortality in both humans and livestock. The lack of efficient countermeasure strategies, the potential for dispersion into new regions, and the pathogenesis in humans and livestock make RVFV a serious public health concern. The receptors, cellular factors, and entry pathways used by RVFV and other members of the family Bunyaviridae remain largely uncharacterized. Here we provide evidence that RVFV strain MP-12 uses dynamin-dependent caveola-mediated endocytosis for cell entry. Caveolae are lipid raft domains composed of caveolin (the main structural component), cholesterol, and sphingolipids. Caveola-mediated endocytosis is responsible for the uptake of a wide variety of host ligands, as well as bacteria, bacterial toxins, and a number of viruses. To determine the cellular entry mechanism of RVFV, we used small-molecule inhibitors, RNA interference (RNAi), and dominant negative (DN) protein expression to inhibit the major mammalian cell endocytic pathways. Inhibitors and RNAi specific for macropinocytosis and clathrin-mediated endocytosis had no effect on RVFV infection. In contrast, inhibitors of caveola-mediated endocytosis, and RNAi targeted to caveolin-1 and dynamin, drastically reduced RVFV infection in multiple cell lines. Expression of DN caveolin-1 also reduced RVFV infection significantly, while expression of DN EPS15, a protein required for the assembly of clathrin-coated pits, and DN PAK-1, an obligate mediator of macropinocytosis, had no significant impact on RVFV infection. These results together suggest that the primary mechanism of RVFV MP-12 uptake is dynamin-dependent, caveolin-1-mediated endocytosis. PMID:22993156

  20. Wetland sedimentation and associated diatoms in the Pleistocene Olorgesailie Basin, southern Kenya Rift Valley

    NASA Astrophysics Data System (ADS)

    Owen, R. Bernhart; Renaut, Robin W.; Scott, Jennifer J.; Potts, Richard; Behrensmeyer, Anna K.

    2009-12-01

    The Olorgesailie Basin in the southern Kenya Rift Valley contains a variety of lacustrine, wetland and terrestrial facies that were laid down during the last 1.2 million years. This study integrates diatom, ichnofossil, and rhizolith (silica and carbonate) evidence in order to identify and characterize shallow wetland deposition at the top (Member 14; ca. 493 ka) of the Olorgesailie Formation. A key feature of these deposits is the presence of facies with aquatic indicators (diatoms) that are overprinted by ichnofossils and rhizoliths that suggest drier conditions. Diatom floras include several fresh water Aulacoseira spp. and saline indicators such as Thalassiosirarudolfi, T.faurii, Cyclotellameneghiniana and Anomoeoneissphaerophora. The main indicators of shallow fresh to mildly saline waters include Epithemia argus, Rhopalodiagibberula, Encyonema muelleri, and Synedra spp. Three main suites of ichnofossils indicate varying water table depths during their formation. These consist of 1) horizontal tunnels that suggest saturated substrates; 2) vertical burrows formed in substrates with relatively lower water tables; and 3) termite, hymenopteran, and beetle ichnofossils that indicate dry substrates. Member 14 of the Olorgesailie Formation also contains carbonate and siliceous rhizoliths, which occur both together and separately. Four possible models are suggested to explain the silica and carbonate rhizolith formation: 1) a complex of spring-fed marshes and dry areas; 2) ephemeral wetlands and floodplains; 3) wetlands with abundant organic decay, and 4) initial carbonate rhizoliths that were replaced by silica. Preservation of cellular structures and the reworking and incorporation of rhizoliths in overlying younger strata suggest that they formed early during diagenesis.

  1. Evidence for Circulation of the Rift Valley Fever Virus among Livestock in the Union of Comoros

    PubMed Central

    Soulé, Miradje; Faharoudine, Abdourahime; Foray, Coralie; Olive, Marie-Marie; Maquart, Marianne; Soulaimane, Abdouroihamane; Madi Kassim, Ahmed; Cêtre-Sossah, Catherine; Cardinale, Eric

    2014-01-01

    Rift Valley fever virus (RVFV) is an arthropod-borne phlebovirus reported to be circulating in most parts of Africa. Since 2009, RVFV has been suspected of continuously circulating in the Union of Comoros. To estimate the incidence of RVFV antibody acquisition in the Comorian ruminant population, 191 young goats and cattle were selected in six distinct zones and sampled periodically from April 2010 to August 2011. We found an estimated incidence of RVFV antibody acquisition of 17.5% (95% confidence interval (CI): [8.9–26.1]) with a significant difference between islands (8.2% in Grande Comore, 72.3% in Moheli and 5.8% in Anjouan). Simultaneously, a longitudinal entomological survey was conducted and ruminant trade-related information was collected. No RVFV RNA was detected out of the 1,568 blood-sucking caught insects, including three potential vectors of RVFV mosquito species. Our trade survey suggests that there is a continuous flow of live animals from eastern Africa to the Union of Comoros and movements of ruminants between the three Comoro islands. Finally, a cross-sectional study was performed in August 2011 at the end of the follow-up. We found an estimated RVFV antibody prevalence of 19.3% (95% CI: [15.6%–23.0%]). Our findings suggest a complex RVFV epidemiological cycle in the Union of Comoros with probable inter-islands differences in RVFV circulation patterns. Moheli, and potentially Anjouan, appear to be acting as endemic reservoir of infection whereas RVFV persistence in Grande Comore could be correlated with trade in live animals with the eastern coast of Africa. More data are needed to estimate the real impact of the disease on human health and on the national economy. PMID:25078616

  2. Structure of the Rift Valley fever virus nucleocapsid protein reveals another architecture for RNA encapsidation

    SciTech Connect

    Raymond, Donald D.; Piper, Mary E.; Gerrard, Sonja R.; Smith, Janet L.

    2010-07-13

    Rift Valley fever virus (RVFV) is a negative-sense RNA virus (genus Phlebovirus, family Bunyaviridae) that infects livestock and humans and is endemic to sub-Saharan Africa. Like all negative-sense viruses, the segmented RNA genome of RVFV is encapsidated by a nucleocapsid protein (N). The 1.93-{angstrom} crystal structure of RVFV N and electron micrographs of ribonucleoprotein (RNP) reveal an encapsidated genome of substantially different organization than in other negative-sense RNA virus families. The RNP polymer, viewed in electron micrographs of both virus RNP and RNP reconstituted from purified N with a defined RNA, has an extended structure without helical symmetry. N-RNA species of {approx}100-kDa apparent molecular weight and heterogeneous composition were obtained by exhaustive ribonuclease treatment of virus RNP, by recombinant expression of N, and by reconstitution from purified N and an RNA oligomer. RNA-free N, obtained by denaturation and refolding, has a novel all-helical fold that is compact and well ordered at both the N and C termini. Unlike N of other negative-sense RNA viruses, RVFV N has no positively charged surface cleft for RNA binding and no protruding termini or loops to stabilize a defined N-RNA oligomer or RNP helix. A potential protein interaction site was identified in a conserved hydrophobic pocket. The nonhelical appearance of phlebovirus RNP, the heterogeneous {approx}100-kDa N-RNA multimer, and the N fold differ substantially from the RNP and N of other negative-sense RNA virus families and provide valuable insights into the structure of the encapsidated phlebovirus genome.

  3. Immunogenicity and efficacy of a chimpanzee adenovirus-vectored Rift Valley Fever vaccine in mice

    PubMed Central

    2013-01-01

    Background Rift Valley Fever (RVF) is a viral zoonosis that historically affects livestock production and human health in sub-Saharan Africa, though epizootics have also occurred in the Arabian Peninsula. Whilst an effective live-attenuated vaccine is available for livestock, there is currently no licensed human RVF vaccine. Replication-deficient chimpanzee adenovirus (ChAd) vectors are an ideal platform for development of a human RVF vaccine, given the low prevalence of neutralizing antibodies against them in the human population, and their excellent safety and immunogenicity profile in human clinical trials of vaccines against a wide range of pathogens. Methods Here, in BALB/c mice, we evaluated the immunogenicity and efficacy of a replication-deficient chimpanzee adenovirus vector, ChAdOx1, encoding the RVF virus envelope glycoproteins, Gn and Gc, which are targets of virus neutralizing antibodies. The ChAdOx1-GnGc vaccine was assessed in comparison to a replication-deficient human adenovirus type 5 vector encoding Gn and Gc (HAdV5-GnGc), a strategy previously shown to confer protective immunity against RVF in mice. Results A single immunization with either of the vaccines conferred protection against RVF virus challenge eight weeks post-immunization. Both vaccines elicited RVF virus neutralizing antibody and a robust CD8+ T cell response. Conclusions Together the results support further development of RVF vaccines based on replication-deficient adenovirus vectors, with ChAdOx1-GnGc being a potential candidate for use in future human clinical trials. PMID:24304565

  4. Single-Molecule FISH Reveals Non-selective Packaging of Rift Valley Fever Virus Genome Segments.

    PubMed

    Wichgers Schreur, Paul J; Kortekaas, Jeroen

    2016-08-01

    The bunyavirus genome comprises a small (S), medium (M), and large (L) RNA segment of negative polarity. Although genome segmentation confers evolutionary advantages by enabling genome reassortment events with related viruses, genome segmentation also complicates genome replication and packaging. Accumulating evidence suggests that genomes of viruses with eight or more genome segments are incorporated into virions by highly selective processes. Remarkably, little is known about the genome packaging process of the tri-segmented bunyaviruses. Here, we evaluated, by single-molecule RNA fluorescence in situ hybridization (FISH), the intracellular spatio-temporal distribution and replication kinetics of the Rift Valley fever virus (RVFV) genome and determined the segment composition of mature virions. The results reveal that the RVFV genome segments start to replicate near the site of infection before spreading and replicating throughout the cytoplasm followed by translocation to the virion assembly site at the Golgi network. Despite the average intracellular S, M and L genome segments approached a 1:1:1 ratio, major differences in genome segment ratios were observed among cells. We also observed a significant amount of cells lacking evidence of M-segment replication. Analysis of two-segmented replicons and four-segmented viruses subsequently confirmed the previous notion that Golgi recruitment is mediated by the Gn glycoprotein. The absence of colocalization of the different segments in the cytoplasm and the successful rescue of a tri-segmented variant with a codon shuffled M-segment suggested that inter-segment interactions are unlikely to drive the copackaging of the different segments into a single virion. The latter was confirmed by direct visualization of RNPs inside mature virions which showed that the majority of virions lack one or more genome segments. Altogether, this study suggests that RVFV genome packaging is a non-selective process. PMID:27548280

  5. Land-use and land-cover dynamics in the central rift valley of Ethiopia.

    PubMed

    Garedew, Efrem; Sandewall, Mats; Söderberg, Ulf; Campbell, Bruce M

    2009-10-01

    Understanding the complexity of land-use and land-cover (LULC) changes and their driving forces and impacts on human and environmental security is important for the planning of natural resource management and associated decision making. This study combines and compares participatory field point sampling (pfps) and remote sensing to explore local LULC dynamics. The study was conducted in two peasant associations located in the central Ethiopian Rift Valley, which is a dry-land mixed farming area exposed to rapid deforestation. From 1973-2006, the area of cropland doubled at the expense of woodland and wooded-grassland in both of the study sites. Major deforestation and forest degradation took place from 1973-1986; woodland cover declined from 40% to 9% in one of the study sites, while the other lost all of its original 54% woodland cover. Our study concludes that assessing LULC dynamics using a combination of remote sensing and pfps is a valuable approach. The two methods revealed similar LULC trends, while the pfps provided additional details on how farmers view the changes. This study documents dramatic trends in LULC over time, associated with rapid population growth, recurrent drought, rainfall variability and declining crop productivity. The alarming nature of these trends is reflected in a decrease in the livelihood security of local communities and in environmental degradation. Given these dry-land conditions, there are few opportunities to improve livelihoods and environmental security without external support. If negative changes are to be halted, action must be taken, including building asset bases, instituting family planning services, and creating opportunities outside these marginal environments. PMID:19688359

  6. Seroprevalence of Infections with Dengue, Rift Valley Fever and Chikungunya Viruses in Kenya, 2007

    PubMed Central

    Ochieng, Caroline; Ahenda, Petronella; Vittor, Amy Y.; Nyoka, Raymond; Gikunju, Stella; Wachira, Cyrus; Waiboci, Lilian; Umuro, Mamo; Kim, Andrea A.; Nderitu, Leonard; Juma, Bonventure; Montgomery, Joel M.; Breiman, Robert F.; Fields, Barry

    2015-01-01

    Arthropod-borne viruses are a major constituent of emerging infectious diseases worldwide, but limited data are available on the prevalence, distribution, and risk factors for transmission in Kenya and East Africa. In this study, we used 1,091 HIV-negative blood specimens from the 2007 Kenya AIDS Indicator Survey (KAIS 2007) to test for the presence of IgG antibodies to dengue virus (DENV), chikungunya virus (CHIKV) and Rift Valley fever virus (RVFV).The KAIS 2007 was a national population-based survey conducted by the Government of Kenya to provide comprehensive information needed to address the HIV/AIDS epidemic. Antibody testing for arboviruses was performed on stored blood specimens from KAIS 2007 through a two-step sandwich IgG ELISA using either commercially available kits or CDC-developed assays. Out of the 1,091 samples tested, 210 (19.2%) were positive for IgG antibodies against at least one of the three arboviruses. DENV was the most common of the three viruses tested (12.5% positive), followed by RVFV and CHIKV (4.5% and 0.97%, respectively). For DENV and RVFV, the participant’s province of residence was significantly associated (P≤.01) with seropositivity. Seroprevalence of DENV and RVFV increased with age, while there was no correlation between province of residence/age and seropositivity for CHIKV. Females had twelve times higher odds of exposure to CHIK as opposed to DENV and RVFV where both males and females had the same odds of exposure. Lack of education was significantly associated with a higher odds of previous infection with either DENV or RVFV (p <0.01). These data show that a number of people are at risk of arbovirus infections depending on their geographic location in Kenya and transmission of these pathogens is greater than previously appreciated. This poses a public health risk, especially for DENV. PMID:26177451

  7. A systematic review of Rift Valley Fever epidemiology 1931–2014

    PubMed Central

    Nanyingi, Mark O.; Munyua, Peninah; Kiama, Stephen G.; Muchemi, Gerald M.; Thumbi, Samuel M.; Bitek, Austine O.; Bett, Bernard; Muriithi, Reese M.; Njenga, M. Kariuki

    2015-01-01

    Background Rift Valley Fever (RVF) is a mosquito-borne viral zoonosis that was first isolated and characterized in 1931 in Kenya. RVF outbreaks have resulted in significant losses through human illness and deaths, high livestock abortions and deaths. This report provides an overview on epidemiology of RVF including ecology, molecular diversity spatiotemporal analysis, and predictive risk modeling. Methodology Using the Preferred Reporting Items for Systematic reviews and Meta-Analyses (PRISMA) guidelines, we systematically searched for relevant RVF publications in repositories of the World Health Organization Library and Information Networks for Knowledge (WHOLIS), U.S Centers for Disease Control and Prevention (CDC), and Food and Agricultural Organization (FAO). Detailed searches were performed in Google Scholar, SpringerLink, and PubMed databases and included conference proceedings and books published from 1931 up to 31st January 2015. Results and discussion A total of 84 studies were included in this review; majority (50%) reported on common human and animal risk factors that included consumption of animal products, contact with infected animals and residing in low altitude areas associated with favorable climatic and ecological conditions for vector emergence. A total of 14 (16%) of the publications described RVF progressive spatial and temporal distribution and the use of risk modeling for timely prediction of imminent outbreaks. Using distribution maps, we illustrated the gradual spread and geographical extent of disease; we also estimated the disease burden using aggregate human mortalities and cumulative outbreak periods for endemic regions. Conclusion This review outlines common risk factors for RVF infections over wider geographical areas; it also emphasizes the role of spatial models in predicting RVF enzootics. It, therefore, explains RVF epidemiological status that may be used for design of targeted surveillance and control programs in endemic

  8. Recent Outbreaks of Rift Valley Fever in East Africa and the Middle East

    PubMed Central

    Himeidan, Yousif E.; Kweka, Eliningaya J.; Mahgoub, Mostafa M.; El Rayah, El Amin; Ouma, Johnson O.

    2014-01-01

    Rift Valley fever (RVF) is an important neglected, emerging, mosquito-borne disease with severe negative impact on human and animal health. Mosquitoes in the Aedes genus have been considered as the reservoir, as well as vectors, since their transovarially infected eggs withstand desiccation and larvae hatch when in contact with water. However, different mosquito species serve as epizootic/epidemic vectors of RVF, creating a complex epidemiologic pattern in East Africa. The recent RVF outbreaks in Somalia (2006–2007), Kenya (2006–2007), Tanzania (2007), and Sudan (2007–2008) showed extension to districts, which were not involved before. These outbreaks also demonstrated the changing epidemiology of the disease from being originally associated with livestock, to a seemingly highly virulent form infecting humans and causing considerably high-fatality rates. The amount of rainfall is considered to be the main factor initiating RVF outbreaks. The interaction between rainfall and local environment, i.e., type of soil, livestock, and human determine the space-time clustering of RVF outbreaks. Contact with animals or their products was the most dominant risk factor to transfer the infection to humans. Uncontrolled movement of livestock during an outbreak is responsible for introducing RVF to new areas. For example, the virus that caused the Saudi Arabia outbreak in 2000 was found to be the same strain that caused the 1997–98 outbreaks in East Africa. A strategy that involves active surveillance with effective case management and diagnosis for humans and identifying target areas for animal vaccination, restriction on animal movements outside the affected areas, identifying breeding sites, and targeted intensive mosquito control programs has been shown to succeed in limiting the effect of RVF outbreak and curb the spread of the disease from the onset. PMID:25340047

  9. Modelling the Effects of Seasonality and Socioeconomic Impact on the Transmission of Rift Valley Fever Virus

    PubMed Central

    Xiao, Yanyu; Beier, John C.; Cantrell, Robert Stephen; Cosner, Chris; DeAngelis, Donald L.; Ruan, Shigui

    2015-01-01

    Rift Valley fever (RVF) is an important mosquito-borne viral zoonosis in Africa and the Middle East that causes human deaths and significant economic losses due to huge incidences of death and abortion among infected livestock. Outbreaks of RVF are sporadic and associated with both seasonal and socioeconomic effects. Here we propose an almost periodic three-patch model to investigate the transmission dynamics of RVF virus (RVFV) among ruminants with spatial movements. Our findings indicate that, in Northeastern Africa, human activities, including those associated with the Eid al Adha feast, along with a combination of climatic factors such as rainfall level and hydrological variations, contribute to the transmission and dispersal of the disease pathogen. Moreover, sporadic outbreaks may occur when the two events occur together: 1) abundant livestock are recruited into areas at risk from RVF due to the demand for the religious festival and 2) abundant numbers of mosquitoes emerge. These two factors have been shown to have impacts on the severity of RVF outbreaks. Our numerical results present the transmission dynamics of the disease pathogen over both short and long periods of time, particularly during the festival time. Further, we investigate the impact on patterns of disease outbreaks in each patch brought by festival- and seasonal-driven factors, such as the number of livestock imported daily, the animal transportation speed from patch to patch, and the death rate induced by ceremonial sacrifices. In addition, our simulations show that when the time for festival preparation starts earlier than usual, the risk of massive disease outbreaks rises, particularly in patch 3 (the place where the religious ceremony will be held). PMID:25569474

  10. Comparison of Rift Valley fever virus replication in North American livestock and wildlife cell lines

    PubMed Central

    Gaudreault, Natasha N.; Indran, Sabarish V.; Bryant, P. K.; Richt, Juergen A.; Wilson, William C.

    2015-01-01

    Rift Valley fever virus (RVFV) causes disease outbreaks across Africa and the Arabian Peninsula, resulting in high morbidity and mortality among young domestic livestock, frequent abortions in pregnant animals, and potentially severe or fatal disease in humans. The possibility of RVFV spreading to the United States or other countries worldwide is of significant concern to animal and public health, livestock production, and trade. The mechanism for persistence of RVFV during inter-epidemic periods may be through mosquito transovarial transmission and/or by means of a wildlife reservoir. Field investigations in endemic areas and previous in vivo studies have demonstrated that RVFV can infect a wide range of animals, including indigenous wild ruminants of Africa. Yet no predominant wildlife reservoir has been identified, and gaps in our knowledge of RVFV permissive hosts still remain. In North America, domestic goats, sheep, and cattle are susceptible hosts for RVFV and several competent vectors exist. Wild ruminants such as deer might serve as a virus reservoir and given their abundance, wide distribution, and overlap with livestock farms and human populated areas could represent an important risk factor. The objective of this study was to assess a variety of cell lines derived from North American livestock and wildlife for susceptibility and permissiveness to RVFV. Results of this study suggest that RVFV could potentially replicate in native deer species such as white-tailed deer, and possibly a wide range of non-ruminant animals. This work serves to guide and support future animal model studies and risk model assessment regarding this high-consequence zoonotic pathogen. PMID:26175725

  11. A Glycoprotein Subunit Vaccine Elicits a Strong Rift Valley Fever Virus Neutralizing Antibody Response in Sheep

    PubMed Central

    Lebedev, Maxim; McVey, D. Scott; Wilson, William; Morozov, Igor; Young, Alan

    2014-01-01

    Abstract Rift Valley fever virus (RVFV), a member of the Bunyaviridae family, is a mosquito-borne zoonotic pathogen that causes serious morbidity and mortality in livestock and humans. The recent spread of the virus beyond its traditional endemic boundaries in Africa to the Arabian Peninsula coupled with the presence of susceptible vectors in nonendemic countries has created increased interest in RVF vaccines. Subunit vaccines composed of specific virus proteins expressed in eukaryotic or prokaryotic expression systems are shown to elicit neutralizing antibodies in susceptible hosts. RVFV structural proteins, amino-terminus glycoprotein (Gn), and carboxyl-terminus glycoprotein (Gc), were expressed using a recombinant baculovirus expression system. The recombinant proteins were reconstituted as a GnGc subunit vaccine formulation and evaluated for immunogenicity in a target species, sheep. Six sheep were each immunized with a primary dose of 50 μg of each vaccine immunogen with the adjuvant montanide ISA25; at day 21, postvaccination, each animal received a second dose of the same vaccine. The vaccine induced a strong antibody response in all animals as determined by indirect enzyme-linked immunosorbent assay (ELISA). A plaque reduction neutralization test (PRNT80) showed the primary dose of the vaccine was sufficient to elicit potentially protective virus neutralizing antibody titers ranging from 40 to 160, and the second vaccine dose boosted the titer to more than 1280. Furthermore, all animals tested positive for neutralizing antibodies at day 328 postvaccination. ELISA analysis using the recombinant nucleocapsid protein as a negative marker antigen indicated that the vaccine candidate is DIVA (differentiating infected from vaccinated animals) compatible and represents a promising vaccine platform for RVFV infection in susceptible species. PMID:25325319

  12. Spatial variability of mountain stream dynamics along the Ethiopian Rift Valley escarpment

    NASA Astrophysics Data System (ADS)

    Asfaha, Tesfaalem-Ghebreyohannes; Frankl, Amaury; Zenebe, Amanuel; Haile, Mitiku; Nyssen, Jan

    2014-05-01

    Changes in hydrogeomorphic characteristics of mountain streams are generally deemed to be controlled mainly by land use/cover changes and rainfall variability. This study investigates the spatial variability of peak discharge in relation to land cover, rainfall and topographic variables in eleven catchments of the Ethiopian Rift Valley escarpment (average slope gradient = 48% (± 13%). Rapid deforestation of the escarpment in the second half of the 20th century resulted in the occurrence of strong flash floods, transporting large amounts of discharge and sediment to the lower graben bottom. Due to integrated reforestation interventions as of the 1980s, many of these catchments do show improvement in vegetation cover at various degrees. Daily rainfall was measured using seven non-recording rain gauges, while peak stage discharges were measured after floods using crest stage gauges installed at eleven stream reaches. Peak discharges were calculated using the Manning's equation. Daily area-weighted rainfall was computed for each catchment using the Thiessen Polygon method. To estimate the vegetation cover of each catchment, the Normalized Difference Vegetation Index was calculated from Landsat TM imagery (mean = 0.14 ± 0.05). In the rainy season of 2012, there was a positive correlation between daily rainfall and peak discharge in each of the monitored catchments. In a multiple linear regression analysis (R² = 0.83; P<0.01), average daily peak discharge in all rivers was positively related with rainfall depth and catchment size and negatively with vegetation cover (as represented by average NDVI values). Average slope gradient of the catchments and Gravelius's compactness index did not show a statistically significant relation with peak discharge. This study shows that though the average vegetation cover of the catchments is still relatively low, differences in vegetation cover, together with rainfall variability plays a determining role in the amount of peak

  13. Differential opening of the Central and South Atlantic Oceans and the opening of the West African rift system

    NASA Astrophysics Data System (ADS)

    Fairhead, J. D.; Binks, R. M.

    1991-02-01

    Plate tectonic studies of the development of the Central and South Atlantic Oceans using Seasat and Geosat altimeter and magnetic anomaly isochron data now provide quantitative models of seafloor spreading through time. Such models enable an initial assessment of the differential opening between these two oceanic basins to be determined. The Equatorial Atlantic is an integral part of this oceanic rifting process, allowing stresses arising from the differential opening to be dissipated into both the Caribbean and Africa along its northern and southern boundaries respectively. The tectonic model for the West African rift system, based on geological and geophysical studies, shows a series of strike-slip fault zones diverging into Africa from the Gulf of Guinea and dissipating their shear movement into the development of extensional basins orientated perpendicular to these faults zones. The development of the West African rift system was contemporaneous with the early opening of the South Atlantic, continued to develop well after the final breakup of South America from Africa and did not cease until the late Cretaceous when there was a major phase of basin inversion and deformation. Santonian ( ~ 80 Ma) deformation across the Benue Trough (Nigeria) is broadly contemporaneous with dextral shear reactivation of the central African fracture system which, in turn resulted in renewed extension in the Sudan basins during the late Cretaceous and early Tertiary. This paper illustrates the close linkage in both time and space between the history of the African rift basins and the opening of the Atlantic. Both exhibit distinct phases of evolution with the rift basins developing in direct response to the differential opening between the Central and South Atlantic in order to dissipate stresses generated by this opening. The Mesozoic tectonic model proposed is therefore one of an intimate interaction between oceanic and continental tectonics.

  14. Shaded Relief with Height as Color, Virunga and Nyiragongo Volcanoes and the East African Rift

    NASA Technical Reports Server (NTRS)

    2002-01-01

    Volcanic, tectonic, erosional and sedimentary landforms are all evident in this comparison of two elevation models of a region along the East African Rift at Lake Kivu. The area shown covers parts of Congo, Rwanda and Uganda.

    These two images show exactly the same area. The image on the left was created using the best global topographic data set previously available, the U.S. Geological Survey's GTOPO30. In contrast, the much more detailed image on the right was generated with data from the Shuttle Radar Topography Mission, which collected enough measurements to map 80 percent of Earth's landmass at this level of precision. Elevation is color coded, progressing from green at the lower elevations through yellow to brown at the higher elevations. A false sun in the northwest (upper left) creates topographic shading.

    Lake Kivu is shown as black in the Shuttle Radar Topography Mission version (southwest corner). It lies within the East African Rift, an elongated tectonic pull-apart depression in Earth's crust. The rift extends to the northeast as a smooth lava- and sediment-filled trough. Two volcanic complexes are seen in the rift. The one closer to the lake is the Nyiragongo volcano, which erupted in January 2002, sending lava toward the lake shore and through the city of Goma. East of the rift, even more volcanoes are seen. These are the Virunga volcano chain, which is the home of the endangered mountain gorillas. Note that the terrain surrounding the volcanoes is much smoother than the eroding mountains that cover most of this view, such that topography alone is a good indicator of the extent of the lava flows. But this clear only at the higher spatial resolution of the shuttle mission's data set.

    For some parts of the globe, Shuttle Radar Topography Mission measurements are 30 times more precise than previously available topographical information, according to NASA scientists. Mission data will be a welcome resource for national and local governments

  15. Natural resources and their prospects in the closed basins of rift valley marginal grabens in northern Ethiopia

    NASA Astrophysics Data System (ADS)

    Meaza, Hailemariam; Frankl, Amaury; Poesen, Jean; Zenebe, Amanuel; Deckers, Jozef; Vaneetvelde, Veerle; Lanckriet, Sil; Nyssen, Jan

    2016-04-01

    With increasing population, producing more food and fibers has led to an expansion of the area under cultivation. For this, much attention is given to low-lying flat areas in search of suitable agricultural lands. The objectives of this paper are therefore: (1) to review the opportunities and challenges of natural resources in the marginal grabens for rural development; (2) to highlight the knowledge gaps and priorities in research and development in the marginal grabens, and (3) to supplement the literature review through repeat transect walks, focus group discussions and interviews across the western rift valley of northern Ethiopia. The paper shows that marginal grabens along the rift valleys are rich both in blue and green water resources due to their topographical and geological characteristics. Spate irrigation has been a growing water management practice to respond to soil moisture deficit. Besides, marginal grabens are fertile plains as a result of alluvial deposition that could be suitable for agricultural development. However, rainfall variability and groundwater withdrawal lead to graben basin closure and salinization. Notably, riverbed incisions and sediment deposition affects drainage systems and water supply in the marginal grabens. As a result, socioeconomic and natural capital of the marginal graben farmers are continuously threatened. Thus, the benefits of natural resources for rural development in the marginal grabens along the rift valley can be optimized if the current bottlenecks are converted into opportunities. A better understanding of the complex marginal graben system via a robust land evaluation framework will improve livelihoods of the communities that live in the (closed) marginal grabens. Keywords: population pressure, marginal grabens, endorheic lakes, salinization, Ethiopia

  16. Evidence for hot Mississippi Valley-type brines in the Reelfoot Rift complex, south-central United States, in Late Pennsylvanian-Early Permian

    USGS Publications Warehouse

    Leach, D.L.; Apodaca, L.E.; Repetski, J.E.; Powell, J.W.; Rowan, E.L.

    1997-01-01

    Petrographic and fluid inclusion studies of sparry dolomite cement from Upper Cambrian to Lower Ordovician rocks and conodont thermal-alteration indices provide evidence that hot mississippi valley-type brines were once present in the Reelfoot Rift complex. The cathodoluminescent microstratigraphy of sparry dolomite cement in the Reelfoot Rift resembles that of sparry dolomite cement associated with widespread mississippi valley-type deposition in the Ozark region. If correlative cathodoluminescent zones in the sparry dolomite from the Ozark and Reelfoot Rift regions indicate broadly contemporaneous dolomite deposition, then the results show that the Ozark MVT-type hydrothermal system extended into the Reelfoot region and onto the western flank of the Nashville Dome. Independent evidence supports migration of MVT-type brines into the Ozark region from the Reelfoot Rift complex in late Paleozoic time.

  17. Structural controls on the spatial distribution and geochemical composition of volcanism in a continental rift zone; an example from Owens Valley, eastern California

    NASA Astrophysics Data System (ADS)

    Haproff, P. J.; Yin, A.

    2014-12-01

    Bimodal volcanism is common in continental rift zones. Structural controls to the emplacement and compositions of magmas, however, are not well understood. To address this issue, we examine the location, age, and geochemistry of active volcanic centers, and geometry and kinematics of rift-related faults across the active transtensional Owens Valley rift zone. Building on existing studies, we postulate that the spatial distribution and geochemical composition of volcanism are controlled by motion along rift-bounding fault systems. Along-strike variation in fault geometry and characteristics of active volcanism allow us to divide Owens Valley into three segments: southern, northern, and central. The southern segment of Owens Valley is a simple shear, asymmetric rift bounded to the west by the east-dipping Sierra Nevada frontal fault (SNFF). Active vents of Coso volcanic field are distributed along the eastern rift shoulder and characterized by the eruption of bimodal lavas. The SNFF within this segment is low-angle and penetrates through the lithosphere and into the ductile asthenosphere, allowing for mantle-derived magma to migrate across the weakest part of the fault zone beneath the eastern rift shoulder. Magma thermally weakens wall rocks and eventually stalls in the crust where the melt develops a greater felsic component prior to eruption. The northern segment of Owens Valley displays similar structural geometry, as the west-dipping White Mountains fault (WMF) is listric at depth and offsets the crust and mantle lithosphere, allowing for vertical transport of magma and reservoir emplacement within the crust. Bimodal lavas periodically erupted in the Long Valley Caldera region along the western rift shoulder. The central segment of Owens Valley is a pure shear, symmetric graben generated by motion along the SNFF and WMF. The subvertical, right-slip Owens Valley fault (OVF) strikes along the axis of the valley and penetrates through the lithosphere into the

  18. Rift Valley fever virus (family Bunyaviridae, genus Phlebovirus). Isolations from Diptera collected during an inter-epizootic period in Kenya.

    PubMed Central

    Linthicum, K. J.; Davies, F. G.; Kairo, A.; Bailey, C. L.

    1985-01-01

    A total of 134 876 Diptera collected in Kenya during a 3-year period were tested in 3383 pools for Rift Valley fever (RVF) virus. Nineteen pools of unengorged mosquitoes were found positive for RVF. All isolations were made from specimens collected at or near the naturally or artificially flooded grassland depressions that serve as the developmental sites for the immature stages of many mosquito species. The isolation of virus from adult male and female A. lineatopennis which had been reared from field-collected larvae and pupae suggests that transovarial transmission of the virus occurs in this species. PMID:2862206

  19. Reverse genetics technology for Rift Valley fever virus: current and future applications for the development of therapeutics and vaccines.

    PubMed

    Bouloy, Michele; Flick, Ramon

    2009-11-01

    The advent of reverse genetics technology has revolutionized the study of RNA viruses, making it possible to manipulate their genomes and evaluate the effects of these changes on their biology and pathogenesis. The fundamental insights gleaned from reverse genetics-based studies over the last several years provide a new momentum for the development of designed therapies for the control and prevention of these viral pathogens. This review summarizes the successes and stumbling blocks in the development of reverse genetics technologies for Rift Valley fever virus and their application to the further dissection of its pathogenesis and the design of new therapeutics and safe and effective vaccines. PMID:19682499

  20. Mixing models and ionic geothermometers applied to warm (up to 60°C) springs: Jordan Rift Valley, Israel

    USGS Publications Warehouse

    Mazor, E.; Levitte, D.; Truesdell, A.H.; Healy, J.; Nissenbaum, A.

    1980-01-01

    No indications are available for the existence of above-boiling geothermal systems in the Jordan Rift Valley. Slightly higher than observed temperatures are concluded for a deep component at the springs of Hammat Gader (67°C), Gofra (68°C), the Russian Garden (40°C), and the Yesha well (53–65°C). These temperatures may encourage further developments for spas and bathing installations and, to a limited extent, for space heating, but are not favorable for geothermal power generation.

  1. Multiple mantle upwellings beneath the Northern East-African Rift System from relative P- and S-wave traveltime tomography

    NASA Astrophysics Data System (ADS)

    Civiero, Chiara; Hammond, James; Goes, Saskia; Fishwick, Stewart; Ahmed, Abdulhakim; Ayele, Atalay; Doubre, Cecile; Goitom, Berhe; Keir, Derek; Kendall, Mike; Leroy, Sylvie; Ogubazghi, Ghebrebrhan; Rumpker, Georg; Stuart, Graham

    2015-04-01

    Mantle plumes have been invoked as the likely cause of East African Rift volcanism and extension. However, the nature of mantle upwelling is debated, with proposed configurations ranging from a single broad plume, the African Superplume, connected to the LLSVP beneath Southern Africa, to one or more distinct lower-mantle sources along the rift. We present a new relative travel-time tomography model that images detailed P- and S- wave velocities from P,S and SKS phases below the northern East-African, Red Sea and Gulf of Aden rift. Data comes from stations that cover the area from Tanzania to Saudi Arabia. The aperture of the integrated dataset allows us to image for the first time structures of ~100 km length scale down to depths of 900 km beneath this region. Our images provide evidence of at least two low-velocity structures with a diameter of ~200 km that continue through the transition zone and into the lower mantle: the first extends to at least 900 km beneath Afar, and a second reaching at least 750 km depth just west of the Main Ethiopian Rift, a region with off-rift volcanism. Taking into account seismic sensitivity to temperature and thermally controlled phase boundary topography, we interpret these features as multiple focused upwellings from below the transition zone with excess temperatures of 100±50 K. The scale of the upwellings is smaller than any of the previously proposed lower mantle plume sources. This suggests the ponding or flow of deep-plume material below the transition zone may be spawning smaller upper-mantle upwellings.

  2. The Environmental Settings of Homo-Sapience Dispersal and the Neolithic Revolution in the Dead Sea - Red Sea Rift Valley

    NASA Astrophysics Data System (ADS)

    Stein, M.

    2014-12-01

    The Dead Sea-Red Sea Rift accommodated climatic and historic events that have fundamentally influenced the evolution of hominids. Among these developments, the Homo-Sapience (HS) dispersal "out of Africa" and the "Neolithic Revolution (NR)" represent major benchmarks. These developments occurred during the last interglacial and the post-glacial periods when the Red Sea - Levant region was overall arid. Nevertheless, wetter intervals prevailed within these arid periods, allowed the human culture development. The information on these wetter periods is stored in the sedimentary archives that were formed in the Rift. Lake Lisan that expanded all over the Dead Sea- Jordan- Kinnarot basin during the last glacial period retreated and contracted when the ice receded at the northern latitudes. At ~ 14-13 ka BP the lake dropped abruptly and deposited thick sequences of halite. Subsequently, terra rossa soil was re-mobilized from the Judea Mountains and accumulated along the Jordan Valley comprising the Fazael Fm. This soil and the availability of water in the Jordan Valley allow the establishment of the early agriculture settlements of Jericho, Gilgal and Fazael (at ~10-9 ka BP, the "peak" of sapropel S1, when enhance flow of Nile waters arrived to the Mediterranean). During the last interglacial HS dispersal occurs along the Red Sea- Jordan Valley corridor. Evidence for periods of wetness in this rather hyperarid region comes from fringing coral reefs along the Red Sea- Gulf of Aqaba shores, speleothems and travertines in the southern Negev desert -Arava valley and from lake sediments that were recently drilled at the deepest floor of the Dead Sea. All inventories indicate interval of enhanced wetness at ~ 128-122 ka BP, when sapropel S5 occurred. Thus, it appears that the periods of sapropels S1 and S5 were favorite for human culture development along the Red Sea - Jordan rift valley. Nevertheless, these human-development periods terminated abruptly at ~118-116 ka BP and

  3. Discovery of sublacustrine hydrothermal activity and associated massive sulfides and hydrocarbons in the north Tanganyika trough, East African Rift

    NASA Astrophysics Data System (ADS)

    Tiercelin, Jean-Jacques; Thouin, Catherine; Kalala, Tchibangu; Mondeguer, André

    1989-11-01

    Massive sulfides and carbonate mineral deposits associated with sublacustrine thermal springs were recently discovered along the Zaire side of the north Tanganyika trough, western branch of the East African Rift. This hydrothermal activity, investigated by scuba diving at a maximum depth of 20 m, is located at the intersection of major north-south normal faults and northwest-southeast faults belonging to the Tanganyika-Rukwa-Malawi (TRM) strike-slip fault zone. The preliminary results presented here come from analyses of sulfide deposits, hydrothermal fluids, and associated hydrocarbons that result from geothermal activity in this part of the East African Rift filled by a thick pile of sediment, the north Tanganyika trough.

  4. Estimation of Earthquake Source Properties Along the East African Rift Using Full Waveforms

    NASA Astrophysics Data System (ADS)

    Baker, B.; Roecker, S. W.

    2015-12-01

    Recently, the Continental Rifting in Africa: Fluids-Tectonic Interaction (CRAFTI) experiment was conducted in northern Tanzania and southern Kenya as a means to better evaluate the effect of tectonic and magmatic strain along the east African rift. Towards this goal S. Roecker has computed a 3D structural model by joint inversion of gravity, local seismic body wave, and surface wave data. The joint inversion in turn produces a quality estimate of the compressional, shear, and density structure in the region. In the process of tomography of local body wave data it was observed that there exist some anomalously deep seismic events. To better quantify these events we look towards waveform modeling in this new and laterally heterogeneous structural model. It is thought that better quantification of later arriving direct and scattered phases will provide better resolved estimates of the event locations and lower the trade-off between source time and depth uncertainty inherent in travel time inversions. Since our main objective is testing the validity of seismic depths in the travel time inversion we will favor a grid search based approach around the current hypocenters using a method similar Zhao, 2006. To expedite processing, we make use of seismic reciprocity and save the strain wave fields produced by impulsive sources at receiver locations in the vicinity of the initial hypocenters. We then perform a moment tensor inversion at each location around the hypocenter, estimate the corresponding source time function, compute the resulting synthetics, and finally calculate a cumulative waveform misfit objective function for all stations. It is thought this procedure should well sample the objective function in the neighborhood of the initial hypocenters and thereby provide an avenue for resolution analysis of the event depths.

  5. Bridging dry spells for maize cropping through supplemental irrigation in the Central Rift Valley of Ethiopia

    NASA Astrophysics Data System (ADS)

    Muluneh Bitew, Alemayehu; Keesstra, Saskia; Stroosnijder, Leo

    2015-04-01

    Maize yield in the Central Rift Valley of Ethiopia (CRV) suffers from dry spells at sensitive growth stages. Risk of crop failure makes farmers reluctant to invest in fertilizer. This makes the CRV food insecure. There are farms with well-maintained terraces and Rain Water Harvesting (RWH) systems using concrete farms ponds. We tested the hypothesis that in these farms supplemental irrigation with simultaneous crop intensification might boost production of a small maize area sufficient to improve food security. Intensification includes a higher plant density of a hybrid variety under optimum fertilization. First we assessed the probability of occurrence of dry spells. Then we estimated the availability of sufficient runoff in the ponds in dry years. During 2012 (dry) and 2013 (wet) on-farm field research was conducted with 10 combinations of supplemental irrigation and plant density. The simplest was rainfed farming with 30,000 plants ha-1. The most advanced was no water stress and 75,000 plants ha-1. Finally we compared our on-farm yield with that of neighbouring farmers. Because 2013 was a wet year no irrigation was needed. Our long term daily rainfall (1970-2011) analysis proves the occurrence of dry spells during the onset of the maize (Belg months March and April). In March there is hardly enough water in the ponds. So, we advise later sowing. Starting from April available water (runoff from a 2.2 ha catchment) matches crop water requirement (for 0.5 ha maize). Significant differences between grain and total biomass yield were observed between rainfed and other irrigation levels. However, since the largest difference is only 12%, the investment in irrigation non-critical drought years is not worth the effort. There was also a limited effect (18-22%) of increasing plant density. So, we advise not to use more than 45,000 plants ha-1. The grain yield and total biomass difference between farmers own practice and our on-farm research was 101% and 84% respectively

  6. Factors Associated with Severe Human Rift Valley Fever in Sangailu, Garissa County, Kenya

    PubMed Central

    LaBeaud, A. Desirée; Pfeil, Sarah; Muiruri, Samuel; Dahir, Saidi; Sutherland, Laura J.; Traylor, Zachary; Gildengorin, Ginny; Muchiri, Eric M.; Morrill, John; Peters, C. J.; Hise, Amy G.; Kazura, James W; King, Charles H.

    2015-01-01

    Background Mosquito-borne Rift Valley fever virus (RVFV) causes acute, often severe, disease in livestock and humans. To determine the exposure factors and range of symptoms associated with human RVF, we performed a population-based cross-sectional survey in six villages across a 40 km transect in northeastern Kenya. Methodology/Principal Findings: A systematic survey of the total populations of six Northeastern Kenyan villages was performed. Among 1082 residents tested via anti-RVFV IgG ELISA, seroprevalence was 15% (CI95%, 13–17%). Prevalence did not vary significantly among villages. Subject age was a significant factor, with 31% (154/498) of adults seropositive vs. only 2% of children ≤15 years (12/583). Seroprevalence was higher among men (18%) than women (13%). Factors associated with seropositivity included a history of animal exposure, non-focal fever symptoms, symptoms related to meningoencephalitis, and eye symptoms. Using cluster analysis in RVFV positive participants, a more severe symptom phenotype was empirically defined as having somatic symptoms of acute fever plus eye symptoms, and possibly one or more meningoencephalitic or hemorrhagic symptoms. Associated with this more severe disease phenotype were older age, village, recent illness, and loss of a family member during the last outbreak. In multivariate analysis, sheltering livestock (aOR = 3.5 CI95% 0.93–13.61, P = 0.065), disposing of livestock abortus (aOR = 4.11, CI95% 0.63–26.79, P = 0.14), and village location (P = 0.009) were independently associated with the severe disease phenotype. Conclusions/Significance Our results demonstrate that a significant proportion of the population in northeastern Kenya has been infected with RVFV. Village and certain animal husbandry activities were associated with more severe disease. Older age, male gender, herder occupation, killing and butchering livestock, and poor visual acuity were useful markers for increased RVFV infection. Formal vision

  7. Immunogenicity of a Recombinant Rift Valley Fever MP-12-NSm Deletion Vaccine Candidate in Calves

    PubMed Central

    Morrill, John C.; Laughlin, Richard C.; Lokugamage, Nandadeva; Wu, Jing; Pugh, Roberta; Kanani, Pooja; Adams, L. Garry; Makino, Shinji; Peters, C. J.

    2013-01-01

    The safety and immunogenicity of an authentic recombinant (ar) of the live, attenuated MP-12 Rift Valley fever (RVF) vaccine virus with a large deletion of the NSm gene in the pre-Gn region of the M RNA segment (arMP-12ΔNSm21/384) was tested in 4 – 6 month old Bos taurus calves. Phase I of this study evaluated the neutralizing antibody response, measured by 80% plaque reduction neutralization (PRNT80), and clinical response of calves to doses of 1×101 through 1×107 plaque forming units (PFU) administered subcutaneously (s.c.). Phase II evaluated the clinical and neutralizing antibody response of calves inoculated s.c. or intramuscularly (i.m.) with 1×103, 1×104 or 1×105 PFU of arMP-12ΔNSm21/384. No significant adverse clinical events were observed in the animals in these studies. Of all specimens tested, only one vaccine viral isolate was recovered and that virus retained the introduced deletion. In the Phase I study, there was no statistically significant difference in the PRNT80 response between the dosage groups though the difference in IgG response between the 1×101 PFU group and the 1×105 PFU group was statistically significant (p <0.05). The PRNT80 response of the respective dosage groups corresponded to dose of vaccine with the 1×101 PFU dose group showing the least response. The Phase II study also showed no statistically significant difference in PRNT80 response between the dosage groups though the difference in RVFV-specific IgG values was significantly increased (P<0.001) in animals inoculated i.m. with 1×104 or 1×105 PFU versus those inoculated s. c. with 1×103 or 1×105 PFU. Although the study groups were small, these data suggest that 1×104 or 1×105 PFU of arMP-12ΔNSm21/384 administered i.m. to calves will consistently stimulate a presumably protective PRNT80 response for at least 91 days post inoculation. Further studies of arMP-12ΔNSm21/384 are warranted to explore its suitability as an efficacious livestock vaccine. PMID:23994375

  8. Trace element mobility and transfer to vegetation within the Ethiopian Rift Valley lake areas.

    PubMed

    Kassaye, Yetneberk A; Skipperud, Lindis; Meland, Sondre; Dadebo, Elias; Einset, John; Salbu, Brit

    2012-10-26

    To evaluate critical trace element loads in native vegetation and calculate soil-to-plant transfer factors (TFs), 11 trace elements (Cr, Co, Ni, Cu, Zn, As, Se, Mo, Cd, Pb and Mn) have been determined in leaves of 9 taxonomically verified naturally growing terrestrial plant species as well as in soil samples collected around 3 Ethiopian Rift Valley lakes (Koka, Ziway and Awassa). The Cr concentration in leaves of all the plant species was higher than the "normal" range, with the highest level (8.4 mg per kg dw) being observed in Acacia tortilis from the Lake Koka area. Caper species (Capparis fascicularis) and Ethiopian dogstooth grass (Cynodon aethiopicus) from Koka also contained exceptionally high levels of Cd (1 mg per kg dw) and Mo (32.8 mg per kg dw), respectively. Pb, As and Cu concentrations were low in the plant leaves from all sites. The low Cu level in important fodder plant species (Cynodon aethiopicus, Acacia tortilis and Opuntia ficus-indicus) implies potential deficiency in grazing and browsing animals. Compared to the Canadian environmental quality guideline and maximum allowable concentration in agricultural soils, the total soil trace element concentrations at the studied sites are safe for agricultural crop production. Enrichment factor was high for Zn in soils around Lakes Ziway and Awassa, resulting in moderate to high transfer of Zn to the studied plants. A six step sequential extraction procedure on the soils revealed a relatively high mobility of Cd, Se and Mn. Strong association of most trace elements with the redox sensitive fraction and mineral lattice was also confirmed by partial redundancy analysis. TF (mg per kg dw plants/mg per kg dw soil) values based on the total (TF(total)) and mobile fractions (TF(mobile)) of soil trace element concentrations varied widely among elements and plant species, with the averaged TF(total) and TF(mobile) values ranging from 0.01-2 and 1-60, respectively. Considering the mobile fraction in soils should

  9. Occurrence of rift valley fever in cattle in Ijara district, Kenya.

    PubMed

    Owange, Nelson O; Ogara, William O; Affognon, Hippolyte; Peter, Gathura B; Kasiiti, Jacqueline; Okuthe, Sam; Onyango-Ouma, W; Landmann, Tobias; Sang, Rosemary; Mbabu, Murithi

    2014-11-01

    Ijara district in Kenya was one of the hotspots of rift valley fever (RVF) during the 2006/2007 outbreak which led to human and animal deaths causing huge economic and public health losses. The main constraint in the control and prevention of RVF is inadequate knowledge on its occurrence during the interepidemic period. This study was aimed at understanding the occurrence of RVF in cattle in Ijara to enable the development of improved community-based disease surveillance, prediction, control and prevention. Six herds each 700-1000 cattle were identified with participatory involvement of locals and project technical team of the project. One animal per herd was tagged with global position system (GPS) collar to enable follow up. Sero-surveys were conducted periodically to understand the herd's movement through various ecological zones and risk of exposure to RVF virus. Sixty animals less than 3 years old from each herd were randomly selected each sampling time and sero-surveyed for RVF four times (September 2012, December 2012, February 2013 and May 2013) during the study period and along the nomadic movement route. The serum samples collected were subjected to RVF inhibition ELISA test to detect if there was exposure for RVF virus (RVFV). The RVF inhibition ELISA positive samples were subjected to IgM ELISA test to determine if the exposures were current or recent (within 14 days). The result of the survey indicated that 13.1% (183/1396) of cattle sero-surveyed had RVFV antibodies by inhibition ELISA test while 1.4% (18/1396) was positive for IgM ELISA test. The highest RVFV circulation was detected after herds pass through bony forest between Lamu and Ijara and Halei forested areas. These forested areas also had the highest IgM detections. The findings indicate that even limited rainfall was able to initiate RVFV circulation in Ijara region with highest circulation detected within forested areas with potential to become epidemic if rains persist with extensive

  10. Two diamictites, two cap carbonates, two δ13C excursions, two rifts: The Neoproterozoic Kingston Peak Formation, Death Valley, California

    NASA Astrophysics Data System (ADS)

    Prave, A. R.

    1999-04-01

    Stratigraphic mapping of the Neoproterozoic glaciogenic Kingston Peak Formation (Death Valley, California) provides evidence for two temporally discrete extensional deformation episodes. These episodes are bracketed by the Sourdough Limestone and Noonday Dolomite, the facies characteristics and δ13C data (ranging between 2.15 and -2.56‰ and -1.88 and -4.86‰, respectively) of which make them equivalent to Sturtian and Varangian age cap carbonates, respectively. This constrains the two extensional episodes along the southwestern margin of Laurentia to ca. 700 Ma and ca. 600 Ma. These observations and data show that the field evidence for mid-Neoproterozoic breakup and the predictions from tectonic subsidence curves for a latest Neoproterozoic breakup are both correct. Thus, Neoproterozoic plate reconstructions must account for two discrete rift episodes separated by 100 m.y. or more. Confining rifting to within the Kingston Peak Formation thereby places the younger Proterozoic rocks of the southwestern Great Basin in the rift to drift tectonic phase.

  11. Aluto-Langano geothermal field, Ethiopian Rift Valley: Physical characteristics and the effects of gas on well performance

    SciTech Connect

    Gizaw, B. )

    1993-04-01

    This study, which focuses on the Aluto-Langano geothermal field, is part of the ongoing investigation of the geothermal systems in the Ethiopian Rift Valley. Aluto-Langano is a water-dominated gas-rich geothermal field, with a maximum temperature close to 360[degree]C, in the Lakes District region of the Ethiopian Rift Valley. The upflow zone for the system lies along a deep, young NNE trending fault and is characterized by boiling. As a result, the deep upflow zone loses some water as steam and produces a cooler saline shallow aquifer. The high partial pressure of carbon dioxide (about 30 bar in the reservoir) depresses the water table and restricts boiling to deeper levels. The main aquifer for the systems is in the Tertiary ignimbrite, which lies below 1400 m. The capacity of the existing wells is close to 7 MW[sub c]: the energy potential of the area is estimated to be between 3000 and 6000 MW[sub t] yr/km[sup 3], or 10-20 MW[sub c]/km[sup 3] for over 30 years.

  12. Prevalence of contagious caprine pleuro-pneumonia in pastoral flocks of goats in the Rift Valley region of Kenya.

    PubMed

    Kipronoh, Alexander Kipruto; Ombui, Jackson Nyarongi; Kiara, Henry Kimathi; Binepal, Yatinder Singh; Gitonga, Eric; Wesonga, Hezron Okwako

    2016-01-01

    A cross-sectional survey was conducted between the months of March 2014 and March 2015 to determine the prevalence of contagious caprine pleuropneumonia in goat populations in pastoral flocks in three sub-counties of the Rift Valley region. A total of 432 serum samples were collected from goats from 54 flocks and tested for the presence of antibodies against mycoplasma capricolum subspecies capripneumoniae (mccp) using monoclonal antibody-based competitive enzyme-linked immuno-sorbent assay. Sero-prevalence recorded for Turkana West was 63.9%, Kajiado Central was 48.6%, while Pokot East was 29.2% which was statistically significant (χ2 = 34.997; P = 0.000) in the study sites. The results of this study confirmed that CCPP is widespread and endemic in the pastoral production systems studied in the Rift Valley region. The results confirmed that regions sharing international boundaries are at a higher risk of CCPP hence the need for a unified cross-border approach to disease control measures in the border areas. PMID:26516086

  13. Mixing models and ionic geothermometers applied to warm (up to 60°C) springs: Jordan Rift Valley, Israel

    NASA Astrophysics Data System (ADS)

    Mazor, E.; Levitte, D.; Truesdell, A. H.; Healy, J.; Nissenbaum, A.

    1980-01-01

    Mixing models and evaluation of SiO 2 contents of warm-water manifestations in the Jordan—Dead Sea Rift Valley indicate that these waters are fed by aquifers with estimated temperatures of up to 68°C. These calculations and Na/K ratios, concentrations of Na, K and Ca, concentrations of atmospheric Ne, Ar, Kr and Xe; and concentrations of the stable hydrogen and oxygen isotopes all indicate below-boiling temperatures. No indications are available for the existence of above-boiling geothermal systems in the Jordan Rift Valley. Slightly higher than observed temperatures are concluded for a deep component at the springs of Hammat Gader (67°C), Gofra (68°C), the Russian Garden (40°C), and the Yesha well (53-65°C). These temperatures may encourage further developments for spas and bathing installations and, to a limited extent, for space heating, but are not favorable for geothermal power generation.

  14. Development of an Upper Cambrian rimmed shelf along the Mississippi Valley Graben, Reelfoot Rift, and the southeastern Ozarks, southern Missouri

    SciTech Connect

    Palmer, J.R. . Dept. of Natural Resources)

    1993-03-01

    The paleogeographic distribution of intrashelf basin shales and limestones in the Bonneterre (Dresbachian) and Davis (Franconian) Formations, and associated data, suggests that rimmed shelf conditions separated the central Missouri part of the shelf from the Mississippi Valley Graben (MVG) of the Reelfoot Rift to the southeast. Middle Dresbachian rocks of the intrashelf basin area, predominantly limestones, indicate a discontinuous carbonate shelf rim. The succeeding widespread shales of the Franconian intrashelf basin indicate that a continuous rim had developed. The margin of the shelf rim is preserved in part of the 4,700-ft-thick Upper Cambrian succession along the northwest margin of the Mississippi Valley Graben (MVG) of the Reelfoot Rift. Equivalent rocks within the MVG are dominantly dark shales (1,600+ ft thick). The Amoco Spence test well penetrated the rim succession on the northwest margin of the MVG. At least 11 large-scale transgressive-regressive (T-R) carbonate cycles (120--600 ft thick) have been defined in this well; 7 cycles are equivalent to the Bonneterre and Davis Formations. These latter cycles have shaly limestone, or limestone at the base, and grade upward to dolostone or coarsely crystalline dolostone, which are interpreted to be shallowing-upward, bank margin-peritidal carbonates. Northwest of the rim margin and on the southeast side of the St. Francois Mountains, rocks equivalent to the rim succession consist of a series of ramp to platform cycles made up of dolostones and local limestones. Many carbonate shelves on passive margins are rimmed. The development of this Upper Cambrian rimmed shelf along the northwest margin of the MVG suggests that failed rifts can also localized such rims.

  15. Volcanic activities in the Southern part of East African rift initiation: Melilitites and nephelinites from the Manyara Basin (North Tanzania rift axis)

    NASA Astrophysics Data System (ADS)

    Baudouin, Celine; Parat, Fleurice; Tiberi, Christel; Gautier, Stéphanie; Peyrat, Sophie

    2016-04-01

    The East African Rift exposes different stages of plate boundary extension, from the initiation of the rift (North (N) Tanzania) to oceanic accretion (Afar). The N Tanzania rift-axis (north-south (S) trend) is divided into 2 different volcanic and seismic activities: (1) the Natron basin (N) with shallow seismicity and intense volcanism and (2) the Manyara basin (S) with deep crustal earthquakes and sparse volcanism. The Natron basin is characterized by extinct volcanoes (2 Ma-0.75 Ma) and active volcano (Oldoinyo Lengai) and a link between seismicity and volcanism has been observed during the Oldoinyo Lengai crisis in 2007. In the S part of the N Tanzanian rift, volcanoes erupted in the Manyara basin between 0.4 and 0.9 Ma. In this study, we used geochemical signature of magmas and deep fluids that percolate into the lithosphere beneath Manyara basin, to define the compositions of magmas and fluids at depth beneath the S part of the N Tanzania rift, compare to the Natron basin and place constrain on the volcanic and seismic activities. The Manyara basin has distinct volcanic activities with mafic magmas as melilitites (Labait) and Mg-nephelinites (carbonatite, Kwaraha), and more differentiated magmas as Mg-poor nephelinites (Hanang). Melilitites and Mg-nephelinites are primary magmas with olivine, clinopyroxene (cpx), and phlogopite recording high-pressure crystallization environment, (melilitites >4 GPa and Mg-nephelinites>1 GPa) with high volatile contents (whole rock: 0.7-4.6 wt% CO2, 0.1-0.3 wt% F and 0.1 wt% Cl). FTIR analyses of olivine constrained the water content of Labait and Kwaraha magmas at 0.1 and 0.4 wt% H2O, respectively. Geochemical modelling suggests that mafic magmas result from a low degree of partial melting (1-2%) of a peridotitic source with garnet and phlogopite (high Tb/Yb (>0.6) and Rb/Sr (0.03-0.12) ratio). Mg-poor nephelinites from Hanang volcano crystallized cpx, Ti-garnet, and nepheline as phenocrysts. Magmas result from fractional

  16. A temperature-limited assessment of the risk of Rift Valley fever transmission and establishment in the continental United States of America.

    PubMed

    Konrad, Sarah K; Miller, Scott N

    2012-05-01

    The rapid spread of West Nile virus across North America after its introduction in 1999 highlights the potential for foreign arboviruses to become established in the United States of America. Of particular concern is Rift Valley fever virus (RVFV), which has been responsible for multiple African epidemics resulting in death of both humans and livestock, as well as major economic disruption due to livestock loss and trade restrictions. Modern globalization, travel, and commerce allow viruses to easily jump from one continent to another; and it is likely only a matter of time before RVFV reaches North American shores. We used a degree-day model in combination with livestock population data and a pathways analysis to identify regions and times where RVFV is most likely to enter and become established in the United States of America. Transmission risk of the disease varies across the country from 325 annual risk days in parts of Florida to zero risk days in the far North and in high mountain regions. Areas of particular concern are where there are a high number of possible tranmission days, a large livestock population, and proximity to likely locations for the disease to enter the country via mosquito vector or human host. These areas should be monitored closely during transmission "risk seasons" so that if the virus does enter the country and begins to become established, it can be quickly controlled and eliminated before spreading further. Areas most at risk include the Baltimore and New York City metro areas as well as much of the region between these urban centers; most of Texas, especially around Houston; Florida; Atlanta; southwest Nebraska; southern California and Arizona; and the central valley of California. PMID:22639118

  17. Evaluation of efficacy, potential for vector transmission and duration of immunity testing of MP-12, an attenuated Rift Valley fever virus vaccine candidate, in sheep

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever virus (RVFV) causes serious disease in ruminants and humans in Africa. There are currently no fully licensed vaccines for this arthropod-borne virus in the US. Studies in sheep and cattle have found an attenuated strain of RVFV, MP-12, to be both safe and efficacious, and a conditi...

  18. RIFT VALLEY FEVER: PREPARING FOR POTENTIAL NEW MOSQUITO-BORNE DISEASES IN THE U.S. WITH A VECTOR SURVEILLANCE SYSTEM

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In this symposium we have discussed four diseases that are emerging threats in the U.S., and it may be concluded that in our best defense knowing the vector is as important as knowing the disease. Rift Valley fever, Dengue, and JEE are but a few of the many emerging diseases that we can prepare for...

  19. A Rift Valley Fever Risk Surveillance System in Africa Using Remotely Sensed Data in a GIS: Potential for Use on Other Continents

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF) is a mosquito-borne viral disease with pronounced health and economic impacts to domestic animals and humans in much of sub-Saharan Africa (1). The disease causes high mortality and abortion in domestic animals, and significant morbidity and mortality in humans. RVF epizootic...

  20. PREPARING FOR RIFT VALLEY FEVER IN THE U.S.: IMPLEMENTING GIS AND REMOTE SENSING TO UNDERSTAND POPULATION DYNAMICS OF MOSQUITO VECTORS

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Much work has been done to understand the pathways along which Rift Valley fever (RVF) could be introduced to the U.S., to study the vector competence and vectorial capacity of various mosquito species that could transmit RVF, and to develop safe vaccines and reliable test kits. However, we do not ...

  1. Development and evaluation of one-step rRT-PCR and immunohistochemical methods for detection of Rift Valley fever virus in biosafety level 2 diagnostic laboratories

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever virus (RVFV) is a zoonotic insect transmitted virus endemic to Africa and the Arabian Peninsula. Infection causes abortions and high mortality in newborn ruminants with an overall human infection rate of <1%. The potential of RVFV as a bioterrorism agent and/or being accidentally i...

  2. Blood Meal Analysis of and Virus Detection in Mosquitoes Collected during a Rift Valley fever Epizootic/Epidemic: Implications for epidemic disease transmission dynamics

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF) is a zoonosis of domestic ruminants in Africa. Bloodfed mosquitoes collected during the 2006-2007 RVF outbreak in Kenya were analyzed to determine the virus infection status and animal source of the bloodmeals. Bloodmeals from individual mosquito abdomens were screened for v...

  3. An automated GIS/remotely sensed early warning system to detect elevated populations of vectors of Rift Valley fever, a mosquito-borne emerging virus threat

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Mosquito transmitted infectious diseases, like eastern equine encephalitis (EEE), Rift Valley fever (RVF), and West Nile virus (WNV), pose an international threat to animal and human health. An introduction of RVF into the U.S. would severely impact wild ungulate populations and the beef and dairy ...

  4. Arabidopsis thaliana plants expressing Rift Valley fever virus antigens: Mice exhibit systemic immune responses as the result of oral administration of the transgenic plants.

    PubMed

    Kalbina, Irina; Lagerqvist, Nina; Moiane, Bélisario; Ahlm, Clas; Andersson, Sören; Strid, Åke; Falk, Kerstin I

    2016-11-01

    The zoonotic Rift Valley fever virus affects livestock and humans in Africa and on the Arabian Peninsula. The economic impact of this pathogen due to livestock losses, as well as its relevance to public health, underscores the importance of developing effective and easily distributed vaccines. Vaccines that can be delivered orally are of particular interest. Here, we report the expression in transformed plants (Arabidopsis thaliana) of Rift Valley fever virus antigens. The antigens used in this study were the N protein and a deletion mutant of the Gn glycoprotein. Transformed lines were analysed for specific mRNA and protein content by RT-PCR and Western blotting, respectively. Furthermore, the plant-expressed antigens were evaluated for their immunogenicity in mice fed the transgenic plants. After oral intake of fresh transgenic plant material, a proportion of the mice elicited specific IgG antibody responses, as compared to the control animals that were fed wild-type plants and of which none sero-converted. Thus, we show that transgenic plants can be readily used to express and produce Rift Valley Fever virus proteins, and that the plants are immunogenic when given orally to mice. These are promising findings and provide a basis for further studies on edible plant vaccines against the Rift Valley fever virus. PMID:27402440

  5. Complete Genome Sequence of Two Rift Valley Fever Virus Strains Isolated from Outbreaks in Saudi Arabia (2000) and Kenya (2006 to 2007).

    PubMed

    Shivanna, Vinay; McDowell, Chester; Wilson, William C; Richt, Juergen A

    2016-01-01

    The complete genome sequence, including the untranslated regions, of two Rift Valley fever virus (RVFV) strains isolated from mosquitoes that were collected from disease outbreaks in Saudi Arabia (2001) and Kenya (2006 to 2007) were sequenced using next-generation sequencing technology. PMID:27609913

  6. Common host-derived chemicals increase catches of disease-transmitting mosquitoes and can improve early warning systems for rift valley fever virus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF), a mosquito-borne zoonosis, is a major public health problem in sub-Saharan Africa. The emergence and re-emergence of the disease in the last 20 years especially in East Africa, poses a looming health threat which is likely to spread to beyond Africa. This threat is exacerbat...

  7. Rift Valley fever virus incorporates the 78kDa glycoprotein into virions matured in C6/36 2 mosquito cells

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever virus (RVFV), genus Phlebovirus, family Bunyaviridae is a zoonotic arthropod-borne virus able to transition between distant host species, causing potentially severe disease in humans and ruminants. Viral proteins are encoded by three genomic segments, with the medium M segment codi...

  8. A common mantle plume source beneath the entire East African Rift System revealed by coupled helium-neon systematics

    NASA Astrophysics Data System (ADS)

    Halldórsson, Sæmundur A.; Hilton, David R.; Scarsi, Paolo; Abebe, Tsegaye; Hopp, Jens

    2014-04-01

    We report combined He-Ne-Ar isotope data of mantle-derived xenoliths and/or lavas from all segments of the East Africa Rift System (EARS). Plume-like helium isotope (3He/4He) ratios (i.e., greater than the depleted MORB mantle (DMM) range of 8 ± 1RA) are restricted to the Ethiopia Rift and Rungwe, the southernmost volcanic province of the Western Rift. In contrast, neon isotope trends reveal the presence of an ubiquitous solar (plume-like) Ne component throughout the EARS, with (21Ne/22Ne)EX values (where (21Ne/22Ne)EX is the air-corrected 21Ne/22Ne ratio extrapolated to Ne-B) as low as 0.034, close to that of solar Ne-B (0.031). Coupling (21Ne/22Ne)EX with 4He/3He ratios indicates that all samples can be explained by admixture between a single mantle plume source, common to the entire rift, and either a DMM or subcontinental lithospheric mantle source. Additionally, we show that the entire sample suite is characterized by low 3He/22NeS ratios (mostly < 0.2)—a feature characteristic of oceanic hot spots such as Iceland. We propose that the origin of these unique noble gas signatures is the deeply rooted African Superplume which influences magmatism throughout eastern Africa. We argue that the Ethiopia and Kenya domes represent two different heads of this common mantle plume source.

  9. Using remote sensing, ecological niche modeling, and Geographic Information Systems for Rift Valley fever risk assessment in the United States

    NASA Astrophysics Data System (ADS)

    Tedrow, Christine Atkins

    The primary goal in this study was to explore remote sensing, ecological niche modeling, and Geographic Information Systems (GIS) as aids in predicting candidate Rift Valley fever (RVF) competent vector abundance and distribution in Virginia, and as means of estimating where risk of establishment in mosquitoes and risk of transmission to human populations would be greatest in Virginia. A second goal in this study was to determine whether the remotely-sensed Normalized Difference Vegetation Index (NDVI) can be used as a proxy variable of local conditions for the development of mosquitoes to predict mosquito species distribution and abundance in Virginia. As part of this study, a mosquito surveillance database was compiled to archive the historical patterns of mosquito species abundance in Virginia. In addition, linkages between mosquito density and local environmental and climatic patterns were spatially and temporally examined. The present study affirms the potential role of remote sensing imagery for species distribution prediction, and it demonstrates that ecological niche modeling is a valuable predictive tool to analyze the distributions of populations. The MaxEnt ecological niche modeling program was used to model predicted ranges for potential RVF competent vectors in Virginia. The MaxEnt model was shown to be robust, and the candidate RVF competent vector predicted distribution map is presented. The Normalized Difference Vegetation Index (NDVI) was found to be the most useful environmental-climatic variable to predict mosquito species distribution and abundance in Virginia. However, these results indicate that a more robust prediction is obtained by including other environmental-climatic factors correlated to mosquito densities (e.g., temperature, precipitation, elevation) with NDVI. The present study demonstrates that remote sensing and GIS can be used with ecological niche and risk modeling methods to estimate risk of virus establishment in mosquitoes and

  10. Ecological Succession, Land use Changes and Soil Organic C Stock in a Lake Retreat Area (Main Ethiopian Rift Valley)

    NASA Astrophysics Data System (ADS)

    Nyssen, J.; Temesgen, H.; Lemenih, M.; Zenebe, A.; Kindu, M.; Haile, M.

    2007-12-01

    In the Main Ethiopian Rift Valley, ecological succession is related to continuous lake retreat (Nyssen et al., 2004). Human activities, through their impact on land use and cover, affect this ecological succession. Through a remote sensing study, we extricated ecological succession and human activity as causative factors for land use and cover changes (LUCC) and explored which impact this has on soil organic C (SOC) stock in lake retreat areas. Remote sensing data used include a Landsat MSS from 1973, a Landsat TM from 1986 and a Landsat ETM+ from 2000. A conventional type of classification was used whereby supervised classification of the 2000 image was supplemented by unsupervised classification of the older datasets. Due to decreased rainfall and water abstraction for intense irrigated agriculture and floriculture in its catchment, Lake Abijata lost 46 % of its area between 2000 and 2006. On the emerged lands, a good ecological succession was observed between 1973 and 1986, with clear evidence for: emerged land -> grassland -> Acacia bushes -> open woodland. Between 1986 and 2000, LUCC tendencies were totally reversed and woody vegetation decreased strongly, indicating increased human impact (Habtamu et al., 2007). Based on an analysis of the Landsat imagery, coupled with soil and land use studies, determinants for SOC stock were found. Firstly, SOC stock significantly differs between cultivated land and grazing land (3301 and 2626 g m-2) on the one hand, and woodland (4594 g m-2) on the other. The strongest explanation of SOC stock is related to the duration of emergence and hence of pedogenesis. Its proxy, elevation, explains much of the variability of SOC (R2 = 0.48). Using a multiple regression model involving elevation and IR reflectance, the SOC stock in the study area could be assessed at 2196 (+ - 1517) g m-2 SOC in 2000, against 3222 (+ - 1639) g m-2 in 1973 (Nyssen et al., 2007), which is related to the post-1986 reversing of ecological succession in

  11. Giant seismites and megablock uplift in the East African Rift: Evidence for large magnitude Late Pleistocene earthquakes

    NASA Astrophysics Data System (ADS)

    Hilbert-Wolf, Hannah; Roberts, Eric

    2015-04-01

    Due to rapid population growth and urbanization of many parts of East Africa, it is increasingly important to quantify the risk and possible destruction from large-magnitude earthquakes along the tectonically active East African Rift System. However, because comprehensive instrumental seismic monitoring, historical records, and fault trench investigations are limited for this region, the sedimentary record provides important archives of seismicity in the form of preserved soft-sediment deformation features (seismites). Extensive, previously undescribed seismites of centimeter- to dekameter-scale were identified by our team in alluvial and lacustrine facies of the Late Quaternary-Recent Lake Beds Succession in the Rukwa Rift Basin, of the Western Branch of the East African Rift System. We document the most highly deformed sediments in shallow, subsurface strata close to the regional capital of Mbeya, Tanzania, primarily exposed at two, correlative outcrop localities ~35 km apart. This includes a remarkable, clastic 'megablock complex' that preserves remobilized sediment below vertically displaced breccia megablocks, some in excess of 20 m-wide. The megablock complex is comprised of (1) a 5m-tall by 20m-wide injected body of volcanic ash and silt that hydraulically displaced (2) an equally sized, semi-consolidated, volcaniclastic megablock; both of which are intruded by (3) a clastic injection dyke. Evidence for breaching at the surface and for the fluidization of cobbles demonstrates the susceptibility of the substrate in this region to significant deformation via seismicity. Thirty-five km to the north, dekameter-scale asymmetrical/recumbent folds occur in a 3 m-thick, flat lying lake floor unit of the Lake Beds Succession. In between and surrounding these two unique sites, smaller-scale seismites are expressed, including flame structures; cm- to m-scale folded beds; ball-and-pillow structures; syn-sedimentary faults; sand injection features; and m

  12. The influence of pre-existing structures on the evolution of the southern Kenya Rift Valley — evidence from seismic and gravity studies

    NASA Astrophysics Data System (ADS)

    Birt, C. S.; Maguire, P. K. H.; Khan, M. A.; Thybo, H.; Keller, G. R.; Patel, J.

    1997-09-01

    The Kenya Rift is an active continental rift that has developed since the Late Oligocene. Although a thermal origin for the rifting episode is indicated by the scale of volcanism and its relative timing with uplift and faulting, the influence of pre-existing lithospheric structural controls is poorly understood. The interpretation of a 430-km-long seismic refraction and gravity line across the southern part of the Kenya Rift shows that the rift is developed across a transition zone, thought to represent the sheared Proterozoic boundary between the Archaean Nyanza Craton and the mobile Mozambique Belt. This zone of weakness has been exploited by the recent thermal rifting event. The Moho is at a depth of 33 km beneath the Archaean craton in the western part of the profile, and 40 km beneath the Mozambique Belt in the east. A few kilometres of localised crustal thinning has developed across the transition from thin to thick crust. At the surface, brittle faulting has formed an asymmetric rift basin 3.6 km deep, filled with low-velocity volcanic rocks. Basement velocities show a transition across the same area from low velocities (6.0 km s -1) in the Archaean, to high velocities (6.35 km s -1) in the Proterozoic. Mid-crustal layers show no deformation that can be attributed to the rifting event. Poorly constrained upper mantle velocities of 7.8 km s -1 beneath the southern rift confirm the continuation of the axial low-velocity zone imaged in previous seismic experiments. This is interpreted as the effect of small degrees of partial melt caused by elevated mantle temperatures. Gravity modelling suggests a contribution to the Bouguer anomaly from below the Moho, invoking the need for deep density contrasts. The regional gravity gradient necessary to model the Bouguer anomaly is used as supporting evidence for mantle-plume type circulation beneath the uplifted East African Plateau to the west of the Kenya Rift.

  13. Seismic hazard assessment of the Kivu rift segment based on a new sismo-tectonic zonation model (Western Branch of the East African Rift system)

    NASA Astrophysics Data System (ADS)

    Havenith, Hans-Balder; Delvaux, Damien

    2015-04-01

    In the frame of the Belgian GeoRisCA multi-risk assessment project focused on the Kivu and Northern Tanganyika Region, a seismic hazard map has been produced for this area. It is based on a on a recently re-compiled catalogue using various local and global earthquake catalogues. The use of macroseismic epicenters determined from felt earthquakes allowed to extend the time-range back to the beginning of the 20th century, thus spanning about 100 years. The magnitudes have been homogenized to Mw and the coherence of the catalogue has been checked and validated. The seismo-tectonic zonation includes 10 seismic source areas that have been defined on the basis of the regional geological structure, neotectonic fault systems, basin architecture and distribution of earthquake epicenters. The seismic catalogue was filtered by removing obvious aftershocks and Gutenberg-Richter Laws were determined for each zone. On the basis of this seismo-tectonic information and existing attenuation laws that had been established by Twesigomwe (1997) and Mavonga et al. (2007) for this area, seismic hazard has been computed with the Crisis 2012 (Ordaz et al., 2012) software. The outputs of this assessment clearly show higher PGA values (for 475 years return period) along the Rift than the previous estimates by Twesigomwe (1997) and Mavonga (2007) while the same attenuation laws had been used. The main reason for these higher PGA values is likely to be related to the more detailed zonation of the Rift structure marked by a strong gradient of the seismicity from outside the rift zone to the inside. Mavonga, T. (2007). An estimate of the attenuation relationship for the strong ground motion in the Kivu Province, Western Rift Valley of Africa. Physics of the Earth and Planetary Interiors 62, 13-21. Ordaz M, Martinelli F, Aguilar A, Arboleda J, Meletti C, D'Amico V. (2012). CRISIS 2012, Program for computing seismic hazard. Instituto de Ingeniería, Universidad Nacional Autónoma de M

  14. New structural/tectonical model and its implication on hydrological thinking and groundwater management - the Lake Tiberias, Jordan Rift Valley

    NASA Astrophysics Data System (ADS)

    Inbar, Nimrod; Magri, Fabien; Yellin-Dror, Annat; Rosenthal, Eliahu; Möller, Peter; Siebert, Christian; Guttman, Josef

    2014-05-01

    Lake Tiberias is a fresh water lake located at the Kinneret basin which is approximately 30 km long and 10 km wide. It comprises a link in the chain of pull-apart basins that characterizes the structure of the conspicuous Jordan Rift Valley (JRV). The basin surface is about 200 m below mean sea level (msl) and basin-fill attains a thickness of up to 8 km. Until recently, studies focused mainly on the upper strata of basin fill. Consequently, a complete three dimensional geological model, including clear view of the tectonic framework at the Kinneret Basin was incomplete. This situation imposes great difficulty in understanding the local hydrological system and as consequence enforce constrains on groundwater management of the regional aquifers that flows towards the lake. A recently proposed structural/tectonical model (Inbar, 2012) enables revaluation of several geohydrological aspects at Sea of Galilee and its surroundings and a new hydrological model based on those findings aims to clarify those aspects with relation to groundwater management. The deep-seated stratigraphical units were seismically studied at the Kinnarot Valley (southern part of Kinneret basin) where sufficient information is available (Inbar, 2012). This study shows the subsidence and northwestward tilting of the basin floor (pre-rift formations) and the flow of thick Late Miocene salt accumulation accordingly. Furthermore, shallower seismic data, collected at the lake itself, shows a suspected salt dome close to the western boundary fault of the basin (Resnikov et al., 2004). Salt flow is now suggested to be a substantial factor in the tectonic play. At the lake surroundings there are several springs and boreholes where brine immerges from an estimated depth of about 2-3 kilometers. Significant differences in brine characteristics raised questions regarding the location of brine traps, flow mechanism and the mixture process between the fresh water and the brine. However, the effect of the

  15. Kinematics and dynamics of Nubia-Somalia divergence along the East African rift

    NASA Astrophysics Data System (ADS)

    Stamps, Dorothy Sarah

    Continental rifting is fundamental to the theory of plate tectonics, yet the force balance driving Earth's largest continental rift system, the East African Rift (EAR), remains debated. The EAR actively diverges the Nubian and Somalian plates spanning ˜5000 km N-S from the Red Sea to the Southwest Indian Ridge and ˜3000 km NW-SE from eastern Congo to eastern Madagascar. Previous studies suggest either lithospheric buoyancy forces or horizontal tractions dominate the force balance acting to rupture East Africa. In this work, we investigate the large-scale dynamics of Nubia-Somalia divergence along the EAR driving present-day kinematics. Because Africa is largely surrounded by spreading ridges, we assume plate-plate interactions are minimal and that the major driving forces are gradients in gravitational potential energy (GPE), which includes the effect of vertical mantle tractions, and horizontal basal tractions arising from viscous coupling to horizontal mantle flow. We quantify a continuous strain rate and velocity field based on kinematic models, an updated GPS velocity solution, and the style of earthquake focal mechanisms, which we use as an observational constraint on surface deformation. We solve the 3D force balance equations and calculate vertically averaged deviatoric stress for a 100 km thick lithosphere constrained by the CRUST2.0 crustal density and thickness model. By comparing vertically integrated deviatoric stress with integrated lithospheric strength we demonstrate forces arising from gradients in gravitational potential energy are insufficient to rupture strong lithosphere, hence weakening mechanisms are required to initiate continental rupture. The next step involves inverting for a stress field boundary condition that is the long-wavelength minimum energy deviatoric stress field required to best-fit the style of our continuous strain rate field in addition to deviatoric stress from gradients in GPE. We infer the stress field boundary condition

  16. The Lava sequence of the East African Rift escarpment in the Oldoinyo Lengai - Lake Natron sector, Tanzania

    NASA Astrophysics Data System (ADS)

    Neukirchen, Florian; Finkenbein, Thomas; Keller, Jörg

    2010-12-01

    maars of the "Younger Extrusives" on the rift valley floor surrounding Oldoinyo Lengai. Further, still younger alkaline tuffs are found on the top of the rift shoulder.

  17. An assessment of the regional and national socio-economic impacts of the 2007 Rift Valley fever outbreak in Kenya.

    PubMed

    Rich, Karl M; Wanyoike, Francis

    2010-08-01

    Although Rift Valley fever (RVF) has significant impacts on human health and livestock production, it can also induce significant (and often overlooked) economic losses among various stakeholders in the marketing chain. This work assesses and quantifies the multi-dimensional socio-economic impacts of the 2007 RVF outbreak in Kenya based on a rapid assessment of livestock value chains in the northeast part of the country and a national macroeconomic analysis. Although study results show negative impacts among producers in terms of food insecurity and reductions in income, we also found significant losses among other downstream actors in the value chain, including livestock traders, slaughterhouses, casual laborers, and butchers, as well as other, non-agricultural sectors. The study highlights the need for greater sensitivity and analyses that address the multitude of economic losses resulting from an animal disease to better inform policy and decision making during animal health emergencies. PMID:20682906

  18. Decision-support tool for prevention and control of Rift Valley fever epizootics in the Greater Horn of Africa.

    PubMed

    2010-08-01

    In East Africa, Rift Valley fever (RVF) usually occurs as explosive epizootics with prolonged inter-epidemic periods on the order of 8 to 10 years. The episodic nature of the disease and the rapid evolution of outbreaks create special challenges for its mitigation and control. Following the events of the 2006 and 2007 RVF outbreak in East Africa, decision-makers assembled their collective experiences in the form of a risk-based decision support tool to help guide responses in future emergencies. The premise of the tool is that a series of natural events are indicative of the increasing risk of an outbreak and that actions should be matched to this evolving risk profile. In this manner, investment in prevention and control can be qualitatively optimized. The decision support tool is a living document written through stakeholder input. This publication captures the current tool as an example of risk-based decision support. PMID:20682910

  19. Potential application of silver nanoparticles to control the infectivity of Rift Valley fever virus in vitro and in vivo.

    PubMed

    Borrego, Belén; Lorenzo, Gema; Mota-Morales, Josué D; Almanza-Reyes, Horacio; Mateos, Francisco; López-Gil, Elena; de la Losa, Nuria; Burmistrov, Vasily A; Pestryakov, Alexey N; Brun, Alejandro; Bogdanchikova, Nina

    2016-07-01

    In this work we have tested the potential antiviral activity of silver nanoparticles formulated as Argovit™ against Rift Valley fever virus (RVFV). The antiviral activity of Argovit was tested on Vero cell cultures and in type-I interferon receptor deficient mice (IFNAR (-/-) mice) by two different approaches: (i) different dilutions of Argovit were added to previously infected cells or administrated to animals infected with a lethal dose of virus; (ii) virus was pre-incubated with different dilutions of Argovit before inoculation in mice or cells. Though the ability of silver nanoparticles to control an ongoing RVFV infection in the conditions tested was limited, the incubation of virus with Argovit before the infection led to a reduction of the infectivity titers both in vitro and in vivo. These results reveal the potential application of silver nanoparticles to control the infectivity of RVFV, which is an important zoonotic pathogen. PMID:26970026

  20. Rift Valley fever dynamics in Senegal: a project for pro-active adaptation and improvement of livestock raising management.

    PubMed

    Lafaye, Murielle; Sall, Baba; Ndiaye, Youssou; Vignolles, Cecile; Tourre, Yves M; Borchi, Franc Ois; Soubeyroux, Jean-Michel; Diallo, Mawlouth; Dia, Ibrahima; Ba, Yamar; Faye, Abdoulaye; Ba, Taibou; Ka, Alioune; Ndione, Jacques-André; Gauthier, Hélène; Lacaux, Jean-Pierre

    2013-11-01

    The multi-disciplinary French project "Adaptation à la Fiévre de la Vallée du Rift" (AdaptFVR) has concluded a 10-year constructive interaction between many scientists/partners involved with the Rift Valley fever (RVF) dynamics in Senegal. The three targeted objectives reached were (i) to produce--in near real-time--validated risk maps for parked livestock exposed to RVF mosquitoes/vectors bites; (ii) to assess the impacts on RVF vectors from climate variability at different time-scales including climate change; and (iii) to isolate processes improving local livestock management and animal health. Based on these results, concrete, pro-active adaptive actions were taken on site, which led to the establishment of a RVF early warning system (RVFews). Bulletins were released in a timely fashion during the project, tested and validated in close collaboration with the local populations, i.e. the primary users. Among the strategic, adaptive methods developed, conducted and evaluated in terms of cost/benefit analyses are the larvicide campaigns and the coupled bio-mathematical (hydrological and entomological) model technologies, which are being transferred to the staff of the "Centre de Suivi Ecologique" (CSE) in Dakar during 2013. Based on the results from the AdaptFVR project, other projects with similar conceptual and modelling approaches are currently being implemented, e.g. for urban and rural malaria and dengue in the French Antilles. PMID:24258902

  1. Chimpanzee insectivory in the northern half of Uganda's Rift Valley: do Bulindi chimpanzees conform to a regional pattern?

    PubMed

    McLennan, Matthew R

    2014-04-01

    Insects are a nutritious food source for many primates. In chimpanzees, insectivory is most prevalent among communities that manufacture tools to harvest social insects, particularly ants and termites. In contrast to other long-term study sites, chimpanzees (Pan troglodytes schweinfurthii) in Budongo Forest and Kibale National Park, Uganda, rarely eat insects and have small foraging tool kits, supporting speculation that infrequent insectivory--technically aided or otherwise--characterises chimpanzees in this part of Uganda's Rift Valley. To expand the dataset for this region, insect foraging was investigated at Bulindi (25 km from Budongo) over 19 months during two studies in 2007-2008 and 2012-2013. Systematic faecal analysis demonstrated that insectivory is a habitual foraging activity at this site. Overall levels of insect consumption varied considerably across months but were not predicted by monthly changes in rainfall or fruit intake. Unlike their Budongo and Kibale counterparts, Bulindi chimpanzees often consume ants (principally weaver ants, Oecophylla longinoda) and use sticks to dig out stingless bee (Meliponini) ground nests. In other respects, however, insectivory at Bulindi conforms to the pattern observed elsewhere in this region: they do not manufacture 'fishing' or 'dipping' tools to harvest termites and aggressive or hard-to-access ants (e.g., army ants, Dorylus spp.), despite availability of suitable prey. The Bulindi data lend support to the supposition that chimpanzees in this part of the Rift Valley rarely exploit termites and Dorylus ants, apparently lacking the 'cultural knowledge' that would enable them to do so most efficiently (i.e., tool use). The study's findings contribute to current debates about the relative influence of genetics, environment and culture in shaping regional and local variability in Pan foraging ecology. PMID:24522970

  2. Culex pipiens, an Experimental Efficient Vector of West Nile and Rift Valley Fever Viruses in the Maghreb Region

    PubMed Central

    Amraoui, Fadila; Krida, Ghazi; Bouattour, Ali; Rhim, Adel; Daaboub, Jabeur; Harrat, Zoubir; Boubidi, Said-Chawki; Tijane, Mhamed; Sarih, Mhammed; Failloux, Anna-Bella

    2012-01-01

    West Nile fever (WNF) and Rift Valley fever (RVF) are emerging diseases causing epidemics outside their natural range of distribution. West Nile virus (WNV) circulates widely and harmlessly in the old world among birds as amplifying hosts, and horses and humans as accidental dead-end hosts. Rift Valley fever virus (RVFV) re-emerges periodically in Africa causing massive outbreaks. In the Maghreb, eco-climatic and entomologic conditions are favourable for WNV and RVFV emergence. Both viruses are transmitted by mosquitoes belonging to the Culex pipiens complex. We evaluated the ability of different populations of Cx. pipiens from North Africa to transmit WNV and the avirulent RVFV Clone 13 strain. Mosquitoes collected in Algeria, Morocco, and Tunisia during the summer 2010 were experimentally infected with WNV and RVFV Clone 13 strain at titers of 107.8 and 108.5 plaque forming units/mL, respectively. Disseminated infection and transmission rates were estimated 14–21 days following the exposure to the infectious blood-meal. We show that 14 days after exposure to WNV, all mosquito st developed a high disseminated infection and were able to excrete infectious saliva. However, only 69.2% of mosquito strains developed a disseminated infection with RVFV Clone 13 strain, and among them, 77.8% were able to deliver virus through saliva. Thus, Cx. pipiens from the Maghreb are efficient experimental vectors to transmit WNV and to a lesser extent, RVFV Clone 13 strain. The epidemiologic importance of our findings should be considered in the light of other parameters related to mosquito ecology and biology. PMID:22693557

  3. A study of Rift Valley fever virus in Morogoro and Arusha regions of Tanzania – serology and farmers’ perceptions

    PubMed Central

    Wensman, Jonas J.; Lindahl, Johanna; Wachtmeister, Nica; Torsson, Emeli; Gwakisa, Paul; Kasanga, Christopher; Misinzo, Gerald

    2015-01-01

    Introduction Rift Valley fever (RVF) is a zoonosis primarily affecting ruminants, resulting in epidemic abortions, fever, nasal and ocular discharges, haemorrhagic diarrhoea, and a high mortality rate among young animals. Rift Valley fever virus (RVFV) is an arthropod-borne RNA virus occurring in epizootic periods associated with heavy rainfall. The last outbreak of RVF in Tanzania was in 2006–2007, resulting in severe economic losses and impaired food security due to greater number of deaths of livestock. The aim of this study was to investigate the presence of antibodies against RVFV in sheep and goats in two different regions of Tanzania during an inter-epidemic period (IEP). In addition, the perception of important diseases among livestock keepers was assessed. Material and methods A cross-sectional serological survey was conducted in three purposively selected districts in Arusha and Morogoro regions of Tanzania. Serum samples from 354 sheep and goats were analysed in a commercial RVFV competitive ELISA. At the sampling missions, a questionnaire was used to estimate the socio-economic impact of infectious diseases. Results and discussion In total, 8.2% of the analysed samples were seropositive to RVF, and most seropositive animals were younger than 7 years, indicating a continuous circulation of RVFV in the two regions. None of the livestock keepers mentioned RVF as an important livestock disease. Conclusions This study confirms that RVFV is circulating at low levels in small ruminants during IEPs. In spite of recurring RVF outbreaks in Tanzania, livestock keepers seem to have a low awareness of the disease, making them poorly prepared and thus more vulnerable to future RVF outbreaks. PMID:26584830

  4. Ambient Noise Tomography of the East African Rift System in Mozambique

    NASA Astrophysics Data System (ADS)

    Domingues, A.; Chamussa, J.; Silveira, G. M.; Custodio, S.; Lebedev, S.; Chang, S.; Ferreira, A. M.; Fonseca, J. F.

    2013-12-01

    A wide range of studies has shown that the cross-correlation of ambient noise can provide an estimate of the Greens functions between pairs of stations. Project MOZART (funded by FCT, Lisbon, PI J. Fonseca) deployed 30 broadband (120s) seismic stations from the SEIS-UK Pool in Central Mozambique and NE South Africa, with the purpose of studying the East African Rift System (EARS) in Mozambique. We applied the Ambient Noise Tomography (ANT) method to broadband seismic data recorded from March 2011 until July 2012. Cross-correlations were computed between all pairs of stations, and from these we obtained Rayleigh wave group velocity dispersion curves for all interstation paths, in the period range from 3 to 50 seconds. We tested various approaches for pre-processing the ambient noise data regarding time-domain and spectral normalisation, as well as the use of phase cross-correlations. Moreover, we examined the robustness of our dispersion maps by splitting our dataset into various sub-sets of Green's functions with similar paths and by quantifying the differences between the dispersion maps obtained from the various sub-sets of data. We find that while the geographical distribution of the group velocity anomalies is well constrained, the amplitudes of the anomalies are slightly less robust. We performed a three-dimensional inversion to obtain the S-wave velocity of the crust and upper mantle. In addition, our preliminary results show a good correlation between the Rayleigh wave group velocity and the geology of Mozambique. In order to extend the investigation to longer periods and, thus, to be able to look into the lithosphere-asthenosphere depth range in the upper mantle, we apply a recent implementation of the surface-wave two-station method (teleseismic interferometry) and augment our dataset with Rayleigh wave phase velocities curves in broad period ranges.

  5. Miocene Onset of Extension in the Turkana Depression, Kenya: Implications for the Geodynamic Evolution of the East African Rift System

    NASA Astrophysics Data System (ADS)

    Boone, S.; Gleadow, A. J. W.; Kohn, B. P.; Seiler, C.

    2015-12-01

    The Paleogene-Recent East African Rift System (EARS) is the foremost modern example of continental rifting, providing much of our understanding of the early stages of continental breakup. The EARS traverses two regions of crustal uplift, the Ethiopian and East African Domes, separated by the Turkana Depression. This wide region of subdued topography coincides with the NW-SE trend of the Jurassic-Paleogene Anza Rift. Opinions on the fundamental geodynamic driver for EARS rifting are divided, however, principally between models involving migrating plume(s) and a single elongated 'superplume'. While competing models have similar topographic outcomes, they predict different morphotectonic evolutions for the Turkana Depression. Models inferring southward plume-migration imply that the plume must have passed below the Turkana Depression during the Paleogene, in order to have migrated to the East African Dome by the Miocene. The possible temporal denudational response to such plume activity is testable using low temperature thermochronology. We present apatite fission track (AFT) and (U-Th)/He (AHe), and zircon (U-Th)/He (ZHe) data from the Lapurr Range, an uplifted Precambrian basement block in northern Turkana. Low radiation damage ZHe results displaying an age range of ~70-210 Ma, and combined with stratigraphic evidence, suggest ~4-6 km of Jurassic-Early Cretaceous denudation, probably associated with early Anza Rift tectonism. AFT ages of ~9-15 Ma imply subsequent burial beneath no more than ~4 km of overburden, thus preserving the Jurassic-Cretaceous ZHe ages. Together with AFT results, AHe data (~3-19 Ma) support ~2-4 km of Miocene-Pliocene uplift of the Lapurr Range in the footwall of the E-dipping Lapurr normal fault. Miocene AFT and AHe ages are interpreted to reflect the initiation of the EARS in the Turkana Depression. If extension is associated with plume activity, then upwelling in the Turkana region is unlikely to have started prior to the Miocene, much

  6. A Review of New and Anticipated High-Resolution Paleoclimate Records from the East African Rift System and Their Implications for Hominin Evolution and Demography

    NASA Astrophysics Data System (ADS)

    Cohen, A. S.

    2014-12-01

    Our understanding of Late Tertiary/Quaternary climate and environmental history in East Africa has, to date, largely been based on outcrop and marine drill core records. Although these records have proven extremely valuable both in reconstructing environmental change and placing human evolution in an environmental context, their quality is limited by resolution, continuity, uncertainties about superposition and outcrop weathering. To address this problem, long drill core records from extant ancient lakes and lake beds are being collected by several research groups. Long cores (up to 100s of m.) from basin depocenters in both the western and eastern rifts are now available spanning nearly the entire latitudinal range of the East Africa Rift. This network of core records, especially when coupled with outcrop data, is providing an opportunity to compare the nature of important global climate transitions (especially glacial/interglacial events and precessional cycles) across the continent, thereby documenting regional heterogeneity in African climate history. Understanding this heterogeneity is critical for realistically evaluating competing hypotheses of environmental forcing of human evolution, and especially ideas about the dispersal of anatomically modern humans out of Africa in the early Late Pleistocene. In particular, understanding the hydrological and paleoecological history of biogeographic corridors linking eastern Africa, the Nile River Valley and the Levant is likely to be vastly improved through comparative analysis of these new drill cores over the next few years. Because we do not a priori know the primary forcing factors affecting this environmental history, it will essential to develop the best possible age models, employing multiple and novel geochronometric tools to make these comparisons.

  7. Transition from a localized to wide deformation along Eastern branch of Central East African Rift: Insights from 3D numerical models

    NASA Astrophysics Data System (ADS)

    Leroy, S. D.; Koptev, A.; Burov, E. B.; Calais, E.; Gerya, T.

    2015-12-01

    The Central East African Rift (CEAR) bifurcates in two branches (eastern, magma-rich and western, magma-poor) surrounding strong Tanzanian craton. Intensive magmatism and continental flood basalts are largely present in many of the eastern rift segments, but other segments, first of all the western branch, exhibit very small volcanic activity. The Eastern rift is characterized by southward progression of the onset of volcanism, the extensional features and topographic expression of the rift vary significantly north-southward: in northern Kenya the deformation is very wide (some 150-250 km in E-W direction), to the south the rift narrows to 60-70 km, yet further to the south the deformation widens again in the so-called Tanzania divergence zone. Widening of the Eastern branch within its southern part is associated with the impingement of the southward-propagating rift on the strong Masai block situated to east of the Tanzanian craton. To understand the mechanisms behind this complex deformation distribution, we implemented a 3Dl ultra-high resolution visco-plastic thermo-mechanical numerical model accounting for thermo-rheological structure of the lithosphere and hence captures essential features of the CEAR. The preferred model has a plume seeded slightly to the northeast of the craton center, consistent with seismic tomography, and produces surface strain distribution that is in good agreement with observed variation of deformation zone width along eastern side of Tanzanian craton: localized above bulk of mantle material deflected by cratonic keel narrow high strain zone (Kenia Rift) is replaced by wide distributed deformations within areas situated to north (northern Kenya, Turkana Rift) and to south (Tanzania divergence, Masai block) of it. These results demonstrate significant differences in the impact of the rheological profile on rifting style in case of dominant active rifting compared to dominant passive rifting. Narrow rifting, conventionally attributed to

  8. Catchment rehabilitation and hydro-geomorphic characteristics of mountain streams in the western Rift Valley escarpment of Northern Ethiopia

    NASA Astrophysics Data System (ADS)

    Ghebreyohannes Asfaha, Tesfaalem; Frankl, Amaury; Haile, Mitiku; Nyssen, Jan

    2013-04-01

    The catchments in the western Rift Valley escarpment of Northern Ethiopia are highly responsive in terms of hydro-geomorphic changes. With rapid deforestation in the first half of the 20th century, dense gully and scar networks developed, exporting huge amounts of runoff and sediment down to the fertile and densely populated Raya Valley. Consequently, threatening the environment and the livelihoods of the people both in the upstream and downstream areas. To reverse this problem, catchment-scale rehabilitation activities were initiated in the mid-1980s. In this study, we examine the hydro-geomorphic response of streams after catchment rehabilitation. Scar density was digitized from Google Earth imagery (2005) in 20 adjacent catchments and was explained in terms of its corresponding Normalized Difference Vegetation Index (NDVI) and slope gradient. This was accompanied by analysis of incidental repeat photographs and field observations. As evidenced by the series of repeat photographs, the vegetation cover of the catchments decreased up to 1975 and rapid reforestation occurred thereafter. A multiple regression analysis (R2=0.53, P<0.01) showed that scar density is negatively correlated with NDVI and positively with average gradient of very steep slopes (>60%). Moreover, due to reduction in discharge and sediment flow from the rehabilitated catchments, stream adjustments were observed in the field: previously braided stream channels have changed to single-thread streams, many lateral bars are stabilized and covered by vegetation, stream channels are incising due to clear water effect and the size of boulder deposits decreases. Therefore, the study shows that, land degradation activities in the upper catchments resulted in changes in hydro-geomorphic characteristics of the streams and reduction in runoff and sediment transport to the Raya Valley. Key words: scar density; NDVI; stream incision; soil and water conservation; stream adjustment; land use change.

  9. Evolution of bimodal volcanism in Gona, Ethiopia: geochemical associations and geodynamic implications for the East African Rift System

    NASA Astrophysics Data System (ADS)

    Ghosh, N.; Basu, A. R.; Gregory, R. T.; Richards, I.; Quade, J.; Ebinger, C. J.

    2013-12-01

    The East African rift system in Ethiopia formed in the Earth's youngest flood basalt province, and provides a natural laboratory to study the geochemistry of bimodal volcanism and its implications for plume-derived magmatism, mantle-lithosphere interactions and evolution of continental rifts from plate extension to rupture. Our geochemical studies of the ~6 Ma to recent eruptive products from Gona within the Afar Rift Zone are understood in context of crustal and upper mantle seismic imaging studies that provide constraints on spatial variations. Geochemical (major element, trace element and isotope) analyses of basalts and rhyolitic tuff from Gona indicate a common magma source for these bimodal volcanics. Light rare earth elements (LREEs) are enriched with a strong negative Eu anomaly and a positive Ce anomaly in some of the silicic volcanic rocks. We observe strong depletions in Sr and higher concentrations of Zr, Hf, Th, Nb and Ta. We hypothesize that the silicic rocks may be residues from a plume-derived enriched magma source, following partial melting with fractional crystallization of plagioclase at shallow magma chambers. The absence of Nb-Ta anomaly shows no crustal assimilation by magmas. Sr isotopes, in conjunction with Nd and Pb isotopes and a strong Ce anomaly could reflect interaction of the parent magma with a deep saline aquifer or brine. Nd isotopic ratios (ɛNd = 1.9 to 4.6) show similarity of the silicic tuffs and basalts in their isotopic compositions except for some ~6 Ma lavas showing MORB-like values (ɛNd = 5 to 8.7) that suggest involvement of the asthenosphere with the plume source. Except for one basaltic tuff, the whole rock oxygen isotopic ratios of the Gona basalts range from +5.8‰ to +7.9‰, higher than the δ values for typical MORB, +5.7. The oxygen isotopes in whole rocks from the rhyolite tuffs vary from 14.6‰ to 20.9‰ while their Sr isotope ratios <0.706, indicative of post-depositional low T alteration of these silicic

  10. Multiple Virus Lineages Sharing Recent Common Ancestry Were Associated with a Large Rift Valley Fever Outbreak among Livestock in Kenya during 2006-2007▿ †

    PubMed Central

    Bird, Brian H.; Githinji, Jane W. K.; Macharia, Joseph M.; Kasiiti, Jacqueline L.; Muriithi, Rees M.; Gacheru, Stephen G.; Musaa, Joseph O.; Towner, Jonathan S.; Reeder, Serena A.; Oliver, Jennifer B.; Stevens, Thomas L.; Erickson, Bobbie R.; Morgan, Laura T.; Khristova, Marina L.; Hartman, Amy L.; Comer, James A.; Rollin, Pierre E.; Ksiazek, Thomas G.; Nichol, Stuart T.

    2008-01-01

    Rift Valley fever (RVF) virus historically has caused widespread and extensive outbreaks of severe human and livestock disease throughout Africa, Madagascar, and the Arabian Peninsula. Following unusually heavy rainfall during the late autumn of 2006, reports of human and animal illness consistent with RVF virus infection emerged across semiarid regions of the Garissa District of northeastern Kenya and southern Somalia. Following initial RVF virus laboratory confirmation, a high-throughput RVF diagnostic facility was established at the Kenyan Central Veterinary Laboratories in Kabete, Kenya, to support the real-time identification of infected livestock and to facilitate outbreak response and control activities. A total of 3,250 specimens from a variety of animal species, including domesticated livestock (cattle, sheep, goats, and camels) and wildlife collected from a total of 55 of 71 Kenyan administrative districts, were tested by molecular and serologic assays. Evidence of RVF infection was found in 9.2% of animals tested and across 23 districts of Kenya, reflecting the large number of affected livestock and the geographic extent of the outbreak. The complete S, M, and/or L genome segment sequence was obtained from a total of 31 RVF virus specimens spanning the entire known outbreak period (December-May) and geographic areas affected by RVF virus activity. Extensive genomic analyses demonstrated the concurrent circulation of multiple virus lineages, gene segment reassortment, and the common ancestry of the 2006/2007 outbreak viruses with those from the 1997-1998 east African RVF outbreak. Evidence of recent increases in genomic diversity and effective population size 2 to 4 years prior to the 2006-2007 outbreak also was found, indicating ongoing RVF virus activity and evolution during the interepizootic/epidemic period. These findings have implications for further studies of basic RVF virus ecology and the design of future surveillance/diagnostic activities, and

  11. The Lithosphere of The East African Rift System: Insights From Three-Dimensional Density Modelling

    NASA Astrophysics Data System (ADS)

    Woldetinsae, G.; Götze, H. J.

    2004-12-01

    We use the gravity data that cover the large part of the Afro-Arabian rift system, the eastern branch (Ethiopia-Afar and northern Kenya), in order to produce a regional density model. In an earlier work the new and old gravity data were compiled, evaluated and homogenised using a consistent data reduction procedures. Three basic constraints widely spaced over a 1500 km rift length have been generated between 1969 and 2003 by an international consortium with information from isostatic models, global tomography, geological, geochemical evidences, and petrological and experimental results. These are integrated and applied to the model to constrain upper and lower crustal structures underneath the Rift and Plateau areas. New crustal thickness estimations (Dugda et al., 2004 in press) and inferences from recent velocity models along the axis of the Main Ethiopian Rift (Keller et al., 2004) are added to the density model. Thirty parallel planes cutting across the entire plateau region and Rift system (Afar-Ethiopia-Kenya) are interactively modelled using a starting geometry that invoke asthenospheric upwelling. Densities for the upper crust are calculated using Nafe Drake method, averaged from earlier interpretation and measured ones from the Geological Survey of Ethiopia database (e.g. Geothermal project, GSE petrophysical laboratory, pers. communication). Densities for lower crust are estimated using the approach by Sobolov and Babyko (1994). We used also lower crustal densities calculated by (Simyu and Keller, 1997) for the northern part of Kenya rift. The preliminary model offers a possibility to quantify depth, thickness and volumes of different geological interfaces and bodies. As for example, the estimation of the volume of volcanic constructs on the western plateau of Ethiopia is relatively larger than the eastern plateau. The load map derived from the model indicated maximum crustal loads at the crust/mantle interface (ca. 40km) on the eastern and western flanks

  12. Rift initiation with volatiles and magma

    NASA Astrophysics Data System (ADS)

    Ebinger, Cynthia; Muirhead, James; Roecker, Steve; Tiberi, Christel; Muzuka, Alfred; Ferdinand, Rrichard; Mulibo, Gabrile; Kianji, Gladys

    2015-04-01

    Rift initiation in cratonic lithosphere remains an outstanding problem in continental tectonics, but strain and magmatism patterns in youthful sectors of the East African rift provide new insights. Few teleseisms occur in the Eastern rift arm of the East African rift system, except the southernmost sector in northern Tanzania where extension occurs in Archaean lithosphere. The change in seismic energy release occurs over a narrow along-axis zone, and between sectors with and without volcanoes in the central rift valley. Are these differences in strain behavior indicative of along-strike variations in a) rheology; b) strain transfer from border faults to magma intrusion zones; c) dike vs fault slip; and/or d) shallow vs deep magma chambers? We present time-space relations of seismicity recorded on a 38-station array spanning the Kenya-Tanzania border, focal mechanisms for the largest events during those time periods, and compare these to longer-term strain patterns. Lower crustal seismicity occurs along the rift length, including sectors on and off craton, and those with and without central rift valley volcanoes, and we see no clear along-strike variation in seismogenic layer thickness. One explanation for widespread lower crustal seismicity is high gas pressures and volatile migration from active metasomatism of upper mantle and magma degassing, consistent with very high volatile flux along fault zones, and widespread metasomatism of xenoliths. Volatile release and migration may be critical to strength reduction of initially cold, strong cratonic lithosphere. Seismicity patterns indicate strain (and fluid?) transfer from the Manyara border fault to Gelai shield volcano (faulting, diking) via Oldoinyo Lengai volcano. Our focal mechanisms and Global CMTs from an intense fault-dike episode (2007) show a local, temporally stable, rotation from ~E-W extension to NE-SE extension in this linkage zone, consistent with longer term patterns recorded in vent and eruptive

  13. Presence of Viral RNA and Proteins in Exosomes from Cellular Clones Resistant to Rift Valley Fever Virus Infection.

    PubMed

    Ahsan, Noor A; Sampey, Gavin C; Lepene, Ben; Akpamagbo, Yao; Barclay, Robert A; Iordanskiy, Sergey; Hakami, Ramin M; Kashanchi, Fatah

    2016-01-01

    Rift Valley Fever Virus (RVFV) is a RNA virus that belongs to the genus Phlebovirus, family Bunyaviridae. It infects humans and livestock and causes Rift Valley fever. RVFV is considered an agricultural pathogen by the USDA, as it can cause up to 100% abortion in cattle and extensive death of newborns. In addition, it is designated as Category A pathogen by the CDC and the NIAID. In some human cases of RVFV infection, the virus causes fever, ocular damage, liver damage, hemorrhagic fever, and death. There are currently limited options for vaccine candidates, which include the MP-12 and clone 13 versions of RVFV. Viral infections often deregulate multiple cellular pathways that contribute to replication and host pathology. We have previously shown that latent human immunodeficiency virus-1 (HIV-1) and human T-cell lymphotropic virus-1 (HTLV-1) infected cells secrete exosomes that contain short viral RNAs, limited number of genomic RNAs, and viral proteins. These exosomes largely target neighboring cells and activate the NF-κB pathway, leading to cell proliferation, and overall better viral replication. In this manuscript, we studied the effects of exosome formation from RVFV infected cells and their function on recipient cells. We initially infected cells, isolated resistant clones, and further purified using dilution cloning. We then characterized these cells as resistant to new RVFV infection, but sensitive to other viral infections, including Venezuelan Equine Encephalitis Virus (VEEV). These clones contained normal markers (i.e., CD63) for exosomes and were able to activate the TLR pathway in recipient reporter cells. Interestingly, the exosome rich preparations, much like their host cell, contained viral RNA (L, M, and S genome). The RNAs were detected using qRT-PCR in both parental and exosomal preparations as well as in CD63 immunoprecipitates. Viral proteins such as N and a modified form of NSs were present in some of these exosomes. Finally, treatment of

  14. Presence of Viral RNA and Proteins in Exosomes from Cellular Clones Resistant to Rift Valley Fever Virus Infection

    PubMed Central

    Ahsan, Noor A.; Sampey, Gavin C.; Lepene, Ben; Akpamagbo, Yao; Barclay, Robert A.; Iordanskiy, Sergey; Hakami, Ramin M.; Kashanchi, Fatah

    2016-01-01

    Rift Valley Fever Virus (RVFV) is a RNA virus that belongs to the genus Phlebovirus, family Bunyaviridae. It infects humans and livestock and causes Rift Valley fever. RVFV is considered an agricultural pathogen by the USDA, as it can cause up to 100% abortion in cattle and extensive death of newborns. In addition, it is designated as Category A pathogen by the CDC and the NIAID. In some human cases of RVFV infection, the virus causes fever, ocular damage, liver damage, hemorrhagic fever, and death. There are currently limited options for vaccine candidates, which include the MP-12 and clone 13 versions of RVFV. Viral infections often deregulate multiple cellular pathways that contribute to replication and host pathology. We have previously shown that latent human immunodeficiency virus-1 (HIV-1) and human T-cell lymphotropic virus-1 (HTLV-1) infected cells secrete exosomes that contain short viral RNAs, limited number of genomic RNAs, and viral proteins. These exosomes largely target neighboring cells and activate the NF-κB pathway, leading to cell proliferation, and overall better viral replication. In this manuscript, we studied the effects of exosome formation from RVFV infected cells and their function on recipient cells. We initially infected cells, isolated resistant clones, and further purified using dilution cloning. We then characterized these cells as resistant to new RVFV infection, but sensitive to other viral infections, including Venezuelan Equine Encephalitis Virus (VEEV). These clones contained normal markers (i.e., CD63) for exosomes and were able to activate the TLR pathway in recipient reporter cells. Interestingly, the exosome rich preparations, much like their host cell, contained viral RNA (L, M, and S genome). The RNAs were detected using qRT-PCR in both parental and exosomal preparations as well as in CD63 immunoprecipitates. Viral proteins such as N and a modified form of NSs were present in some of these exosomes. Finally, treatment of

  15. Characterization of Rift Valley Fever Virus MP-12 Strain Encoding NSs of Punta Toro Virus or Sandfly Fever Sicilian Virus

    PubMed Central

    Lihoradova, Olga A.; Indran, Sabarish V.; Kalveram, Birte; Lokugamage, Nandadeva; Head, Jennifer A.; Gong, Bin; Tigabu, Bersabeh; Juelich, Terry L.; Freiberg, Alexander N.; Ikegami, Tetsuro

    2013-01-01

    Rift Valley fever virus (RVFV; genus Phlebovirus, family Bunyaviridae) is a mosquito-borne zoonotic pathogen which can cause hemorrhagic fever, neurological disorders or blindness in humans, and a high rate of abortion in ruminants. MP-12 strain, a live-attenuated candidate vaccine, is attenuated in the M- and L-segments, but the S-segment retains the virulent phenotype. MP-12 was manufactured as an Investigational New Drug vaccine by using MRC-5 cells and encodes a functional NSs gene, the major virulence factor of RVFV which 1) induces a shutoff of the host transcription, 2) inhibits interferon (IFN)-β promoter activation, and 3) promotes the degradation of dsRNA-dependent protein kinase (PKR). MP-12 lacks a marker for differentiation of infected from vaccinated animals (DIVA). Although MP-12 lacking NSs works for DIVA, it does not replicate efficiently in type-I IFN-competent MRC-5 cells, while the use of type-I IFN-incompetent cells may negatively affect its genetic stability. To generate modified MP-12 vaccine candidates encoding a DIVA marker, while still replicating efficiently in MRC-5 cells, we generated recombinant MP-12 encoding Punta Toro virus Adames strain NSs (rMP12-PTNSs) or Sandfly fever Sicilian virus NSs (rMP12-SFSNSs) in place of MP-12 NSs. We have demonstrated that those recombinant MP-12 viruses inhibit IFN-β mRNA synthesis, yet do not promote the degradation of PKR. The rMP12-PTNSs, but not rMP12-SFSNSs, replicated more efficiently than recombinant MP-12 lacking NSs in MRC-5 cells. Mice vaccinated with rMP12-PTNSs or rMP12-SFSNSs induced neutralizing antibodies at a level equivalent to those vaccinated with MP-12, and were efficiently protected from wild-type RVFV challenge. The rMP12-PTNSs and rMP12-SFSNSs did not induce antibodies cross-reactive to anti-RVFV NSs antibody and are therefore applicable to DIVA. Thus, rMP12-PTNSs is highly efficacious, replicates efficiently in MRC-5 cells, and encodes a DIVA marker, all of which are

  16. Adapting to climate variability and change: experiences from cereal-based farming in the central rift and Kobo Valleys, Ethiopia.

    PubMed

    Kassie, Belay Tseganeh; Hengsdijk, Huib; Rötter, Reimund; Kahiluoto, Helena; Asseng, Senthold; Van Ittersum, Martin

    2013-11-01

    Small-holder farmers in Ethiopia are facing several climate related hazards, in particular highly variable rainfall with severe droughts which can have devastating effects on their livelihoods. Projected changes in climate are expected to aggravate the existing challenges. This study examines farmer perceptions on current climate variability and long-term changes, current adaptive strategies, and potential barriers for successful further adaptation in two case study regions-the Central Rift Valley (CRV) and Kobo Valley. The study was based on a household questionnaire, interviews with key stakeholders, and focus group discussions. The result revealed that about 99 % of the respondents at the CRV and 96 % at the Kobo Valley perceived an increase in temperature and 94 % at CRV and 91 % at the Kobo Valley perceived a decrease in rainfall over the last 20-30 years. Inter-annual and intraseasonal rainfall variability also has increased according to the farmers. The observed climate data (1977-2009) also showed an increasing trend in temperature and high inter-annual and intra-seasonal rainfall variability. In contrast to farmers' perceptions of a decrease in rainfall totals, observed rainfall data showed no statistically significant decline. The interaction among various bio-physical and socio-economic factors, changes in rainfall intensity and reduced water available to crops due to increased hot spells, may have influenced the perception of farmers with respect to rainfall trends. In recent decades, farmers in both the CRV and Kobo have changed farming practices to adapt to perceived climate change and variability, for example, through crop and variety choice, adjustment of cropping calendar, and in situ moisture conservation. These relatively low-cost changes in farm practices were within the limited adaptation capacity of farmers, which may be insufficient to deal with the impacts of future climate change. Anticipated climate change is expected to impose new

  17. Adapting to Climate Variability and Change: Experiences from Cereal-Based Farming in the Central Rift and Kobo Valleys, Ethiopia

    NASA Astrophysics Data System (ADS)

    Kassie, Belay Tseganeh; Hengsdijk, Huib; Rötter, Reimund; Kahiluoto, Helena; Asseng, Senthold; Van Ittersum, Martin

    2013-11-01

    Small-holder farmers in Ethiopia are facing several climate related hazards, in particular highly variable rainfall with severe droughts which can have devastating effects on their livelihoods. Projected changes in climate are expected to aggravate the existing challenges. This study examines farmer perceptions on current climate variability and long-term changes, current adaptive strategies, and potential barriers for successful further adaptation in two case study regions—the Central Rift Valley (CRV) and Kobo Valley. The study was based on a household questionnaire, interviews with key stakeholders, and focus group discussions. The result revealed that about 99 % of the respondents at the CRV and 96 % at the Kobo Valley perceived an increase in temperature and 94 % at CRV and 91 % at the Kobo Valley perceived a decrease in rainfall over the last 20-30 years. Inter-annual and intraseasonal rainfall variability also has increased according to the farmers. The observed climate data (1977-2009) also showed an increasing trend in temperature and high inter-annual and intra-seasonal rainfall variability. In contrast to farmers’ perceptions of a decrease in rainfall totals, observed rainfall data showed no statistically significant decline. The interaction among various bio-physical and socio-economic factors, changes in rainfall intensity and reduced water available to crops due to increased hot spells, may have influenced the perception of farmers with respect to rainfall trends. In recent decades, farmers in both the CRV and Kobo have changed farming practices to adapt to perceived climate change and variability, for example, through crop and variety choice, adjustment of cropping calendar, and in situ moisture conservation. These relatively low-cost changes in farm practices were within the limited adaptation capacity of farmers, which may be insufficient to deal with the impacts of future climate change. Anticipated climate change is expected to impose new

  18. Gravity study of the Central African Rift system: a model of continental disruption 2. The Darfur domal uplift and associated Cainozoic volcanism

    NASA Astrophysics Data System (ADS)

    Bermingham, P. M.; Fairhead, J. D.; Stuart, G. W.

    1983-05-01

    Gravity studies of the Darfur uplift, Western Sudan, show it to be associated with a circular negative Bouguer anomaly, 50 mGal in amplitude and 700 km across. A three-dimensional model interpretation of the Darfur anomaly, using constraints deduced from geophysical studies of similar but more evolved Kenya and Ethiopia domes, suggests either a low-density laccolithic body at mid-lithospheric depth (~ 60 km) or a thinned lithosphere with emplacement at high level of low-density asthenospheric material. The regional setting of the Darfur uplift is described in terms of it being an integral part of the Central African Rift System which is shown to be broadly equivalent to the early to middle Miocene stage in the development of the Afro-Arabian Rift System. Comparisons between these rift systems suggest that extensional tectonics and passive rifting, resulting in the subsiding sedimentary rift basins associated with the Ngaoundere, Abu Gabra, Red Sea and Gulf of Aden rifts, are more typical of the early stage development of passive continental margins than the active domal uplift and development of rifted features associated with the Darfur, Kenya and Ethiopia domes.

  19. Applying the One Health principles: a trans-sectoral coordination framework for preventing and responding to Rift Valley fever outbreaks.

    PubMed

    de La Rocque, S; Formenty, P

    2014-08-01

    Rift Valley fever (RVF) is a good example of a disease for which a One Health approach can significantly improve the management of outbreaks: RVF is a vector- borne zoonotic disease, its dynamics differ between eco-epidemiological patterns and are modulated by eco-climatic factors. Therefore, collaboration between sectors, disciplines and role players, as well as an understanding of the local epidemiology of the disease, are key prerequisites for proper risk assessment and outbreak control. These principles drove the Food and Agriculture Organization of the United Nations (FAO) and the World Health Organization (WHO) to develop an inter-sectoral strategic approach, with specific actions recommended for each of the four periods in the development of the outbreak (forecasting and preparedness, alert, epidemic control, post-epidemic). Through several outbreak response missions between 2006 and 2012 in various countries, an implementation framework was developed by WHO, FAO and the national authorities of affected countries and used to build national response action plans. The framework proposes a structured attribution of duty and responsibilities to committees made up of representatives of the various institutional and operational role players, and with clear mandates and terms of reference (TOR). Such an approach, ensuring real-time sharing of information, coherence in the various aspects of the response, and ownership of the strategy, has proven its efficiency. It could also be used, with appropriate adjustments in the TOR, for other zoonotic diseases. PMID:25707183

  20. Coupling Vector-host Dynamics with Weather Geography and Mitigation Measures to Model Rift Valley Fever in Africa

    PubMed Central

    McMahon, B.H.; Manore, C.A.; Hyman, J.M.; LaBute, M.X.; Fair, J.M.

    2015-01-01

    We present and characterize a multi-host epidemic model of Rift Valley fever (RVF) virus in East Africa with geographic spread on a network, rule-based mitigation measures, and mosquito infection and population dynamics. Susceptible populations are depleted by disease and vaccination and are replenished with the birth of new animals. We observe that the severity of the epidemics is strongly correlated with the duration of the rainy season and that even severe epidemics are abruptly terminated when the rain stops. Because naturally acquired herd immunity is established, total mortality across 25 years is relatively insensitive to many mitigation approaches. Strong reductions in cattle mortality are expected, however, with sufficient reduction in population densities of either vectors or susceptible (ie. unvaccinated) hosts. A better understanding of RVF epidemiology would result from serology surveys to quantify the importance of herd immunity in epidemic control, and sequencing of virus from representative animals to quantify the realative importance of transportation and local reservoirs in nucleating yearly epidemics. Our results suggest that an effective multi-layered mitigation strategy would include vector control, movement control, and vaccination of young animals yearly, even in the absence of expected rainfall. PMID:25892858

  1. Dietary Fluoride Intake and Associated Skeletal and Dental Fluorosis in School Age Children in Rural Ethiopian Rift Valley

    PubMed Central

    Kebede, Aweke; Retta, Negussie; Abuye, Cherinet; Whiting, Susan J.; Kassaw, Melkitu; Zeru, Tesfaye; Tessema, Masresha; Kjellevold, Marian

    2016-01-01

    An observational study was conducted to determine dietary fluoride intake, diet, and prevalence of dental and skeletal fluorosis of school age children in three fluorosis endemic districts of the Ethiopian Rift Valley having similar concentrations of fluoride (F) in drinking water (~5 mg F/L). The duplicate plate method was used to collect foods consumed by children over 24 h from 20 households in each community (n = 60) and the foods, along with water and beverages, were analyzed for fluoride (F) content. Prevalence of dental and skeletal fluorosis was determined using presence of clinical symptoms in children (n = 220). Daily dietary fluoride intake was at or above tolerable upper intake level (UL) of 10 mg F/day and the dietary sources (water, prepared food and beverages) all contributed to the daily fluoride burden. Urinary fluoride in children from Fentale and Adamitulu was almost twice (>5 mg/L) the concentration found in urine from children from Alaba, where rain water harvesting was most common. Severe and moderate dental fluorosis was found in Alaba and Adamitulu, the highest severity and prevalence being in the latter district where staple foods were lowest in calcium. Children in all three areas showed evidence of both skeletal and non-skeletal fluorosis. Our data support the hypothesis that intake of calcium rich foods in addition to using rain water for household consumption and preparation of food, may help in reducing risk of fluorosis in Ethiopia, but prospective studies are needed. PMID:27472351

  2. Rift Valley Fever Virus Structural and Nonstructural Proteins: Recombinant Protein Expression and Immunoreactivity Against Antisera from Sheep

    PubMed Central

    Faburay, Bonto; Wilson, William; McVey, D. Scott; Drolet, Barbara S.; Weingartl, Hana; Madden, Daniel; Young, Alan; Ma, Wenjun

    2013-01-01

    Abstract The Rift Valley fever virus (RVFV) encodes the structural proteins nucleoprotein (N), aminoterminal glycoprotein (Gn), carboxyterminal glycoprotein (Gc), and L protein, 78-kD, and the nonstructural proteins NSm and NSs. Using the baculovirus system, we expressed the full-length coding sequence of N, NSs, NSm, Gc, and the ectodomain of the coding sequence of the Gn glycoprotein derived from the virulent strain of RVFV ZH548. Western blot analysis using anti-His antibodies and monoclonal antibodies against Gn and N confirmed expression of the recombinant proteins, and in vitro biochemical analysis showed that the two glycoproteins, Gn and Gc, were expressed in glycosylated form. Immunoreactivity profiles of the recombinant proteins in western blot and in indirect enzyme-linked immunosorbent assay against a panel of antisera obtained from vaccinated or wild type (RVFV)-challenged sheep confirmed the results obtained with anti-His antibodies and demonstrated the suitability of the baculo-expressed antigens for diagnostic assays. In addition, these recombinant proteins could be valuable for the development of diagnostic methods that differentiate infected from vaccinated animals (DIVA). PMID:23962238

  3. Ecological Niche Modeling and Land Cover Risk Areas for Rift Valley Fever Vector, Culex tritaeniorhynchus Giles in Jazan, Saudi Arabia

    PubMed Central

    Sallam, Mohamed F.; Al Ahmed, Azzam M.; Abdel-Dayem, Mahmoud S.; Abdullah, Mohamed A. R.

    2013-01-01

    Background The mosquito, Culex tritaeniorhynchus Giles is a prevalent and confirmed Rift Valley Fever virus (RVFV) vector. This vector, in association with Aedimorphus arabiensis (Patton), was responsible for causing the outbreak of 2000 in Jazan Province, Saudi Arabia. Methodology/Principal Findings Larval occurrence records and a total of 19 bioclimatic and three topographic layers imported from Worldclim Database were used to predict the larval suitable breeding habitats for this vector in Jazan Province using ArcGIS ver.10 and MaxEnt modeling program. Also, a supervised land cover classification from SPOT5 imagery was developed to assess the land cover distribution within the suitable predicted habitats. Eleven bioclimatic and slope attributes were found to be the significant predictors for this larval suitable breeding habitat. Precipitation and temperature were strong predictors of mosquito distribution. Among six land cover classes, the linear regression model (LM) indicated wet muddy substrate is significantly associated with high-very high suitable predicted habitats (R2 = 73.7%, P<0.05). Also, LM indicated that total dissolved salts (TDS) was a significant contributor (R2 = 23.9%, P<0.01) in determining mosquito larval abundance. Conclusion/Significance This model is a first step in understanding the spatial distribution of Cx. tritaeniorhynchus and consequently the risk of RVFV in Saudi Arabia and to assist in planning effective mosquito surveillance and control programs by public health personnel and researchers. PMID:23762424

  4. Choice of inbred rat strain impacts lethality and disease course after respiratory infection with Rift Valley Fever Virus

    PubMed Central

    Bales, Jacquelyn M.; Powell, Diana S.; Bethel, Laura M.; Reed, Douglas S.; Hartman, Amy L.

    2012-01-01

    Humans infected with Rift Valley Fever Virus (RVFV) generally recover after a febrile illness; however, a proportion of patients progress to a more severe clinical outcome such as hemorrhagic fever or meningoencephalitis. RVFV is naturally transmitted to livestock and humans by mosquito bites, but it is also infectious through inhalational exposure, making it a potential bioterror weapon. To better understand the disease caused by inhalation of RVFV, Wistar-Furth, ACI, or Lewis rats were exposed to experimental aerosols containing virulent RVFV. Wistar-Furth rats developed a rapidly progressing lethal hepatic disease after inhalational exposure; ACI rats were 100-fold less susceptible and developed fatal encephalitis after infection. Lewis rats, which do not succumb to parenteral inoculation with RVFV, developed fatal encephalitis after aerosol infection. RVFV was found in the liver, lung, spleen, heart, kidney and brain of Wistar Furth rats that succumbed after aerosol exposure. In contrast, RVFV was found only in the brains of ACI or Lewis rats that succumbed after aerosol exposure. Lewis rats that survived s.c. infection were not protected against subsequent re-challenge by aerosol exposure to the homologous virus. This is the first side-by-side comparison of the lethality and pathogenesis of RVFV in three rat strains after aerosol exposure and the first step toward developing a rodent model suitable for use under the FDA Animal Rule to test potential vaccines and therapeutics for aerosol exposure to RVFV. PMID:22919694

  5. Climate impacts on environmental risks evaluated from space: a conceptual approach to the case of Rift Valley Fever in Senegal

    PubMed Central

    Tourre, Yves M.; Lacaux, Jean-Pierre; Vignolles, Cécile; Lafaye, Murielle

    2009-01-01

    Background Climate and environment vary across many spatio-temporal scales, including the concept of climate change, which impact on ecosystems, vector-borne diseases and public health worldwide. Objectives To develop a conceptual approach by mapping climatic and environmental conditions from space and studying their linkages with Rift Valley Fever (RVF) epidemics in Senegal. Design Ponds in which mosquitoes could thrive were identified from remote sensing using high-resolution SPOT-5 satellite images. Additional data on pond dynamics and rainfall events (obtained from the Tropical Rainfall Measuring Mission) were combined with hydrological in-situ data. Localisation of vulnerable hosts such as penned cattle (from QuickBird satellite) were also used. Results Dynamic spatio-temporal distribution of Aedes vexans density (one of the main RVF vectors) is based on the total rainfall amount and ponds’ dynamics. While Zones Potentially Occupied by Mosquitoes are mapped, detailed risk areas, i.e. zones where hazards and vulnerability occur, are expressed in percentages of areas where cattle are potentially exposed to mosquitoes’ bites. Conclusions This new conceptual approach, using precise remote-sensing techniques, simply relies upon rainfall distribution also evaluated from space. It is meant to contribute to the implementation of operational early warning systems for RVF based on both natural and anthropogenic climatic and environmental changes. In a climate change context, this approach could also be applied to other vector-borne diseases and places worldwide. PMID:20052381

  6. Dietary Fluoride Intake and Associated Skeletal and Dental Fluorosis in School Age Children in Rural Ethiopian Rift Valley.

    PubMed

    Kebede, Aweke; Retta, Negussie; Abuye, Cherinet; Whiting, Susan J; Kassaw, Melkitu; Zeru, Tesfaye; Tessema, Masresha; Kjellevold, Marian

    2016-01-01

    An observational study was conducted to determine dietary fluoride intake, diet, and prevalence of dental and skeletal fluorosis of school age children in three fluorosis endemic districts of the Ethiopian Rift Valley having similar concentrations of fluoride (F) in drinking water (~5 mg F/L). The duplicate plate method was used to collect foods consumed by children over 24 h from 20 households in each community (n = 60) and the foods, along with water and beverages, were analyzed for fluoride (F) content. Prevalence of dental and skeletal fluorosis was determined using presence of clinical symptoms in children (n = 220). Daily dietary fluoride intake was at or above tolerable upper intake level (UL) of 10 mg F/day and the dietary sources (water, prepared food and beverages) all contributed to the daily fluoride burden. Urinary fluoride in children from Fentale and Adamitulu was almost twice (>5 mg/L) the concentration found in urine from children from Alaba, where rain water harvesting was most common. Severe and moderate dental fluorosis was found in Alaba and Adamitulu, the highest severity and prevalence being in the latter district where staple foods were lowest in calcium. Children in all three areas showed evidence of both skeletal and non-skeletal fluorosis. Our data support the hypothesis that intake of calcium rich foods in addition to using rain water for household consumption and preparation of food, may help in reducing risk of fluorosis in Ethiopia, but prospective studies are needed. PMID:27472351

  7. A preliminary evaluation of the DDT contamination of sediments in lakes Natron and Bogoria (Eastern Rift Valley, Africa).

    PubMed

    Bettinetti, Roberta; Quadroni, Silvia; Crosa, Giuseppe; Harper, David; Dickie, Jennifer; Kyalo, Margaret; Mavuti, Kenneth; Galassi, Silvana

    2011-06-01

    Dichlorodiphenyltrichloroethane (DDT) is still used in Africa for the indoor control of malaria and it may represent a potential hazard for wildlife. The littoral sediments of two alkaline-saline lakes, Natron (Tanzania) and Bogoria (Kenya), in the Eastern Rift Valley, supporting large populations of lesser flamingos (Phoeniconaias minor), were analysed for DDT residues. Physical-chemical analyses (temperature, conductivity, pH and dissolved oxygen) were also performed on the water of the two lakes and in the tributaries of Lake Natron, to evaluate the influence of the environmental variables on pollutant occurrence. At Lake Natron, around 1 km from the sediment collection sites, tree leaves of Acacia tortilis were also collected. The main metabolite found in all sediment samples was pp'DDE, whilst equal concentrations of pp'DDT and pp'DDE were measured in acacia leaves. The levels of DDTs measured in the sediments were within 5.9-30.9 ng g(-1) d.w., reaching the maximum value in a tributary of Lake Natron. On the whole, the contamination of Lake Natron and Lake Bogoria basins seems to be quite moderate. Nevertheless, the pp'DDE/pp'DDT ratio equals 1 in the Acacia tortilis leaves, which makes one suppose that the input of the parent compound was rather recent and could have been from aerial transport or dust from relatively close-by old pesticides storage sites. PMID:21809777

  8. A Rift Valley fever risk surveillance system for Africa using remotely sensed data: potential for use on other continents.

    PubMed

    Linthicum, Kenneth J; Anyamba, Assaf; Britch, Seth C; Chretien, Jean-Paul; Erickson, Ralph L; Small, Jennifer; Tucker, Compton J; Bennett, Kristine E; Mayer, Richard T; Schmidtmann, Edward T; Andreadis, Theodore G; Anderson, John F; Wilson, William C; Freier, Jerome E; James, Angela M; Miller, Ryan S; Drolet, Barbara S; Miller, Scott N; Tedrow, Christy A; Bailey, Charles L; Strickman, Daniel A; Barnard, Donald R; Clark, Gary G; Zou, Li

    2007-01-01

    The authors developed a monitoring and risk mapping system using normalized difference vegetation index (NDVI) times series data derived from the advanced very high resolution radiometer (AVHRR) instrument on polar orbiting national oceanographic and atmospheric administration (NOAA) satellites to map areas with a potential for a Rift Valley fever (RVF) outbreaks in sub-Saharan Africa. This system is potentially an important tool for local, national and international organisations involved in the prevention and control of animal and human disease, permitting focused and timely implementation of disease control strategies several months before an outbreak. We are currently developing a geographic information system (GIS)-based remotely sensed early warning system for potential RVF vectors in the United States. Forecasts of the potential emergence of mosquito vectors will be disseminated throughout the United States, providing several months' warning in advance of potentially elevated mosquito populations. This would allow timely, targeted implementation of mosquito control, animal quarantine and vaccine strategies to reduce or prevent animal and human disease. PMID:20422546

  9. Differences in aerosolization of Rift Valley fever virus resulting from choice of inhalation exposure chamber: implications for animal challenge studies

    PubMed Central

    Bethel, Laura M.; Powell, Diana S.; Caroline, Amy L.; Hartman, Amy L.

    2014-01-01

    Abstract The aerosol characteristics of Rift Valley fever virus (RVFV) were evaluated to achieve reproducible infection of experimental animals with aerosolized RVFV suitable for animal efficacy studies. Spray factor (SF), the ratio between the concentrations of the aerosolized agent to the agent in the aerosol generator, is used to compare performance differences between aerosol exposures. SF indicates the efficiency of the aerosolization process; a higher SF means a lower nebulizer concentration is needed to achieve a desired inhaled dose. Relative humidity levels as well as the duration of the exposure and choice of exposure chamber all impacted RVFV SF. Differences were also noted between actual and predicted minute volumes for different species of nonhuman primates. While NHP from Old World species (Macaca fascicularis, M. mulatta, Chlorocebus aethiops) generally had a lower actual minute volume than predicted, the actual minute volume for marmosets (Callithrix jacchus) was higher than predicted (150% for marmosets compared with an average of 35% for all other species examined). All of these factors (relative humidity, chamber, duration, and minute volume) impact the ability to reliably and reproducibly deliver a specific dose of aerosolized RVFV. The implications of these findings for future pivotal efficacy studies are discussed. PMID:24532259

  10. Transmission Dynamics of Rift Valley Fever Virus: Effects of Live and Killed Vaccines on Epizootic Outbreaks and Enzootic Maintenance

    PubMed Central

    Chamchod, Farida; Cosner, Chris; Cantrell, R. Stephen; Beier, John C.; Ruan, Shigui

    2016-01-01

    Rift Valley fever virus (RVFV) is an arthropod-borne viral pathogen that causes significant morbidity and mortality in small ruminants throughout Africa and the Middle East. Due to the sporadic and explosive nature of RVF outbreaks, vaccination has proved challenging to reduce RVFV infection in the ruminant population. Currently, there are two available types of vaccines, live and killed, in endemic areas. In this study, two mathematical models have been developed to explore the impact of live and killed vaccines on the transmission dynamics of RVFV. We demonstrate in general that vaccination helps reduce the severity of RVF outbreaks and that less delay in implementation and more vaccination attempts and effective vaccines can reduce the outbreak magnitude and the endemic number of RVFV. However, an introduction of a number of ruminants vaccinated by live vaccines in RVFV-free areas may cause an outbreak and RVFV may become endemic if there is sustained use of live vaccines. Other factors that are the important determinants of RVF outbreaks include: unsustained vaccination programs, recruitment of susceptible ruminants, and the seasonal abundance of mosquitoes. PMID:26869999

  11. Seroepidemiological Study of Interepidemic Rift Valley Fever Virus Infection among Persons with Intense Ruminant Exposure in Madagascar and Kenya

    PubMed Central

    Gray, Gregory C.; Anderson, Benjamin D.; LaBeaud, A. Desirée; Heraud, Jean-Michel; Fèvre, Eric M.; Andriamandimby, Soa Fy; Cook, Elizabeth A. J.; Dahir, Saidi; de Glanville, William A.; Heil, Gary L.; Khan, Salah U.; Muiruri, Samuel; Olive, Marie-Marie; Thomas, Lian F.; Merrill, Hunter R.; Merrill, Mary L. M.; Richt, Juergen A.

    2015-01-01

    In this cross-sectional seroepidemiological study we sought to examine the evidence for circulation of Rift Valley fever virus (RVFV) among herders in Madagascar and Kenya. From July 2010 to June 2012, we enrolled 459 herders and 98 controls (without ruminant exposures) and studied their sera (immunoglobulin G [IgG] and IgM through enzyme-linked immunosorbent assay [ELISA] and plaque reduction neutralization test [PRNT] assays) for evidence of previous RVFV infection. Overall, 59 (12.9%) of 459 herders and 7 (7.1%) of the 98 controls were positive by the IgG ELISA assay. Of the 59 ELISA-positive herders, 23 (38.9%) were confirmed by the PRNT assay (21 from eastern Kenya). Two of the 21 PRNT-positive study subjects also had elevated IgM antibodies against RVFV suggesting recent infection. Multivariate modeling in this study revealed that being seminomadic (odds ratio [OR] = 6.4, 95% confidence interval [CI] = 2.1–15.4) was most strongly associated with antibodies against RVFV. Although we cannot know when these infections occurred, it seems likely that some interepidemic RVFV infections are occurring among herders. As there are disincentives regarding reporting RVFV outbreaks in livestock or wildlife, it may be prudent to conduct periodic, limited, active seroepidemiological surveillance for RVFV infections in herders, especially in eastern Kenya. PMID:26458775

  12. Rift Valley fever in a zone potentially occupied by Aedes vexans in Senegal: dynamics and risk mapping

    NASA Astrophysics Data System (ADS)

    Tourre, Y. M.; Vignolles, C.; Lacaux, J.-P.; Bigeard, G.; Ndione, J.-A.; Lafaye, M.

    2009-09-01

    This paper presents an analysis of the interaction between the various variables associated with Rift Valley fever (RVF) such as the mosquito vector, available hosts and rainfall distribution. To that end, the varying zones potentially occupied by mosquitoes (ZPOM), rainfall events and pond dynamics, and the associated exposure of hosts to the RVF virus by Aedes vexans, were analyzed in the Barkedji area of the Ferlo, Senegal, during the 2003 rainy season. Ponds were identified by remote sensing using a high-resolution SPOT-5 satellite image. Additional data on ponds and rainfall events from the Tropical Rainfall Measuring Mission were combined with in-situ entomological and limnimetric measurements, and the localization of vulnerable ruminant hosts (data derived from QuickBird satellite). Since "Ae. vexans productive events” are dependent on the timing of rainfall for their embryogenesis (six days without rain are necessary to trigger hatching), the dynamic spatio-temporal distribution of Ae. vexans density was based on the total rainfall amount and pond dynamics. Detailed ZPOM mapping was obtained on a daily basis and combined with aggressiveness temporal profiles. Risks zones, i.e. zones where hazards and vulnerability are combined, are expressed by the percentages of parks where animals are potentially exposed to mosquito bites. This new approach, simply relying upon rainfall distribution evaluated from space, is meant to contribute to the implementation of a new, operational early warning system for RVF based on environmental risks linked to climatic and environmental conditions.

  13. The development of the East African Rift system in north-central Kenya

    NASA Astrophysics Data System (ADS)

    Hackman, B. D.; Charsley, T. J.; Key, R. M.; Wilkinson, A. F.

    1990-11-01

    Between 1980 and 1986 geological surveying to produce maps on a scale of 1:250,000 was completed over an area of over 100,000 km 2 in north-central Kenya, bounded by the Equator, the Ethiopian border and longitudes 36° and 38 °E. The Gregory Rift, much of which has the structure of an asymmetric half-graben, is the most prominent component of the Cenozoic multiple rift system which extends up to 200 km to the east and for about 100 km to the west, forming the Kenya dome. On the eastern shoulder and fringes two en echelon arrays of late Tertiary to Quaternary multicentre shields can be recognized: to the south is the Aberdares-Mount Kenya-Nyambeni Range chain and, to the north the clusters of Mount Kulal, Asie, Huri Hills and Marsabit, with plateau lavas and fissure vents south of Marsabit in the Laisamis area. The Gregory Rift terminates at the southern end of Lake Turkana. Further north the rift system splays: the arcuate Kinu Sogo fault zone forms an offset link with the central Ethiopian Rift system. In the rifts of north-central Kenya volcanism, sedimentation and extensional tectonics commenced and have been continuous since the late Oligocene. Throughout this period the Elgeyo Fault acted as a major bounding fault. A comparative study of the northern and eastern fringes of the Kenya dome with the axial graben reinforces the impression of regional E-W asymmetry. Deviations from the essential N-trend of the Gregory Rift reflect structural weaknesses in the underlying Proterozoic basement, the Mozambique Orogenic Belt: thus south of Lake Baringo the swing to the southeast parallels the axes of the ca. 620 Ma phase folds. Secondary faults associated with this flexure have created a "shark tooth" array, an expression of en echelon offsets of the eastern margin of the Gregory Rift in a transtensional stress regime: hinge zones where major faults intersect on the eastern shoulder feature intense box faulting and ramp structures which have counterparts in the rift

  14. Chronostratigraphy of the Miocene-Pliocene Sagantole Formation, Middle Awash Valley, Afar rift, Ethiopia

    SciTech Connect

    Renne, P.R. |; WoldeGabriel, G.; Heiken, G.; Hart, W.K.; White, T.D.

    1999-06-01

    The Sagantole Formation comprises more than 200 m of lacustrine, alluvial, and volcaniclastic sediments, plus compositionally bimodal tephras and basaltic lavas, exposed in a domelike horst named the Central Awash Complex in the southwestern Afar rift of Ethiopia. The Sagantole Formation is widely known for abundant vertebrate faunas, including the 4.4 Ma primitive hominid Ardipithecus ramidus. New lithostratigraphic data are used to subdivide the Sagantole Formation into the Kuseralee, Gawto, Haradaso, Aramis, Beidareem, Adgantole, and Belohdelie Members, in ascending order. The members are defined on the basis of lithologic differences and laterally continuous bounding tephras. {sup 40}Ar/{sup 39}Ar dating of 12 intercalated volcanic units firmly establishes the age of the Sagantole Formation to be 5.6 to 3.9 Ma, significantly older than previous proposals based on erroneous correlations. Magnetostratigraphic data reveal eight paleomagnetic polarity zones, which can be correlated unambiguously with the Thvera, Sidufjall, Nunivak, and Cochiti Subchrons of the Gilbert Chron. Thus, by reference to the geomagnetic polarity time scale, seven additional chronological datums can be placed in the Sagantole Formation. With a total of 19 such datums, the age resolution anywhere in the Sagantole Formation is better than {+-}100 k.y., making this the best-dated Miocene-Pliocene succession in Africa.

  15. The seismotectonics of Southeastern Tanzania: Implications for the propagation of the eastern branch of the East African Rift

    NASA Astrophysics Data System (ADS)

    Mulibo, Gabriel D.; Nyblade, Andrew A.

    2016-04-01

    Seismicity patterns and focal mechanisms in southeastern Tanzania, determined from data recorded on temporary and permanent AfricaArray seismic stations, have been used to investigate the propagation direction of the Eastern branch of the East African Rift System southward from the Northern Tanzania Divergence Zone (NTDZ). Within the NTDZ, the rift zone is defined by three segments, the Eyasi segment to the west, the Manyara segment in the middle, and the Pangani segment to the east. Results show that most of the seismicity (~ 75%) extends to the south of the Manyara segment along the eastern margin of the Tanzania Craton, and at ~ 6-7° S latitude trends to the SE along the northern boundary of the Ruvuma microplate, connecting with a N-S zone of seismicity offshore southern Tanzania and Mozambique. A lesser amount of seismicity (~ 25%) is found extending from the SE corner of the Tanzania Craton at ~ 6-7° S latitude southwards towards Lake Nyasa. This finding supports a model of rift propagation via the Manyara segment to the southeast of the Tanzania Craton along the northern boundary of the Ruvuma microplate. However, given the limited duration of the seismic recordings used in this study, the possibility of another zone of extension developing to the south towards Lake Nyasa (Malawi) cannot be ruled out. Focal mechanisms along the boundary between the Victoria and the Ruvuma microplates and offshore southeastern Tanzania show a combination of normal and strike slip faulting indicating mainly extension with some sinistral motion, consistent with the mapped geologic faults and a clockwise rotation of the Ruvuma microplate.

  16. Volcanic Centers in the East African Rift: Imaging Volcanic Processes with Long-Period Event Identification and Ambient Noise Tomography

    NASA Astrophysics Data System (ADS)

    Patlan, E.; Wamalwa, A. M.; Hardy, S.; Kaip, G.; Velasco, A. A.

    2014-12-01

    Kenya actively seeks to produce geothermal energy, and the country lies within the East African Rift System (EARS). The EARS, an active continental rift zone, appears to be a developing tectonic plate boundary and thus, has a number of active as well as dormant volcanoes through its extent. These volcanic centers can be used as potential sources for geothermal energy. The University of Texas at El Paso (UTEP) and the Geothermal Development Company (GDC) began collaborating to monitor several volcanic centers, which have included passive seismic sensor deployments experiment. A number of seismological techniques will be applied to the data being collected at the four volcanic centers: Menengai, Silali, and Paka, and Korosi. In particular, we will identify long-period signals and tremor local using a time-reversal approach. Low-frequency earthquakes are interpreted as magma passing through conduits of the magma chamber and/or fluid being transported as a function of magma movement or hydrothermal activity. The time-reversal locations will help identify the margin of the volcano and caldera, and faults that could form conduits for fluids. We will also perform ambient noise tomography to image the magma chamber and the conduit feeding the volcanoes. The combination of the velocity snapshots of the magma chamber, low-frequency events, and long period events will help us interpret the activity of the calderas and volcanoes. Overall, all these techniques will help us understand magma movement and volcanic processes in the region.

  17. He-Ne-Ar isotope studies of mafic volcanic rocks and mantle xenoliths from the East African Rift System - contrasting isotope signals in different rift branches

    NASA Astrophysics Data System (ADS)

    Halldorsson, S. A.; Hilton, D. R.; Scarsi, P.; Abebe, T.; Massi, K. M.; Barry, P. H.; Fischer, T. P.; de Moor, J.; Rudnick, R. L.

    2010-12-01

    Helium isotope studies of the East African Rift System (EARS) suggest the involvement of a deep mantle plume(s) beneath the northern (Ethiopian) segment [1-3]. The highest 3He/4He (RA) signatures found to date show a close association with the greatest magma volumes erupted since the Early Cenozoic in the region. While the helium isotope characteristics are well established in the Ethiopia-Afar region, Ne and Ar systematics remain poorly constrained. Using a combined He-Ne-Ar isotope approach, our aim is to determine the regional extent of the influence of the Afar plume and to distinguish between subcontinental lithospheric mantle (SCLM) and/or a possible second mantle plume sources located to the south of the Turkana Depression. Xenoliths and mafic lavas from N-Tanzania display a limited range in He isotopes (5-7 RA) with exceptions at Arusha (7.8RA) and Labait (8.7RA), through 7.1-8.7 RA in N-Kenya and S-Ethiopia, to 14.3 RA in the Main Ethiopian Rift and Afar, spanning nearly the entire range of previously reported values. The mean 3He/4He ratio from of lavas and xenoliths from N-Tanzania is remarkably close to the global average of 6.1±0.9 (RA) for continental xenoliths and basalts, thought to represent the SCLM [4]. Thus far, only MORB-like values of 7.3-8.3 RA have been found in volcanics of the Western rift. Initial Ne isotope data reveal the presence of a solar-like Ne component in xenoliths from the Ethiopia-Afar region, with extrapolated 21Ne/22Neex ratios of 0.0365 (assuming Ne-B = 12.5). This trend overlaps that of the Loihi-Kilauea line (L-K). Interestingly, a xenolith from N-Tanzania has a 21Ne/22Neex ratio of 0.0415, falling on a trajectory intermediate between MORB and L-K. The highest 40Ar/36Ar ratio obtained on phenocrysts/xenoliths to date is 1510. The generally low 3He/4He ratios of N-Tanzania likely result from different mixing proportions of asthenospheric sources with lithospheric material, the latter having developed lower 3He/4He ratios

  18. The Ngorongoro Volcanic Highland and its relationships to volcanic deposits at Olduvai Gorge and East African Rift volcanism.

    PubMed

    Mollel, Godwin F; Swisher, Carl C

    2012-08-01

    The Ngorongoro Volcanic Highland (NVH), situated adjacent and to the east of Olduvai Gorge in northern Tanzania, is the source of the immense quantities of lava, ignimbrite, air fall ash, and volcaniclastic debris that occur interbedded in the Plio-Pleistocene sedimentary deposits in the Laetoli and Olduvai areas. These volcanics have proven crucial to unraveling stratigraphic correlations, the age of these successions, the archaeological and paleontological remains, as well as the source materials from which the bulk of the stone tools were manufactured. The NVH towers some 2,000 m above the Olduvai and Laetoli landscapes, affecting local climate, run-off, and providing varying elevation - climate controlled ecosystem, habitats, and riparian corridors extending into the Olduvai and Laetoli lowlands. The NVH also plays a crucial role in addressing the genesis and history of East African Rift (EAR) magmatism in northern Tanzania. In this contribution, we provide age and petrochemical compositions of the major NVH centers: Lemagurut, basalt to benmorite, 2.4-2.2 Ma; Satiman, tephrite to phonolite, 4.6-3.5 Ma; Oldeani, basalt to trachyandesite, 1.6-1.5 Ma; Ngorongoro, basalt to rhyolite, 2.3-2.0 Ma; Olmoti, basalt to trachyte, 2.0-1.8 Ma; Embagai, nephelinite to phonolite, 1.2-0.6 Ma; and Engelosin, phonolite, 3-2.7 Ma. We then discuss how these correlate in time and composition with volcanics preserved at Olduvai Gorge. Finally, we place this into context with our current understanding as to the eruptive history of the NVH and relationship to East African Rift volcanism. PMID:22404967

  19. The Thermal History of the East African Rift Lakes Region Since the Last Glacial Maximum Using TEX86 Paleothermometry

    NASA Astrophysics Data System (ADS)

    Berke, M. A.; Johnson, T. C.; Werne, J. P.; Schouten, S.; Sinninghe Damsté, J. S.

    2008-12-01

    We present preliminary results from a study using the TEX86 temperature proxy from sediments of East African Rift Lakes (including Lakes Turkana, Albert, and Malawi) to reconstruct the thermal history of tropical Africa for the last ~ 20,000 years at a subcentennial to multicentennial resolution. The TEX86 proxy, based on tetraether membrane lipids produced by lacustrine Crenarchaeota, has been shown to be successful at recording lake surface temperatures of some large lakes, including Lakes Malawi and Tanganyika, while providing unreasonable surface temperatures for lakes that receive a large input of soil material. The East African Rift Lakes are climatically sensitive, with the majority of water loss due to evaporation rather than outflow. Thus, they are useful for paleoclimate studies, being sensitive to even small changes in aridity. Temperature records from the northern and central basins of Lake Malawi agree well and fall within modern surface lake temperatures. A 2.5°C cooling is evident during the Younger Dryas in the northern basin record, with no response seen in the central basin. We are currently investigating mechanisms to explain why both records show a gradual cooling of 3°C during the late Holocene. Lake Albert shows an intriguing two-step cooling during the Younger Dryas, reaching temperatures 2.5°C lower than temperatures preceding or following this interval. The temperature record of Lake Turkana shows an interesting ~ 500 year cyclicity of low temperatures punctuated by abrupt warming events. Lakes Turkana and Albert show TEX86 paleotemperatures considerably lower (8°C cooler in Lake Albert and ~ 4°C cooler in Lake Turkana) than modern surface water temperatures. Although these records appear to fall in the range of temporal variability, these temperature discrepancies may indicate varying Crenarcheotal populations between lakes or other influencing factors.

  20. Crustal Structure of the Ethiopian Rift and Adjacent Plateaus: Results of new integrated interpretation

    NASA Astrophysics Data System (ADS)

    Tadesse, K.; Keller, G. R.

    2006-12-01

    The Ethiopian rift is the large part of the East African Rift system, which represents an incipient divergent plate boundary. This important structure provides excellent opportunities to study the transition from continental to oceanic. As a result, geophysical data are becoming increasingly available but some results are contradictory. We used a newly enhanced gravity database and seismic information to produce an integrated interpretation of the crustal structure beneath the Ethiopian rift and the adjacent plateaus. Wide regions have been covered to assess the regional structures including the Kenyan and Ethiopian rifts and the area covered by the Ethiopian flood basalt. Broad negative Bouguer gravity anomalies are delineated over the Ethiopian Plateaus and the Kenyan dome. Residual gravity anomalies, which parallel the major border faults clearly highlight the segregation between the plateaus and the rift valleys. Results of other filtering techniques have clearly revealed individual volcanic centers within the rift valleys. Positive gravity anomalies outside the rift valleys may be associated with older structures, shield volcanoes, or structures that are related to the initiation and propagation of rifting. A long axial profile from the central part of Kenya to the Afar triple junction has been modeled to investigate along-axis crustal variation of the East African rift system, with emphasis on the Ethiopian rift. This modeling has been constrained using seismic refraction data from the Ethiopian Afar Geoscientific Lithospheric Experiment (EAGLE) and Kenya Rift International Seismic Project (KRISP) results. We are able to see a thin crust (~26 km) in the Afar triangle with a gradual thickening (~40 km) southwards towards the Main Central Ethiopian rift (MER). The crust thickness decreases towards Turkana rift (~22 km), and increases again towards the central eastern rift section in Kenya. Our profile model across the MER has revealed that the eastern rift

  1. Thick lithosphere, deep crustal earthquakes and no melt: a triple challenge to understanding extension in the western branch of the East African Rift

    NASA Astrophysics Data System (ADS)

    O'Donnell, J. P.; Selway, K.; Nyblade, A. A.; Brazier, R. A.; Tahir, N. El; Durrheim, R. J.

    2016-02-01

    Geodynamic models predict that rifting of thick, ancient continental lithosphere should not occur unless it is weakened by heating and magmatic intrusion. Therefore, the processes occurring along sections of the western branch of the East African Rift, where ˜150 km thick, Palaeoproterozoic lithosphere is rifting with no surface expression of magmatism, are a significant challenge to understand. In an attempt to understand the apparently amagmatic extension we probed the regional uppermost mantle for signatures of thermal alteration using compressional (Vp) and shear (Vs) wave speeds derived from Pn and Sn tomography. Pervasive thermal alteration of the uppermost mantle and possibly the presence of melt can be inferred beneath the Rungwe volcanic centre, but no signatures on a similar scale were discerned beneath amagmatic portions of the western rift branch encompassing the southern half of the Lake Tanganyika rift and much of the Rukwa rift. In this region, Vp and Vs wave speeds indicate little, if any, heating of the uppermost mantle and no studies have reported dyking. Vp/Vs ratios are consistent with typical, melt-free, olivine-dominated upper mantle. Although our resolution limit precludes us from imaging potential localised magmatic intrusions with dimensions of tens of kilometres, the absence of surface volcanism, the amagmatic upper crustal rupture known to have occurred at disparate locations on the western branch, the presence of lower crustal seismicity and the low temperatures implied by the fast seismic wave speeds in the lower crust and uppermost mantle in this region suggests possible amagmatic extension. Most dynamic models predict that this should not happen. Indeed even with magmatic intrusion, rifting of continental lithosphere >100 km thick is considered improbable under conditions found on Earth. Yield strength envelopes confirm that currently modelled stresses are insufficient to produce the observed deformation along these portions of the

  2. Hydrocarbon accumulation on rifted Continental Margin - examples of oil migration pathways, west African salt basins

    SciTech Connect

    Blackwelder, B.W.

    1989-03-01

    Examination of the oil fields in the Gabon, Lower Congo, and Cuanza basins allows modeling of oil migration and a more accurate ranking of prospects using geologic risk factors. Oil accumulations in these basins are in strata deposited during Cretaceous rift and drift phases, thus providing a diversity of geologic settings to examine. Oil accumulations in rift deposits are located on large faulted anticlines or in truncated units atop horst features. Many of these oil fields were sourced from adjacent organic shales along short direct migration paths. In Areas where source rock is more remote to fields or to prospective structures, faulting and continuity of reservoir rock are important to the migration of hydrocarbons. Because Aptian salts separate rift-related deposits from those of the drift stage, salt evacuation and faulting of the salt residuum are necessary for oil migration from the pre-salt sequences into the post-salt section. Oil migration within post-salt strata is complicated by the presence of salt walls and faulted carbonate platforms. Hydrocarbon shows in wells drilled throughout this area provide critical data for evaluating hydrocarbon migration pathways. Such evaluation in combination with modeling and mapping of the organic-rich units, maturation, reservoir facies, structural configurations, and seals in existing fields allows assessment of different plays. Based on this information, new play types and prospective structures can be ranked with respect to geologic risk.

  3. Shallow, high-resolution velocity structure across the Dead Sea transform fault, Dead Sea rift valley, from Vibroseis data - project DESERT 2000

    NASA Astrophysics Data System (ADS)

    Ryberg, T.; Garfunkel, Z.; Qabbani, I.; El-Kelani, R.

    2001-12-01

    To study the shallowest part of the crust spanning the Dead Sea transform fault (DSF), in the Dead Sea rift valley, tomographic inversion techniques were applied to first-arrival travel times of direct P-waves generated by vibrating trucks. The line was 100 km long, was oriented approximately perpendicular to the DSF (WNW-ESE), and was centered on the DSF. Vibroseis spread length was 18 km. Travel times (250,000) were picked manually for 1700 shots and 180 receivers. The 2-D version of FAST by Zelt and Bartov (1998) was used for the tomographic inversion. Since the inversion is non-unique, extensive testing of model and inversion parameters was carried out. By varying model parameters (block size and shape) and inversion parameters (number of iterations, vertical and horizontal smoothing parameters, choice of reasonable starting models), a stable final velocity model was found. Checkerboard tests indicate that P-wave velocity structure is well resolved down to a depth of several kilometers. The final velocity model shows features that correlate with surface geology and also some buried features. The Dead Sea rift valley is approximately 27 km wide, bounded by inward-facing normal faults at kilometers 40 and 67 on our line. The DSF is located in the center of the rift valley, at kilometer 54, and the east-dipping, normal Zofar fault (ZF) is located on the west side of the valley at kilometer 42. Iso-velocity lines are seen to do the following from west to east across the rift valley. At the western boundary fault, lines <2.5 km/s, corresponding to young sediments, step downward ~200-300 m. At the ZF, lines <3.5 km/s step downward 1 km along a gently east-dipping ramp. Given this iso-velocity line configuration, the block between the western bounding fault and the ZF may be a slump block. At the DSF, iso-velocity lines <2.5 km/s step downward ~100 meters on the edge of the rift valley, but deeper lines, <3.5 km/s, step upward ~100 m, suggesting that there are

  4. Galapagos rift at 86 /sup 0/W: 4. Structure and morphology of hydrothermal fields and their relationship to the volcanic and tectonic processes of the rift valley

    SciTech Connect

    Crane, K.; Ballard, R.D.

    1980-03-10

    The Angus camera system is used to investigate the detailed structure and morphology of the active hydrothermal vent fields of the Galapagos Rift. Precision navigational data are combined with microtopographic information and detailed geological and biological observations obtained from an analysis of the color bottom pictures to create a series of three-dimensional models for each vent field.

  5. Mid-Continent rift system - a frontier hydrocarbon province

    SciTech Connect

    Lee, C.K.; Kerr, S.D. Jr.

    1983-08-01

    Geophysical evidence in the Mid-Continent has led to delineation of a rift system active during the Proterozoic Y Era. The Mid-Continent rift system can be traced by the Mid-Continent gravity high and corresponding aeromagnetic anomaly signature from the surface exposure of the Keweenawan Supergroup in the Lake Superior basin southwest in the subsurface through Wisconsin, Minnesota, Iowa, Nebraska, and Kansas. The aeromagnetic anomaly signature of the rift trend discloses where these sediments have been preserved. Thick accumulations of upper Proterozoic sediments are indicated by both upward continuation of the aeromagnetic profiles across the rift trend and gravity models which incorporate: 1) a deep mafic body to create the narrow gravity high, 2) anomalously thick crust to account for the more regional gravity low, and 3) sedimentary accumulations on the Precambrian surface to explain the small-scale notches which occur within the narrow gravity high. Reflection seismic data are virtually unknown in the rift area; however, data recently acquired by COCORP across the southern end of the feature in Kansas provide evidence of thick stratified sequences in the rift valley. Studies of the East African rift have revealed that the tropical rift valley is an exceptionally fertile environment for deposition and preservation of kerogenous material. The Sirte, Suez, Viking, Dnieper-Donetz, and Tsaidam basins are just a few of the rift basins currently classed as giant producers. The existence of a rift basin trend with thick accumulations of preserved sediments, demonstrably organic rich, introduces the northern Mid-Continent US as a new frontier for hydrocarbon exploration.

  6. Volatile Chemistry of the 2007 to Present Explosive Eruption of Oldoinyo Lengai Volcano, East African Rift

    NASA Astrophysics Data System (ADS)

    de Moor, J.; Fischer, T. P.; King, P. L.; Sharp, Z.; Shaw, A. M.; Mangasini, F.

    2008-12-01

    We characterize the volatile chemistry of the ongoing explosive eruption at Oldoinyo Lengai (OL) in the Gregory Rift Valley of N Tanzania. Fieldwork was conducted from 4-8 April 2008, during which time OL exhibited Strombolian to ash plume-producing activity. Eight distinct ash lapilli layers were sampled 900m from the crater. Mini-DOAS SO2 flux measurements were conducted on 6, 7, and 8 April. Despite moderate eruptive activity, SO2 concentrations were very low, from ~ 20ppm.m to below detection. A low concentration plume was detected on 7 April, allowing a SO2 flux estimate of 0.2-0.4 tons/day. SIMS analyses of carbonatite lavas erupted in 2005 show very high S concentrations (0.62wt %), suggesting that the low SO2 flux is due to partitioning of S into the melt. Ash leachates were analyzed as a proxy for plume chemistry and to assess health risks associated with mobile elements in the ashes. The solutions had high pH of 10.6 to 11.1. This has implications for pH fluctuations of Lake Natron (pH ~10; located 20km N of the crater), which may correlate with lacustrine ash deposition during passed explosive activity at OL. In the uppermost ash layer (deposited on 4/5/2008; not influenced by rain) dominant mobile ions are Cl (18120mg/kg), SO4 (26616mg/kg), PO4 (2393mg/kg), and F (534mg/kg), Na (101679mg/kg), K (22544mg/kg), Ca (721mg/kg), and Si (189mg/kg). Leachate S/Cl from this pristine ash is 0.49, compared to 0.29 measured by SIMS in lavas from 2005. Using the SO2 flux and the S/Cl in the leachates, the Cl flux was 0.5-0.8 tons/day. High concentrations of leachable ions, particularly F, on ash presents health hazards (F poisoning; water source contamination) to local communities. Concentrations in the underlying ashes are lower (40-129 mg/kg Cl, 965-3223 mg/kg SO4 , 66-104 mg/kg F, 40-335 mg/kg PO4 ) than those in the upper deposit due to leaching by rain prior to deposition of the uppermost ash layer. FTIR spectroscopy of ashes shows at least two carbonate

  7. Antiphasing Between Rainfall in Africa's Rift Valley and North America's Great Basin

    NASA Technical Reports Server (NTRS)

    Broecker, Wallace S.; Pettet, Dorothy; Hajdas, Irena; Lin, Jo; Clark, Elizabeth

    1998-01-01

    The beginning of the Bolling-Allerod warm period is marked in Greenland ice by an abrupt rise in (Delta)O-18, an abrupt drop in dust rain, and an abrupt increase in atmospheric methane content. The surface waters in the Norwegian Sea underwent a simultaneous abrupt warming. At about this time, a major change in the pattern of global rainfall occurred. Lake Victoria (latitude 0deg), which prior to this time was dry, was rejuvenated. The Red Sea, which prior to this time was hypersaline, freshened. Lake Lahontan, which prior to this time had achieved its largest size, desiccated. Whereas the chronologic support for the abruptness of the hydrologic changes is firm only for the Red Sea, in keeping with evidence obtained well away from the nor-them Atlantic in the Santa Barbara basin and the Cariaco Trench, the onset and end of the millennial-duration climate events were globally abrupt. If so, the proposed linkage between the size of African closed basin lakes and insolation cycles must be reexamined.

  8. Simulation Modelling of Population Dynamics of Mosquito Vectors for Rift Valley Fever Virus in a Disease Epidemic Setting

    PubMed Central

    Mweya, Clement N.; Holst, Niels; Mboera, Leonard E. G.; Kimera, Sharadhuli I.

    2014-01-01

    Background Rift Valley Fever (RVF) is weather dependent arboviral infection of livestock and humans. Population dynamics of mosquito vectors is associated with disease epidemics. In our study, we use daily temperature and rainfall as model inputs to simulate dynamics of mosquito vectors population in relation to disease epidemics. Methods/Findings Time-varying distributed delays (TVDD) and multi-way functional response equations were implemented to simulate mosquito vectors and hosts developmental stages and to establish interactions between stages and phases of mosquito vectors in relation to vertebrate hosts for infection introduction in compartmental phases. An open-source modelling platforms, Universal Simulator and Qt integrated development environment were used to develop models in C++ programming language. Developed models include source codes for mosquito fecundity, host fecundity, water level, mosquito infection, host infection, interactions, and egg time. Extensible Markup Language (XML) files were used as recipes to integrate source codes in Qt creator with Universal Simulator plug-in. We observed that Floodwater Aedines and Culicine population continued to fluctuate with temperature and water level over simulation period while controlled by availability of host for blood feeding. Infection in the system was introduced by floodwater Aedines. Culicines pick infection from infected host once to amplify disease epidemic. Simulated mosquito population show sudden unusual increase between December 1997 and January 1998 a similar period when RVF outbreak occurred in Ngorongoro district. Conclusion/Significance Findings presented here provide new opportunities for weather-driven RVF epidemic simulation modelling. This is an ideal approach for understanding disease transmission dynamics towards epidemics prediction, prevention and control. This approach can be used as an alternative source for generation of calibrated RVF epidemics data in different settings

  9. Interacting Factors That Influence Long-term Storage of Live Pasteurella tularensis Vaccine and Rift Valley Fever Virus

    PubMed Central

    Klein, Frederick; Walker, Jerry S.; Mahlandt, Bill G.; Carter, Richard C.; Orlando, Michael D.; Weirether, Francis J.; Lincoln, Ralph E.

    1969-01-01

    Studies were conducted on the interaction of various parameters which affect the storage stability and growth potential of liquid cultures of Pasteurella tularensis live vaccine strain (LVS) and Rift Valley fever virus Van Wyk strain (RVFV). Storage variables studied with LVS included four storage temperatures (4, -20, -65, -175 C), single and multiple freeze-thaw cycles, two freezing and two thawing rates (slow and fast), various inoculum levels (1, 3, 5, and 10%) for the determination of growth potential, and the retention of immunizing potential (mice and guinea pig) after storage. Neither the freezing rate nor the number of freeze-thaw cycles seriously affected the growth of LVS after storage at -175C; however, the slow rate of thaw proved deleterious as were all temperatures of storage except -175 C after 1 year of storage, as shown by both criteria of evaluation. RVFV produced in two combinations of cell lines and media (LM cell line-199 peptone medium and LDR cell line-Eagle's minimum essential medium) was stored at three serum levels (10, 20, 40%), three pH values (6.2., 7.0, 7.8), and three temperatures (-20, -65, -175 C). These studies indicated: (i) virus produced in the LDR cell line and Eagle's medium was more stable than that produced in the LM cell line and 199 peptone medium for either short- or long-term storage; (ii) serum levels did not affect stability; and (iii) low pH resulted in losses during long-term storage under all conditions tested. Thus, cryogenic storage is advantageous for stock culture maintenance of bacteria and viruses and for other similar applications. PMID:5780399

  10. Identifying landscape features associated with Rift Valley fever virus transmission, Ferlo region, Senegal, using very high spatial resolution satellite imagery

    PubMed Central

    2013-01-01

    Introduction Dynamics of most of vector-borne diseases are strongly linked to global and local environmental changes. Landscape changes are indicators of human activities or natural processes that are likely to modify the ecology of the diseases. Here, a landscape approach developed at a local scale is proposed for extracting mosquito favourable biotopes, and for testing ecological parameters when identifying risk areas of Rift Valley fever (RVF) transmission. The study was carried out around Barkedji village, Ferlo region, Senegal. Methods In order to test whether pond characteristics may influence the density and the dispersal behaviour of RVF vectors, and thus the spatial variation in RVFV transmission, we used a very high spatial resolution remote sensing image (2.4 m resolution) provided by the Quickbird sensor to produce a detailed land-cover map of the study area. Based on knowledge of vector and disease ecology, seven landscape attributes were defined at the pond level and computed from the land-cover map. Then, the relationships between landscape attributes and RVF serologic incidence rates in small ruminants were analyzed through a beta-binomial regression. Finally, the best statistical model according to the Akaike Information Criterion corrected for small samples (AICC), was used to map areas at risk for RVF. Results Among the derived landscape variables, the vegetation density index (VDI) computed within a 500 m buffer around ponds was positively correlated with serologic incidence (p<0.001), suggesting that the risk of RVF transmission was higher in the vicinity of ponds surrounded by a dense vegetation cover. The final risk map of RVF transmission displays a heterogeneous spatial distribution, corroborating previous findings from the same area. Conclusions Our results highlight the potential of very high spatial resolution remote sensing data for identifying environmental risk factors and mapping RVF risk areas at a local scale. PMID:23452759

  11. A need for One Health approach – lessons learned from outbreaks of Rift Valley fever in Saudi Arabia and Sudan

    PubMed Central

    Hassan, Osama Ahmed; Ahlm, Clas; Evander, Magnus

    2014-01-01

    Introduction Rift Valley fever (RVF) is an emerging viral zoonosis that impacts human and animal health. It is transmitted from animals to humans directly through exposure to blood, body fluids, or tissues of infected animals or via mosquito bites. The disease is endemic to Africa but has recently spread to Saudi Arabia and Yemen. Our aim was to compare two major outbreaks of RVF in Saudi Arabia (2000) and Sudan (2007) from a One Health perspective. Methods Using the terms ‘Saudi Arabia’, ‘Sudan’, and ‘RVF’, articles were identified by searching PubMed, Google Scholar, and web pages of international organizations as well as local sources in Saudi Arabia and Sudan. Results The outbreak in Saudi Arabia caused 883 human cases, with a case fatality rate of 14% and more than 40,000 dead sheep and goats. In Sudan, 698 human cases of RVF were recognized (case fatality, 31.5%), but no records of affected animals were available. The ecology and environment of the affected areas were similar with irrigation canals and excessive rains providing an attractive habitat for mosquito vectors to multiply. The outbreaks resulted in livestock trade bans leading to a vast economic impact on the animal market in the two countries. The surveillance system in Sudan showed a lack of data management and communication between the regional and federal health authorities, while in Saudi Arabia which is the stronger economy, better capacity and contingency plans resulted in efficient countermeasures. Studies of the epidemiology and vectors were also performed in Saudi Arabia, while in Sudan these issues were only partly studied. Conclusion We conclude that a One Health approach is the best option to mitigate outbreaks of RVF. Collaboration between veterinary, health, and environmental authorities both on national and regional levels is needed. PMID:24505511

  12. Knowledge, Attitudes and Practices (KAP) on Rift Valley Fever among Pastoralist Communities of Ijara District, North Eastern Kenya

    PubMed Central

    Abdi, Ismail H.; Affognon, Hippolyte D.; Wanjoya, Anthony K.; Onyango-Ouma, Washington; Sang, Rosemary

    2015-01-01

    Outbreaks of Rift Valley fever (RVF), a mosquito-borne viral zoonosis, have previously been associated with unusually heavy rainfall and extensive flooding. The disease is a serious public health problem in Africa and the Middle East, and is a potential global health threat. In Kenya, outbreaks of the disease have disproportionately affected impoverished pastoralist communities. This study sought to assess the knowledge, attitudes and practices (KAP) regarding RVF among the pastoralists of North Eastern Kenya, and to establish the determinants of KAP on RVF. A cross-sectional study involving 392 pastoralists living in Ijara district (Masalani and Ijara wards) was carried out using an interview questionnaire. All respondents interviewed (100%) had heard about RVF disease. They recognized that the disease is dangerous (99%), and had a positive attitude towards vaccination of animals (77%). However, few respondents knew that abortion (11%) and high mortality of young animals (10%) were key signs of RVF in animals. Very few (4%) use any form of protection when handling sick animals to avoid infection. Significant factors associated with knowledge were being in a household with a history of RVF infection (OR = 1.262, 95% CI = 1.099–1.447), having more livestock (OR = 1.285, 95% CI = 1.175–1.404) and the place of residence, Masalani (OR = 0.526, 95% CI = 0.480–0.576). Overall knowledge score on RVF was found to be a significant predictor of good preventive practice of the disease (OR = 1.073, 95% CI = 1.047–1.101). Despite the positive attitude that pastoralist communities have towards the prevention of RVF, there exist gaps in knowledge and good practices on the disease. Therefore there is need for public health education to address these gaps, and to identify and facilitate the removal of barriers to behavioural change related to the prevention of RVF. PMID:26566218

  13. Integrated Analysis of Environment, Cattle and Human Serological Data: Risks and Mechanisms of Transmission of Rift Valley Fever in Madagascar

    PubMed Central

    Olive, Marie-Marie; Chevalier, Véronique; Grosbois, Vladimir; Tran, Annelise; Andriamandimby, Soa-Fy; Durand, Benoit; Ravalohery, Jean-Pierre; Andriamamonjy, Seta; Rakotomanana, Fanjasoa; Rogier, Christophe; Heraud, Jean-Michel

    2016-01-01

    Background Rift Valley fever (RVF) is a vector-borne disease affecting ruminants and humans. Madagascar was heavily affected by RVF in 2008–2009, with evidence of a large and heterogeneous spread of the disease. The identification of at-risk environments is essential to optimize the available resources by targeting RVF surveillance in Madagascar. Herein, the objectives of our study were: (i) to identify the environmental factors and areas favorable to RVF transmission to both cattle and human and (ii) to identify human behaviors favoring human infections in Malagasy contexts. Methodology/Principal Findings First, we characterized the environments of Malagasy communes using a Multiple Factor Analysis (MFA). Then, we analyzed cattle and human serological data collected at national level using Generalized Linear Mixed Models, with the individual serological status (cattle or human) as the response, and MFA factors, as well as other potential risk factors (cattle density, human behavior) as explanatory variables. Cattle and human seroprevalence rates were positively associated to humid environments (p<0.001). Areas with high cattle density were at risk (p<0.01; OR = 2.6). Furthermore, our analysis showed that frequent contact with raw milk contributed to explain human infection (OR = 1.6). Finally, our study highlighted the eastern-coast, western and north-western parts as high-risk areas for RVF transmission in cattle. Conclusions/Significance Our integrated approach analyzing environmental, cattle and human datasets allow us to bring new insight on RVF transmission patterns in Madagascar. The association between cattle seroprevalence, humid environments and high cattle density suggests that concomitant vectorial and direct transmissions are critical to maintain RVF enzootic transmission. Additionally, in the at-risk humid environment of the western, north-western and the eastern-coast areas, suitable to Culex and Anopheles mosquitoes, vectorial transmission

  14. TerraSAR-X high-resolution radar remote sensing: an operational warning system for Rift Valley fever risk.

    PubMed

    Vignolles, Cécile; Tourre, Yves M; Mora, Oscar; Imanache, Laurent; Lafaye, Murielle

    2010-11-01

    In the vicinity of the Barkedji village (in the Ferlo region of Senegal), the abundance and aggressiveness of the vector mosquitoes for Rift Valley fever (RVF) are strongly linked to rainfall events and associated ponds dynamics. Initially, these results were obtained from spectral analysis of high-resolution (~10 m) Spot-5 images, but, as a part of the French AdaptFVR project, identification of the free water dynamics within ponds was made with the new high-resolution (down to 3-meter pixels), Synthetic Aperture Radar satellite (TerraSAR-X) produced by Infoterra GmbH, Friedrichshafen/Potsdam, Germany. During summer 2008, within a 30 x 50 km radar image, it was found that identified free water fell well within the footprints of ponds localized by optical data (i.e. Spot-5 images), which increased the confidence in this new and complementary remote sensing technique. Moreover, by using near real-time rainfall data from the Tropical Rainfall Measuring Mission (TRMM), NASA/JAXA joint mission, the filling-up and flushing-out rates of the ponds can be accurately determined. The latter allows for a precise, spatio-temporal mapping of the zones potentially occupied by mosquitoes capable of revealing the variability of pond surfaces. The risk for RVF infection of gathered bovines and small ruminants (~1 park/km(2)) can thus be assessed. This new operational approach (which is independent of weather conditions) is an important development in the mapping of risk components (i.e. hazards plus vulnerability) related to RVF transmission during the summer monsoon, thus contributing to a RVF early warning system. PMID:21080318

  15. Knowledge, Attitudes and Practices (KAP) on Rift Valley Fever among Pastoralist Communities of Ijara District, North Eastern Kenya.

    PubMed

    Abdi, Ismail H; Affognon, Hippolyte D; Wanjoya, Anthony K; Onyango-Ouma, Washington; Sang, Rosemary

    2015-11-01

    Outbreaks of Rift Valley fever (RVF), a mosquito-borne viral zoonosis, have previously been associated with unusually heavy rainfall and extensive flooding. The disease is a serious public health problem in Africa and the Middle East, and is a potential global health threat. In Kenya, outbreaks of the disease have disproportionately affected impoverished pastoralist communities. This study sought to assess the knowledge, attitudes and practices (KAP) regarding RVF among the pastoralists of North Eastern Kenya, and to establish the determinants of KAP on RVF. A cross-sectional study involving 392 pastoralists living in Ijara district (Masalani and Ijara wards) was carried out using an interview questionnaire. All respondents interviewed (100%) had heard about RVF disease. They recognized that the disease is dangerous (99%), and had a positive attitude towards vaccination of animals (77%). However, few respondents knew that abortion (11%) and high mortality of young animals (10%) were key signs of RVF in animals. Very few (4%) use any form of protection when handling sick animals to avoid infection. Significant factors associated with knowledge were being in a household with a history of RVF infection (OR = 1.262, 95% CI = 1.099-1.447), having more livestock (OR = 1.285, 95% CI = 1.175-1.404) and the place of residence, Masalani (OR = 0.526, 95% CI = 0.480-0.576). Overall knowledge score on RVF was found to be a significant predictor of good preventive practice of the disease (OR = 1.073, 95% CI = 1.047-1.101). Despite the positive attitude that pastoralist communities have towards the prevention of RVF, there exist gaps in knowledge and good practices on the disease. Therefore there is need for public health education to address these gaps, and to identify and facilitate the removal of barriers to behavioural change related to the prevention of RVF. PMID:26566218

  16. Inter-epidemic abundance and distribution of potential mosquito vectors for Rift Valley fever virus in Ngorongoro district, Tanzania

    PubMed Central

    Mweya, Clement N.; Kimera, Sharadhuli I.; Mellau, Lesakit S. B.; Mboera, Leonard E. G.

    2015-01-01

    Background Rift Valley fever (RVF) is a mosquito-borne viral zoonosis that primarily affects ruminants but also has the capacity to infect humans. Objective To determine the abundance and distribution of mosquito vectors in relation to their potential role in the virus transmission and maintenance in disease epidemic areas of Ngorongoro district in northern Tanzania. Methods A cross-sectional entomological investigation was carried out before the suspected RVF outbreak in October 2012. Mosquitoes were sampled both outdoors and indoors using the Centre for Disease Control (CDC) light traps and Mosquito Magnets baited with attractants. Outdoor traps were placed in proximity with breeding sites and under canopy in banana plantations close to the sleeping places of animals. Results A total of 1,823 mosquitoes were collected, of which 87% (N=1,588) were Culex pipiens complex, 12% (N=226) Aedes aegypti, and 0.5% (N=9) Anopheles species. About two-thirds (67%; N=1,095) of C. pipiens complex and nearly 100% (N=225) of A. aegypti were trapped outdoors using Mosquito Magnets. All Anopheles species were trapped indoors using CDC light traps. There were variations in abundance of C. pipiens complex and A. aegypti among different ecological and vegetation habitats. Over three quarters (78%) of C. pipiens complex and most (85%) of the A. aegypti were trapped in banana and maize farms. Both C. pipiens complex and A. aegypti were more abundant in proximity with cattle and in semi-arid thorn bushes and lower Afro-montane. The highest number of mosquitoes was recorded in villages that were most affected during the RVF epidemic of 2007. Of the tested 150 pools of C. pipiens complex and 45 pools of A. aegypti, none was infected with RVF virus. Conclusions These results provide insights into unique habitat characterisation relating to mosquito abundances and distribution in RVF epidemic-prone areas of Ngorongoro district in northern Tanzania. PMID:25613346

  17. Development and characterization of a Rift Valley fever virus cell-cell fusion assay using alphavirus replicon vectors

    SciTech Connect

    Filone, Claire Marie; Heise, Mark; Doms, Robert W. . E-mail: doms@mail.med.upenn.edu; Bertolotti-Ciarlet, Andrea . E-mail: aciarlet@mail.med.upenn.edu

    2006-12-20

    Rift Valley fever virus (RVFV), a member of the Phlebovirus genus in the Bunyaviridae family, is transmitted by mosquitoes and infects both humans and domestic animals, particularly cattle and sheep. Since primary RVFV strains must be handled in BSL-3+ or BSL-4 facilities, a RVFV cell-cell fusion assay will facilitate the investigation of RVFV glycoprotein function under BSL-2 conditions. As for other members of the Bunyaviridae family, RVFV glycoproteins are targeted to the Golgi, where the virus buds, and are not efficiently delivered to the cell surface. However, overexpression of RVFV glycoproteins using an alphavirus replicon vector resulted in the expression of the glycoproteins on the surface of multiple cell types. Brief treatment of RVFV glycoprotein expressing cells with mildly acidic media (pH 6.2 and below) resulted in rapid and efficient syncytia formation, which we quantified by {beta}-galactosidase {alpha}-complementation. Fusion was observed with several cell types, suggesting that the receptor(s) for RVFV is widely expressed or that this acid-dependent virus does not require a specific receptor to mediate cell-cell fusion. Fusion occurred over a broad temperature range, as expected for a virus with both mosquito and mammalian hosts. In contrast to cell fusion mediated by the VSV-G glycoprotein, RVFV glycoprotein-dependent cell fusion could be prevented by treating target cells with trypsin, indicating that one or more proteins (or protein-associated carbohydrate) on the host cell surface are needed to support membrane fusion. The cell-cell fusion assay reported here will make it possible to study the membrane fusion activity of RVFV glycoproteins in a high-throughput format and to screen small molecule inhibitors for the ability to block virus-specific membrane fusion.

  18. Exposure of sheep to mosquito bites: possible consequences for the transmission risk of Rift Valley Fever in Senegal.

    PubMed

    Chevalier, V; Mondet, B; Diaite, A; Lancelot, R; Fall, A G; Ponçon, N

    2004-09-01

    Rift Valley Fever (RVF) is a growing health problem in West Africa. In northern Senegal, the candidate vectors of this arbovirosis are Aedes (Aedimorphus) vexans Meigen and Culex (Culex) poicilipes Theobald (Diptera: Culicidae). Domestic ruminants are the reservoirs of the virus. A study was undertaken during the 2002 rainy season to assess spatial and temporal variations in exposure to mosquito bites in sheep herds, and to evaluate the possible consequences on the risk of RVF transmission to sheep. Mosquitoes were collected with sheep-baited traps. The number of Ae. vexans females (the predominant species during the 2002 rainy season) trapped per trap-night was the dependent variable in statistical analyses. The trapping periods were divided into six series of two to five consecutive days, from July to November 2002. Three temporary ponds were selected according to their ecological features: depth, bank slope, size and vegetation cover. Traps were laid on the pond bank and in the nearest available compound, close to the sheep night pen. Data were analysed using mixed-effects Poisson models. The explanatory variables were the trapping period, the pond, and the capture site. The exposure to mosquito bites varied according to the pond type, suggesting that the risk of transmission was spatially heterogeneous. However, there was no obvious trend in transmission risk due to the effect of the distance from the compound to the pond. The period with the highest exposure was in October, i.e. when transhumant herds left the Ferlo to relocate to their dry-season settlement. It is thus hypothesized that transhumance, the seasonal movements of herds, plays a significant role in the dissemination of RVF virus in the region. PMID:15347392

  19. Association of Symptoms and Severity of Rift Valley Fever with Genetic Polymorphisms in Human Innate Immune Pathways

    PubMed Central

    Hise, Amy G.; Traylor, Zachary; Hall, Noémi B.; Sutherland, Laura J.; Dahir, Saidi; Ermler, Megan E.; Muiruri, Samuel; Muchiri, Eric M.; Kazura, James W.; LaBeaud, A. Desirée; King, Charles H.; Stein, Catherine M.

    2015-01-01

    Background Multiple recent outbreaks of Rift Valley Fever (RVF) in Africa, Madagascar, and the Arabian Peninsula have resulted in significant morbidity, mortality, and financial loss due to related livestock epizootics. Presentation of human RVF varies from mild febrile illness to meningoencephalitis, hemorrhagic diathesis, and/or ophthalmitis with residual retinal scarring, but the determinants for severe disease are not understood. The aim of the present study was to identify human genes associated with RVF clinical disease in a high-risk population in Northeastern Province, Kenya. Methodology/Principal Findings We conducted a cross-sectional survey among residents (N = 1,080; 1–85 yrs) in 6 villages in the Sangailu Division of Ijara District. Participants completed questionnaires on past symptoms and exposures, physical exam, vision testing, and blood collection. Single nucleotide polymorphism (SNP) genotyping was performed on a subset of individuals who reported past clinical symptoms consistent with RVF and unrelated subjects. Four symptom clusters were defined: meningoencephalitis, hemorrhagic fever, eye disease, and RVF-not otherwise specified. SNPs in 46 viral sensing and response genes were investigated. Association was analyzed between SNP genotype, serology and RVF symptom clusters. The meningoencephalitis symptom phenotype cluster among seropositive patients was associated with polymorphisms in DDX58/RIG-I and TLR8. Having three or more RVF-related symptoms was significantly associated with polymorphisms in TICAM1/TRIF, MAVS, IFNAR1 and DDX58/RIG-I. SNPs significantly associated with eye disease included three different polymorphisms TLR8 and hemorrhagic fever symptoms associated with TLR3, TLR7, TLR8 and MyD88. Conclusions/Significance Of the 46 SNPs tested, TLR3, TLR7, TLR8, MyD88, TRIF, MAVS, and RIG-I were repeatedly associated with severe symptomatology, suggesting that these genes may have a robust association with RVFV-associated clinical

  20. Rift Valley Fever Virus Nonstructural Protein NSs Promotes Viral RNA Replication and Transcription in a Minigenome System

    PubMed Central

    Ikegami, Tetsuro; Peters, C. J.; Makino, Shinji

    2005-01-01

    Rift Valley fever virus (RVFV), which belongs to the genus Phlebovirus, family Bunyaviridae, has a tripartite negative-strand genome (S, M, and L segments) and is an important mosquito-borne pathogen for domestic animals and humans. We established an RVFV T7 RNA polymerase-driven minigenome system in which T7 RNA polymerase from an expression plasmid drove expression of RNA transcripts for viral proteins and minigenome RNA transcripts carrying a reporter gene between both termini of the M RNA segment in 293T cells. Like other viruses of the Bunyaviridae family, replication and transcription of the RVFV minigenome required expression of viral N and L proteins. Unexpectedly, the coexpression of an RVFV nonstructural protein, NSs, with N and L proteins resulted in a significant enhancement of minigenome RNA replication. Coexpression of NSs protein with N and L proteins also enhanced minigenome mRNA transcription in the cells expressing viral-sense minigenome RNA transcripts. NSs protein expression increased the RNA replication of minigenomes that originated from S and L RNA segments. Enhancement of minigenome RNA synthesis by NSs protein occurred in cells lacking alpha/beta interferon (IFN-α/β) genes, indicating that the effect of NSs protein on minigenome RNA replication was unrelated to a putative NSs protein-induced inhibition of IFN-α/β production. Our finding that RVFV NSs protein augmented minigenome RNA synthesis was in sharp contrast to reports that Bunyamwera virus (genus Bunyavirus) NSs protein inhibits viral minigenome RNA synthesis, suggesting that RVFV NSs protein and Bunyamwera virus NSs protein have distinctly different biological roles in viral RNA synthesis. PMID:15827175

  1. Rift Valley fever MP-12 vaccine Phase 2 clinical trial: Safety, immunogenicity, and genetic characterization of virus isolates.

    PubMed

    Pittman, Phillip R; Norris, Sarah L; Brown, Elizabeth S; Ranadive, Manmohan V; Schibly, Barbara A; Bettinger, George E; Lokugamage, Nandadeva; Korman, Lawrence; Morrill, John C; Peters, Clarence J

    2016-01-20

    An outbreak or deliberate release of Rift Valley fever (RVF) virus could have serious public health and socioeconomic consequences. A safe RVF vaccine capable of eliciting long-lasting immunity after a single injection is urgently needed. The live attenuated RVF MP-12 vaccine candidate has shown promise in Phase 1 clinical trials; no evidence of reversion to virulence has been identified in numerous animal studies. The objective of this Phase 2 clinical trial was to (a) further examine the safety and immunogenicity of RVF MP-12 in RVF virus-naïve humans and (b) characterize isolates of RVF MP-12 virus recovered from the blood of vaccinated subjects to evaluate the genetic stability of MP-12 attenuation. We found that RVF MP-12 was well tolerated, causing mostly mild reactions that resolved without sequelae. Of 19 subjects, 18 (95%) and 19 (100%) achieved, respectively, 80% and 50% plaque reduction neutralization titers (PRNT80 and PRNT50)≥1:20 by postvaccination day 28. All 18 PRNT80 responders maintained PRNT80 and PRNT50≥1:40 until at least postvaccination month 12. Viremia was undetectable in the plasma of any subject by direct plaque assay techniques. However, 5 of 19 vaccinees were positive for MP-12 isolates in plasma by blind passage of plasma on Vero cells. Vaccine virus was also recovered from buffy coat material from one of those vaccinees and from one additional vaccinee. Through RNA sequencing of MP-12 isolates, we found no reversions of amino acids to those of the parent virulent virus (strain ZH548). Five years after a single dose of RVF MP-12 vaccine, 8 of 9 vaccinees (89%) maintained a PRNT80≥1:20. These findings support the continued development of RVF MP-12 as a countermeasure against RVF virus in humans. PMID:26706271

  2. Dynamic risk model for Rift Valley fever outbreaks in Kenya based on climate and disease outbreak data.

    PubMed

    Gikungu, David; Wakhungu, Jacob; Siamba, Donald; Neyole, Edward; Muita, Richard; Bett, Bernard

    2016-01-01

    Rift Valley fever (RVF) is a mosquito-borne viral zoonotic disease that occurs throughout sub-Saharan Africa, Egypt and the Arabian Peninsula, with heavy impact in affected countries. Outbreaks are episodic and related to climate variability, especially rainfall and flooding. Despite great strides towards better prediction of RVF epidemics, there is still no observed climate data-based warning system with sufficient lead time for appropriate response and mitigation. We present a dynamic risk model based on historical RVF outbreaks and observed meteorological data. The model uses 30-year data on rainfall, temperature, relative humidity, normalised difference vegetation index and sea surface temperature data as predictors. Our research on RVF focused on Garissa, Murang'a and Kwale counties in Kenya using a research design based on a correlational, experimental, and evaluational approach. The weather data were obtained from the Kenya Meteorological Department while the RVF data were acquired from International Livestock Research Institute, and the Department of Veterinary Services. Performance of the model was evaluated by using the first 70% of the data for calibration and the remaining 30% for validation. The assessed components of the model accurately predicted already observed RVF events. The Brier score for each of the models (ranging from 0.007 to 0.022) indicated high skill. The coefficient of determination (R2) was higher in Garissa (0.66) than in Murang'a (0.21) and Kwale (0.16). The discrepancy was attributed to data distribution differences and varying ecosystems. The model outputs should complement existing early warning systems to detect risk factors that predispose for RVF outbreaks. PMID:27245792

  3. Planation surfaces as a record of medium to large wavelength deformation: the example of the Lake Albert Rift (Uganda) on the East African Dome

    NASA Astrophysics Data System (ADS)

    Brendan, Simon; François, Guillocheau; Cécile, Robin; Jean, Braun; Olivier, Dauteuil; Massimo, Dall'Asta

    2016-04-01

    African relief is characterized by planation surfaces, some of them of continental scale. These surfaces are slightly deformed according to different wavelengths (x10 km; x100 km, x1000 km) which record both mantle dynamics (very long wavelength, x 1000 km) and lithosphere deformation (long wavelength deformation, x 100 km). Different types of these planation surfaces are recognized: - Etchplains capped by iron-duricrust which correspond to erosional nearly flat weathered surfaces resulting from the growth of laterites under warm and humid conditions. - Pediments which define mechanical erosional surfaces with concave or rectilinear profiles delimited by upslope scarps connected upstream with the upper landforms. We here focused on the Lake Albert Rift at the northern termination of the western branch of the East African Rift System of which the two branches are surimposed on the East-African Dome. Different wavelengths of deformation were characterized based on the 3D mapping of stepped planation surfaces: (1) very long wavelength deformations resulting from the uplift of the East African Dome; (2) long wavelength deformations resulting from the opening of the eastern branch and (3) medium wavelength deformations represented by the uplift of rift shoulders like the Rwenzori Mountains. The paleo-landscape reconstruction of Uganda shows the existence of four generations of landforms dated according to their geometrical relationships with volcanic rocks. A four stepped evolution of the Ugandan landforms is proposed: • 70 - 22 Ma: generation of two weathered planation surfaces (etchplain Uw and Iw). The upper one (Uw) records a very humid period culminating at time of the Early Eocene Climatic Optimum (70-45 Ma). It corresponds to the African Surface. A first uplift of the East African Dome generates a second lower planation surface (Iw) connected to the Atlantic Ocean base level; • 17-2.7 Ma: planation of large pediplains connected to the local base level induced

  4. East African mid-Holocene wet-dry transition recorded in palaeo-shorelines of Lake Turkana, northern Kenya Rift

    NASA Astrophysics Data System (ADS)

    Garcin, Yannick; Melnick, Daniel; Strecker, Manfred R.; Olago, Daniel; Tiercelin, Jean-Jacques

    2012-05-01

    The 'wet' early to mid-Holocene of tropical Africa, with its enhanced monsoon, ended with an abrupt shift toward drier conditions and was ultimately replaced by a drier climate that has persisted until the present day. The forcing mechanisms, the timing, and the spatial extent of this major climatic transition are not well understood and remain the subject of ongoing research. We have used a detailed palaeo-shoreline record from Lake Turkana (Kenya) to decipher and characterise this marked climatic transition in East Africa. We present a high-precision survey of well-preserved palaeo-shorelines, new radiocarbon ages from shoreline deposits, and oxygen-isotope measurements on freshwater mollusk shells to elucidate the Holocene moisture history from former lake water-levels in this climatically sensitive region. In combination with previously published data our study shows that during the early Holocene the water-level in Lake Turkana was high and the lake overflowed temporarily into the White Nile drainage system. During the mid-Holocene (~ 5270 ± 300 cal. yr BP), however, the lake water-level fell by ~ 50 m, coeval with major episodes of aridity on the African continent. A comparison between palaeo-hydrological and archaeological data from the Turkana Basin suggests that the mid-Holocene climatic transition was associated with fundamental changes in prehistoric cultures, highlighting the significance of natural climate variability and associated periods of protracted drought as major environmental stress factors affecting human occupation in the East African Rift System.

  5. Post-rift uplift, paleorelief and sedimentary fluxes: the case example of the African margin of the South Atlantic

    NASA Astrophysics Data System (ADS)

    Guillocheau, F.; Dauteuil, O.

    2012-04-01

    Several attempts have been made to identify different paleosurfaces since the classical works of Lester King (1942, 1949) at the scale of Africa. Thermochronologists and river geomorphologists criticized this approach. This criticism mainly concerned the age of the surfaces, that were (1) poorly constraints and (2) a king of catechism on which all studies must refer. Nevertheless, those planation surfaces exist and are key features of the present-day morphology of Africa. In details, real planation surfaces are (1) no more than two or three and (2) can be deformed and then merged together. Those surfaces are incised by large smooth valleys, called pediments or glacis (with some semantic differences between English and French-speaking geomorphologists). Those pediments formed a pre-network of rivers, later re-incised by the present-day incised narrow valleys. Those different morphological structures can be dated using (1) their merge with sedimentary basins, (2) their relationship with the different types of dated weathering periods and (3) their relationships with volcanism. They also can be used as a proxy of the deformation based on the differences of elevation of the planations surfaces or on the shape of the pediments. From the Orange River to the Cameroon Volcanic Line, including the Congo Cuvette, two planations surfaces were identified (the Bauxitic or African surface, the intermediate surface), at least two generations of pediment valleys and the present-day incised valley network. The African surface is of Late Paleocene to Middle Eocene age with a climax during this last period and two major periods of uplift can be identified and mapped (1) Late Eocene-Early Oligocene and (2) Lower Miocene. Most of the relief is fossil since that period, excepted in the Angola Mountains were deformations are active during Plio-Pleistocene times. Those uplifts of smoother, most of the time weathered, relief than today, had important consequences on the petrology and the

  6. Geomorphometric reconstruction of post-eruptive surfaces of the Virunga Volcanic Province (East African Rift), constraint of erosion ratio and relative chronology

    NASA Astrophysics Data System (ADS)

    Lahitte, Pierre; Poppe, Sam; Kervyn, Matthieu

    2016-04-01

    Quaternary volcanic landforms result from a complex evolution, involving volcanic constructional events and destructive ones by collapses and long-term erosion. Quantification, by morphometric approaches, of the evolution through time of the volcano shape allows the estimation of relative ages between volcanoes sharing the same climate and eruptive conditions. We apply such method to six volcanoes of the Virunga Volcanic Province in the western branch of the East African Rift Valley that still has rare geochronological constraints. As they have comparable sizes, volcanic history and erupted products, these edifices may have undergone comparable conditions of erosion which justify the deduction of relative chronology from their erosion pattern. Our GIS-based geomorphometric approach, the SHAPEVOLC algorithm, quantifies erupted or dismantled volumes by numerically modeling topographies resulting from the eruptive construction of each volcano. Constraining points are selected by analyses of morphometric properties of each cell of the current DEM, as the loci where the altitude is still representative of the un-eroded volcanic surfaces. A primary elevation surface is firstly adjusted to these constraining points by modeling a first-order pseudo-radial surface defined by: 1. the curve best fitting the concave-upwards volcano profile; 2. the location and elevation of the volcano summit; and 3. the possible eccentricity and azimuth parameters that allow to stretch and contract contours to adjust the shape of the model to the elliptically-shaped surface of the volcano. A second-order surface is next computed by local adjustment of the first-order surface to the constraining points to obtain the definitive primary elevation surface of the considered volcanic construct. Amount of erosion is obtained by summing the difference in elevation between reconstructed surfaces and current ones that allows to establish relative ages of volcanoes. For the 6 studied Virunga volcanoes

  7. Neotectonic faults and stress field in the East African Rift System around the Tanzanian Craton - A contribution to the seismotectonic map of Africa

    NASA Astrophysics Data System (ADS)

    Delvaux, Damien; Macheyeki, Athanas Simon; Fernandes, Rui-Manuel; Ayele, Atalay; Meghraoui, Mustapha

    2015-04-01

    As a contribution to the UNESCO-IUGS IGCP 601 project "Seismotectonics and seismic hazards in Africa" and in preparation of the Seismotectonic Map of Africa, we compiled the neotectonic faults related to the East African Rift System around the Tanzanian craton. The initial aim was to identify and map the potentially active faults. Faults are usually defined as active when they show seismogenic displacement during the last 10,000 to 100,000 years, generally on the basis of paleoseismic investigation. In East Africa, however, very few faults have been studied by paleoseismic techniques and even fewer have known historical seismic activation. To address this issue, we mapped faults that show morphological indications of displacement. We used the SRTM DTM (90 and 30 m when available to us), with artificial shading as basis for identify neotectonic faults, in combination with existing data from geological maps, publications and reports, complemented by our own field observations. Thermal springs often occur along tectonically active faults. We use them to distinguish present-day faulting from other mapped faults as they are in most cases structurally controlled. In parallel, we used also the available focal mechanisms and geological fault-slip data to constrain the stress second-order stress field (at the scale of rift segments) and locally also the third-order stress field (at the local scale). All these elements are combined and compared with existing kinematic models for the East African Rift based on earthquake slip vectors, GPS measurements and geologic indicators. The comparison evidences some local discrepancies between the stress field and the direction of opening, probably due to the interactions between different rift segments, as in the Rukwa rift, Mbeya southern junction between the eastern and western rift branches, and in the Manyara-Natron area.

  8. Multiple mantle upwellings in the transition zone beneath the northern East-African Rift system from relative P-wave travel-time tomography

    NASA Astrophysics Data System (ADS)

    Civiero, Chiara; Hammond, James O. S.; Goes, Saskia; Fishwick, Stewart; Ahmed, Abdulhakim; Ayele, Atalay; Doubre, Cecile; Goitom, Berhe; Keir, Derek; Kendall, J.-Michael; Leroy, Sylvie; Ogubazghi, Ghebrebrhan; Rümpker, Georg; Stuart, Graham W.

    2015-09-01

    Mantle plumes and consequent plate extension have been invoked as the likely cause of East African Rift volcanism. However, the nature of mantle upwelling is debated, with proposed configurations ranging from a single broad plume connected to the large low-shear-velocity province beneath Southern Africa, the so-called African Superplume, to multiple lower-mantle sources along the rift. We present a new P-wave travel-time tomography model below the northern East-African, Red Sea, and Gulf of Aden rifts and surrounding areas. Data are from stations that span an area from Madagascar to Saudi Arabia. The aperture of the integrated data set allows us to image structures of ˜100 km length-scale down to depths of 700-800 km beneath the study region. Our images provide evidence of two clusters of low-velocity structures consisting of features with diameter of 100-200 km that extend through the transition zone, the first beneath Afar and a second just west of the Main Ethiopian Rift, a region with off-rift volcanism. Considering seismic sensitivity to temperature, we interpret these features as upwellings with excess temperatures of 100 ± 50 K. The scale of the upwellings is smaller than expected for lower mantle plume sources. This, together with the change in pattern of the low-velocity anomalies across the base of the transition zone, suggests that ponding or flow of deep-plume material below the transition zone may be spawning these upper mantle upwellings. This article was corrected on 28 SEP 2015. See the end of the full text for details.

  9. Rift Valley fever in kidney transplant recipient returning from Mali with viral RNA detected in semen up to four months from symptom onset, France, autumn 2015.

    PubMed

    Haneche, Fatiha; Leparc-Goffart, Isabelle; Simon, Fabrice; Hentzien, Maxime; Martinez-Pourcher, Valérie; Caumes, Eric; Maquart, Marianne

    2016-05-01

    A 29-year-old kidney transplant recipient returning from Mali was diagnosed with Rift Valley fever (RVF) in France in autumn 2015. The patient was immunosuppressed due to his renal transplant. IgM and IgG specific to RVF virus (RVFV) were detected in cerebrospinal fluid and blood up to two months after symptom onset, whereas in urine, RVFV genomic RNA was detected by RT-PCR up to three months, and in semen up to four months post symptom onset. PMID:27172608

  10. Present-day strain rates and dynamics of the East African Rift

    NASA Astrophysics Data System (ADS)

    Stamps, D. S.; Flesch, L. M.; Calais, E.

    2009-04-01

    The forces and physical processes at work during continental rifting remain to be fully understood and quantified. We investigate the balance of large-scale forces affecting present-day rifting in East Africa using a thin sheet approach to quantify strain rates and deviatoric stresses. We develop a strain rate model constrained by a combination of GPS-derived kinematic models and seismic moment tensors (CMT catalog) for our region of interest. We estimate a total deviatoric stress field by combining (1) stresses caused by gravitational potential energy (GPE) gradients within the crust and (2) a buoyancy signal present in the topography that we use to compute stresses. To estimate internal body forces, we assume crustal thicknesses and lateral density variations modeled in Crust 2.0 (G. Laske and G. Masters, http://mahi.ucsd.edu/Gabi/sediment.html, 2000). In our preferred model of deviatoric stresses, we estimate and remove the dynamic topography buoyancy signal by allowing the mantle lithosphere density to vary, compensating the lithosphere to a given reference depth. To test the reliability of our total deviatoric stress field, we compare tensor patterns of deviatoric stresses, with and without contributions from the mantle, to tensor patterns from kinematic deformation indicators. Our results to date suggest that horizontal buoyancy forces arising from variable crustal thicknesses and lateral density variations within the lithosphere contribute significantly to the diverging plate boundary forces of the EAR but do not account for the entire budget of force needed to produce present-day deformation.

  11. Fault-related Soil Efflux of Mantle-derived CO2 in the Magadi and Natron Basins, East African Rift

    NASA Astrophysics Data System (ADS)

    Lee, H.; Muirhead, J.; Fischer, T. P.; Kattenhorn, S. A.; Ebinger, C. J.; Thomas, N.; Kianji, G.; Onguso, B.; Maqway, M. D.

    2014-12-01

    The Magadi (Kenya) and Natron (Tanzania) basins of the East African Rift are in an early stage (< 7 Ma) of continental rifting. The many normal faults observed in these areas create sediment-filled basins and a large number of alkaline springs feed water into two major lakes (Lake Magadi and Natron). Earthquake swarms reported in 1998 (Magadi) and 2007 (Natron) were accompanied by surface ruptures. Although CO2 is a major component of magmatic volatiles and fault-related fluids that may facilitate earthquakes and fault weakening, the soil CO2 efflux of continental rifts is poorly known. Here, we report soil CO2 flux rates measured in the Magadi and Natron basins, and carbon isotope values (δ13C, ‰ vs. PDB) to constrain CO2sources. Soil CO2 fluxes were measured at fault zones, horsts, grabens, and surface ruptures by EGM-4 (PP systems) with a gas accumulation chamber. A t-shaped connector with a needle was used for gas sampling into evacuated glass vials with a rubber septum. δ13C values were measured by isotope ratio mass spectrometer with a gas bench at the stable isotope laboratory, University of New Mexico. The fault zones in the Magadi basin have higher maximum CO2 flux rates (< 533.52 g m-2 d-1) and heavier δ13C values (< -3.8 ‰) than the Natron basin (< 147.12 g m-2 d-1 and < -6.2 ‰, respectively). In both areas, soil CO2 efflux is insignificant (< 10 g m-2 d-1) in both horsts and the middle of grabens with lighter δ 13C values (~ -10 ‰) likely resulting from significant air contribution. The highest CO2 flux rates (< 919.44 g m-2 d-1) were measured at recent surface ruptures, but they have lighter δ13C values (-10 to -15 ‰), implying significant air and biogenic C contributions. Our results indicate that (1) normal faults are pathways that deliver mantle-derived CO2 to the surface, (2) the Magadi basin exhibits greater mantle-derived CO2 than the Natron basin, and (3) recent ruptures are zones of shallow CO2 degassing.

  12. Application of knowledge-driven spatial modelling approaches and uncertainty management to a study of Rift Valley fever in Africa

    PubMed Central

    Clements, Archie CA; Pfeiffer, Dirk U; Martin, Vincent

    2006-01-01

    Background There are few studies that have investigated uncertainties surrounding the scientific community's knowledge of the geographical distribution of major animal diseases. This is particularly relevant to Rift Valley fever (RVF), a zoonotic disease causing destructive outbreaks in livestock and man, as the geographical range of the disease is widening to involve previously unaffected regions. In the current study we investigate the application of methods developed in the decision sciences: multiple criteria decision making using weighted linear combination and ordered weighted averages, and Dempster-Shafer theory, implemented within the geographical information system IDRISI, to obtain a greater understanding of uncertainty related to the geographical distribution of RVF. The focus is on presenting alternate methods where extensive field data are not available and traditional, model-based approaches to disease mapping are impossible to conduct. Results Using a compensatory multiple criteria decision making model based on weighted linear combination, most of sub-Saharan Africa was suitable for endemic circulation of RVF. In contrast, areas where rivers and lakes traversed semi-arid regions, such as those bordering the Sahara, were highly suitable for RVF epidemics and wet, tropical areas of central Africa had low suitability. Using a moderately non-compensatory model based on ordered weighted averages, the areas considered suitable for endemic and epidemic RVF were more restricted. Varying the relative weights of the different factors in the models did not affect suitability estimates to a large degree, but variations in model structure had a large impact on our suitability estimates. Our Dempster-Shafer analysis supported the belief that a range of semi-arid areas were suitable for RVF epidemics and the plausibility that many other areas of the continent were suitable. Areas where high levels of uncertainty were highlighted included the Ethiopian Highlands

  13. Fluoride exposure from groundwater as reflected by urinary fluoride and children's dental fluorosis in the Main Ethiopian Rift Valley.

    PubMed

    Rango, Tewodros; Vengosh, Avner; Jeuland, Marc; Tekle-Haimanot, Redda; Weinthal, Erika; Kravchenko, Julia; Paul, Christopher; McCornick, Peter

    2014-10-15

    This cross-sectional study explores the relationships between children's F(-) exposure from drinking groundwater and urinary F(-) concentrations, combined with dental fluorosis (DF) in the Main Ethiopian Rift (MER) Valley. We examined the DF prevalence and severity among 491 children (10 to 15 years old) who are life-long residents of 33 rural communities in which groundwater concentrations of F(-) cover a wide range. A subset of 156 children was selected for urinary F(-) measurements. Our results showed that the mean F(-) concentrations in groundwater were 8.5 ± 4.1 mg/L (range: 1.1-18 mg/L), while those in urine were 12.1±7.3 mg/L (range: 1.1-39.8 mg/L). The prevalence of mild, moderate, and severe DF in children's teeth was 17%, 29%, and 45%, respectively, and the majority (90%; n=140) of the children had urinary F(-) concentrations above 3 mg/L. Below this level most of the teeth showed mild forms of DF. The exposure-response relationship between F(-) and DF was positive and non-linear, with DF severity tending to level off above a F(-) threshold of ~6 mg/L, most likely due to the fact that at ~6 mg/L the enamel is damaged as much as it can be clinically observed in most children. We also observed differential prevalence (and severity) of DF and urinary concentration, across children exposed to similar F(-) concentrations in water, which highlights the importance of individual-specific factors in addition to the F(-) levels in drinking water. Finally, we investigated urinary F(-) in children from communities where defluoridation remediation was taking place. The lower F(-) concentration measured in urine of this population demonstrates the capacity of the urinary F(-) method as an effective monitoring and evaluation tool for assessing the outcome of successful F(-) mitigation strategy in relatively short time (months) in areas affected with severe fluorosis. PMID:25084227

  14. Determinants of peak discharge in steep mountain catchments - Case of the Rift Valley escarpment of Northern Ethiopia

    NASA Astrophysics Data System (ADS)

    Asfaha, Tesfaalem G.; Frankl, Amaury; Haile, Mitiku; Zenebe, Amanuel; Nyssen, Jan

    2015-10-01

    Peak discharge is an important hydrological parameter of mountain torrents. However, due to the flashy and destructive nature of their stream flows, it is usually difficult to understand the hydrological behavior of steep mountain catchments through direct measurements of discharges. In this study, 332 daily peak discharge events from 11 steep (0.27-0.65 m m-1) catchments (0.4-25 km2) were measured in three rainy seasons (2012-2014) with the objective of analyzing runoff response of steep mountain catchments in the western Rift Valley escarpment of Northern Ethiopia. Seven rain gauges were installed at different altitudes (1623-2851 m a.s.l.) in and nearby the catchments. Event peak discharges were calculated using the Manning's equation from daily measurements of maximum discharge height at 11 crest stage gauges. Percentages of land cover classes were detected from high resolution (0.6 m) Google Earth Imagery (February 1, 2014). Morphometric characteristics of the catchments were computed both from ASTER digital elevation model (DEM) and topographic maps. Correlation analysis between average daily precipitation (Pd) and peak discharge (Qp) showed strong positive relation (R2 = 0.32-0.94, P < 0.05) in all the catchments. Catchment-specific peak discharge coefficient (Cp) showed a strong decreasing relation with vegetation cover (R2 = 0.85, P < 0.01), relative distance of vegetation cover from the thalweg (R2 = 0.55, P < 0.01), combined index of vegetation cover and its relative distance from the thalweg (R2 = 0.76, P < 0.01), catchment length (R2 = 0.37, P < 0.05) and time of concentration (R2 = 0.43, P < 0.05). It was correlated positively with catchment slope gradient (R2 = 0.37, P < 0.05) and index of vegetation distribution (R2 = 0.45, P < 0.05). A stepwise multiple regression analysis revealed that 99% (P < 0.01) of the variability of catchment-specific peak discharge coefficient in the catchments can be predicted by vegetation cover and infiltration number

  15. Lake level change and total water discharge in East Africa Rift Valley from satellite-based observations

    NASA Astrophysics Data System (ADS)

    Hassan, Ayman A.; Jin, Shuanggen

    2014-06-01

    The measurement of total basin water discharge is important for understanding the hydrological and climatologic issues related to the water and energy cycles. Climatic extreme events are normal climatic occurrences in Africa. For example, extensive droughts are regular features in the last few decades in parts of East Africa, which suffers from a lack of in situ observations as well as a lack of regional hydrological models. In this study, multi-disciplinary different types of space-borne observations and global hydrological models are used to study total water discharge in the Great Rift Valley of East Africa (i.e. Lakes Victoria, Tanganyika, and Malawi) from January 2003 to December 2012. The data include the following: (1) total water storage (TWS) variations from Gravity Recovery and Climate Experiment (GRACE), (2) the lake level variations from Satellite Alimetric data, (3) rainfall from Tropical Rainfall Measurement Mission (TRMM) products, (4) soil moisture from WaterGAP Global Hydrology Model (WGHM), and (5) water fluxes from Global Land Data Assimilation System (GLDAS). Results show that a significant decline in the average lake level is found for all of the three lakes between 2003 and 2006. GRACE TWS variations of the whole basin area show the same pattern of variation as the average lake level variations estimated from Altimetric data. The TWS in the basin area of Lakes Victoria and Malawi is governed by the surface water stored in each lake itself, while for Lake Tanganyika, it is governed by both surface water and the soil moisture content in the basin area. Furthermore, the effect of rainfall on TWS is also studied. A phase lag of ~ 2 months is found between TRMM rainfall and GRACE TWS (generally, rainfall precedes the GRACE TWS) for the three lakes. In addition, the regional evapotranspiration ET is estimated from the water balance equation using GRACE land-water solutions, rainfall data from TRMM and runoff values obtained as a fraction of rainfall

  16. Randomized Controlled Field Trial to Assess the Immunogenicity and Safety of Rift Valley Fever Clone 13 Vaccine in Livestock

    PubMed Central

    Njenga, M. Kariuki; Njagi, Leonard; Thumbi, S. Mwangi; Kahariri, Samuel; Githinji, Jane; Omondi, Eunice; Baden, Amy; Murithi, Mbabu; Paweska, Janusz; Ithondeka, Peter M.; Ngeiywa, Kisa J.; Dungu, Baptiste; Donadeu, Meritxell; Munyua, Peninah M.

    2015-01-01

    Background Although livestock vaccination is effective in preventing Rift Valley fever (RVF) epidemics, there are concerns about safety and effectiveness of the only commercially available RVF Smithburn vaccine. We conducted a randomized controlled field trial to evaluate the immunogenicity and safety of the new RVF Clone 13 vaccine, recently registered in South Africa. Methods In a blinded randomized controlled field trial, 404 animals (85 cattle, 168 sheep, and 151 goats) in three farms in Kenya were divided into three groups. Group A included males and non-pregnant females that were randomized and assigned to two groups; one vaccinated with RVF Clone 13 and the other given placebo. Groups B included animals in 1st half of pregnancy, and group C animals in 2nd half of pregnancy, which were also randomized and either vaccinated and given placebo. Animals were monitored for one year and virus antibodies titers assessed on days 14, 28, 56, 183 and 365. Results In vaccinated goats (N = 72), 72% developed anti-RVF virus IgM antibodies and 97% neutralizing IgG antibodies. In vaccinated sheep (N = 77), 84% developed IgM and 91% neutralizing IgG antibodies. Vaccinated cattle (N = 42) did not develop IgM antibodies but 67% developed neutralizing IgG antibodies. At day 14 post-vaccination, the odds of being seropositive for IgG in the vaccine group was 3.6 (95% CI, 1.5 – 9.2) in cattle, 90.0 (95% CI, 25.1 – 579.2) in goats, and 40.0 (95% CI, 16.5 – 110.5) in sheep. Abortion was observed in one vaccinated goat but histopathologic analysis did not indicate RVF virus infection. There was no evidence of teratogenicity in vaccinated or placebo animals. Conclusions The results suggest RVF Clone 13 vaccine is safe to use and has high (>90%) immunogenicity in sheep and goats but moderate (> 65%) immunogenicity in cattle. PMID:25756501

  17. Nonspreading Rift Valley Fever Virus Infection of Human Dendritic Cells Results in Downregulation of CD83 and Full Maturation of Bystander Cells

    PubMed Central

    Oreshkova, Nadia; Wichgers Schreur, Paul J.; Spel, Lotte; Vloet, Rianka P. M.; Moormann, Rob J. M.; Boes, Marianne; Kortekaas, Jeroen

    2015-01-01

    Vaccines based on nonspreading Rift Valley fever virus (NSR) induce strong humoral and robust cellular immune responses with pronounced Th1 polarisation. The present work was aimed to gain insight into the molecular basis of NSR-mediated immunity. Recent studies have demonstrated that wild-type Rift Valley fever virus efficiently targets and replicates in dendritic cells (DCs). We found that NSR infection of cultured human DCs results in maturation of DCs, characterized by surface upregulation of CD40, CD80, CD86, MHC-I and MHC-II and secretion of the proinflammatory cytokines IFN-β, IL-6 and TNF. Interestingly, expression of the most prominent marker of DC maturation, CD83, was consistently downregulated at 24 hours post infection. Remarkably, NSR infection also completely abrogated CD83 upregulation by LPS. Downregulation of CD83 was not associated with reduced mRNA levels or impaired CD83 mRNA transport from the nucleus and could not be prevented by inhibition of the proteasome or endocytic degradation pathways, suggesting that suppression occurs at the translational level. In contrast to infected cells, bystander DCs displayed full maturation as evidenced by upregulation of CD83. Our results indicate that bystander DCs play an important role in NSR-mediated immunity. PMID:26575844

  18. Application of polar-orbiting, meteorological satellite data to detect flooding of Rift Valley Fever virus vector mosquito habitats in Kenya.

    PubMed

    Linthicum, K J; Bailey, C L; Tucker, C J; Mitchell, K D; Logan, T M; Davies, F G; Kamau, C W; Thande, P C; Wagateh, J N

    1990-10-01

    Measurements of green-leaf vegetation dynamics recorded by the advanced very high resolution radiometer instruments onboard National Oceanic and Atmospheric Administration satellites 7 and 9 were used to derive ground moisture and rainfall patterns in Kenya and monitor resultant flooding of mosquito larval habitats (dambos) likely to support Rift Valley Fever virus vector mosquitoes (Aedes and Culex spp.). Satellite-derived data from mid-1981 to December 1988 have been analysed with corresponding rainfall, flooding and vector population data as they relate to Rift Valley Fever virus ecology. Single (7 x 7 km) and multiple grid-cell image analysis (200 x 300 km) in small localized areas and large geographical regions, respectively, of vegetation data were used to quantify the potential for flooding of mosquito breeding habitats. The ability to detect accurately parameters, such as ground moisture, that determine flooding could provide local officials with sufficient warning to allow for implementation of specific mosquito control measures before a disease outbreak. PMID:1983457

  19. Stable isotope variation in tooth enamel from Neogene hippopotamids: monitor of meso and global climate and rift dynamics on the Albertine Rift, Uganda

    NASA Astrophysics Data System (ADS)

    Brachert, Thomas Christian; Brügmann, Gerhard B.; Mertz, Dieter F.; Kullmer, Ottmar; Schrenk, Friedemann; Jacob, Dorrit E.; Ssemmanda, Immaculate; Taubald, Heinrich

    2010-10-01

    The Neogene was a period of long-term global cooling and increasing climatic variability. Variations in African-Asian monsoon intensity over the last 7 Ma have been deduced from patterns of eolian dust export into the Indian Ocean and Mediterranean Sea as well as from lake level records in the East African Rift System (EARS). However, lake systems not only depend on rainfall patterns, but also on the size and physiography of river catchment areas. This study is based on stable isotope proxy data (18O/16O, 13C/12C) from tooth enamel of hippopotamids (Mammalia) and aims in unravelling long-term climate and watershed dynamics that control the evolution of palaeolake systems in the western branch of the EARS (Lake Albert, Uganda) during the Late Neogene (7.5 Ma to recent). Having no dietary preferences with respect to wooded (C3) versus grassland (C4) vegetation, these territorial, water-dependant mammals are particularly useful for palaeoclimate analyses. As inhabitants of lakes and rivers, hippopotamid tooth enamel isotope data document mesoclimates of topographic depressions, such as the rift valleys and, therefore, changes in relative valley depth instead of exclusively global climate changes. Consequently, we ascribe a synchronous maximum in 18O/16O and 13C/12C composition of hippopotamid enamel centred around 1.5-2.5 Ma to maximum aridity and/or maximum hydrological isolation of the rift floor from rift-external river catchment areas in response to the combined effects of rift shoulder uplift and subsidence of the rift valley floor. Structural rearrangements by ~2.5 Ma within the northern segment of the Albertine Rift are well constrained by reversals in river flow, cannibalisation of catchments, biogeographic turnover and uplift of the Rwenzori horst. However, a growing rain shadow is not obvious in 18O/16O signatures of the hippopotamid teeth of the Albertine Rift. According to our interpretation, this is the result of the overriding effect of evaporation on 18

  20. Mapping of the major structures of the African rift system using ERTS-1

    NASA Technical Reports Server (NTRS)

    Mohr, P. A. (Principal Investigator)

    1973-01-01

    The author has identified the following significant results. The structural margin of western Afar with the Ethiopian plateau is marked by a rather wide zone of crustal deformation. ERTS-1 imagery has now permitted a more precise mapping of the structures of this marginal zone, and in particular of the discontinuous marginal graben. The tectonic style of the graben is different in the north from the south, and in the latter region the graben is discordant with the regional tectonic trend. The structural margin of the southern Afar with the Somalian plateau is formed, in the western sector, by a remarkable series of fault-zone splays. Afar-plateau boundary fault-zones successively curve northeast and then NNE to become Afar floor fault-zones, with a distance of about 25 km separating successive turnoffs. The transition from Ethiopian rift to Gulf of Aden tread faulting along this margin is fascinatingly complex. A simplistic crustal thinning model is not adequate to explain all observed structural features of the Afar margins.

  1. Continental rift evolution: From rift initiation to incipient break-up in the Main Ethiopian Rift, East Africa

    NASA Astrophysics Data System (ADS)

    Corti, Giacomo

    2009-09-01

    The Main Ethiopian Rift is a key sector of the East African Rift System that connects the Afar depression, at Red Sea-Gulf of Aden junction, with the Turkana depression and Kenya Rift to the South. It is a magmatic rift that records all the different stages of rift evolution from rift initiation to break-up and incipient oceanic spreading: it is thus an ideal place to analyse the evolution of continental extension, the rupture of lithospheric plates and the dynamics by which distributed continental deformation is progressively focused at oceanic spreading centres. The first tectono-magmatic event related to the Tertiary rifting was the eruption of voluminous flood basalts that apparently occurred in a rather short time interval at around 30 Ma; strong plateau uplift, which resulted in the development of the Ethiopian and Somalian plateaus now surrounding the rift valley, has been suggested to have initiated contemporaneously or shortly after the extensive flood-basalt volcanism, although its exact timing remains controversial. Voluminous volcanism and uplift started prior to the main rifting phases, suggesting a mantle plume influence on the Tertiary deformation in East Africa. Different plume hypothesis have been suggested, with recent models indicating the existence of deep superplume originating at the core-mantle boundary beneath southern Africa, rising in a north-northeastward direction toward eastern Africa, and feeding multiple plume stems in the upper mantle. However, the existence of this whole-mantle feature and its possible connection with Tertiary rifting are highly debated. The main rifting phases started diachronously along the MER in the Mio-Pliocene; rift propagation was not a smooth process but rather a process with punctuated episodes of extension and relative quiescence. Rift location was most probably controlled by the reactivation of a lithospheric-scale pre-Cambrian weakness; the orientation of this weakness (roughly NE-SW) and the Late

  2. An integrated geophysical study of the northern Kenya rift

    NASA Astrophysics Data System (ADS)

    Mariita, Nicolas O.; Keller, G. Randy

    2007-06-01

    The Kenyan part of the East African rift is among the most studied rift zones in the world. It is characterized by: (1) a classic rift valley, (2) sheer escarpments along the faulted borders of the rift valley, (3) voluminous volcanics that flowed from faults and fissures along the rift, and (4) axial and flank volcanoes where magma flow was most intense. In northern Kenya, the rift faults formed in an area where the lithosphere was weakened and stretched by Cretaceous-Paleogene extension, and in central and southern Kenya, it formed along old zones of weakness at the contact between the Archean Tanzania craton and the Proterozoic Mozambique orogenic belt. Recent geophysical investigations focused on the tectonic evolution of the East African rift and on exploration for geothermal energy in the southern portion of the Kenyan rift provide considerable information and insight on the structure and evolution of the lithosphere. In the north, a variety of other data exist. However, the lack of an integrated regional analysis of these data was the motivation for this study. Our study began with the collection and compilation of gravity data, and then we used the seismic refraction results from the Kenya Rift International Seismic Project (KRISP), published seismic reflection data, aeromagnetic data, and geologic and drilling data as constraints in the construction of integrated gravity models. These models and gravity anomaly maps provide insight on spatial variations in crustal thickness and upper mantle structure. In addition, they show the distribution of basins and help characterize the distribution of magmatism along the axis of the northern sector of the rift. Our main observations are the following: (1) the region of thinning and anomalous mantle widens northward in agreement with previous studies showing that the crust thins from about 35 km in the south to 20 km in the north; (2) as observed in the south, gravity highs observed along the axis are due to mafic

  3. Screening for Rift Valley fever infection in northern Somalia: a GIS based survey method to overcome the lack of sampling frame.

    PubMed

    Soumare, Baba; Tempia, Stefano; Cagnolati, Vittorio; Mohamoud, Abdullatif; Van Huylenbroeck, Guido; Berkvens, Dirk

    2007-04-15

    Following repeated import bans imposed by Saudi Arabia on livestock originated from Somalia due to suspicion of Rift Valley fever (RVF) presence and the severe socio-economic consequences of this, it was imperative for the Somaliland government to carry out surveillance activities in order to determine the status of transboundary diseases in its territory. A GIS computer software (Arcview) was used to overcome the lack of lists of sampling sites due to the high mobility of pastoral nomadic herds in the study area. This method proved very convenient and flexible for the random selection of sampling sites and thus the compliance with the requirements by the World Organisation for Animal Health (OIE) for statistically valid methods if the surveillance outcome is to meet international recognition and acceptance. Screening in Somaliland in 2001 and in Puntland in 2003 which targeted mainly sheep and goats aged 1-2 years (97% of surveyed animals) revealed no signs compatible with the disease but an overall sero-prevalence of 2+/-0.02% (90/4570) and 5+/-0.3% (206/4050), respectively. The spatial distribution showed clusters of high sero-prevalence located mostly in the Nugal Valley. This trend was confirmed by the follow-up survey implemented in Somaliland in 2004 with a herd prevalence of 80+/-6% and a within-herd prevalence up to 50% located again in the Nugal Valley. This result suggests the maintenance and increase of RVF virus activity in the valley. In addition conditions favourable to the breeding and survival of the vector population and the high density of livestock make the Nugal Valley an area of high risk for a RVF outbreak where sentinel herds will be placed. PMID:17257783

  4. RIFT VALLEY FEVER VIRUS: AN EMERGING THREAT TO WILDLIFE, LIVESTOCK, AND HUMANS IN THE U.S. - A REVIEW OF ISSUES AND CONCERNS, AND A GIS EARLY WARNING SYSTEM FOR RVF VECTORS

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF) virus is a mosquito-borne zoonotic hemorrhagic disease that causes 100% abortions in ungulates such as cattle, sheep, and goats, and is often fatal to young animals. Though currently confined mainly to Africa this disease could be introduced into the U.S. and spread via mosq...

  5. A REVIEW OF ISSUES AND CONCERNS OF RIFT VALLEY FEVER VIRUS, A POTENTIAL EMERGING THREAT TO LIVESTOCK, WILDLIFE, AND HUMANS IN THE U.S., AND A GIS EARLY WARNING SYSTEM FOR RVF VECTORS

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rift Valley fever (RVF) virus is a mosquito-borne zoonotic hemorrhagic disease that causes 100% abortions in ungulates such as cattle, sheep, and goats, and is often fatal to young animals. Though currently confined mainly to Africa this disease could be introduced into the U.S. and spread via mosq...

  6. Age constraints for the present fault configuration in the Imperial Valley, California - Evidence for northwestward propagation of the Gulf of California rift system

    NASA Technical Reports Server (NTRS)

    Larsen, Shawn; Reilinger, Robert

    1991-01-01

    Releveling and other geophysical data for the Imperial Valley of southern California suggest the northern section of the Imperial-Brawley fault system, which includes the Mesquite Basin and Brawley Seismic Zone, is much younger than the 4 to 5 million year age of the valley itself. A minimum age of 3000 years is calculated for the northern segment of the Imperial fault from correlations between surface topography and geodetically observed seismic/interseismic vertical movements. Calculations of a maximum age of 80,000 years is based upon displacements in the crystalline basement along the Imperial fault, inferred from seismic refraction surveys. This young age supports recent interpretations of heat flow measurements, which also suggest that the current patterns of seismicity and faults in the Imperial Valley are not long lived. The current fault geometry and basement morphology suggest northwestward growth of the Imperial fault and migration of the Brawley Seismic Zone. It is suggested that this migration is a manifestation of the propagation of the Gulf of California rift system into the North American continent.

  7. Age constraints for the present fault configuration in the Imperial Valley, California: Evidence for northwestward propagation of the Gulf of California rift system

    NASA Technical Reports Server (NTRS)

    Larsen, Shawn; Reilinger, Robert

    1990-01-01

    Releveling and other geophysical data for the Imperial Valley of southern California suggest the northern section of the Imperial-Brawley fault system, which includes the Mesquite Basin and Brawley Seismic Zone, is much younger than the 4 to 5 million year age of the valley itself. A minimum age of 3000 years is calculated for the northern segment of the Imperial fault from correlations between surface topography and geodetically observed seismic/interseismic vertical movements. Calculations of a maximum age of 80,000 years is based upon displacements in the crystalline basement along the Imperial fault, inferred from seismic refraction surveys. This young age supports recent interpretations of heat flow measurements, which also suggest that the current patterns of seismicity and faults in the Imperial Valley are not long lived. The current fault geometry and basement morphology suggest northwestward growth of the Imperial fault and migration of the Brawley Seismic Zone. It is suggested that this migration is a manifestation of the propagation of the Gulf of California rift system into the North American continent.

  8. NSs Virulence Factor of Rift Valley Fever Virus Engages the F-Box Proteins FBXW11 and β-TRCP1 To Degrade the Antiviral Protein Kinase PKR

    PubMed Central

    Kainulainen, Markus; Lau, Simone; Samuel, Charles E.; Hornung, Veit

    2016-01-01

    ABSTRACT Rift Valley fever virus (RVFV, family Bunyaviridae, genus Phlebovirus) is a relevant pathogen of both humans and livestock in Africa. The nonstructural protein NSs is a major virulence factor known to suppress the type I interferon (IFN) response by inhibiting host cell transcription and by proteasomal degradation of a major antiviral IFN effector, the translation-inhibiting protein kinase PKR. Here, we identified components of the modular SCF (Skp1, Cul1, F-box protein)-type E3 ubiquitin ligases as mediators of PKR destruction by NSs. Small interfering RNAs (siRNAs) against the conserved SCF subunit Skp1 protected PKR from NSs-mediated degradation. Consequently, RVFV replication was severely reduced in Skp1-depleted cells when PKR was present. SCF complexes have a variable F-box protein subunit that determines substrate specificity for ubiquitination. We performed an siRNA screen for all (about 70) human F-box proteins and found FBXW11 to be involved in PKR degradation. The partial stabilization of PKR by FBXW11 depletion upregulated PKR autophosphorylation and phosphorylation of the PKR substrate eIF2α and caused a shutoff of host cell protein synthesis in RVFV-infected cells. To maximally protect PKR from the action of NSs, knockdown of structurally and functionally related FBXW1 (also known as β-TRCP1), in addition to FBXW11 deletion, was necessary. Consequently, NSs was found to interact with both FBXW11 and β-TRCP1. Thus, NSs eliminates the antiviral kinase PKR by recruitment of SCF-type E3 ubiquitin ligases containing FBXW11 and β-TRCP1 as substrate recognition subunits. This antagonism of PKR by NSs is essential for efficient RVFV replication in mammalian cells. IMPORTANCE Rift Valley fever virus is a pathogen of humans and animals that has the potential to spread from Africa and the Arabian Peninsula to other regions. A major virulence mechanism is the proteasomal degradation of the antiviral kinase PKR by the viral protein NSs. Here, we

  9. The L, M, and S Segments of Rift Valley Fever Virus MP-12 Vaccine Independently Contribute to a Temperature-Sensitive Phenotype

    PubMed Central

    Nishiyama, Shoko; Lokugamage, Nandadeva

    2016-01-01

    ABSTRACT Rift Valley fever (RVF) is endemic to Africa, and the mosquito-borne disease is characterized by “abortion storms” in ruminants and by hemorrhagic fever, encephalitis, and blindness in humans. Rift Valley fever virus (RVFV; family Bunyaviridae, genus Phlebovirus) has a tripartite negative-stranded RNA genome (L, M, and S segments). A live-attenuated vaccine for RVF, the MP-12 vaccine, is conditionally licensed for veterinary use in the United States. MP-12 is fully attenuated by the combination of the partially attenuated L, M, and S segments. Temperature sensitivity (ts) limits viral replication at a restrictive temperature and may be involved with viral attenuation. In this study, we aimed to characterize the ts mutations for MP-12. The MP-12 vaccine showed restricted replication at 38°C and replication shutoff (100-fold or greater reduction in virus titer compared to that at 37°C) at 39°C in Vero and MRC-5 cells. Using rZH501 reassortants with either the MP-12 L, M, or S segment, we found that all three segments encode a temperature-sensitive phenotype. However, the ts phenotype of the S segment was weaker than that of the M or L segment. We identified Gn-Y259H, Gc-R1182G, L-V172A, and L-M1244I as major ts mutations for MP-12. The ts mutations in the L segment decreased viral RNA synthesis, while those in the M segment delayed progeny production from infected cells. We also found that a lack of NSs and/or 78kD/NSm protein expression minimally affected the ts phenotype. Our study revealed that MP-12 is a unique vaccine carrying ts mutations in the L, M, and S segments. IMPORTANCE Rift Valley fever (RVF) is a mosquito-borne viral disease endemic to Africa, characterized by high rates of abortion in ruminants and severe diseases in humans. Vaccination is important to prevent the spread of disease, and a live-attenuated MP-12 vaccine is currently the only vaccine with a conditional license in the United States. This study determined the temperature

  10. How strong ist the impact of changing topography of the East African Rift System on regional climate?

    NASA Astrophysics Data System (ADS)

    Prömmel, Kerstin; Kaspar, Frank; Cubasch, Ulrich

    2010-05-01

    The evolution of the East African Rift System (EARS) leads to a topography change at the surface and the impact of this change on climate in this region can easily be analysed with climate models. In the present study both global and regional climate models are applied. The global climate model is the coupled atmosphere ocean general circulation model ECHO-G and the regional climate model is the non-hydrostatic CLM, which is the climate version of the numerical weather prediction model of the German Meterorological Service. At the lateral boundaries the regional model is driven by the simulations performed with the global model. Different topographical situations representing possible conditions in the past, are simulated with the global and the regional climate model. One assumption affects only the highest peaks of the EARS south of the Turkana Channel by reducing them to 1200 m. The other assumptions affect a much larger area covering the whole of Southern and Eastern Africa. Over this region topography is reduced by 25%, 50%, 75% and 95%. These different topography reductions have an impact on circulation and therefore also on moisture transport. This leads to changes in the precipitation patterns over Africa. One strong effect is the decrease in orographic precipitation windward of the mountains. Wetter conditions can be found over the east coast of Africa, where moisture is transported from the Indian Ocean farther into the continent due to the lower barrier. Both global and regional models show similar results on the continental scale, however the results of the regional model are much more detailed due to the higher horizontal resolution (50 km) compared to the global model (~350 km).

  11. Correlation between the silica concentration and the orifice temperature in the warm springs along the jordan-dead sea rift valley

    USGS Publications Warehouse

    Levitte, D.; Eckstein, Y.

    1978-01-01

    Analysis of twenty-one thermal springs emerging along the Jordan-Dead Sea Rift Valley in Israel indicates a very good correlation between the concentration of dissolved silica and the temperature of the spring orifice. Dissolution of quartz was identified as the apparent source of the silica in the water. Application of the silica geothermometer for mixed systems suggests that the springs in the Tiberias Lake Basin are supplied with hot water from deep reservoir (or reservoirs) at a temperature of 115??C (239??F). The same temperature was postulated earlier by the application of the Na-K-Ca hydro-geothermometer to a group of thermal springs in the same basin. The temperature of the reservoir supplying hot brines to the springs emerging along the western shore of the Dead Sea is estimated at 90??C (194??F).

  12. Risk assessment of the introduction of Rift Valley fever from the Horn of Africa to Yemen via legal trade of small ruminants.

    PubMed

    Abdo-Salem, Shaif; Waret-Szkuta, Agnès; Roger, François; Olive, Marie-Marie; Saeed, Khalid; Chevalier, Véronique

    2011-02-01

    Rift Valley fever (RVF) is a mosquito-borne viral zoonosis of increasing global importance. Occurring since 1930 across Africa, it was detected for the first time in Saudi Arabia and Yemen in September 2000, leading to human deaths and major losses in livestock populations. Assuming the virus has not survived in Yemen or has been circulating at a low level, authors qualitatively assessed the likelihood of "re-introduction" of RVF into Yemen through the legal importation of small ruminants from the Horn of Africa. The overall probability of introduction was assessed very low to medium, increasing during festival periods and higher when considering a direct transmission exposure as compared to a vectorial transmission exposure. The uncertainty was considered to be medium underlining important gaps in information that need to be fulfilled in the region. Options to reduce the risk are proposed and discussed, including possible improvements of the current Yemeni quarantine system. PMID:20967567

  13. Identification of central Kenyan Rift Valley Fever virus vector habitats with Landsat TM and evaluation of their flooding status with airborne imaging radar

    NASA Technical Reports Server (NTRS)

    Pope, K. O.; Sheffner, E. J.; Linthicum, K. J.; Bailey, C. L.; Logan, T. M.; Kasischke, E. S.; Birney, K.; Njogu, A. R.; Roberts, C. R.

    1992-01-01

    Rift Valley Fever (RVF) is a mosquito-borne virus that affects livestock and humans in Africa. Landsat TM data are shown to be effective in identifying dambos, intermittently flooded areas that are potential mosquite breeding sites, in an area north of Nairobi, Kenya. Positive results were obtained from a limited test of flood detection in dambos with airborne high resolution L, C, and X band multipolarization SAR imagery. L and C bands were effective in detecting flooded dambos, but LHH was by far the best channel for discrimination between flooded and nonflooded sites in both sedge and short-grass environments. This study demonstrates the feasibility of a combined passive and active remote sensing program for monitoring the location and condition of RVF vector habitats, thus making future control of the disease more promising.

  14. Detection of Rift Valley Fever Virus Interepidemic Activity in Some Hotspot Areas of Kenya by Sentinel Animal Surveillance, 2009–2012

    PubMed Central

    Lichoti, Jacqueline Kasiiti; Oriko, Abuu A.; Okutoyi, Leonard Ateya; Wauna, James Ogaa; Tchouassi, David P.; Tigoi, Caroline C.; Kemp, Steve; Sang, Rosemary; Mbabu, Rees Murithi

    2014-01-01

    Rift Valley fever virus causes an important zoonotic disease of humans and small ruminants in Eastern Africa and is spread primarily by a mosquito vector. In this region, it occurs as epizootics that typically occur at 5–15-year intervals associated with unusual rainfall events. It has hitherto been known that the virus is maintained between outbreaks in dormant eggs of the mosquito vector and this has formed the basis of understanding of the epidemiology and control strategies of the disease. We show here that seroconversion and sporadic acute disease do occur during the interepidemic periods (IEPs) in the absence of reported cases in livestock or humans. The finding indicates that previously undetected low-level virus transmission during the IEPs does occur and that epizootics may also be due to periodic expansion of mosquito vectors in the presence of both circulating virus and naïve animals. PMID:25202470

  15. Relationship of Climate, Geography, and Geology to the Incidence of Rift Valley Fever in Kenya during the 2006–2007 Outbreak

    PubMed Central

    Hightower, Allen; Kinkade, Carl; Nguku, Patrick M.; Anyangu, Amwayi; Mutonga, David; Omolo, Jared; Njenga, M. Kariuki; Feikin, Daniel R.; Schnabel, David; Ombok, Maurice; Breiman, Robert F.

    2012-01-01

    We estimated Rift Valley fever (RVF) incidence as a function of geological, geographical, and climatological factors during the 2006–2007 RVF epidemic in Kenya. Location information was obtained for 214 of 340 (63%) confirmed and probable RVF cases that occurred during an outbreak from November 1, 2006 to February 28, 2007. Locations with subtypes of solonetz, calcisols, solonchaks, and planosols soil types were highly associated with RVF occurrence during the outbreak period. Increased rainfall and higher greenness measures before the outbreak were associated with increased risk. RVF was more likely to occur on plains, in densely bushed areas, at lower elevations, and in the Somalia acacia ecological zone. Cases occurred in three spatial temporal clusters that differed by the date of associated rainfall, soil type, and land usage. PMID:22302875

  16. Relationship of climate, geography, and geology to the incidence of Rift Valley fever in Kenya during the 2006-2007 outbreak.

    PubMed

    Hightower, Allen; Kinkade, Carl; Nguku, Patrick M; Anyangu, Amwayi; Mutonga, David; Omolo, Jared; Njenga, M Kariuki; Feikin, Daniel R; Schnabel, David; Ombok, Maurice; Breiman, Robert F

    2012-02-01

    We estimated Rift Valley fever (RVF) incidence as a function of geological, geographical, and climatological factors during the 2006-2007 RVF epidemic in Kenya. Location information was obtained for 214 of 340 (63%) confirmed and probable RVF cases that occurred during an outbreak from November 1, 2006 to February 28, 2007. Locations with subtypes of solonetz, calcisols, solonchaks, and planosols soil types were highly associated with RVF occurrence during the outbreak period. Increased rainfall and higher greenness measures before the outbreak were associated with increased risk. RVF was more likely to occur on plains, in densely bushed areas, at lower elevations, and in the Somalia acacia ecological zone. Cases occurred in three spatial temporal clusters that differed by the date of associated rainfall, soil type, and land usage. PMID:22302875

  17. Hydrothermal circulation, serpentinization, and degassing at a rift valley-fracture zone intersection: Mid-Atlantic Ridge near 15[degree]N, 45[degree]W

    SciTech Connect

    Rona, P.A.; Nelson, T.A. ); Bougault, H.; Charlou, J.L.; Needham, H.D. ); Appriou, P. ); Trefry, J.H. ); Eberhart, G.L.; Barone, A. )

    1992-09-01

    A hydrothermal system characterized by high ratios of methane to both manganese and suspended particulate matter was detected in seawater sampled at the eastern intersection of the rift valley of the Mid-Atlantic Ridge with the Fifteen-Twenty Fracture Zone. This finding contrasts with low ratios in black smoker-type hydrothermal systems that occur within spreading segments. Near-bottom water sampling coordinated with SeaBeam bathymetry and camera-temperature tows detected the highest concentrations of methane at fault zones in rocks with the appearance of altered ultramafic units in a large dome that forms part of the inside corner high at the intersection. The distinct chemical signatures of the two types of hydrothermal systems are inferred to be controlled by different circulation pathways related to reaction of seawater primarily with ultramafic rocks at intersections of spreading segments with fracture zones but with mafic rocks within spreading segments.

  18. Prediction, assessment of the Rift Valley fever activity in East and Southern Africa 2006-2008 and possible vector control strategies.

    PubMed

    Anyamba, Assaf; Linthicum, Kenneth J; Small, Jennifer; Britch, Seth C; Pak, Edwin; de La Rocque, Stephane; Formenty, Pierre; Hightower, Allen W; Breiman, Robert F; Chretien, Jean-Paul; Tucker, Compton J; Schnabel, David; Sang, Rosemary; Haagsma, Karl; Latham, Mark; Lewandowski, Henry B; Magdi, Salih Osman; Mohamed, Mohamed Ally; Nguku, Patrick M; Reynes, Jean-Marc; Swanepoel, Robert

    2010-08-01

    Historical outbreaks of Rift Valley fever (RVF) since the early 1950s have been associated with cyclical patterns of the El Niño/Southern Oscillation (ENSO) phenomenon, which results in elevated and widespread rainfall over the RVF endemic areas of Africa. Using satellite measurements of global and regional elevated sea surface temperatures, elevated rainfall, and satellite derived-normalized difference vegetation index data, we predicted with lead times of 2-4 months areas where outbreaks of RVF in humans and animals were expected and occurred in the Horn of Africa, Sudan, and Southern Africa at different time periods from September 2006 to March 2008. Predictions were confirmed by entomological field investigations of virus activity and by reported cases of RVF in human and livestock populations. This represents the first series of prospective predictions of RVF outbreaks and provides a baseline for improved early warning, control, response planning, and mitigation into the future. PMID:20682905

  19. Prediction, Assessment of the Rift Valley Fever Activity in East and Southern Africa 2006–2008 and Possible Vector Control Strategies

    PubMed Central

    Anyamba, Assaf; Linthicum, Kenneth J.; Small, Jennifer; Britch, Seth C.; Pak, Edwin; de La Rocque, Stephane; Formenty, Pierre; Hightower, Allen W.; Breiman, Robert F.; Chretien, Jean-Paul; Tucker, Compton J.; Schnabel, David; Sang, Rosemary; Haagsma, Karl; Latham, Mark; Lewandowski, Henry B.; Magdi, Salih Osman; Mohamed, Mohamed Ally; Nguku, Patrick M.; Reynes, Jean-Marc; Swanepoel, Robert

    2010-01-01

    Historical outbreaks of Rift Valley fever (RVF) since the early 1950s have been associated with cyclical patterns of the El Niño/Southern Oscillation (ENSO) phenomenon, which results in elevated and widespread rainfall over the RVF endemic areas of Africa. Using satellite measurements of global and regional elevated sea surface temperatures, elevated rainfall, and satellite derived-normalized difference vegetation index data, we predicted with lead times of 2–4 months areas where outbreaks of RVF in humans and animals were expected and occurred in the Horn of Africa, Sudan, and Southern Africa at different time periods from September 2006 to March 2008. Predictions were confirmed by entomological field investigations of virus activity and by reported cases of RVF in human and livestock populations. This represents the first series of prospective predictions of RVF outbreaks and provides a baseline for improved early warning, control, response planning, and mitigation into the future. PMID:20682905

  20. Prevalence of enteropathogens in stools of rural Maasai children under five years of age in the Maasailand region of the Kenyan Rift Valley.

    PubMed

    Joyce, T; McGuigan, K G; Elmore-Meegan, M; Conroy, R M

    1996-01-01

    Stool samples were collected during August 1994 from seventy rural Maasai children under the age of five years who were living in the Maasailand region of the Kenyan Rift Valley. Microbiological analysis was carried out on these samples to identify which intestinal pathogens were present among the infant population of the Maasai. Of the samples studied 54% were pathogen positive. The most common pathogen isolated was Giardia lamblia which was detected in 31% of the samples. Other pathogens that were detected include: Entamoeba histolytica (23%), Enteropathogenic Escherichia coli (13%), Strongyloides stercoralis (4%), Blastocystis hominis (3%) and Cryptosporidium sp (3%). Although all samples were screened for Campylobacter and rotavirus, neither pathogen was detected. Water samples were taken from all the water sources in the study area and analysed microbiologically. Results showed that all the sources were contaminated with the faecal E. coli whose populations ranged from 14 CFU/100 ml to greater than 1800 CFU/100ml. PMID:8625866

  1. Some characteristics of aftershock sequences of major earthquakes from 1994 to 2002 in the Kivu province, Western Rift Valley of Africa

    NASA Astrophysics Data System (ADS)

    Mavonga, Tuluka

    2007-07-01

    The temporal and spatial distribution of the aftershock sequences of the Ruwenzori (February 5, 1994, Mb (5.8)), Masisi (April 29, 1995, Mb (5.1)) and Kalehe (October 24, 2002, Mb (5.9)) earthquakes have been studied. It has been found that most of the aftershocks of the Ruwenzori earthquake are located on the eastern flank of the main escarpment and those of the Masisi earthquake are confined to the northwest of Lake Kivu margin where earthquake occurrence of swarm-type was normally observed. The Kalehe earthquake occurred in the central part of Lake Kivu and it was the largest earthquake observed in the Lake Kivu basin since 1900. The rate of decrease in aftershock activity with the time has shown that the p-value for Ruwenzori and Masisi earthquake equals 0.6, somehow smaller than that found in other geotectonic zones where p is close to 1. The p-value of the Kalehe earthquake is a normal value equal to 1. From an area delimited by spatial distribution of aftershocks, the linear dimension of the fault was estimated. The fault area determined in this study correlates well with those of previous studies which occurred in the Western Rift Valley of Africa including the Tanganyika and Upemba Rift.

  2. N-Glycans on the Rift Valley Fever Virus Envelope Glycoproteins Gn and Gc Redundantly Support Viral Infection via DC-SIGN

    PubMed Central

    Phoenix, Inaia; Nishiyama, Shoko; Lokugamage, Nandadeva; Hill, Terence E.; Huante, Matthew B.; Slack, Olga A.L.; Carpio, Victor H.; Freiberg, Alexander N.; Ikegami, Tetsuro

    2016-01-01

    Rift Valley fever is a mosquito-transmitted, zoonotic disease that infects humans and ruminants. Dendritic cell specific intercellular adhesion molecule 3 (ICAM-3) grabbing non-integrin (DC-SIGN) acts as a receptor for members of the phlebovirus genus. The Rift Valley fever virus (RVFV) glycoproteins (Gn/Gc) encode five putative N-glycan sequons (asparagine (N)–any amino acid (X)–serine (S)/threonine (T)) at positions: N438 (Gn), and N794, N829, N1035, and N1077 (Gc). The N-glycosylation profile and significance in viral infection via DC-SIGN have not been elucidated. Gc N-glycosylation was first evaluated by using Gc asparagine (N) to glutamine (Q) mutants. Subsequently, we generated a series of recombinant RVFV MP-12 strain mutants, which encode N-to-Q mutations, and the infectivity of each mutant in Jurkat cells stably expressing DC-SIGN was evaluated. Results showed that Gc N794, N1035, and N1077 were N-glycosylated but N829 was not. Gc N1077 was heterogeneously N-glycosylated. RVFV Gc made two distinct N-glycoforms: “Gc-large” and “Gc-small”, and N1077 was responsible for “Gc-large” band. RVFV showed increased infection of cells expressing DC-SIGN compared to cells lacking DC-SIGN. Infection via DC-SIGN was increased in the presence of either Gn N438 or Gc N1077. Our study showed that N-glycans on the Gc and Gn surface glycoproteins redundantly support RVFV infection via DC-SIGN. PMID:27223297

  3. N-Glycans on the Rift Valley Fever Virus Envelope Glycoproteins Gn and Gc Redundantly Support Viral Infection via DC-SIGN.

    PubMed

    Phoenix, Inaia; Nishiyama, Shoko; Lokugamage, Nandadeva; Hill, Terence E; Huante, Matthew B; Slack, Olga A L; Carpio, Victor H; Freiberg, Alexander N; Ikegami, Tetsuro

    2016-01-01

    Rift Valley fever is a mosquito-transmitted, zoonotic disease that infects humans and ruminants. Dendritic cell specific intercellular adhesion molecule 3 (ICAM-3) grabbing non-integrin (DC-SIGN) acts as a receptor for members of the phlebovirus genus. The Rift Valley fever virus (RVFV) glycoproteins (Gn/Gc) encode five putative N-glycan sequons (asparagine (N)-any amino acid (X)-serine (S)/threonine (T)) at positions: N438 (Gn), and N794, N829, N1035, and N1077 (Gc). The N-glycosylation profile and significance in viral infection via DC-SIGN have not been elucidated. Gc N-glycosylation was first evaluated by using Gc asparagine (N) to glutamine (Q) mutants. Subsequently, we generated a series of recombinant RVFV MP-12 strain mutants, which encode N-to-Q mutations, and the infectivity of each mutant in Jurkat cells stably expressing DC-SIGN was evaluated. Results showed that Gc N794, N1035, and N1077 were N-glycosylated but N829 was not. Gc N1077 was heterogeneously N-glycosylated. RVFV Gc made two distinct N-glycoforms: "Gc-large" and "Gc-small", and N1077 was responsible for "Gc-large" band. RVFV showed increased infection of cells expressing DC-SIGN compared to cells lacking DC-SIGN. Infection via DC-SIGN was increased in the presence of either Gn N438 or Gc N1077. Our study showed that N-glycans on the Gc and Gn surface glycoproteins redundantly support RVFV infection via DC-SIGN. PMID:27223297

  4. Adapting to climate change for food security through supplementary irrigation and changing sowing dates in the Rift Valley dry lands of Ethiopia

    NASA Astrophysics Data System (ADS)

    Muluneh Bitew, Alemayehu; Stroosnijder, Leo; keesstra, Saskia

    2015-04-01

    Studies on climate impacts and related adaptation strategies are increasingly becoming important to counteract the negative effects of climate change. In Ethiopia, climate change is likely to affect crop yields negatively. However, quantitative evidence is lacking about the ability of farm level adaptation options to offset negative impacts on food security. The MarkSimGCM weather generator was used to generate projected daily rainfall and temperature data originally taken from ECHAM5 general circulation model and ensemble mean of six models under A2 (high) and B1 (low) emission scenarios. We validated the FAO AquaCrop model and subsequently used it to predict maize yields and explore three adaptations options. Increasing plant density has the least effect on maize yield so that the density that is currently used by 'good' farmers (30,000) is recommended. The optimum level of supplemental irrigation (SI), in combination with this plant density, is application of SI when the percentage of soil water depletion reached 75% of the maximum available water in the root zone. In the future, dry spells during the Belg season increase and this has a negative effect on maize production. The predicted lower maize production due to the changing rainfall is only partly compensated by the expected increase in CO2 concentration. The shifting of sowing period of maize from the current Belg season (mostly April or May) to the first month of Kiremt season (June) can offset the predicted yield reduction caused by climate change. SI has a marginal effect in good rainfall years but using 94-111 mm of SI can avoid total crop failure in drought years. Hence, SI is an interesting option to improve food security in the Rift Valley dry lands of Ethiopia. Key words: Adaptation; Climate change; Central Rift Valley; Dry spell; Supplemental irrigation.

  5. Volcanic field elongation, vent distribution and tectonic evolution of continental rift: The Main Ethiopian Rift example

    NASA Astrophysics Data System (ADS)

    Mazzarini, Francesco; Le Corvec, Nicolas; Isola, Ilaria; Favalli, Massimiliano

    2015-04-01

    Magmatism and faulting operate in continental rifts and interact at a variety of scales, however their relationship is complex. The African rift, being the best example for both active continental rifting and magmatism, provides the ideal location to study the interplay between the two mechanisms. The Main Ethiopian Rift (MER), which connects the Afar depression in the north with the Turkana depression and Kenya Rift to the south, consists of two distinct systems of normal faults and its floor is scattered with volcanic fields formed by tens to several hundreds monogenetic, generally basaltic, small volcanoes and composite volcanoes and small calderas. The distribution of vents defines the overall shape of the volcanic field. Previous work has shown that the distribution of volcanic vents and the shape of a field are linked to its tectonic environment and its magmatic system. In order to distinguish the impact of each mechanism, we analyzed four volcanic fields located at the boundary between the central and northern MER, three of them (Debre Zeyit, Wonji and Kone) grew in the rift valley and one (Akaki) on the western rift shoulder. The elongation and shape of the fields were analyzed based on their vent distribution using the Principal Component Analysis (PCA), the Vent-to-Vent Distance (VVD), and the two dimensional symmetric Gaussian kernel density estimate methods. We extracted from these methods several parameters characterizing the spatial distribution of points (e.g., eccentricity (e), eigenvector index (evi), angular dispersion (Da)). These parameters allow to define at least three types of shape for volcanic fields: strong elongate (line and ellipse), bimodal/medium elongate (ellipse) and dispersed (circle) shapes. Applied to the natural example, these methods well differentiate each volcanic field. For example, the elongation of the field increases from shoulder to rift axis inversely to the angular dispersion. In addition, the results show that none of

  6. Low lower crustal velocity across Ethiopia: Is the Main Ethiopian Rift a narrow rift in a hot craton?

    USGS Publications Warehouse

    Keranen, K.M.; Klemperer, S.L.; Julia, J.; Lawrence, J. F.; Nyblade, A.A.

    2009-01-01

    [1] The Main Ethiopian Rift (MER) is a classic narrow rift that developed in hot, weak lithosphere, not in the initially cold, thick, and strong lithosphere that would be predicted by common models of rift mode formation. Our new 1-D seismic velocity profiles from Rayleigh wave/receiver function joint inversion across the MER and the Ethiopian Plateau indicate that hot lower crust and upper mantle are present throughout the broad region affected by Oligocene flood basalt volcanism, including both the present rift and the adjacent Ethiopian Plateau hundreds of kilometers from the rift valley. The region of hot lithosphere closely corresponds to the region of flood basalt volcanism, and we interpret that the volcanism and thermal perturbation were jointly caused by impingement of the Afar plume head. Across the affected region, Vs is 3.6-3.8 km/s in the lowermost crust and ???4.3 km/s in the uppermost mantle, both ??0.3 km/s lower than in the eastern and western branches of the East African Rift System to the south. We interpret the low Vs in the lower crust and upper mantle as indicative of hot lithosphere with partial melt. Our results lead to a hybrid rift mode, in which the brittle upper crust has developed as a narrow rift along the Neoproterozoic suture between East and West Gondwana, while at depth lithospheric deformation is distributed over the broad region (??400 km wide) thermally perturbed by the broad thermal upwelling associated with the Afar plume head. Development of both the East African Rift System to the south (in cold, strong lithosphere) and the MER to the north (in hot, weak lithosphere) as narrow rifts, despite their vastly different initial thermal states and depth-integrated lithospheric strength, indicates that common models of rift mode formation that focus only on temperature, thickness, and vertical strength profiles do not apply to these classic continental rifts. Instead, inherited structure and associated lithospheric weaknesses are

  7. Oligocene Termite Nests with In Situ Fungus Gardens from the Rukwa Rift Basin, Tanzania, Support a Paleogene African Origin for Insect Agriculture

    PubMed Central

    Roberts, Eric M.; Todd, Christopher N.; Aanen, Duur K.; Nobre, Tânia; Hilbert-Wolf, Hannah L.; O’Connor, Patrick M.; Tapanila, Leif; Mtelela, Cassy; Stevens, Nancy J.

    2016-01-01

    Based on molecular dating, the origin of insect agriculture is hypothesized to have taken place independently in three clades of fungus-farming insects: the termites, ants or ambrosia beetles during the Paleogene (66–24 Ma). Yet, definitive fossil evidence of fungus-growing behavior has been elusive, with no unequivocal records prior to the late Miocene (7–10 Ma). Here we report fossil evidence of insect agriculture in the form of fossil fungus gardens, preserved within 25 Ma termite nests from southwestern Tanzania. Using these well-dated fossil fungus gardens, we have recalibrated molecular divergence estimates for the origins of termite agriculture to around 31 Ma, lending support to hypotheses suggesting an African Paleogene origin for termite-fungus symbiosis; perhaps coinciding with rift initiation and changes in the African landscape. PMID:27333288

  8. Oligocene Termite Nests with In Situ Fungus Gardens from the Rukwa Rift Basin, Tanzania, Support a Paleogene African Origin for Insect Agriculture.

    PubMed

    Roberts, Eric M; Todd, Christopher N; Aanen, Duur K; Nobre, Tânia; Hilbert-Wolf, Hannah L; O'Connor, Patrick M; Tapanila, Leif; Mtelela, Cassy; Stevens, Nancy J

    2016-01-01

    Based on molecular dating, the origin of insect agriculture is hypothesized to have taken place independently in three clades of fungus-farming insects: the termites, ants or ambrosia beetles during the Paleogene (66-24 Ma). Yet, definitive fossil evidence of fungus-growing behavior has been elusive, with no unequivocal records prior to the late Miocene (7-10 Ma). Here we report fossil evidence of insect agriculture in the form of fossil fungus gardens, preserved within 25 Ma termite nests from southwestern Tanzania. Using these well-dated fossil fungus gardens, we have recalibrated molecular divergence estimates for the origins of termite agriculture to around 31 Ma, lending support to hypotheses suggesting an African Paleogene origin for termite-fungus symbiosis; perhaps coinciding with rift initiation and changes in the African landscape. PMID:27333288

  9. Seismic anisotropy of the lithosphere/asthenosphere system beneath the Rwenzori region of the East-African Rift

    NASA Astrophysics Data System (ADS)

    Homuth, Benjamin; Löbl, Ulrike; Batte, Arthur; Link, Klemens; Kasereka, Celestine; Rümpker, Georg

    2014-05-01

    We present results from a temporary seismic network of 32 broad-band stations located around the Rwenzori region of the Albertine rift at the border between Uganda and DR Congo. The study aims to constrain seismic anisotropy and mantle deformation processes in relation to the formation of the rift zone. Shear-wave splitting measurements from local and teleseismic earthquakes are used to investigate the seismic anisotropy in the crust and upper mantle beneath the Rwenzori region. At most stations, shear-wave splitting parameters obtained from individual earthquakes exhibit only minor variations with backazimuth. We therefore employ a joint inversion of SKS waveforms to derive hypothetical one-layer parameters. The corresponding fast polarizations are generally rift-parallel and the average delay time is about 1 s. On the other hand, shear phases from local events within the crust are characterized by a bimodal pattern of fast polarizations and an average delay time of 0.04 s. This observation suggests that the dominant source region for seismic anisotropy beneath the rift is located within the mantle. We use finite-frequency waveform modeling to test different models of anisotropy within the lithosphere/asthenosphere system of the rift. The results show that the rift-parallel fast polarizations are consistent with HTI anisotropy caused by rift-parallel magmatic intrusions or lenses located within the lithospheric mantle - as it would be expected during the early stages of continental rifting. Furthermore, the short-scale spatial variations in the fast polarizations observed in the southern part of the study area can be explained by effects due to sedimentary basins of low isotropic velocity in combination with a shift in the orientation of anisotropic fabrics in the upper mantle. A uniform anisotropic layer in relation to large-scale asthenospheric mantle flow is less consistent with the observed splitting parameters.

  10. Extension and Basin Evolution of the East Kivu Graben, Rwanda, East African Rift: Results of New Multichannel Seismic Reflection Imaging

    NASA Astrophysics Data System (ADS)

    Scholz, C. A.; Zhang, X.; Wood, D.; Mburu, D.

    2012-12-01

    The East Kivu Graben resides within the eastern part of Lake Kivu, the highest Great Lake in the western branch of the East African Rift. The lake is more than 440 m deep in the East Kivu Basin, with a catchment comprised of Precambrian metasedimentary rocks and late-Cenozoic volcanics. Lake Kivu is renowned for its uniquely stratified water column, which is charged with considerable quantities of dissolved CO2 and methane, the former due to magmatic degassing. In February and March 2012 514 km of single- and multi-channel seismic reflection data were acquired in the Rwandan waters of Lake Kivu. The 24-fold multichannel seismic data were acquired aboard a modular research vessel, using a 600 m-long hydrophone streamer and single 40 cubic inch airgun. Extension in the East Kivu basin is largely accommodated along a major N-S striking, east-dipping boundary fault observed along the eastern edge of Iwawa Island, and extending for ~40 km along the length of the basin. Numerous intrabasinal normal faults occur to the east of the boundary fault, commonly displacing the lake floor and controlling the location of modern sublacustrine channels. The deepest sedimentary reflections observed on the new MCS data are 1.2-1.5 km below lake floor, near the center of the basin and boundary fault. Crystalline basement is not observed in these deepest areas however, suggesting the presence of a substantial sedimentary section below the imaged strata. Stratal surfaces dip steeply to the west over large areas of the half-graben basin. An acoustically transparent seismic sequence up to ~25 m thick is observed at the lake floor, which overlies a pronounced erosional unconformity over much of the basin. Some intrabasinal normal faults are draped by and do not penetrate the upper sequences, indicating several generations of fault activity in the basin. The late-Pleistocene exposure surface likely correlates to the previous lake level low stage that persisted prior to volcanic damming by

  11. Parameters influencing the location and characteristics of volcanic eruptions in a youthful extensional setting: Insights from the Virunga Volcanic Province, in the Western Branch of the East African Rift System

    NASA Astrophysics Data System (ADS)

    Smets, Benoît; d'Oreye, Nicolas; Kervyn, Matthieu; Kervyn, François

    2016-04-01

    The East African Rift System (EARS) is often mentioned as the modern archetype for rifting and continental break-up (Calais et al., 2006, GSL Special Publication 259), showing the complex interaction between rift faults, magmatism and pre-existing structures of the basement. Volcanism in the EARS is characterized by very active volcanoes, several of them being among the most active on Earth (Wright et al., 2015, GRL 42). Such intense volcanic activity provides useful information to study the relationship between rifting, magmatism and volcanism. This is the case of the Virunga Volcanic Province (VVP) located in the central part of the Western Branch of the EARS, which hosts two of the most active African volcanoes, namely Nyiragongo and Nyamulagira. Despite the intense eruptive activity in the VVP, the spatial distribution of volcanism and its relationship with the extensional setting remain little known. Here we present a study of the interaction between tectonics, magmatism and volcanism at the scale of the Kivu rift section, where the VVP is located, and at the scale of a volcano, by studying the dense historical eruptive activity of Nyamulagira. Both the complex Precambrian basement and magmatism appear to contribute to the development of the Kivu rift. The presence of transfer zones north and south of the Lake Kivu rift basin favoured the development of volcanic provinces at these locations. Rift faults, including reactivated Precambrian structures influenced the location of volcanism within the volcanic provinces and the rift basin. At a more local scale, the historical eruptive activity of Nyamulagira highlights that, once a composite volcano developed, the gravitational stress field induced by edifice loading becomes the main parameter that influence the location, duration and lava volume of eruptions.

  12. Geochemistry of 24 Ma Basalts from Northeast Egypt: Implications for Small-Scale Convection Beneath the East African Rift System

    NASA Astrophysics Data System (ADS)

    Endress, C. A.; Furman, T.; Ali Abu El-Rus, M.

    2009-12-01

    Basalts ~24 Ma in the Cairo-Suez and Fayyum districts of NE Egypt represent the youngest and northernmost lavas potentially associated with the initiation of rifting of the Red Sea. The age of these basalts corresponds to a time period of significant regional magmatism that occurred subsequent to emplacement of 30 Ma flood basalts attributed to the Afar Plume in Ethiopia and Yemen. Beginning ~28 Ma, widespread magmatism occurred across supra-equatorial Africa in Hoggar (Algeria), Tibesti (Chad), Darfur (Sudan), Turkana (Kenya) and Samalat, Bahariya, Quesir and the Sinai Peninsula (Egypt) (e.g. Allegre et al., 1981; Meneisy, 1990; Baldridge et al., 1991; Wilson and Guiraud, 1992; Furman et al., 2006; Lucassen et al., 2008). Available geochemical and isotopic data indicate that Hoggar and Darfur basalts are similar to Turkana lavas, although no direct link between the N African lavas and the Kenya Plume has been made. New geochemical data on the NE Egyptian basalts provide insight into the thermochemical, isotopic, and mineralogical characteristics of the mantle beneath the region in which they were emplaced. The basalts are subalkaline with OIB-like incompatible trace element abundances and homogeneous major element, trace element and isotopic geochemistry. They display relatively flat ITE patterns, with notable positive Pb and negative P anomalies. Isotopic (143Nd/144Nd = 0.51274-0.51285, 87Sr/86Sr = 0.7049-0.7050) and trace element signatures (Ce/Pb = 16-22, Ba/Nb = 9-14, and La/Nb = 0.9-1.0) are consistent with melting of a sub-lithospheric source that has been slightly contaminated by continental crust during ascent and emplacement. The Pb isotopic ratios (206Pb/204Pb = 18.53-18.62, 207Pb/204Pb = 15.59-15.64, and 208Pb/204Pb = 38.80-39.00) in the Egyptian basalts are close to the range of those found in the 30 Ma Ethiopian flood basalts, which are distinct from the more highly radiogenic, high-μ type signature seen in basalts from Turkana, Darfur, and Hoggar

  13. Seismic Anisotropy of the Lithosphere/Asthenosphere System Beneath the Rwenzori Region of the East-African Rift

    NASA Astrophysics Data System (ADS)

    Homuth, B.; Löbl, U.; Batte, A.; Link, K.; Kasereka, C.; Rumpker, G.

    2014-12-01

    We present results from a temporary seismic network of 32 broad-band stations located around the Rwenzori region of the Albertine rift at the border between Uganda and DR Congo. The study aims to constrain seismic anisotropy and mantle deformation processes in relation to the formation of the rift zone. Shear-wave splitting measurements from local and teleseismic earthquakes are used to investigate the seismic anisotropy in the crust and upper mantle beneath the Rwenzori region. At most stations, shear-wave splitting parameters obtained from individual earthquakes exhibit only minor variations with backazimuth. We therefore employ a joint inversion of SKS waveforms to derive hypothetical one-layer parameters. The corresponding fast polarizations are generally rift-parallel and the average delay time is about 1 s. On the other hand, shear phases from local events within the crust are characterized by an average delay time of 0.04 s. This observation suggests that the dominant source region for seismic anisotropy beneath the rift is located within the mantle. We use finite-frequency waveform modeling to test different models of anisotropy within the lithosphere/asthenosphere system of the rift. The results show that the rift-parallel fast polarizations are consistent with HTI anisotropy caused by magmatic intrusions or lenses located within the lithospheric mantle - as it would be expected during the early stages of continental rifting. Furthermore, the short-scale spatial variations in the fast polarizations observed in the southern part of the study area can be explained by effects due to sedimentary basins of low isotropic velocity in combination with a shift in the orientation of anisotropic fabrics in the upper mantle. A uniform anisotropic layer in relation to large-scale asthenospheric mantle flow is less consistent with the observed splitting parameters.

  14. Seismic anisotropy across the east African plateau from shear wave splitting analysis

    NASA Astrophysics Data System (ADS)

    Bagley, B. C.; Nyblade, A.; Mulibo, G.; Tugume, F.

    2011-12-01

    Previous studies of the east African plateau reveal complicated patterns of seismic anisotropy that are not easily explained by a single mechanism. The pattern is defined by rift-parallel fast directions for stations within or near Cenozoic rift valleys, and near-null results in Precambrian terrains away from the rift. Data from 65 temporary Africa Array stations deployed between 2007 and 2011 are being used to make new shear wave splitting measurements. The stations span the east African plateau and cover both the eastern and western branches of the east African rift system, as well as unrifted Proterozoic and Archean terrains in Uganda, Kenya, Tanzania, and Zambia. Through analysis of shear wave splitting we will better constrain the distribution of seismic anisotropy, and and from it gain new insight into the tectonic evolution of east Africa.

  15. Constraining the Composition of the Subcontinental Lithospheric Mantle Beneath the East African Rift: FTIR Analysis of Water in Spinel Peridotite Mantle Xenoliths

    NASA Technical Reports Server (NTRS)

    Erickson, Stephanie Gwen; Nelson, Wendy R.; Peslier, Anne H.; Snow, Jonathan E.

    2014-01-01

    The East African Rift System was initiated by the impingement of the Afar mantle plume on the base of the non-cratonic continental lithosphere (assembled during the Pan-African Orogeny), producing over 300,000 kmof continental flood basalts approx.30 Ma ago. The contribution of the subcontinental lithospheric mantle (SCLM) to this voluminous period of volcanism is implied based on basaltic geochemical and isotopic data. However, the role of percolating melts on the SCLM composition is less clear. Metasomatism is capable of hybridizing or overprinting the geochemical signature of the SCLM. In addition, models suggest that adding fluids to lithospheric mantle affects its stability. We investigated the nature of the SCLM using Fourier transform infrared spectrometry (FTIR) to measure water content in mantle xenoliths entrained in young (1 Ma) basaltic lavas from the Ethiopian volcanic province. The mantle xenoliths consist dominantly of spinel lherzolites and are composed of nominally anhydrous minerals, which can contain trace water as H in mineral defects. Eleven mantle xenoliths come from the Injibara-Gojam region and two from the Mega-Sidamo region. Water abundances of olivines in six samples are 1-5ppm H2O while the rest are below the limit of detection (<0.5 ppm H2O); orthopyroxene and clinopyroxene contain 80-238 and 111-340 ppm wt H2O, respectively. Two xenoliths have higher water contents - a websterite (470 ppm) and dunite (229 ppm), consistent with involvement of ascending melts. The low water content of the upper SCLM beneath Ethiopia is as dry as the oceanic mantle except for small domains represented by percolating melts. Consequently, rifting of the East African lithosphere may not have been facilitated by a hydrated upper mantle.

  16. Mapping Extensional Structures in the Makgadikgadi Pans, Botswana with remote sensing and aeromagnetic data: Implication for the continuation of the East African Rift System in southern Africa

    NASA Astrophysics Data System (ADS)

    Fetkovich, E. J.; Atekwana, E. A.; Abdelsalam, M. G.; Atekwana, E. A.; Katumwehe, A. B.

    2015-12-01

    We used Shuttle Radar Topography Mission (SRTM) Digital Elevation Model (DEM) and aeromagnetic data to map extensional structures in the Makgadikgadi Pans in northeastern Botswana. These pans are a major morphological feature in Southern Africa characterized by the presence of low lying and flat topography with the highest elevation of 945 m. This topography was a result of multiple filling and desiccation of paleo-lakes that accompanied alternation of wetter and dryer climate during the Late Quaternary period. The objective of our study was to map the extent and distribution of normal faults using their morphological expression and magnetic signature, and examine their relationship with paleo-shorelines of the pans. We: (1) Created a hill shade relief map from the SRTM DEM; (2) Extracted regional NW-SE trending topographic profiles across the pans; (3) Constructed displacement profiles for major normal faults; and (4) Created tilt derivative images from the aeromagnetic data. We found that: (1) The northeastern part of the pan is dissected by three morphologically-defined NE-trending normal faults. The along strike continuity of these faults is in the range of 75 and 170 km and they are spaced at ~30 km apart from each other. (2) The topographic profiles suggest that the exposed minimum vertical displacement (EMVD), defined by poorly developed escarpments, is in the range of 0 m and 49 m. (3) The displacement profiles of the faults is characterized by maximum EMVD in the middle of the faults and that it decays towards the fault tips. These faults are also apparent in the aeromagnetic maps where they seem to displace E-W trending Karoo-age dikes. (4) At least the outer paleo-shoreline of the pans is modified by the NE-trending faults. This suggests that the faults are younger than the paleo-shorelines, which is suggested to have been developed between 500 and 100 ka. Traditionally, the southwestern extension of the East African Rift System has been assigned to the

  17. Structural style of the Turkana Rift, Kenya

    SciTech Connect

    Dunkelman, T.J.; Karson, J.A.; Rosendahl, B.R.

    1988-03-01

    Multifold seismic reflection and geologic mapping in part of the eastern branch of the East African Rift system of northern Kenya reveal a major rift structure containing at least 3 km of Neogene sediment fill beneath Lake Turkana. This includes a series of half-graben basins, with centrally located quaternary volcanic centers, which are linked end-to-end by structural accommodation zones. Whereas the geometry of rifting is similar to that of the nonvolcanic western branch of the East African Rift system, the Turkana half-grabens are much smaller and may reflect extension of a thinner lithosphere or development of more closely spaced fracture patterns during rift evolution, or both.

  18. A Pan African age for the HP-HT granulite gneisses of Zabargad island: implications for the early stages of the Red Sea rifting

    NASA Astrophysics Data System (ADS)

    Lancelot, Joël R.; Bosch, Delphine

    1991-12-01

    Up to now the age of granulite gneisses intruded by the Zabargad mantle diapir has been an unsolved problem. These gneisses may represent either a part of the adjacent continental crust primarily differentiated during the Pan African orogeny, or new crust composed of Miocene clastic sediments deposited in a developing rift, crosscut by a diabase dike swarm and gabbroic intrusions, and finally metamorphosed and deformed by the mantle diapir. Previous geochronological results obtained on Zabargad island and Al Lith and Tihama-Asir complexes (Saudi Arabia) suggest an Early Miocene age of emplacement for the Zabargad mantle diapir during the early opening of the Red Sea rift. In contrast, Sm sbnd Nd and Rb sbnd Sr internal isochrons yield Pan African dates for felsic and basic granulites collected 500-600 m from the contact zone with the peridotites. Devoid of evidence for retrograde metamorphic, minerals from a felsic granulite provide well-defined Rb sbnd Sr and Sm sbnd Nd dates of 655 ± 8 and 699 ± 34 Ma for the HP-HT metamorphic event (10 kbar, 850°C). The thermal event related to the diapir emplacement is not recorded in the Sm sbnd Nd and Rb sbnd Sr systems of the studied gneisses; in contrast, the development of a retrograde amphibolite metamorphic paragenesis strongly disturbed the Rb sbnd Sr isotopic system of the mafic granulite. The initial 143Nd/ 144Nd ratio of the felsic granulite is higher than the contemporaneous value for CHUR and is in agreement with other Nd isotopic data for samples of upper crust from the Arabian shield. This result suggests that source rocks of the felsic granulite were derived at 1.0 to 1.2 Ga from either an average MORB-type mantle or a local 2.2 Ga LREE-depleted mantle. Zabargad gneisses represent a part of the disrupted lower continental crust of the Pan African Afro-Arabian shield. During early stages of the Red Sea rifting in the Miocene, these Precambrian granulites were intruded and dragged upwards by a rising peridotite

  19. Clinopyroxene-host disequilibrium (Sr-Nd-Pb isotope systematics) in ultra-potassic magmas from East-African Rift: Implications for magma mixing and source heterogeneity

    NASA Astrophysics Data System (ADS)

    Muravyeva, Natalya; Belyatsky, Boris; Senin, Valeriy

    2014-05-01

    Nd, Pb and Sr isotope ratios have been determined for kamafugite lava and clinopyroxene and phlogopite phenocrysts from Toro-Ankole and Virunga volcanic fields of the East African Rift. The whole rock Sr - Nd isotopic signatures of kamafugites (87Sr/86Sr: 0.70463 - 0.70536; 143Nd/144Nd: 0.51249 - 0.51255) suggest derivation from an EM1-type mantle source. In contrast, Pb isotopic compositions of the same samples (206Pb/204Pb: 19.00 - 19.57; 207Pb/204Pb: 15.69 - 15.74; 208Pb/204Pb: 39.30 - 40.26) reveal a similarity to EM2-type mantle. New Nd, Pb and Sr isotopic data for clinopyroxene (87Sr/86Sr: 0.70473 - 0.70503; 143Nd/144Nd: 0.51250 - 0.51254; 206Pb/204Pb: 18.04 - 18.17; 207Pb/204Pb: 15.58 - 15.60; 208Pb/204Pb: 38.09 - 38.23) suggest derivation from an EM1-like source, and indicate Sr and Pb isotope disequilibrium between clinopyroxene and corresponding host rock. Moreover, clinopyroxenes demonstrating a greater degree of isotopic disequilibrium with their host rock are more sodic in composition. The isotopic disequilibrium is corroborated by the presence of chemical zoning within clinopyroxene, which suggests rapid magma ascent rates preventing melt homogenization. The Pb isotopic ratios for both mineral and corresponding whole rock, together with published data on East African rift-related alkaline centers, define a trend interpreted to represent a mixing line for melts derived from sources such as EM1 and as HIMU. The similar isotopic compositions for clinopyroxene from the different volcanic rocks within the East African Rift suggest the existence of a common, older mantle source for their parental melts. The origin of these melts can be attributed to an enrichment event ~ 400-500 Ma, i.e., significantly prior the younger (Quaternary) ultrapotassic magmatism. Our preferred interpretation for the results reported here involves the mixing of the melts derived from EM1- and HIMU-like sources, which were rapidly transported to the Earth's surface. The primary

  20. Combining Hydrology and Mosquito Population Models to Identify the Drivers of Rift Valley Fever Emergence in Semi-Arid Regions of West Africa

    PubMed Central

    Soti, Valérie; Tran, Annelise; Degenne, Pascal; Chevalier, Véronique; Lo Seen, Danny; Thiongane, Yaya; Diallo, Mawlouth; Guégan, Jean-François; Fontenille, Didier

    2012-01-01

    Background Rift Valley fever (RVF) is a vector-borne viral zoonosis of increasing global importance. RVF virus (RVFV) is transmitted either through exposure to infected animals or through bites from different species of infected mosquitoes, mainly of Aedes and Culex genera. These mosquitoes are very sensitive to environmental conditions, which may determine their presence, biology, and abundance. In East Africa, RVF outbreaks are known to be closely associated with heavy rainfall events, unlike in the semi-arid regions of West Africa where the drivers of RVF emergence remain poorly understood. The assumed importance of temporary ponds and rainfall temporal distribution therefore needs to be investigated. Methodology/Principal Findings A hydrological model is combined with a mosquito population model to predict the abundance of the two main mosquito species (Aedes vexans and Culex poicilipes) involved in RVFV transmission in Senegal. The study area is an agropastoral zone located in the Ferlo Valley, characterized by a dense network of temporary water ponds which constitute mosquito breeding sites. The hydrological model uses daily rainfall as input to simulate variations of pond surface areas. The mosquito population model is mechanistic, considers both aquatic and adult stages and is driven by pond dynamics. Once validated using hydrological and entomological field data, the model was used to simulate the abundance dynamics of the two mosquito species over a 43-year period (1961–2003). We analysed the predicted dynamics of mosquito populations with regards to the years of main outbreaks. The results showed that the main RVF outbreaks occurred during years with simultaneous high abundances of both species. Conclusion/Significance Our study provides for the first time a mechanistic insight on RVFV transmission in West Africa. It highlights the complementary roles of Aedes vexans and Culex poicilipes mosquitoes in virus transmission, and recommends the

  1. Cross-Sectional Survey of Rift Valley Fever Virus Exposure in Bodhei Village Located in a Transitional Coastal Forest Habitat in Lamu County, Kenya

    PubMed Central

    Muiruri, Samuel; Kabiru, Ephantus W.; Muchiri, Eric M.; Hussein, Hassan; Kagondu, Frederick; LaBeaud, A. Desirée; King, Charles H.

    2015-01-01

    Few studies have focused on Rift Valley fever virus (RVFV) transmission in less arid, transitional landscapes surrounding known high-risk regions. The objective of this study was to identify evidence of RVFV exposure in Bodhei Village in a forested area at the edge of the RVFV-epidemic Garissa region. In a household cluster-based survey conducted between epidemics in early 2006, 211 participants were enrolled. Overall seroprevalence for anti-RVFV was high (18%) and comparable with rates in the more arid, dense brush regions farther north. Seroprevalence of adults was 28%, whereas that of children was significantly lower (3%; P < 0.001); the youngest positive child was age 3 years. Males were more likely to be seropositive than females (25% versus 11%; P < 0.01), and animal husbandry activities (birthing, sheltering, and butchering) were strongly associated with seropositivity. The results confirm that significant RVFV transmission occurs outside of recognized high-risk areas and independent of known epidemic periods. PMID:25535309

  2. Common host-derived chemicals increase catches of disease-transmitting mosquitoes and can improve early warning systems for Rift Valley fever virus.

    PubMed

    Tchouassi, David P; Sang, Rosemary; Sole, Catherine L; Bastos, Armanda D S; Teal, Peter E A; Borgemeister, Christian; Torto, Baldwyn

    2013-01-01

    Rift Valley fever (RVF), a mosquito-borne zoonosis, is a major public health and veterinary problem in sub-Saharan Africa. Surveillance to monitor mosquito populations during the inter-epidemic period (IEP) and viral activity in these vectors is critical to informing public health decisions for early warning and control of the disease. Using a combination of field bioassays, electrophysiological and chemical analyses we demonstrated that skin-derived aldehydes (heptanal, octanal, nonanal, decanal) common to RVF virus (RVFV) hosts including sheep, cow, donkey, goat and human serve as potent attractants for RVFV mosquito vectors. Furthermore, a blend formulated from the four aldehydes and combined with CO(2)-baited CDC trap without a light bulb doubled to tripled trap captures compared to control traps baited with CO(2) alone. Our results reveal that (a) because of the commonality of the host chemical signature required for attraction, the host-vector interaction appears to favor the mosquito vector allowing it to find and opportunistically feed on a wide range of mammalian hosts of the disease, and (b) the sensitivity, specificity and superiority of this trapping system offers the potential for its wider use in surveillance programs for RVFV mosquito vectors especially during the IEP. PMID:23326620

  3. Common Host-Derived Chemicals Increase Catches of Disease-Transmitting Mosquitoes and Can Improve Early Warning Systems for Rift Valley Fever Virus

    PubMed Central

    Tchouassi, David P.; Sang, Rosemary; Sole, Catherine L.; Bastos, Armanda D. S.; Teal, Peter E. A.; Borgemeister, Christian; Torto, Baldwyn

    2013-01-01

    Rift Valley fever (RVF), a mosquito-borne zoonosis, is a major public health and veterinary problem in sub-Saharan Africa. Surveillance to monitor mosquito populations during the inter-epidemic period (IEP) and viral activity in these vectors is critical to informing public health decisions for early warning and control of the disease. Using a combination of field bioassays, electrophysiological and chemical analyses we demonstrated that skin-derived aldehydes (heptanal, octanal, nonanal, decanal) common to RVF virus (RVFV) hosts including sheep, cow, donkey, goat and human serve as potent attractants for RVFV mosquito vectors. Furthermore, a blend formulated from the four aldehydes and combined with CO2-baited CDC trap without a light bulb doubled to tripled trap captures compared to control traps baited with CO2 alone. Our results reveal that (a) because of the commonality of the host chemical signature required for attraction, the host-vector interaction appears to favor the mosquito vector allowing it to find and opportunistically feed on a wide range of mammalian hosts of the disease, and (b) the sensitivity, specificity and superiority of this trapping system offers the potential for its wider use in surveillance programs for RVFV mosquito vectors especially during the IEP. PMID:23326620

  4. Co-housing of Rift Valley Fever Virus Infected Lambs with Immunocompetent or Immunosuppressed Lambs Does Not Result in Virus Transmission.

    PubMed

    Wichgers Schreur, Paul J; van Keulen, Lucien; Kant, Jet; Oreshkova, Nadia; Moormann, Rob J M; Kortekaas, Jeroen

    2016-01-01

    Rift Valley fever virus (RVFV) is transmitted among susceptible animals by mosquito vectors. Although the virus can be isolated from nasal and oral swabs of infected animals and is known to be highly infectious when administered experimentally via oral or respiratory route, horizontal transmission of the virus is only sporadically reported in literature. We considered that immunosuppression resulting from stressful conditions in the field may increase the susceptibility to horizontally transmitted RVFV. Additionally, we reasoned that horizontal transmission may induce immune responses that could affect the susceptibility of contact-exposed animals to subsequent infection via mosquito vectors. To address these two hypotheses, viremic lambs were brought into contact with sentinel lambs. One group of sentinel lambs was treated with the immunosuppressive synthetic glucocorticosteroid dexamethasone and monitored for signs of disease and presence of virus in the blood and target organs. Another group of contact-exposed sentinel lambs remained untreated for three weeks and was subsequently challenged with RVFV. We found that none of the dexamethasone-treated contact-exposed lambs developed detectable viremia, antibody responses or significant increases in cytokine mRNA levels. Susceptibility of immunocompetent lambs to RVFV infection was not influenced by previous contact-exposure. Our results are discussed in light of previous findings. PMID:27014211

  5. Co-housing of Rift Valley Fever Virus Infected Lambs with Immunocompetent or Immunosuppressed Lambs Does Not Result in Virus Transmission

    PubMed Central

    Wichgers Schreur, Paul J.; van Keulen, Lucien; Kant, Jet; Oreshkova, Nadia; Moormann, Rob J. M.; Kortekaas, Jeroen

    2016-01-01

    Rift Valley fever virus (RVFV) is transmitted among susceptible animals by mosquito vectors. Although the virus can be isolated from nasal and oral swabs of infected animals and is known to be highly infectious when administered experimentally via oral or respiratory route, horizontal transmission of the virus is only sporadically reported in literature. We considered that immunosuppression resulting from stressful conditions in the field may increase the susceptibility to horizontally transmitted RVFV. Additionally, we reasoned that horizontal transmission may induce immune responses that could affect the susceptibility of contact-exposed animals to subsequent infection via mosquito vectors. To address these two hypotheses, viremic lambs were brought into contact with sentinel lambs. One group of sentinel lambs was treated with the immunosuppressive synthetic glucocorticosteroid dexamethasone and monitored for signs of disease and presence of virus in the blood and target organs. Another group of contact-exposed sentinel lambs remained untreated for three weeks and was subsequently challenged with RVFV. We found that none of the dexamethasone-treated contact-exposed lambs developed detectable viremia, antibody responses or significant increases in cytokine mRNA levels. Susceptibility of immunocompetent lambs to RVFV infection was not influenced by previous contact-exposure. Our results are discussed in light of previous findings. PMID:27014211

  6. Practical considerations, column studies and natural organic material competition for fluoride removal with bone char and aluminum amended materials in the Main Ethiopian Rift Valley.

    PubMed

    Brunson, Laura R; Sabatini, David A

    2014-08-01

    The fluoride removal capacities of three materials, bone char (BC), aluminum oxide coated bone char (ACBC) and aluminum oxide impregnated wood char (AIWC), along with activated alumina (AA) as a baseline material, were investigated in batch and column studies, including comparison between synthetic and natural groundwater. Results suggest that in all cases the laboratory column results exhibited higher fluoride removal efficiency than the field studies conducted in the Ethiopian Rift Valley. Further studies indicate that the reduced effectiveness in the field was likely due to a combination of the high pH of groundwater (8.2) and the presence of competing ions (sulfate). Batch studies testing potential competition from natural organic material (NOM) showed no statistical evidence of NOM competition with BC and minor evidence of competition with ACBC and AIWC. To provide evidence for using Rapid Scale Small Column Test (RSSCT) principles for BC two different column volume and particle sizes were used. The results indicate that RSSCT scaling equations, developed for activated carbon, are applicable for BC removal of fluoride. These results thus provide valuable insights for translating laboratory results of novel sorbents for mitigating fluoride tainted groundwater in the field. PMID:24393599

  7. The Rift Valley fever accessory proteins NSm and P78/NSm-GN are distinct determinants of virus propagation in vertebrate and invertebrate hosts

    PubMed Central

    Kreher, Felix; Tamietti, Carole; Gommet, Céline; Guillemot, Laurent; Ermonval, Myriam; Failloux, Anna-Bella; Panthier, Jean-Jacques; Bouloy, Michèle; Flamand, Marie

    2014-01-01

    Rift Valley fever virus (RVFV) is an enzootic virus circulating in Africa that is transmitted to its vertebrate host by a mosquito vector and causes severe clinical manifestations in humans and ruminants. RVFV has a tripartite genome of negative or ambisense polarity. The M segment contains five in-frame AUG codons that are alternatively used for the synthesis of two major structural glycoproteins, GN and GC, and at least two accessory proteins, NSm, a 14-kDa cytosolic protein, and P78/NSm-GN, a 78-kDa glycoprotein. To determine the relative contribution of P78 and NSm to RVFV infectivity, AUG codons were knocked out to generate mutant viruses expressing various sets of the M-encoded proteins. We found that, in the absence of the second AUG codon used to express NSm, a 13-kDa protein corresponding to an N-terminally truncated form of NSm, named NSm′, was synthesized from AUG 3. None of the individual accessory proteins had any significant impact on RVFV virulence in mice. However, a mutant virus lacking both NSm and NSm′ was strongly attenuated in mice and grew to reduced titers in murine macrophages, a major target cell type of RVFV. In contrast, P78 was not associated with reduced viral virulence in mice, yet it appeared as a major determinant of virus dissemination in mosquitoes. This study demonstrates how related accessory proteins differentially contribute to RVFV propagation in mammalian and arthropod hosts. PMID:26038497

  8. A ΩXaV motif in the Rift Valley fever virus NSs protein is essential for degrading p62, forming nuclear filaments and virulence.

    PubMed

    Cyr, Normand; de la Fuente, Cynthia; Lecoq, Lauriane; Guendel, Irene; Chabot, Philippe R; Kehn-Hall, Kylene; Omichinski, James G

    2015-05-12

    Rift Valley fever virus (RVFV) is a single-stranded RNA virus capable of inducing fatal hemorrhagic fever in humans. A key component of RVFV virulence is its ability to form nuclear filaments through interactions between the viral nonstructural protein NSs and the host general transcription factor TFIIH. Here, we identify an interaction between a ΩXaV motif in NSs and the p62 subunit of TFIIH. This motif in NSs is similar to ΩXaV motifs found in nucleotide excision repair (NER) factors and transcription factors known to interact with p62. Structural and biophysical studies demonstrate that NSs binds to p62 in a similar manner as these other factors. Functional studies in RVFV-infected cells show that the ΩXaV motif is required for both nuclear filament formation and degradation of p62. Consistent with the fact that the RVFV can be distinguished from other Bunyaviridae-family viruses due to its ability to form nuclear filaments in infected cells, the motif is absent in the NSs proteins of other Bunyaviridae-family viruses. Taken together, our studies demonstrate that p62 binding to NSs through the ΩXaV motif is essential for degrading p62, forming nuclear filaments and enhancing RVFV virulence. In addition, these results show how the RVFV incorporates a simple motif into the NSs protein that enables it to functionally mimic host cell proteins that bind the p62 subunit of TFIIH. PMID:25918396

  9. A ΩXaV motif in the Rift Valley fever virus NSs protein is essential for degrading p62, forming nuclear filaments and virulence

    PubMed Central

    Cyr, Normand; de la Fuente, Cynthia; Lecoq, Lauriane; Guendel, Irene; Chabot, Philippe R.; Kehn-Hall, Kylene; Omichinski, James G.

    2015-01-01

    Rift Valley fever virus (RVFV) is a single-stranded RNA virus capable of inducing fatal hemorrhagic fever in humans. A key component of RVFV virulence is its ability to form nuclear filaments through interactions between the viral nonstructural protein NSs and the host general transcription factor TFIIH. Here, we identify an interaction between a ΩXaV motif in NSs and the p62 subunit of TFIIH. This motif in NSs is similar to ΩXaV motifs found in nucleotide excision repair (NER) factors and transcription factors known to interact with p62. Structural and biophysical studies demonstrate that NSs binds to p62 in a similar manner as these other factors. Functional studies in RVFV-infected cells show that the ΩXaV motif is required for both nuclear filament formation and degradation of p62. Consistent with the fact that the RVFV can be distinguished from other Bunyaviridae-family viruses due to its ability to form nuclear filaments in infected cells, the motif is absent in the NSs proteins of other Bunyaviridae-family viruses. Taken together, our studies demonstrate that p62 binding to NSs through the ΩXaV motif is essential for degrading p62, forming nuclear filaments and enhancing RVFV virulence. In addition, these results show how the RVFV incorporates a simple motif into the NSs protein that enables it to functionally mimic host cell proteins that bind the p62 subunit of TFIIH. PMID:25918396

  10. High-Throughput Screening Using a Whole-Cell Virus Replication Reporter Gene Assay to Identify Inhibitory Compounds against Rift Valley Fever Virus Infection.

    PubMed

    Islam, Md Koushikul; Baudin, Maria; Eriksson, Jonas; Öberg, Christopher; Habjan, Matthias; Weber, Friedemann; Överby, Anna K; Ahlm, Clas; Evander, Magnus

    2016-04-01

    Rift Valley fever virus (RVFV) is an emerging virus that causes serious illness in humans and livestock. There are no approved vaccines or treatments for humans. The purpose of the study was to identify inhibitory compounds of RVFV infection without any preconceived idea of the mechanism of action. A whole-cell-based high-throughput drug screening assay was developed to screen 28,437 small chemical compounds targeting RVFV infection. To accomplish both speed and robustness, a replication-competent NSs-deleted RVFV expressing a fluorescent reporter gene was developed. Inhibition of fluorescence intensity was quantified by spectrophotometry and related to virus infection in human lung epithelial cells (A549). Cell toxicity was assessed by the Resazurin cell viability assay. After primary screening, 641 compounds were identified that inhibited RVFV infection by ≥80%, with ≥50% cell viability at 50 µM concentration. These compounds were subjected to a second screening regarding dose-response profiles, and 63 compounds with ≥60% inhibition of RVFV infection at 3.12 µM compound concentration and ≥50% cell viability at 25 µM were considered hits. Of these, six compounds with high inhibitory activity were identified. In conclusion, the high-throughput assay could efficiently and safely identify several promising compounds that inhibited RVFV infection. PMID:26762502

  11. Protection against Rift Valley fever virus infection in mice upon administration of interferon-inducing RNA transcripts from the FMDV genome.

    PubMed

    Lorenzo, Gema; Rodríguez-Pulido, Miguel; López-Gil, Elena; Sobrino, Francisco; Borrego, Belén; Sáiz, Margarita; Brun, Alejandro

    2014-09-01

    In this work we have addressed the effect of synthetic, non-infectious, RNA transcripts, mimicking structural domains of the non-coding regions (NCRs) of the foot-and-mouth disease virus (FMDV) genome on the infection of mice with Rift Valley fever virus (RVFV). Groups of 5 mice were inoculated intraperitoneally (i.p.) with 200 μg of synthetic RNA resembling the 5'-terminal S region, the internal ribosome entry site (IRES) or the 3'-NCR of the FMDV genome. RNA inoculation was performed 24h before (-24 h), 24 h after (+24 h) or simultaneously to the challenge with a lethal dose of RVFV. Administration of the IRES RNA afforded higher survival rates than administration of S or 3'NCR transcripts either at -24h or +24h after challenge. In contrast, when RNA inoculation and viral challenge were performed simultaneously, all mice survived in both IRES- and 3'NCR-inoculated groups, with an 80% survival in mice receiving the S RNA. Among survivors, a complete correlation between significant anti-RVFV circulating antibody titers and resistance to a second lethal challenge with the virus was observed, supporting a limited viral replication in the RNA-inoculated animals upon the first challenge. All three RNA transcripts were able to induce the production of systemic antiviral and pro-inflammatory cytokines. These data show that triggering of intracellular pathogen sensing pathways constitutes a promising approach towards development of novel RVF preventive or therapeutic strategies. PMID:24973761

  12. Geochemical trends through time and lateral variability of diatom floras in the Pleistocene Olorgesailie Formation, southern Kenya Rift Valley

    NASA Astrophysics Data System (ADS)

    Owen, R. B.; Renaut, R. W.; Potts, R.; Behrensmeyer, A. K.

    The Olorgesailie Formation (1.2-0.49 Ma) consists of fluvial and lacustrine rift sediments that have yielded abundant Acheulean artifacts and a fossil hominin ( Homo cf. erectus). In testing prior understandings of the paleoenvironmental context, we define nine new geochemical zones. A Chemical Index of Alteration suggests increased catchment weathering during deposition of Members 1, 2, 7, 11, and 13. Biophile elements (Br, S) peak in M8-9 and lower M13 possibly reflecting increased input from soil erosion. REE data show that the Magadi Trachytes supplied most siliciclastic grains. Sixteen diatom stages indicate conductivities of 200-16,000 μS cm - 1 and pH of 7.5-9.5 for five deep-water lakes, ten shallow lakes and sixteen wetlands. These results are compared with diatom data from other sections in the basin and show aquatic spatial variability over km-scale distances. Similar floras are traceable over several kilometers for M2, M3 and M9, indicating broadly homogeneous lacustrine conditions during these times, but diatoms in other members imply variable conditions, some related to local tectonic controls. This lateral and temporal variability emphasizes the importance of carrying out stratigraphic sampling at multiple sites within a basin in efforts to define the environmental context relevant to human evolution.

  13. InSAR and GPS measurements along the Kivu segment of the East African Rift System during the 2011-2012 Nyamulagira volcanic eruption.

    NASA Astrophysics Data System (ADS)

    Nobile, Adriano; Geirsson, Halldor; Smets, Benoît; d'Oreye, Nicolas; Kervyn, François

    2016-04-01

    Along the East African Rift System (EARS), magma intrusions represent a major component in continental rifting. When these intrusions reach the surface, they cause volcanic eruptions. This is the case of the last flank eruption of Nyamulagira, which occurred from November 6 2011 to April 2012. Nyamulagira is an active shield volcano with a central caldera, located in the eastern part of the Democratic Republic of Congo, along the Kivu segment of the East African Rift System. From 1948 to 2012, Nyamulagira mostly showed a particul