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Sample records for agglutination test lat

  1. Latex agglutination test (LAT) for the diagnosis of typhoid fever.

    PubMed

    Sahni, Gopal Shankar

    2013-06-01

    The efficacy of latex agglutination test in the rapid diagnosis of typhoid fever was studied and the result compared with that of blood culture. This study included 80 children suffering from typhoid fever, among which 40 were confirmed by blood culture isolation and 40 had possible typhoid fever based on high Widal's titre (a four-fold rise in the titre of antibody to typhi "O" and "H" antigen was considered as a positive Widal's test result). Eighty children, 40 with febrile illness confirmed to be other than typhoid and 40 normal healthy children were used as negative controls. The various groups were: (i) Study group ie, group I had 40 children confirmed by culture isolation of Salmonella typhi(confirmed typhoid cases). (ii) Control groups ie, (a) group II with 40 febrile controls selected from paediatrics ward where cause other than S typhi has been established, (b) group III with 40 afebrile healthy controls that were siblings of the children admitted in paediatric ward for any reason with no history of fever and TAB vaccination in the last one year, and (c) group IV with 40 children with high Widal's titre in paired sera sample. Widal's test with paired sera with a one week interval between collections were done in all 40 patients. Latex aggtutination test which could detect 900 ng/ml of antigen as observed in checker board titration, was positive in all 40 children from group I who had positive blood culture and in 30 children from group IV who had culture negative and had high Widal's titre positive. Latex agglutination test was positive in 4 children in group II and none in group III. Using blood culture positive cases as true positive and children in groups II and III as true negative, the test had a sensitivity of 100% and specificity of 96%. Latex agglutination test was found to be significantly sensitive (100%) and specific (96%) and could detect 75% more cases in group IV (possible typhoid cases). Thus latex agglutination test can be used for rapid

  2. A rapid latex agglutination test for detection of leptospiral antibodies.

    PubMed

    Ramadass, P; Samuel, B; Nachimuthu, K

    1999-10-01

    A rapid semi-quantitative latex agglutination test (LAT) has been standardized for the detection of leptospiral antibodies in serum samples of man and animals. The efficacy of the LAT was compared with the plate enzyme linked immunosorbent assay (ELISA). A total of 276 human serum samples were analyzed by both LAT and ELISA and percentage positives were 84.8 and 85.9%, respectively. Similarly, of 65 animal samples tested, 63.1 and 69.2% positivity were observed in LAT and ELISA, respectively. Even though the ELISA test was slightly more sensitive than LAT, the rapidity, simplicity and economics of the LAT were found to fulfill the requirements of a screening test for leptospiral antibodies.

  3. Latex agglutination test

    MedlinePlus

    ... the results of this test. Normal Results Normal value ranges may vary slightly among different laboratories. Some labs use different measurements or test different samples. Talk to your provider ...

  4. Stable suspension for Vi-agglutination tests

    PubMed Central

    Ando, Koji; Shimojo, Hiroto

    1953-01-01

    Two methods of preparing a stable suspension for Vi-agglutination tests are discussed. Both maintain Vi-agglutinability and O-inagglutinability after storage at 37°C for 6 months, and the second also maintains the Vi-capsule-staining property. The first method involves the addition of 0.5% CaCl2 to a heavy saline Vi-suspension, while in the second a similar suspension is treated with an 0.2% solution of chrome alum. PMID:20603972

  5. Direct agglutination test for serologic diagnosis of Neospora caninum infection.

    PubMed

    Romand, S; Thulliez, P; Dubey, J P

    1998-01-01

    A direct agglutination test was evaluated for the detection and quantitation of IgG antibodies to Neospora caninum in both experimental and natural infections in various animal species. As compared with results obtained by the indirect fluorescent antibody test, the direct agglutination test appeared reliable for the serologic diagnosis of neosporosis in a variety of animal species. The direct agglutination test should provide easily available and inexpensive tools for serologic testing for antibodies to N. caninum in many host species.

  6. Latex agglutination using the periplasmic proteins antigen of Brucella melitensis is a successful, rapid, and specific serodiagnostic test for ovine brucellosis.

    PubMed

    Ismael, Alaa Bassuny; Swelum, Ayman Abdel-Aziz; Mostafa, Salama A-H; Alhumiany, Abdel-Rahman A

    2016-09-01

    Brucellosis, especially caused by Brucella melitensis, is considered the most-widespread zoonosis in the world, particularly in developing countries. This study was planned to develop an accurate test for diagnosis of ovine brucellosis using a specific hot saline extracted soluble Brucella melitensis periplasmic proteins (SBPPs). The efficacy of the latex agglutination test (LAT) using SBPPs compared to the Rose Bengal test (RBT), buffered plate agglutination test (BPAT), serum agglutination test (SAT), and an indirect enzyme-linked immunosorbent assay (i-ELISA) was evaluated in the field diagnosis of ovine brucellosis. The test performance was evaluated by estimating sensitivity (Se), specificity (Sp), positive predictive value (PPV), negative predictive value (NPV), disease prevalence (DP), positive likelihood ratio (PLR), and negative likelihood ratio (NLR) using test agreement and bacteriological culture in 1777 samples. The false-positive result was significantly (P ⩽0.05) lower in LAT than RBT, BPAT, SAT, and i-ELISA. With reference to test agreement, the Se, Sp, PPV, and PLR were highest (P ⩽0.05) in LAT 99.33%, 99.88%, 98.68%, and 827.25%, respectively. With reference to bacteriological culture, the LAT and i-ELISA tests showed a significant difference in Se with SAT. However, no significant difference in specificity was detected. The DP was 8.44% in the five tests. In conclusion, LAT using SBPPs of B. melitensis could be a suitable serodiagnostic field test for ovine brucellosis, with high sensitivity and specificity.

  7. Improving agglutination tests by working in microfluidic channels.

    PubMed

    Degré, G; Brunet, E; Dodge, A; Tabeling, P

    2005-06-01

    Latex agglutination tests are used for the diagnosis of diseases in man and animals. They are generally simple, cheap, and do not require sophisticated equipment, nor highly specialized skills. In this Technical Note, we put latex agglutination tests in a microfluidic format. The experiment is performed in PDMS (polydimethylsiloxane) microchannels, using streptavidin-coated superparamagnetic beads and a magnetic field. The target molecule is biotinylated protein A. By taking full advantage of the microfluidic conditions (scaling down of the detection volume and controlled action of the shear flow), we achieved an analytical sensitivity of 10 fmol l(-1)(several hundreds of fg ml(-1)) and a fast response (a few minutes) ; the test is also quantitative. Performances of agglutination tests can thus be improved by orders of magnitude by adapting them to a microfluidic format; this comes in addition to the usual advantages offered by this technology (integration, high throughput etc.).

  8. [The pretransfusion bedside agglutination test is not a "Gold Standard"].

    PubMed

    Levy, G

    2008-11-01

    ABO-incompatible transfusions remain frequent in Europe despite the technological progresses in relation with the potential number of human errors during the control procedures of the transfusion chain. The agglutination bedside-test is only one step of this chain and the amelioration of the security will be achieved by its replacement by an electronical check.

  9. Rapid Detection of Contagious Caprine Pleuropneumonia Using a Mycoplasma capricolum subsp. capripneumoniae Capsular Polysaccharide-Specific Antigen Detection Latex Agglutination Test

    PubMed Central

    March, J. B.; Gammack, C.; Nicholas, R.

    2000-01-01

    Latex microspheres (diameter, 8 μm) were coated with anti-Mycoplasma capricolum subsp. capripneumoniae polyclonal immunoglobulin G (IgG) antiserum (anti-F38 biotype). The coated microspheres, when used in a latex agglutination test (LAT), detected M. capricolum subsp. capripneumoniae antigen in the serum of goats with contagious caprine pleuropneumoniae (CCPP). Beads also agglutinated strongly in the presence of purified M. capricolum subsp. capripneumoniae capsular polysaccharide (CPS). Preabsorption of CPS-specific antibodies prior to coating of the beads removed agglutinating activity in the presence of M. capricolum subsp. capripneumoniae, strongly suggesting that CPS is the likely soluble antigen recognized by the test. In addition, the specificity of the LAT exactly mirrored that of an M. capricolum subsp. capripneumoniae CPS-specific monoclonal antibody (WM25): of the 8 other mycoplasma species tested, agglutination was observed only with bovine serogroup 7. The LAT detected all 11 strains of M. capricolum subsp. capripneumoniae examined in this study, with a sensitivity level of 2 ng of CPS, or the equivalent of 1.7 × 104 CFU, in a reaction volume of 0.03 ml of serum. With field sera from goats with CCPP, the results of the LAT exhibited a 67% correlation with the results of the currently used complement fixation test (CFT), with the main discrepancy in diagnosis resulting from the increased sensitivity of the LAT compared to that of CFT. This antigen-detection LAT should prove particularly useful in identifying animals in the earliest stages of CCPP and combines sensitivity and low cost with ease of application in the field, without the need for any specialist training or equipment. PMID:11060083

  10. Macroscopic Agglutination Test for Rapid Diagnosis of Human Leptospirosis

    PubMed Central

    Brandão, Angela P.; Camargo, Eide D.; da Silva, Emilson D.; Silva, Marcos V.; Abrão, Rui V.

    1998-01-01

    A commercially available slide agglutination test (SAT) for the diagnosis of human leptospirosis was evaluated by comparing it to an immunoglobulin M (IgM) enzyme-linked immunosorbent assay (ELISA) and to the microscopic agglutination test (MAT). For all 108 patients, leptospirosis was diagnosed on the basis of a fourfold or greater increase in titer by MAT (seroconversion), and all but 1 of 245 controls were MAT negative (titers, <1:100). Both SAT and the IgM ELISA failed to detect one case of infection (sensitivity, 99%). Only 3 of 145 blood donors and none of the 100 patients with other illnesses were SAT positive (specificity, 99%). The overall results were similar for the three tests; however, SAT and ELISA were statistically more sensitive as initial screening tests. For 22% of the patients, the diagnosis of leptospirosis was made earlier by SAT than by MAT. SAT detected 27 (44%) of 62 MAT-negative patients with the first serum sample. ELISA and SAT had very similar results. Follow-up of patients for 1 year after the onset of symptoms showed a decreasing rate of positivity by SAT from the third month on. The rate of positivity by ELISA decreased more slowly, to about 67% by the end of the study. By MAT all patients were persistently reactive. SAT and ELISA seem to be convenient methods for the rapid and early screening for leptospirosis and could replace the less sensitive MAT. ELISA gives less subjective results than SAT and provides information on IgM kinetics, but it can be performed only by the more sophisticated laboratories. SAT is inexpensive, can be performed more quickly and more easily than ELISA, and could be used by the less well equipped laboratories. PMID:9774553

  11. 9 CFR 147.1 - The standard tube agglutination test. 1

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 9 Animals and Animal Products 1 2014-01-01 2014-01-01 false The standard tube agglutination test... Blood Testing Procedures § 147.1 The standard tube agglutination test. 1 1 The procedure described is a... containers provided by the laboratory. The containers should be stout-walled test tubes, preferably 3/8 by...

  12. 9 CFR 147.1 - The standard tube agglutination test. 1

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false The standard tube agglutination test... Blood Testing Procedures § 147.1 The standard tube agglutination test. 1 1 The procedure described is a... containers provided by the laboratory. The containers should be stout-walled test tubes, preferably 3/8 by...

  13. 9 CFR 147.1 - The standard tube agglutination test. 1

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 9 Animals and Animal Products 1 2011-01-01 2011-01-01 false The standard tube agglutination test... Blood Testing Procedures § 147.1 The standard tube agglutination test. 1 1 The procedure described is a... containers provided by the laboratory. The containers should be stout-walled test tubes, preferably 3/8 by...

  14. Latex agglutination: diagnose the early cryptococcus neoformans test of capsular polysaccharide antigen.

    PubMed

    Wang, Huanrong; Yuan, Xueqian; Zhang, Lifeng

    2015-01-01

    This paper aims to discuss the early diagnosis value of latex agglutination test in Cryptococcal meningitis. The cerebrospinal fluid (CSF) of 112 patients with definite Cryptococcal meningitis and 26 patients with tubercular meningitis and virus meningitis were collected, latex agglutination test is adopted to detect Cryptococcal capsular polysaccharide antigen. Then it was compared with fungal culture and direct microscopy method for evaluating the sensitivity and specificity of the diagnosis. The sensitivity of three methods including latex agglutination test, fungal culture and direct microscopy was 91.1%,69.6% and 73.2% respectively. The specificity of latex agglutination test was 96.0%, 100% and 100% respectively. That latex agglutination test to detect Cryptococcal capsular polysaccharide antigen could be taken as the early diagnostic method of Cryptococcus neoformans meningitis.

  15. Environmental Tests of the Flight GLAST LAT Tracker Towers

    SciTech Connect

    Bagagli, R.; Baldini, L.; Bellazzini, R.; Barbiellini, G.; Belli, F.; Borden, T.; Brez, A.; Brigida, M.; Caliandro, G.A.; Cecchi, C.; Cohen-Tanugi, J.; Angelis, A.De; Drell, P.; Favuzzi, C.; Fusco, P.; Gargano, F.; Germani, S.; Giglietto, N.; Giordano, F.; Goodman, J.; Himel, T.

    2008-03-12

    The Gamma-ray Large Area Space telescope (GLAST) is a gamma-ray satellite scheduled for launch in 2008. Before the assembly of the Tracker subsystem of the Large Area Telescope (LAT) science instrument of GLAST, every component (tray) and module (tower) has been subjected to extensive ground testing required to ensure successful launch and on-orbit operation. This paper describes the sequence and results of the environmental tests performed on an engineering model and all the flight hardware of the GLAST LAT Tracker. Environmental tests include vibration testing, thermal cycles and thermal-vacuum cycles of every tray and tower as well as the verification of their electrical performance.

  16. Development and assessment of a latex agglutination test based on recombinant MSP5 to detect antibodies against Anaplasma marginale in cattle

    PubMed Central

    Ramos, Carlos A.N.; Araújo, Flábio R.; Santos, Rafaelle C.; Melo, Elaine S.P.; Sousa, Letícia C.; Vidal, Carlos E.S.; Guerra, Neurisvan R.; Ramos, Rafael A.N.

    2014-01-01

    The recombinant protein MSP5 has been established as an important antigen for serological diagnosis of Anaplasma marginale by enzyme-linked immunosorbent assay (ELISA). However, due to the high cost of specialized equipment, this technique is not accessible to all laboratories, especially in developing countries in areas where the disease is endemic. The present study describes the standardization of a latex agglutination test (LAT) to detect antibodies against A. marginale based on recombinant MSP5. Compared with indirect enzyme-linked immunosorbent assay (iELISA), the relative sensitivity and specificity of the LAT were 95.21% and 91.86% respectively, with an almost perfect agreement between tests (kappa index = 0.863). These results can be considered important for the serological diagnosis of A. marginale, as they indicate that the test represents a rapid and low cost alternative to ELISA. PMID:24948931

  17. Development and assessment of a latex agglutination test based on recombinant MSP5 to detect antibodies against Anaplasma marginale in cattle.

    PubMed

    Ramos, Carlos A N; Araújo, Flábio R; Santos, Rafaelle C; Melo, Elaine S P; Sousa, Letícia C; Vidal, Carlos E S; Guerra, Neurisvan R; Ramos, Rafael A N

    2014-01-01

    The recombinant protein MSP5 has been established as an important antigen for serological diagnosis of Anaplasma marginale by enzyme-linked immunosorbent assay (ELISA). However, due to the high cost of specialized equipment, this technique is not accessible to all laboratories, especially in developing countries in areas where the disease is endemic. The present study describes the standardization of a latex agglutination test (LAT) to detect antibodies against A. marginale based on recombinant MSP5. Compared with indirect enzyme-linked immunosorbent assay (iELISA), the relative sensitivity and specificity of the LAT were 95.21% and 91.86% respectively, with an almost perfect agreement between tests (kappa index = 0.863). These results can be considered important for the serological diagnosis of A. marginale, as they indicate that the test represents a rapid and low cost alternative to ELISA.

  18. Serogrouping of Bacteroides fragilis subsp. fragilis by the agglutination test.

    PubMed Central

    Lambe, D W; Moroz, D A

    1976-01-01

    The agglutination technique was used to establish a serological classification scheme for 98 strains of Bacteroides fragilis subsp. fragilis isolated from clinical specimens and normal human feces. Absorbed antisera were prepared to seven strains of B. fragilis subsp. fragilis. These seven absorbed antisera were species as well as subspecies specific and provided the basis of the serological classification scheme. This scheme was composed of 21 serogroups; seven of these serogroups contained only one group component. There was a total of 45 serological patterns. This serological scheme may be used for the serological classification of strains of B. fragilis subsp. fragilis and to study the epidemiology of this organism. PMID:950378

  19. Evaluation of the one-point microcapsule agglutination test for diagnosis of leptospirosis.

    PubMed Central

    Arimitsu, Y.; Kmety, E.; Ananyina, Y.; Baranton, G.; Ferguson, I. R.; Smythe, L.; Terpstra, W. J.

    1994-01-01

    We have developed a one-point microcapsule agglutination test (MCAT) for the serodiagnosis of leptospirosis. The MCAT kit was evaluated for use in humans by six WHO Collaborating Centres for Reference and Research on Leptospirosis. The laboratories classified their serum samples on the basis of the microscopic agglutination test (MAT) and the following screening tests: enzyme-linked immunosorbent assay (ELISA), macroscopic (slide) agglutination test, or the complement fixation test. The MCAT may in some instances give a positive result earlier in the course of the disease than MAT or the ELISA IgM; on the other hand, it did not detect antibodies against some serovars, for example, those of the Sejroe or Australis serogroup in Slovakia. In contrast, however, the MCAT detected antibodies to serovar hardjo (the same serogroup as Sejroe) in patients from the United Kingdom and the Russian Federation. PMID:8062397

  20. Human African trypanosomiasis: a latex agglutination field test for quantifying IgM in cerebrospinal fluid.

    PubMed Central

    Lejon, V.; Büscher, P.; Sema, N. H.; Magnus, E.; Van Meirvenne, N.

    1998-01-01

    LATEX/IgM, a rapid agglutination test for the semi-quantitative detection of IgM in cerebrospinal fluid of patients with African trypanosomiasis, is described in this article. The lyophilized reagent has been designed for field use and remains stable at 45 degrees C for one year. The test has been evaluated on cerebrospinal fluid samples from trypanosome-infected and non-infected patients, by comparison with commercial latex agglutination, radial immunodiffusion, and nephelometry. All test systems yielded similar results. PMID:10191550

  1. Cross-reactivity in Cryptococcus antigen latex agglutination test in two commercial kits.

    PubMed

    Tone, Kazuya; Umeda, Yoshiko; Makimura, Koichi

    2016-05-01

    This article presents an examination of the cross-reactivity of pathogenic fungi with Cryptococcus neoformans in two commercial Cryptococcus antigen latex agglutination tests performed across 39 fungal strains. Some fungi were newly indicated as Cryptococcus cross-reactive, and the two kits showed differences in cross-reactive fungi.

  2. Characterization of two different agglutinators in the latex fixation test, occurring in normal human sera

    PubMed Central

    Klein, F.; Valkenburg, H. A.; Van Zwet, Theda L.; Lafeber, Geertruida J. M.

    1966-01-01

    Using a sensitive modification of the latex fixation test it is possible to detect a small agglutinating effect in about 60 per cent of normal human sera, after these have been heated for 30 minutes at 56°. This was shown to be caused by an IgM globulin with the properties of a rheumatoid factor. The factor is able to react with human IgG globulin and may represent an antibody to the IgG part of circulating antigen—antibody complexes. The heat treatment probably inactivates an inhibitor of the latex fixation reaction. In addition all normal human sera give an agglutination reaction with IgG coated latex at incubation temperatures of 37° or lower. It was shown that these reactions are caused by a thermolabile, non-reducible component with a sedimentation constant of about 10. This component is probably identical with the complement component C'1q. The agglutinating activity was found in the α2—β1 region after electrophoresis of untreated serum, but in the slow γ region after treatment of the serum with EDTA. This kind of agglutination may cause false positive reactions in latex tests which are carried out at 37° or less. ImagesFIG. 1FIG. 3 PMID:4160336

  3. Rapid detection of methicillin-resistant Staphylococcus aureus strains not identified by slide agglutination tests.

    PubMed Central

    Kuusela, P; Hildén, P; Savolainen, K; Vuento, M; Lyytikäinen, O; Vuopio-Varkila, J

    1994-01-01

    Seventy-nine methicillin-resistant Staphylococcus aureus (MRSA) strains, isolated during 1980 to 1990, were classified as MRSA Aggl- (14 strains) and MRSA Aggl+ (65 strains) strains on the basis of test results in slide agglutination assays designed to detect fibrinogen-binding protein (clumping factor) and protein A on the staphylococcal surface. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis analysis revealed that lysostaphin digests of MRSA Aggl- strains contained a high-molecular-weight protein which was not detected in digests of MRSA Aggl+ strains. Immunization of rabbits with an MRSA Aggl- strain produced an antiserum which agglutinated all MRSA Aggl- strains and also 64 of 65 MRSA Aggl+ strains. Only 1 of 68 coagulase-negative staphylococci showed agglutination in this assay. The anti-MRSA Aggl- antiserum reacted mainly with a 230-kDa staphylococcal surface protein but also with a 175-kDa protein, probably formed by proteolysis of the former and a few slightly smaller proteins. These could not be immunologically detected in lysostaphin digests of MRSA Aggl+ strains. Purified antibodies reacting with the 230-kDa protein agglutinated all MRSA Aggl- strains, indicating that the protein is located on the surfaces of staphylococci. The results suggest a tentative role for the 230-kDa protein or its fragments as a novel target to develop more efficient rapid identification methods for S. aureus, including MRSA. Images PMID:8126170

  4. Commercial latex agglutination test for rapid diagnosis of group B streptococcal infection in infants.

    PubMed Central

    Webb, B J; Baker, C J

    1980-01-01

    Although latex agglutination assays for detection of a variety of bacterial antigens in body fluids from patients with systemic infection have been shown to be useful as rapid diagnostic techniques, lack of commercial availability has restricted their application. The Streptex latex test kit for the detection of group B streptococcal (GBS) antigen in admission body fluid specimens was evaluated for sensitivity and specificity in 54 infants with meningitis and in 10 infants with normal cerebrospinal fluid (CSF) parameters. GBS antigen was detected in 22 of 28 (78.6%) CSF specimens by latex agglutination and in 23 of 28 (82.1%) by countercurrent immunoelectrophoresis. Antigen was present in 21 of 28 (latex agglutination) and 19 of 26 (countercurrent immunoelectrophoresis) CSF specimens after the initiation of antimicrobial therapy. Heat-labile factors accounted for nonspecific agglutination reactions with latex suspensions other than group B in 3 of 28 CSF samples from patients with GBS meningitis. These nonspecific reactions were readily eliminated by heating specimens for 10 min at 100 degrees C. Fifteen patients with GBS meningitis had admission serum and urine samples collected in addition to CSF. Antigen was detected by latex agglutination and countercurrent immunoelelectrophoresis in 14 of 15 (93.3%) and 13 of 15 (86.7%) concentrated urine specimens, respectively, and in 12 of 15 (80%) CSF specimens and 4 of 15 (27%) sera by each method. These findings indicate that the Streptex latex test is a rapid, sensitive, and readily available method for detection of GBS antigen in admission body fluid specimens from infants with meningitis. PMID:7012177

  5. Comparison of genomic and antimicrobial resistance features of latex agglutination test-positive and latex agglutination test-negative Staphylococcus aureus isolates causing bovine mastitis.

    PubMed

    Moser, A; Stephan, R; Corti, S; Johler, S

    2013-01-01

    The dairy industry suffers massive economic losses due to staphylococcal mastitis in cattle. The Staphaureux latex agglutination test (Oxoid, Basel, Switzerland) was reported to lead to negative results in 54% of bovine Staphylococcus aureus strains, and latex-negative strains are thought to be less virulent than Staphaurex latex-positive strains. However, comparative information on virulence and resistance profiles of these 2 groups of Staph. aureus is scarce. Our objective was to associate the latex agglutination phenotype of Staph. aureus strains isolated from bovine mastitis milk with data on clonal complexes, virulence genes, and antibiotic resistance to (1) determine the virulence profiles of the Staphaureux test positive and Staphaurex test negative groups, and (2) provide data needed to improve treatment of bovine mastitis and to identify potential vaccine targets. Seventy-eight Staph. aureus strains isolated from 78 cows on 57 Swiss farms were characterized. Latex agglutination was tested by Staphaureux kit, and resistance profiles were generated by disk diffusion. A DNA microarray was used to assign clonal complexes (CC) and to determine virulence and resistance gene profiles. By the Staphaureux test, 49% of the isolates were latex-positive and 51% were latex-negative. All latex-negative strains were assigned to CC151, whereas latex-positive strains were assigned to various clonal complexes, including CC97 (n=16), CC8 (n=10), CC479 (n=5), CC20 (n=4), CC7 (n=1), CC9 (n=1), and CC45 (n=1). Although the latex-negative isolates were susceptible to all antimicrobial agents tested, 24% of latex-positive isolates were classified as intermediate with regard to cefalexin-kanamycin and 13% were resistant to both ampicillin and penicillin. Microarray profiles of latex-negative isolates were highly similar, but differed largely from those of latex-positive isolates. Although the latex-negative group lacked several enterotoxin genes and sak, it exhibited significantly

  6. Elemental X-ray mapping of agglutinated foraminifer tests: a non- destructive technique for determining compositional characteristics.

    USGS Publications Warehouse

    Commeau, R.F.; Reynolds, Leslie A.; Poag, C.W.

    1985-01-01

    The composition of agglutinated foraminiferal tests vary remarkably in response to local substrate characteristics, physiochemical properties of the water column and species- dependant selectivity of test components. We have employed a technique that combines a scanning electron microscope with an energy dispersive X-ray spectrometer system to identify major and minor elemental constituents of agglutinated foraminiferal walls. As a sample is bombarded with a beam of high energy electrons, X-rays are generated that are characteristic of the elements present. As a result, X- ray density maps can be produced for each of several elements present in the tests of agglutinated foraminifers. -Authors

  7. [Evaluation of the usefulness of the agglutination test with Mangifera indica extract for the identification of pathogenic Yersinia enterocolitica strains].

    PubMed

    Kałuzewski, S; Gierczyński, R; Szych, J; Jagielski, M

    1997-01-01

    The study was performed on 137 Y. enterocolitica strains belonging to various serological groups, including 75 03 group strains isolated form human clinical material. The agglutination test on slides was carried out on this strains using Mangifera indica extract of own production. Agglutinating preparation obtained from the seeds of M. indica agglutinated Y. enterocolitica organisms possessing the pVY plasmid and CRMOX+ phenotype in dilutions to 1.56 micrograms/ml. In identification tests conducted parallelly agglutination solution was used in concentrations of 100 and 10 micrograms/ml. All clones of Y. enterocolitica from O3 group from cultures at 37 degrees C and with CRMOX+ phenotype possessing the pVY plasmid were agglutinated by the extract. Agglutination failed to develop in the cultures of these clones incubated at 25 degrees C. Yersinia clones not containing the pVY plasmid with CRMOX- phenotype were resistant to agglutination. The virulence plasmid was found in 44 out of 75 strains of Y. enterocolitica O3 and was identified by restriction analysis after plasmid DNA digestion with Eco RI enzyme. The obtained results agreed with those of Wauters et al. in 1995 and confirmed the opinion of these authors on the usefulness of the test with M. indica agglutinin for the identification of virulent Y. enterocolitica strains.

  8. Comparison of PCR, Wright agglutination test and blood culture for diagnosis of brucellosis in suspected patients.

    PubMed

    Hekmatimoghaddam, Seyedhosssein; Sadeh, Maryam; Khalili, Mohammad Bagher; Mollaabedin, Mansour; Sazmand, Alireza

    2013-11-15

    Brucellosis has long been prevalent in Iran, with considerable medical and economic importance. Timely diagnosis is needed for early management and effective prevention of its consequences in human beings and animals. Current diagnostic methods impose peculiar challenges in terms of analytical method performance. This study compares diagnostic sensitivity, specificity, predictive Value of Positive (PVP) and Predictive Value of Negative (PVN) for Polymerase Chain Reaction (PCR), Wright agglutination test and blood culture used for patients suspected of brucellosis. In 120 patients clinically suspected of brucellosis and referred by physicians to the Yazd central Medical Laboratory, some relevant demographic, occupational, nutritional and clinical data were collected. Also, venous blood samples were drawn for diagnosis of brucellosis using PCR, Wright agglutination test and blood culture techniques. The most frequent symptom of patients was arthralgia (82 cases, 68.3%). PCR was positive in 25 cases (20.8%), wright test in 21 patients (17.5%) and blood culture in 6 cases (5%). In 20 out of 21 wright-positive cases, PCR was positive and all of the culture-positive patients had positive PCR. Sensitivity, specificity, PVP and PVN of blood culture compared to PCR (as the gold standard test) were 24, 100, 100 and 86%, respectively, but the above parameters when PCR is compared with blood culture (as gold standard) were 100, 83, 24 and 95%, respectively. PCR has better analytical performances than blood culture for diagnosis of brucellosis and is suitable for confirmation of Wright-positive cases.

  9. Latex agglutination test for detecting feline panleukopenia virus, canine parvovirus, and parvoviruses of fur animals.

    PubMed Central

    Veijalainen, P M; Neuvonen, E; Niskanen, A; Juokslahti, T

    1986-01-01

    A latex agglutination (LA) test for the detection of parvoviruses of fur animals, cats, and dogs was developed, and its sensitivity and specificity were compared with those of hemagglutination (HA) and the enzyme-linked immunosorbent assay (ELISA). Tissue culture isolation was used to confirm the specificity results. Fecal samples from various sources were tested, including specimens from raccoon dogs and mink which were experimentally infected with parvoviruses by oral exposure. LA compared favorably with the other tests. The ELISA was the most sensitive. When it was considered as a reference test, the corresponding sensitivities for HA and LA were 96 and 91%, respectively. The specificities were 93% for the ELISA, 95% for the HA test, and 92% for the LA test. LA seems to be a suitable technique for screening animals in the field and in laboratories in which sophisticated techniques are not available. PMID:3007568

  10. Evaluation of a commercial latex agglutination test for rapid detection of Salmonella in fecal samples.

    PubMed

    Bänffer, J R; van Zwol-Saarloos, J A; Broere, L J

    1993-08-01

    A latex agglutination test for the detection of salmonella in feces was evaluated in comparison to direct culture and enriched culture using both artificially inoculated samples and clinical samples. In the samples inoculated artificially with different concentrations of salmonella (10(1) to 10(5) per gram) the enriched culture performed better only at the 10(2) level in 0.4 g samples, whereas the latex test performed as well as the enriched culture at all levels in 4 g samples. In the tests using clinical samples, there was no significant difference between results of the latex test performed in 2283 samples and the enriched culture performed in 2072 samples. The sensitivity, specificity and negative and positive predictive values of the latex test were 88.2%, 98%, 97.5% and 63% respectively. The test provided results rapidly but yielded a number of false positive results.

  11. Case report: false negative serum cryptococcal latex agglutination test in a patient with disseminated cryptococcal disease.

    PubMed

    Navabi, Nazlee; Montebatsi, Milton; Scott, Michelle; Gluckman, Stephen J; Reid, Michael J A

    2015-01-01

    A case of false-negative serum latex agglutination cryptococcal antigen (CRAG) test in a 45-year-old HIV-positive male with Cryptococcus-positive culture is described. The patient was presented to a hospital in Botswana, with breathlessness and a diffuse papular rash. His CD4 count was 25 cells/μL. Despite the suspicion for disseminated cryptococcal disease, an initial serum CRAG latex test was negative. Results of subsequent Indian ink staining, culture of cerebrospinal fluid and skin scrapings, and serum lateral flow immunoassay (LFA) were all positive for Cryptococcus neoformans. There are several possible explanations for the false-negative CRAG latex test. Given the positive LFA result, we speculate that disease may have been caused by Cryptococcus gattii, which is estimated to be responsible for between 15% and 30% of all cryptococcal diseases in Botswana. Reduced sensitivity of CRAG latex assays for detecting C gattii may lead to underdiagnosis of cryptococcal infection.

  12. Preliminary observations on the use of latex agglutination test for the detection of mastitis due to Streptococcus agalactiae in cows.

    PubMed Central

    Daniel, R C; Barnum, D A

    1986-01-01

    A commercial latex agglutination test for the detection of Group B streptococcal antigens was used to detect infection due to Streptococcus agalactiae in whey of bovine milk samples. Fifteen out of 17 known infections were detected, but it was necessary to incubate the wheys at 37 degrees C for 18 hours in nine of the samples. It was found that the latex agglutination test could detect Group streptococcal carbohydrate antigens in whey samples from artificially infected quarters from one to four days after failure to detect the organism on culture or after antibiotic therapy of the affected quarter. PMID:3527389

  13. Blood stained cerebrospinal fluid responsible for false positive reactions of latex particle agglutination tests.

    PubMed Central

    Camargos, P A; Almeida, M S; Filho, G L; Batista, K W; Carvalho, A G; Pereira, C L

    1994-01-01

    The accuracy of the latex particle agglutination test (LPAT) was assessed in blood stained cerebrospinal fluid (CSF) specimens from 166 paediatric patients, aged from three months to 13 years. A commercial LPAT kit was used to detect Haemophilus influenzae type b, Streptococcus pneumoniae, and Neisseria meningitidis A, B, and C soluble antigens. Culture of CSF specimens was used as the standard and all laboratory procedures were performed blind. The mean CSF erythrocyte count was 66,406 cells/mm3 in the cases and 11,560 cells/mm3 in the controls. The sensitivity and the specificity of LPAT were 83.8 and 94.0%, respectively, suggesting that LPAT is a useful diagnostic tool even in blood stained CSF specimens. PMID:7876387

  14. The relationship of the lunar regolith less than 10-microns fraction and agglutinates. II - Chemical composition of agglutinate glass as a test of the 'fusion of the finest fraction' /F3/ model

    NASA Technical Reports Server (NTRS)

    Walker, R. J.; Papike, J. J.

    1982-01-01

    Agglutinate glasses from nine Apollo soils have been studied using an automated electron microprobe technique in order to test the fusion of the finest fraction model proposed by Papike (1981). The nine average agglutinate glass compositions are compared with the calculated fused-soil-free compositions, the bulk compositions and the 90-20 micron fraction compositions of the soils in which they are found. It is found that the agglutinate glass data are consistent with the composition of most of the fractions finer than 10 microns, allowing for the volatile loss of K2O and Na2O; some inconsistencies that do arise may result from the degree of soil maturity and the amount of material finer than 10 microns. It is concluded that the fusion of the finest fraction model is a good first approximation of mechanisms affecting the formation of agglutinate glass.

  15. Evaluation of Pyloriset Dry, a new rapid agglutination test for Helicobacter pylori antibody detection.

    PubMed Central

    Lozniewski, A; De Korwin, J D; Conroy, M C; Plenat, F; Weber, M

    1996-01-01

    We evaluated the performance of a new latex agglutination test, Pyloriset Dry (Orion Diagnostica, Espoo, Finland), in the simultaneous detection of immunoglobulin G (IgG), IgA, and IgM antibodies to Helicobacter pylori and compared it with that of the Pyloristat test (BioWhittaker, Fontenay-sous-Bois, France), an enzyme-linked immunosorbent assay detecting IgG to H. pylori, for 96 untreated dyspeptic patients who had undergone gastroduodenal endoscopy. Infection was diagnosed in 56 cases by positive culture and/or positive Giemsa stain and rapid urease test (antral biopsies) and was associated with chronic gastritis in 52 patients. Forty noninfected patients did not have chronic gastritis. The sensitivity of Pyloriset Dry was 91.1%. The sensitivity of Pyloristat was 91.1 or 82.1%, depending on whether equivocal results were considered positive or negative, respectively. Both tests had a specificity of 87.5%. Their performances were not statistically different. Thus, Pyloriset Dry is an alternative to serological tests for adults, particularly when a small number of serum samples has to be tested. PMID:8784587

  16. Rapid latex particle agglutination test for Escherichia coli strains of porcine origin producing heat-labile enterotoxin.

    PubMed Central

    Finkelstein, R A; Yang, Z S; Moseley, S L; Moon, H W

    1983-01-01

    A latex particle agglutination test previously shown to be suitable for the rapid identification of Escherichia coli strains of human origin producing heat-labile enterotoxin (R. A. Finkelstein and Z. Yang, J. Clin. Microbiol. 18:23-28) is equally applicable to strains of porcine origin. PMID:6361056

  17. The latex agglutination test versus counterimmunoelectrophoresis for rapid diagnosis of bacterial meningitis

    PubMed Central

    Bortolussi, Robert; Wort, Arthur J.; Casey, Stephanie

    1982-01-01

    A modified latex agglutination (LA) test was compared with Gram-staining and counterimmunoelectrophoresis (CIE) for the rapid detection in the cerebrospinal fluid (CSF) of antigen to Haemophilus influenzae type b, Neisseria meningitidis groups A, B and C, Escherichia coli K1, Streptococcus pneumoniae and group B streptococci, seven frequent causes of bacterial meningitis in children. Of 50 CSF samples from patients with culture-proven bacterial meningitis 90% were correctly shown by the LA test to contain antigen of the responsible organism. Gram-staining revealed organisms in 80% of 45 of these samples. In 75% of the 40 samples that were of sufficient volume for CIE, positive results for the appropriate antigen were obtained. The concentration of antigen detected in the CSF by the LA test varied from undetectable to 800 000 ng/ml. Patients with a high concentration (more than 2000 ng/ml or a positive result at dilutions of CSF over 1/8) were significantly more likely to have a poor response to therapy (two died and two had persistent pleocytosis or bacteria in the CSF) than patients with a lower concentration (4/16 v. 0/18, P < 0.05). After appropriate therapy was begun the concentration of antigen fell dramatically, but measurable amounts of antigen persisted in the CSF for up to 6 days. The LA test detected bacterial antigen at concentrations 2 to 70 times below the lower limit detected by CIE. In seven additional patients who had received antibiotics before lumbar puncture was performed the LA test detected antigen from meningitis-causing bacteria even though cultures of the CSF were sterile. In another 145 patients who did not have meningitis the results of the LA test were negative. The LA test, done as described in this article, is easier to perform than CIE and should be a useful addition to the diagnostic tests carried out on the CSF of any patient suspected of having meningitis. PMID:6749272

  18. A systematic review on the microscopic agglutination test seroepidemiology of bovine leptospirosis in Latin America.

    PubMed

    Pinto, Priscila da Silva; Libonati, Hugo; Penna, Bruno; Lilenbaum, Walter

    2016-02-01

    The diagnosis of leptospirosis commonly relies on serology, which has three issues that are referred: the sampling, the antigen panel, and the cutoff point. We propose a systematic review of the bovine leptospirosis in Latin America, in order to provide a better understanding of the evolution of the research and of the seroepidemiology of bovine leptospirosis in that region. Internet databases were consulted over the year of 2014. Inclusion criteria for analysis included serosurvey using microscopic agglutination test (MAT), a relevant number of animals, the presence in the antigen panel of at least one representant of serogroup Sejroe, and a cutoff point of ≥100. A total of 242 articles that referred to cattle, leptospir*, and one region of Latin America was found. Only 105 articles regarding to serosurveys using MAT were found in several countries, and 61 (58.1 %) met all the inclusion criteria. In conclusion, this systematic review demonstrated a high prevalence of the infection (75.0 % at herd level and 44.2 % at animal level), with predominance of strains of serogroup Sejroe (80.3 %). It was evident that there is the necessity of more studies in several countries, as well as the need for greater standardization in studies, especially with regard to the adopted cutoff point at serological tests.

  19. Validation studies of the latex agglutination test for the detection of Trichinella larvae in meat products.

    PubMed

    Gayda, Jennifer; Reckinger, Sabine; Thaben, Nora; Nöckler, Karsten; Mayer-Scholl, Anne

    2016-11-15

    Human trichinellosis is a foodborne disease caused by ingestion of meat infected with Trichinella muscle larvae. To control Trichinella spp. infection in the European Union, all slaughtered pigs from holdings that are not officially recognized as applying controlled housing conditions and other animals susceptible to Trichinella infection and intended for human consumption should be examined by one of the approved digestion methods described in Regulation (EU) No. 2015/1375. In the past, Trichinella outbreaks due to the consumption of cured wild boar or pork products have been described in several European countries, making the identification of the larvae from these products relevant for Trichinella control. Therefore, this study aimed to validate the newly approved latex agglutination test (Trichin-L) for routine testing of cured meat products. The test was validated based on the OIE Guidelines using pork products spiked with Trichinella larvae. The sensitivity of the method varied greatly depending on the investigated meat product and was usually lower than for the gold standard, the magnetic stirrer method. The detection rate reached 80% for three larvae and 60% for one larva in cured pork sausages. A detection rate of 100% for three larvae and 50% for one larva was found in bacon. For frozen samples (-20°C) the Trichin-L kit is similarly sensitive as for cured samples. Further, to determine the performance of the test under field conditions, pork products from regions with known high Trichinella prevalences confiscated by customs authorities at two German international airports were analyzed. Problems associated with the Trichin-L test were incomplete digestion due to fatty ingredients, spices and very dry meat products, resulting in data which could not be evaluated. Therefore, the test is currently not suitable for the detection of Trichinella larvae in cured meat products and needs further adaptation steps to increase both usability and sensitivity.

  20. Quantitative capillary reversed passive latex agglutination test for C-reactive protein (CRP) in the dog.

    PubMed

    Tagata, K; Yokoyama, S; Ginbo, T; Honda, M; Okimura, T; Odakura, M; Nomura, M; Yamamoto, S

    1996-01-01

    A capillary reversed passive latex agglutination test (capillary RPLA) was developed which allows quantification of serum C-reactive protein (CRP) within approximately 15 min. The logarithmic regression line (calibration curve) obtained after measuring each CRP concentration three times in twofold dilutions of a standard canine serum containing 222 micrograms/ml of CRP was y = 6.394 + 0.030x (r = 0.995). Capillary RPLA permitted quantification of CRP in the range 6.9-222 micrograms/ml. The coefficients of variation ranged from 10.28% to 12.40%. The recovery rates (percentage recovery) of CRP by capillary RPLA were within the range 87% to 106%. On measuring the CRP concentrations in sera from 78 dogs by capillary RPLA, single radial immunodiffusion (SRID) and enzyme-linked immunosorbent assay (ELISA), close correlations were demonstrated between SRID and capillary RPLA (y = 7.250 + 1.109x, r = 0.978), between SRID and ELISA (y = 3.042 + 1.059x, r = 0.967), and between capillary RPLA and ELISA (y = 1.778 + 0.929x, r = 0.962). Capillary RPLA may be considered useful as a routine biochemical technique for measurement of serum CRP concentration in the dog.

  1. Usefulness of PCR and Antigen Latex Agglutination Test with Samples Obtained by Transthoracic Needle Aspiration for Diagnosis of Pneumococcal Pneumonia

    PubMed Central

    García, Amparo; Rosón, Beatriz; Pérez, José Luis; Verdaguer, Ricard; Dorca, Jordi; Carratalà, Jordi; Casanova, Aurora; Manresa, Frederic; Gudiol, Francesc

    1999-01-01

    In a large number of cases, the etiology of community-acquired pneumonia (CAP) is not established. Some cases are probably caused by Streptococcus pneumoniae. Transthoracic needle aspiration (TNA) culture has a limited sensitivity which might be improved by antigen detection or gene amplification techniques. We evaluated the capacity of a PCR assay and a latex agglutination test to detect S. pneumoniae in samples obtained by TNA from 95 patients with moderate-to-severe CAP. Latex agglutination and PCR had sensitivities of 52.2 and 91.3%, specificities of 88.7 and 83.3%, positive predictive values of 62.3 and 65.6%, and negative predictive values of 83.3 and 96.5%, respectively, when culture techniques were used as the “gold standard.” When we considered expanded criteria for the diagnosis of pneumococcal pneumonia as a standard for our calculations, latex agglutination and PCR had sensitivities of 53.6 and 89.7%, specificities of 93.0 and 90.0%, positive predictive values of 78.9 and 81.3%, and negative predictive values of 80.3 and 94.7%, respectively. The additional diagnosis provided by the PCR assay compared to latex agglutination was 12.2% (95% confidence interval of the difference from 0.4 to 20.1%). PCR was more sensitive than TNA culture, particularly in patients who had received prior antibiotic therapy (83.3 versus 33.3%). Although PCR is a very sensitive and specific technique, it has not proved to be cost-effective in clinical practice. Conversely, latex agglutination is a fast and simple method whose results might have significant implications for initial antibiotic therapy. PMID:9986837

  2. [Relationship between the sensitivity of the delayed agglutination test and synthetic detergents].

    PubMed

    Iovchev, E; Vodas, K

    1977-01-01

    Residual amounts of detergents (Losk, Bio-73, Alka-lux, Bourgas, Bourgaslux, and Vero) in a concentration of 10-5 to 10-7 in physiologic saline can inhibit the agglutination titers by 3 to 5 degrees. This could mislead in the assessment of the reaction with regard to its diagnostic value. It is admitted that the inhibition produced is due to changes in the antibodies--drop in the total protein and light variations in all protein fractions as well as in the probable surface deterioration of the antigen, leading to its defective agglutinability. It is suggested to rinse more than five times all glassware that has been cleaned with detergents.

  3. A comparison of titers of anti-Brucella antibodies of naturally infected and healthy vaccinated cattle by standard tube agglutination test, microtiter plate agglutination test, indirect hemagglutination assay, and indirect enzyme-linked immunosorbent assay

    PubMed Central

    Mohan, Anju; Saxena, Hari Mohan; Malhotra, Puneet

    2016-01-01

    Aim: We determined the antibody response in cattle naturally infected with brucellosis and normal healthy adult cattle vaccinated during calf hood with strain 19. Materials and Methods: The antibody titers were measured by standard tube agglutination test (STAT), microtiter plate agglutination test (MAT), indirect hemagglutination assay (IHA), and indirect enzyme-linked immunosorbent assay (iELISA) as per standard protocols. Results: The mean STAT titers were 1.963±0.345 in infected cattle and 1.200±0.155 in healthy vaccinated cattle. The difference was extremely significant (p<0.0001). The mean MAT titers were 2.244±0.727 in infected cattle and 1.200±0.155 in healthy vaccinated cattle. The difference was very significant (p<0.005). The mean IHA titers in infected cattle were 2.284±0.574, and those in healthy vaccinated cattle were 1.200±0.155. The difference was extremely significant (p=0.0002). However, the difference in mean iELISA titers of infected cattle (1.3678±0.014) and healthy vaccinated cattle (1.367±0.014) was non-significant. The infected animals showed very high titers of agglutinating antibodies compared to the vaccinated animals. However, it cannot be ascertained whether these antibodies are due to vaccine or response to infection. Since the infected animals had been vaccinated earlier, the current infection may suggest that vaccination was unable to induce protective levels of antibody. The heightened antibody response after infection may also indicate a secondary immune response to the antigens common to the vaccine strain and wild Brucella organisms. Conclusion: The brucellosis infected animals showed very high titers of agglutinating antibodies compared to the vaccinated animals. PMID:27536032

  4. 9 CFR 147.1 - The standard tube agglutination test. 1

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ..., high agglutinability, but are not sensitive to negative and nonspecific sera. The stock cultures may be... hours at 37 °C. The antigenic composition and purity of the stock cultures should be checked... cultures prepared from the stock cultures of the selected strains. The antigen-growing tubes or...

  5. 9 CFR 147.1 - The standard tube agglutination test. 1

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ..., high agglutinability, but are not sensitive to negative and nonspecific sera. The stock cultures may be... hours at 37 °C. The antigenic composition and purity of the stock cultures should be checked... cultures prepared from the stock cultures of the selected strains. The antigen-growing tubes or...

  6. Evaluation of a C-reactive protein latex agglutination detection test with sera from patients with sexually transmitted diseases.

    PubMed Central

    Schalla, W O; Arko, R J; Thompson, S E

    1984-01-01

    A total of 149 sera, including 79 pre- and posttreatment sera from 33 patients with disseminated gonococcal infections, 18 from patients with uncomplicated gonococcal infections, 6 from patients with pelvic inflammatory disease, 4 from patients with genital Chlamydia trachomatis infections, and 42 from normal volunteers, were examined for C-reactive protein with a latex agglutination C-reactive protein detection kit (Difco Laboratories, Detroit, Mich.). Results were quantitated with LC-Partigen C-reactive protein radial immuno-diffusion plates (Calbiochem-Behring, La Jolla, Calif.). Positive latex agglutination results were observed in all of the pretreatment sera and some of the posttreatment sera of patients with disseminated gonococcal infections and in two sera from patients with pelvic inflammatory disease, which corresponded to quantitative C-reactive protein levels in the radial immunodiffusion plates. C-reactive protein levels were not detectable in the serum samples from normal volunteers or patients with uncomplicated gonococcal infections or genital chlamydial infections. Positive latex agglutination occurred as early as 20 s in sera with high C-reactive protein levels, and all positive results were observed within 90 s of the 3-min test limit. Positive latex test results were obtained with C-reactive protein levels as low as 1 mg/dl (10 micrograms/ml). PMID:6440907

  7. Rapid detection of human group C rotaviruses by reverse passive hemagglutination and latex agglutination tests using monoclonal antibodies.

    PubMed Central

    Kuzuya, M; Fujii, R; Hamano, M; Nagabayashi, T; Tsunemitsu, H; Yamada, M; Nii, S; Mori, T

    1993-01-01

    Reverse passive hemagglutination (RPHA) tests and a latex agglutination test with monoclonal antibodies (MAbs) were developed for the rapid detection of noncultivatable human group C rotaviruses. For RPHA tests, two MAbs, MAb 5A12 recognizing the outer capsid and MAb 13A3 recognizing the inner capsid, were separately used for the coating of sheep erythrocytes (SRBCs). Forty-six fecal samples were examined to confirm the practicality of the tests. As a result, there was concordance between the RPHA test with SRBCs coated with MAb 5A12 and polyacrylamide gel electrophoresis of viral RNA (RNA-PAGE) in 44 (95.6%) of 46 samples, while the diagnoses by the RPHA test with SRBCs coated with MAb 13A3 were in complete agreement with those by RNA-PAGE. Furthermore, a latex agglutination test with MAb 13A3 was also developed, and this test was fast enough and sensitive enough to successfully detect the viruses from most fecal samples within 2 min. The present procedures would be useful for the diagnosis of human group C rotavirus infections in clinical laboratories which are not well equipped. Images PMID:8388891

  8. Rapid detection of infectious mononucleosis-associated heterophile antibodies by a novel immunochromatographic assay and a latex agglutination test.

    PubMed Central

    Farhat, S E; Finn, S; Chua, R; Smith, B; Simor, A E; George, P; Diena, B B; Diena, D; Skulnick, M

    1993-01-01

    A novel immunochromatographic assay, the CARDS O.S. MONO test (Pacific Biotech, San Diego, Calif.), and a latex agglutination test, the Infectious Mononucleosis Kit (Unipath Ltd., Hampshire, United Kingdom) were compared with the Paul-Bunnell-Davidsohn test. Of the 957 serum specimens studied, 78 were positive and 879 were negative by the Paul-Bunnell-Davidsohn test. After discrepancies were resolved by determining Epstein-Barr virus serology, the sensitivities of the CARDS O.S. MONO test and the Infectious Mononucleosis Kit were 91.0 and 96.2%, respectively, and both tests had a specificity and a positive predictive value of 100% and a negative predictive value and overall agreement of greater than 99%. The results show that both tests can accurately detect infectious mononucleosis-associated heterophile antibodies. PMID:8315001

  9. Development of a peptide based latex agglutination assay for serotype identification of foot and mouth disease virus.

    PubMed

    Kaur, Dilpreet; Kaur, Gurpreet; Chandra, Mudit; Saxena, Hari M; Dwivedi, Padam N

    2013-02-01

    Out of 200 serum samples collected from cattle (142) and buffaloes (58) of various ages and sexand subjected to latex agglutination test (LAT) using serotype specific peptides (O, A, Asia 1) and also with peptide for non-structural protein 2B (NSP-2B), 114 (70%) samples were positive against FMDV type 'O', 102 (51%) against serotype 'A' and 104 (52%) against serotype 'Asia 1'. With NSP-2B peptide a total of 71 (35.5%) samples were positive. The results suggest that LAT could be used for the diagnosis of foot and mouth disease virus as it is easy, cheap and effective test.

  10. Evaluation of the MycoAKT latex agglutination test for rapid diagnosis of Mycobacterium avium complex infections.

    PubMed

    Olano, J P; Holmes, H; Woods, G L

    1998-01-01

    Rapid diagnosis of Mycobacterium avium complex (MAC) bacteremia is important for management of patients with the acquired immunodeficiency syndrome who have disseminated MAC. The purpose of this study was to determine the reliability of the MycoAKT latex agglutination test for direct detection of MAC in positive mycobacterial blood cultures. First, colonies of isolates of previously identified mycobacteria, including 35 MAC, were tested. Of the 55 isolates evaluated, 33 were identified as MAC by the latex test, including 31 of the known MAC and 2 M. chelonae (sensitivity, 88.6%; specificity, 90.0%). Second, broth from 20 ESP II and 20 BACTEC 12B bottles seeded with isolates of MAC were tested. Aliquots from 19 (95%) ESP II cultures and 16 (80%) 12B cultures were positive by the latex test. In phase 3, broth from 115 signal-positive ESP II blood cultures were tested by latex agglutination. Forty-three subcultures from these bottles grew mycobacteria (41 MAC and 2 Mycobacterium tuberculosis complex); the remainder grew no organisms. Broth from 40 of the blood cultures (39 that grew MAC and 1 from which no organisms were recovered) were latex positive; thus, the sensitivity, specificity, and positive and negative predictive values of the latex test for direct identification of MAC in ESP II blood cultures were 95.1, 98.6, 97.5, and 97.3%, respectively. The mean time to detection of MAC was 14.6 days (range, 6-34 days) with the direct latex test, compared with 18.3 days (range, 9-36 days) with subculture and probe (p < 0.05).

  11. A prototype of the direct agglutination test kit (DAT-Canis) for the serological diagnosis of canine visceral leishmaniasis.

    PubMed

    Oliveira, Edward; Saliba, Juliana Wilke; Oliveira, Diana; Dias, Edelberto Santos; Paz, Gustavo Fontes

    2016-05-15

    This report describes the stege I/II development of a new direct agglutination test (DAT) for the diagnosis of canine visceral leishmaniasis (CVL) using freeze-dried antigen produced Coomassie blue-stained Leishmania (Leishmania) infantum promastigotes. In stage I, 16 canine serum samples, collected from eight dogs carrying CVL and eight healthy dogs, were assessed with the DAT using 2-mercaptoethanol (2-ME), N-acetyl-cysteine (NAC), kaolin or NAC plus urea (NAC+U) to improve the assay conditions. Stage II assessed the diagnostic accuracy with 100 serum samples collected from dogs with symptomatic CVL and clinically healthy dogs, comparing the four different sample diluents. The CVL-DAT prototype kit showed equivalent performances when 2-ME, NAC or NAC+U were used: 97.1% sensitivity (CI: 83-99.8%), 97% specificity (CI: 88.5-99.5%) and a 97% diagnostic accuracy (CI: 90.8-99.2). With kaolin, a 94.1% sensitivity (CI: 79-99%), 97% specificity (CI: 88.5-99.5%) and 96% diagnostic accuracy were observed (CI: 89.5-98.7), with no statistically significant differences among the four reagents (p=1.0). The NAC plus urea in sample diluent decreased non-specific agglutination, promoted a better defined sharp-edged blue spot and was thus chosen as a component for the new DAT prototype to diagnose canine VL, designated DAT-Canis.

  12. Bayesian estimation of sensitivity and specificity of the modified agglutination test and bioassay for detection of Toxoplasma gondii in free-range chickens

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Toxoplasma gondii infects virtually all warm-blooded animals worldwide. Serological tests, including the modified agglutination test (MAT), are often used to determine exposure to the parasite. The MAT can be used for all hosts because it does not need species-specific reagents and has been shown to...

  13. Reverse-Transcriptase PCR Detection of Leptospira: Absence of Agreement with Single-Specimen Microscopic Agglutination Testing

    PubMed Central

    Waggoner, Jesse J.; Balassiano, Ilana; Mohamed-Hadley, Alisha; Vital-Brazil, Juliana Magalhães; Sahoo, Malaya K.; Pinsky, Benjamin A.

    2015-01-01

    Background Reference diagnostic tests for leptospirosis include nucleic acid amplification tests, bacterial culture, and microscopic agglutination testing (MAT) of acute and convalescent serum. However, clinical laboratories often do not receive paired specimens. In the current study, we tested serum samples using a highly sensitive real-time nucleic acid amplification test for Leptospira and compared results to MAT performed on the same specimens. Methods/Principal Findings 478 serum samples from suspected leptospirosis cases in Rio de Janeiro were tested using a real-time RT-PCR for the diagnosis of leptospirosis, malaria and dengue (the Lepto-MD assay). The Lepto-MD assay detects all species of Leptospira (saprophytic, intermediate, and pathogenic), and in the current study, we demonstrate that this assay amplifies both Leptospira RNA and DNA. Dengue virus RNA was identified in 10 patients, and no cases of malaria were detected. A total of 65 samples (13.6%) were positive for Leptospira: 35 samples (7.3%) in the Lepto-MD assay, 33 samples (6.9%) by MAT, and 3 samples tested positive by both (kappa statistic 0.02). Poor agreement between methods was consistent regardless of the titer used to define positive MAT results or the day of disease at sample collection. Leptospira nucleic acids were detected in the Lepto-MD assay as late as day 22, and cycle threshold values did not differ based on the day of disease. When Lepto-MD assay results were added to the MAT results for all patients in 2008 (n=818), the number of detected leptospirosis cases increased by 30.4%, from 102 (12.5%) to 133 (16.3%). Conclusions/Significance This study demonstrates a lack of agreement between nucleic acid detection of Leptospira and single-specimen MAT, which may result from the clearance of bacteremia coinciding with the appearance of agglutinating antibodies. A combined testing strategy for acute leptospirosis, including molecular and serologic testing, appears necessary to maximize

  14. Prozone effects in microscopic agglutination tests for leptospirosis in the sera of mice infected with the pathogenic Leptospira interrogans serovar Canicola

    PubMed Central

    Shimabukuro, Fabio Hiroto; da Costa, Veruska Maia; da Silva, Rodrigo Costa; Langoni, Hélio; da Silva, Aristeu Vieira; de Carvalho, Lídia Raquel; Domingues, Paulo Francisco

    2013-01-01

    Mice experimentally infected with a pathogenic strain of Leptospira interrogans serovar Canicola produced false negative results (prozone effect) in a microscopic agglutination test (MAT). This prozone effect occurred in several serum samples collected at different post-infection times, but it was more prominent in samples collected from seven-42 days post-infection and for 1:50 and 1:100 sample dilutions. This phenomenon was correlated with increased antibody titres in the early post-infection phase. While prozone effects are often observed in serological agglutination assays for the diagnosis of animal brucellosis and human syphilis, they are not widely reported in leptospirosis MATs. PMID:23903987

  15. Nationwide survey of leptospira antibodies in dogs in Japan: results from microscopic agglutination test and enzyme-linked immunosorbent assay.

    PubMed

    Iwamoto, Emiko; Wada, Yuko; Fujisaki, Yuka; Umeki, Saori; Jones, Miyuki Y; Mizuno, Takuya; Itamoto, Kazuhito; Maeda, Ken; Iwata, Hiroyuki; Okuda, Masaru

    2009-09-01

    Leptospirosis is an infectious disease caused by Leptospira interrogans sensu lato and is common in both humans and animals. In the present study, serum samples were collected from 801 dogs across all 47 prefectures in Japan, and evaluated with a microscopic agglutination test (MAT), using 5 major L. interrogans serovars (Icterohaemorrhagiae, Canicola, Autumnalis, Hebdomadis, and Australis) as antigens, and an enzyme-linked immunosorbent assay (ELISA) using recombinant OmpL1 protein as the antigen. Across all dogs tested, 217 (27.0%) and 29 (3.6%) were MAT- and ELISA-positive, respectively. However, evidence strongly suggests that MAT also detected antibodies produced by vaccination. Of 243 dogs never inoculated with any canine vaccine, 41 (16.9%) from 23 prefectures were MAT and/or ELISA positive. The most commonly detected serovar was Icterohaemorrhagiae (22 dogs, 19 prefectures). Our results suggest that there are dogs with subclinical Leptospira infection throughout Japan. To the best of our knowledge, the present study is the first nationwide survey of Leptospira infection in dogs, and the findings are relevant not only for clinical veterinary medicine but also for public health.

  16. Collaborative evaluation of antigen detection by a commercial latex agglutination test and enzyme immunoassay in the diagnosis of invasive candidiasis.

    PubMed Central

    Lemieux, C; St-Germain, G; Vincelette, J; Kaufman, L; de Repentigny, L

    1990-01-01

    The Cand-Tec Candida detection system and enzyme immunoassay for serum mannan were retrospectively compared in a controlled collaborative evaluation of antigen detection in 32 patients with candidiasis proven by biopsy or culture from a normally sterile site and with sera drawn within 7 days of inclusion. With a threshold titer of 1/8, which excluded false-positive results in 17 hospitalized patients without candidiasis, sensitivities for all 32 patients with candidiasis were 44% for the Cand-Tec assay and 17% for the enzyme immunoassay. Both assays provided greater sensitivity when sera were drawn within 24 h of inclusion in the study and in the category of patients with invasive candidiasis (57% by Cand-Tec and 33% by enzyme immunoassay). The Cand-Tec assay gave false-positive results (titer, greater than or equal to 1/8) in 4 of 6 patients with transient candidemia, in 1 of 20 otherwise healthy patients with rheumatoid factor, and in 1 patient with a positive cryptococcal latex agglutination test. Three serum specimens from 3 of 32 patients with candidiasis contained rheumatoid factor and gave titers of greater than or equal to 1/8 by the Cand-Tec assay. Detection of serum mannan by enzyme immunoassay was less sensitive but more specific than the Cand-Tec Candida detection system for the diagnosis of invasive candidiasis. PMID:2179258

  17. Selective mineral composition, functional test morphology and paleoecology of the agglutinated foraminiferal genus Colominella Popescu, 1998 in the Mediterranean Pliocene (Liguria, Italy)

    NASA Astrophysics Data System (ADS)

    Nicoletta, Mancin; Elena, Basso; Camilla, Pirini; Michael A., Kaminski

    2012-12-01

    Specimens of Colominella (agglutinated Foraminifera) from a Pliocene Mediterranean succession were analysed through a scanning electron microscope (SEM) equipped with an energy-dispersive X-ray spectrometer (EDX) to document their test microstructure. Colominella develops a complex large test with a mostly biserial chamber arrangement, but with the internal chamber lumens partitioned by vertical and horizontal plates that form a labyrinthine structure of alcoves. This internal partition occurs from the first chambers but is completely masked from the outside by the thick wall. The test-wall microstructure is characterized by canaliculi (parapores) that are externally covered by a pavement of agglutinated grains. The mineralogical characterization of the agglutinated grains and the secreted cement shows that the grains are strongly selected as regards to size, arrangement and composition, with the coarse grains placed close to the outer wall. Moreover, these coarse grains, forming a pavement, are made of monocrystalline quartz, whereas the inner part of the skeleton is mostly composed of dolomite. The carbonate cement is less abundant and appears as cloudy light grey areas among the detrital grains. These shell features can be interpreted as functional adaptations to perform kleptoplastidy and/or to house functional photosymbionts, probably induced by stable environmental conditions as in warm shallow waters characterized by low nutrient flux.

  18. Traces of dissolved particles, including coccoliths, in the tests of agglutinated foraminifera from the Challenger Deep (10,897 m water depth, western equatorial Pacific)

    NASA Astrophysics Data System (ADS)

    Gooday, A. J.; Uematsu, K.; Kitazato, H.; Toyofuku, T.; Young, J. R.

    2010-02-01

    We examined four multilocular agglutinated foraminiferan tests from the Challenger Deep, the deepest point in the world's oceans and well below the depth at which biogenic and most detrital minerals disappear from the sediment. The specimens represent undescribed species. Three are trochamminaceans in which imprints and other traces of dissolved agglutinated particles are visible in the orange or yellowish organic test lining. In Trochamminacean sp. A, a delicate meshwork of organic cement forms ridges between the grain impressions. The remnants of test particles include organic structures identifiable as moulds of coccoliths produced by the genus Helicosphaera. Their random alignment suggests that they were agglutinated individually rather than as fragments of a coccosphere. Trochamminacean sp. C incorporates discoidal structures with a central hole; these probably represent the proximal sides of isolated distal shields of another coccolith species, possibly Hayaster perplexus. Imprints of planktonic foraminiferan test fragments are also present in both these trochamminaceans. In Trochamminacean sp. B, the test surface is densely pitted with deep, often angular imprints ranging from roughly equidimensional to rod-shaped. The surfaces are either smooth, or have prominent longitudinal striations, probably made by cleavage traces. We presume these imprints represent mineral grains of various types that subsequently dissolved. X-ray microanalyses reveal strong peaks for Ca associated with grain impressions and coccolith remains in Trochamminacean sp. C. Minor peaks for this element are associated with coccolith remains and planktonic foraminiferan imprints in Trochamminacean sp. A. These Ca peaks possibly originate from traces of calcite remaining on the test surfaces. Agglutinated particles, presumably clay minerals, survive only in the fourth specimen (' Textularia' sp.). Here, the final 4-5 chambers comprise a pavement of small, irregularly shaped grains with flat

  19. [The evaluation of different agglutination and adhesion tests with erythrocytic reagents in determining antibodies to the O and H antigens of Salmonella typhimurium in comparison with immunoenzyme analysis (IEA)].

    PubMed

    Karal'nik, B V; Denisova, T G

    1996-01-01

    The comparison of the effectiveness of EIA with that of a number of agglutination and adhesion tests with erythrocyte diagnostica in the determination of antibodies to different S.typhimurium antigens demonstrated higher sensitivity of EIA. The relative specificity of the determination of O- and H-antibodies in EIA and in agglutination and adhesion tests depended on the isotype of antibodies to be determined and the specificity of sensitins used in the production of immunoreagents.

  20. Comparative assessment of the leprosy antibody absorption test, Mycobacterium leprae extract enzyme-linked immunosorbent assay, and gelatin particle agglutination test for serodiagnosis of lepromatous leprosy.

    PubMed Central

    Escobar-Gutiérrez, A; Amezcua, M E; Pastén, S; Pallares, F; Cázares, J V; Pulido, R M; Flores, O; Castro, E; Rodríguez, O

    1993-01-01

    A comparative assessment of three serological methods for leprosy diagnosis (the fluorescent leprosy antibody absorption [FLA-ABS] test, the Mycobacterium leprae soluble-extract enzyme-linked immunosorbent assay [ELISA], and the M. leprae particle agglutination [MLPA] test) was carried out. The objective was to identify their performance in clinical and epidemiological diagnosis of leprosy. The study group included 45 lepromatous leprosy patients under treatment. Specificity was > 95% for all three assays, and sensitivity was 95, 58, and 74% for the FLA-ABS test, the MLPA test, and the ELISA, respectively. The only cross-reactivity for M. tuberculosis-infected patients was with the soluble-extract ELISA. Although the FLA-ABS test displayed the highest specificity and sensitivity values, it can only be used in well-developed laboratories, and the patient's clinical and epidemiological background must be considered when results are interpreted because the test remains positive after therapeutic success and could be positive for some household contacts. The MLPA test is easier to perform and interpret, and it is adequate for small laboratories and epidemiological studies intended to detect active untreated or irregularly treated leprosy cases. Therefore, the FLA-ABS and MLPA tests are complementary, and both should be used for serodiagnosis of leprosy. PMID:8501238

  1. Agglutination of Helicobacter pylori coccoids by lectins

    PubMed Central

    Khin, Mar Mar; Hua, Jie Song; Ng, Han Cong; Wadström, Torkel; Ho, Bow

    2000-01-01

    AIM: To study the agglutination pattern of Helicobacter pylori coccoid and spiral forms. METHODS: Assays of agglutination and agglutination inhibition were applied using fifteen commercial lectins. RESULTS: Strong agglutination was observed with mannose-specific Concanavalin A (Con A), fucose-specific Tetragonolobus purpureas (Lotus A) and N-acetyl glucosamine-specific Triticum vulgaris (WGA) lectins. Mannose and fucose specific lectins were reactive with all strains of H. pylori coccoids as compared to the spirals. Specific carbohydrates, glycoproteins and mucin were shown to inhibit H. pylori lectin-agglutination reactions. Pre-treatment of the bacterial cells with formalin and sulphuric acid did not alter the agglutination patterns with lectins. However, sodium periodate treatment of bacterial cells were shown to inhibit agglutination reaction with Con A, Lotus A and WGA lectins. On the contrary, enzymatic treatment of coccoids and spirals did not show marked inhibition of H. pylori lectin agglutination. Interes tingly, heating of H. pylori cells at 60 °C for 1 h was shown to augment the agglutination with all of the lectins tested. CONCLUSION: The considerable differences in lectin agglutination patterns seen among the two differentiated forms of H. pylori might be attributable to the structural changes during the events of morphological transformation, resulting in exposing or masking some of the sugar residues on the cell surface. Possibility of various sugar residues on the cell wall of the coccoids may allow them to bind to different carbohydrate receptors on gastric mucus and epithelial cells. The coccoids with adherence characteristics like the spirals could aid in the pathogenic process of Helicobacter infection. This may probably lead to different clinical outcome of H. pylori associated gastroduodenal disease. PMID:11819557

  2. Serological evidence of Leishmania donovani infection in apparently healthy dogs using direct agglutination test (DAT) and rk39 dipstick tests in Kafta Humera, north-west Ethiopia.

    PubMed

    Kalayou, S; Tadelle, H; Bsrat, A; Abebe, N; Haileselassie, M; Schallig, H D F H

    2011-06-01

    Leishmania (Kinetoplastida: Trypanosomatidae) are protozoan parasites of significant medical and veterinary importance. Over the last decade, visceral leishmaniasis (VL) has emerged as a major opportunistic infection associated with HIV/AIDS in North Western Ethiopia. This paper reports on serological evidence of possible Leishmania donovani (L. donovani) infection in dogs using two serological tests: direct agglutination test (DAT) and Kalazar detect rapid test (KDRT). Two hundred and seventeen asymptomatic local breed dogs were examined for L. donovani antibodies. Performance of the DAT and KDRT was assessed in 162 matching samples of blood collected on filter paper and serum, respectively. Using DAT and KDRT testing in parallel, the overall seroprevalence of L. donovani infection was 27.7% and 14.8%, respectively. The degree of agreement was found to be fair (68.8%, k = 0.234). Univariable logistic regression analysis of some risk factors for L. donovani infection in dogs using DAT indicates that place of residence, sex, age, dog keeping purpose and dog housing condition were not significantly associated with seropositivity. The high proportion of positive dogs suggests the exposure of these animals to L. donovani infection and needs further investigation. Isolation and typing of the parasite aiming at confirming the role of these animals in maintenance and transmission of kala-azar is advocated.

  3. Comparison of indirect fluorescent antibody test and the modified agglutination test for the detection of Toxoplasma gondii antibodies in stray dogs from Southern Brazil.

    PubMed

    de Almeida, Jonatas Campos; Frehse, Michelle Salmon; Navarro, Italmar Teodorico; Garcia, João Luis; Biondo, Alexander Welker; Freire, Roberta Lemos

    2016-12-01

    The aim of the present study was to determine the prevalence of antibodies to Toxoplasma gondii by two serological techniques in sera of 364 stray dogs from Brazil by immunofluorescence antibody test (IFAT, cut off point 1:16) and to the modified agglutination test (MAT, cut-off points 1:25 and 1:50). A total of 175/364 (48.07%) sera were positive by IFAT, and 108/364 (29.67%) and 85/364 (23.35%) were positive by MAT with cutoff points 1:25 and 1:50, respectively were positive by MAT. Cohen's Kappa Coefficient between IFAT and MAT was 0.81 (excellent) and 0.66 (substantial) with cutoff points 1:25 and 1:50, respectively. Using IFAT as gold standard, MAT sensitivity and specificity were 78% and 99% for 1:25 and 61% and 99% for 1:50, respectively. The results document of the usefulness of MAT for serological diagnosis because it does not require species-specific conjugate.

  4. Usefulness of the rK39-Immunochromatographic Test, Direct Agglutination Test, and Leishmanin Skin Test for Detecting Asymptomatic Leishmania Infection in Children in a New Visceral Leishmaniasis Focus in Amhara State, Ethiopia

    PubMed Central

    Gadisa, Endalamaw; Custodio, Estefanía; Cañavate, Carmen; Sordo, Luis; Abebe, Zelalem; Nieto, Javier; Chicharro, Carmen; Aseffa, Abraham; Yamuah, Lawrence; Engers, Howard; Moreno, Javier; Cruz, Israel

    2012-01-01

    In areas where visceral leishmaniasis is anthroponotic, asymptomatically infected patients may play a role in transmission. Additionally, the number of asymptomatic patients in a disease-endemic area will also provide information on transmission dynamics. Libo Kemkem and Fogera districts (Amhara State, Ethiopia) are now considered newly established areas to which visceral leishmaniasis is endemic. In selected villages in these districts, we conducted a study to assess the usefulness of different approaches to estimate the asymptomatic infection rate. Of 605 participants, the rK39 immunochromatographic test was able to detect asymptomatic infection in 1.5% (9 of 605), direct agglutination test in 5.3% (32 of 605), and leishmanin skin test in 5.6% (33 of 589); the combined use of serologic methods and leishmanin skin test enabled detecting asymptomatic infection in 10.1% (61 of 605). We conclude that the best option to detect asymptomatic infection in this new visceral leishmaniasis–endemic focus is the combined use of the direct agglutination test and the leishmanin skin test. PMID:22556076

  5. Short report: Seroprevalence of human leptospirosis in Reunion Island (Indian Ocean) assessed by microscopic agglutination test on paper disc-absorbed whole blood.

    PubMed

    Desvars, Amélie; Gigan, Jimmy; Hoarau, Géraldine; Gérardin, Patrick; Favier, François; Michault, Alain

    2011-12-01

    In the last decade, leptospirosis has emerged as a globally important infectious disease. Humans most commonly become infected through occupational, recreational, or domestic contact with the urine of carrier animals, either directly or through contaminated water or soil. The disease occurs in urban areas of industrialized and developing countries as well as rural regions worldwide. We present a retrospective study conducted in 2006 on 2,269 randomly selected Reunion Island inhabitants. Blood sampling was performed on individual blotting papers, and microscopic agglutination test (MAT) was conducted on paper disc-absorbed (PDA) blood. We showed that seroprevalence of leptospirosis was 0.66% ± 0.34 in the global population of Reunion Island, which is 1.78 lower than the seroprevalence estimated 20 years before. The serological method is described, and the results discussion focuses on methodology and socio-economic factors.

  6. Comparison of the H7 latex agglutination test with a fliCh7 real-time PCR assay for confirmation of the H type of Escherichia coli O157:H7

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Escherichia coli O157:H7 is a food-borne pathogen that causes hemorrhagic colitis and hemolytic uremic syndrome. Positive identification of E. coli O157:H7 is made using biochemical tests and latex agglutination using specific antisera. However, under certain conditions, some E. coli O157:H7 isolate...

  7. Validation of the modified agglutination test for the detection of Toxoplasma gondii in free-range chickens by using cat and mouse bioassay.

    PubMed

    Dubey, J P; Laurin, E; Kwowk, O C H

    2016-03-01

    The modified agglutination test (MAT) is one of the most commonly used tests for the detection of antibodies to Toxoplasma gondii in animal and human sera. The objective of the present study was to evaluate the diagnostic accuracy of the MAT and bioassay in free-range/backyard (FR) chickens (Gallus domesticus). Previously-published T. gondii test results from 2066 chickens from 19 countries were compiled for the present study. The frequency of isolation of T. gondii increased for MAT titres between 1:5 and 1:160, and ranged from 61 to 75% for antibody titres of 1:160, 1:320, and ⩾1:640. Twenty-three cats fed pooled hearts from a total of 802 FR seronegative (MAT, <1:5) chickens from several countries did not excrete oocysts, indicating a high negative predictive value of MAT because FR chickens would have been exposed to many microbes; cats are the most sensitive indicators of T. gondii infection in tissues and can excrete millions of oocysts after ingesting even a few bradyzoites. Of the 29 cats in this study, six cats, fed hearts pooled from 15-122 FR chickens, excreted oocysts; but these identifications were likely related to misidentification or prozone. Results of the present study support the validity of MAT for the detection of T. gondii infection in chickens.

  8. Simulation of Mechanical Behavior of Agglutinates

    NASA Technical Reports Server (NTRS)

    Nakagawa, Masami; Moon, Tae-Hyun

    2005-01-01

    Due to lack of "real" lunar soil or even lunar simulant, it is difficult to characterize the interaction between lunar soil (or simulant) with different surfaces that are involved in excavation and processing machinery. One unique feature possessed by lunar soil is the agglutinates produced by repeated high-speed micrometeoroid impacts and subsequent pulverization[l and 2]. The large particles are impacted by micrometeoroids [Fig.l] and pulverized to produce finer particles. This process continues until there are no more "large" particles left on the surface of the moon. Due to high impact speed, the impact melting process fuses fines to make agglutinates such as shown in Fig. 2. We will present a series of simulation results and movies will be shown to indicate brittle behavior of each individual agglutinate and also similar compressibility charts shown by Carrier et al. [3]. Fig. 3 shows our preliminary result of the simulated oedometer tests.

  9. The usefulness of direct agglutination test, enzyme-linked immunosorbent assay and polymerase chain reaction for the detection of Toxoplasma gondii in wild animals.

    PubMed

    Kornacka, Aleksandra; Cybulska, Aleksandra; Bień, Justyna; Goździk, Katarzyna; Moskwa, Bożena

    2016-09-15

    The aim of the study was to compare the usefulness of two antibody-based methods, the direct agglutination test (DAT) and enzyme linked immuosorbent assay (ELISA), with that of the polymerase chain reaction (PCR) for detecting anti-Toxoplasma gondii in samples derived from naturally-infected wild animals. Antibodies against T. gondii were detected in meat juice samples collected from 129 free- living carnivores and omnivores. T. gondii seroprevalence was confirmed in 73,6% of examined samples when DAT and ELISA were used separately, but in only 88,4% samples when both immunological tests were used in parallel. PCR results confirmed the presence of DNA of the parasite in 24 of all the 129 samples. Sixteen samples were classified as positive when all three tests were used. A moderate degree of agreement was found between DAT and ELISA (κ=0.55). However, no agreement was found between the molecular and serological tests: κ=-1.75 for DAT versus PCR; κ=-1.67 ELISA versus PCR. By using both serological tests, antibodies against T. gondii were found in 77.5% of red foxes, 12.5% of badgers, 40% of martens and 8.3% of raccoon dogs. Antibodies against the parasite were detected also in one mink, but not in the sample derived from a polecat. T.gondii DNA was found in the brain tissue of 20 red foxes, three badgers and one raccoon dog. Our studies confirm that ELISA and DAT are suitable and reliable techniques for T. gondii antibody detection in meat juice from wild animals when serum samples are unavailable. Positive results obtained by immunological tests do not always reflect that the host was infected by T. gondii. They indicate only a contact with parasite. PCR should be used to confirm te presence of DNA from T. gondii.

  10. Direct appraisal of latex agglutination testing, a convenient alternative to enzyme immunoassay for the detection of rotavirus in childhood gastroenteritis, by comparison of two enzyme immunoassays and two latex tests.

    PubMed Central

    Sambourg, M; Goudeau, A; Courant, C; Pinon, G; Denis, F

    1985-01-01

    During February and March 1984, 207 fecal samples from infants and children with gastroenteritis were tested for rotavirus with four techniques: two enzyme immunoassays (Rotazyme; Abbott Laboratories, North Chicago, Ill., and Enzygnost-Rotavirus; Calbiochem-Behring, La Jolla, Calif.) and two latex agglutination tests (Rotalex; Orion Research, Inc., Cambridge, Mass., and Slidex Rota-Kit; Biomérieux). All stool samples were also tested for yeasts and bacterial pathogens. Electron microscopy was used to investigate discrepant results. We found 47% positive samples with Enzygnost-Rotavirus, 38% with Rotazyme, 37% with Slidex Rota-Kit, and 34% with Rotalex. No specimen was found positive by Rotazyme only or Slidex Rota-Kit only. On the contrary, 12 samples which were positive with Enzygnost-Rotavirus only and 3 which were positive with Rotalex only were not confirmed as positive by electron microscopy. Both enzyme immunoassays gave 6% equivocal results; Slidex Rota-Kit gave significantly fewer equivocal results than did Rotalex: 2.9% versus 9.7% (P less than 0.01). The sensitivity and specificity of latex tests compared favorably with that of enzyme immunoassays. Latex agglutination tests can be performed by unskilled personnel and are rapid and relatively cheap. They appear to be very suitable for routine laboratory work and may prove useful for large-scale screening in developing countries. PMID:2985650

  11. Direct appraisal of latex agglutination testing, a convenient alternative to enzyme immunoassay for the detection of rotavirus in childhood gastroenteritis, by comparison of two enzyme immunoassays and two latex tests.

    PubMed

    Sambourg, M; Goudeau, A; Courant, C; Pinon, G; Denis, F

    1985-04-01

    During February and March 1984, 207 fecal samples from infants and children with gastroenteritis were tested for rotavirus with four techniques: two enzyme immunoassays (Rotazyme; Abbott Laboratories, North Chicago, Ill., and Enzygnost-Rotavirus; Calbiochem-Behring, La Jolla, Calif.) and two latex agglutination tests (Rotalex; Orion Research, Inc., Cambridge, Mass., and Slidex Rota-Kit; Biomérieux). All stool samples were also tested for yeasts and bacterial pathogens. Electron microscopy was used to investigate discrepant results. We found 47% positive samples with Enzygnost-Rotavirus, 38% with Rotazyme, 37% with Slidex Rota-Kit, and 34% with Rotalex. No specimen was found positive by Rotazyme only or Slidex Rota-Kit only. On the contrary, 12 samples which were positive with Enzygnost-Rotavirus only and 3 which were positive with Rotalex only were not confirmed as positive by electron microscopy. Both enzyme immunoassays gave 6% equivocal results; Slidex Rota-Kit gave significantly fewer equivocal results than did Rotalex: 2.9% versus 9.7% (P less than 0.01). The sensitivity and specificity of latex tests compared favorably with that of enzyme immunoassays. Latex agglutination tests can be performed by unskilled personnel and are rapid and relatively cheap. They appear to be very suitable for routine laboratory work and may prove useful for large-scale screening in developing countries.

  12. Comparison of the dot-immunobinding assay with the serum agglutination test, the rose bengal plate test and the milk ring test for the detection of Brucella antibodies in bovine sera and milk.

    PubMed

    Gürtürk, K; Boynukara, B; Ilhan, Z; Hakki Ekin, I; Gülhan, T

    1999-05-01

    In this study, Brucella antibodies in bovine sera and milk were detected using the dot-immunobinding assay (DIA), the serum agglutination test (SAT), the Rose Bengal plate test (RBPT) and the milk ring test (MRT). For this purpose, a total of 116 paired blood and milk samples collected at the same time from 56 aborted and from 60 healthy dairy cows was examined. In DIA, a nitrocellulose membrane (NCM) was used as the solid phase. Antigen adsorbed on the NCM was extracted from Brucella abortus S99 by heat treatment. The results obtained by DIA were compared with those of SAT, RBPT and MRT. Of the 116 paired blood and milk samples, 24 were positive and 72 were negative by all tests used. Serum samples of six aborted cows were positive by DIA, SAT and RBPT but the milk samples were negative by DIA and MRT. Serum and milk samples of four aborted cows gave positive reaction only by DIA tests. The remaining six aborted cows were negative only by MRT and two of them were negative by both RBPT and MRT. Four sera of healthy cows were found to be positive only by SAT.

  13. Evaluation of chromogenic medium and direct latex agglutination test for detection of group B streptococcus in vaginal specimens from pregnant women in Lebanon and Kuwait.

    PubMed

    Ghaddar, Nahed; Alfouzan, Wadha; Anastasiadis, Elie; Al Jiser, Tamima; Itani, Saad Eddine; Dernaika, Racha; Eid, Toufic; Ghaddar, Ali; Charafeddine, Adib; Dhar, Rita; El Hajj, Hiba

    2014-10-01

    This study was undertaken to evaluate chromogenic medium and a direct latex agglutination test (DLA) for detection of Group B Streptococcus (GBS) in the vaginal specimens of pregnant women, and to ascertain the prevalence of GBS in this population in Kuwait and Lebanon. Vaginal swabs, collected from women at 35-37 weeks of gestation, were cultured on 5 % sheep blood agar (SBA), colistin nalidixic acid agar (CNA), Strept B Select chromogenic agar (SBS) as well as Lim enrichment broth in 168 cases in Lebanon while only SBA was used for 1391 samples in Kuwait. In addition, vaginal samples from 102 GBS-positive and 20 GBS-negative women near the time of delivery were collected in Kuwait for evaluation of the DLA test. During the study period, the prevalence of GBS colonization was determined to be 20.7 % (288/1391) in Kuwait while 18.4 % (31) of 168 pregnant women in Lebanon had vaginal cultures positive for GBS. By direct plating of vaginal swabs on the three media used, the isolation rates of GBS were 51.6, 64.5 and 77.4 % on SBA, CNA and SBS, respectively, which increased to 90.35, 93.1 and 96.8 %, respectively, following subculture in Lim broth after 18 h of incubation. The sensitivity of the DLA test was found to be dependent on the density of GBS colonization, resulting in 100 % sensitivity and 100 % specificity for heavy (>10(2) c.f.u. per swab) and moderately heavy (50-100 c.f.u. per swab) growth of GBS. However, for vaginal specimens yielding <50 c.f.u. per swab, the sensitivity, specificity, positive and negative predictive values of the DLA test were 100, 55.5, 63.6 and 100 %, respectively. In conclusion, a chromogenic agar, such as SBS, and a DLA test can be used for rapid detection of GBS in pregnant women. The DLA test, in particular, could prove to be a useful tool for immediate detection of GBS in women near delivery so that intrapartum antibiotic prophylaxis can be initiated.

  14. Spatial and spatio-temporal clustering of overall and serovar-specific Leptospira microscopic agglutination test (MAT) seropositivity among dogs in the United States from 2000 through 2007.

    PubMed

    Gautam, Raju; Guptill, Lynn F; Wu, Ching Ching; Potter, Adam; Moore, George E

    2010-08-01

    Leptospirosis is a re-emerging disease of dogs in the United States (U.S.). This paper reports the findings of a retrospective study conducted to determine if seroreactivity to Leptospira microscopic agglutination test (MAT) among dogs in the U.S. clustered in space and time. The study utilized canine sera submitted to a commercial laboratory for leptospiral MAT from January 2000 through December 2007. There were 31,869 serum samples submitted by veterinarians from 3156 zip code locations across the U.S. Results of MAT were considered positive at titers of > or = 1:1600. Spatial and spatial-temporal scan statistics were used to identify statistically significant clusters of seroreactivity to Leptospira (overall and individual serovars) using recorded test request dates and locations of the centroid of the zip code reported for each serum sample. There were 2469 positive MAT results with a titer > or = 1:1600 to at least one of seven Leptospira serovars. Two relevant spatial clusters of 26.3 and 246.5 km radius were identified (P=0.001). The primary cluster was located in the northeastern part of Illinois including Chicago and surrounding areas (232 [14.4%] of 1612 MAT positive; RR=1.95). The secondary cluster covered the central part of Texas (292 [12.62%] of 2314 MAT positive; RR=1.71). Eight space-time clusters of overall MAT positivity were identified (29-335 km radius; P=0.001-0.048 and RR=3.98-24.69) that covered different geographic locations for different time points. Spatial and space-time clusters for individual serovars were also identified for six serovars: eight each of Grippotyphosa and Pomona, seven of Bratislava, five of Autumnalis, and three each of Icterohaemorrhagiae and Canicola. In conclusion Leptospira seropositivity in dogs tended to have distinctive clusters in space and space-time. Most of the space-time clusters of overall Leptospira MAT seropositivity were associated with cluster events for individual serovars. Further investigation is

  15. Bayesian estimation of true prevalence, sensitivity and specificity of indirect ELISA, Rose Bengal Test and Slow Agglutination Test for the diagnosis of brucellosis in sheep and goats in Bangladesh.

    PubMed

    Rahman, A K M Anisur; Saegerman, Claude; Berkvens, Dirk; Fretin, David; Gani, Md Osman; Ershaduzzaman, Md; Ahmed, Muzahed Uddin; Emmanuel, Abatih

    2013-06-01

    The true prevalence of brucellosis and diagnostic test characteristics of three conditionally dependent serological tests were estimated using the Bayesian approach in goats and sheep populations of Bangladesh. Serum samples from a random selection of 636 goats and 1044 sheep were tested in parallel by indirect ELISA (iELISA), Rose Bengal Test (RBT) and Slow Agglutination Test (SAT). The true prevalence of brucellosis in goats and sheep were estimated as 1% (95% credibility interval (CrI): 0.7-1.8) and 1.2% (95% CrI: 0.6-2.2) respectively. The sensitivity of iELISA was 92.9% in goats and 92.0% in sheep with corresponding specificities of 96.5% and 99.5% respectively. The sensitivity and specificity estimates of RBT were 80.2% and 99.6% in goats and 82.8% and 98.3% in sheep. The sensitivity and specificity of SAT were 57.1% and 99.3% in goats and 72.0% and 98.6% in sheep. In this study, three conditionally dependent serological tests for the diagnosis of small ruminant brucellosis in Bangladesh were validated. Considerable conditional dependence between IELISA and RBT and between RBT and SAT was observed among sheep. The influence of the priors on the model fit and estimated parameter values was checked using sensitivity analysis. In multiple test validation, conditional dependence should not be ignored when the tests are in fact conditionally dependent.

  16. INACTIVATION OF SEXUAL AGGLUTINATION IN HANSENULA WINGEI AND SACCHAROMYCES KLUYVERI BY DISULFIDE-CLEAVING AGENTS.

    PubMed

    TAYLOR, N W

    1964-10-01

    Taylor, Neil W. (Northern Regional Research Laboratory, Peoria, Ill.). Inactivation of sexual agglutination in Hansenula wingei and Saccharomyces kluyveri by disulfide-cleaving agents. J. Bacteriol. 88:929-936. 1964.-Mating types of both Hansenula wingei and Saccharomyces kluyveri can be activated to produce uniformly strong sexual agglutination by treatments with various solvents, such as 8 m LiBr. The strongly agglutinative mating-type preparations were irreversibly inactivated for sexual agglutination by various chemical treatments. Type 5 of H. wingei was inactivated by disulfide-cleaving reagents, but type 21 of H. wingei was not. Type 3 of S. kluyveri was more sensitive than type 26 of S. kluyveri to inactivation by disulfide-cleaving reagents. Comparison of sensitivities to these and other treatments, plus a moderately strong cross-agglutination between type 3 and type 21, indicated that the sexually agglutinative elements on type 3 are similar to type 5, and those of type 21 are similar to those of type 26. Inactivation-rate experiments showed a loss of agglutinative ability according to a sigmoid decrement with time for both types 5 and 21. The apparent extent of inactivation depended markedly on agglutination test conditions. Results of these experiments were interpreted to indicate tentatively, first, that the agglutinative elements of both types of a species are proteins and, second, that several agglutinating linkages are formed between any two cells in sexual agglutination.

  17. Diagnosis of myocardial infarction based on lectin-induced erythrocyte agglutination: a feasibility study

    NASA Astrophysics Data System (ADS)

    Bocsi, József; Nieschke, Kathleen; Mittag, Anja; Reichert, Thomas; Laffers, Wiebke; Marecka, Monika; Pierzchalski, Arkadiusz; Piltz, Joachim; Esche, Hans-Jürgen; Wolf, Günther; Dähnert, Ingo; Baumgartner, Adolf; Tarnok, Attila

    2014-03-01

    Myocardial infarction (MI) is an acute life-threatening disease with a high incidence worldwide. Aim of this study was to test lectin-carbohydrate binding-induced red blood cell (RBC) agglutination as an innovative tool for fast, precise and cost effective diagnosis of MI. Five lectins (Ricinus communis agglutinin (RCA), Phaseolus vulgaris erythroagglutinin (PHA), Datura stramonium agglutinin (DSA), Artocarpus agglutinin (ArA), Triticum agglutinin (TA)) were tested for ability to differentiate between agglutination characteristics in patients with MI (n = 101) or angina pectoris without MI (AP) (n = 34) and healthy volunteers (HV) as control (n =68) . RBC agglutination was analyzed by light absorbance of a stirred RBC suspension in the green to red light spectrum in an agglutimeter (amtec, Leipzig, Germany) for 15 min after lectin addition. Mean cell count in aggregates was estimated from light absorbance by a mathematical model. Each lectin induced RBC agglutination. RCA led to the strongest RBC agglutination (~500 RBCs/aggregate), while the others induced substantially slower agglutination and lead to smaller aggregate sizes (5-150 RBCs/aggregate). For all analyzed lectins the lectin-induced RBC agglutination of MI or AP patients was generally higher than for HV. However, only PHA induced agglutination that clearly distinguished MI from HV. Variance analysis showed that aggregate size after 15 min. agglutination induced by PHA was significantly higher in the MI group (143 RBCs/ aggregate) than in the HV (29 RBC-s/aggregate, p = 0.000). We hypothesize that pathological changes during MI induce modification of the carbohydrate composition on the RBC membrane and thus modify RBC agglutination. Occurrence of carbohydrate-lectin binding sites on RBC membranes provides evidence about MI. Due to significant difference in the rate of agglutination between MI > HV the differentiation between these groups is possible based on PHA-induced RBC-agglutination. This novel assay

  18. Mannanoligosaccharide agglutination by Salmonella enterica strains isolated from carrier pigs

    PubMed Central

    Borowsky, Luciane; Corção, Gertrudes; Cardoso, Marisa

    2009-01-01

    Type-1 fimbriae are associated with most Salmonella enterica serovars and are an essential factor for host colonization. Mannanoligosaccharides (MOS), a prebiotic that is agglutinated by type-1 fimbriae, are proposed for the control of enterobacteria colonization and may be an alternative to Salmonella control in pigs. The aim of this study was to evaluate the capability of porcine Salmonella strains to adhere to MOS in vitro. A total of 108 strains of Salmonella sp. isolated from carrier pigs were evaluated for the amplification of fimA and fimH genes, agglutination of MOS and hemagglutination. In all tested strains, amplicons of expected size were detected for both fimA and fimH gene. In the hemagglutination assays, 31 (28.7%) strains presented mannose–sensitive agglutination of erythrocytes, indicating that the strains were expressing type-1 fimbriae. Considering only strains expressing the type-1 fimbriae, 23 (74.2%) presented a strong agglutination of MOS, 3 (9.6%) a weak reaction and 5 (16.2%) none. The results indicate that Salmonella enterica strains expressing type-1 fimbriae can agglutinate effectively in vitro to MOS. PMID:24031388

  19. Detection of staphylococcal exfoliative toxin by slide latex agglutination.

    PubMed Central

    Murono, K; Fujita, K; Yoshioka, H

    1988-01-01

    A simple and rapid method in which slide latex agglutination was used was developed to detect the exfoliative toxin (ET) elaborated by clinical isolates. ET types A and B (ET-A and ET-B) were purified by plate gel isoelectrofocusing, and anti-ET sera were obtained by immunizing rabbits. A specific immunoglobulin G antitoxin was then prepared from the immunized rabbit sera by fast protein liquid chromatography, and latex particles were coated with the antitoxin. Of 74 staphylococcal strains isolated from patients with staphylococcal scalded skin syndrome, 61 strains were found to produce ET by the newborn mouse bioassay. All 61 strains were shown to be positive for ET-A and ET-B production by the slide latex agglutination method. The lowest concentration of ETs detected by the latex agglutination method was 0.5 microgram/ml, which was much lower than that detected by the double immunodiffusion method, with a sensitivity of 50 micrograms/ml. It is crucial to prove ET production by clinical isolates for the diagnosis and surveillance of staphylococcal scalded skin syndrome. The latex agglutination method is a sensitive, simple, and rapid test which can be used as an alternative to the newborn mouse bioassay. Images PMID:3343322

  20. Performance of commercial ELISA and agglutination test kits for the detection of anti-Toxoplasma gondii antibodies in serum and muscle fluid of swine infected with 100, 300, 500 or 1000 oocysts.

    PubMed

    Forbes, Lorry B; Parker, Sarah E; Gajadhar, Alvin A

    2012-12-21

    Serum and tissue fluid samples from experimentally infected swine were tested for antibodies to Toxoplasma gondii using both an indirect ELISA and a modified agglutination test (MAT) available commercially in kit form. Ten 8-9 week-old swine were fed meatballs containing 100, 300, 500 or 1000 T. gondii oocysts and three control animals were fed meatballs with no oocysts. Post-inoculation blood samples were collected weekly until euthanasia at 35-63 days post inoculation (DPI). Tissue fluid was obtained from diaphragm, heart and sternomastoideus muscles post-mortem. By 16 DPI, nine of 10 inoculated pigs were detected serologically using ELISA at a pre-test serum dilution of 1:50 and all ten pigs were detected by the MAT at a serum dilution of 1:25. The last pig became positive on ELISA by 21 DPI and the 10 pigs maintained their serological status for the duration of the experiment. Heart muscle was the best overall source of tissue fluid for ELISA and all six pigs inoculated with either 500 or 1000 oocysts were positive using either diaphragm or heart tissue fluid samples. However, 10 of 18 fluid samples from pigs receiving ≤ 300 oocysts were not detected using ELISA, including 5 of 6 from sternomastoideus muscle. The MAT used at a 1:10 pre-test dilution of tissue fluid correctly identified all 10 inoculated pigs regardless of the source muscle. Based on these data, we conclude that either assay would be useful for herd evaluation or surveillance testing using sera, and the MAT would be a good candidate assay for testing tissue fluid for the same purposes.

  1. Removal of Lipid from Serum Increases Coherence between Brucellosis Rapid Agglutination Test and Enzyme-linked Immunosorbent Assay in Bears in Alaska, USA.

    PubMed

    Godfroid, Jacques; Beckmen, Kimberlee; Helena Nymo, Ingebjørg

    2016-10-01

    In cases of chronic Brucella spp. infection, results of the rose bengal plate test (RBPT) and indirect enzyme-linked immunosorbent assay (ELISA) should be coherent, as reported in controlled conditions in the literature. We compared RBPT and ELISA results in 58 Alaska grizzly bears ( Ursus arctos horribilis), eight Kodiak brown bears ( Ursus arctos middendorffi), and six Alaska Peninsula brown bears ( Ursus arctos gyas). Of the 72 bears tested, 42 (58%) were ELISA positive and 53 (73%) were RBPT positive. However, the coherence between the tests was only fair (K=0.37, SE=0.11), suggesting that either the serologic results were not compatible with Brucella spp. infection or that there was a technical problem with the tests. To address a potential technical problem, we performed a 30-min chloroform/centrifugation cleanup. Following cleanup, the ELISA identified 43 positives (59%) and the RBPT identified 47 (65%), and the coherence between the tests was much improved (K=0.80, SE=0.07). We recommend cleaning wildlife sera with a high lipid content before performing RBPT and performing RBPT and ELISA in parallel to assess coherence. Our results suggest that Alaskan brown bears have been exposed to Brucella spp.

  2. Fermi's Large Area Telescope (LAT)

    NASA Video Gallery

    Fermi’s Large Area Telescope (LAT) is the spacecraft’s main scientificinstrument. This animation shows a gamma ray (purple) entering the LAT,where it is converted into an electron (red) and a...

  3. Overall evaluation of an immunological latex agglutination system for fecal occult blood testing in the colorectal cancer screening program of Florence.

    PubMed

    Rubeca, Tiziana; Peruzzi, Benedetta; Confortini, Massimo; Rapi, Stefano

    2012-10-08

    Several immunological fecal occult blood tests (FOBT) are currently available for colorectal cancer (CRC) screening. We compared the HM Jack (Jack) (Kiowa, Japan), with the OC-Hemodia (OC) (Eiken, Japan) in use in the Florence screening program. Aims of the study were: (i) to investigate the diagnostic performance and the best cutoff value for Jack; (ii) to evaluate the handiness of sampling tubes; (iii) to compare costs. A total of 5,044 subjects were screened with both tests. Sampling tube investigation was performed running each sample on both instruments. A number of 352 subjects positive for at least one test (175 OC, 310 Jack) were selected for further investigations, while 46 subjects refused further assessments. Analysis of costs related to the assessment phase was performed on the basis of Tuscany region's fares. Amongst the 306 subjects investigated, 9 CRC and 67 advanced adenomas (AdA) were detected. Detection rates (DR) were 1.4‰ for CRC and 9.6‰ for AdA. After Jack cutoff optimization, DR for CRC+AdA resulted in 11.1‰ for OC and 13.3‰ for Jack (p=0.041). Sensitivity of the methods was 73.7 for OC and 88.2 for Jack; specificity was 97.6 for OC and 96.0 for Jack, resulting in an increase of the required assessments from 3.5% to 5.1%. No differences were observed between sampling methods. Despite the lower specificity of Jack, its greater sensitivity makes the method attractive for screening programs. An increase of the costs of 30% for every subject investigated for pathological lesion (CRC+AdA) may be thus foreseen.

  4. Aeromonas hydrophila typing scheme based on patterns of agglutination with erythrocytes and yeast cells.

    PubMed Central

    Adams, D; Atkinson, H M; Woods, W H

    1983-01-01

    An agglutination typing scheme has been developed for strains of Aeromonas hydrophila. Primary agglutination typing is based on testing agar-grown A. hydrophila cells with human, horse, rat, and guinea pig erythrocytes and Saccharomyces cerevisiae cells. Further subdivision of primary groups is based firstly on whether yeast cell agglutination is inhibited by a D-mannose polymer, yeast mannan, and secondly on patterns of inhibition of hemagglutination by yeast mannan and the monomeric sugars L-fucose, D-galactose, and D-mannose. A total of 320 isolates were tested, and these were divisible into 39 distinct types on the basis of this scheme. Application of this typing scheme in the future to isolates of A. hydrophila known to be associated with human infection may enable correlations to be made between particular agglutination types and human pathogenicity. PMID:6841579

  5. Light-scattering analysis of ultrasonic wave's influence on the RBC agglutination in vitro

    NASA Astrophysics Data System (ADS)

    Doubrovski, Valeri A.; Dvoretski, Costanten N.

    1999-04-01

    Elastic light scattering is one of the most often used optical methods to analyze the cells agglutination reaction - the base of a great number of medical diagnostic test and biomedical investigations. The increase of the resolution of methods and apparatus towards the induced cells aggregation - the foundation of the reaction of agglutination, is quite an actual problem. The solution of this problem increases the reliability of the diagnostic test and gives an opportunity to achieve the diagnostic information in the cases when the traditional approaches do not lead to the diagnostic results. The attempt to increase the resolution of the immune reaction analyzer by means of ultrasonic waves action on the reagent mixture in vitro is taken in this paper. The RBC agglutination reaction which is usually used for the blood group type examination is chosen as an example of an object of the investigation. Different laser optical trains of the devices based on the turbidimetric and nephelometric methods and their combination are analyzed here. The influence of the ultrasonic wave time interval action and of the features of the sample preparation procedure on the resolution towards the agglutination process was investigated in this work. It is shown that the ultrasonic wave action on the reagent mixture leads to a large gain in the resolution of the device towards the RBC agglutination process. The experiments showed that the resolution of the device was enough to register the agglutination process even for the erythrocytes with weak agglutination ability when the reaction was invisible without ultrasonic action. It occurred that the diagnostic test time was more than by an order shortened due to the ultrasonic wave action. The optimal ultrasonic time interval action, the sample preparation technology and experimental technique were defined. The principle of the ultrasonic wave action on the cells agglutination process suggested here can be spread out on the immune

  6. Comparison of latex agglutination, wet preparation, and culture for the detection of Trichomonas vaginalis

    PubMed Central

    Adu-Sarkodie, Y; Opoku, B; Danso, K; Weiss, H; Mabey, D

    2004-01-01

    Objectives: To compare the performance of three diagnostic methods for Trichomonas vaginalis infection—latex agglutination, saline wet mount, and culture. Methods: Vaginal swabs from 3807 women attending antenatal clinics were tested for the presence of T vaginalis by latex agglutination. All positives and the following two negatives were tested by wet preparation and culture. Results: The prevalence of infection by latex agglutination was 5.4%. Using an expanded gold standard based on the wet mount and culture results, the sensitivity of the latex agglutination test was 98.8% (95% CI 95.9 to 99.9) and specificity was 92.1 (89.2 to 94.5). The kappa index for test agreement was 0.93 for latex and culture and 0.88 for latex and wet preparation. Conclusion: The latex agglutination test is a highly sensitive test for detecting T vaginalis infection. It is a simple rapid test and has the potential for use in screening and diagnostic settings. PMID:15170003

  7. A particle agglutination assay for rapid identification of heparin binding to coagulase-negative staphylococci.

    PubMed

    Pascu, C; Hirmo, S; Ljungh, A; Wadström, T

    1996-10-01

    The heparin-binding properties of six different species of coagulase-negative staphylococci were examined by a particle agglutination assay. Heparin (mol. wt 4000-6000), mildly treated with sodium periodate, was covalently coupled to amino-modified latex beads (0.72 micron diameter). The particle agglutination assay was validated by comparing results with the adhesion (percentage binding of adherent cells) of coagulase-negative staphylococcal strains to heparinised microtitration plates. Of 38 different coagulase-negative staphylococcal strains tested, 30 showed agglutination reactivity with heparin-coated latex beads. Strains of different coagulase-negative staphylococcal species agglutinated heparin-coated latex beads to various extents (e.g., cells of Staphylococcus haemolyticus strains reacted more strongly than cells of S. epidermidis strains). The agglutination reaction was significantly inhibited by fucoidan, suramin, lambda-carrageenan and other sulphated compounds, but not by non-sulphated carbohydrate polymers such as hyaluronic acid. Agglutination of staphylococcal cells with heparin-coated latex beads was completely blocked by a cell-surface extract. These results suggest that structures responsible for heparin binding are exposed on the cell surface.

  8. Are the Major Agglutinative Languages Genetically Related?

    ERIC Educational Resources Information Center

    Hakola, H. P. A.

    1989-01-01

    Examination of accidental CVC and CV correspondences among languages representing 5 large families of agglutinative languages found that comparison pairs had much more similarity between basic 100-word vocabularies than would have been possible by mere chance, supporting the hypothesis that those 5 language families were mutually related.…

  9. Process to create simulated lunar agglutinate particles

    NASA Technical Reports Server (NTRS)

    Gustafson, Robert J. (Inventor); Gustafson, Marty A. (Inventor); White, Brant C. (Inventor)

    2011-01-01

    A method of creating simulated agglutinate particles by applying a heat source sufficient to partially melt a raw material is provided. The raw material is preferably any lunar soil simulant, crushed mineral, mixture of crushed minerals, or similar material, and the heat source creates localized heating of the raw material.

  10. Extracellular calcium is involved in egg yolk-induced head-to-head agglutination of bull sperm.

    PubMed

    Yang, D H; McMillan, A G; Standley, N T; Shannon, P; Xu, Z Z

    2012-10-15

    Head-to-head agglutination of bull sperm occurs when semen is highly diluted in an egg yolk-citrate diluent without streptomycin. The objectives were to investigate causes of sperm agglutination and the underlying mechanism. Aliquots of bull semen were diluted in a base diluent (BD) supplemented with various test components and the percentage of agglutinated sperm (% AggSp) was quantified at 1, 5, 24, 48, and 72 h of incubation. When sperm were incubated at 22 °C, no agglutination was observed in BD for up to 72 h, whereas the % AggSp was 5.0, 41.7, 72.2, 91.1, and 92.8% in BD + 5% egg yolk (BD + EY) at 1, 5, 24, 48 and 72 h, respectively. However, no sperm agglutination was observed in BD + EY if incubation temperature was 37 °C. Addition of 5 or 10 mM ethylenebis (oxyethyleneni-trilo) tetra-acetic acid to BD + EY reduced the % AggSp from 95% to <5% at 72 h (P < 0.001), but addition of 5 mM CaCl(2) to BD failed to induce sperm agglutination in the absence of egg yolk, implicating calcium and other factors in egg yolk. Addition of the citrate-soluble fraction (CSF) of egg yolk to BD induced sperm agglutination similar to whole egg yolk, whereas water- and saline-soluble fractions of egg yolk were ineffective. The sperm-agglutinating efficacy of CSF (the % AggSp = 95% at 72 h) was reduced by dialysis (20%; P < 0.05), partially restored by addition of 5 mM CaCl2 (70%; P < 0.05), but the calcium effect was neutralized by addition of 5 mM ethylenebis (oxyethyleneni-trilo) tetra-acetic acid (1.7%; P < 0.05), again implicating calcium. Addition of 30 μM of a protein kinase A inhibitor (H-89) to an agglutinating diluent failed to inhibit sperm agglutination, whereas addition of 2 mM of a cAMP analogue, dbcAMP, to a nonagglutinating diluent failed to induce sperm agglutination. Agglutination status had no effect on sperm plasma membrane/acrosome status and mitochondrial membrane potential. In conclusion, calcium and other component(s) in the CSF of egg yolk induced head

  11. [Diagnosis of some yeasts in Metschnikowia genus with the aid of Salmonella cholerae-suis O agglutinating serum (author's transl)].

    PubMed

    Aksoycan, N

    1980-04-01

    In this paper a common antigenic factor among Salmonella choleraesuis 0 antigen and standard Metschnikowia bicuspidata var. bicuspidata and M. pulcherrima strains is shown. This common factor was not present in M. bicuspidata var. australis, M. bicuspidata var. california, M. krissii and M. reukaufii strains. M. bicuspidata var. chathamia and M. zobellii showed agglutination in the previous experiments. According to these results, the use of S. choleraesuis 0:6,7 agglutinating serum for slide and tube agglutination tests can be a diagnostic aid for typing above mentioned Metschnikowia strains along with the other tests.

  12. Evaluation of the usefulness of six commercial agglutination assays for serologic diagnosis of toxoplasmosis.

    PubMed

    Villard, Odile; Cimon, Bernard; Franck, Jacqueline; Fricker-Hidalgo, Hélène; Godineau, Nadine; Houze, Sandrine; Paris, Luc; Pelloux, Hervé; Villena, Isabelle; Candolfi, Ermanno

    2012-07-01

    Six agglutination tests for detecting Toxoplasma gondii-specific antibodies (immunoglobulin G or M) in serum were performed and compared. In total, 599 sera were examined using direct and indirect agglutination assays. Sensitivity varied from 93.7% to 100% and specificity from 97.1% to 99.2%. In a selected population with interfering diseases, the percentage of false positives ranged from 4.3% to 10.9%. Although an overall agreement of 100% was found for chronic toxoplasmosis, sensitivity for the detection of confirmed acute toxoplasmosis ranged from 86.4% to 97.3%. Regarding the large variability in terms of the performance of the 6 assays, tests based on the hemagglutination principle were found to be better than the other agglutination tests for all the panels evaluated, meaning that they could be used as qualitative or semiquantitative low-cost screening assays.

  13. LAT Perspectives in Detection of High Energy Cosmic Ray Electrons

    NASA Technical Reports Server (NTRS)

    Moiseev, Alexander; Ormes, J. F.; Funk, Stefan

    2007-01-01

    The GLAST Large Area Telescope (LAT) science objectives and capabilities in the detection of high energy electrons in the energy range from 20 GeV to approx. 1 TeV are presented. LAT simulations are used to establish the event selections. It is found that maintaining the efficiency of electron detection at the level of 30% the residual hadron contamination does not exceed 2-3% of the electron flux. LAT should collect approx. ten million of electrons with the energy above 20 GeV for each year of observation. Precise spectral reconstruction with high statistics presents us with a unique opportunity to investigate several important problems such as studying galactic models of IC radiation, revealing the signatures of nearby sources such as high energy cutoff in the electron spectrum, testing the propagation model, and searching for KKDM particles decay through their contribution to the electron spectrum.

  14. Alterations in the NF2/LATS1/LATS2/YAP Pathway in Schwannomas.

    PubMed

    Oh, Ji-Eun; Ohta, Takashi; Satomi, Kaishi; Foll, Matthieu; Durand, Geoffroy; McKay, James; Le Calvez-Kelm, Florence; Mittelbronn, Michel; Brokinkel, Benjamin; Paulus, Werner; Ohgaki, Hiroko

    2015-10-01

    Schwannomas are benign nerve sheath tumors composed of well-differentiated Schwann cells. Other than frequent NF2 (neurofibromatosis type 2) mutations (50%-60%), their molecular pathogenesis is not fully understood. LATS1 and LATS2 are downstream molecules of NF2 and are negative regulators of the yes-associated protein (YAP) oncogene in the Hippo signaling pathway. We assessed mutations of the NF2, LATS1, and LATS2 genes, promoter methylation of LATS1 and LATS2, and expression of YAP and phosphorylated YAP in 82 cases of sporadic schwannomas. Targeted sequencing using the Ion Torrent Proton instrument revealed NF2 mutations in 45 cases (55%), LATS1 mutations in 2 cases (2%), and LATS2 mutations in 1 case (1%) of schwannoma. Methylation-specific polymerase chain reaction showed promoter methylation of LATS1 and LATS2 in 14 cases (17%) and 25 cases (30%), respectively. Overall, 62 cases (76%) had at least 1 alteration in the NF2, LATS1, and/or LATS2 genes. Immunohistochemistry revealed nuclear YAP expression in 18 of 42 cases of schwannoma (43%) and reduced cytoplasmic phosphorylated YAP expression in 15 of 49 cases of schwannoma (31%), all of which had at least 1 alteration in the NF2, LATS1, and/or LATS2 genes. These results suggest that an abnormal Hippo signaling pathway is involved in the pathogenesis of most sporadic schwannomas.

  15. Ultrasensitive Antibody Detection by Agglutination-PCR (ADAP)

    PubMed Central

    2016-01-01

    Antibodies are widely used biomarkers for the diagnosis of many diseases. Assays based on solid-phase immobilization of antigens comprise the majority of clinical platforms for antibody detection, but can be undermined by antigen denaturation and epitope masking. These technological hurdles are especially troublesome in detecting antibodies that bind nonlinear or conformational epitopes, such as anti-insulin antibodies in type 1 diabetes patients and anti-thyroglobulin antibodies associated with thyroid cancers. Radioimmunoassay remains the gold standard for these challenging antibody biomarkers, but the limited multiplexability and reliance on hazardous radioactive reagents have prevented their use outside specialized testing facilities. Here we present an ultrasensitive solution-phase method for detecting antibodies, termed antibody detection by agglutination-PCR (ADAP). Antibodies bind to and agglutinate synthetic antigen–DNA conjugates, enabling ligation of the DNA strands and subsequent quantification by qPCR. ADAP detects zepto- to attomoles of antibodies in 2 μL of sample with a dynamic range spanning 5–6 orders of magnitude. Using ADAP, we detected anti-thyroglobulin autoantibodies from human patient plasma with a 1000-fold increased sensitivity over an FDA-approved radioimmunoassay. Finally, we demonstrate the multiplexability of ADAP by simultaneously detecting multiple antibodies in one experiment. ADAP’s combination of simplicity, sensitivity, broad dynamic range, multiplexability, and use of standard PCR protocols creates new opportunities for the discovery and detection of antibody biomarkers. PMID:27064772

  16. The chemistry of some individual lunar soil agglutinates

    NASA Technical Reports Server (NTRS)

    Gibbons, R. V.; Hoerz, F.; Schaal, R. B.

    1976-01-01

    The inquiry is centered on the composition of agglutinate glasses examined via microprobe techniques. The glass chemistry of the agglutinates is brought into relation with compositions of constituent detritus and bulk compositions of the parent soils, with recent reported results taken into cognizance. Electron microprobe analysis data were examined for possible chemical fractionation resulting from meteoritic impacts and formation of agglutinates in the lunar regolith; individual agglutinates from lunar soils 78222, 71061, and 60009 were probed. Differences between impact glasses and corresponding bulk soils were scrutinized. Agglutinate glass analyses tend to cluster near the bulk soil compositions. A slight enrichment in mafic elements in grand averages of the agglutinate clusters relative to the bulk soils was found. Evidence of total impact melts and minor partial shock melts is examined.

  17. Mass-based readout for agglutination assays

    NASA Astrophysics Data System (ADS)

    Chunara, Rumi; Godin, Michel; Knudsen, Scott M.; Manalis, Scott R.

    2007-11-01

    We present a mass-based readout for agglutination assays. The suspended microchannel resonator (SMR) is used to classify monomers and dimers that are formed during early stage aggregation, and to relate the total count to the analyte concentration. Using a model system of streptavidin functionalized microspheres and biotinylated antibody as the analyte, we obtain a dose-response curve over a concentration range of 0.63-630nM and show that the results are comparable to what has been previously achieved by image analysis and conventional flow cytometry.

  18. Penicillamine prevents ram sperm agglutination in media that support capacitation.

    PubMed

    Leahy, T; Rickard, J P; Aitken, R J; de Graaf, S P

    2016-02-01

    Ram spermatozoa are difficult to capacitate in vitro. Here we describe a further complication, the unreported phenomenon of head-to-head agglutination of ram spermatozoa following dilution in the capacitation medium Tyrodes plus albumin, lactate and pyruvate (TALP). Sperm agglutination is immediate, specific and persistent and is not associated with a loss of motility. Agglutination impedes in vitro sperm handling and analysis. So the objectives of this study were to investigate the cause of sperm agglutination and potential agents which may reduce agglutination. The percentage of non-agglutinated, motile spermatozoa increased when bicarbonate was omitted from complete TALP suggesting that bicarbonate ions stimulate the agglutination process. d-penicillamine (PEN), a nucleophilic thiol, was highly effective at reducing agglutination. The inclusion of 250 μM PEN in TALP reduced the incidence of motile, agglutinated spermatozoa from 76.7 ± 2.7% to 2.8 ± 1.4%. It was then assessed if PEN (1 mM) could be included in existing ram sperm capacitation protocols (TALP +1 mM dibutyryl cAMP, caffeine and theophylline) to produce spermatozoa that were simultaneously capacitated and non-agglutinated. This protocol resulted in a sperm population which displayed high levels of tyrosine phosphorylated proteins and lipid disordered membranes (merocyanine-540) while remaining motile, viable, acrosome-intact and non-agglutinated. In summary, PEN (1 mM) can be included in ram sperm capacitation protocols to reduce sperm agglutination and allow for the in vitro assessment of ram sperm capacitation.

  19. Nitrogen isotopic signatures in agglutinates from breccia 79035

    NASA Technical Reports Server (NTRS)

    Kerridge, John F.; Kim, Yoosook; Kim, Jin S.; Marti, Kurt

    1993-01-01

    Agglutinates in the size range 125-175 microns from regolith breccia 79035 are substantially depleted in N compared with bulk 79035. Isotopically, agglutinate N closely resembles that found previously in ilmenite separates. The minimum (delta)N-15 value found during stepwise pyrolysis of agglutinates is significantly heavier than that observed for bulk 79035. The major host phase for trapped N in 79035, and the host phase of the lightest isotopic component(s), remain unidentified.

  20. The Classroom-Friendly ABO Blood Types Kit: Blood Agglutination Simulation

    ERIC Educational Resources Information Center

    Arnold, Savittree Rochanasmita; Kruatong, Tussatrin; Dahsah, Chanyah; Suwanjinda, Duongdearn

    2012-01-01

    The classroom-friendly ABO blood type kit was developed by combining advantages of modelling and a simulation laboratory to teach the topics of ABO blood types and blood transfusion. Teachers can easily simulate the agglutination reaction on a blood type testing plate in the classroom, and show the students how this reaction occurs by using the…

  1. Systems, devices, and methods for agglutination assays using sedimentation

    DOEpatents

    Schaff, Ulrich Y.; Sommer, Gregory J.; Singh, Anup K.

    2016-01-26

    Embodiments of the present invention include methods for conducting agglutination assays using sedimentation. Aggregates may be exposed to sedimentation forces and travel through a density medium to a detection area. Microfluidic devices, such as microfluidic disks, are described for conducting the agglutination assays, as are systems for conducting the assays.

  2. MEMS reagent and sample handling procedure: Feasibility of viral antibody detection by passive immune agglutination

    NASA Technical Reports Server (NTRS)

    Bailey, G. D.; Tenoso, H. J.

    1975-01-01

    An attempt was made to develop a test requiring no preadsorption steps for the assessment of antibodies to rubella and mumps viruses using the passive immune agglutination (PIA) method. Both rubella and mumps antigens and antibodies were prepared. Direct PIA tests, using rubella antigen-coated beads, and indirect PIA tests, using rubella antibody-coated beads, were investigated. Attempts, using either method, were unsuccessful. Serum interference along with nonspecific agglutination of beads by the rubella antigen resulted in no specific response under the test conditions investigated. A new, highly sensitive approach, the enzyme immunoassay (EIA) test system, is recommended to overcome the nonspecificity. This system is a logical outgrowth of some of the solid phase work done on MEMS and represents the next generation tests system that can be directly applied to early disease detection and monitoring.

  3. LAT Software Induced Savings on Medical Costs of Alcohol Addicts' Care - Results from a Matched-Pairs Case-Control Study

    PubMed Central

    Jakovljevic, Mihajlo; Jovanovic, Mirjana; Rancic, Nemanja; Vyssoki, Benjamin; Djordjevic, Natasa

    2014-01-01

    Lesch Alcoholism Typology (LAT) is one of the most widely used clinical typologies of alcohol addiction. Study tested whether introduction of LAT software in clinical practice leaded to improved outcomes and reduced costs. Retrospective matched-pairs case-control cost comparison study was conducted at the Regional Addiction Center of the University Clinic in Serbia involving 250 patients during the four-year period. Mean relapse frequency followed by outpatient detoxification was 0.42±0.90 vs. 0.70±1.66 (LAT/non-LAT; p = 0.267). Adding relapses after inpatient treatment total mean-number of relapses per patient was 0.70±1.74 vs. 0.97±1.89 (LAT/non-LAT; p = 0.201). However, these relapse frequency differentials were not statistically significant. Total hospital costs of Psychiatry clinic based non-LAT addicts' care (€54,660) were significantly reduced to €36,569 after initiation of LAT. Mean total cost per patient was reduced almost by half after initiation of LAT based treatment: €331±381 vs. €626±795 (LAT/non-LAT; p = 0.001). Mean cost of single psychiatry clinic admission among non-LAT treatment group was €320±330 (CI 95% 262–378) and among LAT €197±165 (CI 95% 168–226) (p = 0.019). Mean LAT software induced net savings on psychiatric care costs were €144 per patient. Total net savings on hospital care including F10 associated somatic co-morbidities amounted to €295 per patient. More sensitive diagnostic assessment and sub-type specific pharmacotherapy and psychotherapy following implementation of LAT software lead to significant savings on costs of hospital care. PMID:25379730

  4. LAT software induced savings on medical costs of alcohol addicts' care--results from a matched-pairs case-control study.

    PubMed

    Jakovljevic, Mihajlo; Jovanovic, Mirjana; Rancic, Nemanja; Vyssoki, Benjamin; Djordjevic, Natasa

    2014-01-01

    Lesch Alcoholism Typology (LAT) is one of the most widely used clinical typologies of alcohol addiction. Study tested whether introduction of LAT software in clinical practice leaded to improved outcomes and reduced costs. Retrospective matched-pairs case-control cost comparison study was conducted at the Regional Addiction Center of the University Clinic in Serbia involving 250 patients during the four-year period. Mean relapse frequency followed by outpatient detoxification was 0.42 ± 0.90 vs. 0.70 ± 1.66 (LAT/non-LAT; p = 0.267). Adding relapses after inpatient treatment total mean-number of relapses per patient was 0.70 ± 1.74 vs. 0.97 ± 1.89 (LAT/non-LAT; p = 0.201). However, these relapse frequency differentials were not statistically significant. Total hospital costs of Psychiatry clinic based non-LAT addicts' care (€ 54,660) were significantly reduced to € 36,569 after initiation of LAT. Mean total cost per patient was reduced almost by half after initiation of LAT based treatment: € 331 ± 381 vs. € 626 ± 795 (LAT/non-LAT; p = 0.001). Mean cost of single psychiatry clinic admission among non-LAT treatment group was € 320 ± 330 (CI 95% 262-378) and among LAT € 197 ± 165 (CI 95% 168-226) (p = 0.019). Mean LAT software induced net savings on psychiatric care costs were € 144 per patient. Total net savings on hospital care including F10 associated somatic co-morbidities amounted to € 295 per patient. More sensitive diagnostic assessment and sub-type specific pharmacotherapy and psychotherapy following implementation of LAT software lead to significant savings on costs of hospital care.

  5. Search for Spatially Extended Fermi-LAT Sources Using Two Years of Data

    SciTech Connect

    Lande, Joshua; Ackermann, Markus; Allafort, Alice; Ballet, Jean; Bechtol, Keith; Burnett, Toby; Cohen-Tanugi, Johann; Drlica-Wagner, Alex; Funk, Stefan; Giordano, Francesco; Grondin, Marie-Helene; Kerr, Matthew; Lemoine-Goumard, Marianne

    2012-07-13

    Spatial extension is an important characteristic for correctly associating {gamma}-ray-emitting sources with their counterparts at other wavelengths and for obtaining an unbiased model of their spectra. We present a new method for quantifying the spatial extension of sources detected by the Large Area Telescope (LAT), the primary science instrument on the Fermi Gamma-ray Space Telescope (Fermi). We perform a series of Monte Carlo simulations to validate this tool and calculate the LAT threshold for detecting the spatial extension of sources. We then test all sources in the second Fermi -LAT catalog (2FGL) for extension. We report the detection of seven new spatially extended sources.

  6. Enhancement of Leptospira hardjo agglutination titers in sheep and goat serum by heat inactivation.

    PubMed

    Malkin, K

    1984-04-01

    Heat inactivation of sheep serum samples resulted in the detection of an additional 9% reactors to Leptospira hardjo that were negative on the initial test of fresh samples. Treatment with EDTA gave results generally similar to heat inactivation suggesting that complement was responsible for the inhibition of agglutination. Tests on heat inactivated serum from experimentally infected sheep and goats revealed enhanced titers or reactions which were not detected in fresh serum.

  7. Prueba de Aptitud para el Aprendizaje de Lenguas Extranjeras (PAPALE) Language Aptitude Test (LAT) (First and Second Versions). English for Special Purposes. Emergency Care Attendant.

    ERIC Educational Resources Information Center

    Muro, Gertrude

    This book contains two versions of the Language Aptitude Test. It is part of a package of materials developed for use in an English for Special Purposes project, which offers classes in reading, grammar, and emergency care attendant training for limited English proficient students. Introductory material describes the parts of two versions and…

  8. Agglutination of human erythrocytes by the interaction of Zn(2+)ion with histidine-651 on the extracellular domain of band 3.

    PubMed

    Kiyotake, Kento; Ochiai, Hideharu; Yamaguchi, Takeo

    2016-05-01

    Clustering of band 3, chloride/bicarbonate exchanger, has been reported in Zn(2+)-treated human erythrocytes. However, the agglutination of human erythrocytes is also induced by the interaction of Zn(2+)ion with histidine on band 3. Identification of histidine that interacts with Zn(2+)ion remains to be determined. The Zn(2+)-induced agglutination of human erythrocytes was unaffected by chymotrypsin cleavage of the small loop region containing His-547 in the extracellular domain of band 3. On the other hand, papain digestion of the large loop region containing His-651 in band 3 inhibited such Zn(2+)-induced agglutination. Moreover, Zn(2+)-induced erythrocyte agglutination was inhibited by the peptide (ARGWVIHPLG) containing His-651, but not by the peptide such as ARGWVIRPLG, which His-651 was substituted by arginine. Among 10 kinds of animal erythrocytes tested, interestingly, no agglutination by Zn(2+)ions was observed in cow cells only that the forth amino acid in the upstream from His-669 on the large loop of cow band 3 is aspartate (Asp-665) instead of glycine. As expected, the agglutination of human erythrocytes by Zn(2+) ions was inhibited in the presence of aspartate. These data indicate that the interaction of Zn(2+) ion with His-651 residue of band 3 plays an important role in the Zn(2+)-induced agglutination of human erythrocytes.

  9. LAT1 activity of carboxylic acid bioisosteres: Evaluation of hydroxamic acids as substrates.

    PubMed

    Zur, Arik A; Chien, Huan-Chieh; Augustyn, Evan; Flint, Andrew; Heeren, Nathan; Finke, Karissa; Hernandez, Christopher; Hansen, Logan; Miller, Sydney; Lin, Lawrence; Giacomini, Kathleen M; Colas, Claire; Schlessinger, Avner; Thomas, Allen A

    2016-10-15

    Large neutral amino acid transporter 1 (LAT1) is a solute carrier protein located primarily in the blood-brain barrier (BBB) that offers the potential to deliver drugs to the brain. It is also up-regulated in cancer cells, as part of a tumor's increased metabolic demands. Previously, amino acid prodrugs have been shown to be transported by LAT1. Carboxylic acid bioisosteres may afford prodrugs with an altered physicochemical and pharmacokinetic profile than those derived from natural amino acids, allowing for higher brain or tumor levels of drug and/or lower toxicity. The effect of replacing phenylalanine's carboxylic acid with a tetrazole, acylsulfonamide and hydroxamic acid (HA) bioisostere was examined. Compounds were tested for their ability to be LAT1 substrates using both cis-inhibition and trans-stimulation cell assays. As HA-Phe demonstrated weak substrate activity, its structure-activity relationship (SAR) was further explored by synthesis and testing of HA derivatives of other LAT1 amino acid substrates (i.e., Tyr, Leu, Ile, and Met). The potential for a false positive in the trans-stimulation assay caused by parent amino acid was evaluated by conducting compound stability experiments for both HA-Leu and the corresponding methyl ester derivative. We concluded that HA's are transported by LAT1. In addition, our results lend support to a recent account that amino acid esters are LAT1 substrates, and that hydrogen bonding may be as important as charge for interaction with the transporter binding site.

  10. Automated Science Processing for GLAST LAT Data

    SciTech Connect

    Chiang, James

    2007-07-12

    Automated Science Processing (ASP) will be performed by the GLAST Large Area Telescope (LAT) Instrument Science Operations Center (ISOC) on data from the satellite as soon as the Level 1 data are available in the ground processing pipeline. ASP will consist of time-critical science analyses that will facilitate follow-up and multi-wavelength observations of transient sources. These analyses include refinement of gamma-ray burst (GRB) positions, timing, flux and spectral properties, off-line searches for untriggered GRBs and gamma-ray afterglows, longer time scale monitoring of a standard set of sources (AGNs, X-ray binaries), and searches for previously unknown flaring sources in the LAT band. We describe the design of ASP and its scientific products; and we show results of a prototype implementation, driven by the standard LAT data processing pipeline, as applied to simulated LAT and GBM data.

  11. Automated Science Processing for GLAST LAT Data

    SciTech Connect

    Chiang, James; Carson, Jennifer; Focke, Warren; /SLAC

    2007-10-15

    Automated Science Processing (ASP) will be performed by the GLAST Large Area Telescope (LAT) Instrument Science Operations Center (ISOC) on data from the satellite as soon as the Level 1 data are available in the ground processing pipeline. ASP will consist of time-critical science analyses that will facilitate follow-up and multi-wavelength observations of transient sources. These analyses include refinement of gamma-ray burst (GRB) positions, timing, flux and spectral properties, off-line searches for untriggered GRBs and gamma-ray afterglows, longer time scale monitoring of a standard set of sources (AGNs, X-ray binaries), and searches for previously unknown flaring sources in the LAT band. We describe the design of ASP and its scientific products; and we show results of a prototype implementation, driven by the standard LAT data processing pipeline, as applied to simulated LAT and GBM data.

  12. Comparison of agglutinating and neutralizing antibodies to serovar hardjo in sows immunized with two commercial whole culture polivalent anti-leptospira bacterins

    PubMed Central

    Soto, Francisco Rafael Martins; Pinheiro, Sônia Regina; Morais, Zenaide Maria; Gonçales, Amane Paldês; de Azevedo, Sérgio Santos; Bernardi, Fernanda; Camargo, Sebastião Rodrigues; Vasconcellos, Silvio Arruda

    2008-01-01

    It was performed the comparison of the intensity and duration of agglutinating and neutralizing antibodies to serovar Hardjo in swines vaccinated with two commercial anti-leptospira bacterins. Sows no reactive to 24 Leptospira sp serovars in the microscopic agglutination test (MAT) were divided in three groups: Group A (n=08): received two vaccine A doses with 30 days interval, Group B (n=08) two vaccine B doses with 30 days interval and Group C (n=08): control no vaccinated against leptospirosis.Blood samples were collected each 30 days during six months following the first vaccination. The sera were tested by MAT and growth inhibition test (GIT) to serovar Hardjo in order to evaluate respectively agglutinating and neutralizing antibodies. It was found that neutralizing antibodies persisted for a longer time than the agglutinating ones and that the absence of agglutinating antibodies does not means in the absence of the neutralizing. The peaks of agglutinating antibodies was obtained at least 30 days earlier than that produced by neutralizing. The duration of both kinds of antibodies measured differed between the two bacterines tested. The period for inducing neutralizing antibodies against serovar Hardjo indicated that gilts must be immunized with two doses of whole culture anti-leptospira bacterines applied 30 days each other at least 90 days before the first mating. For the maintenance of hight levels of neutralizing antibodies the revaccinations must be performed every six months after the first vaccination. PMID:24031250

  13. [Diagnostic value of agglutination reaction with buffered Brucella antigen stained with rose bengal].

    PubMed

    Chenchev, I; Khristoforov, L; Peshkov, I; Kostov, G; Mineva, I

    1978-01-01

    A specific buffered antigen has been obtained, employing a method developed by the authors, stained with Bengal rose and intended for performing a fast agglutination reaction to confirm brucellosis. The antigen produces a clear and demonstrative agglutination reaction with positive sera. Practically, the test is readily carried out, and can be made a routine both in every serologic laboratory and for investigations under field conditions. The reaction produced with this antigen can determine dependably the epizootic status on a farm or in the herd. The diagnostic value of the antigen is essential, especially with swine. Besides, it shows a wide a diagnostic scope for brucellosis with all species of animals (97--98 per cent).

  14. R and G color component competition of RGB image decomposition as a criterion to register RBC agglutinates for blood group typing.

    PubMed

    Doubrovski, Valeri A; Ganilova, Yuliya A; Zabenkov, Igor V

    2014-03-01

    A new approach of the criterion assignment for registration of erythrocyte agglutinates to instrumentally determine blood group type is suggested. The criterion is based on comparison of R and G components of RGB decomposition of microscopy digital image taken for the blood-serum mixture sample. For the chosen experimental conditions, the minimal size (area) of RBC agglutinate to be registered by the criterion suggested is estimated theoretically. The proposed method was tested experimentally on the example of monitoring agglutinates in flow. The encouraging experimental results were obtained for improvement of the resolving power of the method; the optimal experimental conditions were revealed for maximum resolution. Though the suggested method was realized for dynamic (flow) blood group determination, it could also be applied for diagnostics in a stationary environment. This approach increases the reliability of RBC agglutinates registration and, hence, blood group typing. The results may be used to develop the apparatus for automated determination of human blood group.

  15. Detection of Salmonella enterica serovar Enteritidis (SE) Antibodies in Serum Using A Polystyrene Bead/SE Flagella Agglutination Assay

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Serologic screening of flocks can be an important method to detect Salmonella enteritidis (SE) infections but can be labor intensive or lack specificity. Our goal was to develop a rapid agglutination assay using SE flagella adsorbed to polystyrene beads as a simple, relatively specific test to dete...

  16. Simplified spectraphotometric method for the detection of red blood cell agglutination.

    PubMed

    Ramasubramanian, Melur; Anthony, Steven; Lambert, Jeremy

    2008-08-01

    Human error is the most significant factor attributed to incompatible blood transfusions. A spectrophotometric approach to blood typing has been developed by examining the spectral slopes of dilute red blood cell (RBC) suspensions in saline, in the presence and absence of various antibodies, offering a technique for the quantitative determination of agglutination intensity [Transfusion39, 1051, 1999TRANAT0041-113210.1046/j.1537-2995.1999.39101051.x]. We offer direct theoretical prediction of the observed change in slope in the 660-1000 nm range through the use of the T-matrix approach and Lorenz-Mie theory for light scattering by dilute RBC suspensions. Following a numerical simulation using the T-matrix code, we present a simplified sensing method for detecting agglutination. The sensor design has been prototyped, fully characterized, and evaluated through a complete set of tests with over 60 RBC samples and compared with the full spectrophotometric method. The LED and photodiode pairs are found to successfully reproduce the spectroscopic determination of red blood cell agglutination.

  17. [Co-integration of BLG-LAtPA and WAP improved the expression of LAtPA in transgenic mouse milk].

    PubMed

    Zhou, J; Deng, J X; Cheng, X; Lu, Y F; Yang, X; Huang, P T

    2001-01-01

    In order to improve the expression of longer acting tissue plasminogen activator in the mammary epithelium of transgenic mice, the fragment of BLG-LAtPA hydrid gene was microinjected into mouse embryos with mice whey acid protein gene. Three mouse were tested as being Co-integration of BLG-LAtPA and WAP transgene by PCR and Southern blot. Milk obtained from lactating females contains biologically active tPA, and the concentration of tPA was calculated to be about 10 micrograms/mL.

  18. Evolution of Shock Melt Compositions in Lunar Agglutinates

    NASA Technical Reports Server (NTRS)

    Vance, A. M.; Christoffersen, R.; Keller, L. P.

    2015-01-01

    Lunar agglutinates are aggregates of regolith grains fused together in a glassy matrix of shock melt produced during smaller-scale (mostly micrometeorite) impacts. Agglutinate formation is a key space weathering process under which the optically-active component of nanophase metallic Fe (npFe(sup 0)) is added to the lunar regolith. Here we have used energy-dispersive X-ray (EDX) compositional spectrum imaging in the SEM to quantify the chemical homogeneity of agglutinitic glass, correlate its homogeneity to its parent soil maturity, and identify the principle chemical components contributing to the shock melt compositional variations.

  19. Fermi-LAT Observations of Galactic Transients

    NASA Technical Reports Server (NTRS)

    Hays, Elizabeth

    2011-01-01

    This slide presentation reviews the observations of Galactic transients by the Large Area Telescope (LAT) on the Fermi Gamma Ray Space Telescope. The LAT is producing spectacular results for the GeV transient sky, some of which are shown and reviewed. Some of the results in the GeV range that are discussed in this presentation are: (1) New blazars and unidentified transients (2) the jet of the Cygnus X-3 microquasar (3) gamma rays from V407 Cygni nova (4) Fast high-energy gamma-ray flares from the Crab Nebula

  20. Synthesis for Lunar Simulants: Glass, Agglutinate, Plagioclase, Breccia

    NASA Technical Reports Server (NTRS)

    Weinstein, Michael; Wilson, Stephen A.; Rickman, Douglas L.; Stoeser, Douglas

    2012-01-01

    The video describes a process for making glass for lunar regolith simulants that was developed from a patented glass-producing technology. Glass composition can be matched to simulant design and specification. Production of glass, pseudo agglutinates, plagioclase, and breccias is demonstrated. The system is capable of producing hundreds of kilograms of high quality glass and simulants per day.

  1. LATS2 Positively Regulates Polycomb Repressive Complex 2

    PubMed Central

    Torigata, Kosuke; Daisuke, Okuzaki; Mukai, Satomi; Hatanaka, Akira; Ohka, Fumiharu; Motooka, Daisuke; Nakamura, Shota; Ohkawa, Yasuyuki; Yabuta, Norikazu; Kondo, Yutaka; Nojima, Hiroshi

    2016-01-01

    LATS2, a pivotal Ser/Thr kinase of the Hippo pathway, plays important roles in many biological processes. LATS2 also function in Hippo-independent pathway, including mitosis, DNA damage response and epithelial to mesenchymal transition. However, the physiological relevance and molecular basis of these LATS2 functions remain obscure. To understand novel functions of LATS2, we constructed a LATS2 knockout HeLa-S3 cell line using TAL-effector nuclease (TALEN). Integrated omics profiling of this cell line revealed that LATS2 knockout caused genome-wide downregulation of Polycomb repressive complex 2 (PRC2) and H3K27me3. Cell-cycle analysis revealed that downregulation of PRC2 was not due to cell cycle aberrations caused by LATS2 knockout. Not LATS1, a homolog of LATS2, but LATS2 bound PRC2 on chromatin and phosphorylated it. LATS2 positively regulates histone methyltransferase activity of PRC2 and their expression at both the mRNA and protein levels. Our findings reveal a novel signal upstream of PRC2, and provide insight into the crucial role of LATS2 in coordinating the epigenome through regulation of PRC2. PMID:27434182

  2. Agglutinates as recorders of regolith evolution - Application to the Apollo 17 drill core

    SciTech Connect

    Laul, J.C.; Smith, M.R.

    1984-11-15

    Chemical data are reported for agglutinates from 26 depth intervals of the Apollo 17 deep drill core, and the compositions of the agglutinates are compared with those of the soils in which they occur. The agglutinate sequence suggests a scenario in which several closely-spaced depositional events were involved in the formation of the drill core, rather than a continuous accumulation process.

  3. Mononucleosis spot test

    MedlinePlus

    Monospot test; Heterophile antibody test; Heterophile agglutination test; Paul-Bunnell test; Forssman antibody test ... The mononucleosis spot test is done when symptoms of mononucleosis are ... Fatigue Fever Large spleen (possibly) Sore throat Tender ...

  4. Antibodies to spermatozoa. I. A new macroscopic agglutination technique for their detection, using immotile sperm

    PubMed Central

    Shulman, S.; Hekman, Annemarie

    1971-01-01

    An agglutination procedure, especially useful for guinea-pig sperm, has been developed. The preferred conditions are as follows: epididymal spermatozoa, in an immotile condition, unwashed or diluted and centrifuged once, at a concentration of 10×106 per ml diluted in phosphate-buffered saline, are incubated with antiserum samples in capillary tubes at 4°C for 1 or 2 hr of observation. This procedure has readily allowed us to detect the presence of antibodies against epididymal spermatozoa. The test has given results that are quite parallel to those obtained by the conventional Kibrick method. ImagesFig. 1Fig. 2 PMID:5570676

  5. The LAT story: a tale of cooperativity, coordination, and choreography.

    PubMed

    Balagopalan, Lakshmi; Coussens, Nathan P; Sherman, Eilon; Samelson, Lawrence E; Sommers, Connie L

    2010-08-01

    The adapter molecule LAT is a nucleating site for multiprotein signaling complexes that are vital for the function and differentiation of T cells. Extensive investigation of LAT in multiple experimental systems has led to an integrated understanding of the formation, composition, regulation, dynamic movement, and function of LAT-nucleated signaling complexes. This review discusses interactions of signaling molecules that bind directly or indirectly to LAT and the role of cooperativity in stabilizing LAT-nucleated signaling complexes. In addition, it focuses on how imaging studies visualize signaling assemblies as signaling clusters and demonstrate their dynamic nature and cellular fate. Finally, this review explores the function of LAT based on the interpretation of mouse models using various LAT mutants.

  6. GLAST LAT And Pulsars: What Do We Learn from Simulations?

    SciTech Connect

    Razzano, Massimiliano; Harding, Alice K.; /NASA, Goddard

    2007-10-24

    Gamma-ray pulsars are among the best targets for the Large Area Telescope (LAT) aboard the GLAST mission. The higher sensitivity, time and energy resolution of the LAT will provide data of fundamental importance to understand the physics of these fascinating objects. Powerful tools for studying the LAT capabilities for pulsar science are the simulation programs developed within the GLAST Collaboration. Thanks to these simulations it is possible to produce a detailed distribution of gamma-ray photons in energy and phase that can be folded through the LAT Instrument Response Functions (IRFs). Here we present some of the main interesting results from the simulations developed to study the discovery potential of the LAT. In particular we will focus on the capability of the LAT to discover new radio-loud gamma-ray pulsars, on the discrimination between Polar Cap and Outer Gap models, and on the LAT pulsar sensitivity.

  7. Decreased reactivation of a herpes simplex virus type 1 (HSV-1) latency associated transcript (LAT) mutant using the in vivo mouse UV-B model of induced reactivation

    PubMed Central

    BenMohamed, Lbachir; Osorio, Nelson; Srivastava, Ruchi; Khan, Arif A.; Simpson, Jennifer L.; Wechsler, Steven L.

    2015-01-01

    Blinding ocular herpetic disease in humans is due to herpes simplex virus type 1 (HSV-1) reactivations from latency, rather than to primary acute infection. The cellular and molecular mechanisms that control the HSV-1 latency-reactivation cycle remain to be fully elucidated. The aim of this study was to determine if reactivation of the HSV-1 latency associated transcript (LAT) deletion mutant (dLAT2903) was impaired in this model, as it is in the rabbit model of induced and spontaneous reactivation and in the explant TG induced reactivation model in mice. The eyes of mice latently infected with wild type HSV-1 strain McKrae (LAT(+) virus) or dLAT2903 (LAT(−) virus) were irradiated with UV-B and reactivation was determined. We found that compared to LAT(−) virus, LAT(+) virus reactivated at a higher rate as determined by shedding of virus in tears on days 3 to 7 after UV-B treatment. Thus, the UV-B induced reactivation model of HSV-1 appears to be a useful small animal model for studying the mechanisms involved in how LAT enhances the HSV-1 reactivation phenotype. The utility of the model for investigating the immune evasion mechanisms regulating the HSV-1 latency/reactivation cycle and for testing the protective efficacy of candidate therapeutic vaccines and drugs are discussed. PMID:26002839

  8. FERMI-LAT Observations of Galatic Transients

    NASA Technical Reports Server (NTRS)

    Hays, Elizabeth

    2010-01-01

    This slide presentation reviews the use of the Large Area Telescope on the Fermi Observatory observations of Galactic Transients. LAT all-sky monitoring is producing spectacular results for the GeV transient sky: (1) New blazars and unidentified transients (2) Probing the jet of the Cygnus X-3 microquasar (3) Discovery of gamma rays from V407 Cygni nova (4) Fast high-energy gamma-ray flares from the Crab Nebula.

  9. Pulsar Timing with the Fermi LAT

    DTIC Science & Technology

    2010-12-01

    Pulsar Timing with the Fermi LAT Paul S. Ray∗, Matthew Kerr†, Damien Parent∗∗ and the Fermi PSC‡ ∗Naval Research Laboratory, 4555 Overlook Ave., SW...Laboratory, Washington, DC 20375, USA ‡Fermi Pulsar Search Consortium Abstract. We present an overview of precise pulsar timing using data from the Large...unbinned photon data. In addition to determining the spindown behavior of the pulsars and detecting glitches and timing noise, such timing analyses al

  10. [LAT (linker for activation of T cells): a useful marker for megakaryocyte evaluation on bone marrow biopsies].

    PubMed

    Ungari, M; Pellegrini, W; Borlenghi, E; Marocolo, D; Ubiali, A; Agazzi, C; Pich, A; Franco, V; Facchetti, F

    2002-12-01

    Detection of atypical megakaryocytes in bone marrow biopsies, especially in cases of myelodysplastic syndromes (MDS), chronic myeloproliferative disorders (CMPD) and acute leukemias, is facilitated by staining for markers such as Ulex europaeus agglutinin (UEA)-J, CD31, CD61 and von Willebrand factor (VWF), the latter being considered the most sensitive. Recently, LAT (linker for activation of T cells), a molecule involved in T-cell activation and platelet aggregation, was found to be expressed by megakaryocytes and platelets in tissue sections. We compared VWF and LAT immunoreactivity on megakaryocytes in 64 bone marrow biopsies from 12 normal controls (NC), and from patients with MDS (n=18), CMPD (n=21) and acute megakaryocytic leukemia (AML-M7, n=13). Immunostaining was performed on paraffin sections with polyclonal antibodies against VWF and LAT. Immunoreactivity was evaluated by counting positive megakaryocytes in 10 high-power fields, and values were compared using Student's t test for paired data. Both VWF and LAT predominantly stained the cytoplasm of megakaryocytes, although LAT was also recognizable on the cell membrane. In most biopsies, the immunoreactivity of the two antibodies was quite similar. No significant differences were noticed between the mean values of VWF+ and LAT+ megakaryocytes. However, in 22 cases (5 NC; 5 MDS; 6 CMPD; 6 AML-M7), the number of LAT+ megakaryocytes was at least 30% higher than VWF+cells, while in 3 cases opposite findings were found. In 3 AML-M7 cases, anti-LAT antibodies stained numerous megakaryocytes, but anti-VWF staining was practically negative; in another 5 AML-M7 cases, anti-LAT labeling was much stronger than anti-VWF staining. LAT represents a useful immunohistochemical marker for megakaryocytes in normal and pathological conditions. It seems to be expressed by megakaryocytes more than VWF in most cases and, particularly, in conditions associated with poorly differentiated megakaryocytes, such as acute

  11. Measurement of RBC agglutination with microscopic cell image analysis in a microchannel chip.

    PubMed

    Cho, Chi Hyun; Kim, Ju Yeon; Nyeck, Agnes E; Lim, Chae Seung; Hur, Dae Sung; Chung, Chanil; Chang, Jun Keun; An, Seong Soo A; Shin, Sehyun

    2014-01-01

    Since Landsteiner's discovery of ABO blood groups, RBC agglutination has been one of the most important immunohematologic techniques for ABO and RhD blood groupings. The conventional RBC agglutination grading system for RhD blood typings relies on macroscopic reading, followed by the assignment of a grade ranging from (-) to (4+) to the degree of red blood cells clumping. However, with the new scoring method introduced in this report, microscopically captured cell images of agglutinated RBCs, placed in a microchannel chip, are used for analysis. Indeed, the cell images' pixel number first allows the differentiation of agglutinated and non-agglutinated red blood cells. Finally, the ratio of agglutinated RBCs per total RBC counts (CRAT) from 90 captured images is then calculated. During the trial, it was observed that the agglutinated group's CRAT was significantly higher (3.77-0.003) than that of the normal control (0). Based on these facts, it was established that the microchannel method was more suitable for the discrimination between agglutinated RBCs and non-agglutinated RhD negative, and thus more reliable for the grading of RBCs agglutination than the conventional method.

  12. LatMix 2011 and 2012 Dispersion Analysis

    DTIC Science & Technology

    2015-09-30

    1 DISTRIBUTION STATEMENT A. Approved for public release; distribution is unlimited. LatMix 2011 and 2012 Dispersion Analysis Miles A...continue analysis and publication of results obtained during the “Scalable Lateral Mixing and Coherent Turbulence” (a.k.a., LatMix) DRI. The initial...work included the airborne lidar operations as well as a substantial part of the field operations and analysis . A primary objective of our LatMix

  13. Amyloidogenic amyloid-β-peptide variants induce microbial agglutination and exert antimicrobial activity

    PubMed Central

    Spitzer, Philipp; Condic, Mateja; Herrmann, Martin; Oberstein, Timo Jan; Scharin-Mehlmann, Marina; Gilbert, Daniel F.; Friedrich, Oliver; Grömer, Teja; Kornhuber, Johannes; Lang, Roland; Maler, Juan Manuel

    2016-01-01

    Amyloid-β (Aβ) peptides are the main components of the plaques found in the brains of patients with Alzheimer’s disease. However, Aβ peptides are also detectable in secretory compartments and peripheral blood contains a complex mixture of more than 40 different modified and/or N- and C-terminally truncated Aβ peptides. Recently, anti-infective properties of Aβ peptides have been reported. Here, we investigated the interaction of Aβ peptides of different lengths with various bacterial strains and the yeast Candida albicans. The amyloidogenic peptides Aβ1-42, Aβ2-42, and Aβ3p-42 but not the non-amyloidogenic peptides Aβ1-40 and Aβ2-40 bound to microbial surfaces. As observed by immunocytochemistry, scanning electron microscopy and Gram staining, treatment of several bacterial strains and Candida albicans with Aβ peptide variants ending at position 42 (Aβx-42) caused the formation of large agglutinates. These aggregates were not detected after incubation with Aβx-40. Furthermore, Aβx-42 exerted an antimicrobial activity on all tested pathogens, killing up to 80% of microorganisms within 6 h. Aβ1-40 only had a moderate antimicrobial activity against C. albicans. Agglutination of Aβ1-42 was accelerated in the presence of microorganisms. These data demonstrate that the amyloidogenic Aβx-42 variants have antimicrobial activity and may therefore act as antimicrobial peptides in the immune system. PMID:27624303

  14. Prevalence of agglutinating antibodies to Toxoplasma gondii and Sarcocystis neurona in beavers (Castor canadensis) from Massachusetts.

    PubMed

    Jordan, Carly N; Kaur, Taranjit; Koenen, Kiana; DeStefano, Stephen; Zajac, Anne M; Lindsay, David S

    2005-10-01

    The present study examined the seroprevalence of Toxoplasma gondii and Sarcocystis neurona in a population of beavers (Castor canadensis) from Massachusetts. Sixty-two blood samples were collected during the field seasons over 3 consecutive years from different animals. Blood was collected onto filter paper and shipped to the Department of Biomedical Sciences, Virginia Tech, Blacksburg, Virginia, for parasite testing. The samples were tested at dilutions of 1:25, 1:50, and 1:100 against each parasite antigen by modified agglutination tests to determine whether antibodies to either parasite were present in the blood. Six of 62 samples (10%) were positive for T. gondii, with 2 samples having titers of 1:25 and 4 having titers of 1:50. Four of 62 samples (6%) were positive for S. neurona, with 2 samples having titers of 1:25 and 2 having titers of 1:50.

  15. Prevalence of agglutinating antibodies to Toxoplasma gondii and Sarcocystis neurona in beavers (Castor canadensis) from Massachusetts

    USGS Publications Warehouse

    Jordan, C.N.; Kaur, T.; Koenen, K.; DeStefano, S.; Zajac, A.M.; Lindsay, D.S.

    2005-01-01

    The present study examined the seroprevalence of Toxoplasma gondii and Sarcocystls neurona in a population of beavers (Castor canadensis) from Massachusetts. Sixty-two blood samples were collected during the field seasons over 3 consecutive years from different animals. Blood was collected onto filter paper and shipped to the Department of Biomedical Sciences, Virginia Tech, Blacksburg, Virginia, for parasite testing. The samples were tested at dilutions of 1:25, 1:50, and 1:100 against each parasite antigen by modified agglutination tests to determine whether antibodies to either parasite were present in the blood. Six of 62 samples (10%) were positive for T. gondii, with 2 samples having titers of 1:25 and 4 having titers of 1:50. Four of 62 samples (6%) were positive for S. neurona, with 2 samples having titers of 1:25 and 2 having titers of 1:50. ?? American Society of Pathologists 2005.

  16. Agglutination of human O erythrocytes by influenza A(H1N1) viruses freshly isolated from patients.

    PubMed

    Murakami, T; Haruki, K; Seto, Y; Kimura, T; Minoshiro, S; Shibe, K

    1991-04-01

    The hemagglutinin titers of 10 influenza A (H1N1) viruses were examined using the erythrocytes of several species. Human O erythrocytes showed the highest agglutination titer to the viruses, whereas chicken erythrocytes showed a low titer. These findings were noted for at least 10 passages by serial dilutions of the viruses in Madin-Darby canine kidney (MDCK) cells. All influenza A(H1N1) viruses, plaque-cloned directly from throat-washing specimens of patients, also agglutinated human O but not chicken erythrocytes. The results of a hemadsorption test indicated that chicken erythrocytes possess less affinity to MDCK cells infected with the A/Osaka City/2/88(H1N1) stain than to those infected with the A/Yamagata/120/86(H1N1) strain which is used as an inactivated influenza vaccine in Japan. However, there were no significant differences between the A/Osaka City/2/88 and the A/Yamagata/120/86 strains in the hemagglutination inhibition test. Since human O erythrocytes have high agglutination activity to influenza A(H1N1) and also to A(H3N2) and B viruses in MDCK cells, these erythrocytes may be useful for the serological diagnosis of influenza.

  17. Formation of agglutinate-like particles in an experimental regolith

    NASA Technical Reports Server (NTRS)

    See, Thomas H.; Horz, Friedrich

    1988-01-01

    Agglutinate-like particles composed predominantly of glass were produced from a fragmental gabbro target that was repetitively impacted by Ni-alloy projectiles. The experimental glasses are much more heterogeneous in composition than their lunar counterparts, and they are dominated by incomplete mixing of melted component minerals and by plagioclase-rich compositions. Most of the particles are found to be highly enriched in feldspar and to be sustantially fractionated relative to the initial bulk target. It is suggested that fractionation trends within lunar agglutinitic glasses may be partly due to phase-specific melting.

  18. The Nature of the Most Extreme Cosmic Explosions: Broadband Studies of Fermi LAT GRB Afterglows

    NASA Astrophysics Data System (ADS)

    Kidd, Lauren; Troja, E.

    2014-01-01

    In the five years since its launch, the Fermi Large Area Telescope (LAT) has revealed a population of gamma-ray bursts (GRBs) that are among the most energetic explosions ever observed. While typical GRB afterglows are observed from radio to X-rays, afterglows of Fermi LAT GRBs are detected up to GeV energies, challenging our understanding of GRB emission mechanisms and central engines. There are now a significant number of LAT-detected GRBs with multi-wavelength afterglow data and measured redshifts that allow us to investigate potential correlations between this high-energy (> 100 MeV) emission and the afterglow parameters and determine if any particular conditions (e.g., weak magnetic field or low density medium) must be met by the progenitor system in order to generate the bright GeV emission. We developed an afterglow fitting code to model and fit the broadband afterglow data in counts space, allowing us to directly test the model predictions on the observed data. The uncertainties in our results were derived using a Markov Chain Monte Carlo analysis, which allows us to uncover degeneracies between the physical parameters of the explosion. Here we present the preliminary results of our study of the population of Fermi LAT-detected GRBs.

  19. A comparison of tests for thyroglobulin antibody

    PubMed Central

    Rawstron, J. R.; Farthing, C. P.

    1962-01-01

    A comparison is made of tests for thyroglobulin antibody, using gel diffusion, electroprecipitin, bentonite flocculation, tanned red cell agglutination, and latex slide agglutination techniques on sera from cases of Hashimoto's disease and other thyroid disorders. Any increase in γ globulin was also noted from the serum electrophoretic pattern. The gel diffusion and electroprecipitin tests are shown to be comparable in their sensitivity, as are the bentonite flocculation and tanned red cell agglutination tests. The flocculation and agglutination tests were oversensitive. The latex slide test in conjunction with the electro-precipitin test is recommended for routine use in the detection of Hashimoto's disease. Images PMID:14490690

  20. Quantitative determination of fibrinogen of patients with coronary heart diseases through piezoelectric agglutination sensor.

    PubMed

    Chen, Qinghai; Hua, Xing; Fu, Weiling; Liu, Dongbo; Chen, Ming; Cai, Guoru

    2010-01-01

    Fibrinogen can transform fibrin through an agglutination reaction, finally forming fibrin polymer with grid structure. The density and viscosity of the reaction system changes drastically during the course of agglutination. In this research, we apply an independently-developed piezoelectric agglutination sensor to detect the fibrinogen agglutination reaction in patients with coronary heart diseases. The terminal judgment method of determining plasma agglutination reaction through piezoelectric agglutination sensor was established. In addition, the standard curve between plasma agglutination time and fibrinogen concentration was established to determinate fibrinogen content quantitatively. The results indicate the close correlation between the STAGO paramagnetic particle method and the method of piezoelectric agglutination sensor for the detection of Fibrinogen. The correlation coefficient was 0.91 (γ = 0.91). The determination can be completed within 10 minutes. The fibrinogen concentration in the coronary heart disease group was significantly higher than that of the healthy control group (P < 0.05). The results reveal that high fibrinogen concentration is closely correlated to the incurrence, development and prognosis of coronary heart diseases. Compared with other traditional methods, the method of piezoelectric agglutination sensor has some merits such as operation convenience, small size, low cost, quick detecting, good precision and the common reacting agents with paramagnetic particle method.

  1. The interaction of antigen and antibody in agglutination

    PubMed Central

    Elek, S. D.; Smith, B. V. Kingsley; Highman, Wilma

    1964-01-01

    Flagellar fragments are thin cylinders that are particularly suitable for the study of agglutination by electron microscopy. Their shape leads to a characteristic pattern of agglutination and thus the early stages can be studied. Measurement of interflagellar distances under conditions of negative staining, suggest that the minimum length of the rabbit antibody molecules is about 180 Å. The molecules carry the specific sites at the ends of the long axis, and become attached radially to the surface of the flagella, resembling the bristles of a bottle-brush. To explain this orientation it is postulated that the antibody is inserted into the surface of the flagellum in such a manner that surrounding molecules give it a fixed direction. Geometrically this hypothesis corresponds to an insertion into pits. Pepsin-treated (5S) rabbit antibody behaves in a like manner, but the molecule appears to be shorter. No information could be obtained about the thickness and actual shape of antibody molecules by the techniques employed. ImagesFIG. 1FIG. 2FIG. 3FIG. 4FIG. 5FIG. 6FIG. 9FIG. 11FIG. 13FIG. 14FIG. 15 PMID:14210767

  2. Development of a slide agglutination assay for detection of blastomycosis.

    PubMed

    Hatch, Wayne O; Scalarone, Gene M

    2013-11-01

    Blastomycosis, caused by the thermally dimorphic fungus Blastomyces dermatitides, which is endemic to eastern regions of the USA, is commonly misdiagnosed as a viral or bacterial infection and therefore treated improperly. Over the years, many immunodiagnostic assays to aid in the diagnosis of blastomycosis have been developed; however, a reliable assay for use in local clinics still remains elusive. Procedures for a slide agglutination assay for detection of antibody in serum from rabbits immunized with B. dermatitidis were evaluated with antigenic preparations from B. dermatitidis adsorbed to polystyrene microparticles. Yeast-phase lysates from five isolates of B. dermatitides: namely ER-593 (Eagle River, WI, USA), ER-598 (Eagle River, WI, USA), 48938 (India), B5896 (Mt. Iron, MN, USA), and T-58 (TN, USA) were evaluated for their sensitivity and specificity. Sensitivities of the lysates ranged from 29% to 83% whereas specificities ranged from 13% to 100%. Lysate ER-593 provided the most promising results with a sensitivity of 82% and specificity of 100%. This study provides suggests that a simple rapid slide agglutination assay for detecting blastomycosis may be used for screening patients with suspected B. dermatitidis infection.

  3. LAT Observation of GRBs: Simulations and Sensitivity Studies

    SciTech Connect

    Omodei, Nicola; Norris, Jay; /Denver U.

    2007-10-22

    The GLAST Large Area Telescope (LAT) is the next generation satellite experiment for high-energy gamma-ray astronomy. It employs a pair conversion technique to record photons in the energy range from 20 MeV to more than 300 GeV. The LAT will follow the steps from its predecessor EGRET (1991-2000), and will explore the high-energy gamma-ray sky with unprecedented capabilities. The observation of Gamma-Ray Bursts is one of the main science goal of the LAT: in this contribution we compute an estimation of the LAT sensitivity to GRB, adopting a phenomenological description of GRBs, where the high-energy emission in GRB is obtained extrapolating the observed BATSE spectrum up to LAT energies. The effect of the cosmological attenuation is included. We use the BATSE current catalog to build up our statistics.

  4. The Capabilities of the GLAST LAT for Blazar Variability Studies

    NASA Technical Reports Server (NTRS)

    McEnery, Julie

    2008-01-01

    One of the more notable features of the Large Area Telescope (LAT) on GLAST is its extremely large field of view, which covers more than 20% of the sky at any instant. In survey mode the LAT will be rocked about the orbital plane to provide coverage of the entire gamma-ray sky above 20 MeV every three hours. This will be the default observing mode for the first year of operations and is likely to be the dominant observing mode throughout the rest of the mission. Thus the LAT will provide long, evenly sampled, gamma-ray lightcurves for a large number of sources. In this talk we describe the nature and quality of the data that will be provided by the LAT and use simulated lightcurves to illustrate some of the scientific questions that can be addressed with LAT observations.

  5. LAT observation of GRBs: Simulations and Sensitivity studies

    SciTech Connect

    Omodei, Nicola; Norris, Jay

    2007-07-12

    The GLAST Large Area Telescope (LAT) is the next generation satellite experiment for high-energy gamma-ray astronomy. It employs a pair conversion technique to record photons in the energy range from 20 MeV to more than 300 GeV. The LAT will follow the steps from its predecessor EGRET (1991-2000), and will explore the high-energy gamma-ray sky with unprecedented capabilities. The observation of Gamma-Ray Bursts is one of the main science goal of the LAT: in this contribution we compute an estimation of the LAT sensitivity to GRB, adopting a phenomenological description of GRBs, where the high-energy emission in GRB is obtained extrapolating the observed BATSE spectrum up to LAT energies. The effect of the cosmological attenuation is included. We use the BATSE current catalog to build up our statistics.

  6. Studying red blood cell agglutination by measuring electrical and mechanical properties with a double optical tweezers

    NASA Astrophysics Data System (ADS)

    Fontes, Adriana; Fernandes, Heloise P.; de Thomaz, André A.; Barbosa, Luiz C.; Barjas-Castro, Maria L.; Cesar, Carlos L.

    2007-07-01

    The red blood cell (RBC) viscoelastic membrane contains proteins and glycolproteins embedded in, or attached, to a fluid lipid bilayer and are negatively charged, which creates a repulsive electric (zeta) potential between the cells and prevents their aggregation in the blood stream. The basis of the immunohematologic tests is the interaction between antigens and antibodies that causes hemagglutination. The identification of antibodies and antigens is of fundamental importance for the transfusional routine. This agglutination is induced by decreasing the zeta-potential through the introduction of artificial potential substances. This report proposes the use of the optical tweezers to measure the membrane viscosity, the cell adhesion, the zeta-potential and the size of the double layer of charges (CLC) formed around the cell in an electrolytic solution. The adhesion was quantified by slowly displacing two RBCs apart until the disagglutination. The CLC was measured using the force on the bead attached to a single RBC in response to an applied voltage. The zeta-potential was obtained by measuring the terminal velocity after releasing the RBC from the optical trap at the last applied voltage. For the membrane viscosity experiment, we trapped a bead attached to RBCs and measured the force to slide one RBC over the other as a function of the relative velocity. After we tested the methodology, we performed measurements using antibody and potential substances. We observed that this experiment can provide information about cell agglutination that helps to improve the tests usually performed in blood banks. We also believe that this methodology can be applied for measurements of zeta-potentials in other kind of samples.

  7. An experimental investigation of agglutinate melting mechanisms - Shocked mixtures of sodium and potassium feldspars

    NASA Technical Reports Server (NTRS)

    Simon, S. B.; Papike, J. J.; Horz, F.; See, T. H.

    1985-01-01

    The results of an experiment designed to test the validity of the model for agglutinate formation involving fusion of the finest fraction or F3 are reported. Impact glasses were formed from various mixes of orthoclase and albite powders, which were used as analogs for soils with chemically constrasting coarse and fine fractions. The results showed that the single most important factor displacing the composition of a small-scale impact melt from the bulk composition of the source regolith is the fractionated composition of the finest soil fraction. Volatile loss and the amount of melting, which in turn are determined by the degree of shock, are also important. As predicted by the model, the lower pressure melts are the most fractionated, and higher pressure is accompanied by increased melting causing glass compositions to approach the bulk. In general, the systematics predicted by the model are observed; the model appears to be valid.

  8. [Identification of mosquitoes' human food source by using the co-agglutination technique].

    PubMed

    Castex, M; Fachado, A; Fonte, L

    1997-01-01

    The utilization of a coagglutination technique for the identification of a human source for feeding mosquitoes is described. The dilution of ingested blood samples in filter paper was performed in 2 mL of a sodium chloride solution at 0.85%. It was used a suspension of sensibilized Staphylococcus aureus with rabbit's serum, human plasmatic anti-proteins, and human anti-IgG rabbit's serum discriminated well between human and non human blood. No agglutination was observed with the negative control. This technique proved to be sensitive to identify 100% of the human blood samples taken to the paper 24 hours after the mosquitoes completed their feeding at a temperature of 26 to 28 degrees C. Among mosquitoes fed and collected in the fields the test had a satisfactory result. Therefore, it may be used in routine work in the fields. The results showed the sensitivity and specificity of this method for identifying human blood ingested by mosquitoes.

  9. A novel flow cytometry-based assay for the quantification of antibody-dependent pneumococcal agglutination

    PubMed Central

    van der Gaast—de Jongh, Christa E.; Diavatopoulos, Dimitri A.; de Jonge, Marien I.

    2017-01-01

    The respiratory pathogen Streptococcus pneumoniae is a major cause of diseases such as otitis media, pneumonia, sepsis and meningitis. The first step towards infection is colonization of the nasopharynx. Recently, it was shown that agglutinating antibodies play an important role in the prevention of mucosal colonization with S. pneumoniae. Here, we present a novel method to quantify antibody-dependent pneumococcal agglutination in a high-throughput manner using flow cytometry. We found that the concentration of agglutinating antibodies against pneumococcal capsule are directly correlated with changes in the size and complexity of bacterial aggregates, as measured by flow cytometry and confirmed by light microscopy. Using the increase in size, we determined the agglutination index. The cutoff value was set by measuring a series of non-agglutinating antibodies. With this method, we show that not only anti-polysaccharide capsule antibodies are able to induce agglutination but that also anti-PspA protein antibodies have agglutinating capabilities. In conclusion, we have described and validated a novel method to quantify pneumococcal agglutination, which can be used to screen sera from murine or human vaccination studies, in a high-throughput manner. PMID:28288168

  10. An early Cambrian agglutinated tubular lophophorate with brachiopod characters

    PubMed Central

    Zhang, Z.-F.; Li, G.-X.; Holmer, L. E.; Brock, G. A.; Balthasar, U.; Skovsted, C. B.; Fu, D.-J.; Zhang, X.-L.; Wang, H.-Z.; Butler, A.; Zhang, Z.-L.; Cao, C.-Q.; Han, J.; Liu, J.-N.; Shu, D.-G.

    2014-01-01

    The morphological disparity of lophotrochozoan phyla makes it difficult to predict the morphology of the last common ancestor. Only fossils of stem groups can help discover the morphological transitions that occurred along the roots of these phyla. Here, we describe a tubular fossil Yuganotheca elegans gen. et sp. nov. from the Cambrian (Stage 3) Chengjiang Lagerstätte (Yunnan, China) that exhibits an unusual combination of phoronid, brachiopod and tommotiid (Cambrian problematica) characters, notably a pair of agglutinated valves, enclosing a horseshoe-shaped lophophore, supported by a lower bipartite tubular attachment structure with a long pedicle with coelomic space. The terminal bulb of the pedicle provided anchorage in soft sediment. The discovery has important implications for the early evolution of lophotrochozoans, suggesting rooting of brachiopods into the sessile lophotrochozoans and the origination of their bivalved bauplan preceding the biomineralization of shell valves in crown brachiopods. PMID:24828016

  11. Human blood group typing based on digital photographs of RBC agglutination process

    NASA Astrophysics Data System (ADS)

    Doubrovski, V. A.; Dolmashkin, A. A.

    2010-08-01

    A method for the monitoring of the human erythrocyte agglutination reaction in vitro, which is the basis for determining the human blood type (group), is proposed. The method is based on a statistical analysis of digital photographs of the agglutination process. It is experimentally shown that this analysis of photographs makes it possible to determine the probability that the agglutination reaction of erythrocytes of the studied specimen of blood with corresponding isohemagglutinating sera does occur. To increase the rate of the agglutination reaction of erythrocytes and to improve the sensitivity of the method of monitoring, the bioobject under study is subjected to the action of ultrasonic waves, as was previously proposed by the authors, and the result of the erythrocyte agglutination reaction is read optically. It is shown that, in principle, the method of statistical processing of digital photographs can be used to develop devices for automatic human blood typing in the AB0 and Rh systems.

  12. Sperm-agglutinating antibodies and testicular morphology in fifty-nine men with azoospermia or cryptozoospermia.

    PubMed

    Friberg, J; Kjessler, B

    1975-04-01

    The relationship between the state of the germinal epithelium and the type and titer of circulating sperm-agglutinating antibodies has been investigated in a series of 59 azoospermic or occasionally cryptozoospermic men. The patients were grouped according to the condition of the germinal epithelium as observed from testicular biopsy specimens, as well as to type and titer of circulating sperm-agglutinating antibodies investigated by a previously described microagglutination technique. Evidence is presented to suggest that the presence of mature spermatozoa in the testicular structures may be a prerequisite for the spontaneous production of circulating sperm-agglutinating antibodies, at least of the head-to-tail (H-T) agglutinating type. Furthermore, these circulating H-T sperm-agglutinating antibodies, once they are formed, do not seem to interfere adversely with the germinal epithelium of the carrier.

  13. Pushing the Limits: High Redshift Fermi-LAT Blazars

    NASA Astrophysics Data System (ADS)

    Ojha, Roopesh; Gasparrini, Dario; Lott, Benoit; Cutini, Sara; Fermi-LAT Collaboration

    2016-01-01

    High-redshift blazars detected by the Fermi Large Area Telescope (LAT) are of great astrophysical import as they are extreme objects whose energetics remain a mystery. Such blazars are intrinsically interesting since they inform us about the evolution of gamma-ray blazars and are, by definition, some of the more luminous blazars in the LAT sample. They are also an excellent tool to study the EBL and thus the gamma-ray horizon. We present the latest high redshift blazar detections in the LAT and discuss some of their implications.

  14. Fermi LAT Observations of Cosmic-Ray Electrons

    NASA Technical Reports Server (NTRS)

    Moiseev, Alexander

    2011-01-01

    Designed as a gamma-ray instrument, the LAT is a capable detector of high energy cosmic ray electrons. The LAT is composed of a 4x4 array of identical towers. Each tower has a Tracker and a Calorimeter module. Entire LAT is covered by segmented Anti-Coincidence Detector (ACD). The electron data analysis is based on that developed for photons. The main challenge is to identify and separate electrons from all other charged species, mainly CR protons (for gamma-ray analysis this is provided by the Anti-Coincidence Detector)

  15. Red blood cell membrane viscoelasticity, agglutination and zeta potential measurements with double optical tweezers

    NASA Astrophysics Data System (ADS)

    Fontes, Adriana; Fernandes, Heloise P.; Barjas-Castro, Maria L.; de Thomaz, André A.; de Ysasa Pozzo, Liliana; Barbosa, Luiz C.; Cesar, Carlos L.

    2006-02-01

    The red blood cell (RBC) viscoelastic membrane contains proteins and glycolproteins embedded in, or attached, to a fluid lipid bilayer and are negatively charged, which creates a repulsive electric (zeta) potential between the cells and prevents their aggregation in the blood stream. There are techniques, however, to decrease the zeta potential to allow cell agglutination which are the basis of most of the tests of antigen-antibody interactions in blood banks. This report shows the use of a double optical tweezers to measure RBC membrane viscosity, agglutination and zeta potential. In our technique one of the optical tweezers trap a silica bead that binds strongly to a RBC at the end of a RBCs rouleaux and, at the same time, acts as a pico-Newton force transducer, after calibration through its displacement from the equilibrium position. The other optical tweezers trap the RBC at the other end. To measure the membrane viscosity the optical force is measured as a function of the velocity between the RBCs. To measure the adhesion the tweezers are slowly displaced apart until the RBCs disagglutination happens. The RBC zeta potential is measured in two complimentary ways, by the force on the silica bead attached to a single RBC in response to an applied electric field, and the conventional way, by the measurement of terminal velocity of the RBC after released from the optical trap. These two measurements provide information about the RBC charges and, also, electrolytic solution properties. We believe this can improve the methods of diagnosis in blood banks.

  16. Limited Toxicity and Mutagenicity Testing of Five Unicharge Propellant Compounds.

    DTIC Science & Technology

    1992-01-31

    LAT, Kim DiLeo, B.S., LAT Performance: and Shirley Chappuis, A.S., AVT, LAT O.A.U. Responsible Personnel: Leslie J. Pinnell , M.S. Date Study Director...US-001, 002-91 METHODS Rationale for Test System: As per sponsor’s request Compound With the exception of the 5000 mg/kg dose Preparation: levels, the

  17. Laser-assisted tympanostomy (LAT) in adult individuals

    NASA Astrophysics Data System (ADS)

    Prokopakis, E. P.; Lachanas, V. A.; Helidonis, Emmanuel S.; Velegrakis, G.

    2004-06-01

    Objectives: To assess outcome, in adult individuals undergone Laser Assisted Tympanostomy (LAT) without ventilation tube placement. Method: LAT was performed on a total of 95 ears (72 individuals). Indications included serous otitis media with effusion (44 ears/31 patients), eustachian tube dysfunction (32 ears/24 patients), acute otitis media (13 ears/11 patients), and endoscopic visualization of the middle ear (6 ears/6 patients). Results: Middle ear disease was resolved after the closure of tympanostomy in 48% of patients with serous otitis media with effusion. In 78% of patients with Eustachian tube dysfunction symptoms were diminished. All patients with acute otitis media had a satisfactory outcome. LAT was found quite effective in patients undergoing middle ear endoscopy. Conclusion: LAT without ventilation tubes provides a safe alternative surgical option in adult patients in certain cases. The selection criteria for this procedure are addressed in detail.

  18. Chandra and Swift Observations of Unidentified Fermi-LAT Objects

    NASA Astrophysics Data System (ADS)

    Donato, Davide; Cheung, T.; Gehrels, N.

    2010-03-01

    In the last year we targeted some of the unidentified Fermi-LAT objects (UFOs) at high Galactic latitude with Chandra and Swift in order to determine the basic properties (positions, fluxes, hardness ratios) of all X-ray sources within the Fermi-LAT localization circles. These satellites enable us to detect the X-ray conterparts with a flux limit that is at least an order of magnitude lower than achieved in extant RASS data and to further follow-up at other wavelengths, with the ultimate goal to reveal the nature of these enigmatic gamma-ray sources. Here we present the results obtained with 5 Chandra pointings of high Galactic latitude UFOs in the Fermi-LAT 3-months bright source list. The association of detected X-ray sources within the improved 11-months Fermi-LAT localization circles with available optical and radio observations is discussed.

  19. Decreased reactivation of a herpes simplex virus type 1 (HSV-1) latency-associated transcript (LAT) mutant using the in vivo mouse UV-B model of induced reactivation.

    PubMed

    BenMohamed, Lbachir; Osorio, Nelson; Srivastava, Ruchi; Khan, Arif A; Simpson, Jennifer L; Wechsler, Steven L

    2015-10-01

    Blinding ocular herpetic disease in humans is due to herpes simplex virus type 1 (HSV-1) reactivations from latency, rather than to primary acute infection. The cellular and molecular immune mechanisms that control the HSV-1 latency-reactivation cycle remain to be fully elucidated. The aim of this study was to determine if reactivation of the HSV-1 latency-associated transcript (LAT) deletion mutant (dLAT2903) was impaired in this model, as it is in the rabbit model of induced and spontaneous reactivation and in the trigeminal ganglia (TG) explant-induced reactivation model in mice. The eyes of mice latently infected with wild-type HSV-1 strain McKrae (LAT((+)) virus) or dLAT2903 (LAT((-)) virus) were irradiated with UV-B, and reactivation was determined. We found that compared to LAT((-)) virus, LAT((+)) virus reactivated at a higher rate as determined by shedding of virus in tears on days 3 to 7 after UV-B treatment. Thus, the UV-B-induced reactivation mouse model of HSV-1 appears to be a useful small animal model for studying the mechanisms involved in how LAT enhances the HSV-1 reactivation phenotype. The utility of the model for investigating the immune evasion mechanisms regulating the HSV-1 latency/reactivation cycle and for testing the protective efficacy of candidate therapeutic vaccines and drugs is discussed.

  20. [Methicillin resistance detection in Staphylococcus aureus: comparison between conventional methods and MRSA-Screen latex agglutination technique].

    PubMed

    Soloaga, R; Corso, A; Gagetti, P; Faccone, D; Galas, M

    2004-01-01

    Methicillin-resistant Staphylococcus aureus (MRSA) is a significant pathogen that has emerged over the last four decades, causing both nosocomial and community-acquired infections. Rapid and accurate detection of methicillin resistance in S. aureus is important for the use of appropriate antimicrobial therapy and for the control of nosocomial spread of MRSA strains. We evaluated the efficiency of conventional methods for detection of methicillin resistance such as the disk diffusion, agar dilution, oxacillin agar screen test, and the latex agglutination test MRSA-Screen latex, in 100 isolates of S. aureus, 79 mecA positive and 21 mecA negative. The MRSA-Screen latex (Denka Seiken, Niigata, Japón), is a latex agglutination method that detects the presence of PLP-2a, product of mecA gene in S. aureus. The PCR of the mecA gene was used as the "gold standard" for the evaluation of the different methods tested. The percentages of sensitivity and specificity were as follows: disk difusión 97 and 100%, agar dilution 97 and 95%, oxacillin agar screen test 100 and 100%, and MRSA-Screen latex, 100 and 100 %. All methods presented high sensitivity and specificity, but MRSA-Screen latex had the advantage of giving a reliable result, equivalent to PCR, in only 15 minutes.

  1. Effect of C-Terminal Protein Tags on Pentitol and l-Arabinose Transport by Ambrosiozyma monospora Lat1 and Lat2 Transporters in Saccharomyces cerevisiae

    PubMed Central

    Richard, Peter; Valkonen, Mari; Viljanen, Kaarina

    2014-01-01

    Functional expression in heterologous hosts is often less successful for integral membrane proteins than for soluble proteins. Here, two Ambrosiozyma monospora transporters were successfully expressed in Saccharomyces cerevisiae as tagged proteins. Growth of A. monospora on l-arabinose instead of glucose caused transport activities of l-arabinose, l-arabitol, and ribitol, measured using l-[1-3H]arabinose, l-[14C]arabitol, and [14C]ribitol of demonstrated purity. A. monospora LAT1 and LAT2 genes were cloned earlier by using their ability to improve the growth of genetically engineered Saccharomyces cerevisiae on l-arabinose. However, the l-arabinose and pentitol transport activities of S. cerevisiae carrying LAT1 or LAT2 are only slightly greater than those of control strains. S. cerevisiae carrying the LAT1 or LAT2 gene fused in frame to the genes for green fluorescent protein (GFP) or red fluorescent protein (mCherry) or adenylate kinase (AK) exhibited large (>3-fold for LAT1; >20-fold for LAT2) increases in transport activities. Lat1-mCherry transported l-arabinose with high affinity (Km ≈ 0.03 mM) and l-arabitol and ribitol with very low affinity (Km ≥ 75 mM). The Lat2-GFP, Lat2-mCherry, and Lat2-AK fusion proteins could not transport l-arabinose but were high-affinity pentitol transporters (Kms ≈ 0.2 mM). The l-arabinose and pentitol transport activities of A. monospora could not be completely explained by any combination of the observed properties of tagged Lat1 and Lat2, suggesting either that tagging and expression in a foreign membrane alters the transport kinetics of Lat1 and/or Lat2 or that A. monospora contains at least one more l-arabinose transporter. PMID:24561586

  2. Effect of C-terminal protein tags on pentitol and L-arabinose transport by Ambrosiozyma monospora Lat1 and Lat2 transporters in Saccharomyces cerevisiae.

    PubMed

    Londesborough, John; Richard, Peter; Valkonen, Mari; Viljanen, Kaarina

    2014-05-01

    Functional expression in heterologous hosts is often less successful for integral membrane proteins than for soluble proteins. Here, two Ambrosiozyma monospora transporters were successfully expressed in Saccharomyces cerevisiae as tagged proteins. Growth of A. monospora on l-arabinose instead of glucose caused transport activities of l-arabinose, l-arabitol, and ribitol, measured using l-[1-(3)H]arabinose, l-[(14)C]arabitol, and [(14)C]ribitol of demonstrated purity. A. monospora LAT1 and LAT2 genes were cloned earlier by using their ability to improve the growth of genetically engineered Saccharomyces cerevisiae on l-arabinose. However, the l-arabinose and pentitol transport activities of S. cerevisiae carrying LAT1 or LAT2 are only slightly greater than those of control strains. S. cerevisiae carrying the LAT1 or LAT2 gene fused in frame to the genes for green fluorescent protein (GFP) or red fluorescent protein (mCherry) or adenylate kinase (AK) exhibited large (>3-fold for LAT1; >20-fold for LAT2) increases in transport activities. Lat1-mCherry transported l-arabinose with high affinity (Km ≈ 0.03 mM) and l-arabitol and ribitol with very low affinity (Km ≥ 75 mM). The Lat2-GFP, Lat2-mCherry, and Lat2-AK fusion proteins could not transport l-arabinose but were high-affinity pentitol transporters (Kms ≈ 0.2 mM). The l-arabinose and pentitol transport activities of A. monospora could not be completely explained by any combination of the observed properties of tagged Lat1 and Lat2, suggesting either that tagging and expression in a foreign membrane alters the transport kinetics of Lat1 and/or Lat2 or that A. monospora contains at least one more l-arabinose transporter.

  3. Induction of inducible nitric oxide synthase expression in ammonia-exposed cultured astrocytes is coupled to increased arginine transport by upregulated y(+)LAT2 transporter.

    PubMed

    Zielińska, Magdalena; Milewski, Krzysztof; Skowrońska, Marta; Gajos, Anna; Ziemińska, Elżbieta; Beręsewicz, Andrzej; Albrecht, Jan

    2015-12-01

    One of the aspects of ammonia toxicity to brain cells is increased production of nitric oxide (NO) by NO synthases (NOSs). Previously we showed that ammonia increases arginine (Arg) uptake in cultured rat cortical astrocytes specifically via y(+)L amino acid transport system, by activation of its member, a heteromeric y(+)LAT2 transporter. Here, we tested the hypothesis that up-regulation of y(+)LAT2 underlies ammonia-dependent increase of NO production via inducible NOS (iNOS) induction, and protein nitration. Treatment of rat cortical astrocytes for 48 with 5 mM ammonium chloride ('ammonia') (i) increased the y(+)L-mediated Arg uptake, (ii) raised the expression of iNOS and endothelial NOS (eNOS), (iii) stimulated NO production, as manifested by increased nitrite+nitrate (Griess) and/or nitrite alone (chemiluminescence), and consequently, (iv) evoked nitration of tyrosine residues of proteins in astrocytes. Except for the increase of eNOS, all the above described effects of ammonia were abrogated by pre-treatment of astrocytes with either siRNA silencing of the Slc7a6 gene coding for y(+)LAT2 protein, or antibody to y(+)LAT2, indicating their strict coupling to y(+)LAT2 activity. Moreover, induction of y(+)LAT2 expression by ammonia was sensitive to Nf-κB inhibitor, BAY 11-7085, linking y(+)LAT2 upregulation to the Nf-κB activation in this experimental setting as reported earlier and here confirmed. Importantly, ammonia did not affect y(+)LAT2 expression nor y(+)L-mediated Arg uptake activity in the cultured cerebellar neurons, suggesting astroglia-specificity of the above described mechanism. The described coupling of up-regulation of y(+)LAT2 transporter with iNOS in ammonia-exposed astrocytes may be considered as a mechanism to ensure NO supply for protein nitration. Ammonia (NH4(+)) increases the expression and activity of the L-arginine (Arg) transporter (Arg/neutral amino acids [NAA] exchanger) y(+)LAT2 in cultured rat cortical astrocytes by a mechanism

  4. Momordica charantia seed lectin: toxicity, bacterial agglutination and antitumor properties.

    PubMed

    Kabir, Syed Rashel; Nabi, Md Mahamodun; Nurujjaman, Md; Abu Reza, Md; Alam, A H M Khurshid; Uz Zaman, Rokon; Khalid-Bin-Ferdaus, Khandaker Md; Amin, Ruhul; Khan, Md Masudul Hasan; Hossain, Md Anowar; Uddin, Md Salim; Mahmud, Zahid Hayat

    2015-03-01

    In last three decades, several studies were carried out on the D-galactose-specific lectin of Momordica charantia seeds (MCL). In the present study, in vitro growth inhibition (8-23 %) at different concentrations (6-24 μg/ml) of MCL was observed against Ehrlich ascites carcinoma (EAC) cells by 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay. MCL also showed 28, 45, and 75 % growth inhibitions against EAC cells when administered 1.2, 2.0, and 2.8 mg/kg/day (i.p.), respectively for five consequent days in vivo in mice. After lectin treatment, the level of red blood cell and hemoglobin was increased significantly with the decrease of white blood cell and maintained the normal level when compared with EAC-bearing control and normal mice without EAC cells. Although MCL caused cell cycle arrest at G0/G1 phase of EAC cells, any irregular shape or apoptotic morphological alterations in the lectin-treated EAC cells was not observed by an optical and fluorescence microscope. Lectin showed toxicity against brine shrimp nauplii with an LC50 value of 49.7 μg/ml. Four out of seven pathogenic bacteria were agglutinated by MCL in the absence of inhibitory sugar D-lactose/D-galactose. In conclusion, MCL showed strong cytotoxic effect and therefore can be used as a potent anticancer chemotherapeutic agent.

  5. The first Fermi LAT supernova remnant catalog

    DOE PAGES

    Acero, F.

    2016-05-16

    To uniformly determine the properties of supernova remnants (SNRs) at high energies, we have developed the first systematic survey at energies from 1 to 100 GeV using data from the Fermi Large Area Telescope. Based on the spatial overlap of sources detected at GeV energies with SNRs known from radio surveys, we classify 30 sources as likely GeV SNRs. We also report 14 marginal associations and 245 flux upper limits. A mock catalog in which the positions of known remnants are scrambled in Galactic longitude, allows us to determine an upper limit of 22% on the number of GeV candidatesmore » falsely identified as SNRs. We have also developed a method to estimate spectral and spatial systematic errors arising from the diffuse interstellar emission model, a key component of all Galactic Fermi LAT analyses. By studying remnants uniformly in aggregate, we measure the GeV properties common to these objects and provide a crucial context for the detailed modeling of individual SNRs. Combining our GeV results with multiwavelength (MW) data, including radio, X-ray, and TeV, demonstrates the need for improvements to previously sufficient, simple models describing the GeV and radio emission from these objects. As a result, we model the GeV and MW emission from SNRs in aggregate to constrain their maximal contribution to observed Galactic cosmic rays.« less

  6. The Cenozoic Diversity of Agglutinated Foraminifera - Evidence for a late Oligocene to early Miocene diversification event

    NASA Astrophysics Data System (ADS)

    Kaminski, Michael; Setoyama, Eiichi; Kender, Sev; Cetean, Claudia

    2014-05-01

    The agglutinated foraminifera are among the most abundant micro-organisms in the deep marine environment and have a diversity record extending back to the late Precambrian. We present an updated diversity curve for agglutinated foraminiferal genera based on the stratigraphic ranges of all the agglutinated genera recognized as valid in the classification of Kaminski (2014). The data set for this analysis is based on the stratigraphic ranges of agglutinated genera published in Foraminiferal Genera and their Classification, which has been subsequently updated based on published studies and our new observations. The mean standing diversity of agglutinated foraminiferal genera was compiled by counting the number of boundary crossers rather than the number of genera in each stage. In this study, we report the stratigraphic and geographical occurrence of a benthic foraminiferal diversification event that has previously received little attention. In the latest Oligocene to earliest Miocene a number of trochospiral agglutinated genera with alveolar or canaliculate walls first appeared in the fossil record. Our studies of late Oligocene of the Congo fan, offshore Angola (Kender et al., 2008; Cetean and Kaminski, 2011) have revealed a diverse assemblage that includes new taxa of deep-water agglutinated foraminifera. In a biostratigraphic study of the Miocene foraminiferal assemblages Kender et al. (2008) noted steadily increasing diversity and proportions of infaunal agglutinated foraminiferal morphotypes over the lower Miocene interval. The proportion of infaunal agglutinated foraminifera assigned to the order Textularida increased dramatically in the lower mid-Miocene, suggesting expansion of the oxygen minimum zone into deeper waters. In addition to the trochospiral alveolar genera, several species of Reticulophragmium and Cyclammina display rapid diversification into numerous separate lineages that are at present not reflected in our generic diversity record owing to

  7. Use of the protective antigen of Erysipelothrix rhusiopathiae in the enzyme-linked immunosorbent assay and latex agglutination.

    PubMed

    Sato, H; Yamazaki, Y; Tsuchiya, K; Aoyama, T; Akaba, N; Suzuki, T; Yokoyama, A; Saito, H; Maehara, N

    1998-09-01

    To establish a safe and convenient serodiagnostic method for swine erysipelas, a purified protective protein antigen of Erysipelothrix rhusiopathiae, which included a large amount of protective protein (64 kDa protein), was used for enzyme-linked immunosorbent assay (ELISA) and the latex agglutination (LA) test. In the ELISA, the antisera to four different serovars (1a, 2, 5 and 20) of E. rhusiopathiae exhibit a positive reaction, while antisera to other species of bacteria (Listeria monocytogenes, Staphylococcus aureus, Streptococcus suis, Rhodococcus equi and Corynebacterium pseudotuberculosis) exhibit a negative reaction. In the LA test, the antisera to three different serovars (1a, 2 and 5) of E. rhusiopathiae reacted with P64-sensitized latex beads, while the antiserum to serovar 20 (2553 strain) did not. Moreover, the antisera to other species of bacteria (Listeria monocytogenes, Staphylococcus aureus, Streptococcus suis, Rhodococcus equi and Corynebacterium pseudotuberculosis) did not in this test. Comparing the results of the growth agglutination (GA), ELISA and LA tests of 284 swine sera, there was a high degree of correlation among the results. The detection of anti-E. rhusiopathiae antibodies in the GA, ELISA and LA tests were compared using sera from pigs immunized with P64, alkaline extract (AE) and live-cell vaccine (LV). In all three tests, anti-E. rhusiopathiae antibodies could be detected 1 week after immunization. The serum antibody titre as determined by the LA test increased moderately, as did that by the GA test, while that determined by ELISA increased rapidly. These results suggested that ELISA could be used to monitor changes in anti-E. rhusiopathiae antibody titre and the LA test could be used in the screening test for swine erysipelas.

  8. Modulation of ligand-mediated human red cell agglutinability by prostaglandins

    SciTech Connect

    McLawhon, R.W.; Marikovsky, Y.; Weinstein, R.S.

    1986-03-01

    Ethanol induces the transformation of human red cells from bioconcave discs to echinocytes in vitro. In addition, they have observed that ethanol can enhance the agglutination of red cells by the plant lectin wheat germ agglutinin or poly-L-lysine. Incubation of washed human red cells with 5 and 10% ethanol (v/v) in phosphate buffered saline, pH 7.3 at 25/sup 0/C produced a 30% increase in ligand-mediated agglutinability within 12 min. Simultaneous addition of ethanol and one of the following prostaglandin derivatives, PGE/sub 1/, pge/sub 2/, pgf/sub 2/-alpha, or PGl/sub 2/ (10/sup -9/ to 5 x 10/sup -7/ M) prevented the shape-associated increases in red cell agglutinability. Thromboxane-B/sub 2/ had no effect on agglutinability. Prostaglandins did not prevent ethanol-induced red cell shape transformations per se under identical experimental conditions. As intragastric administration of 100% ethanol results in the formation of spiculated red cell thrombi in postcapillary venules of rat gastric mucosa, they postulate that the cytoprotective role of prostanoids in preventing mucosal ulceration may be due in part to their capacity to inhibit intravascular ligand mediated red cell agglutination, hemostasis, and their sequelae, epithelial necrosis. Moreover, the data suggest that ethanol-induced red cell shape transformations and ligand-mediated agglutination represent two distinct and independent biological phenomena.

  9. Agglutination by anti-capsular polysaccharide antibody is associated with protection against experimental human pneumococcal carriage

    PubMed Central

    Reiné, J; Zangari, T; Owugha, JT; Pennington, SH; Gritzfeld, JF; Wright, AD; Collins, AM; van Selm, S; de Jonge, MI; Gordon, SB; Weiser, JN; Ferreira, DM

    2016-01-01

    The ability of pneumococcal conjugate vaccine (PCV) to decrease transmission by blocking the acquisition of colonization has been attributed to herd immunity. We describe the role of mucosal IgG to capsular polysaccharide (CPS) in mediating protection from carriage, translating our findings from a murine model to humans. We used a flow-cytometric assay to quantify antibody-mediated agglutination demonstrating that hyperimmune sera generated against an unencapsulated mutant was poorly agglutinating. Passive immunization with this antiserum was ineffective to block acquisition of colonization compared to agglutinating antisera raised against the encapsulated parent strain. In the human challenge model samples were collected from PCV and control vaccinated adults. In PCV-vaccinated subjects IgG levels to CPS were increased in serum and nasal wash (NW). IgG to the inoculated strain CPS dropped in NW samples after inoculation suggesting its sequestration by colonizing pneumococci. In post-vaccination NW samples pneumococci were heavily agglutinated compared to pre-vaccination samples in subjects protected against carriage. Our results indicate that pneumococcal agglutination mediated by CPS specific antibodies is a key mechanism of protection against acquisition of carriage. Capsule may be the only vaccine target that can elicit strong agglutinating antibody responses, leading to protection against carriage acquisition and generation of herd immunity. PMID:27579859

  10. LATS1 and LATS2 Phosphorylate CDC26 to Modulate Assembly of the Tetratricopeptide Repeat Subcomplex of APC/C

    PubMed Central

    Masuda, Kenta; Chiyoda, Tatsuyuki; Sugiyama, Naoyuki; Segura-Cabrera, Aldo; Kabe, Yasuaki; Ueki, Arisa; Banno, Koji; Suematsu, Makoto; Aoki, Daisuke; Ishihama, Yasushi; Saya, Hideyuki; Kuninaka, Shinji

    2015-01-01

    In budding yeast, the Mitotic Exit Network (MEN) regulates anaphase promoting complex/cyclosome (APC/C) via the Dbf2-Cdc14 signaling cascade. Dbf2 kinase phosphorylates and activates Cdc14 phosphatase, which removes the inhibitory phosphorylation of the APC/C cofactor Cdh1. Although each component of the MEN was highly conserved during evolution, there is presently no evidence supporting direct phosphorylation of CDC14 by large tumor suppressor kinase 1 (LATS1), the human counterpart of Dbf2; hence, it is unclear how LATS1 regulates APC/C. Here, we demonstrate that LATS1 phosphorylates the Thr7 (T7) residue of the APC/C component CDC26 directly. Nocodazole-induced phosphorylation of T7 was reduced by knockdown of LATS1 and LATS2 in HeLa cells, indicating that both of these kinases contribute to the phosphorylation of CDC26 in vivo. The T7 residue of CDC26 is critical for its interaction with APC6, a tetratricopeptide repeat-containing subunit of APC/C, and mutation of this residue to Asp (T7D) reduced the interaction of CDC26 with APC6. Replacement of endogenous CDC26 in HeLa cells with exogenous phosphor-mimic T7D-mutated CDC26 increased the elution size of APC/C subunits in a gel filtration assay, implying a change in the APC/C assembly upon phosphorylation of CDC26. Furthermore, T7D-mutated CDC26 promoted the ubiquitination of polo-like kinase 1, a well-known substrate of APC/C. Overall, these results suggest that LATS1/2 are novel kinases involved in APC/C phosphorylation and indicate a direct regulatory link between LATS1/2 and APC/C. PMID:25723520

  11. Boronophenylalanine, a boron delivery agent for boron neutron capture therapy, is transported by ATB0,+, LAT1 and LAT2.

    PubMed

    Wongthai, Printip; Hagiwara, Kohei; Miyoshi, Yurika; Wiriyasermkul, Pattama; Wei, Ling; Ohgaki, Ryuichi; Kato, Itsuro; Hamase, Kenji; Nagamori, Shushi; Kanai, Yoshikatsu

    2015-03-01

    The efficacy of boron neutron capture therapy relies on the selective delivery of boron carriers to malignant cells. p-Boronophenylalanine (BPA), a boron delivery agent, has been proposed to be localized to cells through transporter-mediated mechanisms. In this study, we screened aromatic amino acid transporters to identify BPA transporters. Human aromatic amino acid transporters were functionally expressed in Xenopus oocytes and examined for BPA uptake and kinetic parameters. The roles of the transporters in BPA uptake were characterized in cancer cell lines. For the quantitative assessment of BPA uptake, HPLC was used throughout the study. Among aromatic amino acid transporters, ATB(0,+), LAT1 and LAT2 were found to transport BPA with Km values of 137.4 ± 11.7, 20.3 ± 0.8 and 88.3 ± 5.6 μM, respectively. Uptake experiments in cancer cell lines revealed that the LAT1 protein amount was the major determinant of BPA uptake at 100 μM, whereas the contribution of ATB(0,+) became significant at 1000 μM, accounting for 20-25% of the total BPA uptake in MCF-7 breast cancer cells. ATB(0,+), LAT1 and LAT2 transport BPA at affinities comparable with their endogenous substrates, suggesting that they could mediate effective BPA uptake in vivo. The high and low affinities of LAT1 and ATB(0,+), respectively, differentiate their roles in BPA uptake. ATB(0,+), as well as LAT1, could contribute significantly to the tumor accumulation of BPA at clinical dose.

  12. The First FERMI-LAT Gamma-Ray Burst Catalog

    NASA Technical Reports Server (NTRS)

    Ackermann, M.; Ajello, M.; Asano, K.; Axelsson, M.; Baldini, L.; Ballet, J.; Barbiellini, G.; Bastieri, D.; Bechtol, K.; Bellazzini, R.; Bhat, P. N.; Bissaldi, E.; Bloom, E. D.; Bonamente, E.; Bonnell, J.; Bouvier, A.; Brandt, T. J.; Bregeon, J.; Brigida, M.; Bruel, P.; Burgess, J. Michael; Buson, S.; Byrne, D.; Caliandro, G. A.; Ferrara, E. C.; Gehrels, N.; Guiriec, S.; McEnery, J. E.; Nemmen, R.; Perkins, J. S.; Racusin, J. L.; Thompson, D. J.; Kouveliotou, C.

    2013-01-01

    In three years of observations since the beginning of nominal science operations in 2008 August, the Large Area Telescope (LAT) on board the Fermi Gamma-Ray Space Telescope has observed high-energy great than (20 MeV) gamma-ray emission from 35 gamma-ray bursts (GRBs). Among these, 28 GRBs have been detected above 100 MeV and 7 GRBs above approximately 20 MeV. The first Fermi-LAT catalog of GRBs is a compilation of these detections and provides a systematic study of high-energy emission from GRBs for the first time. To generate the catalog, we examined 733 GRBs detected by the Gamma-Ray Burst Monitor (GBM) on Fermi and processed each of them using the same analysis sequence. Details of the methodology followed by the LAT collaboration for the GRB analysis are provided. We summarize the temporal and spectral properties of the LAT-detected GRBs. We also discuss characteristics of LAT-detected emission such as its delayed onset and longer duration compared with emission detected by the GBM, its power-law temporal decay at late times, and the fact that it is dominated by a power-law spectral component that appears in addition to the usual Band model.

  13. A Southern Sky Survey with Fermi LAT and ASKAP

    SciTech Connect

    Cameron, Robert A.; /SLAC /KIPAC, Menlo Park

    2010-04-29

    We present the prospects for a future joint gamma-ray and radio survey of southern hemisphere sources using the Fermi Large Area Telescope (LAT) and the upcoming Australian Square Kilometre Array Pathfinder (ASKAP) radio telescope. ASKAP is a next generation radio telescope designed to perform surveys at GHz frequencies at a much higher survey speed than previous radio telescopes, and is scheduled to start engineering observations in 2011. The survey capabilities of both Fermi LAT and ASKAP are described, and the planned science surveys for ASKAP are summarized. We give some expected details of the Variable and Slow Transient (VAST) survey using ASKAP, which will search for transients on timescales from 5 seconds to years. Some observational properties of faint and transient sources seen at gamma-ray and radio wavelengths are summarized, and prospects and strategies for using ASKAP survey data for LAT source counterpart identification are summarized.

  14. GeV flares observations with GLAST LAT

    SciTech Connect

    Galli, A.; Omodei, N.; Piro, L.

    2007-07-12

    Early X-ray afterglow observations show that X-ray flares are very common features in GRB light curves. X-ray flares may reflect long duration central engine activity. The delayed flare photons are expected to interact with relativistic electrons by Inverse Compton giving delayed high energy counterparts that potentially will be detected by GLAST LAT, which could observe GRB from 20 MeV to more than 300 GeV. The nature oh high energy spectral components from GRB detected by EGRET is still debated. Observations with GLAST LAT will give useful information to constrain the origin of X-ray flares. In this work we simulate a set of possible GeV emitting flares in the context of External Shock model to study the capability of GLAST LAT to detect GeV flares at different intensities and durations.

  15. Prevalence of agglutinating antibodies to Sarcocystis neurona in skunks (Mephitis Mephitis), raccoons (Procyon lotor), and opossums (Didelphis Virginiana) from Connecticut.

    PubMed

    Mitchell, Sheila M; Richardson, Dennis J; Cheadle, M Andy; Zajac, Anne M; Lindsay, David S

    2002-10-01

    Equine protozoal myeloencephalitis is the most important protozoan disease of horses in North America and is usually caused by Sarcocystis neurona. Natural cases of encephalitis caused by S. neurona have been reported in skunks (Mephitis mephitis) and raccoons (Procyon lotor). Opossums (Didelphis spp.) are the only known definitive host. Sera from 24 striped skunks, 12 raccoons, and 7 opossums (D. virginiana) from Connecticut were examined for agglutinating antibodies to S. neurona using the S. neurona agglutination test (SAT) employing formalin-fixed merozoites as antigen. The SAT was validated for skunk sera using pre- and postinfection serum samples from 2 experimentally infected skunks. Of the 24 (46%) skunks 11 were positive, and all 12 raccoons were positive for S. neurona antibodies. None of the 7 opossums was positive for antibodies to S. neurona. These results suggest that exposure to sporocysts of S. neurona by intermediate hosts is high in Connecticut. The absence of antibodies in opossums collected from the same areas is most likely because of the absence of systemic infection in the definitive host.

  16. Slide Agglutination Method for the Serological Identification of Neisseria gonorrhoeae with Anti-Gonococcal Antibodies Adsorbed to Protein A-Containing Staphylococci

    PubMed Central

    Danielsson, Dan; Kronvall, Göran

    1974-01-01

    A rapid slide agglutination test has been developed for the identification of Neisseria gonorrhoeae that are primarily detected as oxidase-positive colonies in gonococcal cultures. The technique is based on the specific nonimmune reactivity between the Fc portion of immunoglobulin (Ig)G and staphylococcal protein A. IgG molecules adsorbed to stabilized staphylococci will thereby become oriented with their antigen-reactive sites that are directed outwards. Protein A-containing staphylococci with unabsorbed anti-gonococcal antibodies gave positive co-agglutination reactions with gonococci but also with meningococci, some Moraxella, Haemophilus, and Pseudomonas strains. These crossreactions were eliminated by absorption of the anti-gonococcal antiserum with meningococcal and Moraxella organisms prior to the coating of reagent staphylococci. In the routine culture diagnosis of N. gonorrhoeae the use of specific gonococcal reagent staphylococci gave concordant results with fermentation procedures and immunofluorescent techniques. Images PMID:4207280

  17. Activated PLC-γ1 is catalytically induced at LAT but activated PLC-γ1 is localized at both LAT- and TCR-containing complexes.

    PubMed

    Cruz-Orcutt, Noemi; Vacaflores, Aldo; Connolly, Sean F; Bunnell, Stephen C; Houtman, Jon C D

    2014-04-01

    Phospholipase C-γ1 (PLC-γ1) is a key regulator of T cell receptor (TCR)-induced signaling. Activation of the TCR enhances PLC-γ1 enzymatic function, resulting in calcium influx and the activation of PKC family members and RasGRP. The current model is that phosphorylation of LAT tyrosine 132 facilitates the recruitment of PLC-γ1, leading to its activation and function at the LAT complex. In this study, we examined the phosphorylation kinetics of LAT and PLC-γ1 and the cellular localization of activated PLC-γ1. We observed that commencement of the phosphorylation of LAT tyrosine 132 and PLC-γ1 tyrosine 783 occurred simultaneously, supporting the current model. However, once begun, PLC-γ1 activation occurred more rapidly than LAT tyrosine 132. The association of LAT and PLC-γ1 was more transient than the interaction of LAT and Grb2 and a pool of activated PLC-γ1 translocated away from LAT to cellular structures containing the TCR. These studies demonstrate that LAT and PLC-γ1 form transient interactions that catalyze the activation of PLC-γ1, but that activated PLC-γ1 resides in both LAT and TCR clusters. Together, this work highlights that our current model is incomplete and the activation and function of PLC-γ1 in T cells is highly complex.

  18. Interaction of bacterial endotoxine (lipopolysaccharide) with latex particles: application to latex agglutination immunoassays.

    PubMed

    Peula-García, J M; Molina-Bolivar, J A; Velasco, J; Rojas, A; Galisteo-González, F

    2002-01-15

    The latex agglutination immunoassay technique uses polymer colloids as carriers for antibodies or antigens to enhance the immunological reaction. In this work, the interaction of a lipopolysaccharide (LPS) of Brucella Melitensis with two conventional latexes has been studied. Some experiments on the physical adsorption of the LPS onto these polystyrene beads have been performed and several complexes with different coverage degrees were obtained by modifying the incubation conditions. Regarding the application in the development of diagnostic test systems, it is advisable to study the latex-LPS complexes from an electrokinetic and colloidal stability point of view. The complexes were electrokinetically characterized by measuring the electrophoretic mobility under different redispersion conditions. The colloidal stability was determined by simple turbidity measurements. Experimental and theoretical data have been employed to study the molecular disposition of the LPS in the latex particle surface to compare with the outer membrane of bacterial cells. Latex complexes covered by different LPS amounts showed high colloidal stability and adequate immunoreactivity that remains for a long time period.

  19. Reading development in agglutinative languages: evidence from beginning, intermediate, and adult Basque readers.

    PubMed

    Acha, Joana; Laka, Itziar; Perea, Manuel

    2010-04-01

    Do typological properties of language, such as agglutination (i.e., the morphological process of adding affixes to the lexeme of a word), have an impact on the development of visual word recognition? To answer this question, we carried out an experiment in which beginning, intermediate, and adult Basque readers (n=32 each, average age=7, 11, and 22 years, respectively) needed to read correctly versus incorrectly inflected words embedded in sentences. Half of the targets contained high-frequency stems, and the other half contained low-frequency stems. To each stem, four inflections of different lengths were attached (-a, -ari, -aren, and -arentzat, i.e., inflectional sequences). To test whether the process of word recognition was modulated by the knowledge of word structure in the language, half of the participants' native language was Basque and the other half's native language was Spanish. Children showed robust effects of frequency and length of inflection that diminished with age. In addition, the effect of length of inflection was modulated by the frequency of the stem and by the native language. Taken together, these results suggest that word recognition develops from a decoding strategy to a direct lexical access strategy and that this process is modulated by children's knowledge of the inflectional structure of words from the beginning of their reading experience.

  20. LAT1 is the transport competent unit of the LAT1/CD98 heterodimeric amino acid transporter.

    PubMed

    Napolitano, Lara; Scalise, Mariafrancesca; Galluccio, Michele; Pochini, Lorena; Albanese, Leticia Maria; Indiveri, Cesare

    2015-10-01

    LAT1 (SLC7A5) and CD98 (SLC3A2) constitute a heterodimeric transmembrane protein complex that catalyzes amino acid transport. Whether one or both subunits are competent for transport is still unclear. The present work aims to solve this question using different experimental strategies. Firstly, LAT1 and CD98 were immuno-detected in protein extracts from SiHa cells. Under oxidizing conditions, i.e., without addition of SH (thiol) reducing agent DTE, both proteins were revealed as a 120kDa major band. Upon DTE treatment separated bands, corresponding to LAT1(35kDa) or CD98(80kDa), were detected. LAT1 function was evaluated in intact cells as BCH sensitive [(3)H]His transport inhibited by hydrophobic amino acids. Antiport of [(3)H]His was measured in proteoliposomes reconstituted with SiHa cell extract in presence of internal His. Transport was increased by DTE. Hydrophobic amino acids were best inhibitors in addition to hydrophilic Tyr, Gln, Asn and Lys. Cys, Tyr and Gln, included in the intraliposomal space, were transported in antiport with external [(3)H]His. Similar experiments were performed in proteoliposomes reconstituted with the recombinant purified hLAT1. Results overlapping those obtained with native protein were achieved. Lower transport of [(3)H]Leu and [(3)H]Gln with respect to [(3)H]His was detected. Kinetic asymmetry was found with external Km for His lower than internal one. No transport was detected in proteoliposomes reconstituted with recombinant hCD98. The experimental data demonstrate that LAT1 is the sole transport competent subunit of the heterodimer. This conclusion has important outcome for following studies on functional characterization and identification of specific inhibitors with potential application in human therapy.

  1. Prevention of nonspecific reactions on reversed passive latex agglutination assay (RPLA) for detecting low amounts of staphylococcal enterotoxins.

    PubMed

    Pereira, M L; Heneine, L G; Santos, E J; Carmo, L S; Pereira, J L; Bergdoll, M S

    1997-01-01

    The SET-RPLA, from Denka Seiken Co. Ltd., Tokio, a commercial reversed passive latex agglutination test kit, has been recommended to establish the enterotoxicity capacity of some staphylococcal strains, implicated in food poisoning outbreaks that produce low levels of enterotoxins (SE). Despite the RPLA specificity, the occurrence of nonspecific reactions when testing low-SE-producing is common. In order to control these nonspecific reactions the addition of purified normal rabbit IgG purified was applied on approximately 350 staphylococcal isolates from human milk and anatomic sites of healthy dental student carriers. The results indicated that addition of 5% (v/v) of purified normal rabbit IgG (0.74 mg/mL) to the culture supernatant fluid is a simple and reliable tool for the controlling of nonspecific reactions in the RPLA assay.

  2. Studying Gamma-Ray Blazars With the GLAST-LAT

    SciTech Connect

    Lott, B.; Carson, J.; Madejski, G.; Ciprini, S.; Dermer, C.D.; Giommi, P.; Lonjou, V.; Reimer, A.; /Stanford U., HEPL /KIPAC, Menlo Park

    2007-11-13

    Thanks to its sensitivity (4 10{sup -9} ph (E> 100 MeV) cm{sup -2} s{sup -1} for one year of observation), the GLAST LAT should detect many more (over a thousand) gamma-ray blazars than currently known. This large blazar sample will enable detailed population studies to be carried out. Moreover, the LAT large field-of-view combined with the scanning mode will provide a very uniform exposure over the sky, allowing a constant monitoring of several tens of blazars and flare alerts to be issued. This poster presents the LAT performance relevant to blazar studies, more particularly related to timing and spectral properties. Major specific issues regarding the blazar phenomenon that the LAT data should shed light on thanks to these capabilities will be discussed, as well as the different approaches foreseen to address them. The associated data required in other bands, to be collected in contemporaneous/simultaneous multiwavelength campaigns are mentioned as well.

  3. Helicobacter pylori TlyA agglutinates liposomes and induces fusion and permeabilization of the liposome membranes.

    PubMed

    Lata, Kusum; Chattopadhyay, Kausik

    2014-06-10

    Helicobacter pylori TlyA is a pore-forming hemolysin with potent cytotoxic activity. To explore the potential membrane-damaging activity of H. pylori TlyA, we have studied its interaction with the synthetic liposome vesicles. In our study, H. pylori TlyA shows a prominent ability to associate with the liposome vesicles without displaying an obligatory requirement for any protein receptor on the liposome membranes. Interaction of TlyA triggers agglutination of the liposome vesicles. Such agglutinating activity of TlyA could also be observed with erythrocytes before the induction of its pore-forming hemolytic activity. In addition to its agglutinating activity against liposomes, TlyA also induces fusion and disruption of the liposome membranes. Altogether, our study highlights novel membrane-damaging properties of H. pylori TlyA that have not been documented previously with any other TlyA family protein.

  4. SUPPRESSION OF BLOOD GROUP AGGLUTINABILITY OF HUMAN ERYTHROCYTES BY CERTAIN BACTERIAL POLYSACCHARIDES

    PubMed Central

    Ceppellini, Ruggero; Landy, Maurice

    1963-01-01

    Erythrocytes coated with bacterial capsular polysaccharides, notably the Vi antigen, were no longer agglutinated by antibodies directed against the various antigens native to the red cell surface. These effects could not be attributed to prevention of antibody uptake even though in some systems the uptake of antibody was diminished. In fact, agglutination by Rh-incomplete antibody was brought back to the original titer only after the sensitized Vi-coated cells had been subjected to ten alternating exposures to globulin and antiglobulin. Hemagglutination by Newcastle, mumps, and influenza viruses was also suppressed. Erythrocytes coated with Vi polysaccharide assumed the distinctive physicochemical attributes of this acidic polymer which results in a stabilization of the erythrocyte suspension as manifested by increased electrophoretic mobility and a striking decrease in the rate of sedimentation. Among the possible models for explaining the nature of the Vi effect on immune agglutination, the data favor interference with lattice formation. PMID:14019651

  5. Agglutinates as recorders of fossil soil compositions. [of Apollo 17 lunar probes

    NASA Technical Reports Server (NTRS)

    Taylor, G. J.; Wentworth, S.; Warner, R. D.; Keil, K.

    1978-01-01

    The composition of agglutinates in polished sections of the Apollo 17 drill core was studied in an attempt to deduce the nature of the Taurus-Littrow valley regolith prior to the formation of the Camelot and Central Cluster craters. The agglutinate compositions in the soils differed from the host soil compositions except for samples from the North Massif. Local materials from the valley floor and the massifs appear to form the pre-Central Cluster regolith. It is also shown that chemical mixing models for bulk soil compositions can be misleading unless the petrologic characteristics of each soil are taken into account.

  6. LATS1/WARTS phosphorylates MYPT1 to counteract PLK1 and regulate mammalian mitotic progression

    PubMed Central

    Chiyoda, Tatsuyuki; Sugiyama, Naoyuki; Shimizu, Takatsune; Naoe, Hideaki; Kobayashi, Yusuke; Ishizawa, Jo; Arima, Yoshimi; Tsuda, Hiroshi; Ito, Masaaki; Kaibuchi, Kozo; Aoki, Daisuke; Ishihama, Yasushi

    2012-01-01

    In the mitotic exit network of budding yeast, Dbf2 kinase phosphorylates and regulates Cdc14 phosphatase. In contrast, no phosphatase substrates of LATS1/WARTS kinase, the mammalian equivalent of Dbf2, has been reported. To address this discrepancy, we performed phosphoproteomic screening using LATS1 kinase. Screening identified MYPT1 (myosin phosphatase–targeting subunit 1) as a new substrate for LATS1. LATS1 directly and preferentially phosphorylated serine 445 (S445) of MYPT1. An MYPT1 mutant (S445A) failed to dephosphorylate Thr 210 of PLK1 (pololike kinase 1), thereby activating PLK1. This suggests that LATS1 promotes MYPT1 to antagonize PLK1 activity. Consistent with this, LATS1-depleted HeLa cells or fibroblasts from LATS1 knockout mice showed increased PLK1 activity. We also found deoxyribonucleic acid (DNA) damage–induced LATS1 activation caused PLK1 suppression via the phosphorylation of MYPT1 S445. Furthermore, LATS1 knockdown cells showed reduced G2 checkpoint arrest after DNA damage. These results indicate that LATS1 phosphorylates a phosphatase as does the yeast Dbf2 and demonstrate a novel role of LATS1 in controlling PLK1 at the G2 DNA damage checkpoint. PMID:22641346

  7. Outbreak of Uncommon O4 Non-Agglutinating Salmonella Typhimurium Linked to Minced Pork, Saxony-Anhalt, Germany, January to April 2013

    PubMed Central

    Helmeke, Carina; Kohlstock, Claudia; Prager, Rita; Tietze, Erhard; Rabsch, Wolfgang; Karagiannis, Ioannis; Werber, Dirk; Frank, Christina; Fruth, Angelika

    2015-01-01

    Introduction In January 2013, the National Reference Centre for Salmonella (NRC) detected a salmonellosis cluster in Saxony-Anhalt, Germany, caused by uncommon O4 non-agglutinating, monophasic Salmonella (S.) Typhimurium DT193. Circulating predominant monophasic S. Typhimurium DT193 clones typically display resistance phenotype ASSuT. We investigated common exposures to control the outbreak, and conducted microbiological investigations to assess the strains’ phenotype. Methods We conducted a case-control study defining cases as persons living or working in Saxony-Anhalt diagnosed with the O4 non-agglutinating strain between January and March 2013. We selected two controls contemporarily reported with norovirus infection, frequency-matched on residence and age group, per case. We interviewed regarding food consumption, especially pork and its place of purchase. We calculated odds ratios (ORs) with 95% confidence intervals (95% CI) using logistic regression. The NRC investigated human and food isolates by PCR, SDS-PAGE, MLST, PFGE, MLVA and susceptibility testing. Results Altogether, 68 O4 non-agglutinating human isolates were confirmed between January and April 2013. Of those, 61 were assigned to the outbreak (median age 57 years, 44% female); 83% cases ≥ 60 years were hospitalized. Eating raw minced pork from butcheries within 3 days was associated with disease (31 cases, 28 controls; OR adjusted for sex: 3.6; 95% CI: 1.0-13). Phage type DT193 and MLST ST34 were assigned, and isolates’ lipopolysaccharide (LPS) matched control strains. Isolates linked to Saxony-Anhalt exhibited PFGE type 5. ASSuT- and ACSSuT phenotype proportions were 34 and 39% respectively; 54% were resistant to chloramphenicol. Three pork isolates matched the outbreak strain. Discussion Raw minced pork was the most likely infection vehicle in this first reported outbreak caused by O4 non-agglutinating, mostly chloramphenicol-resistant S. Typhimurium DT193. High hospitalization proportions

  8. A STACKED ANALYSIS OF 115 PULSARS OBSERVED BY THE FERMI LAT

    SciTech Connect

    McCann, A.

    2015-05-10

    Due to the low gamma-ray fluxes from pulsars above 50 GeV and the small collecting area of space-based telescopes, the gamma-ray emission discovered by the Fermi Large Area Telescope (LAT) in ∼150 pulsars is largely unexplored at these energies. In this regime, the uncertainties on the spectral data points and/or the constraints from upper limits are not sufficient to provide robust tests of competing emission models in individual pulsars. The discovery of power-law-type emission from the Crab pulsar at energies exceeding 100 GeV provides a compelling justification for exploration of other pulsars at these energies. We applied the method of aperture photometry to measure pulsar emission spectra from Fermi-LAT data and present a stacked analysis of 115 pulsars selected from the Second Fermi-LAT catalog of gamma-ray pulsars. This analysis, which uses an average of ∼4.2 yr of data per pulsar, aggregates low-level emission which cannot be resolved in individual objects but can be detected in an ensemble. We find no significant stacked excess at energies above 50 GeV. An upper limit of 30% of the Crab pulsar level is found for the average flux from 115 pulsars in the 100–177 GeV energy range at the 95% confidence level. Stacked searches exclusive to the young pulsar sample, the millisecond pulsar sample, and several other promising sub-samples also return no significant excesses above 50 GeV.

  9. A new LDLa domain-containing C-type lectin with bacterial agglutinating and binding activity in amphioxus.

    PubMed

    Qu, Baozhen; Yang, Shuangshuang; Ma, Zengyu; Gao, Zhan; Zhang, Shicui

    2016-12-15

    Over 1200 C-type lectin gene models have been identified in amphioxus, but only a few of them have been functionally characterized. In this study, we identified a C-type lectin, BjCTL, with domain structure of LDLa-CTLD-EGF_Lam, the first such data in chordates. It was expressed mainly in the notochord and ovary in a tissue-dependent fashion. Recombinant BjCTL was characterized as a typical Ca(2+)-dependent carbohydrate-binding protein capable of agglutinating and binding to both Gram-negative and positive bacteria we tested. In addition, it specifically bound to insoluble lipopolysaccharide, lipoteichoic acid and peptidoglycan, which can be inhibited by galactose. We also showed that the interaction of BjCTL with the bacteria is primarily attributable to CTLD domain. Thus, BjCTL is a novel pattern recognition protein involved in lectin-mediated innate immunity.

  10. Gelatin particle indirect agglutination and enzyme-linked immunosorbent assay for diagnosis of strongyloidiasis using Strongyloides venezuelensis antigen.

    PubMed

    Huaman, Maria Cecilia; Sato, Yoshiya; Aguilar, Jose Luis; Terashima, Angelica; Guerra, Humberto; Gotuzzo, Eduardo; Kanbara, Hiroji

    2003-01-01

    Routine microscopical examination of stool specimens for diagnosis of strongyloidiasis is insensitive and serological methods using Strongyloides stercoralis antigen are at present not available for field studies. We evaluated 2 techniques, enzyme-linked immunosorbent assay (ELISA) and gelatin particle indirect agglutination (GPIA), using an antigen obtained from the rodent parasite, S. venezuelensis. Fifty-four Peruvian patients with different clinical forms of strongyloidiasis were studied: 12 asymptomatic, 31 symptomatic, and 11 hyperinfection cases. Our results demonstrate that both ELISA and GPIA using S. venezuelensis antigen are useful for diagnosis of strongyloidiasis, with sensitivities of 74.1% and 98.2%, respectively and a specificity of 100% for both techniques. We found that GPIA is a highly sensitive test for patients with suspected chronic infection and/or hyperinfection. In the hyperinfection cases, significantly lower concentrations of specific immunoglobulin antibodies and eosinophils (P < 0.001) were found compared with the asymptomatic and symptomatic cases.

  11. Real time observation and automated measurement of red blood cells agglutination inside a passive microfluidic biochip containing embedded reagents.

    PubMed

    Huet, Maxime; Cubizolles, Myriam; Buhot, Arnaud

    2016-09-20

    The process of agglutination is commonly used for the detection of biomarkers like proteins or viruses. The multiple bindings between micrometer sized particles, either latex beads or red blood cells (RBCs), create aggregates that are easily detectable and give qualitative information about the presence of the biomarkers. In most cases, the detection is made by simple naked-eye observation of agglutinates without any access to the kinetics of agglutination. In this study, we address the development of a real-time time observation of RBCs agglutination. Using ABO blood typing as a proof-of-concept, we developed i) an integrated biological protocol suitable for further use as point-of-care (POC) analysis and ii) two dedicated image processing algorithms for the real-time and quantitative measurement of agglutination. Anti-A or anti-B typing reagents were dried inside the microchannel of a passive microfluidic chip designed to enhance capillary flow. A blood drop deposit at the tip of the biochip established a simple biological protocol. In situ agglutination of autologous RBCs was achieved by means of embedded reagents and real time agglutination process was monitored by video recording. Using a training set of 24 experiments, two real-time indicators based on correlation and variance of gray levels were optimized and then further confirmed on a validation set. 100% correct discrimination between positive and negative agglutinations was performed within less than 2min by measuring real-time evolution of both correlation and variance indicators.

  12. Single agglutinates: A comparative study of compositions of agglutinitic glass, whole-grain, bulk soil, and FMR

    NASA Technical Reports Server (NTRS)

    Basu, A.; Robinson, R.; Mckay, D. S.; Blanchard, D. P.; Morris, R. V.; Wentworth, Susan J.

    1994-01-01

    Previous workers on single agglutinates have variously interpreted the composition of agglutinitic glass to represent impact melts of (1) bulk soil, (2) mixed components in finer sizes, and (3) microtargets. Separately, Papike has argued in favor of fusion of the finest fraction of bulk soils. Thirty-four single agglutinates were hand-picked from the mature Apollo 16 soil 61181 (I(sub s)/FeO = 82) and the FMR and chemical composition (INAA for Fe, Sc, Sm, Co, Ni, and Cr) of each agglutinate particle were measured. Thirteen of these single agglutinates were selected for electron beam microanalysis and imaging. Less than 1 micron spots were analyzed (for Na, Mg, Al, Si, P, S, K, Ca, Ti, Cr, Mn, Fe, Ni, and Ba) on pure glassy areas (approximately ten in each particle) selected on the basis of optical and BSE images (avoiding all clasts and inclusions) with an electron microprobe to obtain average glass compositions of each single agglutinate.

  13. Reading Development in Agglutinative Languages: Evidence from Beginning, Intermediate, and Adult Basque Readers

    ERIC Educational Resources Information Center

    Acha, Joana; Laka, Itziar; Perea, Manuel

    2010-01-01

    Do typological properties of language, such as agglutination (i.e., the morphological process of adding affixes to the lexeme of a word), have an impact on the development of visual word recognition? To answer this question, we carried out an experiment in which beginning, intermediate, and adult Basque readers (n = 32 each, average age = 7, 11,…

  14. FERMI-LAT DETECTION OF PULSED GAMMA-RAYS ABOVE 50 GeV FROM THE VELA PULSAR

    SciTech Connect

    Leung, Gene C. K.; Takata, J.; Ng, C. W.; Cheng, K. S.; Kong, A. K. H.; Tam, P. H. T.; Hui, C. Y. E-mail: takata@hku.hk

    2014-12-20

    The first Fermi-Large Area Telescope (LAT) catalog of sources above 10 GeV reported evidence of pulsed emission above 25 GeV from 12 pulsars, including the Vela pulsar, which showed evidence of pulsation at >37 GeV energy bands. Using 62 months of Fermi-LAT data, we analyzed the gamma-ray emission from the Vela pulsar and searched for pulsed emission above 50 GeV. Having confirmed the significance of the pulsation in 30-50 GeV with the H test (p-value ∼10{sup –77}), we extracted its pulse profile using the Bayesian block algorithm and compared it with the distribution of the five observed photons above 50 GeV using the likelihood ratio test. Pulsation was significantly detected for photons above 50 GeV with a p-value of =3 × 10{sup –5} (4.2σ). The detection of pulsation is significant above 4σ at >79 GeV and above 3σ at >90 GeV energy bands, making this the highest energy pulsation significantly detected by the LAT. We explore the non-stationary outer gap scenario of the very high-energy emissions from the Vela pulsar.

  15. Search for Dark Matter Satellites Using the Fermi-Lat

    NASA Technical Reports Server (NTRS)

    Ackermann, M.; Albert, A.; Baldini, L.; Ballet, J.; Barbiellini, G.; Bastieri, D.; Bechtol, K.; Bellazzini, R.; Blandford, R. D.; Bloom, E. D.; Bonamente, E.; Borgland, A. W.; Bottacini, E.; Brandt, T. J.; Bregeon, J.; Brigida, M.; Bruel, P.; Buehler, R.; Burnett, T. H.; Caliandro, G. A.; Cameron, R. A.; Caraveo, P. A.; Casandjian, J. M.; McEnery, J. E.; Troja, E.

    2012-01-01

    Numerical simulations based on the ACDM model of cosmology predict a large number of as yet unobserved Galactic dark matter satellites. We report the results of a Large Area Telescope (LAT) search for these satellites via the gamma-ray emission expected from the annihilation of weakly interacting massive particle (WIMP) dark matter. Some dark matter satellites are expected to have hard gamma-ray spectra, finite angular extents, and a lack of counterparts at other wavelengths. We sought to identify LAT sources with these characteristics, focusing on gamma-ray spectra consistent with WIMP annihilation through the bb(sup raised bar) channel. We found no viable dark matter satellite candidates using one year of data, and we present a framework for interpreting this result in the context of numerical simulations to constrain the velocity-averaged annihilation cross section for a conventional 100 Ge V WIMP annihilating through the bb(sup raised bar) channel.

  16. Search for Dark Matter Satellites Using the FERMI-LAT

    SciTech Connect

    Ackermann, M.; Albert, A.; Baldini, L.; Ballet, J.; Barbiellini, G.; Bastieri, D.; Bechtol, K.; Bellazzini, R.; Blandford, R.D.; Bloom, E.D.; Bonamente, E.; Borgland, A.W.; Bottacini, E.; Brandt, T.J.; Bregeon, J.; Brigida, M.; Bruel, P.; Buehler, R.; Burnett, T.H.; Caliandro, G.A.; Cameron, R.A.; /more authors..

    2012-08-16

    Numerical simulations based on the {Lambda}CDM model of cosmology predict a large number of as yet unobserved Galactic dark matter satellites. We report the results of a Large Area Telescope (LAT) search for these satellites via the {gamma}-ray emission expected from the annihilation of weakly interacting massive particle (WIMP) dark matter. Some dark matter satellites are expected to have hard {gamma}-ray spectra, finite angular extents, and a lack of counterparts at other wavelengths. We sought to identify LAT sources with these characteristics, focusing on {gamma}-ray spectra consistent with WIMP annihilation through the b{bar b} channel. We found no viable dark matter satellite candidates using one year of data, and we present a framework for interpreting this result in the context of numerical simulations to constrain the velocity-averaged annihilation cross section for a conventional 100 GeV WIMP annihilating through the b{bar b} channel.

  17. The Production of Nominal and Verbal Inflection in an Agglutinative Language: Evidence from Hungarian

    PubMed Central

    Peckham, Don; Szanka, Szilvia; Gazso, Dorottya; Lovassy, Noemi; Ullman, Michael T.

    2015-01-01

    The contrast between regular and irregular inflectional morphology has been useful in investigating the functional and neural architecture of language. However, most studies have examined the regular/irregular distinction in non-agglutinative Indo-European languages (primarily English) with relatively simple morphology. Additionally, the majority of research has focused on verbal rather than nominal inflectional morphology. The present study attempts to address these gaps by introducing both plural and past tense production tasks in Hungarian, an agglutinative non-Indo-European language with complex morphology. Here we report results on these tasks from healthy Hungarian native-speaking adults, in whom we examine regular and irregular nominal and verbal inflection in a within-subjects design. Regular and irregular nouns and verbs were stem on frequency, word length, and phonological structure, and both accuracy and response times were acquired. The results revealed that the regular/irregular contrast yields similar patterns in Hungarian, for both nominal and verbal inflection, as in previous studies of non-agglutinative Indo-European languages: the production of irregular inflected forms was both less accurate and slower than of regular forms, both for plural and past-tense inflection. The results replicate and extend previous findings to an agglutinative language with complex morphology. Together with previous studies, the evidence suggests that the regular/irregular distinction yields a basic behavioral pattern that holds across language families and linguistic typologies. Finally, the study sets the stage for further research examining the neurocognitive substrates of regular and irregular morphology in an agglutinative non-Indo-European language. PMID:25769039

  18. Interactions with lectins and agglutination profiles of clinical, food, and environmental isolates of Listeria.

    PubMed Central

    Facinelli, B; Giovanetti, E; Casolari, C; Varaldo, P E

    1994-01-01

    On the basis of preliminary trials with 14 collection strains of Listeria, five lectins (Canavalia ensiformis, concanavalin A; Griffonia simplicifolia lectin I; Helix pomatia agglutinin; Ricinus communis agglutinin; and Triticum vulgaris wheat germ agglutinin) were selected to set up a microtiter agglutination assay. The lectin agglutination profiles of 174 clinical, food, and environmental strains of Listeria monocytogenes, Listeria innocua, and Listeria seeligeri were investigated. Data on the standard determination of the antigenic structure were available for clinical strains; nonclinical isolates were assigned to serogroup 1 or 4 with commercial antisera. The listeria-lectin interaction was related to serological type rather than species; in particular, the strains assigned to serogroup 1 or belonging to serovars 1/2a, 1/2b, 1/2c, 3a, 3b, and 7 were never agglutinated by G. simplicifolia lectin I. The five-lectin set proved to be capable of detecting differences between serologically identical isolates of L. monocytogenes. Of the 150 isolates of this species, 144 were distributed over 15 different lectin agglutination profiles and 6 autoagglutinated, the overall typeability being 96%. However, the profiles encountered among L. monocytogenes isolates were not randomly distributed. With strains assigned to serogroup 1 or belonging to serovars 1/2a, 1/2b, 1/2c, and 3b, the clinical isolates fell into only two of the eight patterns recorded overall; with strains of serogroup 4 and serovar 4b, food and environmental isolates were distributed over eight of the nine patterns found in total, while clinical isolates were distributed over five patterns. In a comparative study of 15 epidemiologically relevant isolates of L. monocytogenes from five distinct outbreaks, strains with identical phage types and/or DNA fingerprints displayed identical lectin profiles. The heterogeneity of agglutination profiles may form the basis of a new approach to L. monocytogenes typing

  19. The production of nominal and verbal inflection in an agglutinative language: evidence from Hungarian.

    PubMed

    Nemeth, Dezso; Janacsek, Karolina; Turi, Zsolt; Lukacs, Agnes; Peckham, Don; Szanka, Szilvia; Gazso, Dorottya; Lovassy, Noemi; Ullman, Michael T

    2015-01-01

    The contrast between regular and irregular inflectional morphology has been useful in investigating the functional and neural architecture of language. However, most studies have examined the regular/irregular distinction in non-agglutinative Indo-European languages (primarily English) with relatively simple morphology. Additionally, the majority of research has focused on verbal rather than nominal inflectional morphology. The present study attempts to address these gaps by introducing both plural and past tense production tasks in Hungarian, an agglutinative non-Indo-European language with complex morphology. Here we report results on these tasks from healthy Hungarian native-speaking adults, in whom we examine regular and irregular nominal and verbal inflection in a within-subjects design. Regular and irregular nouns and verbs were stem on frequency, word length, and phonological structure, and both accuracy and response times were acquired. The results revealed that the regular/irregular contrast yields similar patterns in Hungarian, for both nominal and verbal inflection, as in previous studies of non-agglutinative Indo-European languages: the production of irregular inflected forms was both less accurate and slower than of regular forms, both for plural and past-tense inflection. The results replicate and extend previous findings to an agglutinative language with complex morphology. Together with previous studies, the evidence suggests that the regular/irregular distinction yields a basic behavioral pattern that holds across language families and linguistic typologies. Finally, the study sets the stage for further research examining the neurocognitive substrates of regular and irregular morphology in an agglutinative non-Indo-European language.

  20. Combined albumin and bicarbonate induces head-to-head sperm agglutination which physically prevents equine sperm-oviduct binding.

    PubMed

    Leemans, Bart; Gadella, Bart M; Stout, Tom A E; Sostaric, Edita; De Schauwer, Catharina; Nelis, Hilde; Hoogewijs, Maarten; Van Soom, Ann

    2016-04-01

    In many species, sperm binding to oviduct epithelium is believed to be an essential step in generating a highly fertile capacitated sperm population primed for fertilization. In several mammalian species, this interaction is based on carbohydrate-lectin recognition. D-galactose has previously been characterized as a key molecule that facilitates sperm-oviduct binding in the horse. We used oviduct explant and oviduct apical plasma membrane (APM) assays to investigate the effects of various carbohydrates; glycosaminoglycans; lectins; S-S reductants; and the capacitating factors albumin, Ca(2+) and HCO3(-) on sperm-oviduct binding in the horse. Carbohydrate-specific lectin staining indicated that N-acetylgalactosamine, N-acetylneuraminic acid (sialic acid) and D-mannose or D-glucose were the most abundant carbohydrates on equine oviduct epithelia, whereas D-galactose moieties were not detected. However, in a competitive binding assay, sperm-oviduct binding density was not influenced by any tested carbohydrates, glycosaminoglycans, lectins or D-penicillamine, nor did the glycosaminoglycans induce sperm tail-associated protein tyrosine phosphorylation. Furthermore, N-glycosidase F (PNGase) pretreatment of oviduct explants and APM did not alter sperm-oviduct binding density. By contrast, a combination of the sperm-capacitating factors albumin and HCO3(-) severely reduced (>10-fold) equine sperm-oviduct binding density by inducing rapid head-to-head agglutination, both of which events were independent of Ca(2+) and an elevated pH (7.9). Conversely, neither albumin and HCO3(-) nor any other capacitating factor could induce release of oviduct-bound sperm. In conclusion, a combination of albumin and HCO3(-) markedly induced sperm head-to-head agglutination which physically prevented stallion sperm to bind to oviduct epithelium.

  1. Constraining decaying dark matter with Fermi LAT gamma-rays

    SciTech Connect

    Zhang, Le; Sigl, Günter; Weniger, Christoph; Maccione, Luca; Redondo, Javier E-mail: christoph.weniger@desy.de E-mail: redondo@mppmm.mpg.de

    2010-06-01

    High energy electrons and positrons from decaying dark matter can produce a significant flux of gamma rays by inverse Compton off low energy photons in the interstellar radiation field. This possibility is inevitably related with the dark matter interpretation of the observed PAMELA and FERMI excesses. The aim of this paper is providing a simple and universal method to constrain dark matter models which produce electrons and positrons in their decay by using the Fermi LAT gamma-ray observations in the energy range between 0.5 GeV and 300 GeV. We provide a set of universal response functions that, once convolved with a specific dark matter model produce the desired constraints. Our response functions contain all the astrophysical inputs such as the electron propagation in the galaxy, the dark matter profile, the gamma-ray fluxes of known origin, and the Fermi LAT data. We study the uncertainties in the determination of the response functions and apply them to place constraints on some specific dark matter decay models that can well fit the positron and electron fluxes observed by PAMELA and Fermi LAT. To this end we also take into account prompt radiation from the dark matter decay. We find that with the available data decaying dark matter cannot be excluded as source of the PAMELA positron excess.

  2. Gamma-ray blazars and active galactic nuclei seen by the Fermi-LAT

    NASA Astrophysics Data System (ADS)

    Lott, B.; Cavazzuti, E.; Ciprini, S.; Cutini, S.; Gasparrini, D.

    2015-03-01

    The third catalog of active galactic nuclei (AGNs) detected by the Fermi-LAT (3LAC) is presented. It is based on the third Fermi-LAT catalog (3FGL) of sources detected with a test statistic (TS) greater than 25 using the first 4 years of data. The 3LAC includes 1591 AGNs located at high Galactic latitudes, |b| > 10 (with 28 duplicate associations, thus corresponding to 1563 gamma-ray sources among 2192 sources in the 3FGL catalog), a 71% increase over the second catalog based on 2 years of data. A very large majority of these AGNs (98%) are blazars. About half of the newly detected blazars are of unknown type, i.e., they lack spectroscopic information of sufficient quality to determine the strength of their emission lines. The general properties of the 3LAC sample confirm previous findings from earlier catalogs, but some new subclasses (e.g., intermediate- and high-synchrotron-peaked FSRQs) have now been significantly detected.

  3. Evaluation of the Monotonic Lagrangian Grid and Lat-Long Grid for Air Traffic Management

    NASA Technical Reports Server (NTRS)

    Kaplan, Carolyn; Dahm, Johann; Oran, Elaine; Alexandrov, Natalia; Boris, Jay

    2011-01-01

    The Air Traffic Monotonic Lagrangian Grid (ATMLG) is used to simulate a 24 hour period of air traffic flow in the National Airspace System (NAS). During this time period, there are 41,594 flights over the United States, and the flight plan information (departure and arrival airports and times, and waypoints along the way) are obtained from an Federal Aviation Administration (FAA) Enhanced Traffic Management System (ETMS) dataset. Two simulation procedures are tested and compared: one based on the Monotonic Lagrangian Grid (MLG), and the other based on the stationary Latitude-Longitude (Lat- Long) grid. Simulating one full day of air traffic over the United States required the following amounts of CPU time on a single processor of an SGI Altix: 88 s for the MLG method, and 163 s for the Lat-Long grid method. We present a discussion of the amount of CPU time required for each of the simulation processes (updating aircraft trajectories, sorting, conflict detection and resolution, etc.), and show that the main advantage of the MLG method is that it is a general sorting algorithm that can sort on multiple properties. We discuss how many MLG neighbors must be considered in the separation assurance procedure in order to ensure a five-mile separation buffer between aircraft, and we investigate the effect of removing waypoints from aircraft trajectories. When aircraft choose their own trajectory, there are more flights with shorter duration times and fewer CD&R maneuvers, resulting in significant fuel savings.

  4. Increased neurovirulence and reactivation of the herpes simplex virus type 1 latency associated transcript (LAT) negative mutant dLAT2903 with a disrupted LAT miR-H2

    PubMed Central

    Jiang, Xianzhi; Brown, Don; Osorio, Nelson; Hsiang, Chinhui; BenMohamed, Lbachir; Wechsler, Steven L.

    2015-01-01

    At least six microRNAs (miRNAs) appear to be encoded by the latency associated transcript (LAT) of herpes simplex virus type 1 (HSV-1). The gene for ICP0, an important immediate early (IE) viral protein, is antisense to, and overlaps with, the region of LAT from which miRNA H2 (miR-H2) is derived. We recently reported that a mutant (McK-ΔH2) disrupted for miR-H2 on the wild type HSV-1 strain McKrae genomic background has increased ICP0 expression, increased neurovirulence, and slightly more rapid reactivation. We report here that HSV-1 mutants deleted for the LAT promoter nonetheless make significant amounts of miR-H2 during lytic tissue culture infection, presumably via readthrough transcription from an upstream promoter. To determine if miR-H2 might also play a role in the HSV-1 latency-reactivation cycle of a LAT negative mutant, we constructed dLAT-ΔH2, in which miR-H2 is disrupted in dLAT2903 without altering the predicted amino acid sequence of the overlapping ICP0 open reading frame. Similar to McK-ΔH2, dLAT-ΔH2 expressed more ICP0, was more neurovirulent, and had increased reactivation in the mouse TG explant induced reactivation model of HSV-1 compared to its parental virus. Interestingly, although the increased reactivation of McK-ΔH2 compared to its parental wt virus was subtle and only detected at very early times after explant TG induced reactivation, the increased reactivation of dLAT-ΔH2 compared to its dLAT2903 parental virus appeared more robust and was significantly increased even at late times after induction. These results confirm that miR-H2 plays a role in modulating the HSV-1 reactivation phenotype. PMID:26069184

  5. Limits on dark matter annihilation signals from the Fermi LAT 4-year measurement of the isotropic gamma-ray background

    DOE PAGES

    Ackermann, M.

    2015-09-02

    We search for evidence of dark matter (DM) annihilation in the isotropic gamma-ray background (IGRB) measured with 50 months of Fermi Large Area Telescope (LAT) observations. An improved theoretical description of the cosmological DM annihilation signal, based on two complementary techniques and assuming generic weakly interacting massive particle (WIMP) properties, renders more precise predictions compared to previous work. More specifically, we estimate the cosmologically-induced gamma-ray intensity to have an uncertainty of a factor ~ 20 in canonical setups. We consistently include both the Galactic and extragalactic signals under the same theoretical framework, and study the impact of the former onmore » the IGRB spectrum derivation. We find no evidence for a DM signal and we set limits on the DM-induced isotropic gamma-ray signal. Our limits are competitive for DM particle masses up to tens of TeV and, indeed, are the strongest limits derived from Fermi LAT data at TeV energies. This is possible thanks to the new Fermi LAT IGRB measurement, which now extends up to an energy of 820 GeV. As a result, we quantify uncertainties in detail and show the potential this type of search offers for testing the WIMP paradigm with a complementary and truly cosmological probe of DM particle signals.« less

  6. Searches for correlation between UHECR events and high-energy gamma-ray Fermi-LAT data

    NASA Astrophysics Data System (ADS)

    Álvarez, Ezequiel; Cuoco, Alessandro; Mirabal, Nestor; Zaharijas, Gabrijela

    2016-12-01

    The astrophysical sources responsible for ultra high-energy cosmic rays (UHECRs) continue to be one of the most intriguing mysteries in astrophysics. We present a comprehensive search for correlations between high-energy (gtrsim 1 GeV) gamma-ray events from the Fermi Large Area Telescope (LAT) and UHECRs (gtrsim 60 EeV) detected by the Telescope Array and the Pierre Auger Observatory. We perform two separate searches. First, we conduct a standard cross-correlation analysis between the arrival directions of 148 UHECRs and 360 gamma-ray sources in the Second Catalog of Hard Fermi-LAT sources (2FHL). Second, we search for a possible correlation between UHECR directions and unresolved Fermi-LAT gamma-ray emission. For the latter, we use three different methods: a stacking technique with both a model-dependent and model-independent background estimate, and a cross-correlation function analysis. We also test for statistically significant excesses in gamma rays from signal regions centered on Cen A and the Telescope Array hotspot. No significant correlation is found in any of the analyses performed, except a weak (lesssim 2σ) hint of signal with the correlation function method on scales ~ 1°. Upper limits on the flux of possible power-law gamma-ray sources of UHECRs are derived.

  7. Limits on dark matter annihilation signals from the Fermi LAT 4-year measurement of the isotropic gamma-ray background

    SciTech Connect

    Ackermann, M.

    2015-09-02

    We search for evidence of dark matter (DM) annihilation in the isotropic gamma-ray background (IGRB) measured with 50 months of Fermi Large Area Telescope (LAT) observations. An improved theoretical description of the cosmological DM annihilation signal, based on two complementary techniques and assuming generic weakly interacting massive particle (WIMP) properties, renders more precise predictions compared to previous work. More specifically, we estimate the cosmologically-induced gamma-ray intensity to have an uncertainty of a factor ~ 20 in canonical setups. We consistently include both the Galactic and extragalactic signals under the same theoretical framework, and study the impact of the former on the IGRB spectrum derivation. We find no evidence for a DM signal and we set limits on the DM-induced isotropic gamma-ray signal. Our limits are competitive for DM particle masses up to tens of TeV and, indeed, are the strongest limits derived from Fermi LAT data at TeV energies. This is possible thanks to the new Fermi LAT IGRB measurement, which now extends up to an energy of 820 GeV. As a result, we quantify uncertainties in detail and show the potential this type of search offers for testing the WIMP paradigm with a complementary and truly cosmological probe of DM particle signals.

  8. Limits on dark matter annihilation signals from the Fermi LAT 4-year measurement of the isotropic gamma-ray background

    SciTech Connect

    Collaboration: Fermi LAT Collaboration

    2015-09-01

    We search for evidence of dark matter (DM) annihilation in the isotropic gamma-ray background (IGRB) measured with 50 months of Fermi Large Area Telescope (LAT) observations. An improved theoretical description of the cosmological DM annihilation signal, based on two complementary techniques and assuming generic weakly interacting massive particle (WIMP) properties, renders more precise predictions compared to previous work. More specifically, we estimate the cosmologically-induced gamma-ray intensity to have an uncertainty of a factor ∼ 20 in canonical setups. We consistently include both the Galactic and extragalactic signals under the same theoretical framework, and study the impact of the former on the IGRB spectrum derivation. We find no evidence for a DM signal and we set limits on the DM-induced isotropic gamma-ray signal. Our limits are competitive for DM particle masses up to tens of TeV and, indeed, are the strongest limits derived from Fermi LAT data at TeV energies. This is possible thanks to the new Fermi LAT IGRB measurement, which now extends up to an energy of 820 GeV. We quantify uncertainties in detail and show the potential this type of search offers for testing the WIMP paradigm with a complementary and truly cosmological probe of DM particle signals.

  9. The LATS2 tumor suppressor inhibits SREBP and suppresses hepatic cholesterol accumulation.

    PubMed

    Aylon, Yael; Gershoni, Anat; Rotkopf, Ron; Biton, Inbal E; Porat, Ziv; Koh, Anna P; Sun, Xiaochen; Lee, Youngmin; Fiel, Maria-Isabel; Hoshida, Yujin; Friedman, Scott L; Johnson, Randy L; Oren, Moshe

    2016-04-01

    The Hippo signaling pathway is a major regulator of organ size. In the liver, Hippo pathway deregulation promotes hyperplasia and hepatocellular carcinoma primarily through hyperactivation of its downstream effector, YAP. The LATS2 tumor suppressor is a core member of the Hippo pathway. A screen for LATS2-interacting proteins in liver-derived cells identified the transcription factor SREBP2, master regulator of cholesterol homeostasis. LATS2 down-regulation caused SREBP activation and accumulation of excessive cholesterol. Likewise, mice harboring liver-specific Lats2 conditional knockout (Lats2-CKO) displayed constitutive SREBP activation and overexpressed SREBP target genes and developed spontaneous fatty liver disease. Interestingly, the impact of LATS2 depletion on SREBP-mediated transcription was clearly distinct from that of YAP overexpression. When challenged with excess dietary cholesterol, Lats2-CKO mice manifested more severe liver damage than wild-type mice. Surprisingly, apoptosis, inflammation, and fibrosis were actually attenuated relative to wild-type mice, in association with impaired p53 activation. Subsequently, Lats2-CKO mice failed to recover effectively from cholesterol-induced damage upon return to a normal diet. Additionally, decreased LATS2 mRNA in association with increased SREBP target gene expression was observed in a subset of human nonalcoholic fatty liver disease cases. Together, these findings further highlight the tight links between tumor suppressors and metabolic homeostasis.

  10. The LATS2 tumor suppressor inhibits SREBP and suppresses hepatic cholesterol accumulation

    PubMed Central

    Aylon, Yael; Gershoni, Anat; Rotkopf, Ron; Biton, Inbal E.; Porat, Ziv; Koh, Anna P.; Sun, Xiaochen; Lee, Youngmin; Fiel, Maria-Isabel; Hoshida, Yujin; Friedman, Scott L.; Johnson, Randy L.; Oren, Moshe

    2016-01-01

    The Hippo signaling pathway is a major regulator of organ size. In the liver, Hippo pathway deregulation promotes hyperplasia and hepatocellular carcinoma primarily through hyperactivation of its downstream effector, YAP. The LATS2 tumor suppressor is a core member of the Hippo pathway. A screen for LATS2-interacting proteins in liver-derived cells identified the transcription factor SREBP2, master regulator of cholesterol homeostasis. LATS2 down-regulation caused SREBP activation and accumulation of excessive cholesterol. Likewise, mice harboring liver-specific Lats2 conditional knockout (Lats2-CKO) displayed constitutive SREBP activation and overexpressed SREBP target genes and developed spontaneous fatty liver disease. Interestingly, the impact of LATS2 depletion on SREBP-mediated transcription was clearly distinct from that of YAP overexpression. When challenged with excess dietary cholesterol, Lats2-CKO mice manifested more severe liver damage than wild-type mice. Surprisingly, apoptosis, inflammation, and fibrosis were actually attenuated relative to wild-type mice, in association with impaired p53 activation. Subsequently, Lats2-CKO mice failed to recover effectively from cholesterol-induced damage upon return to a normal diet. Additionally, decreased LATS2 mRNA in association with increased SREBP target gene expression was observed in a subset of human nonalcoholic fatty liver disease cases. Together, these findings further highlight the tight links between tumor suppressors and metabolic homeostasis. PMID:27013235

  11. Alpha mating type-specific expression of mutations leading to constitutive agglutinability in Saccharomyces cerevisiae.

    PubMed Central

    Doi, S; Yoshimura, M

    1985-01-01

    Two mutants of Saccharomyces cerevisiae have been isolated and characterized. The mutants were constitutively agglutinable at 36 degrees C, the temperature at which wild-type cells agglutinate only after induction by mating pheromone. The mutant cells had other properties specific for the normal alpha cell type, i.e., conjugation with a cells, response to a mating pheromone, and production of alpha mating pheromone. The two mutations, cag1 and cag2, were recessive and expressed only in alpha cells. cag1 is linked very closely to the MAT locus, but cag2 is unlinked to the MAT locus. These cag mutations complemented ste3-1. These results indicate that CAG genes are novel alpha-specific genes involved in the regulation of sex agglutinin synthesis. PMID:3881403

  12. Lead isotopic studies of lunar soils - Their bearing on the time scale of agglutinate formation

    NASA Technical Reports Server (NTRS)

    Church, S. E.; Tilton, G. R.; Chen, J. H.

    1976-01-01

    Fines (smaller than 75 microns) and bulk soil were studied to analyze loss of volatile lead; losses of the order of 10% to 30% radiogenic lead during the production of agglutinates are assessed. Lead isotope data from fine-agglutinate pairs are analyzed for information on the time scale of micrometeorite bombardment, from the chords generated by the data in concordia diagrams. Resulting mean lead loss ages were compared to spallogenic gas exposure ages for all samples. Labile parentless radiogenic Pb residing preferentially on or in the fines is viewed as possibly responsible for aberrant lead loss ages. Bulk soils plot above the concordia curve (in a field of excess radiogenic Pb) for all samples with anomalous ages.

  13. The Life Cycle of Entzia, an Agglutinated Foraminifer from the Salt Marshes in Transylvania

    NASA Astrophysics Data System (ADS)

    Kaminski, Michael; Telespan, Andreea; Balc, Ramona; Filipescu, Sorin; Varga, Ildiko; Görög, Agnes

    2013-04-01

    The small salt marshes associated with Miocene salt domes in Transylvania are host to a variety of marine organisms, including communities of halophytic plants as well as an agglutinated foraminifer that is normally found in coastal salt marshes worldwide. Originally described as the species Entzia tetrastoma by Daday (1884), the foraminifer is more widely known by the name Jadammina macrescens (Brady, 1870). Because the genus name Entzia has priority over Jadammina, the valid name of this taxon is Entzia macrescens (Brady, 1870). In 2007, we discovered a living population of Entzia inhabiting a small salt marsh just outside the town of Turda in central Transylvania, only a kilometer from the famous Maria Theresa Salt Mine. This is the first discovery of a living population of Entzia in Transylvania since the species was originally described in 1884. To determine whether or not the specimens we found represent a breeding population, samples were collected from the marsh on a monthly basis over the span of a year. This species can be found among the roots of the halophytic plants, in the uppermost one or two centimeters of the mud. Sediment samples were preserved in Vodka with Rose Bengal to distinguish living and dead specimens, and examined quantitatively. To document the life cycle of the species the following metrics were carried out: test size, abundance, number of chambers, ratio between live and dead specimens, and the diameter of the proloculus. An increase in the mean diameter of specimens was found from October to December. However the mean diameter decreased again in January, which suggests that asexual reproduction had apparently taken place. Small specimens again appeared in March, when sexual reproduction is presumed to have taken place. The median proloculus diameter was smallest in April and May, but the monthly changes in mean proloculus size within the population over the span of a year are not significant. However, specimens with largest

  14. D-penicillamine prevents ram sperm agglutination by reducing the disulphide bonds of a copper-binding sperm protein.

    PubMed

    Leahy, T; Rickard, J P; Aitken, R J; de Graaf, S P

    2016-05-01

    Head-to-head agglutination of ram spermatozoa is induced by dilution in the Tyrode's capacitation medium with albumin, lactate and pyruvate (TALP) and ameliorated by the addition of the thiol d-penicillamine (PEN). To better understand the association and disassociation of ram spermatozoa, we investigated the mechanism of action of PEN in perturbing sperm agglutination. PEN acts as a chelator of heavy metals, an antioxidant and a reducing agent. Chelation is not the main mechanism of action, as the broad-spectrum chelator ethylenediaminetetraacetic acid and the copper-specific chelator bathocuproinedisulfonic acid were inferior anti-agglutination agents compared with PEN. Oxidative stress is also an unlikely mechanism of sperm association, as PEN was significantly more effective in ameliorating agglutination than the antioxidants superoxide dismutase, ascorbic acid, α-tocopherol and catalase. Only the reducing agents cysteine and DL-dithiothreitol displayed similar levels of non-agglutinated spermatozoa at 0 h compared with PEN but were less effective after 3 h of incubation (37 °C). The addition of 10 µM Cu(2+) to 250 µM PEN + TALP caused a rapid reversion of the motile sperm population from a non-agglutinated state to an agglutinated state. Other heavy metals (cobalt, iron, manganese and zinc) did not provoke such a strong response. Together, these results indicate that PEN prevents sperm association by the reduction of disulphide bonds on a sperm membrane protein that binds copper. ADAM proteins are possible candidates, as targeted inhibition of the metalloproteinase domain significantly increased the percentage of motile, non-agglutinated spermatozoa (52.0% ± 7.8) compared with TALP alone (10.6% ± 6.1).

  15. Amino acid transporter LAT3 is required for podocyte development and function.

    PubMed

    Sekine, Yuji; Nishibori, Yukino; Akimoto, Yoshihiro; Kudo, Akihiko; Ito, Noriko; Fukuhara, Daisuke; Kurayama, Ryota; Higashihara, Eiji; Babu, Ellappan; Kanai, Yoshikatsu; Asanuma, Katsuhiko; Nagata, Michio; Majumdar, Arindam; Tryggvason, Karl; Yan, Kunimasa

    2009-07-01

    LAT3 is a Na+-independent neutral l-amino acid transporter recently isolated from a human hepatocellular carcinoma cell line. Although liver, skeletal muscle, and pancreas are known to express LAT3, the tissue distribution and physiologic function of this transporter are not completely understood. Here, we observed that glomeruli express LAT3. Immunofluorescence, confocal microscopy, and immunoelectron microscopy revealed that LAT3 localizes to the apical plasma membrane of podocyte foot processes. In mice, starvation upregulated glomerular LAT3, phosphorylated AKT1, reconstituted the actin network, and elongated foot processes. In the fetal kidney, we observed intense LAT3 expression at the capillary loops stage of renal development. Finally, zebrafish morphants lacking lat3 function showed collapsed glomeruli with thickened glomerular basement membranes. Permeability studies of the glomerular filtration barrier in these zebrafish morphants demonstrated a disruption of selective glomerular permeability. Our data suggest that LAT3 may play a crucial role in the development and maintenance of podocyte structure and function by regulating protein synthesis and the actin cytoskeleton.

  16. Serine residues in the LAT adaptor are essential for TCR-dependent signal transduction.

    PubMed

    Martínez-Florensa, Mario; García-Blesa, Antonio; Yélamos, José; Muñoz-Suano, Alba; Domínguez-Villar, Margarita; Valdor, Rut; Alonso, Antonio; García-Cózar, Francisco; Aparicio, Pedro; Malissen, Bernard; Aguado, Enrique

    2011-01-01

    The adaptor protein LAT has a prominent role in the transduction of intracellular signals elicited by the TCR/CD3 complex. Upon TCR engagement, LAT becomes tyrosine-phosphorylated and thereby, recruits to the membrane several proteins implicated in the activation of downstream signaling pathways. However, little is known about the role of other conserved motifs present in the LAT sequence. Here, we report that the adaptor LAT contains several conserved serine-based motifs, which are essential for proper signal transduction through the TCR. Mutation of these serine motifs in the human T cell line Jurkat prevents proper calcium influx, MAPK activation, and IL-2 production in response to TCR/CD3 stimulation. Moreover, this mutant form of LAT has a reduced ability to bind to PLC-γ1 and SLP-76, although phosphorylation of tyrosine residues 132, 171, and 191 is not decreased, raising a possible role for the serine-based motifs of LAT for the binding of important partners. The functional role of LAT serine-based motifs in signal transduction could be mediated by an effect on tyrosine phosphorylation, as their mutation significantly diminishes the phosphorylation of tyrosine residue 226. In addition, these serine motifs seem to have a regulatory role, given that upon their mutation, ZAP-70 shows enhanced phosphorylation. Therefore, the LAT serine-based motifs likely regulate signaling pathways that are essential for T cell physiology.

  17. LAB/NTAL/Lat2: a force to be reckoned with in all leukocytes?

    PubMed

    Orr, Selinda J; McVicar, Daniel W

    2011-01-01

    LAB/NTAL/Lat2 is a transmembrane adaptor protein closely related to LAT. It is expressed in various myeloid and lymphoid cells, many of which also express LAT. Phosphorylation of LAB occurs following engagement of various ITAM- and non-ITAM-linked receptors and can play positive and negative roles following receptor engagement. LAT binds PLCγ directly, resulting in efficient Ca²+ flux and degranulation. However, LAB does not contain a PLCγ-binding motif and only binds PLCγ indirectly, possibly via Grb2, thereby resulting in suboptimal signaling. As LAT can signal more efficiently than LAB, competition between the 2 for space/substrates in the lipid rafts can attenuate signaling. This competition model requires coexpression of LAT; however, LAB is repressive, even in cells lacking substantial LAT expression such as macrophages and mature B cells. The reported interaction between LAB and the ubiquitin E3-ligase c-Cbl suggests 1 possible mechanism for LAT-independent inhibition by LAB, but such a model requires further investigation. Given the wide-reaching expression pattern of LAB, LAB has the ability to modulate signaling in virtually every type of leukocyte. Regardless of its ultimate mode of action, the potent regulatory capability of LAB proves this protein to be a complex adaptor that warrants continued, substantial scrutiny by biochemists and immunologists alike.

  18. Pulsars above 10 GeV: Fermi LAT Observations and Questions

    NASA Technical Reports Server (NTRS)

    Thomson, Dave

    2012-01-01

    The success of the Fermi Large Area Telescope in studying gamma-ray pulsars offers hints about future work above 10 GeV. The infrastructure for discovering pulsars will be similar between LAT and any future telescope. Some of the Fermi LAT results suggest intriguing questions about the future of high-energy pulsar studies.

  19. Fermi LAT Limits on Primordial Black Hole Evaporation

    NASA Astrophysics Data System (ADS)

    Johnson, Chistian; Malyshev, Dmitry; Funk, Stefan; Ritz, Steven; Fermi LAT Collaboration

    2017-01-01

    Primordial black holes (PBHs) of sufficiently small mass emit gamma rays in the Fermi Large Area Telescope (LAT) energy range. PBHs with lifetimes shorter than the Fermi observation time will appear as moving point sources with gamma-ray emission that becomes harder and brighter with time until the PBH completely evaporates. Previous searches for gamma rays from PBHs have focused on either short time scale bursts or the contribution of PBH bursts to the isotropic diffuse emission. Here we use Fermi LAT point source catalogs to search for PBH candidates that evaporate on a time scale of several years. In addition to looking for the spectral signatures of a PBH, we also develop an algorithm to detect proper motion. There are a few unassociated point sources with spectra consistent with PBH evaporation; however, none of these sources show significant proper motion. We derive a conservative limit on PBH evaporation rate in the vicinity of the Earth by using a threshold on the gamma-ray flux above 10 GeV such that there are no sources above this threshold with spectra consistent with Hawking radiation from PBHs. The derived limit is more stringent than the limits obtained with ground-based gamma-ray observatories.

  20. Analysis of Burst Observations by GLAST's LAT Detector

    NASA Technical Reports Server (NTRS)

    Band, David L.; Digel, Seth W.

    2003-01-01

    Analyzing data from GLAST's Large Area Telescope (LAT) will require sophisticated techniques. The PSF and effective area are functions of both photon energy and the position in the field-of-view. During most of the mission the observatory will survey the sky continuously and thus the LAT will detect each count from a source at a different detector orientation; each count requires its own response function! The likelihood as a function of celestial position and photon energy will be the foundation of the standard analysis techniques. However the 20 MeV-300 GeV emission at the time of the approx.100 keV burst emission (timescale of approx.10 s) can be isolated and analyzed because essentially no non-burst counts are expected within a PSF radius of the burst location during the burst. Both binned and unbinned (in energy) spectral fitting will be possible. Longer timescale afterglow emission will require the likelihood analysis that will be used for persistent sources.

  1. New genetic variants of LATS1 detected in urinary bladder and colon cancer

    PubMed Central

    Saadeldin, Mona K.; Shawer, Heba; Mostafa, Ahmed; Kassem, Neemat M.; Amleh, Asma; Siam, Rania

    2015-01-01

    LATS1, the large tumor suppressor 1 gene, encodes for a serine/threonine kinase protein and is implicated in cell cycle progression. LATS1 is down-regulated in various human cancers, such as breast cancer, and astrocytoma. Point mutations in LATS1 were reported in human sarcomas. Additionally, loss of heterozygosity of LATS1 chromosomal region predisposes to breast, ovarian, and cervical tumors. In the current study, we investigated LATS1 genetic variations including single nucleotide polymorphisms (SNPs), in 28 Egyptian patients with either urinary bladder or colon cancers. The LATS1 gene was amplified and sequenced and the expression of LATS1 at the RNA level was assessed in 12 urinary bladder cancer samples. We report, the identification of a total of 29 variants including previously identified SNPs within LATS1 coding and non-coding sequences. A total of 18 variants were novel. Majority of the novel variants, 13, were mapped to intronic sequences and un-translated regions of the gene. Four of the five novel variants located in the coding region of the gene, represented missense mutations within the serine/threonine kinase catalytic domain. Interestingly, LATS1 RNA steady state levels was lost in urinary bladder cancerous tissue harboring four specific SNPs (16045 + 41736 + 34614 + 56177) positioned in the 5′UTR, intron 6, and two silent mutations within exon 4 and exon 8, respectively. This study identifies novel single-base-sequence alterations in the LATS1 gene. These newly identified variants could potentially be used as novel diagnostic or prognostic tools in cancer. PMID:25628642

  2. Increased neurovirulence and reactivation of the herpes simplex virus type 1 latency-associated transcript (LAT)-negative mutant dLAT2903 with a disrupted LAT miR-H2.

    PubMed

    Jiang, Xianzhi; Brown, Don; Osorio, Nelson; Hsiang, Chinhui; BenMohamed, Lbachir; Wechsler, Steven L

    2016-02-01

    At least six microRNAs (miRNAs) appear to be encoded by the latency-associated transcript (LAT) of herpes simplex virus type 1 (HSV-1). The gene for ICP0, an important immediate early (IE) viral protein, is anti-sense to, and overlaps with, the region of LAT from which miRNA H2 (miR-H2) is derived. We recently reported that a mutant (McK-ΔH2) disrupted for miR-H2 on the wild-type HSV-1 strain McKrae genomic background has increased ICP0 expression, increased neurovirulence, and slightly more rapid reactivation. We report here that HSV-1 mutants deleted for the LAT promoter nonetheless make significant amounts of miR-H2 during lytic tissue culture infection, presumably via readthrough transcription from an upstream promoter. To determine if miR-H2 might also play a role in the HSV-1 latency/reactivation cycle of a LAT-negative mutant, we constructed dLAT-ΔH2, in which miR-H2 is disrupted in dLAT2903 without altering the predicted amino acid sequence of the overlapping ICP0 open reading frame. Similar to McK-ΔH2, dLAT-ΔH2 expressed more ICP0, was more neurovirulent, and had increased reactivation in the mouse TG explant-induced reactivation model of HSV-1 compared with its parental virus. Interestingly, although the increased reactivation of McK-ΔH2 compared with its parental wild-type (wt) virus was subtle and only detected at very early times after explant TG induced reactivation, the increased reactivation of dLAT-ΔH2 compared with its dLAT2903 parental virus appeared more robust and was significantly increased even at late times after induction. These results confirm that miR-H2 plays a role in modulating the HSV-1 reactivation phenotype.

  3. Oncogenicity of L-type amino-acid transporter 1 (LAT1) revealed by targeted gene disruption in chicken DT40 cells: LAT1 is a promising molecular target for human cancer therapy

    SciTech Connect

    Ohkawa, Mayumi; Ohno, Yoshiya; Masuko, Kazue; Takeuchi, Akiko; Suda, Kentaro; Kubo, Akihiro; Kawahara, Rieko; Okazaki, Shogo; Tanaka, Toshiyuki; Saya, Hideyuki; Seki, Masayuki; Enomoto, Takemi; Yagi, Hideki; Hashimoto, Yoshiyuki; Masuko, Takashi

    2011-03-25

    Highlights: {yields} We established LAT1 amino-acid transporter-disrupted DT40 cells. {yields} LAT1-disrupted cells showed slow growth and lost the oncogenicity. {yields} siRNA and mAb inhibited human tumor growth in vitro and in vivo. {yields} LAT1 is a promising target molecule for cancer therapy. -- Abstract: L-type amino-acid transporter 1 (LAT1) is the first identified light chain of CD98 molecule, disulfide-linked to a heavy chain of CD98. Following cDNA cloning of chicken full-length LAT1, we have constructed targeting vectors for the disruption of chicken LAT1 gene from genomic DNA of chicken LAT1 consisting of 5.4 kb. We established five homozygous LAT1-disrupted (LAT1{sup -/-}) cell clones, derived from a heterozygous LAT1{sup +/-} clone of DT40 chicken B cell line. Reactivity of anti-chicken CD98hc monoclonal antibody (mAb) with LAT1{sup -/-} DT40 cells was markedly decreased compared with that of wild-type DT40 cells. All LAT1{sup -/-} cells were deficient in L-type amino-acid transporting activity, although alternative-splice variant but not full-length mRNA of LAT1 was detected in these cells. LAT1{sup -/-} DT40 clones showed outstandingly slow growth in liquid culture and decreased colony-formation capacity in soft agar compared with wild-type DT40 cells. Cell-cycle analyses indicated that LAT1{sup -/-} DT40 clones have prolonged cell-cycle phases compared with wild-type or LAT1{sup +/-} DT40 cells. Knockdown of human LAT1 by small interfering RNAs resulted in marked in vitro cell-growth inhibition of human cancer cells, and in vivo tumor growth of HeLa cells in athymic mice was significantly inhibited by anti-human LAT1 mAb. All these results indicate essential roles of LAT1 in the cell proliferation and occurrence of malignant phenotypes and that LAT1 is a promising candidate as a molecular target of human cancer therapy.

  4. Nanoscale Mineralogy and Composition of Experimental Regolith Agglutinates Produced under Asteroidal Impact Conditions

    NASA Technical Reports Server (NTRS)

    Christoffersen, Roy; Cintala, M. J.; Keller, L. P.; See, T. H.; Horz, F.

    2013-01-01

    On the Moon, the energetics of smaller impactors and the physical/chemical characteristics of the granular regolith target combine to form a key product of lunar space weathering: chemically reduced shock melts containing optically-active nanophase Fe metal grains (npFe0) [1]. In addition to forming the optically dark glassy matrix phase in lunar agglutinitic soil particles [1], these shock melts are becoming increasingly recognized for their contribution to optically active patina coatings on a wide range of exposed rock and grain surfaces in the lunar regolith [2]. In applying the lessons of lunar space weathering to asteroids, the potential similarities and differences in regolith-hosted shock melts on the Moon compared to those on asteroids has become a topic of increasing interest [3,4]. In a series of impact experiments performed at velocities applicable to the asteroid belt [5], Horz et al. [6] and See and Horz [7] have previously shown that repeated impacts into a gabbroic regolith analog target can produce melt-welded grain aggregates morphologically very similar to lunar agglutinates [6,7]. Although these agglutinate-like particles were extensively analyzed by electron microprobe and scanning electron microscopy (SEM) as part of the original study [7], a microstructural and compositional comparison of these aggregates to lunar soil agglutinates at sub-micron scales has yet to be made. To close this gap, we characterized a representative set of these aggregates using a JEOL 7600 field-emission scanning electron microscope (FE-SEM), and JEOL 2500SE field-emission scanning transmission electron microscope (FE-STEM) both optimized for energy dispersive X-ray spectroscopy (EDX) compositional spectrum imaging at respective analytical spatial resolutions of 0.5 to 1 micron, and 2 to 4 nm.

  5. High influx of carbon in walls of agglutinated foraminifers during the Permian-Triassic transition in global oceans

    USGS Publications Warehouse

    Nestell, Galina P.; Nestell, Merlynd K.; Ellwood, Brooks B.; Wardlaw, Bruce R.; Basu, Asish R.; Ghosh, Nilotpal; Phuong Lan, Luu Thi; Rowe, Harry D.; Hunt, Andrew G.; Tomkin, Jonathan H.; Ratcliffe, Kenneth T.

    2015-01-01

    The Permian–Triassic mass extinction is postulated to be related to the rapid volcanism that produced the Siberian flood basalt (Traps). Unrelated volcanic eruptions producing several episodes of ash falls synchronous with the Siberian Traps are found in South China and Australia. Such regional eruptions could have caused wildfires, burning of coal deposits, and the dispersion of coal fly ash. These eruptions introduced a major influx of carbon into the atmosphere and oceans that can be recognized in the wallstructure of foraminiferal tests present in survival populations in the boundary interval strata. Analysis of free specimens of foraminifers recovered from residues of conodont samples taken at aPermian–Triassic boundary section at Lung Cam in northern Vietnam has revealed the presence of a significant amount of elemental carbon, along with oxygen and silica, in their test wall structure, but an absence of calcium carbonate. These foraminifers, identified as Rectocornuspira kalhori, Cornuspira mahajeri, and Earlandia spp. and whose tests previously were considered to be calcareous, are confirmed to be agglutinated, and are now referred to as Ammodiscus kalhori and Hyperammina deformis. Measurement of the 207Pb/204Pb ratios in pyrite clusters attached to the foraminiferal tests confirmed that these tests inherited the Pb in their outer layer from carbon-contaminated seawater. We conclude that the source of the carbon could have been either global coal fly ash or forest fire-dispersed carbon, or a combination of both, that was dispersed into the Palaeo-Tethys Ocean immediately after the end-Permian extinction event.

  6. [Comparative measurement of antithrombin III by latex agglutination and radial immunodiffusion in patients with peritonitis].

    PubMed

    Miagkova, M A; Aleshkin, A V; Abramenko, T V; Savitskaia, Iu A; Aleshkin, V A

    1997-01-01

    A highly sensitive and rapid method, based on latex agglutination, has been developed for measuring antithrombin III (AT III) in the blood serum of patients and donors. The sensitivity of analysis is 0.6 microgram/ml, time 2 to 3 min. The method is simple, requires no sophisticated equipment, and may be used under field conditions. The results are assessed visually. Immunochemical reagents have been synthesized for the method: latex conjugates and specific antibodies to AT III. The method was tried in patients with peritonitis. An additional criterion for diagnosing the respiratory distress syndrome of adults in this patient population has been developed.

  7. Changing Horses in Midstream: Fermi LAT Computing and SCons

    NASA Astrophysics Data System (ADS)

    Bogart, J. R.; Golpayegani, N.

    2011-07-01

    (For the Fermi LAT Collaboration) Several years into GLAST (now Fermi) offline software development it became evident we would need a replacement for our original build system, the Configuration Management Tool (CMT) developed at CERN, in order to support Mac users and to keep pace with newer compilers and operating system versions on our traditional platforms, Linux and Windows. The open source product SCons emerged as the only viable alternative and development began in earnest several months before Fermi's successful launch in June of 2008. Over two years later the conversion is nearing completion. This paper describes the conversion to and our use of SCons, concentrating on the resulting environment for users and developers and how it was achieved. Topics discussed include SCons and its interaction with Fermi code, GoGui, a cross-platform gui for Fermi developers, and issues specific to Windows developer support.

  8. Stabilization of a prokaryotic LAT transporter by random mutagenesis

    PubMed Central

    Rodríguez-Banqueri, Arturo; Errasti-Murugarren, Ekaitz; Bartoccioni, Paola; Kowalczyk, Lukasz; Perálvarez-Marín, Alex

    2016-01-01

    The knowledge of three-dimensional structures at atomic resolution of membrane transport proteins has improved considerably our understanding of their physiological roles and pathological implications. However, most structural biology techniques require an optimal candidate within a protein family for structural determination with (a) reasonable production in heterologous hosts and (b) good stability in detergent micelles. SteT, the Bacillus subtilis l-serine/l-threonine exchanger is the best-known prokaryotic paradigm of the mammalian l–amino acid transporter (LAT) family. Unfortunately, SteT’s lousy stability after extracting from the membrane prevents its structural characterization. Here, we have used an approach based on random mutagenesis to engineer stability in SteT. Using a split GFP complementation assay as reporter of protein expression and membrane insertion, we created a library of 70 SteT mutants each containing random replacements of one or two residues situated in the transmembrane domains. Analysis of expression and monodispersity in detergent of this library permitted the identification of evolved versions of SteT with a significant increase in both expression yield and stability in detergent with respect to wild type. In addition, these experiments revealed a correlation between the yield of expression and the stability in detergent micelles. Finally, and based on protein delipidation and relipidation assays together with transport experiments, possible mechanisms of SteT stabilization are discussed. Besides optimizing a member of the LAT family for structural determination, our work proposes a new approach that can be used to optimize any membrane protein of interest. PMID:26976827

  9. Production of free glutamate in milk requires the leucine transporter LAT1.

    PubMed

    Matsumoto, Takuya; Nakamura, Eiji; Nakamura, Hidehiro; Hirota, Mariko; San Gabriel, Ana; Nakamura, Ken-Ichiro; Chotechuang, Nattida; Wu, Guoyao; Uneyama, Hisayuki; Torii, Kunio

    2013-09-15

    The concentration of free glutamate (Glu) in rat's milk is ∼10 times higher than that in plasma. Previous work has shown that mammary tissue actively transports circulatory leucine (Leu), which is transaminated to synthesize other amino acids such as Glu and aspartate (Asp). To investigate the molecular basis of Leu transport and its conversion into Glu in the mammary gland, we characterized the expression of Leu transporters and [(3)H]Leu uptake in rat mammary cells. Gene expression analysis indicated that mammary cells express two Leu transporters, LAT1 and LAT2, with LAT1 being more abundant than LAT2. This transport system is sodium independent and transports large neutral amino acids. The Leu transport system in isolated rat mammary cells could be specifically blocked by the LAT1 inhibitors 2-aminobicyclo-[2.2.1]-heptane-2-carboxylic acid (BCH) and triiodothyronine (T3). In organ cultures, Glu secretion was markedly inhibited by these LAT1 inhibitors. Furthermore, the profiles of Leu uptake inhibition by amino acids in mammary cells were similar to those reported for LAT1. In vivo, concentrations of free Glu and Asp increased in milk by oral gavage with Leu at 6, 12, and 18 days of lactation. These results indicate that the main Leu transporter in mammary tissue is LAT1 and the transport of Leu is a limiting factor for the synthesis and release of Glu and Asp into milk. Our studies provide the bases for the molecular mechanism of Leu transport in mammary tissue by LAT1 and its active role on free Glu secretion in milk, which confer umami taste in suckling pups.

  10. Cerebral cortex hyperthyroidism of newborn mct8-deficient mice transiently suppressed by lat2 inactivation.

    PubMed

    Núñez, Bárbara; Martínez de Mena, Raquel; Obregon, Maria Jesus; Font-Llitjós, Mariona; Nunes, Virginia; Palacín, Manuel; Dumitrescu, Alexandra M; Morte, Beatriz; Bernal, Juan

    2014-01-01

    Thyroid hormone entry into cells is facilitated by transmembrane transporters. Mutations of the specific thyroid hormone transporter, MCT8 (Monocarboxylate Transporter 8, SLC16A2) cause an X-linked syndrome of profound neurological impairment and altered thyroid function known as the Allan-Herndon-Dudley syndrome. MCT8 deficiency presumably results in failure of thyroid hormone to reach the neural target cells in adequate amounts to sustain normal brain development. However during the perinatal period the absence of Mct8 in mice induces a state of cerebral cortex hyperthyroidism, indicating increased brain access and/or retention of thyroid hormone. The contribution of other transporters to thyroid hormone metabolism and action, especially in the context of MCT8 deficiency is not clear. We have analyzed the role of the heterodimeric aminoacid transporter Lat2 (Slc7a8), in the presence or absence of Mct8, on thyroid hormone concentrations and on expression of thyroid hormone-dependent cerebral cortex genes. To this end we generated Lat2-/-, and Mct8-/yLat2-/- mice, to compare with wild type and Mct8-/y mice during postnatal development. As described previously the single Mct8 KO neonates had a transient increase of 3,5,3'-triiodothyronine concentration and expression of thyroid hormone target genes in the cerebral cortex. Strikingly the absence of Lat2 in the double Mct8Lat2 KO prevented the effect of Mct8 inactivation in newborns. The Lat2 effect was not observed from postnatal day 5 onwards. On postnatal day 21 the Mct8 KO displayed the typical pattern of thyroid hormone concentrations in plasma, decreased cortex 3,5,3'-triiodothyronine concentration and Hr expression, and concomitant Lat2 inactivation produced little to no modifications. As Lat2 is expressed in neurons and in the choroid plexus, the results support a role for Lat2 in the supply of thyroid hormone to the cerebral cortex during early postnatal development.

  11. Searching for Dark Matter Signatures in the GLAST LAT Electron Flux

    NASA Technical Reports Server (NTRS)

    Moiseev, Alexander; Profumo, Stefano

    2008-01-01

    We explored several viable scenarios of how LAT might observe DM, when the spectral feature is predicted to be observed in the HE electron flux It has been demonstrated elsewhere that LAT will be capable to detect HE electrons flux in energy range from 20 GeV to - 1 TeV with 520% energy resolution and good statistics If there is a DM-caused feature in the HE electron flux (in the range 20 GeV - 1 TeV), LAT will be the best current instrument to observe it!

  12. A Search for Cosmic-ray Proton Anisotropies with Fermi LAT

    NASA Astrophysics Data System (ADS)

    Meehan, Matthew; Vandenbroucke, Justin; Fermi-LAT Collaboration

    2017-01-01

    In eight years of operation, the Fermi Large Area Telescope (LAT) has detected a large sample of cosmic-ray protons. The LAT's wide field of view and full-sky coverage make it an excellent instrument for studying anisotropies in the arrival directions of protons at all angular scales. These capabilities enable the LAT to make a full-sky 2D measurement of cosmic-ray proton anisotropy complementary to many recent TeV measurements, which are performed by projecting onto right ascension. Any detected anisotropies probe the structure of the local interstellar magnetic field and could indicate the presence of a nearby source

  13. Expanding the Gamma-ray Universe: High Redshift Fermi-LAT Blazars

    NASA Astrophysics Data System (ADS)

    Ojha, Roopesh; Paliya, Vaidehi; Gasparrini, Dario; Ajello, Marco; Cutini, Sara; Fermi-LAT Collaboration

    2017-01-01

    High-redshift blazars detected by the Fermi Large Area Telescope (LAT) are of great astrophysical import as they are extreme objects whose energetics remain a mystery. Such blazars are intrinsically interesting since they inform us about the evolution of gamma-ray blazars and are, by definition, some of the more luminous blazars in the Fermi-LAT sample. These blazars appear to host very massive black holes and could shed light on the origin and growth of black holes in the early Universe. We present the latest high redshift blazar detections in the LAT and discuss some of their implications.

  14. A Possible Role for Agglutinated Foraminifers in the Growth of Deep-Water Coral Bioherms

    NASA Astrophysics Data System (ADS)

    Messing, C. G.; Reed, J. K.; Brooke, S. D.

    2008-05-01

    Exploration of deep-water bioherms dominated by the scleractinian corals Lophelia pertusa and Enallopsammia profunda along the east coast of Florida in ~400-800 m depth reveals an often dense and rich assemblage of small (~1-30 mm) epifauna on dead coral branches, which is often dominated by agglutinated astrorhizacean foraminifers accompanied by thecate and athecate hydroids, sponges, stylasterids, anemones and barnacles. The dominant agglutinated foraminifer is an arborescent form up to 15 mm tall, consisting of a basal tube that gives rise to branchlets of successively decreasing diameter and thickly coated with fine-grained material including coccoliths and diatom frustules. The large numbers of foraminifers generate an enormous adhesive, sediment-trapping surface area and may represent an important accelerated route for sediment deposition and bioherm growth relative to baffling of suspended sediment particles by the coral branches themselves. These foraminifers also occur on still living coral, suggesting that they may either contribute to coral death or invade stressed colonies. They may thus be responsible for or contribute to the small percent of living corals observed in many of these habitats. Other epifauna appear to colonize after the coral has died.

  15. Ethanol induces human red cell shape transformations and enhanced ligand-mediated agglutinability

    SciTech Connect

    Weinstein, R.S.; McLawhon, R.W.; Marikovsky, Y.

    1986-03-01

    Ethanol concentrations are markedly elevated in rat stomach wall when ulcerogenic doses of 100 % ethanol (2 ml for 5 to 10 minutes) are instilled in rat gastric lumen. The authors observed that red cells in gastric mucosal postcapillary venules become spiculated and interadherent under these conditions. The authors have now studied this phenomenon in vitro using washing human red cells. Concentrations of high grade ethanol ranging from 2 to 10% (v/v) in physiological buffered saline (pH 7.3) without Ca/sup + +/ or Mg/sup + +/ at 25/sup 0/C rapidly transformed human red cells into spiculated forms. 2% ethanol transformed human red cells into disco-echinocytes in 15 min. whereas 10% ethanol transformed red blood cells into echinocytes within 3 min. Washing out of ethanol at 1 hour reverted the echinocytes into discocytes. However, following 3 hours of incubation in 10% ethanol washing out of ethanol produced stomatocytes. The ethanol-induced echinocytic shape transformations were accompanied by a dose-related increase in red cell agglutinability with poly-L-lysine or the plant lectin wheat germ agglutinin. The enhanced agglutinability was reversed by restoring the red cell shape changes and alterations in surface properties may play a role in the pathogenesis of ethanol-induced gastric ulcers.

  16. High Bacterial Agglutination Activity in a Single-CRD C-Type Lectin from Spodoptera exigua (Lepidoptera: Noctuidae)

    PubMed Central

    Gasmi, Leila; Ferré, Juan; Herrero, Salvador

    2017-01-01

    Lectins are carbohydrate-interacting proteins that play a pivotal role in multiple physiological and developmental aspects of all organisms. They can specifically interact with different bacterial and viral pathogens through carbohydrate-recognition domains (CRD). In addition, lectins are also of biotechnological interest because of their potential use as biosensors for capturing and identifying bacterial species. In this work, three C-type lectins from the Lepidoptera Spodoptera exigua were produced as recombinant proteins and their bacterial agglutination properties were characterized. The lowest protein concentration producing bacterial agglutination against a panel of different Gram+ and Gram− as well as their carbohydrate binding specificities was determined for the three lectins. One of these lectins, BLL2, was able to agglutinate cells from a broad range of bacterial species at an extremely low concentration, becoming a very interesting protein to be used as a biosensor or for other biotechnological applications involving bacterial capture. PMID:28257054

  17. High Bacterial Agglutination Activity in a Single-CRD C-Type Lectin from Spodoptera exigua (Lepidoptera: Noctuidae).

    PubMed

    Gasmi, Leila; Ferré, Juan; Herrero, Salvador

    2017-03-01

    Lectins are carbohydrate-interacting proteins that play a pivotal role in multiple physiological and developmental aspects of all organisms. They can specifically interact with different bacterial and viral pathogens through carbohydrate-recognition domains (CRD). In addition, lectins are also of biotechnological interest because of their potential use as biosensors for capturing and identifying bacterial species. In this work, three C-type lectins from the Lepidoptera Spodoptera exigua were produced as recombinant proteins and their bacterial agglutination properties were characterized. The lowest protein concentration producing bacterial agglutination against a panel of different Gram+ and Gram- as well as their carbohydrate binding specificities was determined for the three lectins. One of these lectins, BLL2, was able to agglutinate cells from a broad range of bacterial species at an extremely low concentration, becoming a very interesting protein to be used as a biosensor or for other biotechnological applications involving bacterial capture.

  18. NEW FERMI-LAT EVENT RECONSTRUCTION REVEALS MORE HIGH-ENERGY GAMMA RAYS FROM GAMMA-RAY BURSTS

    SciTech Connect

    Atwood, W. B.; Baldini, L.; Bregeon, J.; Pesce-Rollins, M.; Sgro, C.; Tinivella, M.; Bruel, P.; Cohen-Tanugi, J.; Granot, J.; Longo, F.; Razzaque, S.; Zimmer, S. E-mail: nicola.omodei@stanford.edu

    2013-09-01

    Based on the experience gained during the four and a half years of the mission, the Fermi-LAT Collaboration has undertaken a comprehensive revision of the event-level analysis going under the name of Pass 8. Although it is not yet finalized, we can test the improvements in the new event reconstruction with the special case of the prompt phase of bright gamma-ray bursts (GRBs), where the signal-to-noise ratio is large enough that loose selection cuts are sufficient to identify gamma rays associated with the source. Using the new event reconstruction, we have re-analyzed 10 GRBs previously detected by the Large Area Telescope (LAT) for which an X-ray/optical follow-up was possible and found four new gamma rays with energies greater than 10 GeV in addition to the seven previously known. Among these four is a 27.4 GeV gamma ray from GRB 080916C, which has a redshift of 4.35, thus making it the gamma ray with the highest intrinsic energy ({approx}147 GeV) detected from a GRB. We present here the salient aspects of the new event reconstruction and discuss the scientific implications of these new high-energy gamma rays, such as constraining extragalactic background light models, Lorentz invariance violation tests, the prompt emission mechanism, and the bulk Lorentz factor of the emitting region.

  19. Identification of serum component involved in generation of neo-lectin with agglutinating and phenoloxidase activities in human serum.

    PubMed

    Manikandan, Beulaja; Ramar, Manikandan; Munusamy, Arumugam

    2014-01-01

    Human serum albumin (HSA) was identified as the component involved in generation of neo-lectin molecules with both lectin and phenoloxidase activities. Pronase treated HSA was able to agglutinate hen RBC and oxidize hydroquinone. Sodium dodecyl sulphate (SDS) treated HSA agglutinated both hen and sheep RBC as well as oxidized dopamine. The hemagglutinating activities of pronase/SDS treated HSA observed against hen RBC were dosimetric. The oxidation of pronase/SDS treated HSA with hydroquinone/dopamine, respectively, was inhibitable by inhibitors of phenoloxidase, namely, phenylthiourea and tropolone. Very low concentrations of HSA could generate these humoral neo-lectin molecules.

  20. Structure-based ligand discovery for the Large-neutral Amino Acid Transporter 1, LAT-1

    PubMed Central

    Geier, Ethan G.; Schlessinger, Avner; Fan, Hao; Gable, Jonathan E.; Irwin, John J.; Sali, Andrej; Giacomini, Kathleen M.

    2013-01-01

    The Large-neutral Amino Acid Transporter 1 (LAT-1)—a sodium-independent exchanger of amino acids, thyroid hormones, and prescription drugs—is highly expressed in the blood–brain barrier and various types of cancer. LAT-1 plays an important role in cancer development as well as in mediating drug and nutrient delivery across the blood–brain barrier, making it a key drug target. Here, we identify four LAT-1 ligands, including one chemically novel substrate, by comparative modeling, virtual screening, and experimental validation. These results may rationalize the enhanced brain permeability of two drugs, including the anticancer agent acivicin. Finally, two of our hits inhibited proliferation of a cancer cell line by distinct mechanisms, providing useful chemical tools to characterize the role of LAT-1 in cancer metabolism. PMID:23509259

  1. Growth and properties of novel organic nonlinear optical crystal: L-alaninium tartrate (LAT)

    NASA Astrophysics Data System (ADS)

    Vimalan, M.; Kumar, T. Rajesh; Tamilselvan, S.; Sagayaraj, P.; Mahadevan, C. K.

    2010-09-01

    A new organic nonlinear optical crystal L-alaninium tartrate (LAT) has been grown by slow evaporation method at room temperature. Single crystal X-ray diffraction studies reveal that the crystal has monoclinic structure with space group P2 1. From FT-IR spectrum, the CH vibrations of tartaric acid generate peaks at 2977 and 2960 cm -1. The thermal studies indicate that the grown LAT is stable up to 118 °C, SHG measurements and UV-Vis-NIR spectroscopy. Photoconductivity studies of LAT reveal its negative photoconducting nature. The second harmonic generation efficiency of LAT crystal is found to be 174 mV. The laser damage threshold is found to be 8.16 GW/cm 2. The dielectric constant and dielectric loss of the crystal were studied as a function of frequency and the results are discussed. The AC/DC conductivity studies are carried out and reported for the first time.

  2. Fermi-LAT detection of the Galactic nova TCP J18102829-2729590

    NASA Astrophysics Data System (ADS)

    Li, Kwan-Lok; Chomiuk, Laura

    2016-11-01

    Fermi-LAT detection of the Galactic nova TCP J18102829-2729590 Following the discovery of the nova in Sagittarius TCP J18102829-2729590 (CBAT 2016 10 20.383; ATel #9658), we triggered an one-week Fermi ToO (observation number: 090603-1-1; PI: Laura Chomiuk) from 2016-10-25 as part of our Fermi-LAT monitoring campaign for Galactic novae (ATel #9311).

  3. Monoterpene Glycoside ESK246 from Pittosporum Targets LAT3 Amino Acid Transport and Prostate Cancer Cell Growth

    PubMed Central

    2014-01-01

    The l-type amino acid transporter (LAT) family consists of four members (LAT1–4) that mediate uptake of neutral amino acids including leucine. Leucine is not only important as a building block for proteins, but plays a critical role in mTORC1 signaling leading to protein translation. As such, LAT family members are commonly upregulated in cancer in order to fuel increased protein translation and cell growth. To identify potential LAT-specific inhibitors, we established a function-based high-throughput screen using a prefractionated natural product library. We identified and purified two novel monoterpene glycosides, ESK242 and ESK246, sourced from a Queensland collection of the plant Pittosporum venulosum. Using Xenopus laevis oocytes expressing individual LAT family members, we demonstrated that ESK246 preferentially inhibits leucine transport via LAT3, while ESK242 inhibits both LAT1 and LAT3. We further show in LNCaP prostate cancer cells that ESK246 is a potent (IC50 = 8.12 μM) inhibitor of leucine uptake, leading to reduced mTORC1 signaling, cell cycle protein expression and cell proliferation. Our study suggests that ESK246 is a LAT3 inhibitor that can be used to study LAT3 function and upon which new antiprostate cancer therapies may be based. PMID:24762008

  4. Kinematic and electromyographic comparisons between chin-ups and lat-pull down exercises.

    PubMed

    Doma, Kenji; Deakin, Glen B; Ness, Kevin F

    2013-09-01

    The purpose of this study was to compare kinematics and muscle activity between chin-ups and lat-pull down exercises and between muscle groups during the two exercises. Normalized electromyography (EMG) of biceps brachii (BB), triceps brachii (TB), pectoralis major (PM), latissimus dorsi (LD), rectus abdominus (RA), and erector spinae (ES) and kinematics of back, shoulder, and seventh cervical vertebrae (C7) was analysed during chin-ups and lat-pull down exercises. Normalized EMG of BB and ES and kinematics of shoulder and C7 for chin-ups were greater than lat-pull down exercises during the concentric phase (p < 0.05). For the eccentric phase, RA during lat-pull down exercises was greater than chin-ups and the kinematics of C7 during chin-ups was greater than lat-pull down exercises (p < 0.05). For chin-ups, BB, LD, and ES were greater than PM during the concentric phase, whereas BB and LD were greater than TB, and LD was greater than RA during the eccentric phase (p < 0.05). For lat-pull down exercise, BB and LD were greater than PM, TB, and ES during the concentric phase, whereas LD was greater than PM, TB, and BB during the eccentric phase (p < 0.05). Subsequently, chin-ups appears to be a more functional exercise.

  5. MicroRNA-181b promotes ovarian cancer cell growth and invasion by targeting LATS2

    SciTech Connect

    Xia, Ying; Gao, Yan

    2014-05-09

    Highlights: • miR-181b is upregulated in human ovarian cancer tissues. • miR-181b promotes ovarian cancer cell proliferation and invasion. • LATS2 is a direct target of miR-181b. • LATS2 is involved in miR-181b-induced ovarian cancer cell growth and invasion. - Abstract: MicroRNAs (miRNAs) are strongly implicated in tumorigenesis and metastasis. In this study, we showed significant upregulation of miR-181b in ovarian cancer tissues, compared with the normal ovarian counterparts. Forced expression of miR-181b led to remarkably enhanced proliferation and invasion of ovarian cancer cells while its knockdown induced significant suppression of these cellular events. The tumor suppressor gene, LATS2 (large tumor suppressor 2), was further identified as a novel direct target of miR-181b. Specifically, miR-181b bound directly to the 3′-untranslated region (UTR) of LATS2 and suppressed its expression. Restoration of LATS2 expression partially reversed the oncogenic effects of miR-181b. Our results indicate that miR-181b promotes proliferation and invasion by targeting LATS2 in ovarian cancer cells. These findings support the utility of miR-181b as a potential diagnostic and therapeutic target for ovarian cancer.

  6. Performance of CHROMagar Staph aureus and CHROMagar MRSA for detection of Staphylococcus aureus in seawater and beach sand--comparison of culture, agglutination, and molecular analyses.

    PubMed

    Goodwin, K D; Pobuda, M

    2009-11-01

    Beach seawater and sand were analyzed for Staphylococcus aureus and methicillin resistant S. aureus (MRSA) for samples collected from Avalon, and Doheny Beach, CA. Membrane filtration followed by incubation on CHROMagar Staph aureus (SCA) and CHROMagar MRSA (C-MRSA) was used to enumerate S. aureus and MRSA, respectively. Media performance was evaluated by comparing identification via colony morphology and latex agglutination tests to PCR (clfA, 16S, and mecA genes). Due to background color and crowding, picking colonies from membrane filters and streaking for isolation were sometimes necessary. The specificity of SCA and C-MRSA was improved if colony isolates were identified by the presence of a matte halo in addition to mauve color; however routine agglutination testing of isolates did not appear warranted. Using the appearance of a colony on the membrane filter in conjunction with isolate appearance, the positive % agreement, the negative % agreement, and the % positive predictive accuracy for SCA was 84%, 95%, and 99% respectively, and for C-MRSA it was 85%, 98%, and 92%, respectively. Sensitivity and specificity of SCA and C-MRSA with membrane-filtered beach samples were optimized through identification experience, control of filter volume and incubation time, and isolation of colonies needing further identification. With optimization, SCA and C-MRSA could be used for enumeration of S. aureus and MRSA from samples of beach water and sand. For the sites studied here, the frequency of detection of S. aureus ranged from 60 to 76% and 53 to 79% for samples of beach seawater and sand, respectively. The frequency of detection of MRSA ranged from 2 to 9% and 0 to 12% for samples of seawater and sand, respectively.

  7. Quick serological detection of a cancer biomarker with an agglutinated supramolecular glycoprobe.

    PubMed

    He, Xiao-Peng; Hu, Xi-Le; Jin, Hong-Ying; Gan, Jiemin; Zhu, Huili; Li, Jia; Long, Yi-Tao; Tian, He

    2015-09-01

    While serology represents the forefront technique for cancer diagnosis, current clinical methods for the detection of serum biomarkers have flaws in terms of the need of complicated manipulations, long analytical time, and high cost. Here, we develop a supramolecular glycoprobe for the quick serological detection of a cancer biomarker. The probe formed by agglutination between self-assembled glyco-gold nanoparticles and a lectin shows subtle optical variations upon the competitive recognition of a glycoprotein biomarker secreted by cancer cells, tumor-bearing mice, as well as clinical cancer patients, with no response to a series of controls including the serum of hepatitis patients. This research provides an insight into the development of effective tools for serological diagnosis of cancer.

  8. THREE MILLISECOND PULSARS IN FERMI LAT UNASSOCIATED BRIGHT SOURCES

    SciTech Connect

    Ransom, S. M.; Ray, P. S.; Wolff, M. T.; Grove, J. E.; Camilo, F.; Roberts, M. S. E.; Celik, Oe.; DeCesar, M. E.; Ferrara, E. C.; Gehrels, N.; Cheung, C. C.; Abdo, A. A.; Kerr, M.; Pennucci, T.; Cognard, I.; Freire, P. C. C.; Desvignes, G.; Donato, D. E-mail: Paul.Ray@nrl.navy.mil

    2011-01-20

    We searched for radio pulsars in 25 of the non-variable, unassociated sources in the Fermi LAT Bright Source List with the Green Bank Telescope at 820 MHz. We report the discovery of three radio and {gamma}-ray millisecond pulsars (MSPs) from a high Galactic latitude subset of these sources. All of the pulsars are in binary systems, which would have made them virtually impossible to detect in blind {gamma}-ray pulsation searches. They seem to be relatively normal, nearby ({<=}2 kpc) MSPs. These observations, in combination with the Fermi detection of {gamma}-rays from other known radio MSPs, imply that most, if not all, radio MSPs are efficient {gamma}-ray producers. The {gamma}-ray spectra of the pulsars are power law in nature with exponential cutoffs at a few GeV, as has been found with most other pulsars. The MSPs have all been detected as X-ray point sources. Their soft X-ray luminosities of {approx}10{sup 30}-10{sup 31} erg s{sup -1} are typical of the rare radio MSPs seen in X-rays.

  9. The First Fermi-LAT Supernova Remnant Catalog

    NASA Astrophysics Data System (ADS)

    Brandt, T. J.; Fermi-LAT Collaboration

    2015-04-01

    The Fermi Gamma-ray Space Telescope's Large Area Telescope (Fermi-LAT) has shed new light on many types of Galactic objects, including many individual Supernova Remnants (SNRs). The spectral detection of hadronic gamma-ray emission from two SNRs, suggesting acceleration of cosmic ray (CR) protons, is an example of individual studies providing clues to characteristics that may be common to all SNRs. To uniformly determine SNR properties, we have developed the first systematic survey of SNRs from 1 to 100 GeV. From the 279 known radio SNRs, we found more than 100 GeV candidates, 31 of which are likely and 14 of which are marginally counterparts. These candidates span a wide range of multiwavelength properties, providing a critical context for complementary, in depth individual studies. Modeling this multiwavelength data demonstrates the need for improvements to previously sufficient, simple models describing the GeV and radio emission from hadronic and leptonic particle populations in these objects. Together with the > 240 upper limits on GeV emission at the radio position and extension, our results also enable us to indirectly constrain SNRs' aggregate ability to accelerate CRs, and with direct measurements, will additionally enable a better understanding of CR origins.

  10. Energetic Fermi/LAT GRB 100414A: Energetic and Correlations

    NASA Astrophysics Data System (ADS)

    Urata, Yuji; Huang, Kuiyun; Yamaoka, Kazutaka; Tsai, Patrick P.; Tashiro, Makoto S.

    2012-03-01

    This study presents multi-wavelength observational results for energetic GRB 100414A with GeV photons. The prompt spectral fitting using Suzaku/WAM data yielded spectral peak energies of E src peak of 1458.7+132.6 - 106.6 keV and E iso of 34.5+2.0 - 1.8 × 1052 erg with z = 1.368. The optical afterglow light curves between 3 and 7 days were effectively fitted according to a simple power law with a temporal index of α = -2.6 ± 0.1. The joint light curve with earlier Swift/UVOT observations yields a temporal break at 2.3 ± 0.2 days. This was the first Fermi/LAT detected event that demonstrated the clear temporal break in the optical afterglow. The jet opening angle derived from this temporal break was 5fdg8, consistent with those of other well-observed long gamma-ray bursts (GRBs). The multi-wavelength analyses in this study showed that GRB 100414A follows E src peak-E iso and E src peak-E γ correlations. The late afterglow revealed a flatter evolution with significant excesses at 27.2 days. The most straightforward explanation for the excess is that GRB 100414A was accompanied by a contemporaneous supernova. The model light curve based on other GRB-SN events is marginally consistent with that of the observed light curve.

  11. The first Fermi LAT supernova remnant catalog

    SciTech Connect

    Acero, F.

    2016-05-16

    To uniformly determine the properties of supernova remnants (SNRs) at high energies, we have developed the first systematic survey at energies from 1 to 100 GeV using data from the Fermi Large Area Telescope. Based on the spatial overlap of sources detected at GeV energies with SNRs known from radio surveys, we classify 30 sources as likely GeV SNRs. We also report 14 marginal associations and 245 flux upper limits. A mock catalog in which the positions of known remnants are scrambled in Galactic longitude, allows us to determine an upper limit of 22% on the number of GeV candidates falsely identified as SNRs. We have also developed a method to estimate spectral and spatial systematic errors arising from the diffuse interstellar emission model, a key component of all Galactic Fermi LAT analyses. By studying remnants uniformly in aggregate, we measure the GeV properties common to these objects and provide a crucial context for the detailed modeling of individual SNRs. Combining our GeV results with multiwavelength (MW) data, including radio, X-ray, and TeV, demonstrates the need for improvements to previously sufficient, simple models describing the GeV and radio emission from these objects. As a result, we model the GeV and MW emission from SNRs in aggregate to constrain their maximal contribution to observed Galactic cosmic rays.

  12. Three Millisecond Pulsars in Fermi LAT Unassociated Bright Sources

    NASA Technical Reports Server (NTRS)

    Ransom, S. M.; Ray, P. S.; Camilo, F.; Roberts, M. S. E.; Celik, O.; Wolff, M. T.; Cheung, C. C.; Kerr, M.; Pennucci, T.; DeCesar, M. E.; Cognard, I.; Lyne, A. G.; Stappers, B. W.; Freire, P. C. C.; Grove, J. E.; Abdo, A. A.; Desvignes, G.; Donato, D.; Ferrara, E. C.; Gehrels, N.; Guillemot, L.; Gwon, C.; Johnston, S.; Harding, A. K.; Thompson, D. J.

    2010-01-01

    We searched for radio pulsars in 25 of the non-variable, unassociated sources in the Fermi LAT Bright Source List with the Green Bank Telescope at 820 MHz. We report the discovery of three radio and gamma-ray millisecond pulsar (MSPs) from a high Galactic latitude subset of these sources. All of the pulsars are in binary systems, which would have made them virtually impossible to detect in blind gamma-ray pulsation searches. They seem to be relatively normal, nearby (<= 2 kpc) MSPs. These observations, in combination with the Fermi detection of gamma-rays from other known radio MSPs, imply that most, if not all, radio MSPs are efficient gamma-ray producers. The gamma-ray spectra of the pulsars are power law in nature with exponential cutoffs at a few Ge V, as has been found with most other pulsars. The MSPs have all been detected as X-ray point sources. Their soft X-ray luminosities of approx 10(exp 30) - 10(exp 31) erg/s are typical of the rare radio MSPs seen in X-rays.

  13. Fermi-LAT Observation of Supernova Remnant S147

    SciTech Connect

    Katsuta, J.; Uchiyama, Y.; Tanaka, T.; Tajima, H.; Bechtol, K.; Funk, S.; Lande, J.; Ballet, J.; Hanabata, Y.; Lemoine-Goumard, M.; Takahashi, T.; /JAXA, Sagamihara

    2012-08-17

    We present an analysis of gamma-ray data obtained with the Large Area Telescope (LAT) onboard the Fermi Gamma-ray Space Telescope in the region around SNR S147 (G180.0-1.7). A spatially extended gamma-ray source detected in an energy range of 0.2-10 GeV is found to coincide with SNR S147. We confirm its spatial extension at >5{sigma} confidence level. The gamma-ray flux is (3.8 {+-} 0.6) x 10{sup -8} photons cm{sup -2} s{sup -1}, corresponding to a luminosity of 1.3 x 10{sup 34} (d/1.3 kpc){sup 2} erg s{sup -1} in this energy range. The gamma-ray emission exhibits a possible spatial correlation with prominent H{alpha} filaments of S147. There is no indication that the gamma-ray emission comes from the associated pulsar PSR J0538+2817. The gamma-ray spectrum integrated over the remnant is likely dominated by the decay of neutral {pi} mesons produced through the proton-proton collisions in the filaments. Reacceleration of pre-existing CRs and subsequent adiabatic compression in the filaments is sufficient to provide the required energy density of high-energy protons.

  14. The Fermi-LAT view of the colliding wind binaries

    NASA Astrophysics Data System (ADS)

    Pshirkov, M. S.

    2016-03-01

    Colliding wind binaries (CWBs) have been considered as a possible high-energy γ-ray sources for some time, however no system other than η Car has been detected. In the Letter, a sample of seven CWBs (WR 11, WR 70, WR 137, WR 140, WR 146, WR 147) which, by means of theoretic modelling, were deemed most promising candidates, was analysed using almost 7 yr of the Fermi-Large Area Telescope (LAT) data. WR 11 (γ2 Vel) was detected at 6.1σ confidence level with a photon flux in 0.1-100 GeV range (1.8 ± 0.6) × 10-9 ph cm-2 s-1 and an energy flux (2.7 ± 0.5) × 10-12 erg cm-2 s-1. At the adopted distance d = 340 pc this corresponds to a luminosity L = (3.7 ± 0.7) × 1031 erg s-1. This luminosity amounts to ˜6 × 10-6 fraction of the total wind kinetic power and ˜1.6 × 10-4 fraction of the power injected into the wind-wind interaction region of this system. Upper limits were set on the high energy flux from the WR 70 and WR 140 systems.

  15. Agglutination of Histoplasma capsulatum by IgG Monoclonal Antibodies against Hsp60 Impacts Macrophage Effector Functions▿

    PubMed Central

    Guimarães, Allan Jefferson; Frases, Susana; Pontes, Bruno; de Cerqueira, Mariana Duarte; Rodrigues, Marcio L.; Viana, Nathan Bessa; Nimrichter, Leonardo; Nosanchuk, Joshua Daniel

    2011-01-01

    Histoplasma capsulatum can efficiently survive within macrophages, facilitating H. capsulatum translocation from the lung into the lymphatics and bloodstream. We have recently generated monoclonal antibodies (MAbs) to an H. capsulatum surface-expressed heat shock protein of 60 kDa (Hsp60) that modify disease in a murine histoplasmosis model. Interestingly, the MAbs induced different degrees of yeast cell agglutination in vitro. In the present study, we characterized the agglutination effects of the antibodies to Hsp60 on H. capsulatum yeast cells by light microscopy, flow cytometry, dynamic light scattering, measuring zeta potential, and using optical tweezers. We found that immunoglobulin Gs (IgGs) to Hsp60 cause H. capsulatum aggregation dependent on the (i) concentration of MAbs, (ii) MAb binding constant, and (iii) IgG subclass. Furthermore, infection of macrophages using agglutinates of various sizes after incubation with different Hsp60-binding MAbs induced association to macrophages through distinct cellular receptors and differentially affected macrophage antifungal functions. Hence, the capacity of IgG MAbs to agglutinate H. capsulatum significantly impacted pathogenic mechanisms of H. capsulatum during macrophage infection, and the effect was dependent on the antibody subclass and antigen epitope. PMID:21134968

  16. Deep view of the Large Magellanic Cloud with six years of Fermi-LAT observations

    NASA Astrophysics Data System (ADS)

    Ackermann, M.; Albert, A.; Atwood, W. B.; Baldini, L.; Ballet, J.; Barbiellini, G.; Bastieri, D.; Bellazzini, R.; Bissaldi, E.; Bloom, E. D.; Bonino, R.; Brandt, T. J.; Bregeon, J.; Bruel, P.; Buehler, R.; Caliandro, G. A.; Cameron, R. A.; Caragiulo, M.; Caraveo, P. A.; Cavazzuti, E.; Cecchi, C.; Charles, E.; Chekhtman, A.; Chiang, J.; Chiaro, G.; Ciprini, S.; Cohen-Tanugi, J.; Cutini, S.; D'Ammando, F.; de Angelis, A.; de Palma, F.; Desiante, R.; Digel, S. W.; Drell, P. S.; Favuzzi, C.; Ferrara, E. C.; Focke, W. B.; Franckowiak, A.; Fusco, P.; Gargano, F.; Gasparrini, D.; Giglietto, N.; Giordano, F.; Godfrey, G.; Grenier, I. A.; Grondin, M.-H.; Guillemot, L.; Guiriec, S.; Harding, A. K.; Hill, A. B.; Horan, D.; Jóhannesson, G.; Knödlseder, J.; Kuss, M.; Larsson, S.; Latronico, L.; Li, J.; Li, L.; Longo, F.; Loparco, F.; Lubrano, P.; Maldera, S.; Martin, P.; Mayer, M.; Mazziotta, M. N.; Michelson, P. F.; Mizuno, T.; Monzani, M. E.; Morselli, A.; Murgia, S.; Nuss, E.; Ohsugi, T.; Orienti, M.; Orlando, E.; Ormes, J. F.; Paneque, D.; Pesce-Rollins, M.; Piron, F.; Pivato, G.; Porter, T. A.; Rainò, S.; Rando, R.; Razzano, M.; Reimer, A.; Reimer, O.; Romani, R. W.; Sánchez-Conde, M.; Schulz, A.; Sgrò, C.; Siskind, E. J.; Smith, D. A.; Spada, F.; Spandre, G.; Spinelli, P.; Suson, D. J.; Takahashi, H.; Thayer, J. B.; Tibaldo, L.; Torres, D. F.; Tosti, G.; Troja, E.; Vianello, G.; Wood, M.; Zimmer, S.

    2016-02-01

    Context. The nearby Large Magellanic Cloud (LMC) provides a rare opportunity of a spatially resolved view of an external star-forming galaxy in γ-rays. The LMC was detected at 0.1-100 GeV as an extended source with CGRO/EGRET and using early observations with the Fermi-LAT. The emission was found to correlate with massive star-forming regions and to be particularly bright towards 30 Doradus. Aims: Studies of the origin and transport of cosmic rays (CRs) in the Milky Way are frequently hampered by line-of-sight confusion and poor distance determination. The LMC offers a complementary way to address these questions by revealing whether and how the γ-ray emission is connected to specific objects, populations of objects, and structures in the galaxy. Methods: We revisited the γ-ray emission from the LMC using about 73 months of Fermi-LAT P7REP data in the 0.2-100 GeV range. We developed a complete spatial and spectral model of the LMC emission, for which we tested several approaches: a simple geometrical description, template-fitting, and a physically driven model for CR-induced interstellar emission. Results: In addition to identifying PSR J0540-6919 through its pulsations, we find two hard sources positionally coincident with plerion N 157B and supernova remnant N 132D, which were also detected at TeV energies with H.E.S.S. We detect an additional soft source that is currently unidentified. Extended emission dominates the total flux from the LMC. It consists of an extended component of about the size of the galaxy and additional emission from three to four regions with degree-scale sizes. If it is interpreted as CRs interacting with interstellar gas, the large-scale emission implies a large-scale population of ~1-100 GeV CRs with a density of ~30% of the local Galactic value. On top of that, the three to four small-scale emission regions would correspond to enhancements of the CR density by factors 2 to 6 or higher, possibly more energetic and younger populations

  17. Cloning of two genes (LAT1,2) encoding specific L: -arabinose transporters of the L: -arabinose fermenting yeast Ambrosiozyma monospora.

    PubMed

    Verho, Ritva; Penttilä, Merja; Richard, Peter

    2011-07-01

    We identified and characterized two genes, LAT1 and LAT2, which encode specific L: -arabinose transporters. The genes were identified in the L: -arabinose fermenting yeast Ambrosiozyma monospora. The yeast Saccharomyces cerevisiae had only very low L: -arabinose transport activity; however, when LAT1 or LAT2 was expressed, L: -arabinose transport was facilitated. When the LAT1 or LAT2 were expressed in an S. cerevisiae mutant where the main hexose transporters were deleted, the L: -arabinose transporters could not restore growth on D: -glucose, D: -fructose, D: -mannose or D: -galactose. This indicates that these sugars are not transported and suggests that the transporters are specific for L: -arabinose.

  18. ENERGETIC FERMI/LAT GRB 100414A: ENERGETIC AND CORRELATIONS

    SciTech Connect

    Urata, Yuji; Tsai, Patrick P.; Huang, Kuiyun; Yamaoka, Kazutaka; Tashiro, Makoto S.

    2012-03-20

    This study presents multi-wavelength observational results for energetic GRB 100414A with GeV photons. The prompt spectral fitting using Suzaku/WAM data yielded spectral peak energies of E{sup src}{sub peak} of 1458.7{sup +132.6}{sub -106.6} keV and E{sub iso} of 34.5{sup +2.0}{sub -1.8} Multiplication-Sign 10{sup 52} erg with z = 1.368. The optical afterglow light curves between 3 and 7 days were effectively fitted according to a simple power law with a temporal index of {alpha} = -2.6 {+-} 0.1. The joint light curve with earlier Swift/UVOT observations yields a temporal break at 2.3 {+-} 0.2 days. This was the first Fermi/LAT detected event that demonstrated the clear temporal break in the optical afterglow. The jet opening angle derived from this temporal break was 5.{sup 0}8, consistent with those of other well-observed long gamma-ray bursts (GRBs). The multi-wavelength analyses in this study showed that GRB 100414A follows E{sup src}{sub peak}-E{sub iso} and E{sup src}{sub peak}-E{sub {gamma}} correlations. The late afterglow revealed a flatter evolution with significant excesses at 27.2 days. The most straightforward explanation for the excess is that GRB 100414A was accompanied by a contemporaneous supernova. The model light curve based on other GRB-SN events is marginally consistent with that of the observed light curve.

  19. Cerebral Cortex Hyperthyroidism of Newborn Mct8-Deficient Mice Transiently Suppressed by Lat2 Inactivation

    PubMed Central

    Núñez, Bárbara; Martínez de Mena, Raquel; Obregon, Maria Jesus; Font-Llitjós, Mariona; Nunes, Virginia; Palacín, Manuel; Dumitrescu, Alexandra M.; Morte, Beatriz; Bernal, Juan

    2014-01-01

    Thyroid hormone entry into cells is facilitated by transmembrane transporters. Mutations of the specific thyroid hormone transporter, MCT8 (Monocarboxylate Transporter 8, SLC16A2) cause an X-linked syndrome of profound neurological impairment and altered thyroid function known as the Allan-Herndon-Dudley syndrome. MCT8 deficiency presumably results in failure of thyroid hormone to reach the neural target cells in adequate amounts to sustain normal brain development. However during the perinatal period the absence of Mct8 in mice induces a state of cerebral cortex hyperthyroidism, indicating increased brain access and/or retention of thyroid hormone. The contribution of other transporters to thyroid hormone metabolism and action, especially in the context of MCT8 deficiency is not clear. We have analyzed the role of the heterodimeric aminoacid transporter Lat2 (Slc7a8), in the presence or absence of Mct8, on thyroid hormone concentrations and on expression of thyroid hormone-dependent cerebral cortex genes. To this end we generated Lat2-/-, and Mct8-/yLat2-/- mice, to compare with wild type and Mct8-/y mice during postnatal development. As described previously the single Mct8 KO neonates had a transient increase of 3,5,3′-triiodothyronine concentration and expression of thyroid hormone target genes in the cerebral cortex. Strikingly the absence of Lat2 in the double Mct8Lat2 KO prevented the effect of Mct8 inactivation in newborns. The Lat2 effect was not observed from postnatal day 5 onwards. On postnatal day 21 the Mct8 KO displayed the typical pattern of thyroid hormone concentrations in plasma, decreased cortex 3,5,3′-triiodothyronine concentration and Hr expression, and concomitant Lat2 inactivation produced little to no modifications. As Lat2 is expressed in neurons and in the choroid plexus, the results support a role for Lat2 in the supply of thyroid hormone to the cerebral cortex during early postnatal development. PMID:24819605

  20. Activation of T lymphocytes and the role of the adapter LAT.

    PubMed

    Aguado, Enrique; Martínez-Florensa, Mario; Aparicio, Pedro

    2006-12-01

    The adapter molecule LAT (Linker for the Activation of T cells) is a membrane protein that becomes phosphorylated on conserved tyrosine residues upon TCR/CD3 complex engagement in T lymphocytes. Tyrosine phosphorylation of this adapter recruits to the membrane many signaling proteins through the interaction with the phosphotyrosine binding domains of these proteins, allowing the activation of several intracellular signaling pathways. Initial studies performed in T cell lines suggested that the adapter LAT acts primarily as a platform for the distribution of activation signals coming from the TCR/CD3 complex, and the phenotype of LAT deficient mice, in which T cell development is arrested at an early stage, supported this "activatory" function. However, the analysis of several knock-in mice strains in which some tyrosine residues have been mutated, has revealed the development of lymphoproliferative disorders caused by polyclonal T lymphocytes producing high titers of T helper-type 2 (T(H)2) cytokines. Very recently, it has been demonstrated that raft localization of LAT is altered in anergic T lymphocytes. Therefore, LAT show unexpected regulatory functions in T cell development and homeostasis.

  1. Modulation of LAT1 (SLC7A5) transporter activity and stability by membrane cholesterol

    PubMed Central

    Dickens, David; Chiduza, George N.; Wright, Gareth S. A.; Pirmohamed, Munir; Antonyuk, Svetlana V.; Hasnain, S. Samar

    2017-01-01

    LAT1 (SLC7A5) is a transporter for both the uptake of large neutral amino acids and a number of pharmaceutical drugs. It is expressed in numerous cell types including T-cells, cancer cells and brain endothelial cells. However, mechanistic knowledge of how it functions and its interactions with lipids are unknown or limited due to inability of obtaining stable purified protein in sufficient quantities. Our data show that depleting cellular cholesterol reduced the Vmax but not the Km of the LAT1 mediated uptake of a model substrate into cells (L-DOPA). A soluble cholesterol analogue was required for the stable purification of the LAT1 with its chaperon CD98 (4F2hc,SLC3A2) and that this stabilised complex retained the ability to interact with a substrate. We propose cholesterol interacts with the conserved regions in the LAT1 transporter that have been shown to bind to cholesterol/CHS in Drosophila melanogaster dopamine transporter. In conclusion, LAT1 is modulated by cholesterol impacting on its stability and transporter activity. This novel finding has implications for other SLC7 family members and additional eukaryotic transporters that contain the LeuT fold. PMID:28272458

  2. Constraints on the pMSSM from LAT Observations of Dwarf Spheroidal Galaxies

    SciTech Connect

    Cotta, R.C.; Drlica-Wagner, A.; Murgia, S.; Bloom, E.D.; Hewett, J.L.; Rizzo, T.G.; /SLAC

    2012-03-15

    We examine the ability for the Large Area Telescope (LAT) to constrain Minimal Supersymmetric Standard Model (MSSM) dark matter through a combined analysis of Milky Way dwarf spheroidal galaxies. We examine the Lightest Supersymmetric Particles (LSPs) for a set of {approx}71k experimentally valid supersymmetric models derived from the phenomenological-MSSM (pMSSM). We find that none of these models can be excluded at 95% confidence by the current analysis; nevertheless, many lie within the predicted reach of future LAT analyses. With two years of data, we find that the LAT is currently most sensitive to light LSPs (mLSP < 50 GeV) annihilating into {tau}-pairs and heavier LSPs annihilating into b{bar b}. Additionally, we find that future LAT analyses will be able to probe some LSPs that form a sub-dominant component of dark matter. We directly compare the LAT results to direct detection experiments and show the complementarity of these search methods.

  3. Constraints on the pMSSM from LAT observations of dwarf spheroidal galaxies

    SciTech Connect

    Cotta, R.C.; Hewett, J.L.; Rizzo, T.G.; Drlica-Wagner, A.; Murgia, S.; Bloom, E.D. E-mail: kadrlica@stanford.edu E-mail: elliott@slac.stanford.edu E-mail: rizzo@slac.stanford.edu

    2012-04-01

    We examine the ability for the Large Area Telescope (LAT) to constrain Minimal Supersymmetric Standard Model (MSSM) dark matter through a combined analysis of Milky Way dwarf spheroidal galaxies. We examine the Lightest Supersymmetric Particles (LSPs) for a set of ∼ 71k experimentally valid supersymmetric models derived from the phenomenological-MSSM (pMSSM). We find that none of these models can be excluded at 95% confidence by the current analysis; nevertheless, many lie within the predicted reach of future LAT analyses. With two years of data, we find that the LAT is currently most sensitive to light LSPs (m{sub LSP} < 50GeV) annihilating into τ-pairs and heavier LSPs annihilating into b b-bar . Additionally, we find that future LAT analyses will be able to probe some LSPs that form a sub-dominant component of dark matter. We directly compare the LAT results to direct detection experiments and show the complementarity of these search methods.

  4. Searches for Angular Extension in High Latitude Fermi-LAT Sources

    NASA Astrophysics Data System (ADS)

    Caputo, Regina; di Mauro, Mattia; Meyer, Manuel; Wells, Brendan; Wood, Matthew; Fermi-LAT Collaboration

    2017-01-01

    We present a comprehensive search for angular extension in high-latitude gamma-ray sources detected by the Fermi Large Area Telescope (LAT) using the 4-year LAT Point Source Catalog (3FGL). The majority of high-latitude LAT sources are extragalactic blazars that appear point-like within the LAT angular resolution. However, there are physics scenarios that predict populations of spatially extended sources. In one scenario, electron-positron pair cascades from gamma rays produced in blazars are deflected in the Intergalactic Magnetic Field (IGMF) producing extended emission, or ``pair halos''. The detection of a pair halo component around a LAT-detected blazar would provide a measurement of the strength and coherence length scale of the IGMF. In another scenario, the annihilation or decay of Weakly Interacting Massive Particles, a candidate for dark matter (DM), in Milky Way subhalos would appear as a population of unassociated gamma-ray sources with an angular extension. The detection of spatial extension in nearby sub halos could provide compelling evidence for a DM interpretation and would serve as an independent cross-check against other DM searches. We report on the angular extension catalog based on 7.5 years of Pass 8 data and discuss the implications of these results.

  5. The X-Ray Counterpart to LAT PSR J2021+4026 and Its Interesting Spectrum

    NASA Technical Reports Server (NTRS)

    Weisskopf, Martin C.; Becker, W.; Carraminana, A.; De Luca, A.; Dormandy, M.; Harding, A.; Kanbach, G.; O'Dell, S. L.; Parkinson, P. Saz; Ray, P.; Razzano, M.; Romani, R.; Tennant, A. F.; Swarz, D. A.; Thompson, D.; Ziegler, M.

    2011-01-01

    We report on the likely identification of the X-ray counterpart to LAT PSR J2021+4026, using the Chandra X-Ray Observatory ACIS-S3 and timing analysis of Large Area telescope (LAT) data from the Fermi satellite. The X-ray source that lies closest (10 arcsec) to the position determined from the Fermi-LAT timing solution has no cataloged infrared-to-visible counterpart and we have set an upper limit to its optical I and R band emission. The source exhibits a X-ray spectrum which is different when compared to Geminga and CTA 1, and this may have implications for the evolutionary track of radio-quiet gamma-ray pulsars.

  6. Sharper Fermi LAT images: instrument response functions for an improved event selection

    SciTech Connect

    Portillo, Stephen K. N.; Finkbeiner, Douglas P.

    2014-11-20

    The Large Area Telescope (LAT) on the Fermi Gamma-ray Space Telescope has a point-spread function (PSF) with large tails, consisting of events affected by tracker inefficiencies, inactive volumes, and hard scattering; these tails can make source confusion a limiting factor. The parameter CTBCORE, available in the publicly available Extended Fermi LAT data (available at http://fermi.gsfc.nasa.gov/ssc/data/access/), estimates the quality of each event's direction reconstruction; by implementing a cut in this parameter, the tails of the PSF can be suppressed at the cost of losing effective area. We implement cuts on CTBCORE and present updated instrument response functions derived from the Fermi LAT data itself, along with all-sky maps generated with these cuts. Having shown the effectiveness of these cuts, especially at low energies, we encourage their use in analyses where angular resolution is more important than Poisson noise.

  7. Sharper Fermi LAT Images: Instrument Response Functions for an Improved Event Selection

    NASA Astrophysics Data System (ADS)

    Portillo, Stephen K. N.; Finkbeiner, Douglas P.

    2014-11-01

    The Large Area Telescope (LAT) on the Fermi Gamma-ray Space Telescope has a point-spread function (PSF) with large tails, consisting of events affected by tracker inefficiencies, inactive volumes, and hard scattering; these tails can make source confusion a limiting factor. The parameter CTBCORE, available in the publicly available Extended Fermi LAT data (available at http://fermi.gsfc.nasa.gov/ssc/data/access/), estimates the quality of each event's direction reconstruction; by implementing a cut in this parameter, the tails of the PSF can be suppressed at the cost of losing effective area. We implement cuts on CTBCORE and present updated instrument response functions derived from the Fermi LAT data itself, along with all-sky maps generated with these cuts. Having shown the effectiveness of these cuts, especially at low energies, we encourage their use in analyses where angular resolution is more important than Poisson noise.

  8. Cytotoxic, cell agglutinating, and syncytium forming effect of purified lectins from Ricinus communis on cultured cells.

    PubMed

    Koga, M; Ohtsu, M; Funatsu, G

    1979-10-01

    The toxicity of lectins from castor bean (Ricinus communis L.), ricin-D, ricin-E, and castor bean hemagglutinin, was investigated on five cultured cell lines. The differential effect of their constituent polypeptide chains was also investigated using these cell lines. Ricin-D, ricin-E, and castor bean hemagglutinin (CBH) possessed cytoagglutinating activity and cytotoxic activity to all five cell lines. These lectins showed the strongest toxicity to L5178Y cells, which are leukemic cells. The toxic activity of ricin-D was stronger than that of CBH in all cell lines. The constituent polypebtide chains of ricin-D and CBH were separated by DEAE-cellulose chromatography and designated as isoleucine chain and alanine chain denoted by their N-terminal amino acids. Only alanine chain of ricin-D was toxic to cells grown in vitro, whereas isoleucine chain of ricin-D and alanine chain of CBH were not toxic to the cells. Moreover, it was found that both lectins caused syncytium formation in NIH3T3 cells infected with Moloney leukemia virus and this cell fusion activity was shown to be exclusively associated with the alanine chain. Cytotoxic, cell agglutinating, and syncytium forming effect of the lectins is due to binding of the alanine chain of ricin-D to galactose-like residues of the membrane constituents of these cells.

  9. Type 2B von Willebrand disease associated with the release of platelet agglutinates from megakaryocytes in the bone marrow.

    PubMed

    Slayton, William B; Patel, Milin; Sola-Visner, Martha; Harris, Neil; Rivers, Angela; Montgomery, Robert R; Friedman, Kenneth D

    2008-09-01

    We report a child with thrombocytopenia since birth, circulating platelet agglutinates, and a tendency to bleed. A bone marrow aspirate revealed large platelet clumps within the bone marrow and megakaryocyte nuclei surrounded by halos of clumped platelets. Laboratory evaluation revealed type 2B von Willebrand disease. Gene sequencing revealed a G to C mutation at base 3923 of the VWF gene. This mutation was previously described in a family with circulating platelet clumps and abnormal megakaryopoiesis with release of clumped platelets in culture. This same mutation was previously described in a family with circulating platelet aggregates and abnormalities of platelet release from megakaryocytes in vitro. Presence of megakaryocytes with halos of clumped platelets in our patient suggests that platelet agglutinate occurs in the bone marrow in some type 2B von Willebrand disease patients.

  10. An acousto-optical method for registration of erythrocytes' agglutination reaction—sera color influence on the resolving power

    NASA Astrophysics Data System (ADS)

    Doubrovski, V. A.; Medvedeva, M. F.; Torbin, S. O.

    2016-01-01

    The absorption spectra of agglutinating sera were used to determine blood groups. It was shown experimentally that the sera color significantly affects the resolving power of the acousto-optical method of blood typing. In order to increase the resolving power of the method and produce an invariance of the method for sera color, we suggested introducing a probing light beam individually for different sera. The proposed technique not only improves the resolving power of the method, but also reduces the risk of false interpretation of the experimental results and, hence, error in determining the blood group of the sample. The latter is especially important for the typing of blood samples with weak agglutination of erythrocytes. This study can be used in the development of an instrument for instrumental human blood group typing based on the acousto-optical method.

  11. Fermi-LAT Gamma-ray Observations of Nova Lupus 2016 (ASASSN-16kt)

    NASA Astrophysics Data System (ADS)

    Cheung, C. C.; Jean, P.; Shore, S. N.; Fermi Large Area Telescope Collaboration

    2016-10-01

    The Fermi Gamma-ray Space Telescope performed a ~6-day Target of Opportunity (ToO) observation of Nova Lupus 2016 (ATel #9538, #9539, CBET #4322) that commenced on September 28. Considering earlier all-sky survey Large Area Telescope (LAT) observations as well, preliminary analysis indicates gamma-ray emission at ~2 sigma was detected around 1 to 2 days after the optical peak on September 25th (pre-validated AAVSO visual lightcurve; ATel #9550, CBET #4322) when the optical spectra show opaque ejecta, similar to previous gamma-ray detected novae (Fermi-LAT collaboration, 2014 Science 345, 554; Cheung et al. 2016 ApJ 826, 142).

  12. Acoustical facies analysis at the Ba Lat delta front (Red River Delta, North Vietnam)

    NASA Astrophysics Data System (ADS)

    van den Bergh, G. D.; van Weering, Tj. C. E.; Boels, J. F.; Duc, D. M.; Nhuan, M. T.

    2007-02-01

    A shallow penetrating, high-resolution acoustic study was performed in the Ba Lat delta, the major distributary of the Red River System in Northern Vietnam. An acoustic facies map was constructed and the various facies types were validated through analysis of bottom sediments, by a study of gravity cores collected at 22 stations. Analysis of the acoustic profiles and gravity cores revealed the presence of an asymmetrical, S to SW prograding prodelta lobe, in accordance with the prevailing longshore currents to the S. The southern part of this prodelta is detached from the protruding Ba Lat delta front. The prodelta is dominated by muddy sediments with minor thin (<5 cm) sandy and silty layers. The coarser-grained layers decrease in abundance away from the Ba Lat river mouth. Offshore, the modern delta deposits are characterized by an off-lapping contact over a semi-prolonged bottom reflector lacking any sub-bottom reflectors. This semi-prolonged bottom reflector is correlated with sandy deposits of presumably Early Holocene age. Bottom and coastal erosion is restricted to two areas N and SW of the Ba Lat. Erosion in the North is inferred to be due to reduced sediment supply as a result of shifting in 1971 of the main outlet to its present, more southern location. The erosional area along the Hai Hau coast SW of the Ba Lat also has experienced a reduction in sediment supply in the course of the 20th century, when the local Song Vop distributary channel became less active and was completely dammed in the 1970s. Most sediment supplied by the Ba Lat at present bypasses the Hai Hau erosional coastal zone, as the active part of the Ba Lat prodelta is detached from the coast SW of the Ba Lat. An active, NNE-SSW trending fault system with surface expression is located along the offshore edge of the prodelta, and is linked to deeper fault structures in this active neotectonic region. Subsurface reflectors are folded in the vicinity of the fault.

  13. Tomography of the Fermi-LAT γ-Ray Diffuse Extragalactic Signal via Cross Correlations with Galaxy Catalogs

    NASA Astrophysics Data System (ADS)

    Xia, Jun-Qing; Cuoco, Alessandro; Branchini, Enzo; Viel, Matteo

    2015-03-01

    Building on our previous cross-correlation analysis (Xia et al. 2011) between the isotropic γ-ray background (IGRB) and different tracers of the large-scale structure of the universe, we update our results using 60 months of data from the Large Area Telescope (LAT) on board the Fermi Gamma-ray Space Telescope (Fermi). We perform a cross-correlation analysis both in configuration and spherical harmonics space between the IGRB and objects that may trace the astrophysical sources of the IGRB: QSOs in the Sloan Digital Sky Survey (SDSS) DR6, the SDSS DR8 Main Galaxy Sample, luminous red galaxies (LRGs) in the SDSS catalog, infrared-selected galaxies in the Two Micron All Sky Survey (2MASS), and radio galaxies in the NRAO VLA Sky Survey (NVSS). The benefit of correlating the Fermi-LAT signal with catalogs of objects at various redshifts is to provide tomographic information on the IGRB, which is crucial in separating the various contributions and clarifying its origin. The main result is that, unlike in our previous analysis, we now observe a significant (>3.5σ) cross-correlation signal on angular scales smaller than 1° in the NVSS, 2MASS, and QSO cases and, at lower statistical significance (∼3.0σ), with SDSS galaxies. The signal is stronger in two energy bands, E > 0.5 GeV and E > 1 GeV, but it is also seen at E > 10 GeV. No cross-correlation signal is detected between Fermi data and the LRGs. These results are robust against the choice of the statistical estimator, estimate of errors, map cleaning procedure, and instrumental effects. Finally, we test the hypothesis that the IGRB observed by Fermi-LAT originates from the summed contributions of three types of unresolved extragalactic sources: BL Lacertae objects (BL Lacs), flat spectrum radio quasars (FSRQs), and star-forming galaxies (SFGs). We find that a model in which the IGRB is mainly produced by SFGs (72-37+23% with 2σ errors), with BL Lacs and FSRQs giving a minor contribution, provides a good fit to

  14. Spectral dependence of resolving power of optical method of detection of ultrasonically enhanced agglutination of human blood erythrocytes

    NASA Astrophysics Data System (ADS)

    Doubrovski, V. A.; Dvoretski, K. N.; Dolmashkin, A. A.

    2010-08-01

    The spectral dependence of the resolving power of an acoustooptic method of monitoring agglutination of human blood erythrocytes is studied theoretically and experimentally. It is shown that, in principle, the resolving power of this method can be increased by several dozen times. The results of the work can be used to create instruments for determining the human blood type in the AB0 system and in the Rhesus system.

  15. A technique for detection of agglutinating activity of antilymphocytic serum using formalinized and trypan-blue-stained lymphocytes

    PubMed Central

    Janković, B. D.; Isaković, Katarina; Petrović, Spomenka

    1970-01-01

    This paper describes technical details of a micro-reaction for the in vitro detection of agglutinating potency of antilymphocytic serum produced in rabbits with chicken, rat and dog thymus cells. The titration of antilymphocytic serum includes the use of microtitre plastic plates and lymphocytes treated with formalin and stained with trypan blue stain. Formalinized and stained lymphocytes represent a stable antigen of long durability, and the application of those cells in leucoagglutination increases the accuracy and sensitivity of the reaction. PMID:5477930

  16. Comparison of optomagnetic and AC susceptibility readouts in a magnetic nanoparticle agglutination assay for detection of C-reactive protein.

    PubMed

    Fock, Jeppe; Parmvi, Mattias; Strömberg, Mattias; Svedlindh, Peter; Donolato, Marco; Hansen, Mikkel Fougt

    2017-02-15

    There is an increasing need to develop biosensor methods that are highly sensitive and that can be combined with low-cost consumables. The use of magnetic nanoparticles (MNPs) is attractive because their detection is compatible with low-cost disposables and because application of a magnetic field can be used to accelerate assay kinetics. We present the first study and comparison of the performance of magnetic susceptibility measurements and a newly proposed optomagnetic method. For the comparison we use the C-reactive protein (CRP) induced agglutination of identical samples of 100nm MNPs conjugated with CRP antibodies. Both methods detect agglutination as a shift to lower frequencies in measurements of the dynamics in response to an applied oscillating magnetic field. The magnetic susceptibility method probes the magnetic response whereas the optomagnetic technique probes the modulation of laser light transmitted through the sample. The two techniques provided highly correlated results upon agglutination when they measure the decrease of the signal from the individual MNPs (turn-off detection strategy), whereas the techniques provided different results, strongly depending on the read-out frequency, when detecting the signal due to MNP agglomerates (turn-on detection strategy). These observations are considered to be caused by differences in the volume-dependence of the magnetic and optical signals from agglomerates. The highest signal from agglomerates was found in the optomagnetic signal at low frequencies.

  17. Agglutinating Activity and Structural Characterization of Scalarin, the Major Egg Protein of the Snail Pomacea scalaris (d’Orbigny, 1832)

    PubMed Central

    Ituarte, Santiago; Dreon, Marcos Sebastián; Ceolin, Marcelo; Heras, Horacio

    2012-01-01

    Apple snail perivitellins are emerging as ecologically important reproductive proteins. To elucidate if the protective functions of the egg proteins of Pomacea canaliculata (Caenogastropoda, Ampullariidae), involved in embryo defenses, are present in other Pomacea species we studied scalarin (PsSC), the major perivitellin of Pomacea scalaris. Using small angle X-ray scattering, fluorescence and absorption spectroscopy and biochemical methods, we analyzed PsSC structural stability, agglutinating activity, sugar specificity and protease resistance. PsSC aggluttinated rabbit, and, to a lesser extent, human B and A erythrocytes independently of divalent metals Ca2+ and Mg2+ were strongly inhibited by galactosamine and glucosamine. The protein was structurally stable between pH 2.0 to 10.0, though agglutination occurred only between pH 4.0 to 8.0 (maximum activity at pH 7.0). The agglutinating activity was conserved up to 60°C and completely lost above 80°C, in agreement with the structural thermal stability of the protein (up to 60°C). PsSC was able to withstand in vitro gastrointestinal digestion, and showed no trypsin inhibition activity. The presence of lectin activity has been reported in eggs of other Pomacea snails, but here we link for the first time, this activity to an apple snail multifunctional perivitellin. This novel role for a snail egg storage protein is different from closely related P.canaliculata defensive proteins. PMID:23185551

  18. 9 CFR 145.14 - Testing.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ...-typhoid shall be the standard tube agglutination test, the microagglutination test, the enzyme-linked... microtest antigens and enzyme-linked immunosorbent assay reagents shall also be approved by the Department... evaluated for pullorum-typhoid as follows: (i) Serum samples that react on rapid serum test or...

  19. 9 CFR 145.14 - Testing.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ...-typhoid shall be the standard tube agglutination test, the microagglutination test, the enzyme-linked... microtest antigens and enzyme-linked immunosorbent assay reagents shall also be approved by the Department... evaluated for pullorum-typhoid as follows: (i) Serum samples that react on rapid serum test or...

  20. Application of a spectrally filtered probing light beam and RGB decomposition of microphotographs for flow registration of ultrasonically enhanced agglutination of erythrocytes

    NASA Astrophysics Data System (ADS)

    Doubrovski, V. A.; Ganilova, Yu. A.; Zabenkov, I. V.

    2013-08-01

    We propose a development of the flow microscopy method to increase the resolving power upon registration of erythrocyte agglutination. We experimentally show that the action of a ultrasonic standing wave on an agglutinating mixture blood-serum leads to the formation of so large erythrocytic immune complexes that it seems possible to propose a new two-wave optical method of registration of the process of erythrocyte agglutination using the RGB decomposition of microphotographs of the flow of the mixture under study. This approach increases the reliability of registration of erythrocyte agglutination and, consequently, increases the reliability of blood typing. Our results can be used in the development of instruments for automatic human blood typing.

  1. L-Type amino acid transporter 1 (LAT1) expression in lymph node metastasis of gastric carcinoma: Its correlation with size of metastatic lesion and Ki-67 labeling.

    PubMed

    Ichinoe, Masaaki; Yanagisawa, Nobuyuki; Mikami, Tetuo; Hana, Kiyomi; Nakada, Norihiro; Endou, Hitoshi; Okayasu, Isao; Murakumo, Yoshiki

    2015-07-01

    L-Type amino acid transporter 1 (LAT1) is one of the major amino acid transporters. High levels of LAT1 expression have been reported in various tumors, which can act as a novel prognostic marker. Previously, we demonstrated that LAT1 is highly expressed in advanced gastric carcinoma with lymph node metastasis, and proposed that LAT1 is an independent prognostic factor in non-scirrhous gastric carcinoma. The aim of the present study was to investigate the relationship between LAT1 expression and the size of lymph node metastatic lesions in gastric carcinoma. LAT1 and Ki-67 expression was immunohistochemically analyzed in 64 cases of advanced gastric carcinoma with lymph node metastasis. LAT1 expression in the metastatic lymph nodes was correlated with that in the primary lesions. The high LAT1 expression group showed a larger size of metastatic lesion and a higher Ki-67 labeling index than the low LAT1 expression group. LAT1 expression had a weak association with Ki-67 labeling index and tumor diameter of lymph nodes. These results suggest that LAT1 expression is associated with disease progression in gastric carcinoma. We proposed that LAT1 could be a potential therapeutic target for gastric carcinoma cases with large lymph node metastasis.

  2. Taxonomic Notes on the Abyssal Agglutinated Benthic Foraminifera of the HEBBLE (High Energy Benthic Boundary Layer Experiment) Area (Lower Nova Scotian Continental Rise).

    DTIC Science & Technology

    1983-09-01

    Gulf of Mexico . Marine Sciences International, Woods Hole, Ma. Resig, J.M., 1981 Biogeography of benthic foraminifera of the northern Nazca plate and...HD-A133 743 TAXONOMIC NOTES ON THE ABYSSAL AGGLUTINATED BENTHIC t/i FORAMINIFERA OF-THE H..(U) WOODS HOLE OCEANOGRAPHIC INSTITUTION MRN M A KAMINSKI...Notes On The Abyssal Agglutinated Benthic Foraminifera September 1983 Of The HEBBLE Area (Lower Nova Scotian Continental Rise) 7. A41*heeW L Pinforv Mg

  3. A critical review of published methods for analysis of red cell antigen-antibody reactions by flow cytometry, and approaches for resolving problems with red cell agglutination.

    PubMed

    Arndt, Patricia A; Garratty, George

    2010-07-01

    Flow cytometry operators often apply familiar white blood cell (WBC) methods when studying red blood cell (RBC) antigens and antibodies. Some WBC methods are not appropriate for RBCs, as the analysis of RBCs requires special considerations, for example, avoidance of agglutination. One hundred seventy-six published articles from 88 groups studying RBC interactions were reviewed. Three fourths of groups used at least one unnecessary WBC procedure for RBCs, and about one fourth did not use any method to prevent/disperse RBC agglutination. Flow cytometric studies were performed to determine the effect of RBC agglutination on results and compare different methods of preventing and/or dispersing agglutination. The presence of RBC agglutinates have been shown to be affected by the type of pipette tip used for mixing RBC suspensions, the number of antigen sites/RBC, the type and concentration of primary antibody, and the type of secondary antibody. For quantitation methods, for example, fetal maternal hemorrhage, the presence of agglutinates have been shown to adversely affect results (fewer fetal D+ RBCs detected).

  4. A rhamnose-binding lectin from sea bass (Dicentrarchus labrax) plasma agglutinates and opsonizes pathogenic bacteria.

    PubMed

    Cammarata, Matteo; Parisi, Maria Giovanna; Benenati, Gigliola; Vasta, Gerardo R; Parrinello, Nicolò

    2014-06-01

    The discovery of rhamnose-binding lectins (RBLs) in teleost fish eggs led to the identification of a novel lectin family characterized by a unique sequence motif and a structural fold, and initially proposed to modulate fertilization. Further studies of the RBL tissue localization and gene organization were also suggestive of role(s) in innate immunity. Here we describe the purification, and biochemical and functional characterization of a novel RBL (DlRBL) from sea bass (Dicentrarchus labrax) serum. The purified DlRBL had electrophoretic mobilities corresponding to 24 kDa and 100 kDa under reducing and non-reducing conditions, respectively, suggesting that in plasma the DlRBL is present as a physiological homotetramer. DlRBL subunit transcripts revealed an open reading frame encoding 212 amino acid residues that included two tandemly-arrayed carbohydrate-recognition domains, and an 18-residue signal sequence at the N-terminus. The deduced size of 24.1 kDa for the mature protein was in good agreement with the subunit size of the isolated lectin. Binding activity of DlRBL for rabbit erythrocytes could be inhibited in the presence of rhamnose or galactose, did not require calcium, and was optimal at around 20°C and within the pH 6.5-8.0 range. DlRBL agglutinated Gram positive and Gram negative bacteria, and exposure of formalin-killed Escherichia coli to DlRBL enhanced their phagocytosis by D. labrax peritoneal macrophages relative to the unexposed controls. Taken together, the results suggest that plasma DlRBL may play a role in immune recognition of microbial pathogens and facilitate their clearance by phagocytosis.

  5. MicroRNA-181b promotes ovarian cancer cell growth and invasion by targeting LATS2.

    PubMed

    Xia, Ying; Gao, Yan

    2014-05-09

    MicroRNAs (miRNAs) are strongly implicated in tumorigenesis and metastasis. In this study, we showed significant upregulation of miR-181b in ovarian cancer tissues, compared with the normal ovarian counterparts. Forced expression of miR-181b led to remarkably enhanced proliferation and invasion of ovarian cancer cells while its knockdown induced significant suppression of these cellular events. The tumor suppressor gene, LATS2 (large tumor suppressor 2), was further identified as a novel direct target of miR-181b. Specifically, miR-181b bound directly to the 3'-untranslated region (UTR) of LATS2 and suppressed its expression. Restoration of LATS2 expression partially reversed the oncogenic effects of miR-181b. Our results indicate that miR-181b promotes proliferation and invasion by targeting LATS2 in ovarian cancer cells. These findings support the utility of miR-181b as a potential diagnostic and therapeutic target for ovarian cancer.

  6. Fermi LAT detection of renewed gamma-ray activity from PKS 2142-75

    NASA Astrophysics Data System (ADS)

    Ciprini, Stefano

    2014-05-01

    The Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, has observed high-level gamma-ray activity from a source positionally consistent with the flat spectrum radio quasar PKS 2142-75 (R.A.: 326.80304 deg, Dec.: -75.60367 deg, J2000, Johnston et al. ...

  7. Fermi LAT detection of renewed GeV activity from blazar 3C 279

    NASA Astrophysics Data System (ADS)

    Ciprini, Stefano; Gonzalez, Josefa Becerra

    2014-04-01

    The Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, has observed high-level gamma-ray activity from a source positionally consistent with the blazar 3C 279 (RA: 194.046527 deg, Dec: -5.789312 deg, J2000; Johnston et al.1995, AJ, 110, 880). ...

  8. Fermi LAT detection of a new Gamma-ray Source PKS B1251-713

    NASA Astrophysics Data System (ADS)

    Buson, S.

    2015-10-01

    The Large Area Telescope (LAT), on board the Fermi Gamma-ray Space Telescope, has observed strong gamma-ray emission from a source positionally consistent with the radio source PKS B1251-713 with coordinates RA=193.7496721 deg, Dec=-71.6384544 deg (J2000; Johnston et al. 1995, AJ, 110, 880).

  9. Novel Technique for Monitoring the Performance of the LAT Instrument on Board the GLAST Satellite

    SciTech Connect

    Paneque, D.; Borgland, A.; Bovier, A.; Bloom, E.; Edmonds, Y.; Funk, S.; Godfrey, G.; Rando, R.; Wai, L.; Wang, P.

    2007-06-13

    The Gamma-ray Large Area Space Telescope (GLAST) is an observatory designed to perform gamma-ray astronomy in the energy range 20 MeV to 300 GeV, with supporting measurements for gamma-ray bursts from 10 keV to 25 MeV. GLAST will be launched at the end of 2007, opening a new and important window on a wide variety of high energy astrophysical phenomena . The main instrument of GLAST is the Large Area Telescope (LAT), which provides break-through high-energy measurements using techniques typically used in particle detectors for collider experiments. The LAT consists of 16 identical towers in a four-by-four grid, each one containing a pair conversion tracker and a hodoscopic crystal calorimeter, all covered by a segmented plastic scintillator anti-coincidence shield. The scientific return of the instrument depends very much on how accurately we know its performance, and how well we can monitor it and correct potential problems promptly. We report on a novel technique that we are developing to help in the characterization and monitoring of LAT by using the power of classification trees to pinpoint in a short time potential problems in the recorded data. The same technique could also be used to evaluate the effect on the overall LAT performance produced by potential instrumental problems.

  10. Fermi LAT Gamma-ray Observations of IceCube-160731

    NASA Astrophysics Data System (ADS)

    Cheung, C. C.; Toomey, M. W.; Kocevski, D.; Buson, S.

    2016-08-01

    We report follow-up of the extremely high-energy (EHE) IceCube-160731 neutrino event (AMON GCN notice; http://gcn.gsfc.nasa.gov/notices_amon/6888376_128290.amon) with all-sky survey data from the Large Area Telescope (LAT), on board the Fermi Gamma-ray Space Telescope.

  11. VizieR Online Data Catalog: Fermi LAT third source catalog (3FGL) (Acero+, 2015)

    NASA Astrophysics Data System (ADS)

    Acero, F.; Ackermann, M.; Ajello, M.; Albert, A.; Atwood, W. B.; Axelsson, M.; Baldini, L.; Ballet, J.; Barbiellini, G.; Bastieri, D.; Belfiore, A.; Bellazzini, R.; Bissaldi, E.; Blandford, R. D.; Bloom, E. D.; Bogart, J. R.; Bonino, R.; Bottacini, E.; Bregeon, J.; Britto, R. J.; Bruel, P.; Buehler, R.; Burnett, T. H.; Buson, S.; Caliandro, G. A.; Cameron, R. A.; Caputo, R.; Caragiulo, M.; Caraveo, P. A.; Casandjian, J. M.; Cavazzuti, E.; Charles, E.; Chaves, R. C. G.; Chekhtman, A.; Cheung, C. C.; Chiang, J.; Chiaro, G.; Ciprini, S.; Claus, R.; Cohen-Tanugi, J.; Cominsky, L. R.; Conrad, J.; Cutini, S.; D'Ammando, F.; de Angelis, A.; Deklotz, M.; de Palma, F.; Desiante, R.; Digel, S. W.; di Venere, L.; Drell, P. S.; Dubois, R.; Dumora, D.; Favuzzi, C.; Fegan, S. J.; Ferrara, E. C.; Finke, J.; Franckowiak, A.; Fukazawa, Y.; Funk, S.; Fusco, P.; Gargano, F.; Gasparrini, D.; Giebels, B.; Giglietto, N.; Giommi, P.; Giordano, F.; Giroletti, M.; Glanzman, T.; Godfrey, G.; Grenier, I. A.; Grondin, M.-H.; Grove, J. E.; Guillemot, L.; Guiriec, S.; Hadasch, D.; Harding, A. K.; Hays, E.; Hewitt, J. W.; Hill, A. B.; Horan, D.; Iafrate, G.; Jogler, T.; Johannesson, G.; Johnson, R. P.; Johnson, A. S.; Johnson, T. J.; Johnson, W. N.; Kamae, T.; Kataoka, J.; Katsuta, J.; Kuss, M.; La Mura, G.; Landriu, D.; Larsson, S.; Latronico, L.; Lemoine-Goumard, M.; Li, J.; Li, L.; Longo, F.; Loparco, F.; Lott, B.; Lovellette, M. N.; Lubrano, P.; Madejski, G. M.; Massaro, F.; Mayer, M.; Mazziotta, M. N.; McEnery, J. E.; Michelson, P. F.; Mirabal, N.; Mizuno, T.; Moiseev, A. A.; Mongelli, M.; Monzani, M. E.; Morselli, A.; Moskalenko, I. V.; Murgia, S.; Nuss, E.; Ohno, M.; Ohsugi, T.; Omodei, N.; Orienti, M.; Orlando, E.; Ormes, J. F.; Paneque, D.; Panetta, J. H.; Perkins, J. S.; Pesce-Rollins, M.; Piron, F.; Pivato, G.; Porter, T. A.; Racusin, J. L.; Rando, R.; Razzano, M.; Razzaque, S.; Reimer, A.; Reimer, O.; Reposeur, T.; Rochester, L. S.; Romani, R. W.; Salvetti, D.; Sanchez-Conde, M.; Saz Parkinson, P. M.; Schulz, A.; Siskind, E. J.; Smith, D. A.; Spada, F.; Spandre, G.; Spinelli, P.; Stephens, T. E.; Strong, A. W.; Suson, D. J.; Takahashi, H.; Takahashi, T.; Tanaka, Y.; Thayer J. G, .; Thayer, J. B.; Thompson, D. J.; Tibaldo, L.; Tibolla, O.; Torres, D. F.; Torresi, E.; Tosti, G.; Troja, E.; van Klaveren, B.; Vianello, G.; Winer, B. L.; Wood, K. S.; Wood, M.; Zimmer, S.

    2015-08-01

    The data for the 3FGL catalog were taken during the period from 2008 August 4 (15:43 UTC) to 2012 July 31 (22:46 UTC), to covering close to 4yr. The LAT detects γ-rays in the energy range from 20MeV to more than 300GeV. (3 data files).

  12. FERMI-LAT SEARCH FOR PULSAR WIND NEBULAE AROUND GAMMA-RAY PULSARS

    SciTech Connect

    Ackermann, M.; Ajello, M.; Bechtol, K.; Berenji, B.; Bloom, E. D.; Borgland, A. W.; Bouvier, A.; Buehler, R.; Baldini, L.; Bellazzini, R.; Bregeon, J.; Brez, A.; Ballet, J.; Bastieri, D.; Buson, S.; Bonamente, E.; Brigida, M.; Bruel, P.

    2011-01-01

    The high sensitivity of the Fermi-LAT (Large Area Telescope) offers the first opportunity to study faint and extended GeV sources such as pulsar wind nebulae (PWNe). After one year of observation the LAT detected and identified three PWNe: the Crab Nebula, Vela-X, and the PWN inside MSH 15-52. In the meantime, the list of LAT detected pulsars increased steadily. These pulsars are characterized by high energy loss rates ( E-dot ) from {approx}3 x 10{sup 33} erg s{sup -1} to 5 x 10{sup 38} erg s{sup -1} and are therefore likely to power a PWN. This paper summarizes the search for PWNe in the off-pulse windows of 54 LAT-detected pulsars using 16 months of survey observations. Ten sources show significant emission, seven of these likely being of magnetospheric origin. The detection of significant emission in the off-pulse interval offers new constraints on the {gamma}-ray emitting regions in pulsar magnetospheres. The three other sources with significant emission are the Crab Nebula, Vela-X, and a new PWN candidate associated with the LAT pulsar PSR J1023-5746, coincident with the TeV source HESS J1023-575. We further explore the association between the HESS and the Fermi source by modeling its spectral energy distribution. Flux upper limits derived for the 44 remaining sources are used to provide new constraints on famous PWNe that have been detected at keV and/or TeV energies.

  13. MiR-93 enhances angiogenesis and metastasis by targeting LATS2

    PubMed Central

    Fang, Ling; Du, William W.; Yang, Weining; Rutnam, Zina Jeyapalan; Peng, Chun; Li, Haoran; O'Malley, Yunxia Q.; Askeland, Ryan W.; Sugg, Sonia; Liu, Mingyao; Mehta, Tanvi; Deng, Zhaoqun; Yang, Burton B.

    2012-01-01

    Here we report that miR-93, a miRNA in the miR-106B~25 cluster, a paralog of the miR-17–92 cluster, was significantly upregulated in human breast carcinoma tissues. We stably expressed miR-93 in the MT-1 human breast carcinoma cell line and found that tumors formed by the miR-93 cells contained more blood vessels than those formed by the control cells. Co-culture experiments indicated that the MT-1 cells displayed a high activity of adhesion with endothelial cells and could form larger and more tube-like structures with endothelial cells. Lung metastasis assays were performed in a mouse metastatic model, and it was found that expression of miR-93 promoted tumor cell metastasis to lung tissue. In cell culture, expression of miR-93 enhanced cell survival and invasion. We examined the potential target that mediated miR-93’s effects and found that the large tumor suppressor, homology 2 (LATS2) was a target of miR-93. Higher levels of LATS2 were associated with cell death in the tumor mass. Silencing LATS2 expression promoted cell survival, tube formation and invasion, while ectopic expression of LATS2 decreased cell survival and invasion. These findings demonstrated that miR-93 promoted tumor angiogenesis and metastasis by suppressing LATS2 expression. Our results suggest that the inhibition of miR-93 function may be a feasible approach to repress tumor metastasis. PMID:23111389

  14. MiR-93 enhances angiogenesis and metastasis by targeting LATS2.

    PubMed

    Fang, Ling; Du, William W; Yang, Weining; Rutnam, Zina Jeyapalan; Peng, Chun; Li, Haoran; O'Malley, Yunxia Q; Askeland, Ryan W; Sugg, Sonia; Liu, Mingyao; Mehta, Tanvi; Deng, Zhaoqun; Yang, Burton B

    2012-12-01

    Here we report that miR-93, a miRNA in the miR-106B~25 cluster, a paralog of the miR-17-92 cluster, was significantly upregulated in human breast carcinoma tissues. We stably expressed miR-93 in the MT-1 human breast carcinoma cell line and found that tumors formed by the miR-93 cells contained more blood vessels than those formed by the control cells. Co-culture experiments indicated that the MT-1 cells displayed a high activity of adhesion with endothelial cells and could form larger and more tube-like structures with endothelial cells. Lung metastasis assays were performed in a mouse metastatic model, and it was found that expression of miR-93 promoted tumor cell metastasis to lung tissue. In cell culture, expression of miR-93 enhanced cell survival and invasion. We examined the potential target that mediated miR-93's effects and found that the large tumor suppressor, homology 2 (LATS2) was a target of miR-93. Higher levels of LATS2 were associated with cell death in the tumor mass. Silencing LATS2 expression promoted cell survival, tube formation and invasion, while ectopic expression of LATS2 decreased cell survival and invasion. These findings demonstrated that miR-93 promoted tumor angiogenesis and metastasis by suppressing LATS2 expression. Our results suggest that the inhibition of miR-93 function may be a feasible approach to repress tumor metastasis.

  15. NEDD4 E3 ligase inhibits the activity of the Hippo pathway by targeting LATS1 for degradation.

    PubMed

    Salah, Zaidoun; Cohen, Sherri; Itzhaki, Ella; Aqeilan, Rami I

    2013-12-15

    Proper regulation of cell proliferation, cell apoptosis, and cell death are vital for the development and survival of living organisms. Failure or dysfunction of any of these processes can have devastating effects, including cancer. The Hippo pathway, first discovered in Drosophila, has been found to be a major growth-regulatory signaling pathway that controls these crucial processes and has been implicated in cell-progress regulation and organ size determination. Abnormal regulation of this pathway has been found in several cancer types. However, the mechanisms that regulate the pathway and its core members yet have to be elucidated. One of the main core components of this pathway is LATS1, a serine/threonine kinase. Therefore, understanding how LATS1 activity is regulated is expected to shed light on new mechanisms that regulate the Hippo pathway. In the current work, we identified several potential LATS1 regulators and proved that NEDD4 E3 ubiquitin ligase controls LATS1 stability. We demonstrate that NEDD4 directly interacts with LATS1, leading to ubiquitination and decreased levels of LATS1 and, thus, increased YAP localization in the nucleus, which subsequently increases the transcriptional activity of YAP. As such, we show that NEDD4 acts as an additional regulator of the Hippo pathway on the protein level via interactions between WW domain-containing and PPxY motif-containing proteins. These findings might be applied in the development of new therapeutic approaches through the activation of LATS1.

  16. NEDD4 E3 ligase inhibits the activity of the Hippo pathway by targeting LATS1 for degradation

    PubMed Central

    Salah, Zaidoun; Cohen, Sherri; Itzhaki, Ella; Aqeilan, Rami I

    2013-01-01

    Proper regulation of cell proliferation, cell apoptosis, and cell death are vital for the development and survival of living organisms. Failure or dysfunction of any of these processes can have devastating effects, including cancer. The Hippo pathway, first discovered in Drosophila, has been found to be a major growth-regulatory signaling pathway that controls these crucial processes and has been implicated in cell-progress regulation and organ size determination. Abnormal regulation of this pathway has been found in several cancer types. However, the mechanisms that regulate the pathway and its core members yet have to be elucidated. One of the main core components of this pathway is LATS1, a serine/threonine kinase. Therefore, understanding how LATS1 activity is regulated is expected to shed light on new mechanisms that regulate the Hippo pathway. In the current work, we identified several potential LATS1 regulators and proved that NEDD4 E3 ubiquitin ligase controls LATS1 stability. We demonstrate that NEDD4 directly interacts with LATS1, leading to ubiquitination and decreased levels of LATS1 and, thus, increased YAP localization in the nucleus, which subsequently increases the transcriptional activity of YAP. As such, we show that NEDD4 acts as an additional regulator of the Hippo pathway on the protein level via interactions between WW domain-containing and PPxY motif-containing proteins. These findings might be applied in the development of new therapeutic approaches through the activation of LATS1. PMID:24107629

  17. Dephosphorylation of the adaptor LAT and phospholipase C-γ by SHP-1 inhibits natural killer cell cytotoxicity.

    PubMed

    Matalon, Omri; Fried, Sophia; Ben-Shmuel, Aviad; Pauker, Maor H; Joseph, Noah; Keizer, Danielle; Piterburg, Marina; Barda-Saad, Mira

    2016-05-24

    Natural killer (NK) cells discriminate between healthy cells and virally infected or transformed self-cells by tuning activating and inhibitory signals received through cell surface receptors. Inhibitory receptors inhibit NK cell function by recruiting and activating the tyrosine phosphatase Src homology 2 (SH2) domain-containing protein tyrosine phosphatase-1 (SHP-1) to the plasma membrane. However, to date, the guanine nucleotide exchange factor VAV1 is the only direct SHP-1 substrate identified in NK cells. We reveal that the adaptor protein linker for activation of T cells (LAT) as well as phospholipase C-γ1 (PLC-γ1) and PLC-γ2 are SHP-1 substrates. Dephosphorylation of Tyr(132) in LAT by SHP-1 in NK cells abrogated the recruitment of PLC-γ1 and PLC-γ2 to the immunological synapse between the NK cell and a cancer cell target, which reduced NK cell degranulation and target cell killing. Furthermore, the ubiquitylation of LAT by the E3 ubiquitin ligases c-Cbl and Cbl-b, which was induced by LAT phosphorylation, led to the degradation of LAT in response to the engagement of inhibitory receptors on NK cells, which abrogated NK cell cytotoxicity. Knockdown of the Cbl proteins blocked LAT ubiquitylation, which promoted NK cell function. Expression of a ubiquitylation-resistant mutant LAT blocked inhibitory receptor signaling, enabling cells to become activated. Together, these data identify previously uncharacterized SHP-1 substrates and inhibitory mechanisms that determine the response of NK cells.

  18. Brain interstitial fluid glutamine homeostasis is controlled by blood-brain barrier SLC7A5/LAT1 amino acid transporter.

    PubMed

    Dolgodilina, Elena; Imobersteg, Stefan; Laczko, Endre; Welt, Tobias; Verrey, Francois; Makrides, Victoria

    2016-11-01

    L-glutamine (Gln) is the most abundant amino acid in plasma and cerebrospinal fluid and a precursor for the main central nervous system excitatory (L-glutamate) and inhibitory (γ-aminobutyric acid (GABA)) neurotransmitters. Concentrations of Gln and 13 other brain interstitial fluid amino acids were measured in awake, freely moving mice by hippocampal microdialysis using an extrapolation to zero flow rate method. Interstitial fluid levels for all amino acids including Gln were ∼5-10 times lower than in cerebrospinal fluid. Although the large increase in plasma Gln by intraperitoneal (IP) injection of (15)N2-labeled Gln (hGln) did not increase total interstitial fluid Gln, low levels of hGln were detected in microdialysis samples. Competitive inhibition of system A (SLC38A1&2; SNAT1&2) or system L (SLC7A5&8; LAT1&2) transporters in brain by perfusion with α-(methylamino)-isobutyric acid (MeAIB) or 2-aminobicyclo-(2,2,1)-heptane-2-carboxylic acid (BCH) respectively, was tested. The data showed a significantly greater increase in interstitial fluid Gln upon BCH than MeAIB treatment. Furthermore, brain BCH perfusion also strongly increased the influx of hGln into interstitial fluid following IP injection consistent with transstimulation of LAT1-mediated transendothelial transport. Taken together, the data support the independent homeostatic regulation of amino acids in interstitial fluid vs. cerebrospinal fluid and the role of the blood-brain barrier expressed SLC7A5/LAT1 as a key interstitial fluid gatekeeper.

  19. A sugar-functionalized amphiphilic pillar[5]arene: synthesis, self-assembly in water, and application in bacterial cell agglutination.

    PubMed

    Yu, Guocan; Ma, Yingjie; Han, Chengyou; Yao, Yong; Tang, Guping; Mao, Zhengwei; Gao, Changyou; Huang, Feihe

    2013-07-17

    A novel sugar-functionalized amphiphilic pillar[5]arene containing galactose groups as the hydrophlic part and alkyl chains as the hydrophobic part was designed and synthesized. It self-assembles in water to produce nanotubes as confirmed by TEM, SEM, and fluorescence microscopy. These nanotubes, showing low toxicity to both cancer and normal cells, can be utilized as excellent cell glues to agglutinate E. coli. The existence of galactoses on these nanotubes provides multivalent ligands that have high affinity for carbohydrate receptors on E. coli.

  20. New Results on High Energy Cosmic Ray Electrons Observed with Fermi LAT and Their Implications on the Models of Pulsars

    NASA Technical Reports Server (NTRS)

    Moiseev, Alexander

    2010-01-01

    This viewgraph presentation describes, in detail, the Fermi Large Area Telescope (LAT) and GLAST Burst Monitor (GBM). Observations made from the June 11, 2008 launch and a discussion of observations made of high energy cosmic ray electrons is also presented.

  1. Identifying Unidentified Fermi-LAT Objects (UFOs) at High-Latitude

    NASA Astrophysics Data System (ADS)

    Cheung, Chi Teddy

    2009-09-01

    We propose a Chandra study of 8 high Galactic latitude gamma-ray sources in the Fermi-LAT bright source list. These sources are currently unidentified, i.e., they are not clearly associated with established classes of gamma-ray emitters like blazars and pulsars. The proposed observations will determine the basic properties (fluxes, positions, hardness ratio/spectra) of all X-ray sources down to a 0.3-10 keV flux limit of 1.5e-14 erg/cm2/s within the Fermi-LAT localization circles. This will enable further follow-up at other wavelengths, with the ultimate goal to reveal the nature of these enigmatic gamma-ray sources.

  2. Fermi LAT Results and Perspectives in Measurements of High Energy Galactic Cosmic Rays

    NASA Technical Reports Server (NTRS)

    Moiseev, Alexander

    2010-01-01

    Real breakthrough during last 1-1.5 years in cosmic ray electrons: ATIC, HESS, Pamela, and finally Fermi-LAT. New quality data have made it possible to start quantitative modeling. With the new data more puzzles than before on CR electrons origin. Need "multi-messenger" campaign: electrons, positrons, gammas, X-ray, radio, neutrino... It is viable that we are dealing with at least two distinct mechanisms of "primary" electron (both signs) production: a softer spectrum of negative electrons, and a harder spectrum of both e(+)+e(-). Exotic (e.g. DM) origin is not ruled out. Upper limits on CR electrons anisotropy are set. Good perspectives to have the Fermi LAT results on proton spectrum and positron fraction.

  3. Precursors in gamma-ray bursts detected by the Fermi-LAT and GBM

    NASA Astrophysics Data System (ADS)

    Zhu, Sylvia; Fermi Large Area Telescope Collaboration

    2015-04-01

    Many aspects of gamma-ray bursts (GRBs) remain mysterious more than 40 years after their initial discovery. However, observations of GRBs by the Fermi Large Area Telescope (LAT) and Gamma-ray Burst Monitor (GBM) have uncovered new information about the observed properties and the underlying physics. In a small minority (roughly 5-20%), a dim, temporally distinct precursor peak occurs before the brightest part of the prompt emission in the keV-MeV range. The origin of precursors is still unknown, and studies of precursors can probe the formation of the GRB central engine and/or the nature of the jets that produce the emission. We present a systematic search for precursor emission in LAT and GBM data, and the temporal and spectral properties and energetics of the population of GRBs with precursors.

  4. GBM First-year Catalogs (with Some LAT GRB Catalogs as a Bonus)

    NASA Astrophysics Data System (ADS)

    Paciesas, William Simon; GBM, Fermi; LAT Collaborations

    2010-03-01

    The Fermi Gamma-ray Burst Monitor (GBM) monitors the entire unocculted sky for transient activity in the energy range from 8 keV to 40 MeV. In its first year of operation GBM's on-board trigger detected 253 gamma-ray bursts (GRBs), of which 9 were confidently detected by the LAT (a catalog of LAT upper limits for non-detected GRBs is also available). In addition, GBM triggered on 12 terrestrial gamma flashes and 168 soft gamma repeater events from four different magnetar candidates. GBM's continuous data collection over the entire sky allows continual hard X-ray monitoring of both steady and variable sources using Earth occultation and pulsed source analysis techniques. Catalogs of the GBM-detected source categories will be summarized and, if time permits, compared with relevant catalogs from other instruments such as CGRO/BATSE.

  5. Optical spectroscopic classification of a selection of Southern Hemisphere Fermi-LAT unclassified blazars

    NASA Astrophysics Data System (ADS)

    Klindt, L.; van Soelen, B.; Meintjes, P. J.; Väisänen, P.

    2017-01-01

    The Fermi-LAT has detected more than 3000 sources in the GeV γ-ray regime. The majority are extra-galactic and these sources are dominated by blazars. However, ˜28 per cent of the sources in Fermi 3LAC are listed as blazar candidates of uncertain type (BCU). Increasing the number of classified Fermi-LAT sources is important for improving our understanding of extra-galactic γ-ray sources and can be used to search for new very high energy sources. We report on the optical spectroscopy of seven selected unclassified BCU sources during 2014 and 2015 undertaken using the SAAO 1.9-m and Southern African Large Telescope (SALT). Based on the identified spectral lines we have classified three of the sources as FSRQs and the remaining four as BL Lac objects, determining the redshift for four sources.

  6. Fermi-LAT confirmation of enhanced gamma-ray activity from the Crab nebula

    NASA Astrophysics Data System (ADS)

    Cheung, C. C.

    2016-10-01

    Preliminary LAT analysis confirms the recent enhanced gamma-ray activity from the Crab nebula detected by AGILE (ATel #9586). The daily-averaged gamma-ray fluxes (E > 100 MeV) from the direction of the Crab Nebula were (4.8 +/- 0.5) x 10^-6 ph cm^-2 s^-1 (Sep 30), (3.3 +/- 0.4) x 10^-6 ph cm^-2 s^-1 (Oct 1), and (4.5 +/- 0.5) x 10^-6 ph cm^-2 s^-1 (Oct 2). These are up to a factor of ~1.8 greater than the average gamma-ray flux of (2.71 +/- 0.02) x 10^-6 ph cm^-2 s^-1 reported in the third Fermi-LAT source catalog (Acero et al. 2015, ApJS, 218, 23). All fluxes given are the sums of the pulsar and nebular emission, and with statistical uncertainties only.

  7. Detection of 16 gamma-ray pulsars through blind frequency searches using the Fermi LAT.

    PubMed

    Abdo, A A; Ackermann, M; Ajello, M; Anderson, B; Atwood, W B; Axelsson, M; Baldini, L; Ballet, J; Barbiellini, G; Baring, M G; Bastieri, D; Baughman, B M; Bechtol, K; Bellazzini, R; Berenji, B; Bignami, G F; Blandford, R D; Bloom, E D; Bonamente, E; Borgland, A W; Bregeon, J; Brez, A; Brigida, M; Bruel, P; Burnett, T H; Caliandro, G A; Cameron, R A; Caraveo, P A; Casandjian, J M; Cecchi, C; Celik, O; Chekhtman, A; Cheung, C C; Chiang, J; Ciprini, S; Claus, R; Cohen-Tanugi, J; Conrad, J; Cutini, S; Dermer, C D; de Angelis, A; de Luca, A; de Palma, F; Digel, S W; Dormody, M; do Couto e Silva, E; Drell, P S; Dubois, R; Dumora, D; Farnier, C; Favuzzi, C; Fegan, S J; Fukazawa, Y; Funk, S; Fusco, P; Gargano, F; Gasparrini, D; Gehrels, N; Germani, S; Giebels, B; Giglietto, N; Giommi, P; Giordano, F; Glanzman, T; Godfrey, G; Grenier, I A; Grondin, M-H; Grove, J E; Guillemot, L; Guiriec, S; Gwon, C; Hanabata, Y; Harding, A K; Hayashida, M; Hays, E; Hughes, R E; Jóhannesson, G; Johnson, R P; Johnson, T J; Johnson, W N; Kamae, T; Katagiri, H; Kataoka, J; Kawai, N; Kerr, M; Knödlseder, J; Kocian, M L; Kuss, M; Lande, J; Latronico, L; Lemoine-Goumard, M; Longo, F; Loparco, F; Lott, B; Lovellette, M N; Lubrano, P; Madejski, G M; Makeev, A; Marelli, M; Mazziotta, M N; McConville, W; McEnery, J E; Meurer, C; Michelson, P F; Mitthumsiri, W; Mizuno, T; Monte, C; Monzani, M E; Morselli, A; Moskalenko, I V; Murgia, S; Nolan, P L; Norris, J P; Nuss, E; Ohsugi, T; Omodei, N; Orlando, E; Ormes, J F; Paneque, D; Parent, D; Pelassa, V; Pepe, M; Pesce-Rollins, M; Pierbattista, M; Piron, F; Porter, T A; Primack, J R; Rainò, S; Rando, R; Ray, P S; Razzano, M; Rea, N; Reimer, A; Reimer, O; Reposeur, T; Ritz, S; Rochester, L S; Rodriguez, A Y; Romani, R W; Ryde, F; Sadrozinski, H F-W; Sanchez, D; Sander, A; Saz Parkinson, P M; Scargle, J D; Sgrò, C; Siskind, E J; Smith, D A; Smith, P D; Spandre, G; Spinelli, P; Starck, J-L; Strickman, M S; Suson, D J; Tajima, H; Takahashi, H; Takahashi, T; Tanaka, T; Thayer, J G; Thompson, D J; Tibaldo, L; Tibolla, O; Torres, D F; Tosti, G; Tramacere, A; Uchiyama, Y; Usher, T L; Van Etten, A; Vasileiou, V; Vilchez, N; Vitale, V; Waite, A P; Wang, P; Watters, K; Winer, B L; Wolff, M T; Wood, K S; Ylinen, T; Ziegler, M

    2009-08-14

    Pulsars are rapidly rotating, highly magnetized neutron stars emitting radiation across the electromagnetic spectrum. Although there are more than 1800 known radio pulsars, until recently only seven were observed to pulse in gamma rays, and these were all discovered at other wavelengths. The Fermi Large Area Telescope (LAT) makes it possible to pinpoint neutron stars through their gamma-ray pulsations. We report the detection of 16 gamma-ray pulsars in blind frequency searches using the LAT. Most of these pulsars are coincident with previously unidentified gamma-ray sources, and many are associated with supernova remnants. Direct detection of gamma-ray pulsars enables studies of emission mechanisms, population statistics, and the energetics of pulsar wind nebulae and supernova remnants.

  8. Lats1/2 Regulate Yap/Taz to Control Nephron Progenitor Epithelialization and Inhibit Myofibroblast Formation.

    PubMed

    McNeill, Helen; Reginensi, Antoine

    2017-03-01

    In the kidney, formation of the functional filtration units, the nephrons, is essential for postnatal life. During development, mesenchymal progenitors tightly regulate the balance between self-renewal and differentiation to give rise to all nephron epithelia. Here, we investigated the functions of the Hippo pathway serine/threonine-protein kinases Lats1 and Lats2, which phosphorylate and inhibit the transcriptional coactivators Yap and Taz, in nephron progenitor cells. Genetic deletion of Lats1 and Lats2 in nephron progenitors of mice led to disruption of nephrogenesis, with an accumulation of spindle-shaped cells in both cortical and medullary regions of the kidney. Lineage-tracing experiments revealed that the cells that accumulated in the interstitium derived from nephron progenitor cells and expressed E-cadherin as well as vimentin, a myofibroblastic marker not usually detected after mesenchymal-to-epithelial transition. The accumulation of these interstitial cells associated with collagen deposition and ectopic expression of the myofibroblastic markers vimentin and α-smooth-muscle actin in developing kidneys. Although these myofibroblastic cells had high Yap and Taz accumulation in the nucleus concomitant with a loss of phosphorylated Yap, reduction of Yap and/or Taz expression levels completely rescued the Lats1/2 phenotype. Taken together, our results demonstrate that Lats1/2 kinases restrict Yap/Taz activities to promote nephron progenitor cell differentiation in the mammalian kidney. Notably, our data also show that myofibroblastic cells can differentiate from nephron progenitors.

  9. Fermi LAT detection of renewed and strong GeV activity from blazar 3C 279

    NASA Astrophysics Data System (ADS)

    Cutini, Sara

    2015-06-01

    The Large Area Telescope (LAT), one of two instruments on the Fermi Gamma-ray Space Telescope, has observed an intense gamma-ray flare from a source positionally consistent with the flat spectrum radio quasar 3C 279, also known as 3FGL J1256.1-0547 (Acero et al. 2015, APJS, 218, 23), with radio coordinates R.A.: 194.0465271 deg, Dec: -5.7893119 deg (J2000.0; Johnston et al. 1995, AJ, 110, 880).

  10. The Synergy between the LAT and GBM in GLAST's Study of Gamma-Ray Bursts

    NASA Technical Reports Server (NTRS)

    Band, David L.

    2007-01-01

    Using semi-analytic calculations I characterize the gamma-ray bursts to which GLAST's LAT and GBM detectors will be sensitive. The thresholds of both instruments are at approximately the same vfv proportional to E(sup 2)N(E) values, i.e., the thresholds can be connected by an E(sup -2) spectrum. Therefore simultaneous detections by both instruments will be biased towards spectral components flatter than E(sup -2).

  11. Insights into the Antimicrobial Mechanism of Action of Human RNase6: Structural Determinants for Bacterial Cell Agglutination and Membrane Permeation

    PubMed Central

    Pulido, David; Arranz-Trullén, Javier; Prats-Ejarque, Guillem; Velázquez, Diego; Torrent, Marc; Moussaoui, Mohammed; Boix, Ester

    2016-01-01

    Human Ribonuclease 6 is a secreted protein belonging to the ribonuclease A (RNaseA) superfamily, a vertebrate specific family suggested to arise with an ancestral host defense role. Tissue distribution analysis revealed its expression in innate cell types, showing abundance in monocytes and neutrophils. Recent evidence of induction of the protein expression by bacterial infection suggested an antipathogen function in vivo. In our laboratory, the antimicrobial properties of the protein have been evaluated against Gram-negative and Gram-positive species and its mechanism of action was characterized using a membrane model. Interestingly, our results indicate that RNase6, as previously reported for RNase3, is able to specifically agglutinate Gram-negative bacteria as a main trait of its antimicrobial activity. Moreover, a side by side comparative analysis with the RN6(1–45) derived peptide highlights that the antimicrobial activity is mostly retained at the protein N-terminus. Further work by site directed mutagenesis and structural analysis has identified two residues involved in the protein antimicrobial action (Trp1 and Ile13) that are essential for the cell agglutination properties. This is the first structure-functional characterization of RNase6 antimicrobial properties, supporting its contribution to the infection focus clearance. PMID:27089320

  12. Study of polycation effects on erythrocyte agglutination mediated by anti-glycophorins using microscopic image digital analysis

    NASA Astrophysics Data System (ADS)

    Riquelme, B.; Dumas, D.; Relancio, F.; Fontana, A.; Alessi, A.; Foresto, P.; Grandfils, C.; Stoltz, J.; Valverde, J.

    2006-04-01

    The aim of this work was to study synthetic polycation effects on erythrocyte agglutination mediated by anti-glycophorin using image digital analysis. Polycations are oligomers or polymers of natural or synthetic origin, which bear a great number of positive charges at pH 7.4. Several of these polycations are nowadays used in clinic for human and veterinary purposes. New applications of polycations to the development of new drug delivery systems are investigated, in order to promote the drug absorption through the gastro-intestinal and blood brain barriers. However, up to now, there are no clear relationships between macromolecular features of polycations (molecular weight, mean charge density, charge repartition, etc.) and their interactions with blood elements (which bear superficial negative charges). The interaction on the red blood cell membrane with synthetic polycations having well-controlled macromolecular features and functionalized with pendent polyethylene glycol segments was investigated. The alterations over stationary and dynamic viscoelastic properties of erythrocyte membranes were analyzed through laser diffractometry. Image digital analysis was used to study erythrocyte agglutination mediated by anti-glycophorin. Results show different reactivities of the polycations on the erythrocyte membrane. These findings could provide more information about the mechanisms of polycation interaction on erythrocyte membranes. We consider that this work could provide useful tools to understand and improve the haemocompatibility of polycations and enlarge their potential in clinic.

  13. [AGGLUTINATION OF MESOPHYLL PLASTIDS AND OBLITERATION OF PHLOEM SIEVE TUBES ARE THE TOTAL RESULT OF SEASONAL PAUSES IN PHOTOSYNTHATE EXPORT].

    PubMed

    Gamalei, Yu V

    2015-01-01

    Chloroplast agglutination and sieve tube obliteration are related to the different plant tissues: the agglutination--to the leaf mesophyll, and the obliteration--to the axis phloem. Being equally produced by photosynthate export dynamics, both phenomena are synchronous and can be used for diagnostics of seasonal flashes and pauses of photosynthetic activity with equal success. The nature of the mobility of chloroplast and their shuttle displacements from the nuclear envelope to the cell periphery connected with export dynamics have been established. It is assumed that nuclear envelope is the base structure of the endoplasmic reticulum (ER) inside which the chloroplasts are localized. Activation of photosynthesis and sugar accumulation inside the ER induces its expansion followed by centrifugal diffusion of chloroplasts. Come back effect--ER collapse, its return to the source--can be induced by the blockade of photosynthesis. Centripetal collapse is accompanied by plastid concentration around the nuclear envelope. Displacements of ER and the chloroplasts dislocating inside it are reversible. It depends on seasonal fluctuations of photosynthesis and export intensities. Changes in the volume of sieve tubes, which are due to the same reason, are irreversible. Each seasonal wave of photosynthesis and sugar export forms new series of sieve tubes, replacing obliterated ones.

  14. siRNA delivery targeting to the lung via agglutination-induced accumulation and clearance of cationic tetraamino fullerene

    NASA Astrophysics Data System (ADS)

    Minami, Kosuke; Okamoto, Koji; Doi, Kent; Harano, Koji; Noiri, Eisei; Nakamura, Eiichi

    2014-05-01

    The efficient treatment of lung diseases requires lung-selective delivery of agents to the lung. However, lung-selective delivery is difficult because the accumulation of micrometer-sized carriers in the lung often induces inflammation and embolization-related toxicity. Here we demonstrate a lung-selective delivery system of small interfering RNA (siRNA) by controlling the size of carrier vehicle in blood vessels. The carrier is made of tetra(piperazino)fullerene epoxide (TPFE), a water-soluble cationic tetraamino fullerene. TPFE and siRNA form sub-micrometer-sized complexes in buffered solution and these complexes agglutinate further with plasma proteins in the bloodstream to form micrometer-sized particles. The agglutinate rapidly clogs the lung capillaries, releases the siRNA into lung cells to silence expression of target genes, and is then cleared rapidly from the lung after siRNA delivery. We applied our delivery system to an animal model of sepsis, indicating the potential of TPFE-based siRNA delivery for clinical applications.

  15. Time Stretching of the GeV Emission of GRBs: Fermi-LAT Data versus Geometrical Model

    NASA Astrophysics Data System (ADS)

    Piskunov, Maxim S.; Rubtsov, Grigory I.

    2016-06-01

    It is known that the high-energy (\\gt 100 {MeV}) emission of gamma-ray bursts is delayed with respect to the low-energy emission. However, the dependence of light curves on energy has not been studied for the high-energy bands. In this paper, we consider the bursts observed by Fermi LAT from 2008 August 4 to 2011 August 1, for which at least 10 photons were observed with energy greater than 1 {GeV}. These include four bursts: GRB 080916C, GRB 090510, GRB 090902B, and GRB 090926A. We use the Kolmogorov-Smirnov test to compare the light curves in the two bands 100 {MeV}\\lt E\\lt 1 {GeV} and E\\gt 1 {GeV}. For GRB 080916C and GRB 090510 the light curves in the two bands are statistically compatible. However, for GRB 090926A, the higher-energy light curve is stretched compared to the lower-energy one with a statistical significance of 3.3σ and, for GRB 090902B, on the contrary, the lower-energy curve is stretched with 2.3σ significance. We argue that the observed diversity of stretching factors may be explained using a simple geometrical model. The model assumes that the jet opening angle depends on the emission energy in a way that the most energetic photons are radiated near the axis of the jet. All of the bursts are considered equivalent in their rest frames, and the observed light curves differ only due to different redshifts and view directions. The model conforms to the total burst energy constraint and matches the Fermi-LAT observations of the fraction of GRBs visible in the 100 {MeV}\\lt E\\lt 1 {GeV} band, which may be observed at higher energies. The model predicts the distribution of observable stretching factors, which may be tested in future data. Finally, we propose a method to estimate the observer's off-axis angle based on the stretching factor and the fraction of the high-energy photons. The code for modeling is open source and is publicly available on GitHub (https://github.com/maxitg/GammaRays).

  16. Topical lidocaine adrenaline tetracaine (LAT gel) versus injectable buffered lidocaine for local anesthesia in laceration repair.

    PubMed Central

    Ernst, A A; Marvez-Valls, E; Nick, T G; Mills, T; Minvielle, L; Houry, D

    1997-01-01

    The objective of the study was to compare topical lidocaine adrenaline tetracaine (LAT gel) with injectable buffered lidocaine with epinephrine regarding pain of application or injection and anesthesia effectiveness. The study was a randomized prospective comparison trial in an urban emergency department. Physicians and patients ranked the pain of application, injection, and suturing according to a 10-cm visual analog scale. Sixty-six patients were entered, 33 in the LAT gel group and 33 in the injectable buffered lidocaine group. Injection was found to be significantly more painful than application of gel (P < 0.001). For anesthesia effectiveness, there was no difference according to patients (P = 0.48) or physicians (P = 0.83) for topical vs injectable forms. The number of sutures causing pain was not statistically different in the two groups (P = 0.28). In conclusion, LAT gel compared favorably with injectable buffered lidocaine for local anesthesia effectiveness and was significantly less painful to apply. It may be the preferred local anesthetic for this reason. PMID:9291744

  17. Afterglow Population Studies from Swift Follow-Up Observations of Fermi LAT GRBs

    NASA Technical Reports Server (NTRS)

    Racusin, Judith L.; Oates, S. R.; McEnery, J.; Vasileiou, V.; Troja, E.; Gehrels, N.

    2010-01-01

    The small population of Fermi LAT detected GRBs discovered over the last year has been providing interesting and unexpected clues into GRB prompt and afterglow emission mechanisms. Over the last 5 years, it has been Swift that has provided the robust data set of UV/optical and X-ray afterglow observations that opened many windows into other components of GRB emission structure. We explore the new ability to utilize both of these observatories to study the same GRBs over 10 orders of magnitude in energy, although not always concurrently. Almost all LAT GRBs that have been followed-up by Swift within 1-day have been clearly detected and carefully observed. We will present the context of the lower-energy afterglows of this special subset of GRBs that has > 100 MeV emission compared to the hundreds in the Swift database that may or may not have been observed by LAT, and theorize upon the relationship between these properties and the origin of the high energy gamma-ray emission.

  18. Time delays between Fermi-LAT and GBM light curves of gamma-ray bursts

    NASA Astrophysics Data System (ADS)

    Castignani, G.; Guetta, D.; Pian, E.; Amati, L.; Puccetti, S.; Dichiara, S.

    2014-05-01

    Aims: Most gamma-ray bursts (GRBs) detected by the Fermi Gamma-ray Space Telescope exhibit a delay of up to about 10 seconds between the trigger time of the hard X-ray signal as measured by the Fermi Gamma-ray Burst Monitor (GBM) and the onset of the MeV-GeV counterpart detected by the Fermi Large Area Telescope (LAT). This delay may hint at important physics, whether it is due to the intrinsic variability of the inner engine or related to quantum dispersion effects in the velocity of light propagation from the sources to the observer. Therefore, it is critical to have a proper assessment of how these time delays affect the overall properties of the light curves. Methods: We cross-correlated the 5 brightest GRBs of the 1st Fermi-LAT Catalog by means of the continuous correlation function (CCF) and of the discrete correlation function (DCF). The former is suppressed because of the low number counts in the LAT light curves. A maximum in the DCF suggests there is a time lag between the curves, whose value and uncertainty are estimated through a Gaussian fitting of the DCF profile and light curve simulation via a Monte Carlo approach. Results: The cross-correlation of the observed LAT and GBM light curves yields time lags that are mostly similar to those reported in the literature, but they are formally consistent with zero. The cross-correlation of the simulated light curves yields smaller errors on the time lags and more than one time lag for GRBs 090902B and 090926A. For all 5 GRBs, the time lags are significantly different from zero and consistent with those reported in the literature, when only the secondary maxima are considered for those two GRBs. Conclusions: The DCF method proves the presence of (possibly multiple) time lags between the LAT and GBM light curves in a given GRB and underlines the complexity of their time behavior. While this suggests that the delays should be ascribed to intrinsic physical mechanisms, more sensitivity and more statistics are

  19. Cap and trade schemes on waste management: A case study of the Landfill Allowance Trading Scheme (LATS) in England

    SciTech Connect

    Calaf-Forn, Maria; Roca, Jordi; Puig-Ventosa, Ignasi

    2014-05-01

    Highlights: • LATS has been effective to achieve a reduction of the amount of landfilled waste. • LATS has been one of the few environmental instruments for waste management with a cap and trade methodology. • LATS has achieved to increase recycling of the biodegradable and other waste fractions. - Abstract: The Landfill Allowance Trading Scheme (LATS) is one of the main instruments used in England to enforce the landfill diversion targets established in the Directive 1999/31/EC of the European Parliament and of the Council of 26 April 1999 on the landfill of waste (Landfill Directive). Through the LATS, biodegradable municipal waste (BMW) allowances for landfilling are allocated to each local authority, otherwise known as waste disposal authorities (WDAs). The quantity of landfill allowances received is expected to decrease continuously from 2005/06 to 2019/20 so as to meet the objectives of the Landfill Directive. To achieve their commitments, WDAs can exchange, buy, sell or transfer allowances among each other, or may re-profile their own allocation through banking and/or borrowing. Despite the goals for the first seven years – which included two target years (2005/06 and 2009/10) – being widely achieved (the average allocation of allowances per WDA was 22.9% higher than those finally used), market activity among WDAs was high and prices were not very stable. Results in terms of waste reduction and recycling levels have been satisfactory. The reduction of BMW landfilled (in percentage) was higher during the first seven years of the LATS period (2005/06–2011/12) (around 7% annually) than during the previous period (2001/02–2004/05) (4.2% annually). Since 2008, the significance of the LATS diminished because of an increase in the rate of the UK Landfill Tax. The LATS was suppressed after the 2012/13 target year, before what it was initially scheduled. The purpose of this paper is to describe the particularities of the LATS, analyse its performance as

  20. HIGH-FREQUENCY RADIO PROPERTIES OF SOURCES IN THE FERMI-LAT 1 YEAR POINT SOURCE CATALOG

    SciTech Connect

    Mahony, Elizabeth K.; Sadler, Elaine M.; Murphy, Tara; Ekers, Ronald D.; Edwards, Philip G.; Massardi, Marcella

    2010-08-01

    The high-frequency radio sky, like the gamma-ray sky surveyed by the Fermi satellite, is dominated by flat spectrum radio quasars and BL Lac objects at bright flux levels. To investigate the relationship between radio and gamma-ray emission in extragalactic sources, we have cross-matched the Australia Telescope 20 GHz survey catalog (AT20G) with the Fermi-LAT 1 year Point Source Catalog (1FGL). The 6.0 sr of sky covered by both catalogs ({delta} < 0{sup 0}, |b|>1.{sup 0}5) contains 5890 AT20G radio sources and 604 1FGL gamma-ray sources. The AT20G source positions are accurate to within {approx}1 arcsec and, after excluding known Galactic sources, 43% of Fermi 1FGL sources have an AT20G source within the 95% Fermi confidence ellipse. Monte Carlo tests imply that at least 95% of these matches are genuine associations. Only five gamma-ray sources (1% of the Fermi catalog) have more than one AT20G counterpart in the Fermi error box. The AT20G matches also generally support the active galactic nucleus (AGN) associations in the First LAT AGN Catalog. We find a trend of increasing gamma-ray flux density with 20 GHz radio flux density. The Fermi detection rate of AT20G sources is close to 100% for the brightest 20 GHz sources, decreasing to 20% at 1 Jy, and to roughly 1% at 100 mJy. Eight of the matched AT20G sources have no association listed in 1FGL and are presented here as potential gamma-ray AGNs for the first time. We also identify an alternative AGN counterpart to one 1FGL source. The percentage of Fermi sources with AT20G detections decreases toward the Galactic plane, suggesting that the 1FGL catalog contains at least 50 Galactic gamma-ray sources in the southern hemisphere that are yet to be identified.

  1. Cap and trade schemes on waste management: a case study of the landfill allowance trading scheme (LATS) in England.

    PubMed

    Calaf-Forn, Maria; Roca, Jordi; Puig-Ventosa, Ignasi

    2014-05-01

    The Landfill Allowance Trading Scheme (LATS) is one of the main instruments used in England to enforce the landfill diversion targets established in the Directive 1999/31/EC of the European Parliament and of the Council of 26 April 1999 on the landfill of waste (Landfill Directive). Through the LATS, biodegradable municipal waste (BMW) allowances for landfilling are allocated to each local authority, otherwise known as waste disposal authorities (WDAs). The quantity of landfill allowances received is expected to decrease continuously from 2005/06 to 2019/20 so as to meet the objectives of the Landfill Directive. To achieve their commitments, WDAs can exchange, buy, sell or transfer allowances among each other, or may re-profile their own allocation through banking and/or borrowing. Despite the goals for the first seven years - which included two target years (2005/06 and 2009/10) - being widely achieved (the average allocation of allowances per WDA was 22.9% higher than those finally used), market activity among WDAs was high and prices were not very stable. Results in terms of waste reduction and recycling levels have been satisfactory. The reduction of BMW landfilled (in percentage) was higher during the first seven years of the LATS period (2005/06-2011/12) (around 7% annually) than during the previous period (2001/02-2004/05) (4.2% annually). Since 2008, the significance of the LATS diminished because of an increase in the rate of the UK Landfill Tax. The LATS was suppressed after the 2012/13 target year, before what it was initially scheduled. The purpose of this paper is to describe the particularities of the LATS, analyse its performance as a waste management policy, make a comparison with the Landfill Tax, discuss its main features as regards efficiency, effectiveness and the application of the "polluter pays" principle and finally discuss if the effect of the increase in the Landfill Tax is what made the LATS ultimately unnecessary.

  2. Mapping the Zap-70 phosphorylation sites on LAT (linker for activation of T cells) required for recruitment and activation of signalling proteins in T cells.

    PubMed Central

    Paz, P E; Wang, S; Clarke, H; Lu, X; Stokoe, D; Abo, A

    2001-01-01

    T-cell-receptor (TCR)-mediated LAT (linker for activation of T cells) phosphorylation is critical for the membrane recruitment of signalling complexes required for T-cell activation. Although tyrosine phosphorylation of LAT is required for recruitment and activation of signalling proteins, the molecular mechanism associated with this event is unclear. In the present study we reconstituted the LAT signalling pathway by demonstrating that a direct tyrosine phosphorylation of LAT with activated protein-tyrosine kinase Zap70 is necessary and sufficient for the association and activation of signalling proteins. Zap-70 efficiently phosphorylates LAT on tyrosine residues at positions 226, 191, 171, 132 and 127. By substituting these tyrosine residues in LAT with phenylalanine and by utilizing phosphorylated peptides derived from these sites, we mapped the tyrosine residues in LAT required for the direct interaction and activation of Vav, p85/p110alpha and phospholipase Cgamma1 (PLCgamma1). Our results indicate that Tyr(226) and Tyr(191) are required for Vav binding, whereas Tyr(171) and Tyr(132) are necessary for association and activation of phosphoinositide 3-kinase activity and PLCgamma1 respectively. Furthermore, by expression of LAT mutants in LAT-deficient T cells, we demonstrate that Tyr(191) and Tyr(171) are required for T-cell activation and Tyr(132) is required for the activation of PLCgamma1 and Ras signalling pathways. PMID:11368773

  3. From FERMI-LAT observations to the blind pulsar survey SPAN512 with the Nançay Radio Telescope

    NASA Astrophysics Data System (ADS)

    Octau, F.; Desvignes, G.; Cognard, I.; Champion, D.; Lazarus, P.; Smith, D.; Theureau, G.

    2016-12-01

    Since the discovery of the first pulsar in 1967, we know over 2500 pulsars today. Pulsars offer a broad range of studies: from the study of the properties of interstellar medium and of pulsar magnetospheres up to test of gravity in the strong-field regime and the characterisation of the cosmological Gravitation Wave Background. This explains why we keep searching for pulsars nowadays. Such focus was initiated at the Nançay Radio Telescope (NRT) with the observation of unidentified Fermi-LAT sources, which led to the quick discovery of three new millisecond pulsars. In 2012, a blind pulsar survey called SPAN512 (in reference to the large bandwidth of 512 MHz) was initiated and the NRT began to observe the low galactic latitude sky at 1.4 GHz. This survey is still in progress (≈90% of the observations have been made) and, up to now, it has led to the discovery of three pulsars, two of them with millisecond spin periods.

  4. Tectonic significance of magnetic and gravity data across northern California (lat. 39[degree]N. to lat. 41[degree]N. )

    SciTech Connect

    Griscom, A.; Roberts, C.W.; Halvorson, P.F. )

    1993-04-01

    Aeromagnetic and isostatic residual gravity maps of an east-west transect across northern California show important tectonic features. A linear magnetic anomaly and west-sloping gradient extends over 300 km along the Franciscan-Great Valley contact (FGC) and across the Klamath Mountains province (KM) north to lat. 40[degree]45'N. The anomaly source lies at depths of 5--10 km beneath the KM and the FGC, and implies that the Franciscan complex of the Coast Ranges is thrust (and wedged) at least 80 km eastward beneath the KM to approximately long. 122[degree]40 minutes W. Calculations on a circular gravity low of [minus]50 mGal centered at the circular Bald Rock pluton (diameter about 15 km) in the Sierran foothills indicate a pluton thickness of about 15 km. The nearby Cascade and Merrimac plutons are located on the gradients of this gravity anomaly, have a relatively minor effect on it, and thus are interpreted to be thick (up to 5 km) laccolithic sills that emanate from the Bald Rock pluton, thinning away from it to a feather edge. Model studies indicate that the northeast contact of the Feather River periodotite body (FRPB) north of lat. 39[degree]40 minutes N. generally dips steeply northeast or vertical. The same contact south of this latitude dips east at angles of about 45[degree] to depths of at least 10 km. Magnetic patterns extending from the northern Sierra across the Cascades to the Klamath Mountains suggest that the FRPB may correlate with the Trinity ophiolite.

  5. K/Ar dating of lunar soils. IV - Orange glass from 74220 and agglutinates from 14259 and 14163

    NASA Technical Reports Server (NTRS)

    Alexander, E. C., Jr.; Coscio, M. R., Jr.; Dragon, J. C.; Saito, K.

    1980-01-01

    Total fusion Ar-40 - A-39 analyses of orange glass from lunar soil 74220 combined with the sums of earlier stepwise heating data by other workers have yielded a precise K/Ar isochron with a slope corresponding to an age of 3.66 + or - 0.03 G.y. for the orange glass. The result is in marginal agreement with Huneke's (1978) age of 3.60 + or - 0.04 G.y. for 74220 glass. The Ar systematics in the agglutinates from 14259 and 14163 are dominated by volume correlated argon. Step-wise heating analyses yield data which define experimentally reproducible linear arrays in Ar-40/Ar-36 vs. K-40/Ar-36 diagrams. The slopes of these arrays correspond formally to very old ages, but it is not clear, however, that such ages have any physical significance.

  6. TP53, MSH4, and LATS1 germline mutations in a family with clustering of nervous system tumors.

    PubMed

    Kim, Young-Ho; Ohta, Takashi; Oh, Ji Eun; Le Calvez-Kelm, Florence; McKay, James; Voegele, Catherine; Durand, Geoffroy; Mittelbronn, Michel; Kleihues, Paul; Paulus, Werner; Ohgaki, Hiroko

    2014-09-01

    Exome DNA sequencing of blood samples from a Li-Fraumeni family with a TP53 germline mutation (codon 236 deletion) and multiple nervous system tumors revealed additional germline mutations. Missense mutations in the MSH4 DNA repair gene (c.2480T>A; p.I827N) were detected in three patients with gliomas (two anaplastic astrocytomas, two glioblastomas). Two family members without a TP53 germline mutation who developed peripheral schwannomas also carried the MSH4 germline mutation, and in addition, a germline mutation of the LATS1 gene (c.286C>T; p.R96W). LATS1 is a downstream mediator of the NF2, but has not previously been found to be related to schwannomas. We therefore screened the entire coding sequence of the LATS1 gene in 65 sporadic schwannomas, 12 neurofibroma/schwannoma hybrid tumors, and 4 cases of schwannomatosis. We only found a single base deletion at codon 827 (exon 5) in a spinal schwannoma, leading to a stop at codon 835 (c.2480delG; p.*R827Kfs*8). Mutational loss of LATS1 function may thus play a role in some inherited schwannomas, but only exceptionally in sporadic schwannomas. This is the first study reporting a germline MSH4 mutation. Since it was present in all patients, it may have contributed to the subsequent acquisition of TP53 and LATS1 germline mutations.

  7. Fermi-LAT observations of supernova remnants Kesteven 79

    SciTech Connect

    Auchettl, Katie; Slane, Patrick; Castro, Daniel

    2014-03-01

    In this paper, we report on the detection of γ-ray emission coincident with the Galactic supernova remnant (SNR) Kesteven 79 (Kes 79). We analyzed approximately 52 months of data obtained with the Large Area Telescope on board the Fermi Gamma-ray Space Telescope. Kes 79 is thought to be interacting with adjacent molecular clouds, based on the presence of strong {sup 12}CO J = 1 → 0 and HCO{sup +} J = 1 → 0 emission and the detection of 1720 MHz line emission toward the east of the remnant. Acceleration of cosmic rays is expected to occur at SNR shocks, and SNRs interacting with dense molecular clouds provide a good testing ground for detecting and analyzing the production of γ-rays from the decay of π{sup 0} into two γ-ray photons. This analysis investigates γ-ray emission coincident with Kes 79, which has a detection significance of ∼7σ. Additionally, we present an investigation of the spatial and spectral characteristics of Kes 79 using multiple archival XMM-Newton observations of this remnant. We determine the global X-ray properties of Kes 79 and estimate the ambient density across the remnant. We also performed a similar analysis for Galactic SNR Kesteven 78 (Kes 78), but due to large uncertainties in the γ-ray background model, no conclusion can be made about an excess of GeV γ-ray associated with the remnant.

  8. Gamma-telescopes Fermi/LAT and GAMMA-400 Trigger Systems Event Recognizing Methods Comparison

    NASA Astrophysics Data System (ADS)

    Arkhangelskaja, I. V.; Murchenko, A. E.; Chasovikov, E. N.; Arkhangelskiy, A. I.; Kheymits, M. D.

    Usually instruments for high-energy γ-quanta registration consists of converter (where γ-quanta produced pairs) and calorimeter for particles energy measurements surrounded by anticoincidence shield used to events identification (whether incident particle was charged or neutral). The influence of pair formation by γ-quanta in shield and the backsplash (moved in the opposite direction particles created due high energy γ-rays interact with calorimeter) should be taken into account. It leads to decrease both effective area and registration efficiency at E>10 GeV. In the presented article the event recognizing methods used in Fermi/LAT trigger system is considered in comparison with the ones applied in counting and triggers signals formation system of gamma-telescope GAMMA-400. The GAMMA-400 (Gamma Astronomical Multifunctional Modular Apparatus) will be the new high-apogee space γ-observatory. The GAMMA-400 consist of converter-tracker based on silicon-strip coordinate detectors interleaved with tungsten foils, imaging calorimeter make of 2 layers of double (x, y) silicon strip coordinate detectors interleaved with planes of CsI(Tl) crystals and the electromagnetic calorimeter CC2 consists only of CsI(Tl) crystals. Several plastics detections systems used as anticoincidence shield, for particles energy and moving direction estimations. The main differences of GAMMA-400 constructions from Fermi/LAT one are using the time-of-flight system with base of 50 cm and double layer structure of plastic detectors provides more effective particles direction definition and backsplash rejection. Also two calorimeters in GAMMA-400 composed the total absorbtion spectrometer with total thickness ∼ 25 X0 or ∼1.2 λ0 for vertical incident particles registration and 54 X0 or 2.5 λ0 for laterally incident ones (where λ0 is nuclear interaction length). It provides energy resolution 1-2% for 10 GeV-3.0×103 GeV events while the Fermi/LAT energy resolution does not reach such a

  9. Fermi-LAT Observations of High-energy Behind-the-limb Solar Flares

    NASA Astrophysics Data System (ADS)

    Ackermann, M.; Allafort, A.; Baldini, L.; Barbiellini, G.; Bastieri, D.; Bellazzini, R.; Bissaldi, E.; Bonino, R.; Bottacini, E.; Bregeon, J.; Bruel, P.; Buehler, R.; Cameron, R. A.; Caragiulo, M.; Caraveo, P. A.; Cavazzuti, E.; Cecchi, C.; Charles, E.; Ciprini, S.; Costanza, F.; Cutini, S.; D’Ammando, F.; de Palma, F.; Desiante, R.; Digel, S. W.; Di Lalla, N.; Di Mauro, M.; Di Venere, L.; Drell, P. S.; Favuzzi, C.; Fukazawa, Y.; Fusco, P.; Gargano, F.; Giglietto, N.; Giordano, F.; Giroletti, M.; Grenier, I. A.; Guillemot, L.; Guiriec, S.; Jogler, T.; Jóhannesson, G.; Kashapova, L.; Krucker, S.; Kuss, M.; La Mura, G.; Larsson, S.; Latronico, L.; Li, J.; Liu, W.; Longo, F.; Loparco, F.; Lubrano, P.; Magill, J. D.; Maldera, S.; Manfreda, A.; Mazziotta, M. N.; Mitthumsiri, W.; Mizuno, T.; Monzani, M. E.; Morselli, A.; Moskalenko, I. V.; Negro, M.; Nuss, E.; Ohsugi, T.; Omodei, N.; Orlando, E.; Pal’shin, V.; Paneque, D.; Perkins, J. S.; Pesce-Rollins, M.; Petrosian, V.; Piron, F.; Principe, G.; Rainò, S.; Rando, R.; Razzano, M.; Reimer, O.; Rubio da Costa, F.; Sgrò, C.; Simone, D.; Siskind, E. J.; Spada, F.; Spandre, G.; Spinelli, P.; Tajima, H.; Thayer, J. B.; Torres, D. F.; Troja, E.; Vianello, G.

    2017-02-01

    We report on the Fermi-LAT detection of high-energy emission from the behind-the-limb (BTL) solar flares that occurred on 2013 October 11, and 2014 January 6 and September 1. The Fermi-LAT observations are associated with flares from active regions originating behind both the eastern and western limbs, as determined by STEREO. All three flares are associated with very fast coronal mass ejections (CMEs) and strong solar energetic particle events. We present updated localizations of the >100 MeV photon emission, hard X-ray (HXR) and EUV images, and broadband spectra from 10 keV to 10 GeV, as well as microwave spectra. We also provide a comparison of the BTL flares detected by Fermi-LAT with three on-disk flares and present a study of some of the significant quantities of these flares as an attempt to better understand the acceleration mechanisms at work during these occulted flares. We interpret the HXR emission to be due to electron bremsstrahlung from a coronal thin-target loop top with the accelerated electron spectra steepening at semirelativistic energies. The >100 MeV gamma-rays are best described by a pion-decay model resulting from the interaction of protons (and other ions) in a thick-target photospheric source. The protons are believed to have been accelerated (to energies >10 GeV) in the CME environment and precipitate down to the photosphere from the downstream side of the CME shock and landed on the front side of the Sun, away from the original flare site and the HXR emission.

  10. Involvement of the L-Type Amino Acid Transporter Lat2 in the Transport of 3,3′-Diiodothyronine across the Plasma Membrane

    PubMed Central

    Kinne, Anita; Wittner, Melanie; Wirth, Eva K.; Hinz, Katrin M.; Schülein, Ralf; Köhrle, Josef; Krause, Gerd

    2015-01-01

    Thyroid hormones are transported across cell membranes by transmembrane transporter proteins, for example by members of the monocarboxylate transporter (MCT) and the L-type amino acid transporter (LAT) families. LATs consist of a light chain (e.g. LAT2) and a heavy chain (CD98), which is essential for their cell surface expression and functionality. The specificity of Lat2 for thyroid hormones and their metabolites and its role in their transport was not fully clear. This fact motivated us to establish a cell system to elucidate the uptake of thyroid hormones and their metabolites by mouse Lat2. The coinjection of cRNA coding for Lat2 and CD98 into Xenopus laevis oocytes resulted in a markedly increased level of 3,3′-diiodo-L-thyronine (3,3′-T2) and to some extent also enhanced T3 transport. To gain insight into properties of thyroid hormones and their metabolites transported by Lat2, we inhibited 3,3′-T2 uptake by various iodothyronine derivatives. T1 and T2 derivatives as well as 2-aminobicyclo-[2, 2,1]-heptane-2-carboxylic acid strongly competed with 3,3′-T2 uptake. In addition, we performed T2 uptake measurements with the thyroid hormone-specific transporter MCT8. For both Lat2 and MCT8, Km values in a low micromolar range were calculated. We demonstrated that oocytes are a suitable system for thyroid hormone transport studies mediated by Lat2. Our data indicates that Lat2 compared to other thyroid hormone transporters prefers 3,3′-T2 as the substrate. Thus, Lat2 might contribute to the availability of thyroid hormone by importing and/or exporting 3,3′-T2, which is generated either by T3 inactivation or by rapid deiodinase 1-mediated rT3 degradation. PMID:26601072

  11. The role of LAT in increased CD8+ T cell exhaustion in trigeminal ganglia of mice latently infected with herpes simplex virus 1.

    PubMed

    Allen, Sariah J; Hamrah, Pedram; Gate, David; Mott, Kevin R; Mantopoulos, Dimosthenis; Zheng, Lixin; Town, Terrence; Jones, Clinton; von Andrian, Ulrich H; Freeman, Gordon J; Sharpe, Arlene H; BenMohamed, Lbachir; Ahmed, Rafi; Wechsler, Steven L; Ghiasi, Homayon

    2011-05-01

    Herpes simplex virus (HSV) infection is a classic example of latent viral infection in humans and experimental animal models. The HSV-1 latency-associated transcript (LAT) plays a major role in the HSV-1 latency reactivation cycle and thus in recurrent disease. Whether the presence of LAT leads to generation of dysfunctional T cell responses in the trigeminal ganglia (TG) of latently infected mice is not known. To address this issue, we used LAT-positive [LAT(+)] and LAT-deficient [LAT(-)] viruses to evaluate the effect of LAT on CD8 T cell exhaustion in TG of latently infected mice. The amount of latency as determined by quantitative reverse transcription-PCR (qRT-PCR) of viral DNA in total TG extracts was 3-fold higher with LAT(+) than with LAT(-) virus. LAT expression and increased latency correlated with increased mRNA levels of CD8, PD-1, and Tim-3. PD-1 is both a marker for exhaustion and a primary factor leading to exhaustion, and Tim-3 can also contribute to exhaustion. These results suggested that LAT(+) TG contain both more CD8(+) T cells and more CD8(+) T cells expressing the exhaustion markers PD-1 and Tim-3. This was confirmed by flow cytometry analyses of expression of CD3/CD8/PD-1/Tim-3, HSV-1, CD8(+) T cell pentamer (specific for a peptide derived from residues 498 to 505 of glycoprotein B [gB(498-505)]), interleukin-2 (IL-2), and tumor necrosis factor alpha (TNF-α). The functional significance of PD-1 and its ligands in HSV-1 latency was demonstrated by the significantly reduced amount of HSV-1 latency in PD-1- and PD-L1-deficient mice. Together, these results may suggest that both PD-1 and Tim-3 are mediators of CD8(+) T cell exhaustion and latency in HSV-1 infection.

  12. Immunoreactions involving platelets. III. Quantitative aspects of platelet agglutination, inhibition of clot retraction, and other reactions caused by the antibody of quinidine purpura.

    PubMed

    SHULMAN, N R

    1958-05-01

    Quantitative aspects of platelet agglutination and inhibition of clot retraction by the antibody of quinidine purpura were described. The reactions appeared to depend on formation of types of antibody-quinidine-platelet complexes which could fix complement but complement was not necessary for these reactions. Complement fixation was at least 10 times more sensitive than platelet agglutination or inhibition of clot retraction for measurement and detection of antibody activity. Although it has been considered that antibodies of drug purpura act as platelet lysins in the presence of complement and that direct lysis of platelets accounts for development of thrombocytopenia in drug purpura, the present study suggests that attachment of antibody produces a change in platelets which is manifested in vitro only by increased susceptibility to non-specific factors which can alter the stability of platelets in the absence of antibody. The attachment of antibody to platelets in vivo may only indirectly affect platelet survival. In contrast to human platelets, dog, rabbit, and guinea pig platelets, and normal or trypsin-treated human red cells did not agglutinate, fix complement, or adsorb antibody; and intact human endothelial cells did not fix complement or adsorb antibody. Rhesus monkey platelets were not agglutinated by the antibody but did adsorb antibody and fix complement although their activity in these reactions differed quantitatively from that of human platelets. Cinchonine could be substituted for quinidine in agglutination and inhibition of clot retraction reactions but quinine and cinchonidine could not. Attempts to cause passive anaphylaxis in guinea pigs with the antibody of quinidine purpura were not successful.

  13. Fermi LAT Detection of a Rapid, Powerful Gamma-ray Flare of the FSRQ CTA 102

    NASA Astrophysics Data System (ADS)

    Carpenter, Bryce; Ojha, Roopesh

    2015-12-01

    The Large Area Telescope (LAT) on board the Fermi Gamma-ray Space Telescope has observed increasing gamma-ray flux from a source positionally consistent with the flat spectrum radio quasar CTA 102 (also known as 3FGL J2232.5+1143, Acero et al. 2015, ApJS, 218, 23) with radio coordinates R.A.: 338.1517038 deg, Dec: 11.7308067 deg (J2000, Johnston et al. 1995, AJ, 110, 880) at redshift z=1.037 (Schmidt 1965, ApJ, 141, 1295).

  14. Fermi LAT detection of renewed activity from the blazar PKS 1502+106

    NASA Astrophysics Data System (ADS)

    Ciprini, Stefano

    2015-06-01

    The Large Area Telescope (LAT), one of two instruments on the Fermi Gamma-ray Space Telescope, has observed increasing gamma-ray flux from a source positionally consistent with the flat spectrum radio quasar PKS 1502+106 (also known as OR 103, S3 1502+10 and 3FGL J1504.4+1029, Acero et al., arXiv:1501.02003), with radio coordinates, (J2000.0), R.A.: 226.10408 deg, Dec: 10.49422 deg (Johnston et al. 1995, AJ, 110, 880). This blazar has a redshift of z=1.8383 (Hewett & Wild 2010, MNRAS, 405, 2302).

  15. Fermi LAT detection of a GeV flare from the FSRQ 3C 279

    NASA Astrophysics Data System (ADS)

    Buson, S.

    2013-12-01

    The Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, has observed an increasing gamma-ray flux from a source positionally consistent with the blazar 3C279 (RA: 194.0465271, Dec: -5.7893119 , Johnston et al.1995, AJ, 110, 880, J2000). This source is classified as a flat spectrum radio quasar (FSRQ) at redshift of 0.536 (Marziani et al. ApJS, 1996, 104, 37) and is one of the three FSRQs known to be VHE gamma-ray emitters.

  16. Fermi-LAT detection of strong flaring activity from the FSRQ CTA 102

    NASA Astrophysics Data System (ADS)

    Becerra, J.; Carpenter, Bryce; Cutini, Sara

    2016-02-01

    The Large Area Telescope (LAT) on board the Fermi Gamma-ray Space Telescope has observed increasing gamma-ray activity from a source positionally consistent with the flat spectrum radio quasar CTA 102 (also known as 3FGL J2232.5+1143, Acero et al. 2015, ApJS, 218, 23) with radio coordinates R.A.: 338.1517038 deg, Dec: 11.7308067 deg (J2000, Johnston et al. 1995, AJ, 110, 880) at redshift z=1.037 (Schmidt 1965, ApJ, 141, 1295).

  17. VizieR Online Data Catalog: The first Fermi LAT SNR catalog (1SC) (Acero+, 2016)

    NASA Astrophysics Data System (ADS)

    Acero, F.; Ackermann, M.; Ajello, M.; Baldini, L.; Ballet, J.; Barbiellini, G.; Bastieri, D.; Bellazzini, R.; Bissaldi, E.; Blandford, R. D.; Bloom, E. D.; Bonino, R.; Bottacini, E.; Brandt, T. J.; Bregeon, J.; Bruel, P.; Buehler, R.; Buson, S.; Caliandro, G. A.; Cameron, R. A.; Caputo, R.; Caragiulo, M.; Caraveo, P. A.; Casandjian, J. M.; Cavazzuti, E.; Cecchi, C.; Chekhtman, A.; Chiang, J.; Chiaro, G.; Ciprini, S.; Claus, R.; Cohen, J. M.; Cohen-Tanugi, J.; Cominsky, L. R.; Condon, B.; Conrad, J.; Cutini, S.; D'Ammando, F.; de Angelis, A.; de Palma, F.; Desiante, R.; Digel, S. W.; di Venere, L.; Drell, P. S.; Drlica-Wagner, A.; Favuzzi, C.; Ferrara, E. C.; Franckowiak, A.; Fukazawa, Y.; Funk, S.; Fusco, P.; Gargano, F.; Gasparrini, D.; Giglietto, N.; Giommi, P.; Giordano, F.; Giroletti, M.; Glanzman, T.; Godfrey, G.; Gomez-Vargas, G. A.; Grenier, I. A.; Grondin, M.-H.; Guillemot, L.; Guiriec, S.; Gustafsson, M.; Hadasch, D.; Harding, A. K.; Hayashida, M.; Hays, E.; Hewitt, J. W.; Hill, A. B.; Horan, D.; Hou, X.; Iafrate, G.; Jogler, T.; Johannesson, G.; Johnson, A. S.; Ka, Mae T.; Katagiri, H.; Kataoka, J.; Katsuta, J.; Kerr, M.; Knodlseder, J.; Kocevski, D.; Kuss, M.; Laffon, H.; Lande, J.; Larsson, S.; Latronico, L.; Lemoine-Goumard, M.; Li, J.; Li, L.; Longo, F.; Loparco, F.; Lovellette, M. N.; Lubrano, P.; Magill, J.; Maldera, S.; Marelli, M.; Mayer, M.; Mazziotta, M. N.; Michelson, P. F.; Mitthumsiri, W.; Mizuno, T.; Moiseev, A. A.; Monzani, M. E.; Moretti, E.; Morselli, A.; Moskalenko, I. V.; Murgia, S.; Nemmen, R.; Nuss, E.; Ohsugi, T.; Omodei, N.; Orienti, M.; Orlando, E.; Ormes, J. F.; Paneque, D.; Perkins, J. S.; Pesce-Rollins, M.; Petrosian, V.; Piron, F.; Pivato, G.; Porter, T. A.; Raino, S.; Rando, R.; Razzano, M.; Razzaque, S.; Reimer, A.; Reimer, O.; Renaud, M.; Reposeur, T.; Rousseau, R.; Saz Parkinson, P. M.; Schmid, J.; Schulz, A.; Sgro, C.; Siskind, E. J.; Spada, F.; Spandre, G.; Spinelli, P.; Strong, A. W.; Suson, D. J.; Tajima, H.; Takahashi, H.; Tanaka, T.; Thayer, J. B.; Thompson, D. J.; Tibaldo, L.; Tibolla, O.; Torres, D. F.; Tosti, G.; Troja, E.; Uchiyama, Y.; Vianello, G.; Wells, B.; Wood, K. S.; Wood, M.; Yassine, M.; Den Hartog P. R.; Zimmer, S.

    2016-06-01

    We have systematically characterized the Fermi/LAT 1-100GeV emission from 36 months (from 2008 August 4 to 2011 August 4) in 279 regions containing known radio SNRs, identifying sources emitting in the regions and then determining the likelihood that the source nearest the SNR is associated with it. We found 102 candidates, 30 of which have sufficient spatial overlap and significance with the alternative IEMs to suggest they are the GeV counterparts to their corresponding radio SNRs and an additional 14 candidates which may also be related to the SNRs. (3 data files).

  18. The radio and optical counterpart of the new Fermi LAT flaring source J0109+6134

    NASA Astrophysics Data System (ADS)

    Paredes, J. M.; Martí, J.; Peracaula, M.

    2010-02-01

    Following the recent ATELs #2414, #2416 and #2420 concerning the Fermi-LAT, AGILE and Swift/XRT consistent detections of the new gamma-ray flaring source J0109+6134, we wish to remind that the proposed radio counterpart (VCS2 J0109+6133/GT 0106+613) was extensively observed nearly two decades ago by different authors in the context of the GT catalogue of Galactic Plane radio sources (Taylor and Gregory 1983, AJ, 88, 1784; Gregory and Taylor 1986, AJ 92, 371).

  19. Fermi LAT detection of renewed gamma-ray activity from the FSRQ PKS 2326-502

    NASA Astrophysics Data System (ADS)

    D'Ammando, F.; Torresi, E.

    2012-06-01

    The Large Area Telescope (LAT) on board the Fermi Gamma-ray Space Telescope has observed an increasing gamma-ray flux from a source positionally consistent with the Flat Spectrum Radio Quasar PKS 2326-502 (also known as 2FGL J2329.2-4956, Nolan et al. 2012, ApJS, 199, 31; R.A.=23:29:20.880 Dec.=-49:55:40.68, J2000.0, Costa and Loyola 1996, A&AS, 115, 75) at redshift z=0.518 (Jauncey et al. 1984, ApJ, 286, 498).

  20. Fermi/LAT search for counterpart to the IceCube event 67093193 (run 127853)

    NASA Astrophysics Data System (ADS)

    Vianello, G.; Magill, J. D.; Omodei, N.; Kocevski, D.; Ajello, M.; Buson, S.; Krauss, F.; Chiang, J.

    2016-04-01

    on behalf of the Fermi-LAT team: We have searched the Fermi Large Area Telescope data for a high-energy gamma-ray counterpart for the IceCube High Energy Starting Event (HESE) 67093193, detected in run 127853 on 2016-04-27 05:52:32.00 UT (AMON GCN notice rev. 2, http://gcn.gsfc.nasa.gov/notices_amon/67093193_127853.amon . See http://gcn.gsfc.nasa.gov/doc/Public_Doc_AMON_IceCube_GCN_Alerts_v2.pdf for a description of HESE events and related GCN notices).

  1. Fermi LAT Detection of a Gamma-ray Flare from the BL Lac Object ON 246

    NASA Astrophysics Data System (ADS)

    Becerra, Josefa

    2015-06-01

    The Large Area Telescope (LAT) on board the Fermi Gamma-ray Space Telescope has observed increasing gamma-ray flux from a source positionally consistent with the BL Lac object ON 246 (RA=187.55871 deg, Dec=25.30198 deg, J2000, Beasley et al. 2002, ApJS, 141, 13; with redshift z=0.135, Nass et al. 1996, A&A, 309, 419), also known as S3 1227+25 and 3FGL J1230.3+2519 (3FGL; Acero et al. 2015, arXiv:1501.02003).

  2. Fermi LAT and Swift flare of the FSRQ 4C +40.25

    NASA Astrophysics Data System (ADS)

    Carpenter, Bryce; Ojha, Roopesh; Pivato, Giovanna; Fermi Large Area Telescope Collaboration

    2015-11-01

    The Large Area Telescope (LAT) on board the Fermi Gamma-ray Space Telescope has observed a gamma-ray flare from a source positionally consistent with the flat spectrum radio quasar (FSRQ) 4C +40.25 (also known as B2 1020+40 and 3FGL J1023.1+3952, Acero et al. 2015, ApJS 218, 23) with coordinates RA: 10h 23m 11.5661s, Dec: 39d 48m 15.378s, J2000, (Helmboldt et al. 2007, ApJ, 658, 203) and a redshift of 1.254 (Xu et al. 1994, AJ, 108, 395).

  3. Millisecond Pulsars in the Galactic Bulge? An Extended Discussion on the Wavelet Analysis of the Fermi-LAT data

    NASA Astrophysics Data System (ADS)

    Bartels, Richard; Weniger, Christoph

    2017-01-01

    A clear excess in the Fermi-LAT data is present at energies around a few GeV. The spectrum of this so-called 'GeV excess' is remarkably similar to the expected annihilation signal of WIMP dark matter. However, a large bulge population of millisecond pulsars living below the Fermi-LAT detection threshold could also explain the excess spectrum. In a recent work we optimized the search for sub-threshold sources, by applying a wavelet transform to the Fermi-LAT gamma-ray data. In the Inner-Galaxy the wavelet signal is significantly enhanced, providing supportive evidence for the point source interpretation of the excess. In these proceedings we will extent our previous work with a spectral analysis and elaborate on the potential contamination from substructures in the gas.

  4. Searches for correlation between UHECR events and high-energy gamma­ray Fermi-LAT data

    NASA Astrophysics Data System (ADS)

    Mirabal, Nestor; Alvarez, Ezequiel; Cuoco, Alessandro; Zaharijas, Gabrijela; Fermi Collaboration

    2017-01-01

    The sources responsible for ultra high-energy cosmic rays (UHECRs) continue to be one of the most intriguing mysteries in astrophysics.We present a comprehensive search for correlations between high-energy (>= 1 GeV) gamma-ray events from the Fermi Large Area Telescope (LAT) and UHECRs (>= 60 EeV) detected by the Telescope Array and the Pierre Auger Observatory. We perform two separate searches. First, we conduct a standard cross-correlation analysis between the arrival directions of UHECRs and gamma-ray sources in the Second Catalog of Hard Fermi-LAT sources (2FHL). Second,we search for a possible correlation between UHECR directions and unresolved Fermi-LAT gamma-ray emission. We report our findings and their implications in the search for the origin of UHECRs.

  5. The Search for High Energy Extended Emission by Fermi-LAT from Swift-Localized Gamma-Ray Bursts

    SciTech Connect

    Chiang, J.; Racusin, J.L.; /NASA, Goddard

    2012-05-01

    The brighter Fermi-LAT bursts have exhibited emission at energies >0.1 GeV that persists as late as {approx}2 ks after the prompt phase has nominally ended. This so-called 'extended emission' could arise from continued activity of the prompt burst mechanism or it could be the start of a high energy afterglow component. The high energy extended emission seen by the LAT has typically followed a t{sup -}{gamma} power-law temporal decay where {gamma} {approx} 1.2-1.7 and has shown no strong indication of spectral evolution. In contrast, the prompt burst emission generally displays strong spectral variability and more complex temporal changes in the LAT band. This differing behavior suggests that the extended emission likely corresponds to an early afterglow phase produced by an external shock. In this study, we look for evidence of high energy extended emission from 145 Swift-localized GRBs that have occurred since the launch of Fermi. A majority of these bursts were either outside of the LAT field-of-view or were otherwise not detected by the LAT during the prompt phase. However, because of the scanning operation of the Fermi satellite, the long-lived extended emission of these bursts may be detectable in the LAT data on the {approx}few ks time scale. We will look for emission from individual bursts and will perform a stacking analysis in order to set bounds on this emission for the sample as a whole. The detection of such emission would have implications for afterglow models and for the overall energy budget of GRBs.

  6. Suenos Indocumentados: Using LatCrit to Explore the Testimonios of Undocumented and U.S. Born Chicana College Students on Discourses of Racist Nativism in Education

    ERIC Educational Resources Information Center

    Huber, Lindsay Perez

    2010-01-01

    Latina/o critical race theory (LatCrit) is used as an overarching framework that examines the intersectionality of race, class, and gender while also acknowledging the unique forms of subordination within the Latina/o community based on immigration status, language, phenotype, and ethnicity. LatCrit allows for the specific examination of race and…

  7. Clinical significance of coexpression of L-type amino acid transporter 1 (LAT1) and ASC amino acid transporter 2 (ASCT2) in lung adenocarcinoma

    PubMed Central

    Yazawa, Tomohiro; Shimizu, Kimihiro; Kaira, Kyoichi; Nagashima, Toshiteru; Ohtaki, Yoichi; Atsumi, Jun; Obayashi, Kai; Nagamori, Shushi; Kanai, Yoshikatsu; Oyama, Tetsunari; Takeyoshi, Izumi

    2015-01-01

    Background: L-type amino acid transporter 1 (LAT1) and ASC amino acid transporter 2 (ASCT2) have been associated with tumor growth and progression. However, the clinical significance of LAT1 and ASCT2 coexpression in the prognosis of patients with lung adenocarcinoma remains unclear. Methods: In total, 222 patients with surgically resected lung adenocarcinoma were investigated retrospectively. Tumor sections were stained immunohistochemically for LAT1, ASCT2, CD98, phosphorylated mammalian target-of-rapamycin (p-mTOR), and Ki-67, and microvessel density (MVD) was determined by staining for CD34. Epidermal growth factor receptor (EGFR) mutation status was also examined. Results: LAT1 and ASCT2 were positively expressed in 22% and 40% of cases, respectively. Coexpression of LAT1 and ASCT2 was observed in 12% of cases and was associated significantly with disease stage, lymphatic permeation, vascular invasion, CD98, Ki-67, and p-mTOR. Only LAT1 and ASCT2 coexpression indicated a poor prognosis for lung adenocarcinoma. Furthermore, this characteristic was recognized in early-stage patients, especially those who had wild-type, rather than mutated, EGFR. Multivariate analysis confirmed that the coexpression of LAT1 and ASCT2 was an independent factor for predicting poor outcome. Conclusions: LAT1 and ASCT2 coexpression is an independent prognostic factor for patients with lung adenocarcinoma, especially during the early stages, expressing wild-type EGFR. PMID:26279756

  8. Amino acid ester prodrugs conjugated to the α-carboxylic acid group do not display affinity for the L-type amino acid transporter 1 (LAT1).

    PubMed

    Rautio, Jarkko; Kärkkäinen, Jussi; Huttunen, Kristiina M; Gynther, Mikko

    2015-01-23

    L-type amino acid transporter (LAT1) is an intriguing target for carrier-mediated transport of drugs as it is highly expressed in the blood-brain barrier and also in various types of cancer. Several studies have proposed that in order for compounds to act as LAT1 substrates they should possess both negatively charged α-carboxyl and positively charged α-amino groups. However, in some reports, such as in two recent publications describing an isoleucine-quinidine ester prodrug (1), compounds having no free α-carboxyl group have been reported to exhibit high affinity for LAT1 in vitro. In the present study, 1 was synthesized and its affinity for LAT1 was evaluated both with an in situ rat brain perfusion technique and in the human breast cancer cell line MCF-7 in vitro. 1 showed no affinity for LAT1 in either model nor did it show any affinity for LAT2 in an in vitro study. Our results confirm the earlier reported requirements for LAT1 substrates. Thus drugs or prodrugs with substituted α-carboxyl group cannot bind to LAT with high affinity.

  9. Gamma Ray Bursts And Data Challenge One: Searching GRB in One Week of Simulated GLAST LAT Data

    SciTech Connect

    Longo, F.; Omodei, N.; Band, D.; Bonnell, J.T.; Brigida, M.; Cohen-Tanugi, J.; Giannitrapani, R.; Kamae, T.; Norris, J.P.; Winai, M.; /Trieste U. /INFN, Trieste /Siena U. /INFN, Pisa /NASA, Goddard /Bari U. /INFN, Bari /SLAC /Udine U.

    2006-02-22

    GLAST (Gamma-ray Large Area Space Telescope) is a gamma-ray astronomy mission that will be launched in mid 2007. The main instrument is the LAT (Large Area Telescope), a pair conversion telescope with sensitivity in the range 20 MeV-300 GeV. Data Challenge One (DC1) was the simulation of one week of observation of the entire gamma-ray sky by the LAT detector. the simulated data was similar to the real data, which allowed for the development of scientific software. In this paper they present the GRB simulations and the detection algorithms developed by the GLAST GRB and Solar Flare Science Team.

  10. Constraints on the Galactic Halo Dark Matter from Fermi-LAT Diffuse Measurements

    NASA Technical Reports Server (NTRS)

    Ackermann, M.; Ajello, M.; Atwood, W. B.; Baldini, L.; Barbiellini, G.; Bastieri, D.; Bechtol, K.; Bellazzini, R.; Blandford, R. D.; Bloom, E. D.; Bonamente, E.; Borgland, A. W.; Bottacini, E.; Brandt, Theresa J.; Bregeon, J.; Brigida, M.; Bruel, P.; Buehler, R.; Buson, S.; Caliandro, G. A.; Cameron, R. A.; Caraveo, P A.; Casandjian, J. M.; Cecchi, C.; Chekhtman, A.; Chiang, J.; Ciprini, S.; Claus, R.; Cohen-Tanugi, J.; Conrad, J.; Cuoco, A.; Guiriec, Sylvain Germain; McEnery, Julie E.; Scargle. J. D.; Troja, Eleonora

    2012-01-01

    We have performed an analysis of the diffuse gamma-ray emission with the Fermi Large Area Telescope (LAT) in the Milky Way halo region, searching for a signal from dark matter annihilation or decay. In the absence of a robust dark matter signal, constraints are presented. We consider both gamma rays produced directly in the dark matter annihilation/decay and produced by inverse Compton scattering of the e+/e- produced in the annihilation/decay. Conservative limits are derived requiring that the dark matter signal does not exceed the observed diffuse gamma-ray emission. A second set of more stringent limits is derived based on modeling the foreground astrophysical diffuse emission using the GALPROP code. Uncertainties in the height of the diffusive cosmic-ray halo, the distribution of the cosmic-ray sources in the Galaxy, the index of the injection cosmic-ray electron spectrum, and the column density of the interstellar gas are taken into account using a profile likelihood formalism, while the parameters governing the cosmic-ray propagation have been derived from fits to local cosmic-ray data. The resulting limits impact the range of particle masses over which dark matter thermal production in the early universe is possible, and challenge the interpretation of the PAMELA/Fermi-LAT cosmic ray anomalies as the annihilation of dark matter.

  11. Blind searches for radio-quiet gamma-ray pulsars with Fermi-LAT

    NASA Astrophysics Data System (ADS)

    Dormody, Michael Harry

    Blind searches for radio-quiet pulsars have been extremely fruitful, with over two dozen detected in searches of LAT point sources. While there is a general idea that the blind search sensitivity to radio-quiet gamma-ray pulsars is worse compared with the sensitivity to radio-loud pulsars, it has not been well established quantitatively. To achieve this, we simulate pulsars across a wide variety of rotational and spectral parameters, and search for pulsations in their corresponding LAT optimized positions. Using these results, we can estimate the detection threshold given a location on the sky and a spectral model. We also explore the benefit of using counterpart source locations from multiwavelength observations (e.g. X-rays). The sensitivity to blind searches can be used to estimate the gamma-ray pulsar birth distribution, an open question in pulsar astronomy. We use a model for galactic gamma-ray pulsars and evolve them to the present-day via the gravitational potential of the Galaxy. By comparing the resulting distribution with the known pulsar distribution, we can effectively rule out certain birth models at high confidence and place an estimate on the number of galactic gamma-ray pulsars.

  12. Search for gamma-ray emission from star-forming galaxies with Fermi LAT

    NASA Astrophysics Data System (ADS)

    Rojas-Bravo, César; Araya, Miguel

    2016-11-01

    Recent studies have found a positive correlation between the star formation rate (SFR) of galaxies and their gamma-ray luminosity. Galaxies with a high SFR are expected to produce a large amount of high-energy cosmic rays, which emit gamma-rays when interacting with the interstellar medium and radiation fields. We search for gamma-ray emission from a sample of galaxies within and beyond the Local Group with data from the LAT instrument onboard the Fermi satellite. We exclude recently detected galaxies (NGC 253, M82, NGC 4945, NGC 1068, NGC 2146, Arp 220) and use seven years of cumulative `Pass 8' data from the LAT in the 100 MeV to 100 GeV range. No new detections are seen in the data and upper limits for the gamma-ray fluxes are calculated. The correlation between gamma-ray luminosity and infrared luminosity for galaxies obtained using our new upper limits is in agreement with a previously published correlation, but the new upper limits imply that some galaxies are not as efficient gamma-ray emitters as previously thought.

  13. Fermi LAT Observations of Gamma-Ray Transients Near the Galactic Plane

    NASA Technical Reports Server (NTRS)

    Hays, Elizabeth Anne

    2010-01-01

    The Large Area Telescope (LAT) on the Fermi Gamma-ray Space Telescope provides unprecedented sensitivity for all-sky monitoring of gamma-ray activity from 20 MeV to >300 GeV. The observatory scans the entire sky every three hours and allows a general search for flaring activity on daily timescales. This search is conducted automatically as part of the ground processing and allows a fast response to transient events, typically less than a day. Most flares are spatially associated with known blazars, but in several cases during the first year of observations, gamma-ray flares occurring near the Galactic plane did not reveal any initially compelling counterparts. This prompted follow-up observations in X-ray, optical, and radio to attempt to identify the origin of the emission and probe the possible existence of a class of transient gamma-ray sources in the Galaxy. We will report on the details of these LAT events and the results of the multi-wavelength counterpart searches.

  14. Fermi LAT Observations of the Crab Nebula During the Exceptional April 2011 Outburst

    NASA Technical Reports Server (NTRS)

    Hays, Elizabeth

    2012-01-01

    The Crab Nebula, formerly thought to be steady in gamma rays, shows unexpected and occasionally dramatic variability in high-energy gamma rays. The Large Area Telescope (LAT) on Fermi recorded several strong outbursts, including dedicated pointed observations of the brightest yet seen, a spectacular flare in April 2011. These observations provide a particularly detailed look at the temporal and spectral characteristics of the nebula during the flare. The LAT data show an additional component in the spectral energy distribution that peaks at a maximum of $375\\pm26\\mathrm{MeV}$. In the probable scenario that this component is synchrotron emission, the electrons are accelerated to extreme energies that are difficult to reconcile with the very rapid change in flux and the expectation for acceleration processes and conditions occurring within the pulsar wind nebula. The physical location and mechanism driving the flares remains undetermined despite observations across the spectrum made by a variety of instruments including the Hubble Space Telescope, the Chandra X-ray Observatory, and the Very Large Array. I will present timing and spectral studies of the high-energy gamma-ray data, discuss implications for the origin of the flares, and highlight preparations for the next major flare.

  15. The First Fermi-LAT Catalog of Sources Above 10 GeV

    NASA Technical Reports Server (NTRS)

    Ackermann, M.; Ajello, M.; Allafort, A.; Atwood, W. B.; Baldini, L.; Ballet, J.; Barbiellini, G.; Bastieri, D.; Bechtol, K.; Moiseev, Alexander A.

    2013-01-01

    We present a catalog of gamma-ray sources at energies above 10 GeV based on data from the Large Area Telescope (LAT) accumulated during the first 3 yr of the Fermi Gamma-ray Space Telescope mission. The first Fermi-LAT catalog of >10 GeV sources (1FHL) has 514 sources. For each source we present location, spectrum, a measure of variability, and associations with cataloged sources at other wavelengths. We found that 449 (87%) could be associated with known sources, of which 393 (76% of the 1FHL sources) are active galactic nuclei. Of the 27 sources associated with known pulsars, we find 20 (12) to have significant pulsations in the range >10 GeV (>25 GeV). In this work we also report that, at energies above 10 GeV, unresolved sources account for 27% +/- 8% of the isotropic ? -ray background, while the unresolved Galactic population contributes only at the few percent level to the Galactic diffuse background. We also highlight the subset of the 1FHL sources that are best candidates for detection at energies above 50-100 GeV with current and future ground-based ? -ray observatories.

  16. The First Fermi-LAT SNR Catalog: GeV Characteristics and Cosmic Ray Implications

    NASA Astrophysics Data System (ADS)

    Brandt, T. J.; Acero, F.; de Palma, F.; Hewitt, J.; Renaud, M.; Fermi-LAT Collaboration

    2015-08-01

    Galactic cosmic rays (CR) sources, classically proposed to be Supernova Remnants (SNRs), must meet the energetic particle content required by direct measurements of high energy CRs. Indirect gamma-ray measurements of SNRs with the Fermi Large Area Telescope (LAT) have now shown directly that at least three SNRs accelerate protons. With the first Fermi LAT SNR Catalog, we have systematically characterized the GeV gamma-rays emitted by 279 SNRs known primarily from radio surveys. We present these sources in a multiwavelength context, including studies of correlations between GeV and radio size, flux, and index, TeV index, and age and environment tracers, in order to better understand effects of evolution and environment on the GeV emission. We show that previously sufficient models of SNRs' GeV emission no longer adequately describe the data. To address the question of CR origins, we also examine the SNRs' maximal CR contribution assuming the GeV emission arises solely from proton interactions. Improved breadth and quality of multiwavelength data, including distances and local densities, and more, higher resolution gamma-ray data with correspondingly improved Galactic diffuse models will strengthen this constraint.

  17. POLARIZATION AND VARIATION OF NEAR-INFRARED LIGHT FROM FERMI/LAT {gamma}-RAY SOURCES

    SciTech Connect

    Fujiwara, M.; Matsuoka, Y.; Ienaka, N.

    2012-10-01

    We present the results of our follow-up observation program of {gamma}-ray sources detected by the Large Area Telescope (LAT) on board the Fermi Gamma-ray Space Telescope. Twenty-six blazars and thirty-nine sources unidentified at other wavelengths were targeted at the Infrared Survey Facility 1.4 m telescope equipped with the SIRIUS/SIRPOL imager and polarimeter. H-band magnitudes of the blazars at the epoch of 2010 December-2011 February are presented, which reveal clear flux variation since the Two Micron All Sky Survey observations and can be useful data for variation analyses of these objects in longer periods. We also find that nearly half of the {gamma}-ray blazars are highly (>10%) polarized in near-infrared wavelengths. Combining the polarization and variation properties, most ({approx}90%) of the blazars are clearly distinguished from all other types of objects at high Galactic latitudes. On the other hand, we find only one highly polarized and/or variable object in the fields of unidentified sources. This object is a counterpart of the optical variable source PQV1 J131553.00-073302.0 and the radio source NVSS J131552-073301 and is a promising candidate of new {gamma}-ray blazars. From the measured polarization and variation statistics, we conclude that most of the Fermi/LAT unidentified sources are not likely similar types of objects to the known {gamma}-ray blazars.

  18. Search for Large Extra Dimensions Based on Observations of Neutron Stars with the Fermi-LAT

    SciTech Connect

    Berenji, Bijan

    2012-09-19

    Large extra dimensions (LED) have been proposed to account for the apparent weakness of gravitation. These theories also indicate that the postulated massive Kaluza-Klein (KK) gravitons may be produced by nucleon-nucleon bremsstrahlung in the course of core collapse of supernovae. Hannestad and Raffelt have predicted energy spectra of gamma ray emission from the decay of KK gravitons trapped by the gravity of the remnant neutron stars (NS). These and other authors have used EGRET data on NS to obtain stringent limits on LED. Fermi-LAT is observing radio pulsar positions obtained from radio and x-ray catalogs. NS with certain characteristics are unlikely emitter of gamma rays, and emit in radio and perhaps x-rays. This talk will focus on the blind analysis we plan to perform, which has been developed using the 1st 2 months of all sky data and Monte Carlo simulations, to obtain limits on LED based on about 1 year of Fermi-LAT data. Preliminary limits from this analysis using these first 2 months of data will be also be discussed.

  19. Radio Detection of the Fermi-LAT Blind Search Millisecond Pulsar J1311-3430

    NASA Technical Reports Server (NTRS)

    Ray, P. S.; Ransom, S. M.; Cheung, C. C.; Giroletti, M.; Cognard, I.; Camilo, F.; Bhattacharyya, B.; Roy, J.; Romani, R. W.; Ferrara, E. C.; Guillemot, L.; Johnston, S.; Keith, M.; Kerr, M.; Kramer, M.; Pletsch, H. J.; Parkinson, P. M. Saz

    2013-01-01

    We report the detection of radio emission from PSR J1311.3430, the first millisecond pulsar (MSP) discovered in a blind search of Fermi Large Area Telescope (LAT) gamma-ray data. We detected radio pulsations at 2 GHz, visible for less than 10% of approximately 4.5 hr of observations using the Green Bank Telescope (GBT). Observations at 5 GHz with the GBT and at several lower frequencies with Parkes, Nan cay, and the Giant Metrewave Radio Telescope resulted in non-detections. We also report the faint detection of a steep spectrum continuum radio source (0.1 mJy at 5 GHz) in interferometric imaging observations with the Jansky Very Large Array. These detections demonstrate that PSR J1311.3430 is not radio quiet and provide additional evidence that radio-quiet MSPs are rare. The radio dispersion measure of 37.8 pc cm(exp -3) provides a distance estimate of 1.4 kpc for the system, yielding a gamma-ray efficiency of 30%, typical of LAT-detected MSPs. We see apparent excess delay in the radio pulses as the pulsar appears from eclipse and we speculate on possible mechanisms for the non-detections of the pulse at other orbital phases and observing frequencies.

  20. FERMI-LAT OBSERVATIONS OF HIGH-ENERGY γ-RAY EMISSION TOWARD THE GALACTIC CENTER

    SciTech Connect

    Ajello, M.; Albert, A.; Blandford, R. D.; Bloom, E. D.; Bottacini, E.; Caliandro, G. A.; Cameron, R. A.; Atwood, W. B.; Caputo, R.; Barbiellini, G.; Bastieri, D.; Buson, S.; Bechtol, K.; Bellazzini, R.; Bissaldi, E.; Bonino, R.; Brandt, T. J.; Bregeon, J.; and others

    2016-03-01

    The Fermi Large Area Telescope (LAT) has provided the most detailed view to date of the emission toward the Galactic center (GC) in high-energy γ-rays. This paper describes the analysis of data taken during the first 62 months of the mission in the energy range 1–100 GeV from a 15° × 15° region about the direction of the GC. Specialized interstellar emission models (IEMs) are constructed to enable the separation of the γ-ray emissions produced by cosmic ray particles interacting with the interstellar gas and radiation fields in the Milky Way into that from the inner ∼1 kpc surrounding the GC, and that from the rest of the Galaxy. A catalog of point sources for the 15° × 15° region is self-consistently constructed using these IEMs: the First Fermi-LAT Inner Galaxy Point Source Catalog (1FIG). The spatial locations, fluxes, and spectral properties of the 1FIG sources are presented, and compared with γ-ray point sources over the same region taken from existing catalogs. After subtracting the interstellar emission and point-source contributions a residual is found. If templates that peak toward the GC are used to model the positive residual the agreement with the data improves, but none of the additional templates tried account for all of its spatial structure. The spectrum of the positive residual modeled with these templates has a strong dependence on the choice of IEM.

  1. Fermi-LAT kills dark matter interpretations of AMS-02 data. Or not?

    NASA Astrophysics Data System (ADS)

    Belotsky, Konstantin; Budaev, Ruslan; Kirillov, Alexander; Laletin, Maxim

    2017-01-01

    A number of papers attempt to explain the positron anomaly in cosmic rays, observed by PAMELA and AMS-02, in terms of dark matter (DM) decays or annihilations. However, the recent progress in cosmic gamma-ray studies challenges these attempts. Indeed, as we show, any rational DM model explaining the positron anomaly abundantly produces final state radiation and Inverse Compton gamma rays, which inevitably leads to a contradiction with Fermi-LAT isotropic diffuse gamma-ray background measurements. Furthermore, the Fermi-LAT observation of Milky Way dwarf satellites, supposed to be rich in DM, revealed no significant signal in gamma rays. We propose a generic approach in which the major contribution to cosmic rays comes from the dark matter disc and prove that the tension between the DM origin of the positron anomaly and the cosmic gamma-ray observations can be relieved. We consider both a simple model, in which DM decay/annihilate into charged leptons, and a model-independent minimal case of particle production, and we estimate the optimal thickness of DM disk. Possible mechanisms of formation and its properties are briefly discussed.

  2. GRB2-Mediated Recruitment of THEMIS to LAT Is Essential for Thymocyte Development

    PubMed Central

    Paster, Wolfgang; Brockmeyer, Claudia; Fu, Guo; Simister, Philip C.; de Wet, Ben; Martinez-Riaño, Ana; Hoerter, John A. H.; Feller, Stephan M.; Wülfing, Christoph; Gascoigne, Nicholas R. J.

    2013-01-01

    Thymocyte-expressed molecule involved in selection (THEMIS) is a recently identified regulator of thymocyte positive selection. THEMIS’s mechanism of action is unknown, and whether it has a role in TCR-proximal signaling is controversial. In this article, we show that THEMIS and the adapter molecule growth factor receptor–bound protein 2 (GRB2) associate constitutively through binding of a conserved PxRPxK motif within the proline-rich region 1 of THEMIS to the C-terminal SH3-domain of GRB2. This association is indispensable for THEMIS recruitment to the immunological synapse via the transmembrane adapter linker for activation of T cells (LAT) and for THEMIS phosphorylation by Lck and ZAP-70. Two major sites of tyrosine phosphorylation were mapped to a YY-motif close to proline-rich region 1. The YY-motif was crucial for GRB2 binding, suggesting that this region of THEMIS might control local phosphorylation-dependent conformational changes important for THEMIS function. Finally, THEMIS binding to GRB2 was required for thymocyte development. Our data firmly assign THEMIS to the TCR-proximal signaling cascade as a participant in the LAT signalosome and suggest that the THEMIS–GRB2 complex might be involved in shaping the nature of Ras signaling, thereby governing thymic selection. PMID:23460737

  3. EINSTEIN@HOME DISCOVERY OF FOUR YOUNG GAMMA-RAY PULSARS IN FERMI LAT DATA

    SciTech Connect

    Pletsch, H. J.; Allen, B.; Aulbert, C.; Bock, O.; Eggenstein, H. B.; Fehrmann, H.; Machenschalk, B.; Papa, M. A.; Guillemot, L.; Champion, D. J.; Karuppusamy, R.; Kramer, M.; Ng, C.; Anderson, D.; Hammer, D.; Siemens, X.; Keith, M.; Ray, P. S. E-mail: lucas.guillemot@cnrs-orleans.fr

    2013-12-10

    We report the discovery of four gamma-ray pulsars, detected in computing-intensive blind searches of data from the Fermi Large Area Telescope (LAT). The pulsars were found using a novel search approach, combining volunteer distributed computing via Einstein@Home and methods originally developed in gravitational-wave astronomy. The pulsars PSRs J0554+3107, J1422–6138, J1522–5735, and J1932+1916 are young and energetic, with characteristic ages between 35 and 56 kyr and spin-down powers in the range 6 × 10{sup 34}—10{sup 36} erg s{sup –1}. They are located in the Galactic plane and have rotation rates of less than 10 Hz, among which the 2.1 Hz spin frequency of PSR J0554+3107 is the slowest of any known gamma-ray pulsar. For two of the new pulsars, we find supernova remnants coincident on the sky and discuss the plausibility of such associations. Deep radio follow-up observations found no pulsations, suggesting that all four pulsars are radio-quiet as viewed from Earth. These discoveries, the first gamma-ray pulsars found by volunteer computing, motivate continued blind pulsar searches of the many other unidentified LAT gamma-ray sources.

  4. The first fermi-lat catalog of sources above 10 GeV

    SciTech Connect

    Ackermann, M.; Ajello, M.; Allafort, A.; Atwood, W. B.; Baldini, L.; Ballet, J.; Barbiellini, G.; Bastieri, D.; Bechtol, K.; Belfiore, A.; Bellazzini, R.; Bernieri, E.; Bissaldi, E.; Bloom, E. D.; Bonamente, E.; Brandt, T. J.; Bregeon, J.; Brigida, M.; Bruel, P.; Buehler, R.; Burnett, T. H.; Buson, S.; Caliandro, G. A.; Cameron, R. A.; Campana, R.; Caraveo, P. A.; Casandjian, J. M.; Cavazzuti, E.; Cecchi, C.; Charles, E.; Chaves, R. C. G.; Chekhtman, A.; Cheung, C. C.; Chiang, J.; Chiaro, G.; Ciprini, S.; Claus, R.; Cohen-Tanugi, J.; Cominsky, L. R.; Conrad, J.; Cutini, S.; D'Ammando, F.; de Angelis, A.; de Palma, F.; Dermer, C. D.; Desiante, R.; Digel, S. W.; Di Venere, L.; Drell, P. S.; Drlica-Wagner, A.; Favuzzi, C.; Fegan, S. J.; Ferrara, E. C.; Focke, W. B.; Fortin, P.; Franckowiak, A.; Funk, S.; Fusco, P.; Gargano, F.; Gasparrini, D.; Gehrels, N.; Germani, S.; Giglietto, N.; Giommi, P.; Giordano, F.; Giroletti, M.; Godfrey, G.; Gomez-Vargas, G. A.; Grenier, I. A.; Guiriec, S.; Hadasch, D.; Hanabata, Y.; Harding, A. K.; Hayashida, M.; Hays, E.; Hewitt, J.; Hill, A. B.; Horan, D.; Hughes, R. E.; Jogler, T.; Jóhannesson, G.; Johnson, A. S.; Johnson, T. J.; Johnson, W. N.; Kamae, T.; Kataoka, J.; Kawano, T.; Knödlseder, J.; Kuss, M.; Lande, J.; Larsson, S.; Latronico, L.; Lemoine-Goumard, M.; Longo, F.; Loparco, F.; Lott, B.; Lovellette, M. N.; Lubrano, P.; Massaro, E.; Mayer, M.; Mazziotta, M. N.; McEnery, J. E.; Mehault, J.; Michelson, P. F.; Mizuno, T.; Moiseev, A. A.; Monzani, M. E.; Morselli, A.; Moskalenko, I. V.; Murgia, S.; Nemmen, R.; Nuss, E.; Ohsugi, T.; Okumura, A.; Orienti, M.; Ormes, J. F.; Paneque, D.; Perkins, J. S.; Pesce-Rollins, M.; Piron, F.; Pivato, G.; Porter, T. A.; Rainò, S.; Razzano, M.; Reimer, A.; Reimer, O.; Reposeur, T.; Ritz, S.; Romani, R. W.; Roth, M.; Saz Parkinson, P. M.; Schulz, A.; Sgrò, C.; Siskind, E. J.; Smith, D. A.; Spandre, G.; Spinelli, P.; Stawarz, Łukasz; Strong, A. W.; Suson, D. J.; Takahashi, H.; Thayer, J. G.; Thayer, J. B.; Thompson, D. J.; Tibaldo, L.; Tinivella, M.; Torres, D. F.; Tosti, G.; Troja, E.; Uchiyama, Y.; Usher, T. L.; Vandenbroucke, J.; Vasileiou, V.; Vianello, G.; Vitale, V.; Werner, M.; Winer, B. L.; Wood, K. S.; Wood, M.

    2013-11-14

    We present a catalog of gamma-ray sources at energies above 10 GeV based on data from the Large Area Telescope (LAT) accumulated during the first three years of the Fermi Gamma-ray Space Telescope mission. The first Fermi-LAT catalog of >10GeV sources (1FHL) has 514 sources. For each source we present location, spectrum, a measure of variability, and associations with cataloged sources at other wavelengths. We found that 449 (87%) could be associated with known sources, of which 393 (76% of the 1FHL sources) are active galactic nuclei. Of the 27 sources associated with known pulsars, we find 20 (12) to have significant pulsations in the range >10GeV (>25GeV). In this work we also report that, at energies above 10 GeV, unresolved sources account for 27+/-8 % of the isotropic gamma-ray background, while the unresolved Galactic population contributes only at the few percent level to the Galactic diffuse background. We also highlight the subset of the 1FHL sources that are best candidates for detection at energies above 50-100 GeV with current and future ground-based gamma-ray observatories.

  5. CONSTRAINTS ON THE GALACTIC HALO DARK MATTER FROM FERMI-LAT DIFFUSE MEASUREMENTS

    SciTech Connect

    Ackermann, M.; Ajello, M.; Bechtol, K.; Blandford, R. D.; Bloom, E. D.; Borgland, A. W.; Bottacini, E.; Buehler, R.; Atwood, W. B.; Baldini, L.; Barbiellini, G.; Bastieri, D.; Buson, S.; Bellazzini, R.; Bregeon, J.; Bonamente, E.; Brandt, T. J.; Brigida, M.; Bruel, P.; and others

    2012-12-20

    We have performed an analysis of the diffuse gamma-ray emission with the Fermi Large Area Telescope (LAT) in the Milky Way halo region, searching for a signal from dark matter annihilation or decay. In the absence of a robust dark matter signal, constraints are presented. We consider both gamma rays produced directly in the dark matter annihilation/decay and produced by inverse Compton scattering of the e {sup +}/e {sup -} produced in the annihilation/decay. Conservative limits are derived requiring that the dark matter signal does not exceed the observed diffuse gamma-ray emission. A second set of more stringent limits is derived based on modeling the foreground astrophysical diffuse emission using the GALPROP code. Uncertainties in the height of the diffusive cosmic-ray halo, the distribution of the cosmic-ray sources in the Galaxy, the index of the injection cosmic-ray electron spectrum, and the column density of the interstellar gas are taken into account using a profile likelihood formalism, while the parameters governing the cosmic-ray propagation have been derived from fits to local cosmic-ray data. The resulting limits impact the range of particle masses over which dark matter thermal production in the early universe is possible, and challenge the interpretation of the PAMELA/Fermi-LAT cosmic ray anomalies as the annihilation of dark matter.

  6. RADIO DETECTION OF THE FERMI-LAT BLIND SEARCH MILLISECOND PULSAR J1311-3430

    SciTech Connect

    Ray, P. S.; Wood, K. S.; Ransom, S. M.; Cheung, C. C.; Giroletti, M.; Cognard, I.; Camilo, F.; Bhattacharyya, B.; Roy, J.; Romani, R. W.; Kerr, M.; Ferrara, E. C.; Guillemot, L.; Kramer, M.; Johnston, S.; Keith, M.; Pletsch, H. J.; Saz Parkinson, P. M.

    2013-01-20

    We report the detection of radio emission from PSR J1311-3430, the first millisecond pulsar (MSP) discovered in a blind search of Fermi Large Area Telescope (LAT) gamma-ray data. We detected radio pulsations at 2 GHz, visible for <10% of {approx}4.5 hr of observations using the Green Bank Telescope (GBT). Observations at 5 GHz with the GBT and at several lower frequencies with Parkes, Nancay, and the Giant Metrewave Radio Telescope resulted in non-detections. We also report the faint detection of a steep spectrum continuum radio source (0.1 mJy at 5 GHz) in interferometric imaging observations with the Jansky Very Large Array. These detections demonstrate that PSR J1311-3430 is not radio quiet and provide additional evidence that radio-quiet MSPs are rare. The radio dispersion measure of 37.8 pc cm{sup -3} provides a distance estimate of 1.4 kpc for the system, yielding a gamma-ray efficiency of 30%, typical of LAT-detected MSPs. We see apparent excess delay in the radio pulses as the pulsar appears from eclipse and we speculate on possible mechanisms for the non-detections of the pulse at other orbital phases and observing frequencies.

  7. Study of LAT1 Expression in Brain Metastases: Towards a Better Understanding of the Results of Positron Emission Tomography Using Amino Acid Tracers

    PubMed Central

    Papin-Michault, Caroline; Bonnetaud, Christelle; Dufour, Maxime; Almairac, Fabien; Coutts, Mickael; Patouraux, Stéphanie; Virolle, Thierry; Darcourt, Jacques; Burel-Vandenbos, Fanny

    2016-01-01

    Positron emission tomography using radiolabeled amino acid (PET-AA) appears to be promising in distinguishing between recurrent tumour and radionecrosis in the follow-up of brain metastasis (BM). The amino acid transporter LAT1 and its cofactor CD98, which are involved in AA uptake, have never been investigated in BM. The aim of our study was to determine and compare the expression of LAT1 and CD98 in BM and in non-tumoral brain tissue (NT). The expression of LAT1 and CD98 were studied by immunohistochemistry in 67 BM, including 18 BM recurrences after radiotherapy, in 53 NT, and in 13 cases of patients with previously irradiated brain tumor and investigated by [18F] FDOPA-PET. LAT1 and CD98 expression were detected in 98.5% and 59.7% of BM respectively and were significantly associated with BM tissue as compared to NT (p<0.001). LAT1 expression in recurrent BM was significantly increased as compared to newly occurring BM. Ten cases investigated by [18F] FDOPA-PET corresponding to recurrent BM displayed significant [18F] FDOPA uptake and LAT1 overexpression whereas three cases corresponding to radionecrosis showed no or low uptake and LAT1 expression. LAT1 expression level and [18F] FDOPA uptake were significantly correlated. In conclusion, we hypothesized that BM may overexpress the AA transporter LAT1. We have shown that LAT1 overexpression was common in BM and was specific for BM as compared to healthy brain. These results could explain the specific BM uptake on PET-AA. PMID:27276226

  8. Confronting recent AMS-02 positron fraction and Fermi-LAT extragalactic γ-ray background measurements with gravitino dark matter

    NASA Astrophysics Data System (ADS)

    Carquín, Edson; Díaz, Marco A.; Gómez-Vargas, Germán A.; Panes, Boris; Viaux, Nicolás

    2016-03-01

    Recent positron flux fraction measurements in cosmic-rays (CR) made by the AMS-02 detector confirm and extend the evidence on the existence of a new (yet unknown) source of high energy electrons and positrons. We test the gravitino dark matter of bilinear R-parity violating supersymmetric models as this electrons/positrons source. Being a long lived weak-interacting and spin 3/2 particle, it offers several particularities which makes it an attractive dark matter candidate. We compute the electron, positron and γ-ray fluxes produced by each gravitino decay channel as it would be detected at the Earth's position. Combining the flux from the different decay modes we are able to reproduce AMS-02 measurements of the positron fraction, as well as the electron and positron fluxes, with a gravitino dark matter mass in the range 1-3 TeV and lifetime of ˜1.0-0.7×1026 s. The high statistics measurement of electron and positron fluxes, and the flattening in the behaviour of the positron fraction recently found by AMS-02 allow us to determine that the preferred gravitino decaying mode by the fit is W±τ∓, unlike previous analyses. Then we study the viability of these scenarios through their implication in γ-ray observations. For this we use the Extragalactic γ-ray Background recently reported by the Fermi-LAT Collaboration and a state-of-the-art model of its known contributors. Based on the γ-ray analysis we exclude the gravitino parameter space which provides an acceptable explanation of the AMS-02 data. Therefore, we conclude that the gravitino of bilinear R-parity violating models is ruled out as the unique primary source of electrons and positrons needed to explain the rise in the positron fraction.

  9. Specificity of quantitative latex agglutination assay for D-dimer in exclusion of pulmonary embolism in the emergency department.

    PubMed

    Stein, Paul D; Matta, Fadi; Sabra, Michel J; Tana, Christopher; Gough, Andrew; Chabala, Steve; Kakish, Edward; Tworek, Joseph

    2014-11-01

    We assessed the prevalence of elevated quantitative latex agglutination assay for D-dimer in patients in the emergency department in whom pulmonary embolism (PE) was excluded. D-dimer was normal (<230 ng/mL) in 435 (83%) of the 522 patients. D-dimer was normal in 88% of the patients with musculoskeletal or related chest pain, 74% with pleurisy or pleuritic chest pain, and 85% with upper respiratory tract infection. D-dimer was 230 to 500 ng/mL in 65 (75%) of the 87 in whom D-dimer was elevated. Clinical probability was low in 31 (48%) of the 65 patients with D-dimer levels of 230 to 500 ng/mL. D-dimer was 230 to 500 ng/mL and clinical probability was low in 31 (36%) of the 87 patients who had computed tomographic (CT) angiograms because of elevated D-dimer. Negative likelihood ratio for PE is sufficiently low that PE can be excluded with reasonable certainty in such patients. Tailoring cutoff value to 500 ng/mL in patients with low clinical probability would have reduced CT angiograms by 36%.

  10. Improved detection of nasopharyngeal cocolonization by multiple pneumococcal serotypes by use of latex agglutination or molecular serotyping by microarray.

    PubMed

    Turner, Paul; Hinds, Jason; Turner, Claudia; Jankhot, Auscharee; Gould, Katherine; Bentley, Stephen D; Nosten, François; Goldblatt, David

    2011-05-01

    Identification of Streptococcus pneumoniae in the nasopharynx is critical for an understanding of transmission, estimates of vaccine efficacy, and possible replacement disease. Conventional nasopharyngeal swab (NPS) culture and serotyping (the WHO protocol) is likely to underestimate multiple-serotype carriage. We compared the WHO protocol with methods aimed at improving cocolonization detection. One hundred twenty-five NPSs from an infant pneumococcal-carriage study, containing ≥ 1 serotype by WHO culture, were recultured in duplicate. A sweep of colonies from one plate culture was serotyped by latex agglutination. DNA extracted from the second plate was analyzed by S. pneumoniae molecular-serotyping microarray. Multiple serotypes were detected in 11.2% of the swabs by WHO culture, 43.2% by sweep serotyping, and 48.8% by microarray. Sweep and microarray were more likely to detect multiple serotypes than WHO culture (P < 0.0001). Cocolonization detection rates were similar between microarray and sweep, but the microarray identified the greatest number of serotypes. A common serogroup type was identified in 95.2% of swabs by all methods. WHO methodology significantly underestimates multiple-serotype carriage compared to these alternate methods. Sweep serotyping is cost-effective and field deployable but may fail to detect serotypes at low abundance, whereas microarray serotyping is more costly and technology dependent but may detect these additional minor carried serotypes.

  11. Fermi LAT Detection of a Hard Spectrum Gamma-ray Flare from the FSRQ S4 0954+65

    NASA Astrophysics Data System (ADS)

    Ojha, Roopesh; Carpenter, Bryce; Tanaka, Yasuyuki

    2015-02-01

    The Large Area Telescope (LAT) on board the Fermi Gamma-ray Space Telescope has observed an unusually hard spectrum gamma-ray flare from the flat spectrum radio quasar (FSRQ) S4 0954+65 (3FGL J0958.6+6534; RA: 149.696855, Dec: +65.565227, J2000, Johnston et al. 1995, AJ, 110, 880).

  12. GRB2 Nucleates T Cell Receptor-Mediated LAT Clusters That Control PLC-γ1 Activation and Cytokine Production

    PubMed Central

    Bilal, Mahmood Yousif; Houtman, Jon C. D.

    2015-01-01

    GRB2 is a ubiquitously expressed adaptor protein required for signaling downstream of multiple receptors. To address the role of GRB2 in receptor-mediated signaling, the expression of GRB2 was suppressed in human CD4+ T cells and its role downstream of the T cell receptor (TCR) was examined. Interestingly, GRB2 deficient T cells had enhanced signaling from complexes containing the TCR. However, GRB2 deficient T cells had substantially reduced production of IL-2 and IFN-γ. This defect was attributed to diminished formation of linker for activation of T cells (LAT) signaling clusters, which resulted in reduced MAP kinase activation, calcium flux, and PLC-γ1 recruitment to LAT signaling clusters. Add back of wild-type GRB2, but not a novel N-terminal SH3 domain mutant, rescued LAT microcluster formation, calcium mobilization, and cytokine release, providing the first direct evidence that GRB2, and its ability to bind to SH3 domain ligands, is required for establishing LAT microclusters. Our data demonstrate that the ability of GRB2 to facilitate protein clusters is equally important in regulating TCR-mediated functions as its capacity to recruit effector proteins. This highlights that GRB2 regulates signaling downstream of adaptors and receptors by both recruiting effector proteins and regulating the formation of signaling complexes. PMID:25870599

  13. miR-21 modulates resistance of HR-HPV positive cervical cancer cells to radiation through targeting LATS1.

    PubMed

    Liu, Shikai; Song, Lili; Zhang, Liang; Zeng, Saitian; Gao, Fangyuan

    2015-04-17

    Although multiple miRNAs are found involved in radioresistance development in HR-HPV positive (+) cervical cancer, only limited studies explored the regulative mechanism of the miRNAs. miR-21 is one of the miRNAs significantly upregulated in HR-HPV (+) cervical cancer is also significantly associated with radioresistance. However, the detailed regulative network of miR-21 in radioresistance is still not clear. In this study, we confirmed that miR-21 overexpression was associated with higher level of radioresistance in HR-HPV (+) cervical cancer patients and thus decided to further explore its role. Findings of this study found miR-21 can negatively affect radiosensitivity of HR-HPV (+) cervical cancer cells and decrease radiation induced G2/M block and increase S phase accumulation. By using dual luciferase assay, we verified a binding site between miR-21 and 3'-UTR of large tumor suppressor kinase 1 (LATS1). Through direct binding, miR-21 can regulate LATS1 expression in cervical cancer cells. LATS1 overexpression can reverse miR-21 induced higher colony formation rate and also reduced miR-21 induced S phase accumulation and G2/M phase block reduction under radiation treatment. These results suggested that miR-21-LATS1 axis plays an important role in regulating radiosensitivity.

  14. GRB2 Nucleates T Cell Receptor-Mediated LAT Clusters That Control PLC-γ1 Activation and Cytokine Production.

    PubMed

    Bilal, Mahmood Yousif; Houtman, Jon C D

    2015-01-01

    GRB2 is a ubiquitously expressed adaptor protein required for signaling downstream of multiple receptors. To address the role of GRB2 in receptor-mediated signaling, the expression of GRB2 was suppressed in human CD4+ T cells and its role downstream of the T cell receptor (TCR) was examined. Interestingly, GRB2 deficient T cells had enhanced signaling from complexes containing the TCR. However, GRB2 deficient T cells had substantially reduced production of IL-2 and IFN-γ. This defect was attributed to diminished formation of linker for activation of T cells (LAT) signaling clusters, which resulted in reduced MAP kinase activation, calcium flux, and PLC-γ1 recruitment to LAT signaling clusters. Add back of wild-type GRB2, but not a novel N-terminal SH3 domain mutant, rescued LAT microcluster formation, calcium mobilization, and cytokine release, providing the first direct evidence that GRB2, and its ability to bind to SH3 domain ligands, is required for establishing LAT microclusters. Our data demonstrate that the ability of GRB2 to facilitate protein clusters is equally important in regulating TCR-mediated functions as its capacity to recruit effector proteins. This highlights that GRB2 regulates signaling downstream of adaptors and receptors by both recruiting effector proteins and regulating the formation of signaling complexes.

  15. ATel 7453: Fermi LAT detection of a GeV flare from the FSRQ PKS 2032+107

    NASA Astrophysics Data System (ADS)

    Orienti, M.; D'Ammando, F.; Fermi Large Area Telescope Collaboration

    2015-04-01

    The Large Area Telescope (LAT), on board the Fermi Gamma-ray Space Telescope, has observed gamma-ray flaring activity from a source positionally consistent with the flat spectrum radio quasar PKS 2032+107 (also known as 3FGL J2035.3+1055, Acero et al. ...

  16. Large amino acid transporter 1 (LAT1) prodrugs of valproic acid: new prodrug design ideas for central nervous system delivery.

    PubMed

    Peura, Lauri; Malmioja, Kalle; Laine, Krista; Leppänen, Jukka; Gynther, Mikko; Isotalo, Antti; Rautio, Jarkko

    2011-10-03

    Central nervous system (CNS) drug delivery is a major challenge in drug development because the blood-brain barrier (BBB) efficiently restricts the entry of drug molecules into the CNS at sufficient amounts. The brain uptake of poorly penetrating drugs could be improved by utilizing the transporters at the BBB with a prodrug approach. In this study, we designed four phenylalanine derivatives of valproic acid and studied their ability to utilize a large amino acid transporter 1 (LAT1) in CNS delivery with an aim to show that the meta-substituted phenylalanine prodrugs bind to LAT1 with a higher affinity compared with the affinity of the para-substituted derivatives. All of the prodrugs crossed the BBB carrier mediatedly via LAT1 in in situ rat brain perfusion. For the first time, we introduced a novel meta-substituted phenylalanine analogue promoiety which improved the LAT1 affinity 10-fold and more importantly the rat brain uptake of the prodrug 2-fold compared with those of the para-substituted derivatives. Therefore, we have characterized a new prodrug design idea for CNS drug delivery utilizing a transporter-mediated prodrug approach.

  17. ATel 7545: Fermi LAT Detection of a GeV flare from spectrally hard FSRQ S4 1800+44

    NASA Astrophysics Data System (ADS)

    Buson, S.; Fermi LAT Collaboration

    2015-05-01

    The Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, has observed increasing gamma-ray flux and an unusually hard gamma-ray spectrum from a source positionally consistent with the flat spectrum radio quasar (FSRQ) S4 1800+44 (also known as 3FGL J1801.5+4403, Acero et al. ...

  18. Fermi-LAT detection of hard spectrum gamma-ray activity from the FSRQ PKS 1532+01

    NASA Astrophysics Data System (ADS)

    Ciprini, S.; Cheung, C. C.

    2015-03-01

    The Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, has observed increasing gamma-ray flux and an unusually hard gamma-ray spectrum from a source positionally consistent with the flat spectrum radio quasar (FSRQ) PKS 1532+01 (also known as 3FGL J1534.5+0128, Acero et al.

  19. 50 CFR Table 1c to Part 660... - Sablefish North of 36° N. lat. Allocations, 2013

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 13 2014-10-01 2014-10-01 false Sablefish North of 36° N. lat. Allocations, 2013 1c Table 1c to Part 660, Subpart C Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE (CONTINUED) FISHERIES...

  20. 50 CFR Table 2c to Part 660... - Sablefish North of 36° N. lat. Allocations, 2014 and Beyond

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 13 2014-10-01 2014-10-01 false Sablefish North of 36° N. lat. Allocations, 2014 and Beyond 2c Table 2c to Part 660, Subpart C Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE...

  1. EIGHT {gamma}-RAY PULSARS DISCOVERED IN BLIND FREQUENCY SEARCHES OF FERMI LAT DATA

    SciTech Connect

    Saz Parkinson, P. M.; Dormody, M.; Ziegler, M.; Belfiore, A.; Johnson, R. P.; Ray, P. S.; Abdo, A. A.; Grove, J. E.; Gwon, C.; Ballet, J.; Burnett, T. H.; Caliandro, G. A.; Camilo, F.; Caraveo, P. A.; De Luca, A.; Ferrara, E. C.; Harding, A. K.; Johnson, T. J.; Freire, P. C. C. E-mail: mdormody@ucsc.ed E-mail: Paul.Ray@nrl.navy.mi

    2010-12-10

    We report the discovery of eight {gamma}-ray pulsars in blind frequency searches of {approx}650 source positions using the Large Area Telescope (LAT), on board the Fermi Gamma-ray Space Telescope. We present the timing models, light curves, and detailed spectral parameters of the new pulsars. PSRs J1023-5746, J1044-5737, J1413-5205, J1429-5911, and J1954+2836 are young ({tau}{sub c} < 100 kyr), energetic (E-dot {approx}>10{sup 36} erg s{sup -1}), and located within the Galactic plane (|b| < 3{sup 0}). The remaining three pulsars, PSRs J1846+0919, J1957+5033, and J2055+25, are less energetic, and located off the plane. Five pulsars are associated with sources included in the Fermi-LAT bright {gamma}-ray source list, but only one, PSR J1413-6205, is clearly associated with an EGRET source. PSR J1023-5746 has the smallest characteristic age ({tau}{sub c} = 4.6 kyr) and is the most energetic (E-dot = 1.1x10{sup 37} erg s{sup -1}) of all {gamma}-ray pulsars discovered so far in blind searches. By analyzing >100 ks of publicly available archival Chandra X-ray data, we have identified the likely counterpart of PSR J1023-5746 as a faint, highly absorbed source, CXOU J102302.8-574606. The large X-ray absorption indicates that this could be among the most distant {gamma}-ray pulsars detected so far. PSR J1023-5746 is positionally coincident with the TeV source HESS J1023-575, located near the young stellar cluster Westerlund 2, while PSR J1954+2836 is coincident with a 4.3{sigma} excess reported by Milagro at a median energy of 35 TeV. PSRs J1957+5033 and J2055+25 have the largest characteristic ages ({tau}{sub c} {approx} 1 Myr) and are the least energetic (E-dot {approx}5x10{sup 33} erg s{sup -1}) of the newly discovered pulsars. We used recent XMM observations to identify the counterpart of PSR J2055+25 as XMMU J205549.4+253959. Deep radio follow-up observations of the eight pulsars resulted in no detections of pulsations and upper limits comparable to the faintest known

  2. miR-21 modulates resistance of HR-HPV positive cervical cancer cells to radiation through targeting LATS1

    SciTech Connect

    Liu, Shikai; Song, Lili Zhang, Liang; Zeng, Saitian; Gao, Fangyuan

    2015-04-17

    Although multiple miRNAs are found involved in radioresistance development in HR-HPV positive (+) cervical cancer, only limited studies explored the regulative mechanism of the miRNAs. miR-21 is one of the miRNAs significantly upregulated in HR-HPV (+) cervical cancer is also significantly associated with radioresistance. However, the detailed regulative network of miR-21 in radioresistance is still not clear. In this study, we confirmed that miR-21 overexpression was associated with higher level of radioresistance in HR-HPV (+) cervical cancer patients and thus decided to further explore its role. Findings of this study found miR-21 can negatively affect radiosensitivity of HR-HPV (+) cervical cancer cells and decrease radiation induced G2/M block and increase S phase accumulation. By using dual luciferase assay, we verified a binding site between miR-21 and 3′-UTR of large tumor suppressor kinase 1 (LATS1). Through direct binding, miR-21 can regulate LATS1 expression in cervical cancer cells. LATS1 overexpression can reverse miR-21 induced higher colony formation rate and also reduced miR-21 induced S phase accumulation and G2/M phase block reduction under radiation treatment. These results suggested that miR-21-LATS1 axis plays an important role in regulating radiosensitivity. - Highlights: • miR-21 is highly expressed in HR-HPV (+) radioresistant cervical cancer patients. • miR-21 can negatively affect radiosensitivity of HR-HPV (+) cervical cancer cells. • miR-21 can decrease radiation induced G2/M block and increase S phase accumulation. • miR-21 modulates radiosensitivity cervical cancer cell by directly targeting LATS1.

  3. Agglutinating mouse IgG3 compares favourably with IgMs in typing of the blood group B antigen: Functionality and stability studies

    PubMed Central

    Klaus, Tomasz; Bzowska, Monika; Kulesza, Małgorzata; Kabat, Agnieszka Martyna; Jemioła-Rzemińska, Małgorzata; Czaplicki, Dominik; Makuch, Krzysztof; Jucha, Jarosław; Karabasz, Alicja; Bereta, Joanna

    2016-01-01

    Mouse immunoglobulins M (IgMs) that recognize human blood group antigens induce haemagglutination and are used worldwide for diagnostic blood typing. Contrary to the current belief that IgGs are too small to simultaneously bind antigens on two different erythrocytes, we obtained agglutinating mouse IgG3 that recognized antigen B of the human ABO blood group system. Mouse IgG3 is an intriguing isotype that has the ability to form Fc-dependent oligomers. However, F(ab′)2 fragments of the IgG3 were sufficient to agglutinate type B red blood cells; therefore, IgG3-triggered agglutination did not require oligomerization. Molecular modelling indicated that mouse IgG3 has a larger range of Fab arms than other mouse IgG subclasses and that the unique properties of mouse IgG3 are likely due to the structure of its hinge region. With a focus on applications in diagnostics, we compared the stability of IgG3 and two IgMs in formulated blood typing reagents using an accelerated storage approach and differential scanning calorimetry. IgG3 was much more stable than IgMs. Interestingly, the rapid decrease in IgM activity was caused by aggregation of the molecules and a previously unknown posttranslational proteolytic processing of the μ heavy chain. Our data point to mouse IgG3 as a potent diagnostic tool. PMID:27484487

  4. Lab-on-a-disc agglutination assay for protein detection by optomagnetic readout and optical imaging using nano- and micro-sized magnetic beads.

    PubMed

    Uddin, Rokon; Burger, Robert; Donolato, Marco; Fock, Jeppe; Creagh, Michael; Hansen, Mikkel Fougt; Boisen, Anja

    2016-11-15

    We present a biosensing platform for the detection of proteins based on agglutination of aptamer coated magnetic nano- or microbeads. The assay, from sample to answer, is integrated on an automated, low-cost microfluidic disc platform. This ensures fast and reliable results due to a minimum of manual steps involved. The detection of the target protein was achieved in two ways: (1) optomagnetic readout using magnetic nanobeads (MNBs); (2) optical imaging using magnetic microbeads (MMBs). The optomagnetic readout of agglutination is based on optical measurement of the dynamics of MNB aggregates whereas the imaging method is based on direct visualization and quantification of the average size of MMB aggregates. By enhancing magnetic particle agglutination via application of strong magnetic field pulses, we obtained identical limits of detection of 25pM with the same sample-to-answer time (15min 30s) using the two differently sized beads for the two detection methods. In both cases a sample volume of only 10µl is required. The demonstrated automation, low sample-to-answer time and portability of both detection instruments as well as integration of the assay on a low-cost disc are important steps for the implementation of these as portable tools in an out-of-lab setting.

  5. Agglutinating mouse IgG3 compares favourably with IgMs in typing of the blood group B antigen: Functionality and stability studies.

    PubMed

    Klaus, Tomasz; Bzowska, Monika; Kulesza, Małgorzata; Kabat, Agnieszka Martyna; Jemioła-Rzemińska, Małgorzata; Czaplicki, Dominik; Makuch, Krzysztof; Jucha, Jarosław; Karabasz, Alicja; Bereta, Joanna

    2016-08-03

    Mouse immunoglobulins M (IgMs) that recognize human blood group antigens induce haemagglutination and are used worldwide for diagnostic blood typing. Contrary to the current belief that IgGs are too small to simultaneously bind antigens on two different erythrocytes, we obtained agglutinating mouse IgG3 that recognized antigen B of the human ABO blood group system. Mouse IgG3 is an intriguing isotype that has the ability to form Fc-dependent oligomers. However, F(ab')2 fragments of the IgG3 were sufficient to agglutinate type B red blood cells; therefore, IgG3-triggered agglutination did not require oligomerization. Molecular modelling indicated that mouse IgG3 has a larger range of Fab arms than other mouse IgG subclasses and that the unique properties of mouse IgG3 are likely due to the structure of its hinge region. With a focus on applications in diagnostics, we compared the stability of IgG3 and two IgMs in formulated blood typing reagents using an accelerated storage approach and differential scanning calorimetry. IgG3 was much more stable than IgMs. Interestingly, the rapid decrease in IgM activity was caused by aggregation of the molecules and a previously unknown posttranslational proteolytic processing of the μ heavy chain. Our data point to mouse IgG3 as a potent diagnostic tool.

  6. MicroRNA-373 (miR-373) post-transcriptionally regulates large tumor suppressor, homolog 2 (LATS2) and stimulates proliferation in human esophageal cancer

    SciTech Connect

    Lee, Kuen-Haur; Goan, Yih-Gang; Hsiao, Michael; Lee, Chien-Hsing; Jian, Shu-Huei; Lin, Jen-Tai; Chen, Yuh-Ling; Lu, Pei-Jung

    2009-09-10

    LATS2 is a member of the LATS tumor suppressor family. It has been implicated in regulation of the cell cycle and apoptosis. Frequent loss of heterozygosity (LOH) of LATS2 has been reported in human esophageal cancer. But, the LATS2 gene expression and its regulatory mechanism in esophageal cancer remain unclear. The present study has shown that LATS2 protein expression was mediated by miR-373 at the post-transcriptional level and inversely correlated with miR-373 amounts in esophageal cancer cell lines. Furthermore, we demonstrated that the direct inhibition of LATS2 protein was mediated by miR-373 and manipulated the expression of miR-373 to affect esophageal cancer cells growth. Moreover, this correlation was supported by data collected ex vivo, in which esophageal cancer tissues from esophageal squamous cell carcinoma (ESCC) patients were analyzed. Finally, by miRNA microarray analysis, four miRNAs including miR-373 were over-expressed in ESCC samples. Our findings reveal that miR-373 would be a potential oncogene and it participates in the carcinogenesis of human esophageal cancer by suppressing LATS2 expression.

  7. Extending the Fermi-LAT data processing pipeline to the grid

    SciTech Connect

    Zimmer, S.; Arrabito, L.; Glanzman, T.; Johnson, T.; Lavalley, C.; Tsaregorodtsev, A.

    2015-05-12

    The Data Handling Pipeline ("Pipeline") has been developed for the Fermi Gamma-Ray Space Telescope (Fermi) Large Area Telescope (LAT) which launched in June 2008. Since then it has been in use to completely automate the production of data quality monitoring quantities, reconstruction and routine analysis of all data received from the satellite and to deliver science products to the collaboration and the Fermi Science Support Center. Aside from the reconstruction of raw data from the satellite (Level 1), data reprocessing and various event-level analyses are also reasonably heavy loads on the pipeline and computing resources. These other loads, unlike Level 1, can run continuously for weeks or months at a time. Additionally, it receives heavy use in performing production Monte Carlo tasks.

  8. Constraining Inert Triplet dark matter by the LHC and FermiLAT

    SciTech Connect

    Ayazi, Seyed Yaser; Firouzabadi, S. Mahdi E-mail: smmfirouz@yahoo.com

    2014-11-01

    We study collider phenomenology of inert triplet scalar dark matter at the LHC. We discuss possible decay of Higgs boson to dark matter candidate and apply current experimental data for invisible Higgs decay and R{sub γγ} to constrain parameter space of our model. We also investigate constraints on dark matter coming from forthcoming measurement, R{sub Zγ} and mono-Higgs production. We analytically calculate the annihilation cross section of dark matter candidate into 2γ and Zγ and then use FermiLAT data to put constraints on parameter space of Inert Triplet Model. We found that this limit can be stronger than the constraints provided by LUX experiment for low mass DM.

  9. Fermi-LAT and Suzaku Observations of the Radio Galaxy Centaurus B

    SciTech Connect

    Katsuta, Junichiro; Tanaka, Y.T.; Stawarz, L.; O'Sullivan, S.P.; Cheung, C.C.; Kataoka, J.; Funk, S.; Yuasa, T.; Odaka, H.; Takahashi, T.; Svoboda, J.; /European Space Agency

    2012-08-17

    CentaurusB is a nearby radio galaxy positioned in the Southern hemisphere close to the Galactic plane. Here we present a detailed analysis of about 43 months accumulation of Fermi-LAT data and of newly acquired Suzaku X-ray data for Centaurus B. The source is detected at GeV photon energies, although we cannot completely exclude the possibility that it is an artifact due to incorrect modeling of the bright Galactic diffuse emission in the region. The LAT image provides a weak hint of a spatial extension of the {gamma} rays along the radio lobes, which is consistent with the lack of source variability in the GeV range. We note that the extension cannot be established statistically due to the low number of the photons. Surprisingly, we do not detect any diffuse emission of the lobes at X-ray frequencies, with the provided upper limit only marginally consistent with the previously claimed ASCA flux. The broad-band modeling shows that the observed {gamma}-ray flux of the source may be produced within the lobes, if the diffuse non-thermal X-ray emission component is not significantly below the derived Suzaku upper limit. This association would imply that efficient in-situ acceleration of the ultrarelativistic particles is occurring and that the lobes are dominated by the pressure from the relativistic particles. However, if the diffuse X-ray emission is much below the Suzaku upper limits, the observed {gamma}-ray flux is not likely to be produced within the lobes, but instead within the unresolved core of Centaurus B. In this case, the extended lobes could be dominated by the pressure of the magnetic field.

  10. VizieR Online Data Catalog: Refined associations of Fermi/LAT sources (Massaro+, 2015)

    NASA Astrophysics Data System (ADS)

    Massaro, F.; D'Abrusco, R.; Landoni, M.; Paggi, A.; Masetti, N.; Giroletti, M.; Oti-Floranes, H.; Chavushyan, V.; Jimenez-Bailon, E.; Patino-Alvarez, V.; Digel, S. W.; Smith, H. A.; Tosti, G.

    2015-04-01

    The Fermi-Large Area Telescope (LAT) First Source Catalog (1FGL) was released in 2010 February and the Fermi-LAT 2-Year Source Catalog (2FGL) appeared in 2012 April, based on data from 24 months of operation. Since they were released, many follow up observations of unidentified γ-ray sources have been performed and new procedures for associating γ-ray sources with potential counterparts at other wavelengths have been developed. Here we review and characterize all of the associations as published in the 1FGL and 2FGL catalogs on the basis of multifrequency archival observations. In particular, we located 177 spectra for the low-energy counterparts that were not listed in the previous Fermi catalogs, and in addition we present new spectroscopic observations of eight γ-ray blazar candidates. Based on our investigations, we introduce a new counterpart category of "candidate associations" and propose a refined classification for the candidate low-energy counterparts of the Fermi sources. We compare the 1FGL-assigned counterparts with those listed in 2FGL to determine which unassociated sources became associated in later releases of the Fermi catalogs. We also search for potential counterparts to all of the remaining unassociated Fermi sources. Finally, we prepare a refined and merged list of all of the associations of 1FGL plus 2FGL that includes 2219 unique Fermi objects. This is the most comprehensive and systematic study of all the associations collected for the γ-ray sources available to date. We conclude that 80% of the Fermi sources have at least one known plausible γ-ray emitter within their positional uncertainty regions. (2 data files).

  11. Searching for Dark Matter Annihilation in Recently Discovered Milky Way Satellites with Fermi-Lat

    NASA Astrophysics Data System (ADS)

    Albert, A.; Anderson, B.; Bechtol, K.; Drlica-Wagner, A.; Meyer, M.; Sánchez-Conde, M.; Strigari, L.; Wood, M.; Abbott, T. M. C.; Abdalla, F. B.; Benoit-Lévy, A.; Bernstein, G. M.; Bernstein, R. A.; Bertin, E.; Brooks, D.; Burke, D. L.; Carnero Rosell, A.; Carrasco Kind, M.; Carretero, J.; Crocce, M.; Cunha, C. E.; D’Andrea, C. B.; da Costa, L. N.; Desai, S.; Diehl, H. T.; Dietrich, J. P.; Doel, P.; Eifler, T. F.; Evrard, A. E.; Fausti Neto, A.; Finley, D. A.; Flaugher, B.; Fosalba, P.; Frieman, J.; Gerdes, D. W.; Goldstein, D. A.; Gruen, D.; Gruendl, R. A.; Honscheid, K.; James, D. J.; Kent, S.; Kuehn, K.; Kuropatkin, N.; Lahav, O.; Li, T. S.; Maia, M. A. G.; March, M.; Marshall, J. L.; Martini, P.; Miller, C. J.; Miquel, R.; Neilsen, E.; Nord, B.; Ogando, R.; Plazas, A. A.; Reil, K.; Romer, A. K.; Rykoff, E. S.; Sanchez, E.; Santiago, B.; Schubnell, M.; Sevilla-Noarbe, I.; Smith, R. C.; Soares-Santos, M.; Sobreira, F.; Suchyta, E.; Swanson, M. E. C.; Tarle, G.; Vikram, V.; Walker, A. R.; Wechsler, R. H.; Fermi-LAT Collaboration; DES Collaboration

    2017-01-01

    We search for excess γ-ray emission coincident with the positions of confirmed and candidate Milky Way satellite galaxies using six years of data from the Fermi Large Area Telescope (LAT). Our sample of 45 stellar systems includes 28 kinematically confirmed dark-matter-dominated dwarf spheroidal galaxies (dSphs) and 17 recently discovered systems that have photometric characteristics consistent with the population of known dSphs. For each of these targets, the relative predicted γ-ray flux due to dark matter annihilation is taken from kinematic analysis if available, and estimated from a distance-based scaling relation otherwise, assuming that the stellar systems are DM-dominated dSphs. LAT data coincident with four of the newly discovered targets show a slight preference (each ∼ 2σ local) for γ-ray emission in excess of the background. However, the ensemble of derived γ-ray flux upper limits for individual targets is consistent with the expectation from analyzing random blank-sky regions, and a combined analysis of the population of stellar systems yields no globally significant excess (global significance < 1σ ). Our analysis has increased sensitivity compared to the analysis of 15 confirmed dSphs by Ackermann et al. The observed constraints on the DM annihilation cross section are statistically consistent with the background expectation, improving by a factor of ∼2 for large DM masses ({m}{DM,b\\bar{b}}≳ 1 {TeV} and {m}{DM,{τ }+{τ }-}≳ 70 {GeV}) and weakening by a factor of ∼1.5 at lower masses relative to previously observed limits.

  12. A new treatment for human malignant melanoma targeting L-type amino acid transporter 1 (LAT1): A pilot study in a canine model

    SciTech Connect

    Fukumoto, Shinya; Hanazono, Kiwamu; Fu, Dah-Renn; Endo, Yoshifumi; Kadosawa, Tsuyoshi; Iwano, Hidetomo; Uchide, Tsuyoshi

    2013-09-13

    Highlights: •LAT1 is highly expressed in tumors but at low levels in normal tissues. •We examine LAT1 expression and function in malignant melanoma (MM). •LAT1 expression in MM tissues and cell lines is higher than those in normal tissues. •LAT1 selective inhibitors inhibit amino acid uptake and cell growth in MM cells. •New chemotherapeutic protocols including LAT1 inhibitors are effective for treatment. -- Abstract: L-type amino acid transporter 1 (LAT1), an isoform of amino acid transport system L, transports branched or aromatic amino acids essential for fundamental cellular activities such as cellular growth, proliferation and maintenance. This amino acid transporter recently has received attention because of its preferential and up-regulated expression in a variety of human tumors in contrast to its limited distribution and low-level expression in normal tissues. In this study, we explored the feasibility of using LAT1 inhibitor as a new therapeutic agent for human malignant melanomas (MM) using canine spontaneous MM as a model for human MM. A comparative study of LAT expression was performed in 48 normal tissues, 25 MM tissues and five cell lines established from MM. The study observed LAT1 mRNA levels from MM tissues and cell lines that were significantly (P < 0.01) higher than in normal tissues. Additionally, MM with distant metastasis showed a higher expression than those without distant metastasis. Functional analysis of LAT1 was performed on one of the five cell lines, CMeC-1. [{sup 3}H]L-Leucine uptake and cellular growth activities in CMeC-1 were inhibited in a dose-dependent manner by selective LAT1 inhibitors (2-amino-2-norbornane-carboxylic acid, BCH and melphalan, LPM). Inhibitory growth activities of various conventional anti-cancer drugs, including carboplatin, cyclophosphamide, dacarbazine, doxorubicin, mitoxantrone, nimustine, vinblastine and vincristine, were significantly (P < 0.05) enhanced by combination use with BCH or LPM

  13. Introducing point mutations into the ATGs of the putative open reading frames of the HSV-1 gene encoding the latency associated transcript (LAT) reduces its anti-apoptosis activity.

    PubMed

    Carpenter, Dale; Henderson, Gail; Hsiang, Chinhui; Osorio, Nelson; BenMohamed, Lbachir; Jones, Clinton; Wechsler, Steven L

    2008-02-01

    The herpes simplex virus type 1 (HSV-1) latency associated transcript (LAT) gene has anti-apoptosis activity that directly or indirectly enhances the virus's reactivation phenotype in small animal models. The first 1.5 kb of the primary 8.3 kb LAT is sufficient and some or all of it is necessary for LAT's anti-apoptosis in transient transfection assays and for LAT's ability to enhance the reactivation phenotype. Based on LAT's genomic sequence, the first 1.5 kb contains eight potential open reading frames (ORFs) defined as an ATG followed by an in frame termination codon. In this study, point mutations were introduced into the ATGs of ORFs present in the 1.5 kb fragment of LAT. Mutagenesis of all eight ATGs in LAT ORFs consistently reduced the anti-apoptotic activity of LAT in transiently transfected mouse neuroblastoma cells regardless of whether apoptosis was induced by caspase 8 or caspase 9. Mutation of the six ATGs located in the stable intron sequences within the 1.5 kb LAT had a dramatic effect on caspase 9, but not caspase 8, induced apoptosis. For both caspase 8 and caspase 9 induced apoptosis, mutating the two ATGs in the exon of the LAT 1.5 kb fragment reduced, but did not eliminate the anti-apoptotic activity of LAT. These studies suggest that altering the fine structure of regulatory RNA or expression of a putative LAT ORF regulates the anti-apoptosis activity of LAT. These studies also indicate that more than one function is present in the 1.5 kb LAT fragment.

  14. Buffered Plate Antigen Test as a Screening Test for Diagnosis of Human Brucellosis

    PubMed Central

    Lucero, Nidia E.; Bolpe, Jorge E.

    1998-01-01

    Brucellosis in Argentina is currently investigated in bank donor blood by the standard plate agglutination test (PAT). This study evaluated the buffered plate antigen test (BPA), now used to screen for bovine brucellosis, as a screen for human disease. Of 57 sera from patients with culture-confirmed brucellosis, 100% were detected with the BPA. Of 142 sera positive by rose bengal (RB) and complement fixation (CF), from patients with clinical evidence of brucellosis, the BPA detected 100%. Of 307 sera from a nonsymptomatic population that were RB and CF negative, the BPA detected 99.67% of the negative sera. The data indicate that the BPA is satisfactory compared to the other agglutination tests employed. It is an inexpensive and practical screening test and reduces the nonspecific reactions detected by the PAT. PMID:9574720

  15. Comparison of Total and IgG ABO Antibody Titers in Healthy Individuals by Using Tube and Column Agglutination Techniques

    PubMed Central

    Park, Eun Su; Jo, Kyung Il; Park, Rojin; Choi, Tae Yoon; Bang, Hae In; Chai, Gum Ran; Yun, Soon Gyu

    2014-01-01

    Background Most immune reactions related to transfusion and transplantation are caused by IgM ABO antibodies. However, IgG also plays an important role in these reactions. Therefore, a method to measure antibodies, including IgG, is necessary. We investigated ABO antibody titers of healthy individuals using a column agglutination technique (CAT) with or without dithiothreitol (DTT) and compared them with titers obtained using a conventional tube method. Methods Among healthy adults who underwent a medical examination, 180 individuals (60 with blood group A, 60 with group B, and 60 with group O) were selected. Antibody titrations were performed using the immediate spin (IS) tube, anti-human globulin (AHG) tube, and CAT with or without DTT methods. Results Higher median values of anti-B and anti-A titers in groups A and B individuals, respectively, were obtained using the IS method than using the AHG method. Higher values for group O individuals were obtained using the AHG method. Higher median titers of anti-B and anti-A in group O individuals were obtained using CAT without DTT than using the AHG method. Median titers of anti-B and anti-A in all blood groups were higher in CAT without DTT than in CAT with DTT, especially for group O individuals. Conclusions We recommend CAT with and without DTT for titration of anti-A and anti-B, especially in group O individuals, to provide more sensitive results that include IgG data. Adjustment of insurance coverage of fees associated with antibody titration might be necessary, considering the actual cost of reagents and personnel. PMID:24790910

  16. LAT Region Factors Mediating Differential Neuronal Tropism of HSV-1 and HSV-2 Do Not Act in Trans

    PubMed Central

    Bertke, Andrea S.; Apakupakul, Kathleen; Ma, AyeAye; Imai, Yumi; Gussow, Anne M.; Wang, Kening; Cohen, Jeffrey I.; Bloom, David C.; Margolis, Todd P.

    2012-01-01

    After HSV infection, some trigeminal ganglion neurons support productive cycle gene expression, while in other neurons the virus establishes a latent infection. We previously demonstrated that HSV-1 and HSV-2 preferentially establish latent infection in A5+ and KH10+ sensory neurons, respectively, and that exchanging the latency-associated transcript (LAT) between HSV-1 and HSV-2 also exchanges the neuronal preference. Since many viral genes besides the LAT are functionally interchangeable between HSV-1 and HSV-2, we co-infected HSV-1 and HSV-2, both in vivo and in vitro, to determine if trans-acting viral factors regulate whether HSV infection follows a productive or latent pattern of gene expression in sensory neurons. The pattern of HSV-1 and HSV-2 latent infection in trigeminal neurons was no different following co-infection than with either virus alone, consistent with the hypothesis that a trans-acting viral factor is not responsible for the different patterns of latent infection of HSV-1 and HSV-2 in A5+ and KH10+ neurons. Since exchanging the LAT regions between the viruses also exchanges neuronal preferences, we infected transgenic mice that constitutively express 2.8 kb of the LAT region with the heterologous viral serotype. Endogenous expression of LAT did not alter the pattern of latent infection after inoculation with the heterologous serotype virus, demonstrating that the LAT region does not act in trans to direct preferential establishment of latency of HSV-1 and HSV-2. Using HSV1-RFP and HSV2-GFP in adult trigeminal ganglion neurons in vitro, we determined that HSV-1 and HSV-2 do not exert trans-acting effects during acute infection to regulate neuron specificity. Although some neurons were productively infected with both HSV-1 and HSV-2, no A5+ or KH10+ neurons were productively infected with both viruses. Thus, trans-acting viral factors do not regulate preferential permissiveness of A5+ and KH10+ neurons for productive HSV infection and

  17. Onset and Rapid Increase of Gamma-Ray activity from the Binary System PSR B1259-63 detected by Fermi LAT

    NASA Astrophysics Data System (ADS)

    Wood, K. S.; Caliandro, G. A.; Cheung, C. C.; Li, J.; Torres, D. F.; Fermi LAT Collaboration

    2014-06-01

    The Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, is measuring rapid brightening of the binary system PSR B1259-63/SS 2883 in the GeV energy range. ...

  18. Low level of LAT-PLC-γ1 interaction is associated with Th2 polarized differentiation: a contributing factor to the etiology of asthma.

    PubMed

    Peng, Xiaohua; Cui, Zhilei; Gu, Wen; Xu, Weiguo; Guo, Xuejun

    2014-07-01

    Linker for activation of T cells (LAT) is a key adaptor in the T cell receptor (TCR) signaling pathway. The expression of LAT is lower in asthmatic patients than that in healthy people, but there is little knowledge about the mechanism underlying this phenomenon. This study was aimed to determine whether LAT-PLC-γ1 interaction was involved in the development of asthma. It was shown that the phosphorylation of PLC-γ1 decreased in the asthmatic mouse model and Th2 cell differentiated CD4(+) T cells. In addition, depleted endogenous PLC-γ1 promoted CD4(+) T cells to differentiate into IL-4-Productor. It was therefore concluded that the low level of LAT-PLC-γ1 interaction was associated with Th2 polarized differentiation, and this may contribute to the etiology of asthma.

  19. Searching for γ-ray signature in WHSP blazars. Fermi-LAT detection of 150 excess signal in the 0.3-500 GeV band

    NASA Astrophysics Data System (ADS)

    Arsioli, B.; Chang, Y.-L.

    2017-02-01

    Aims: A direct search of γ-ray emission centered on multifrequency selected candidates is a valuable complementary approach to the standard search adopted in current γ-ray Fermi-LAT catalogs. Our sources are part of the 2WHSP sample that was assembled with the aim of providing targets for Imaging Atmospheric Cherenkov Telescopes (IACT). A likelihood analysis based on their known position enabled us to detect 150 γ-ray excess signals that have not yet been reported in previous γ-ray catalogs (1FGL, 2FGL, 3FGL). By identifying new sources, we solve a fraction of the extragalactic isotropic γ-ray background (IGRB) composition, improving the description of the γ-ray sky. Methods: We perform data reduction with the Fermi Science Tools using positions from 400 high synchrotron peaked (HSP) blazars as seeds of tentative γ-ray sources; none of them have counterparts from previous 1FGL, 2FGL and 3FGL catalogs. Our candidates are part of the 2WHSP sample (currently the largest set of HSP blazars). We focus on HSPs characterized by bright synchrotron component with peak flux νf(ν) ≥ 10-12.1 erg/cm2/s, testing the hypothesis of having a γ-ray source in correspondence to the WHSP positions. Our likelihood analysis considers the 0.3-500 GeV energy band, integrating over 7.2 yr of Fermi-LAT observation and making use of the Pass 8 data release. Results: From the 400 candidates tested, a total of 150 2WHSPs showed excess γ-ray signature: 85 high-significance detections with test statistic (TS) > 25, and 65 lower-significance detections with TS between 10 to 25. We assume a power law spectrum in the 0.3-500 GeV band and list the spectrum parameters describing all 150 new γ-ray sources. We study the γ-ray photon spectral index distribution, the likelihood of detection according to the synchrotron peak brightness (figure of merit parameter), and plot the measured γ-ray LogN-LogS of HSP blazars, also discussing the portion of the IGRB that has been resolved by the

  20. The Half-Life of the HSV-1 1.5 kb LAT Intron is similar to the half-Life of the 2.0 kb LAT Intron

    PubMed Central

    Brinkman, Kerry K.; Mishra, Prakhar; Fraser, Nigel W.

    2013-01-01

    Herpes Simplex Virus type 1 (HSV-1) establishes a latent infection in the sensory neurons of the peripheral nervous system of humans. Although about 80 genes are expressed during the lytic cycle of the virus infection, essentially only one gene is expressed during the latent cycle. This gene is known as the latency associated transcript (LAT) and it appears to play a role in the latency cycle through an anti-apoptotic function in the 5’ end of the gene and miRNA encoded along the length of the transcript which down regulate some of the viral immediate early (IE) gene products. The LAT gene is about 8.3 kb long and consists of two exons separated by an unusual intron. The intron between the exons consists of two nested introns. This arrangement of introns has been called a twintron. Furthermore, the larger (2 kb) intron has been shown to be very stable. In this study we measure the stability of the shorter 1.5 kb nested intron and find its half-life is similar to the longer intron. This was achieved by deleting the 0.5 kb overlapping intron from a plasmid construct designed to express the LAT transcript from a tet-inducible promoter, and measuring the half-life of the 1.5 kb intron in tissue culture cells. This finding supports the hypothesis that it is the common branch-point region of these nested introns that is responsible for their stability. PMID:23335177

  1. The half-life of the HSV-1 1.5-kb LAT intron is similar to the half-life of the 2.0-kb LAT intron.

    PubMed

    Brinkman, Kerry K; Mishra, Prakhar; Fraser, Nigel W

    2013-02-01

    Herpes simplex virus type 1 establishes a latent infection in the sensory neurons of the peripheral nervous system of humans. Although about 80 genes are expressed during the lytic cycle of the virus infection, essentially only one gene is expressed during the latent cycle. This gene is known as the latency-associated transcript (LAT), and it appears to play a role in the latency cycle through an anti-apoptotic function in the 5' end of the gene and miRNA encoded along the length of the transcript which downregulate some of the viral immediate-early gene products. The LAT gene is about 8.3 kb long and consists of two exons separated by an unusual intron. The intron between the exons consists of two nested introns. This arrangement of introns has been called a twintron. Furthermore, the larger (2 kb) intron has been shown to be very stable. In this study, we measure the stability of the shorter 1.5-kb nested intron and find its half-life is similar to the longer intron. This was achieved by deleting the 0.5-kb overlapping intron from a plasmid construct designed to express the LAT transcript from a tet-inducible promoter and measuring the half-life of the 1.5-kb intron in tissue culture cells. This finding supports the hypothesis that it is the common branch-point region of these nested introns that is responsible for their stability.

  2. Transferable cefoxitin resistance in enterobacteria from Greek hospitals and characterization of a plasmid-mediated group 1 beta-lactamase (LAT-2).

    PubMed Central

    Gazouli, M; Tzouvelekis, L S; Prinarakis, E; Miriagou, V; Tzelepi, E

    1996-01-01

    Cefoxitin resistance in Klebsiella pneumoniae from Escherichia coli strains isolated in Greek hospitals was found to be due to the acquisition of similar plasmids coding for group 1 beta-lactamases. The plasmids were not self-transferable but were mobilized by conjugative plasmids. These elements have also been spread to Enterobacter aerogenes. The most common enzyme was a Citrobacter freundii-derived cephalosporinase (LAT-2) which differed from LAT-1 by three amino acids. PMID:8807075

  3. 50 CFR Table 3 (south) to Part 660... - 2010 Trip Limits for Open Access Gears South of 40°10′ N. Lat.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

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    Code of Federal Regulations, 2010 CFR

    2010-10-01

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    Code of Federal Regulations, 2010 CFR

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    Code of Federal Regulations, 2010 CFR

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  7. Analysis of the cumulative neutrino flux from Fermi LAT blazar populations using 3 years of IceCube data

    NASA Astrophysics Data System (ADS)

    Glüsenkamp, Thorsten

    2016-07-01

    The recent discovery of a diffuse neutrino flux up to PeV energies raises the question of which populations of astrophysical sources contribute to this diffuse signal. One extragalactic candidate source population to produce high-energy neutrinos are Blazars. We present results from a likelihood analysis searching for cumulative neutrino emission from Blazar populations selected with the 2nd Fermi LAT AGN catalogue (2LAC) using an IceCube data set that has been optimized for the detection of individual sources. In contrast to previous searches with IceCube, the investigated populations contain up to hundreds of sources, the biggest one being the entire Blazar sample measured by the Fermi-LAT. No significant neutrino signal was found from any of these populations. Some implications of this non-observation for the origin of the observed PeV diffuse signal will be discussed.

  8. Fermi LAT detection of a GeV flare from blazar NRAO 190 (PKS 0440-00)

    NASA Astrophysics Data System (ADS)

    Buson, S.; Gasparrini, D.

    2013-06-01

    The Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, observed a gamma-ray outburst from a source positionally consistent with the flat spectrum radio quasar NRAO 190 (also known as PKS 0440-00, DA 145, OF -067; RA: 04h 42m 38.661s, Dec: -00d 17m 43.42s, J2000.0) with redshift 0.844 (Hewitt & Burbidge 1987, 63, 1).

  9. Enhanced high-energy gamma-ray emission from the microquasar Cygnus X-3 detected by Fermi/LAT

    NASA Astrophysics Data System (ADS)

    Loh, Alan; Corbel, Stephane

    2017-02-01

    Following the recent decrease of the hard X-ray emission from the high-mass X-ray binary Cygnus X-3 as seen by the Swift/Burst Alert Telescope (https://swift.gsfc.nasa.gov/results/transients/CygX-3/), the Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, has observed significant gamma-ray emission originating from the microquasar.

  10. Fermi LAT detection of a GeV gamma-ray flare from the BL Lac object AP Librae

    NASA Astrophysics Data System (ADS)

    Ciprini, Stefano

    2016-08-01

    The Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, has observed increasing gamma-ray flux from a source positionally consistent with the BL Lac object AP Lib (also known as PKS 1514-24 and 3FGL J1517.6-2422), with radio counterpart position R.A.: 229.424221 deg, Dec.: -24.372076 deg, (J2000.0, Johnston et al. 1995, AJ, 110, 880).

  11. Fermi LAT Detection of a GeV Flare from the FSRQ S4 0954+65

    NASA Astrophysics Data System (ADS)

    Krauss, Felicia

    2014-11-01

    The Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, has observed increasing gamma-ray activity from a source positionally consistent with S4 0954+65 (RA: 149.696855, Dec: +65.565227, J2000, Johnston et al., 1995, AJ, 110, 880) at z = 0.368 (Wills et al., 1992, ApJ, 398, 454).

  12. Fermi LAT detection of renewed GeV activity from the high redshift blazar PKS 0458-02

    NASA Astrophysics Data System (ADS)

    Ciprini, Stefano; Fermi Large Area Telescope Collaboration

    2015-08-01

    The Large Area Telescope (LAT), one of two instruments on the Fermi Gamma-ray Space Telescope, has observed flaring gamma rays from a source positionally consistent with the flat spectrum radio quasar PKS 0458-02 (also known as S3 0458-02, DA 157, OA 141, and 3FGL J0501.2-0157), with radio coordinates, (J2000), R.A.: 75.303374 deg, Dec.: -1.987293 deg (Johnston et al.

  13. Fermi LAT detection of increasing gamma-ray activity from NGC 1275 and B3 0908+416B

    NASA Astrophysics Data System (ADS)

    Pivato, G.; Buson, S.

    2015-10-01

    The Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, has observed increasing gamma-ray flux from sources positionally consistent with the flat spectrum radio quasar B3 0908+416B (also known as 3FGL J0912.2+4126, Acero et al. 2015 ApJS, 218, 23) and the radio galaxy NGC 1275 (also known as Perseus A and 3FGL J0319.8+4130).

  14. Seven-year Collection of Well-monitored Fermi-LAT Gamma-Ray Burst Afterglows

    NASA Astrophysics Data System (ADS)

    Panaitescu, A.

    2017-03-01

    We present the light curves and spectra of 24 afterglows that have been monitored by Fermi-LAT at 0.1–100 GeV over more than a decade. All light curves (except 130427) are consistent with a single power law starting from their peaks, which occur in most cases before the burst end. The light curves display a brightness–decay rate correlation, with all but one (130427) of the bright afterglows decaying faster than the dimmer afterglows. We attribute this dichotomy to the quick deposition of relativistic ejecta energy in the external shock for the brighter/faster-decaying afterglows and to an extended energy injection in the afterglow shock for the dimmer/slower-decaying light curves. The spectra of six afterglows (090328, 100414, 110721, 110731, 130427, 140619B) indicate the existence of a harder component above a spectral dip or ankle at energies of 0.3–3 GeV, offering evidence for inverse-Compton emission at higher energies and suggesting that the harder power-law spectra of five other LAT afterglows (130327B, 131231, 150523, 150627, 160509) could also be inverse-Compton, while the remaining, softer LAT afterglows should be synchrotron emission. Marginal evidence for a spectral break and softening at higher energies is found for two afterglows (090902B and 090926).

  15. Gamma-Ray Observations of the Supernova Remnant RX J0852.0-4622 with the Fermi LAT

    SciTech Connect

    Tanaka, T.; Allafort, A.; Ballet, J.; Funk, S.; Giordano, F.; Hewitt, J.; Lemoine-Goumard, M.; Tajima, H.; Tibolla, O.; Uchiyama, Y.; /Stanford U., HEPL /KIPAC, Menlo Park

    2011-12-13

    We report on gamma-ray observations of the supernova remnant (SNR) RX J0852.0-4622 with the Large Area Telescope (LAT) aboard the Fermi Gamma-ray Space Telescope. In the Fermi LAT data, we find a spatially extended source at the location of the SNR. The extension is consistent with the SNR size seen in other wavelengths such as X-rays and TeV gamma rays, leading to the identification of the gamma-ray source with the SNR. The spectrum is well described as a power law with a photon index of {Lambda} = 1.85 {+-} 0.06 (stat){sub -0.19}{sup +0.18} (sys), which smoothly connects to the H.E.S.S. spectrum in the TeV energy band. We discuss the gamma-ray emission mechanism based on multiwavelength data. The broadband data can be fit well by a model in which the gamma rays are of hadronic origin. We also consider a scenario with inverse Compton scattering of electrons as the emission mechanism of the gamma rays. Although the leptonic model predicts a harder spectrum in the Fermi LAT energy range, the model can fit the data considering the statistical and systematic errors.

  16. Phosphotyrosine-mediated LAT assembly on membranes drives kinetic bifurcation in recruitment dynamics of the Ras activator SOS

    PubMed Central

    Huang, William Y. C.; Yan, Qingrong; Lin, Wan-Chen; Chung, Jean K.; Hansen, Scott D.; Christensen, Sune M.; Tu, Hsiung-Lin; Kuriyan, John; Groves, Jay T.

    2016-01-01

    The assembly of cell surface receptors with downstream signaling molecules is a commonly occurring theme in multiple signaling systems. However, little is known about how these assemblies modulate reaction kinetics and the ultimate propagation of signals. Here, we reconstitute phosphotyrosine-mediated assembly of extended linker for the activation of T cells (LAT):growth factor receptor-bound protein 2 (Grb2):Son of Sevenless (SOS) networks, derived from the T-cell receptor signaling system, on supported membranes. Single-molecule dwell time distributions reveal two, well-differentiated kinetic species for both Grb2 and SOS on the LAT assemblies. The majority fraction of membrane-recruited Grb2 and SOS both exhibit fast kinetics and single exponential dwell time distributions, with average dwell times of hundreds of milliseconds. The minor fraction exhibits much slower kinetics, extending the dwell times to tens of seconds. Considering this result in the context of the multistep process by which the Ras GEF (guanine nucleotide exchange factor) activity of SOS is activated indicates that kinetic stabilization from the LAT assembly may be important. This kinetic proofreading effect would additionally serve as a stochastic noise filter by reducing the relative probability of spontaneous SOS activation in the absence of receptor triggering. The generality of receptor-mediated assembly suggests that such effects may play a role in multiple receptor proximal signaling processes. PMID:27370798

  17. PTPN14 Forms a Complex with Kibra and LATS1 Proteins and Negatively Regulates the YAP Oncogenic Function*

    PubMed Central

    Wilson, Kayla E.; Li, Ying-Wei; Yang, Nuo; Shen, He; Orillion, Ashley R.; Zhang, Jianmin

    2014-01-01

    The Hippo signaling pathway regulates cellular proliferation and survival, thus exerting profound effects on normal cell fate and tumorigenesis. Pivotal effectors of this pathway are YAP/TAZ, transcriptional co-activators whose dysfunction contributes to epithelial-to-mesenchymal transition and malignant transformation. Therefore, it is of great importance to decipher the mechanisms underlying the regulations of YAP/TAZ at various levels. Here we report that non-receptor tyrosine phosphatase 14 (PTPN14) interacts with the Kibra protein. The interaction between PTPN14 and Kibra is through the PPXY domain of PTPN14 and WW domain of Kibra. PTPN14 and Kibra can induce the LATS1 activation independently and cooperatively. Interestingly, activation of LATS1 by PTPN14 is dependent on the C terminus of PTPN14 and independent of the upstream mammalian STE20-like kinase (MST) proteins. Furthermore, we demonstrate that PTPN14 increases the LAST1 protein stability. Last, overexpression of Kibra rescues the increased cell migration and aberrant three-dimensional morphogenesis induced by knockdown of PTPN14, and this rescue is mediated through the activation of the upstream LATS1 kinase and subsequent cytoplasmic sequestration of YAP. In summary, our results indicate a potential regulatory role of PTPN14 in the Hippo pathway and demonstrate another layer of regulation in the YAP oncogenic function. PMID:25023289

  18. Clustering of LAT light curves: a clue to the origin of high-energy emission in gamma-ray bursts

    NASA Astrophysics Data System (ADS)

    Nava, L.; Vianello, G.; Omodei, N.; Ghisellini, G.; Ghirlanda, G.; Celotti, A.; Longo, F.; Desiante, R.; Barniol Duran, R.

    2014-10-01

    The physical origin of the >0.1 GeV emission detected from gamma-ray bursts (GRBs) by the Fermi satellite has not yet been completely understood. In this work, we consider the GeV light curves of 10 GRBs with measured redshift detected by the Fermi Large Area Telescope (LAT). These light curves are characterized by a long-lived (≳102 seconds) emission, whose luminosity decays in time as a power law. While the decay rate is similar for all GRBs (i.e. LLAT ∝ t-1.2), the normalization spans about two orders of magnitude in luminosity. However, after re-normalizing the luminosities to the prompt energetics Eprompt the light curves overlap. We consider the scenario in which the temporally extended LAT emission is dominated by synchrotron radiation from electrons accelerated at the forward external shock. According to this model, at high energies (i.e. above the typical synchrotron frequencies) a small dispersion of the Eprompt-normalized light curves is expected. The fact that the LAT temporally extended emission follows this behaviour reinforces its interpretation in terms of afterglow radiation from external shocks. Assuming this scenario, we argue that the parameters ɛe and ηγ (i.e. the fraction of shock-dissipated energy gained by the electrons, and the efficiency of the mechanism producing the prompt radiation, respectively) must be narrowly distributed.

  19. Characterizing high-energy light curves of Fermi/LatGRBs - Oral Presentation

    SciTech Connect

    Gillette, Jarred

    2015-08-23

    A systematic analysis of the light curves of Gamma-Ray Burst (GRBs) with redshift and detected at high-energy (> 100 MeV) by Fermi/LAT has never been done before our work, because there were only a handful of detections. Now we have 20 of those, which we can use to characterize the GRBs in their rest frame. We compared a characteristic decay times Tc of GRBs with redshifts using the new "Pass8" data, and used a Crystal Ball function to parametrize GRB characteristics. An unexpected anti-correlation between Tc and the peak flux was observed. This means that brighter peaked GRBs have shorter durations. There is also no correlation between Tc and the decay index, which is one of the competing hypothesis on the origin of the high-energy emission. We did not observe any bimodality, which is seen in GRBs at lower energies.

  20. Characterizing high-energy light curves of Fermi/Lat GRBs

    SciTech Connect

    Gillette, Jarred

    2015-08-21

    A systematic analysis of the light curves of Gamma-Ray Burst (GRBs) with redshift and detected at high-energy (> 100 MeV) by Fermi/LAT has never been done before our work, because there were only a handful of detections. Now we have 20 of those, which we can use to characterize the GRBs in their rest frame. We compared a characteristic decay times Tc of GRBs with redshifts using the new “Pass 8” data, and used a Crystal Ball function to parametrize GRB characteristics. An unexpected anti-correlation between Tc and the peak flux was observed. This means that brighter peaked GRBs have shorter durations. There is also no correlation between the Tc and the decay index, which makes the anti-correlation with brightness more clear. This results appears to be consistent with the External Shock model, which is one of the competing hypothesis on the origin of the high-energy emission. We did not observe any bimodality, which is seen in GRBs at lower energies.

  1. PAMELA and Fermi LAT signals from long-lived Kaluza-Klein dark matter

    SciTech Connect

    Okada, Nobuchika; Yamada, Toshifumi

    2009-10-01

    We propose a simple extension of the minimal universal extra dimension model by introducing a small curvature. The model is formulated as a small anti-de Sitter curvature limit of the five-dimensional standard model (SM) in the Randall-Sundrum background geometry. While the lightest Kaluza-Klein (KK) particle can be thermal relic dark matter as usual in the universal extra dimension model, the KK parity is explicitly broken in the presence of the small curvature and the KK dark matter decays into the SM fermions with a long lifetime. Couplings of the KK dark matter with SM fermion pairs in the five-dimensional bulk are controlled by fermion bulk masses. By tuning bulk masses of quarks, we can suppress KK dark matter decay into quarks. With a suitable choice of bulk masses for leptons, KK dark matter decay into leptons can account for the cosmic-ray electron/positron excesses reported by the recent PAMELA and Fermi LAT satellite experiments.

  2. Anisotropies in the Diffuse Gamma-Ray Background Measured by the Fermi LAT

    NASA Technical Reports Server (NTRS)

    Ferrara, E. C.; McEnery, J. E.; Troja, E.

    2012-01-01

    The contribution of unresolved sources to the diffuse gamma-ray background could induce anisotropies in this emission on small angular scales. We analyze the angular power spectrum of the diffuse emission measured by the Fermi LAT at Galactic latitudes absolute value of b > 30 deg in four energy bins spanning 1 to 50 GeV. At multipoles l >= 155, corresponding to angular scales approx < 2 deg, angular power above the photon noise level is detected at > 99.99% CL in the 1-2 GeV, 2- 5 GeV, and 5- 10 GeV energy bins, and at > 99% CL at 10-50 GeV. Within each energy bin the measured angular power takes approximately the same value at all multipoles l >= 155, suggesting that it originates from the contribution of one or more unclustered source populations. The amplitude of the angular power normalized to the mean intensity in each energy bin is consistent with a constant value at all energies, C(sub p) / (I)(exp 2) = 9.05 +/- 0.84 x 10(exp -6) sr, while the energy dependence of C(sub p) is consistent with the anisotropy arising from one or more source populations with power-law photon spectra with spectral index Gamma (sub s) = 2.40 +/- 0.07. We discuss the implications of the measured angular power for gamma-ray source populations that may provide a contribution to the diffuse gamma-ray background.

  3. Implications of Fermi-LAT observations on the origin of IceCube neutrinos

    SciTech Connect

    Wang, Bin; Li, Zhuo; Zhao, Xiaohong E-mail: zhaoxh@ynao.ac.cn

    2014-11-01

    The IceCube (IC) collaboration recently reported the detection of TeV-PeV extraterrestrial neutrinos whose origin is yet unknown. By the photon-neutrino connection in pp and pγ interactions, we use the Fermi-LAT observations to constrain the origin of the IC detected neutrinos. We find that Galactic origins, i.e., the diffuse Galactic neutrinos due to cosmic ray (CR) propagation in the Milky Way, and the neutrinos from the Galactic point sources, may not produce the IC neutrino flux, thus these neutrinos should be of extragalactic origin. Moreover, the extragalactic gamma-ray bursts (GRBs) may not account for the IC neutrino flux, the jets of active galactic nuclei may not produce the IC neutrino spectrum, but the starburst galaxies (SBGs) may be promising sources. As suggested by the consistency between the IC detected neutrino flux and the Waxman-Bahcall bound, GRBs in SBGs may be the sources of both the ultrahigh energy, ∼> 10{sup 19}eV, CRs and the 1–100 PeV CRs that produce the IC detected TeV-PeV neutrinos.

  4. Regulation of a LATS-homolog by Ras GTPases is important for the control of cell division

    PubMed Central

    2014-01-01

    Background Nuclear Dbf-related/large tumor suppressor (NDR/LATS) kinases have been shown recently to control pathways that regulate mitotic exit, cytokinesis, cell growth, morphological changes and apoptosis. LATS kinases are core components of the Hippo signaling cascade and important tumor suppressors controlling cell proliferation and organ size in flies and mammals, and homologs are also present in yeast and Dictyostelium discoideum. Ras proto-oncogens regulate many biological functions, including differentiation, proliferation and apoptosis. Dysfunctions of LATS kinases or Ras GTPases have been implicated in the development of a variety of cancers in humans. Results In this study we used the model organism Dictyostelium discoideum to analyze the functions of NdrC, a homolog of the mammalian LATS2 protein, and present a novel regulatory mechanism for this kinase. Deletion of the ndrC gene caused impaired cell division and loss of centrosome integrity. A yeast two-hybrid analysis, using activated Ras proteins as bait, revealed NdrC as an interactor and identified its Ras-binding domain. Further in vitro pull-down assays showed that NdrC binds RasG and RasB, and to a lesser extent RasC and Rap1. In cells lacking NdrC, the levels of activated RasB and RasG are up-regulated, suggesting a functional connection between RasB, RasG, and NdrC. Conclusions Dictyostelium discoideum NdrC is a LATS2-homologous kinase that is important for the regulation of cell division. NdrC contains a Ras-binding domain and interacts preferentially with RasB and RasG. Changed levels of both, RasB or RasG, have been shown previously to interfere with cell division. Since a defect in cell division is exhibited by NdrC-null cells, RasG-null cells, and cells overexpressing activated RasB, we propose a model for the regulation of cytokinesis by NdrC that involves the antagonistic control by RasB and RasG. PMID:24986648

  5. Comparison of tests to detect oxacillin resistance in Staphylococcus intermedius, Staphylococcus schleiferi, and Staphylococcus aureus isolates from canine hosts.

    PubMed

    Bemis, David A; Jones, Rebekah D; Hiatt, Lauren E; Ofori, Edward D; Rohrbach, Barton W; Frank, Linda A; Kania, Stephen A

    2006-09-01

    Multiple tests were compared to the reference standard PBP2a latex agglutination test for detection of mecA-mediated oxacillin resistance in canine staphylococci. Cefoxitin disk diffusion, using breakpoints for human isolates of coagulase-negative Staphylococcus spp., had low sensitivity for detection of oxacillin resistance in members of the Staphylococcus intermedius group.

  6. Constraints on the dark matter annihilation from Fermi-LAT observation of M31

    NASA Astrophysics Data System (ADS)

    Li, Zhengwei; Huang, Xiaoyuan; Yuan, Qiang; Xu, Yupeng

    2016-12-01

    Gamma-ray is a good probe of dark matter (DM) particles in the Universe. We search for the DM annihilation signals in the direction of the Andromeda galaxy (M31) using 7.5 year Fermi-LAT pass 8 data. Similar to Pshirkov et al. (2016), we find that there is residual excess emission from the direction of M31 if only the galactic disk as traced by the far infrared emission is considered. Adding a point-like source will improve the fitting effectively, although additional slight improvements can be found if an extended component such as a uniform disk or two bubbles is added instead. Taking the far infrared disk plus a point source as the background model, we search for the DM annihilation signals in the data. We find that there is strong degeneracy between the emission from the galaxy and that from 10s GeV mass DM annihilation in the main halo with quark final state. However, the required DM annihilation cross section is about 10-25-10-24 cm3s-1, orders of magnitude larger than the constraints from observations of dwarf spheroidal galaxies, indicating a non-DM origin of the emission. If DM subhalos are taken into account, the degeneracy is broken. When considering the enhancement from DM subhalos, the constraints on DM model parameters are comparable to (or slightly weaker than) those from the population of dwarf spheroidal galaxies. We also discuss the inverse Compton scattering component from DM annihilation induced electrons/positrons. For the first time we include an energy dependent template of the inverse Compton emission (i.e., a template cube) in the data analysis to take into account the effect of diffusion of charged particles. We find a significant improvement of the constraints in the high mass range of DM particles after considering the inverse Compton emission.

  7. Limits on large extra dimensions based on observations of neutron stars with the Fermi-LAT

    SciTech Connect

    Ajello, M.; Bechtol, K.; Berenji, B.; Bloom, E.D.; Borgland, A.W.; Buehler, R.; Cameron, R.A.; Baldini, L.; Bellazzini, R.; Bregeon, J.; Barbiellini, G.; Bastieri, D.; Buson, S.; Bonamente, E.; Cecchi, C.; Brigida, M.; Bruel, P.; Caraveo, P.A.; Casandjian, J.M. E-mail: elliott@slac.stanford.edu [Laboratoire AIM, CEA-IRFU Collaboration: Fermi-LAT collaboration; and others

    2012-02-01

    We present limits for the compactification scale in the theory of Large Extra Dimensions (LED) proposed by Arkani-Hamed, Dimopoulos, and Dvali. We use 11 months of data from the Fermi Large Area Telescope (Fermi-LAT) to set gamma ray flux limits for 6 gamma-ray faint neutron stars (NS). To set limits on LED we use the model of Hannestad and Raffelt (HR) that calculates the Kaluza-Klein (KK) graviton production in supernova cores and the large fraction subsequently gravitationally bound around the resulting NS. The predicted decay of the bound KK gravitons to γγ should contribute to the flux from NSs. Considering 2 to 7 extra dimensions of the same size in the context of the HR model, we use Monte Carlo techniques to calculate the expected differential flux of gamma-rays arising from these KK gravitons, including the effects of the age of the NS, graviton orbit, and absorption of gamma-rays in the magnetosphere of the NS. We compare our Monte Carlo-based differential flux to the experimental differential flux using maximum likelihood techniques to obtain our limits on LED. Our limits are more restrictive than past EGRET-based optimistic limits that do not include these important corrections. Additionally, our limits are more stringent than LHC based limits for 3 or fewer LED, and comparable for 4 LED. We conclude that if the effective Planck scale is around a TeV, then for 2 or 3 LED the compactification topology must be more complicated than a torus.

  8. Brightest Fermi-LAT flares of PKS 1222+216: implications on emission and acceleration processes

    SciTech Connect

    Kushwaha, Pankaj; Singh, K. P.; Sahayanathan, Sunder

    2014-11-20

    We present a high time resolution study of the two brightest γ-ray outbursts from a blazar PKS 1222+216 observed by the Fermi Large Area Telescope (LAT) in 2010. The γ-ray light curves obtained in four different energy bands, 0.1-3, 0.1-0.3, 0.3-1, and 1-3 GeV, with time bins of six hours, show asymmetric profiles with similar rise times in all the bands but a rapid decline during the April flare and a gradual one during the June flare. The light curves during the April flare show an ∼2 day long plateau in 0.1-0.3 GeV emission, erratic variations in 0.3-1 GeV emission, and a daily recurring feature in 1-3 GeV emission until the rapid rise and decline within a day. The June flare shows a monotonic rise until the peak, followed by a gradual decline powered mainly by the multi-peak 0.1-0.3 GeV emission. The peak fluxes during both the flares are similar except in the 1-3 GeV band in April, which is twice the corresponding flux during the June flare. Hardness ratios during the April flare indicate spectral hardening in the rising phase followed by softening during the decay. We attribute this behavior to the development of a shock associated with an increase in acceleration efficiency followed by its decay leading to spectral softening. The June flare suggests hardening during the rise followed by a complicated energy dependent behavior during the decay. Observed features during the June flare favor multiple emission regions while the overall flaring episode can be related to jet dynamics.

  9. Limits on Large Extra Dimensions Based on Observations of Neutron Stars with the Fermi-LAT

    SciTech Connect

    Ajello, M.; Baldini, L.; Barbiellini, G.; Bastieri, D.; Bechtol, K.; Bellazzini, R.; Berenji, B.; Bloom, E.D.; Bonamente, E.; Borgland, A.W.; Bregeon, J.; Brigida, M.; Bruel, P.; Buehler, R.; Buson, S.; Caliandro, G.A.; Cameron, R.A.; Caraveo, P.A.; Casandjian, J.M.; Cecchi, C.; Charles, E.; /more authors..

    2012-08-17

    We present limits for the compactification scale in the theory of Large Extra Dimensions (LED) proposed by Arkani-Hamed, Dimopoulos, and Dvali. We use 11 months of data from the Fermi Large Area Telescope (Fermi-LAT) to set gamma ray flux limits for 6 gamma-ray faint neutron stars (NS). To set limits on LED we use the model of Hannestad and Raffelt (HR) that calculates the Kaluza-Klein (KK) graviton production in supernova cores and the large fraction subsequently gravitationally bound around the resulting NS. The predicted decay of the bound KK gravitons to {gamma}{gamma} should contribute to the flux from NSs. Considering 2 to 7 extra dimensions of the same size in the context of the HR model, we use Monte Carlo techniques to calculate the expected differential flux of gamma-rays arising from these KK gravitons, including the effects of the age of the NS, graviton orbit, and absorption of gamma-rays in the magnetosphere of the NS. We compare our Monte Carlo-based differential flux to the experimental differential flux using maximum likelihood techniques to obtain our limits on LED. Our limits are more restrictive than past EGRET-based optimistic limits that do not include these important corrections. Additionally, our limits are more stringent than LHC based limits for 3 or fewer LED, and comparable for 4 LED. We conclude that if the effective Planck scale is around a TeV, then for 2 or 3 LED the compactification topology must be more complicated than a torus.

  10. Fermi-LAT Constraints on the Pulsar Wind Nebula Nature of HESS J1857+026

    NASA Technical Reports Server (NTRS)

    Rousseau, R.; Grondin, M.-H.; VanEtten, A.; Lemoine-Goumard, M.; Bogdanov, S.; Hessels, J. W. T.; Kaspi, V. M.; Arzoumanian, Z.; Camilo, F.; Casandjian, J. M.; Espinoza, C. M.; Johnston, S.; Lyne, A. G.; Smith, D. A.; Stappers, B. W.; Caliandro, G. A.

    2012-01-01

    Since its launch, the Fermi satellite has firmly identified 5 pulsar wind nebulae plus a large number of candidates, all powered by young and energetic pulsars. HESS J1857+026 is a spatially extended gamma-ray source detected by H.E.S.S. and classified as a possible pulsar wind nebula candidate powered by PSR J1856+0245. Aims. We search for -ray pulsations from PSR J1856+0245 and explore the characteristics of its associated pulsar wind nebula. Methods. Using a rotational ephemeris obtained from the Lovell telescope at Jodrell Bank Observatory at 1.5 GHz, we phase.fold 36 months of gamma-ray data acquired by the Large Area Telescope (LAT) aboard Fermi. We also perform a complete gamma-ray spectral and morphological analysis. Results. No pulsation was detected from PSR J1856+0245. However, significant emission is detected at a position coincident with the TeV source HESS J1857+026. The gamma-ray spectrum is well described by a simple power law with a spectral index of Gamma = 1.53 +/- 0.11(sub stat) +/- 0.55(sub syst) and an energy flux of G(0.1 C100 GeV) = (2.71 +/- 0.52(sub stat) +/- 1.51(sub syst) X 10(exp -11) ergs/ sq cm/s. This implies a gamma.ray efficiency of approx 5 %, assuming a distance of 9 kpc, the gamma-ray luminosity of L(sub gamma) (sub PWN) (0.1 C100 GeV) = (2.5 +/- 0.5(sub stat) +/- 1.5(sub syst)) X 10(exp 35)(d/(9kpc))(exp 2) ergs/s and E-dot = 4.6 X 10(exp 36) erg /s, in the range expected for pulsar wind nebulae. Detailed multi-wavelength modeling provides new constraints on its pulsar wind nebula nature.

  11. Limits on Large Extra Dimensions Based on Observations of Neutron Stars with the Fermi-LAT

    NASA Technical Reports Server (NTRS)

    Ferrara, E. C.; Scargle, J. D.; Troja, E.

    2012-01-01

    We present limits for the compactification scale in the theory of Large Extra Dimensions (LED) proposed by Arkani-Hamed, Dimopoulos, and Dvali. We use 11 months of data from the Fermi Large Area Telescope (Fermi-LAT) to set gamma ray flux limits for 6 gamma-ray faint neutron stars (NS). To set limits on LED we use the model of Hannestad and Raffelt (HR) that calculates the Kaluza-Klein (KK) graviton production in supernova cores and the large fraction subsequently gravitationally bound around the resulting NS. The predicted decay of the bound KK gravitons to should contribute to the flux from NSs. Considering 2 to 7 extra dimensions of the same size in the context of the HR model, we use Monte Carlo techniques to calculate the expected differential flux of gamma-rays arising from these KK gravitons, including the effects of the age of the NS, graviton orbit, and absorption of gamma-rays in the magnetosphere of the NS. We compare our Monte Carlo-based differential flux to the experimental differential flux using maximum likelihood techniques to obtain our limits on LED. Our limits are more restrictive than past EGRET-based optimistic limits that do not include these important corrections. Additionally, our limits are more stringent than LHC based limits for 3 or fewer LED, and comparable for 4 LED. We conclude that if the effective Planck scale is around a TeV, then for 2 or 3 LED the compactification topology must be more complicated than a torus.

  12. Oriented Cell Division in the C. elegans Embryo Is Coordinated by G-Protein Signaling Dependent on the Adhesion GPCR LAT-1

    PubMed Central

    Fiedler, Franziska; Sastradihardja, Tania; Binder, Claudia; Schnabel, Ralf; Kungel, Jana; Rothemund, Sven; Hennig, Christian; Schöneberg, Torsten; Prömel, Simone

    2015-01-01

    Orientation of spindles and cell division planes during development of many species ensures that correct cell-cell contacts are established, which is vital for proper tissue formation. This is a tightly regulated process involving a complex interplay of various signals. The molecular mechanisms underlying several of these pathways are still incompletely understood. Here, we identify the signaling cascade of the C. elegans latrophilin homolog LAT-1, an essential player in the coordination of anterior-posterior spindle orientation during the fourth round of embryonic cell division. We show that the receptor mediates a G protein-signaling pathway revealing that G-protein signaling in oriented cell division is not solely GPCR-independent. Genetic analyses showed that through the interaction with a Gs protein LAT-1 elevates intracellular cyclic AMP (cAMP) levels in the C. elegans embryo. Stimulation of this G-protein cascade in lat-1 null mutant nematodes is sufficient to orient spindles and cell division planes in the embryo in the correct direction. Finally, we demonstrate that LAT-1 is activated by an intramolecular agonist to trigger this cascade. Our data support a model in which a novel, GPCR-dependent G protein-signaling cascade mediated by LAT-1 controls alignment of cell division planes in an anterior-posterior direction via a metabotropic Gs-protein/adenylyl cyclase pathway by regulating intracellular cAMP levels. PMID:26505631

  13. Searching the Gamma-Ray Sky for Counterparts to Gravitational Wave Sources: /Fermi GBM and LAT Observations of LVT151012 and GW151226

    NASA Astrophysics Data System (ADS)

    Racusin, J. L.; Burns, E.; Goldstein, A.; Connaughton, V.; Wilson-Hodge, C. A.; Jenke, P.; Blackburn, L.; Briggs, M. S.; Broida, J.; Camp, J.; Christensen, N.; Hui, C. M.; Littenberg, T.; Shawhan, P.; Singer, L.; Veitch, J.; Bhat, P. N.; Cleveland, W.; Fitzpatrick, G.; Gibby, M. H.; von Kienlin, A.; McBreen, S.; Mailyan, B.; Meegan, C. A.; Paciesas, W. S.; Preece, R. D.; Roberts, O. J.; Stanbro, M.; Veres, P.; Zhang, B.-B.; Fermi LAT Collaboration; Ackermann, M.; Albert, A.; Atwood, W. B.; Axelsson, M.; Baldini, L.; Ballet, J.; Barbiellini, G.; Baring, M. G.; Bastieri, D.; Bellazzini, R.; Bissaldi, E.; Blandford, R. D.; Bloom, E. D.; Bonino, R.; Bregeon, J.; Bruel, P.; Buson, S.; Caliandro, G. A.; Cameron, R. A.; Caputo, R.; Caragiulo, M.; Caraveo, P. A.; Cavazzuti, E.; Charles, E.; Chiang, J.; Ciprini, S.; Costanza, F.; Cuoco, A.; Cutini, S.; D’Ammando, F.; de Palma, F.; Desiante, R.; Digel, S. W.; Di Lalla, N.; Di Mauro, M.; Di Venere, L.; Drell, P. S.; Favuzzi, C.; Ferrara, E. C.; Focke, W. B.; Fukazawa, Y.; Funk, S.; Fusco, P.; Gargano, F.; Gasparrini, D.; Giglietto, N.; Gill, R.; Giroletti, M.; Glanzman, T.; Granot, J.; Green, D.; Grove, J. E.; Guillemot, L.; Guiriec, S.; Harding, A. K.; Jogler, T.; Jóhannesson, G.; Kamae, T.; Kensei, S.; Kocevski, D.; Kuss, M.; Larsson, S.; Latronico, L.; Li, J.; Longo, F.; Loparco, F.; Lubrano, P.; Magill, J. D.; Maldera, S.; Malyshev, D.; Mazziotta, M. N.; McEnery, J. E.; Michelson, P. F.; Mizuno, T.; Monzani, M. E.; Morselli, A.; Moskalenko, I. V.; Negro, M.; Nuss, E.; Omodei, N.; Orienti, M.; Orlando, E.; Ormes, J. F.; Paneque, D.; Perkins, J. S.; Pesce-Rollins, M.; Piron, F.; Pivato, G.; Porter, T. A.; Principe, G.; Rainò, S.; Rando, R.; Razzano, M.; Razzaque, S.; Reimer, A.; Reimer, O.; Saz Parkinson, P. M.; Scargle, J. D.; Sgrò, C.; Simone, D.; Siskind, E. J.; Smith, D. A.; Spada, F.; Spinelli, P.; Suson, D. J.; Tajima, H.; Thayer, J. B.; Torres, D. F.; Troja, E.; Uchiyama, Y.; Vianello, G.; Wood, K. S.; Wood, M.

    2017-01-01

    We present the Fermi Gamma-ray Burst Monitor (GBM) and Large Area Telescope (LAT) observations of the LIGO binary black hole merger event GW151226 and candidate LVT151012. At the time of the LIGO triggers on LVT151012 and GW151226, GBM was observing 68% and 83% of the localization regions, and LAT was observing 47% and 32%, respectively. No candidate electromagnetic counterparts were detected by either the GBM or LAT. We present a detailed analysis of the GBM and LAT data over a range of timescales from seconds to years, using automated pipelines and new techniques for characterizing the flux upper bounds across large areas of the sky. Due to the partial GBM and LAT coverage of the large LIGO localization regions at the trigger times for both events, differences in source distances and masses, as well as the uncertain degree to which emission from these sources could be beamed, these non-detections cannot be used to constrain the variety of theoretical models recently applied to explain the candidate GBM counterpart to GW150914.

  14. Gamma-Ray Flaring Activity from the Gravitationally Lensed Blazar PKS 1830-211 Observed by Fermi LAT

    SciTech Connect

    Abdo, A. A.; et al.

    2015-01-23

    The Large Area Telescope (LAT) on board the Fermi Gamma-ray Space Telescope routinely detects the MeV-peaked flat-spectrum radio quasar PKS 1830–211 (z = 2.507). Its apparent isotropic γ-ray luminosity (E > 100 MeV), averaged over ~3 years of observations and peaking on 2010 October 14/15 at 2.9 × 10(50) erg s(–)(1), makes it among the brightest high-redshift Fermi blazars. No published model with a single lens can account for all of the observed characteristics of this complex system. Based on radio observations, one expects time-delayed variability to follow about 25 days after a primary flare, with flux about a factor of 1.5 less. Two large γ-ray flares of PKS 1830–211 have been detected by the LAT in the considered period, and no substantial evidence for such a delayed activity was found. This allows us to place a lower limit of about 6 on the γ-ray flux ratio between the two lensed images. Swift XRT observations from a dedicated Target of Opportunity program indicate a hard spectrum with no significant correlation of X-ray flux with the γ-ray variability. The spectral energy distribution can be modeled with inverse Compton scattering of thermal photons from the dusty torus. The implications of the LAT data in terms of variability, the lack of evident delayed flare events, and different radio and γ-ray flux ratios are discussed. Microlensing effects, absorption, size and location of the emitting regions, the complex mass distribution of the system, an energy-dependent inner structure of the source, and flux suppression by the lens galaxy for one image path may be considered as hypotheses for understanding our results.

  15. GAMMA-RAY FLARING ACTIVITY FROM THE GRAVITATIONALLY LENSED BLAZAR PKS 1830–211 OBSERVED BY Fermi LAT

    SciTech Connect

    Abdo, A. A.; Ackermann, M.; Buehler, R.; Ajello, M.; Allafort, A.; Bechtol, K.; Blandford, R. D.; Borgland, A. W.; Caliandro, G. A.; Cameron, R. A.; Amin, M. A.; Baldini, L.; Bellazzini, R.; Barbiellini, G.; Bastieri, D.; Buson, S.; Bonamente, E.; Bregeon, J.; Bulmash, D. E-mail: stefano.ciprini@asdc.asi.it E-mail: dammando@ira.inaf.it E-mail: sara.buson@pd.infn.it E-mail: dammando@ira.inaf.it; and others

    2015-02-01

    The Large Area Telescope (LAT) on board the Fermi Gamma-ray Space Telescope routinely detects the MeV-peaked flat-spectrum radio quasar PKS 1830–211 (z = 2.507). Its apparent isotropic γ-ray luminosity (E > 100 MeV), averaged over ∼3 years of observations and peaking on 2010 October 14/15 at 2.9 × 10{sup 50} erg s{sup –1}, makes it among the brightest high-redshift Fermi blazars. No published model with a single lens can account for all of the observed characteristics of this complex system. Based on radio observations, one expects time-delayed variability to follow about 25 days after a primary flare, with flux about a factor of 1.5 less. Two large γ-ray flares of PKS 1830–211 have been detected by the LAT in the considered period, and no substantial evidence for such a delayed activity was found. This allows us to place a lower limit of about 6 on the γ-ray flux ratio between the two lensed images. Swift XRT observations from a dedicated Target of Opportunity program indicate a hard spectrum with no significant correlation of X-ray flux with the γ-ray variability. The spectral energy distribution can be modeled with inverse Compton scattering of thermal photons from the dusty torus. The implications of the LAT data in terms of variability, the lack of evident delayed flare events, and different radio and γ-ray flux ratios are discussed. Microlensing effects, absorption, size and location of the emitting regions, the complex mass distribution of the system, an energy-dependent inner structure of the source, and flux suppression by the lens galaxy for one image path may be considered as hypotheses for understanding our results.

  16. Fermi-LAT Discovery of Extended Gamma-Ray Emission in the Direction of Supernova Remnant W51C

    SciTech Connect

    Abdo, A.A.; Ackermann, M.; Ajello, M.; Baldini, L.; Ballet, J.; Barbiellini, G.; Baring, M.G.; Bastieri, D.; Baughman, B.M.; Bechtol, K.; Bellazzini, R.; Berenji, B.; Blandford, R.D.; Bloom, E.D.; Bonamente, E.; Borgland, A.W.; Bouvier, A.; Bregeon, J.; Brez, A.; Brigida, M.; Bruel, P.; /more authors..

    2012-03-30

    The discovery of bright gamma-ray emission coincident with supernova remnant (SNR) W51C is reported using the Large Area Telescope (LAT) onboard the Fermi Gamma-ray Space Telescope. W51C is a middle-aged remnant ({approx}10{sup 4} yr) with intense radio synchrotron emission in its shell and known to be interacting with a molecular cloud. The gamma-ray emission is spatially extended, broadly consistent with the radio and X-ray extent of SNR W51C. The energy spectrum in the 0.2-50 GeV band exhibits steepening toward high energies. The luminosity is greater than 1 x 10{sup 36} erg s{sup -1} given the distance constraint of D > 5.5 kpc, which makes this object one of the most luminous gamma-ray sources in our Galaxy. The observed gamma-rays can be explained reasonably by a combination of efficient acceleration of nuclear cosmic rays at supernova shocks and shock-cloud interactions. The decay of neutral p mesons produced in hadronic collisions provides a plausible explanation for the gamma-ray emission. The product of the average gas density and the total energy content of the accelerated protons amounts to {bar n}{sub H} W{sub p} {approx_equal} 5 x 10{sup 51} (D/6 kpc){sup 2} erg cm{sup -3}. Electron density constraints from the radio and X-ray bands render it difficult to explain the LAT signal as due to inverse Compton scattering. The Fermi LAT source coincident with SNR W51C sheds new light on the origin of Galactic cosmic rays.

  17. Fermi-LAT detection of a GeV gamma-ray flare from the blazar PKS 1313-333

    NASA Astrophysics Data System (ADS)

    Ciprini, Stefano

    2016-01-01

    The Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, has observed increasing gamma-ray flux from a source positionally consistent with the flat spectrum radio quasar PKS 1313-333 (also known as TXS 1313-333, OP -322, 2EG J1314-3430 and 3FGL J1316.0-3338), with radio counterpart position R.A.: 199.033275 deg, Dec.: -33.64977 deg, (J2000.0, Johnston et al. 1995, AJ, 110, 880) and with redshift z=1.210 (Jauncey et al. 1982, AJ, 87, 763).

  18. Fermi LAT detection of an increase of gamma-ray activity of S5 1044+71

    NASA Astrophysics Data System (ADS)

    D'Ammando, F.; Orienti, M.

    2014-01-01

    The Large Area Telescope (LAT), on board the Fermi Gamma-ray Space Telescope, has observed gamma-ray flaring activity from a source positionally consistent with the flat spectrum radio quasar S5 1044+71 (also known as 2FGL J1048.3+7144, Nolan et al. 2012, ApJS, 199, 31) with radio coordinates R.A.: 162.1150829 deg, Dec: 71.7266494 deg (J2000; Johnston et al. 1995, AJ, 110, 880) at redshift z=1.15 (Polatidis et al.

  19. Fermi-LAT detection of hard spectrum gamma-ray flare from FSRQ S4 1800+44

    NASA Astrophysics Data System (ADS)

    Gasparrini, D.; Buson, S.

    2016-03-01

    The Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, has observed increasing gamma-ray flux and an unusually hard gamma-ray spectrum from a source positionally consistent with the flat spectrum radio quasar (FSRQ) S4 1800+44 (also known as 3FGL J1801.5+4403, Acero et al. 2015, ApJS, 218, 23) with radio counterpart coordinates (J2000.0), R.A. = 270.3846454 deg, Dec. = 44.0727500 deg (Johnston et al. 1995, AJ, 110, 880).

  20. Fermi LAT observation of renewed and strong GeV gamma-ray activity from blazar CTA 102

    NASA Astrophysics Data System (ADS)

    Ciprini, Stefano

    2016-12-01

    The Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, has observed a new phase of strong gamma-ray activity from a source positionally consistent with the flat spectrum radio quasar CTA 102 (also known as 4C +11.69, PKS 2230+11, 3FGL J2232.5+1143) with VLBI coordinates, (J2000.0), R.A.: 338.151704 deg, Dec.: 11.730807 deg (Johnston et al. 1995, AJ, 110, 880).

  1. Fermi LAT Detection of a GeV Flare from the Blazar 4C +01.28

    NASA Astrophysics Data System (ADS)

    Krauss, Felicia; Carpen, Bryce

    2014-02-01

    The Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, has observed increasing gamma-ray flux from a source positionally consistent with 4C +01.28 (also known as PKS 1055+018) RA=10h58m29.6052s, Dec=+01d33m58.824s (J2000; Johnston et al. 1995, AJ, 110, 880) at z= 0.888 (Wills and Lynds 1978, ApJS, 36, 317).

  2. Fermi LAT detection of GeV flares from blazars PKS 0458-02 and B2 1144+40

    NASA Astrophysics Data System (ADS)

    Antolini, Elisa; Buson, Sara

    2014-03-01

    The Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, has observed increasing gamma-ray flux from two sources positionally consistent with the flat spectrum radio quasars PKS 0458-02 (also known as 2FGL J0501.2-0155, Nolan et al. 2012 ApJS, 199, 31) and B2 1144+40 (also known as S4 1144+40 and 2FGL J1146.9+4000). PKS 0458-02 has the radio coordinates RA=05h01m12.8098s, Dec=-1d59m14.255s (J2000, Johnston et al.

  3. The Monster Next Door: Fermi-LAT Observations of Supernova Remnant N132D in the Large Magellanic Cloud

    NASA Astrophysics Data System (ADS)

    Castro, Daniel; Hays, Elizabeth; Acero, Fabio; Slane, Patrick; Hughes, John; Plucinsky, Paul; Fermi-LAT Collaboration Collaboration

    2017-01-01

    Supernova remnant (SNR) N132D, located in the Large Magellanic Cloud, represents a unique opportunity for the study of γ-ray emission from shock accelerated cosmic rays (CRs) in another galaxy since it stands as the first and only extra-Galactic SNR detected in γ-rays. N132D is bright in the X-ray, infrared and radio bands, as well as being detected in TeV energy γ-rays, and hence, characterizing its emission in the Fermi-LAT band allows us to build a very complete picture of the properties of the system and its progenitor, and help us understand CR acceleration in SNRs.

  4. Fermi-LAT detection of a GeV gamma-ray flare from the blazar PKS 0514-459

    NASA Astrophysics Data System (ADS)

    Ciprini, Stefano

    2016-01-01

    The Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, has observed increasing gamma-ray flux from a source positionally consistent with the flat spectrum radio quasar PKS 0514-459 (also known as RX J0515.7-4556 and 3FGL J0515.3-4557), with radio counterpart position R.A.: 78.938767 deg, Dec.: -45.945369 deg (J2000.0, Costa & Loyola 1996, A & AS, 115, 75) and with redshift z=0.194 (Stickel, Kuehr, & Fried 1993, A & AS, 97, 483).

  5. Fermi LAT detection of increasing gamma-ray emission from the radio-loud NLSy1 PKS 1502+036

    NASA Astrophysics Data System (ADS)

    D'Ammando, Filippo; Ciprini, Stefano

    2015-12-01

    The Large Area Telescope (LAT), on board the Fermi Gamma-ray Space Telescope, has observed gamma-ray flaring activity from a source positionally consistent with the radio-loud narrow-line Seyfert 1 PKS 1502+036 (also known as 3FGL J1505.1+0326, Acero et al. 2015, ApJS, 218, 23), with radio coordinates (J2000.0), R.A.: 226.2769879 deg, Dec.: 3.4418922 deg (Fey et al. 2004, AJ, 127, 3587) at redshift z = 0.4078 (Hewett & Wild 2010, MNRAS, 405, 2302).

  6. Space Detectors for Gamma Rays (100 MeV-100 GeV): from Egret to Fermi LAT

    NASA Technical Reports Server (NTRS)

    Thompson, David J.

    2015-01-01

    The design of spaceborne high-energy (E is greater than 100 MeV) gamma-ray detectors depends on two principal factors: (1) the basic physics of detecting and measuring the properties of the gamma rays; and (2) the constraints of operating such a detector in space for an extended period. Improvements in technology have enabled major advances in detector performance, as illustrated by two successful instruments, EGRET on the Compton Gamma Ray Observatory and LAT on the Fermi Gamma-ray Space Telescope.

  7. Limits to dark matter annihilation cross-section from a combined analysis of MAGIC and Fermi-LAT observations of dwarf satellite galaxies

    SciTech Connect

    MAGIC Collaboration

    2016-02-01

    We present the first joint analysis of gamma-ray data from the MAGIC Cherenkov telescopes and the Fermi Large Area Telescope (LAT) to search for gamma-ray signals from dark matter annihilation in dwarf satellite galaxies. We combine 158 hours of Segue 1 observations with MAGIC with 6-year observations of 15 dwarf satellite galaxies by the Fermi-LAT. We obtain limits on the annihilation cross-section for dark matter particle masses between 10 GeV and 100 TeV—the widest mass range ever explored by a single gamma-ray analysis. These limits improve on previously published Fermi-LAT and MAGIC results by up to a factor of two at certain masses. Our new inclusive analysis approach is completely generic and can be used to perform a global, sensitivity-optimized dark matter search by combining data from present and future gamma-ray and neutrino detectors.

  8. Extending the Fermi-LAT Data Processing Pipeline to the Grid

    NASA Astrophysics Data System (ADS)

    Zimmer, S.; Arrabito, L.; Glanzman, T.; Johnson, T.; Lavalley, C.; Tsaregorodtsev, A.

    2012-12-01

    The Data Handling Pipeline (“Pipeline”) has been developed for the Fermi Gamma-Ray Space Telescope (Fermi) Large Area Telescope (LAT) which launched in June 2008. Since then it has been in use to completely automate the production of data quality monitoring quantities, reconstruction and routine analysis of all data received from the satellite and to deliver science products to the collaboration and the Fermi Science Support Center. Aside from the reconstruction of raw data from the satellite (Level 1), data reprocessing and various event-level analyses are also reasonably heavy loads on the pipeline and computing resources. These other loads, unlike Level 1, can run continuously for weeks or months at a time. In addition it receives heavy use in performing production Monte Carlo tasks. In daily use it receives a new data download every 3 hours and launches about 2000 jobs to process each download, typically completing the processing of the data before the next download arrives. The need for manual intervention has been reduced to less than 0.01% of submitted jobs. The Pipeline software is written almost entirely in Java and comprises several modules. The software comprises web-services that allow online monitoring and provides charts summarizing work flow aspects and performance information. The server supports communication with several batch systems such as LSF and BQS and recently also Sun Grid Engine and Condor. This is accomplished through dedicated job control services that for Fermi are running at SLAC and the other computing site involved in this large scale framework, the Lyon computing center of IN2P3. While being different in the logic of a task, we evaluate a separate interface to the Dirac system in order to communicate with EGI sites to utilize Grid resources, using dedicated Grid optimized systems rather than developing our own. More recently the Pipeline and its associated data catalog have been generalized for use by other experiments, and are

  9. Detection of the Small Magellanic Cloud in gamma-rays with Fermi/LAT

    NASA Astrophysics Data System (ADS)

    Abdo, A. A.; Ackermann, M.; Ajello, M.; Baldini, L.; Ballet, J.; Barbiellini, G.; Bastieri, D.; Bechtol, K.; Bellazzini, R.; Berenji, B.; Blandford, R. D.; Bloom, E. D.; Bonamente, E.; Borgland, A. W.; Bouvier, A.; Brandt, T. J.; Bregeon, J.; Brez, A.; Brigida, M.; Bruel, P.; Buehler, R.; Buson, S.; Caliandro, G. A.; Cameron, R. A.; Caraveo, P. A.; Carrigan, S.; Casandjian, J. M.; Cecchi, C.; Çelik, Ö.; Charles, E.; Chekhtman, A.; Cheung, C. C.; Chiang, J.; Ciprini, S.; Claus, R.; Cohen-Tanugi, J.; Conrad, J.; Dermer, C. D.; de Palma, F.; Digel, S. W.; Silva, E. Do Couto E.; Drell, P. S.; Dubois, R.; Dumora, D.; Favuzzi, C.; Fegan, S. J.; Fukazawa, Y.; Funk, S.; Fusco, P.; Gargano, F.; Gasparrini, D.; Gehrels, N.; Germani, S.; Giglietto, N.; Giordano, F.; Giroletti, M.; Glanzman, T.; Godfrey, G.; Grenier, I. A.; Grondin, M.-H.; Grove, J. E.; Guiriec, S.; Hadasch, D.; Harding, A. K.; Hayashida, M.; Hays, E.; Horan, D.; Hughes, R. E.; Jean, P.; Jóhannesson, G.; Johnson, A. S.; Johnson, W. N.; Kamae, T.; Katagiri, H.; Kataoka, J.; Kerr, M.; Knödlseder, J.; Kuss, M.; Lande, J.; Latronico, L.; Lee, S.-H.; Lemoine-Goumard, M.; Llena Garde, M.; Longo, F.; Loparco, F.; Lovellette, M. N.; Lubrano, P.; Makeev, A.; Martin, P.; Mazziotta, M. N.; McEnery, J. E.; Michelson, P. F.; Mitthumsiri, W.; Mizuno, T.; Monte, C.; Monzani, M. E.; Morselli, A.; Moskalenko, I. V.; Murgia, S.; Nakamori, T.; Naumann-Godo, M.; Nolan, P. L.; Norris, J. P.; Nuss, E.; Ohsugi, T.; Okumura, A.; Omodei, N.; Orlando, E.; Ormes, J. F.; Panetta, J. H.; Parent, D.; Pelassa, V.; Pepe, M.; Pesce-Rollins, M.; Piron, F.; Porter, T. A.; Rainò, S.; Rando, R.; Razzano, M.; Reimer, A.; Reimer, O.; Reposeur, T.; Ripken, J.; Ritz, S.; Romani, R. W.; Sadrozinski, H. F.-W.; Sander, A.; Saz Parkinson, P. M.; Scargle, J. D.; Sgrò, C.; Siskind, E. J.; Smith, D. A.; Smith, P. D.; Spandre, G.; Spinelli, P.; Strickman, M. S.; Strong, A. W.; Suson, D. J.; Takahashi, H.; Takahashi, T.; Tanaka, T.; Thayer, J. B.; Thayer, J. G.; Thompson, D. J.; Tibaldo, L.; Torres, D. F.; Tosti, G.; Tramacere, A.; Uchiyama, Y.; Usher, T. L.; Vandenbroucke, J.; Vasileiou, V.; Vilchez, N.; Vitale, V.; Waite, A. P.; Wang, P.; Winer, B. L.; Wood, K. S.; Yang, Z.; Ylinen, T.; Ziegler, M.

    2010-11-01

    Context. The flux of gamma rays with energies greater than 100 MeV is dominated by diffuse emission coming from cosmic-rays (CRs) illuminating the interstellar medium (ISM) of our Galaxy through the processes of Bremsstrahlung, pion production and decay, and inverse-Compton scattering. The study of this diffuse emission provides insight into the origin and transport of cosmic rays. Aims: We searched for gamma-ray emission from the Small Magellanic Cloud (SMC) in order to derive constraints on the cosmic-ray population and transport in an external system with properties different from the Milky Way. Methods: We analysed the first 17 months of continuous all-sky observations by the Large Area Telescope (LAT) of the Fermi mission to determine the spatial distribution, flux and spectrum of the gamma-ray emission from the SMC. We also used past radio synchrotron observations of the SMC to study the population of CR electrons specifically. Results: We obtained the first detection of the SMC in high-energy gamma rays, with an integrated >100 MeV flux of (3.7±0.7) × 10-8 ph cm-2 s-1, with additional systematic uncertainty of ≤16%. The emission is steady and from an extended source ~3° in size. It is not clearly correlated with the distribution of massive stars or neutral gas, nor with known pulsars or supernova remnants, but a certain correlation with supergiant shells is observed. Conclusions: The observed flux implies an upper limit on the average CR nuclei density in the SMC of ~15% of the value measured locally in the Milky Way. The population of high-energy pulsars of the SMC may account for a substantial fraction of the gamma-ray flux, which would make the inferred CR nuclei density even lower. The average density of CR electrons derived from radio synchrotron observations is consistent with the same reduction factor but the uncertainties are large. From our current knowledge of the SMC, such a low CR density does not seem to be due to a lower rate of CR

  10. The herpes simplex virus type 1 (HSV-1) latency-associated transcript (LAT) protects cells against cold-shock-induced apoptosis by maintaining phosphorylation of protein kinase B (AKT)

    PubMed Central

    Carpenter, Dale; Hsiang, Chinhui; Jiang, Xianzhi; Osorio, Nelson; BenMohamed, Lbachir; Jones, Clinton

    2017-01-01

    The herpes simplex virus type 1 (HSV-1) latency-associated transcript (LAT) blocks apoptosis and inhibits caspase-3 activation. We previously showed that serum starvation (removal of serum from tissue culture media), which takes several days to induce apoptosis, results in decreased levels of both AKT (protein kinase B) and phosphorylated AKT (pAKT) in cells not expressing LAT. In contrast in mouse neuroblastoma cells expressing LAT, AKT, and pAKT levels remained high. AKT is a serine/threonine protein kinase that promotes cell survival. To examine the effect of LAT on AKT-pAKT using a different and more rapid method of inducing apoptosis, a stable cell line expressing LAT was compared to non-LAT expressing cells as soon as 15 min following recovery from cold-shock-induced apoptosis. Expression of LAT appeared to inhibit dephosphorylation of pAKT. This protection correlated with blocking numerous pro-apoptotic events that are inhibited by pAKT. These results support the hypothesis that inhibiting dephosphorylation of pAKT may be one of the pathways by which LAT protects cells against apoptosis. PMID:26071090

  11. Agglutinated foraminifera from the Sydney Coalfield, Nova Scotia: Their use as indicators of sea-level changes in Carboniferous coal-bearing strata

    SciTech Connect

    Wightman, W.G.; Scott, D.B.; Medioli, F.M.; Gibling, M.R. . Centre for Marine Geology)

    1992-01-01

    Agglutinated foraminifera and arcellaceans (the camoebians) were examined from Carboniferous (Late Westphalian-Stephanian) cyclothems in the Sydney Basin of Nova Scotia. Their presence confirms that the laterally extensive coal seams, limestones, mudstones and carbonaceous shales were deposited in a paralic setting. Four distinctive assemblages are documented from the coal-bearing strata, and these may be used as accurate paleo sea-level indicators on the basis of the modern distribution of similar assemblages. Mixed assemblages dominated by Ammobaculites characterize siltstones overlying the coal seams, an association typical of mineralic substrates within modern estuarine environments. Assemblages dominated by small, finely agglutinated specimens of Ammotium and Ammobaculites occur in organic rich strata between coal seam splits. Similar assemblages are found in modern salt marshes and upper estuarine settings. Trochammina dominated assemblages occur in mudstones underlying the coal seams. Such assemblages are typical of higher elevations in modern brackish and saline marshes. Monotypic assemblages of the arcellacean Difflugia are also found in the seat earths below coal seams. Similar associations occur today in mineralic substrates below modern freshwater floating marshes. The presence of a Trochammina assemblage has aided recognition of a maximum flooding (transgression) surface below the base of an incised paleovalley, interpreted as a type 1 sequence boundary, in the Bonar cyclothem of the Sydney Basin. The valley incision is attributed to glacioeustatic sea-level lowering. The upper 10m of the 25m thick valley fill contains assemblages of Difflugia, which are succeeded by Trochammina assemblages within the seat earth beneath the coal at the top of the cyclothem.

  12. Glycodendrimersomes from Sequence-Defined Janus Glycodendrimers Reveal High Activity and Sensor Capacity for the Agglutination by Natural Variants of Human Lectins.

    PubMed

    Zhang, Shaodong; Xiao, Qi; Sherman, Samuel E; Muncan, Adam; Ramos Vicente, Andrea D M; Wang, Zhichun; Hammer, Daniel A; Williams, Dewight; Chen, Yingchao; Pochan, Darrin J; Vértesy, Sabine; André, Sabine; Klein, Michael L; Gabius, Hans-Joachim; Percec, Virgil

    2015-10-21

    A library of eight amphiphilic Janus glycodendrimers (Janus-GDs) presenting D-lactose (Lac) and a combination of Lac with up to eight methoxytriethoxy (3EO) units in a sequence-defined arrangement was synthesized via an iterative modular methodology. The length of the linker between Lac and the hydrophobic part of the Janus-GDs was also varied. Self-assembly by injection from THF solution into phosphate-buffered saline led to unilamellar, monodisperse glycodendrimersomes (GDSs) with dimensions predicted by Janus-GD concentration. These GDSs provided a toolbox to measure bioactivity profiles in agglutination assays with sugar-binding proteins (lectins). Three naturally occurring forms of the human adhesion/growth-regulatory lectin galectin-8, Gal-8S and Gal-8L, which differ by the length of linker connecting their two active domains, and a single amino acid mutant (F19Y), were used as probes to study activity and sensor capacity. Unpredictably, the sequence of Lac on the Janus-GDs was demonstrated to determine bioactivity, with the highest level revealed for a Janus-GD with six 3EO groups and one Lac. A further increase in Lac density was invariably accompanied by a substantial decrease in agglutination, whereas a decrease in Lac density resulted in similar or lower bioactivity and sensor capacity. Both changes in topology of Lac presentation of the GDSs and seemingly subtle alterations in protein structure resulted in different levels of bioactivity, demonstrating the presence of regulation on both GDS surface and lectin. These results illustrate the applicability of Janus-GDs to dissect structure-activity relationships between programmable cell surface models and human lectins in a highly sensitive and physiologically relevant manner.

  13. Fermi-LAT, FACT, MAGIC and VERITAS detection of increasing gamma-ray activity from the high-energy peaked BL Lac object 1ES 1959+650

    NASA Astrophysics Data System (ADS)

    Buson, S.; Magill, J. D.; Dorner, D.; Biland, A.; Mirzoyan, R.; Mukherjee, R.

    2016-04-01

    The Fermi-LAT, FACT, MAGIC and VERITAS collaborations report the detection of enhanced gamma-ray activity from a source positionally consistent with the very-high-energy peaked BL Lac object 1ES 1959+650 (a.k.a 3FGL J2000.0+6509, in the 3rd LAT source catalog, 3FGL, Acero et al. 2015, ApJS 218, 23) with radio coordinates (J2000) R.A.: 299.999384 deg, Dec.: 65.148514 deg (Beasley et al. 2002, ApJS, 141, 13). This source has a redshift z=0.047 (Schachter et al. 1993, ApJ, 412, 541).

  14. Comparison of counter-immunoelectrophoresis with other serological tests in the diagnosis of human brucellosis

    PubMed Central

    Díaz, R.; Maravi-Poma, E.; Rivero, A.

    1976-01-01

    Sera from 65 persons with clinical brucellosis were employed in a comparison of standard and rapid serological tests. The results obtained with the Rose Bengal test correlated very well with those of the standard tube agglutination test, whereas results with the rapid plate agglutination test and the Coombs (antiglobulin) test were inferior. Absorption of patients' sera with specific anti-human immunoglobulin sera showed that IgM was active in the Rose Bengal test but not in the Coombs test, whereas IgG and IgA were active in both tests. In addition to the A & M antigen, which plays the most important role in the agglutination, Rose Bengal, and Coombs tests, other antigenic fractions of Brucella were examined in precipitation tests. A protein antigen reacted with 94% of the sera in counter-immunoelectrophoresis. On the basis of the results with both groups of sera, the Rose Bengal test and counter-immunoelectrophoresis appear to be the most promising methods for diagnosing clinical brucellosis. The tests differ qualitatively since different Brucella antigens are employed. PMID:791532

  15. First Fermi LAT detection of a strong GeV gamma-ray flare from blazar PKS 0403-13

    NASA Astrophysics Data System (ADS)

    Ciprini, Stefano

    2016-07-01

    The Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, has observed increasing gamma-ray flux from a source positionally consistent with the flat spectrum radio quasar PKS 0403-13 (also known as TXS 0403-132, OF -105, RX J0405.5-1308, and 3FGL J0405.5-1307), with radio counterpart position R.A.: 61.391680 deg, Dec.: -13.137136 deg (J2000.0, Fey et al. 2004, AJ, 127, 3587) and with redshift z=0.5706+/-0.0001 (Marziani et al. 1996, ApJS, 104, 37). Preliminary analysis indicates that on 2016 July 11, PKS 0403-13 was in a high state with a daily averaged gamma-ray flux (E > 100 MeV) of (1.6+/-0.3) X 10^-6 photons cm^-2 s^-1 (statistical uncertainty only), about 140 times greater than its four-year average flux reported in the third Fermi-LAT source catalog (3FGL, Acero et al. 2015, ApJS, 218, 23). The corresponding daily averaged spectral photon index (E > 100 MeV) of 2.3+/-0.2 (statistical uncertainty only) is compatible with the 3FGL catalog value of 2.35+/-0.11.

  16. Search for Gamma-Ray Emission from AE Aquarii with Seven Years of Fermi-LAT Observations

    NASA Astrophysics Data System (ADS)

    Li, Jian; Torres, Diego F.; Rea, Nanda; de Oña Wilhelmi, Emma; Papitto, Alessandro; Hou, Xian; Mauche, Christopher W.

    2016-11-01

    AE Aquarii (AE Aqr) is a cataclysmic binary hosting one of the fastest rotating ({P}{spin} = 33.08 s) white dwarfs (WDs) known. Based on seven years of Fermi Large Area Telescope (LAT) Pass 8 data, we report on a deep search for gamma-ray emission from AE Aqr. Using X-ray observations from ASCA, XMM-Newton, Chandra, Swift, Suzaku, and NuSTAR, spanning 20 years, we substantially extend and improve the spin ephemeris of AE Aqr. Using this ephemeris, we searched for gamma-ray pulsations at the spin period of the WD. No gamma-ray pulsations were detected above 3σ significance. Neither phase-averaged gamma-ray emission nor gamma-ray variability of AE Aqr is detected by Fermi LAT. We impose the most restrictive upper limit to the gamma-ray flux from AE Aqr to date: 1.3× {10}-12 erg cm-2 s-1 in the 100 MeV-300 GeV energy range, providing constraints on models.

  17. Fermi-LAT Detection of Gravitational Lens Delayed Gamma-Ray Flares from Blazar B0218+357

    NASA Technical Reports Server (NTRS)

    Cheung, C. C.; Larsson, S.; Scargle, J. D.; Amin, M. A.; Blandford, R. D.; Bulmash, D.; Chiang, J.; Ciprini, S.; Corbet, R. D. H.; Falco, E. E.; Marshall, P. J.; Wood, D. L.; Ajello, M.; Bastieri, D.; Chekhtman, A.; D'Ammando, F.; Giroletti, M.; Grove, J. E.; Lott, B.; Ohja, R.; Orienti, M.; Perkins, J. S.; Razzano, M.; Smith, A. W.; Thompson, D. J.; Wood, K. S.

    2014-01-01

    Using data from the Fermi Large Area Telescope (LAT), we report the first clear gamma-ray measurement of a delay between flares from the gravitationally lensed images of a blazar. The delay was detected in B0218+357, a known double-image lensed system, during a period of enhanced gamma-ray activity with peak fluxes consistently observed to reach greater than 20-50 times its previous average flux. An auto-correlation function analysis identified a delay in the gamma-ray data of 11.46 plus or minus 0.16 days (1 sigma) that is approximately 1 day greater than previous radio measurements. Considering that it is beyond the capabilities of the LAT to spatially resolve the two images, we nevertheless decomposed individual sequences of superposing gamma-ray flares/delayed emissions. In three such approximately 8-10 day-long sequences within an approximately 4-month span, considering confusion due to overlapping flaring emission and flux measurement uncertainties, we found flux ratios consistent with approximately 1, thus systematically smaller than those from radio observations. During the first, best-defined flare, the delayed emission was detailed with a Fermi pointing, and we observed flux doubling timescales of approximately 3-6 hours implying as well extremely compact gamma-ray emitting regions.

  18. A Search for Transitions between States in Redbacks and Black Widows Using Seven Years of Fermi-LAT Observations

    NASA Astrophysics Data System (ADS)

    Torres, Diego F.; Ji, Long; Li, Jian; Papitto, Alessandro; Rea, Nanda; de Oña Wilhelmi, Emma; Zhang, Shu

    2017-02-01

    Considering about seven years of Fermi-Large Area Telescope (LAT) data, we present a systematic search for variability that is possibly related to transitions between states in redbacks and black widow systems. The transitions are characterized by sudden and significant changes in the gamma-ray flux that persist on a timescale that is much larger than the orbital period. This phenomenology was already detected in the case of two redback systems, PSR J1023+0038 and PSR J1227‑4853, which we present here. We show the existence of only one transition for each of these systems over the past seven years. We determine their spectra, establishing high-energy cutoffs at a few GeV for the high gamma-ray state of PSR J1023+0038, and for both states of PSR J1227‑4853. The surveying capability of the Fermi-LAT allows further study of whether similar phenomenology has occurred in other sources. Although we have not found any evidence of a state transition for most of the studied pulsars, we note two black-widow systems, PSR J2234+0944 and PSR J1446‑4701, whose apparent variabilities are reminiscent of the transitions in PSR J1023+0038 and PSR J1227‑4853. For the other systems, we set limits on potential transitions in their measured gamma-ray light curves.

  19. Fermi-LAT γ-ray anisotropy and intensity explained by unresolved radio-loud active galactic nuclei

    NASA Astrophysics Data System (ADS)

    Di Mauro, Mattia; Cuoco, Alessandro; Donato, Fiorenza; Siegal-Gaskins, Jennifer M.

    2014-11-01

    Radio-loud active galactic nuclei (AGN) are expected to contribute substantially to both the intensity and anisotropy of the isotropic γ-ray background (IGRB). In turn, the measured properties of the IGRB can be used to constrain the characteristics of proposed contributing source classes. We consider individual subclasses of radio-loud AGN, including low-, intermediate-, and high-synchrotron-peaked BL Lacertae objects, flat-spectrum radio quasars, and misaligned AGN. Using updated models of the γ-ray luminosity functions of these populations, we evaluate the energy-dependent contribution of each source class to the intensity and anisotropy of the IGRB. We find that collectively radio-loud AGN can account for the entirety of the IGRB intensity and anisotropy as measured by the Fermi Large Area Telescope (LAT). Misaligned AGN provide the bulk of the measured intensity but a negligible contribution to the anisotropy, while high-synchrotron-peaked BL Lacertae objects provide the dominant contribution to the anisotropy. In anticipation of upcoming measurements with the Fermi-LAT and the forthcoming Cherenkov Telescope Array, we predict the anisotropy in the broader energy range that will be accessible to future observations.

  20. Fermi LAT detection of an increase in gamma-ray activity of the FSRQ S5 1044+71

    NASA Astrophysics Data System (ADS)

    Ojha, Roopesh; Carpen, Bryce

    2017-01-01

    The Large Area Telescope (LAT), on board the Fermi Gamma-ray Space Telescope, has observed gamma-ray flaring activity from a source positionally consistent with the flat spectrum radio quasar S5 1044+71 (also known as 3FGL J1048.4+7144, Acero et al. 2015, ApJS 218, 23) with radio coordinates R.A: 10h48m27.6199s, Dec: +71d43m35.938s (J2000; Johnston et al. 1995, AJ, 110, 880) and redshift z=1.15 (Polatidis et al. 1995, ApJS, 98, 1). Preliminary results indicate that S5 1044+71 showed a marked increase in activity on 2016 December 29, with a daily flux (E > 100 MeV) of (1.1+/-0.2) x10^-6 ph cm^-2 s^-1 (errors are statistical only) which is a factor of about 16 greater than the average flux reported in the third Fermi LAT catalog (3FGL).

  1. Observations and Interpretation of Behind the Limb Solar Flares Detected by Fermi-LAT and Other Instruments

    NASA Astrophysics Data System (ADS)

    Petrosian, Vahe; Omodei, Nicola; Pesce-Rollins, Melissa; Rubio da Costa, Fatima; Liu, Wei

    2015-04-01

    The Fermi Large Area Telescope (LAT) is the most sensitive instrument ever deployed in space for observing > 30 MeV gamma-rays. During the past active period of the Sun the LAT has detected more than 40 flares up to GeV energies some of which occur behind the limb as determined by STEREO observations. We will present the observations on two such flares with significant flux of > 100 MeV (and some indication of 1 to 10 MeV detected by Fermi-GBM) gamma-rays coming from the visible disk while the flare and associated CMEs are initiated in active regions tens of degrees behind the visible limb of the Sun. We will consider acceleration of particles, their transport and radiative signatures, and the transfer of these radiation in the solar atmosphere to distinguish between (i) acceleration in the low corona, in a high corona trap, and/or in the CME driven shock; (ii) between continuous and prompt acceleration; and (iii) between electron bremsstrahlung and decay of pions produced by accelerated ions.

  2. Fermi-LAT detection of a GeV gamma-ray flare from the blazar PKS 2023-07

    NASA Astrophysics Data System (ADS)

    Ciprini, Stefano; Fermi Large Area Telescope Collaboration

    2016-04-01

    The Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, has observed increasing gamma-ray flux from a source positionally consistent with the flat spectrum radio quasar PKS 2023-07 (also known as NRAO 629, TXS 2022-077, 3EG J2025-0744, 1AGLR J2027-0747 and 3FGL J2025.6-0736), with radio counterpart position R.A.: 306.419418 deg, Dec.: -7.597969 deg (J2000.0, Beasley et al. 2002, ApJS, 141, 13) and with redshift z=1.388 (Drinkwater et al. 1997, MNRAS, 284, 85). Preliminary analysis indicates that on 2016 April 9, PKS 2023-07 was in a high state with a daily averaged gamma-ray flux (E > 100 MeV) of (2.0+/-0.3) X 10^-6 photons cm^-2 s^-1 (statistical uncertainty only), about 16 times greater than its four-year average flux reported in the third Fermi-LAT source catalog (3FGL, Acero et al. 2015, ApJS, 218, 23). The corresponding daily averaged spectral photon index (E > 100 MeV) of 2.4+/-0.2 (statistical uncertainty only) is compatible with the 3FGL catalog value of 2.18+/-0.03.

  3. A Statistical Approach to Recognizing Source Classes for Unassociated Sources in the First FERMI-LAT Catalog

    NASA Technical Reports Server (NTRS)

    Ackermann, M.; Ajello, M.; Allafort, A.; Antolini, E.; Baldini, L.; Ballet, J.; Barbiellini, G.; Bastieri, D.; Bellazzini, R.; Berenji, B.; Blandford, R. D.; Bloom, E. D.; Bonamente, E.; Borgland, A. W.; Bouvier, A.; Brandt, T. J.; Celik, O.; DeCesar, M. E.; Ferrara, E. C.; Gehrels, N.; Harding, A.K.; Hays, E.; McEnery, J. E.; Thompson, D. J.; Troja, E.

    2012-01-01

    The Fermi Large Area Telescope (LAT) First Source Catalog (1FGL) provided spatial, spectral, and temporal properties for a large number of gamma -ray sources using a uniform analysis method. After correlating with the mostcomplete catalogs of source types known to emit gamma rays, 630 of these sources are "unassociated" (i.e., have no obvious counterparts at other wavelengths). Here, we employ two statistical analyses of the primary gamma-ray characteristics for these unassociated sources in an effort to correlate their gamma-ray properties with the active galactic nucleus (AGN) and pulsar populations in 1FGL. Based on the correlation results, we classify 221 AGN-like and 134 pulsar-like sources in the 1FGL unassociated sources. The results of these source "classifications" appear to match the expected source distributions, especially at high Galactic latitudes. While useful for planning future multiwavelength follow-up observations, these analyses use limited inputs, and their predictions should not be considered equivalent to "probable source classes" for these sources. We discuss multiwavelength results and catalog cross-correlations to date, and provide new source associations for 229 Fermi-LAT sources that had no association listed in the 1FGL catalog. By validating the source classifications against these new associations, we find that the new association matches the predicted source class in approximately 80% of the sources.

  4. Chandra X-Ray Observations of the Two Brightest Unidentified High Galactic Latitude Fermi-LAT Gamma-Ray Sources

    NASA Technical Reports Server (NTRS)

    Cheung, C. C.; Donato, D.; Gehrels, N.; Sokolovsky, K. V.; Giroletti, M.

    2012-01-01

    We present Chandra ACIS-I X-ray observations of 0FGL J1311.9-3419 and 0FGL J1653.4-0200, the two brightest high Galactic latitude (absolute value (beta) >10 deg) gamma-ray sources from the three-month Fermi Large Area Telescope (LAT) bright source list that are still unidentified. Both were also detected previously by EGRET, and despite dedicated multi-wavelength follow-up, they are still not associated with established classes of gamma-ray emitters like pulsars or radio-loud active galactic nuclei. X-ray sources found in the ACIS-I fields of view are cataloged, and their basic properties are determined. These are discussed as candidate counterparts to 0FGL J1311.9-3419 and 0FGL J1653.4-0200, with particular emphasis on the brightest of the 9 and 13 Chandra sources detected within the respective Fermi-LAT 95% confidence regions. Further follow-up studies, including optical photometric and spectroscopic observations, are necessary to identify these X-ray candidate counterparts in order to ultimately reveal the nature of these enigmatic gamma-ray objects.

  5. Latex agglutination assays for detection and of non-O157 Shiga toxin-producing E. coli serogroups O26, O45, O103, O111, O121 and O145

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Latex agglutination assays were developed for the top six non-O157 Shiga toxin-producing Escherichia coli (STEC) serogroups utilizing polyclonal antibodies. Rabbit antisera were affinity purified through Protein A/G columns and the isolated immunoglobulins (IgG) were covalently immobilized onto pol...

  6. False-positive cryptococcal antigen test associated with use of BBL Port-a-Cul transport vials.

    PubMed

    Wilson, Deborah A; Sholtis, Mary; Parshall, Sharon; Hall, Gerri S; Procop, Gary W

    2011-02-01

    A total of 52 residual CSF and serum specimens, which were originally negative with the Cryptococcal Antigen Latex Agglutination System (CALAS), were shown to become falsely positive after placement in BBL Port-A-Cul anaerobic transport vials. This transport device, although excellent for specimen transportation for subsequent culture, should not be used if cryptococcal antigen testing is needed.

  7. Planck Lensing and Cosmic Infrared Background Cross-correlation with Fermi-LAT: Tracing Dark Matter Signals in the Gamma-ray Background

    NASA Astrophysics Data System (ADS)

    Feng, Chang; Cooray, Asantha; Keating, Brian

    2017-02-01

    The extragalactic γ-ray background and its spatial anisotropy could potentially contain a signature of dark matter (DM) annihilation or particle decay. Astrophysical foregrounds, such as blazars and star-forming galaxies (SFGs), however, dominate the γ-ray background, precluding an easy detection of the signal associated with the DM annihilation or decay in the background intensity spectrum. The DM imprint on the γ-ray background is expected to be correlated with large-scale structure tracers. In some cases, such a cross-correlation is even expected to have a higher signal-to-noise ratio than the auto-correlation. One reliable tracer of the DM distribution in the large-scale structure is lensing of the cosmic microwave background (CMB), and the cosmic infrared background (CIB) is a reliable tracer of SFGs. We analyze Fermi-LAT data taken over 92 months and study the cross-correlation with Planck CMB lensing, Planck CIB, and Fermi-γ maps. We put upper limits on the DM annihilation cross-section from the cross-power spectra with the γ-ray background anisotropies. The unbiased power spectrum estimation is validated with simulations that include cross-correlated signals. We also provide a set of systematic tests and show that no significant contaminations are found for the measurements presented here. Using γ-ray background map from data gathered over 92 months, we find the best constraint on the DM annihilation with a 1σ confidence level upper limit of 10‑25–10‑24 cm3 s‑1, when the mass of DM particles is between 20 and 100 GeV.

  8. Fermi/LAT Observations of Swift/BAT Seyfert Galaxies: On the Contribution of Radio-Quiet Active Galactic Nuclei to the Extragalactic gamma-Ray Background

    NASA Technical Reports Server (NTRS)

    Teng, Stacy H.; Mushotzky, Richard F.; Sambruna, Rita M.; Davis, David S.; Reynolds, Christopher S.

    2011-01-01

    We present the analysis of 2.1 years of Fermi Large Area Telescope (LAT) data on 491 Seyfert galaxies detected by the Swift Burst Alert Telescope (BAT) survey. Only the two nearest objects, NGC 1068 and NGC 4945, which were identified in the Fermi first year catalog, are detected. Using Swift/BAT and radio 20 cm fluxes, we define a new radio-loudness parameter R(sub X,BAT) where radio-loud objects have logR(sub X,BAT) > -4.7. Based on this parameter, only radio-loud sources are detected by Fermi/LAT. An upper limit to the flux of the undetected sources is derived to be approx.2x10(exp -11) photons/sq cm/s, approximately seven times lower than the observed flux of NGC 1068. Assuming a median redshift of 0.031, this implies an upper limit to the gamma-ray (1-100 GeV) luminosity of < approx.3x10(exp 41) erg/s. In addition, we identified 120 new Fermi/LAT sources near the Swift/BAT Seyfert galaxies with significant Fermi/LAT detections. A majority of these objects do not have Swift/BAT counterparts, but their possible optical counterparts include blazars, flat-spectrum radio quasars, and quasars.

  9. Fermi-LAT detection of ongoing gamma-ray activity from the new gamma-ray source Fermi J1654-1055 (PMN J1632-1052)

    NASA Astrophysics Data System (ADS)

    Kocevski, D.; Ajello, M.; Buson, S.; Buehler, R.; Giomi, M.

    2016-02-01

    During the week between February 8 and 15, 2016, the Large Area Telescope (LAT), one of the two instruments on the Fermi Gamma-ray Space Telescope, observed gamma-ray activity from a new transient source, Fermi J1654-1055.

  10. MASTER-SAAO follow-up to Fermi-LAT detection of FSRQ PKS B1035-281 activity. And OTs

    NASA Astrophysics Data System (ADS)

    Lipunov, V. M.; Buckley, D. A. H.; Shurpakov, S.; Balanutsa, P.; Gress, O.; Gorbovskoy, E.; Tiurina, N.; Kuznetsov, A.; Vladimirov, V.; Kornilov, V.; Vlasenko, D.; Gorbunov, I.; Popova, E.; Kuvshinov, D.; Kniazev, A.; Potter, S. B.; Kotze, M.; Rebolo, R.; Ricart, M. Serra; Israelian, G.; Lodieu, N.

    2016-02-01

    MASTER-SAAO auto-detection system (Lipunov et al., "MASTER Global Robotic Net", Advances in Astronomy, 2010, 349171 ) detected the brightening of the FSRQ PKS B1035-281 (RA=10 37 42.457 -28 23 04.11) during inspection of Fermi-LAT Detection of its unusual hard spectrum (Carpenter et al., ATEL #8740).

  11. Constraining Gamma-Ray Emission from Luminous Infrared Galaxies with Fermi-LAT; Tentative Detection of Arp 220

    NASA Astrophysics Data System (ADS)

    Griffin, Rhiannon D.; Dai, Xinyu; Thompson, Todd A.

    2016-05-01

    Star-forming galaxies produce gamma-rays primarily via pion production, resulting from inelastic collisions between cosmic-ray protons and the interstellar medium (ISM). The dense ISM and high star formation rates of luminous and ultra-luminous infrared galaxies (LIRGs and ULIRGs) imply that they should be strong gamma-ray emitters, but so far only two LIRGs have been detected. Theoretical models for their emission depend on the unknown fraction of cosmic-ray protons that escape these galaxies before interacting. We analyze Fermi-LAT data for 82 of the brightest Infrared Astronomical Satellite LIRGs and ULIRGs. We examine each system individually and carry out a stacking analysis to constrain their gamma-ray fluxes. We report the detection of the nearest ULIRG Arp 220 (˜4.6σ). We observe a gamma-ray flux (0.8-100 GeV) of 2.4 × 10-10 phot cm-2 s-1 with a photon index of 2.23 (8.2 × 1041 erg s-1 at 77 Mpc). We also derive upper limits (ULs) for the stacked LIRGs and ULIRGs. The gamma-ray luminosity of Arp 220 and the stacked ULs agree with calorimetric predictions for dense star-forming galaxies. With the detection of Arp 220, we extend the gamma-ray-IR luminosity correlation to the high-luminosity regime with {log}{L}0.1-100{GeV}=1.25× {log}{L}8-1000μ {{m}}+26.7 as well as the gamma-ray-radio continuum luminosity correlation with {log}{L}0.1-100{GeV}=1.22× {log}{L}1.4{GHz}+13.3. The current survey of Fermi-LAT is on the verge of detecting more LIRGs/ULIRGs in the local universe, and we expect even more detections with deeper Fermi-LAT observations or the next generation of gamma-ray detectors.

  12. FERMI-LAT OBSERVATIONS OF THE DIFFUSE {gamma}-RAY EMISSION: IMPLICATIONS FOR COSMIC RAYS AND THE INTERSTELLAR MEDIUM

    SciTech Connect

    Ackermann, M.; Ajello, M.; Bechtol, K.; Berenji, B.; Blandford, R. D.; Bloom, E. D.; Borgland, A. W.; Buehler, R.; Atwood, W. B.; Baldini, L.; Bellazzini, R.; Bregeon, J.; Ballet, J.; Bastieri, D.; Buson, S.; Bonamente, E.; Brandt, T. J.; Brigida, M.; Bruel, P. E-mail: gudlaugu@glast2.stanford.edu [Laboratoire Leprince-Ringuet, Ecole polytechnique, CNRS and others

    2012-05-01

    The {gamma}-ray sky >100 MeV is dominated by the diffuse emissions from interactions of cosmic rays with the interstellar gas and radiation fields of the Milky Way. Observations of these diffuse emissions provide a tool to study cosmic-ray origin and propagation, and the interstellar medium. We present measurements from the first 21 months of the Fermi Large Area Telescope (Fermi-LAT) mission and compare with models of the diffuse {gamma}-ray emission generated using the GALPROP code. The models are fitted to cosmic-ray data and incorporate astrophysical input for the distribution of cosmic-ray sources, interstellar gas, and radiation fields. To assess uncertainties associated with the astrophysical input, a grid of models is created by varying within observational limits the distribution of cosmic-ray sources, the size of the cosmic-ray confinement volume (halo), and the distribution of interstellar gas. An all-sky maximum-likelihood fit is used to determine the X{sub CO} factor, the ratio between integrated CO-line intensity and H{sub 2} column density, the fluxes and spectra of the {gamma}-ray point sources from the first Fermi-LAT catalog, and the intensity and spectrum of the isotropic background including residual cosmic rays that were misclassified as {gamma}-rays, all of which have some dependency on the assumed diffuse emission model. The models are compared on the basis of their maximum-likelihood ratios as well as spectra, longitude, and latitude profiles. We also provide residual maps for the data following subtraction of the diffuse emission models. The models are consistent with the data at high and intermediate latitudes but underpredict the data in the inner Galaxy for energies above a few GeV. Possible explanations for this discrepancy are discussed, including the contribution by undetected point-source populations and spectral variations of cosmic rays throughout the Galaxy. In the outer Galaxy, we find that the data prefer models with a flatter

  13. miR-107 and miR-25 simultaneously target LATS2 and regulate proliferation and invasion of gastric adenocarcinoma (GAC) cells

    SciTech Connect

    Zhang, Mingjun; Wang, Xiaolei; Li, Wanhu; Cui, Yongchun

    2015-05-08

    Although a series of oncogenes and tumor suppressors were identified in the pathological development of gastric adenocarcinoma (GAC), the underlying molecule mechanism were still not fully understood. The current study explored the expression profile of miR-107 and miR-25 in GAC patients and their downstream regulative network. qRT-PCR analysis was performed to quantify the expression of these two miRNAs in serum samples from both patients and healthy controls. Dual luciferase assay was conducted to verify their putative bindings with LATS2. MTT assay, cell cycle assay and transwell assay were performed to explore how miR-107 and miR-25 regulate proliferation and invasion of gastric cancer cells. Findings of this study demonstrated that total miR-107 or miR-25 expression might be overexpressed in gastric cancer patients and they can simultaneously and synchronically regulate LATS2 expression, thereby affecting gastric cancer cell growth and invasion. Therefore, the miR-25/miR-107-LATS2 axis might play an important role in proliferation and invasion of the gastric cancer cells. - Highlights: • Total miR-107 and miR-25 expression is significantly increased in GAC patients. • Both miR-107 and miR-25 can promote proliferation and invasion of GAC cells. • Both miR-107 and miR-25 can target LATS2 and regulate its expression. • miR-107 and miR-25 regulate proliferation and invasion of GAC cells though LATS2.

  14. A Potential of an Anti-HTLV-I gp46 Neutralizing Monoclonal Antibody (LAT-27) for Passive Immunization against Both Horizontal and Mother-to-Child Vertical Infection with Human T Cell Leukemia Virus Type-I.

    PubMed

    Fujii, Hideki; Shimizu, Mamoru; Miyagi, Takuya; Kunihiro, Marie; Tanaka, Reiko; Takahashi, Yoshiaki; Tanaka, Yuetsu

    2016-02-03

    Although the number of human T-cell leukemia virus type-I (HTLV-I)-infected individuals in the world has been estimated at over 10 million, no prophylaxis vaccines against HTLV-I infection are available. In this study, we took a new approach for establishing the basis of protective vaccines against HTLV-I. We show here the potential of a passively administered HTLV-I neutralizing monoclonal antibody of rat origin (LAT-27) that recognizes epitopes consisting of the HTLV-I gp46 amino acids 191-196. LAT-27 completely blocked HTLV-I infection in vitro at a minimum concentration of 5 μg/mL. Neonatal rats born to mother rats pre-infused with LAT-27 were shown to have acquired a large quantity of LAT-27, and these newborns showed complete resistance against intraperitoneal infection with HTLV-I. On the other hand, when humanized immunodeficient mice were pre-infused intravenously with humanized LAT-27 (hu-LAT-27), all the mice completely resisted HTLV-I infection. These results indicate that hu-LAT-27 may have a potential for passive immunization against both horizontal and mother-to-child vertical infection with HTLV-I.

  15. DUB3 Deubiquitylating Enzymes Regulate Hippo Pathway Activity by Regulating the Stability of ITCH, LATS and AMOT Proteins.

    PubMed

    Nguyen, Hung Thanh; Kugler, Jan-Michael; Cohen, Stephen M

    2017-01-01

    The YAP and TAZ transcriptional coactivators promote oncogenic transformation. Elevated YAP/TAZ activity has been documented in human tumors. YAP and TAZ are negatively regulated by the Hippo tumor suppressor pathway. The activity and stability of several Hippo pathway components, including YAP/TAZ, is regulated by ubiquitin mediated protein turnover and several ubiquitin ligase complexes have been implicated in human cancer. However, little is known about the deubiquitylating enzymes that counteract these ubiquitin ligases in regulation of the Hippo pathway. Here we identify the DUB3 family deubiquitylating enzymes as regulators of Hippo pathway activity. We provide evidence that DUB3 proteins regulate YAP/TAZ activity by controlling the stability of the E3 ligase ITCH, the LATS kinases and the AMOT family proteins. As a novel Hippo pathway regulator, DUB3 has the potential to act a tumor suppressor by limiting YAP activity.

  16. Search for Gamma-ray-emitting Active Galactic Nuclei in the Fermi-LAT Unassociated Sample Using Machine Learning

    NASA Astrophysics Data System (ADS)

    Doert, M.; Errando, M.

    2014-02-01

    The second Fermi-LAT source catalog (2FGL) is the deepest all-sky survey available in the gamma-ray band. It contains 1873 sources, of which 576 remain unassociated. Machine-learning algorithms can be trained on the gamma-ray properties of known active galactic nuclei (AGNs) to find objects with AGN-like properties in the unassociated sample. This analysis finds 231 high-confidence AGN candidates, with increased robustness provided by intersecting two complementary algorithms. A method to estimate the performance of the classification algorithm is also presented, that takes into account the differences between associated and unassociated gamma-ray sources. Follow-up observations targeting AGN candidates, or studies of multiwavelength archival data, will reduce the number of unassociated gamma-ray sources and contribute to a more complete characterization of the population of gamma-ray emitting AGNs.

  17. DUB3 Deubiquitylating Enzymes Regulate Hippo Pathway Activity by Regulating the Stability of ITCH, LATS and AMOT Proteins

    PubMed Central

    2017-01-01

    The YAP and TAZ transcriptional coactivators promote oncogenic transformation. Elevated YAP/TAZ activity has been documented in human tumors. YAP and TAZ are negatively regulated by the Hippo tumor suppressor pathway. The activity and stability of several Hippo pathway components, including YAP/TAZ, is regulated by ubiquitin mediated protein turnover and several ubiquitin ligase complexes have been implicated in human cancer. However, little is known about the deubiquitylating enzymes that counteract these ubiquitin ligases in regulation of the Hippo pathway. Here we identify the DUB3 family deubiquitylating enzymes as regulators of Hippo pathway activity. We provide evidence that DUB3 proteins regulate YAP/TAZ activity by controlling the stability of the E3 ligase ITCH, the LATS kinases and the AMOT family proteins. As a novel Hippo pathway regulator, DUB3 has the potential to act a tumor suppressor by limiting YAP activity. PMID:28061504

  18. Search for gamma-ray-emitting active galactic nuclei in the Fermi-LAT unassociated sample using machine learning

    SciTech Connect

    Doert, M.; Errando, M. E-mail: errando@astro.columbia.edu

    2014-02-10

    The second Fermi-LAT source catalog (2FGL) is the deepest all-sky survey available in the gamma-ray band. It contains 1873 sources, of which 576 remain unassociated. Machine-learning algorithms can be trained on the gamma-ray properties of known active galactic nuclei (AGNs) to find objects with AGN-like properties in the unassociated sample. This analysis finds 231 high-confidence AGN candidates, with increased robustness provided by intersecting two complementary algorithms. A method to estimate the performance of the classification algorithm is also presented, that takes into account the differences between associated and unassociated gamma-ray sources. Follow-up observations targeting AGN candidates, or studies of multiwavelength archival data, will reduce the number of unassociated gamma-ray sources and contribute to a more complete characterization of the population of gamma-ray emitting AGNs.

  19. The spectral energy distribution of the core of Cen A with H.E.S.S. and Fermi-LAT

    NASA Astrophysics Data System (ADS)

    Magill, Jeff; Prokhorov, Dmitry; Becherini, Yvonne; Buson, Sara; Gasparini, Dario; Perkins, Jeremy; Tanaka, Yasuyuki; H. E. S. S. Collaboration; Fermi-LAT Collaboration

    2017-01-01

    Cen A, the nearest radio galaxy, was detected as a faint emitter of very high energy (VHE) gamma rays by the H.E.S.S. telescopes in Namibia. The flux derived from the H.E.S.S. data is much higher than that expected from a single zone synchrotron self-Compton model, which adequately describes the emission from Cen A at lower frequencies. New observations with H.E.S.S. were performed to clarify the spectral characteristics of the VHE emission from Cen A. We report the results of the analysis of the complete H.E.S.S. dataset with twice the live time of the previously published spectrum and an update of the Cen A spectrum obtained with Fermi-LAT at GeV energies.

  20. FERMI LAT DISCOVERY OF EXTENDED GAMMA-RAY EMISSIONS IN THE VICINITY OF THE HB 3 SUPERNOVA REMNANT

    SciTech Connect

    Katagiri, H.; Yoshida, K.; Ballet, J.; Hewitt, J. W.; Kubo, H. E-mail: 13nm169s@gmail.com

    2016-02-20

    We report the discovery of extended gamma-ray emission measured by the Large Area Telescope (LAT) onboard the Fermi Gamma-ray Space Telescope in the region of the supernova remnant (SNR) HB 3 (G132.7+1.3) and the W3 II complex adjacent to the southeast of the remnant. W3 is spatially associated with bright {sup 12}CO (J = 1–0) emission. The gamma-ray emission is spatially correlated with this gas and the SNR. We discuss the possibility that gamma rays originate in interactions between particles accelerated in the SNR and interstellar gas or radiation fields. The decay of neutral pions produced in nucleon–nucleon interactions between accelerated hadrons and interstellar gas provides a reasonable explanation for the gamma-ray emission. The emission from W3 is consistent with irradiation of the CO clouds by the cosmic rays accelerated in HB 3.

  1. The Use of Weighting in Periodicity Searches in All-Sky Monitor Data: Applications to the GLAST LAT

    SciTech Connect

    Corbet, Robin; Dubois, Richard; /SLAC

    2009-06-25

    The light curves produced by all-sky monitors, such as the Rossi X-ray Timing Explorer All-Sky Monitor and the Swift Burst Alert Telescope (BAT), generally have non-uniform error bars. In searching for periodic modulation in this type of data using power spectra it can be important to use appropriate weighting of data points to achieve the best sensitivity. It was recently demonstrated that for Swift BAT data a simple weighting scheme can actually sometimes reduce the sensitivity of the power spectrum depending on source brightness. Instead, a modified weighting scheme, based on the Cochran semi-weighted mean, gives improved results independent of source brightness. We investigate the benefits of weighting power spectra in period searches using simulated GLAST LAT observations of {gamma}-ray binaries.

  2. Compton-Pair Production Space Telescope: Extending Fermi-LAT Discoveries into MeV Gamma-ray Astronomy

    NASA Astrophysics Data System (ADS)

    Smith, Andrew; ComPair Team

    2016-03-01

    The keV-MeV gamma-ray energy range has remained largely unexplored over the last decade despite offering an exciting window into many astrophysical questions. This energy range is particularly challenging because it is firmly in the Compton-dominated regime where the interaction cross section is minimized. We are developing a MIDEX-scale wide-aperture discovery mission, Compton-Pair Production Space Telescope (ComPair), to investigate the energy range from 200 keV to >500 MeV with good energy and angular resolution and with sensitivity approaching a factor of 20-50 better than previous instruments. ComPair will build on the heritage of successful space missions including Fermi-LAT, AGILE, AMS and PAMELA, and will use well-developed space-qualified detector technologies including Si-strip and CdZnTe-strip detectors, heavy inorganic scintillators, and plastic scintillators. on behalf of the ComPair Team.

  3. A hydrodynamical model for the Fermi-LAT γ-ray light curve of blazar PKS 1510-089

    NASA Astrophysics Data System (ADS)

    Cabrera, J. I.; Coronado, Y.; Benítez, E.; Mendoza, S.; Hiriart, D.; Sorcia, M.

    2013-12-01

    A physical description of the formation and propagation of working surfaces inside the relativistic jet of the blazar PKS 1510-089 are used to model its γ -ray variability light curve using Fermi-LAT data from 2008 to 2012. The physical model is based on conservation laws of mass and momentum at the working surface as explained by Mendoza et al. (2009). The hydrodynamical description of a working surface is parametrized by the initial velocity and mass injection rate at the base of the jet. We show that periodic variations on the injected velocity profiles are able to account for the observed luminosity, fixing model parameters such as mass ejection rates of the central engine injected at the base of the jet, oscillation frequencies of the flow and maximum Lorentz factors of the bulk flow during a particular burst.

  4. Constraints on WIMP annihilation for contracted dark matter in the inner Galaxy with the Fermi-LAT

    SciTech Connect

    Gómez-Vargas, Germán A.; Huh, Ji-Haeng; Peiró, Miguel; Cerdeño, David G.; Muñoz, Carlos; Sánchez-Conde, Miguel A.; Prada, Francisco; Morselli, Aldo; Klypin, Anatoly; Mambrini, Yann E-mail: masc@stanford.edu E-mail: miguel.peiro@uam.es E-mail: aldo.morselli@roma2.infn.it E-mail: davidg.cerdeno@uam.es E-mail: carlos.munnoz@uam.es

    2013-10-01

    We derive constraints on parameters of generic dark matter candidates by comparing theoretical predictions with the gamma-ray emission observed by the Fermi-LAT from the region around the Galactic Center. Our analysis is conservative since it simply requires that the expected dark matter signal does not exceed the observed emission. The constraints obtained in the likely case that the collapse of baryons to the Galactic Center is accompanied by the contraction of the dark matter are strong. In particular, we find that for b b-bar and τ{sup +}τ{sup −} or W{sup +}W{sup −} dark matter annihilation channels, the upper limits on the annihilation cross section imply that the thermal cross section is excluded for a Weakly Interacting Massive Particle (WIMP) mass smaller than about 700 and 500 GeV, respectively. For the μ{sup +}μ{sup −} channel, where the effect of the inverse Compton scattering is important, depending on models of the Galactic magnetic field the exclusion of the thermal cross-section is for a WIMP mass smaller than about 150 to 400 GeV. The upper limits on the annihilation cross section of dark matter particles obtained are two orders of magnitude stronger than without contraction. In the latter case our results are compatible with the upper limits from the Galactic halo analysis reported by the Fermi-LAT collaboration for the case in which the same conservative approach without modeling of the astrophysical background is employed.

  5. Discovery of Nine Gamma-Ray Pulsars in Fermi-Lat Data Using a New Blind Search Method

    NASA Technical Reports Server (NTRS)

    Celik-Tinmaz, Ozlem; Ferrara, E. C.; Pletsch, H. J.; Allen, B.; Aulbert, C.; Fehrmann, H.; Kramer, M.; Barr, E. D.; Champion, D. J.; Eatough, R. P.; Freire, P. C. C.; Reich, W.; Lyne, A. G.; Ray, P. S.

    2011-01-01

    We report the discovery of nine previously unknown gamma-ray pulsars in a blind search of data from the Fermi Large Area Telescope (LAT). The pulsars were found with a novel hierarchical search method originally developed for detecting continuous gravitational waves from rapidly rotating neutron stars. Designed to find isolated pulsars spinning at up to kHz frequencies, the new method is computationally efficient, and incorporates several advances, including a metric-based gridding of the search parameter space (frequency, frequency derivative and sky location) and the use of photon probability weights. The nine pulsars have spin frequencies between 3 and 12 Hz, and characteristic ages ranging from 17 kyr to 3 Myr. Two of them, PSRs Jl803-2149 and J2111+4606, are young and energetic Galactic-plane pulsars (spin-down power above 6 x 10(exp 35) ergs per second and ages below 100 kyr). The seven remaining pulsars, PSRs J0106+4855, J010622+3749, Jl620-4927, Jl746-3239, J2028+3332,J2030+4415, J2139+4716, are older and less energetic; two of them are located at higher Galactic latitudes (|b| greater than 10 degrees). PSR J0106+4855 has the largest characteristic age (3 Myr) and the smallest surface magnetic field (2x 10(exp 11)G) of all LAT blind-search pulsars. PSR J2139+4716 has the lowest spin-down power (3 x l0(exp 33) erg per second) among all non-recycled gamma-ray pulsars ever found. Despite extensive multi-frequency observations, only PSR J0106+4855 has detectable pulsations in the radio band. The other eight pulsars belong to the increasing population of radio-quiet gamma-ray pulsars.

  6. Probing gamma-ray emissions of Fermi-LAT pulsars with a non-stationary outer gap model

    NASA Astrophysics Data System (ADS)

    Takata, J.; Ng, C. W.; Cheng, K. S.

    2016-02-01

    We explore a non-stationary outer gap scenario for gamma-ray emission process in pulsar magnetosphere. Electrons/positrons that migrate along the magnetic field line and enter the outer gap from the outer/inner boundaries activate the pair-creation cascade and high-energy emission process. In our model, the rate of the particle injection at the gap boundaries is key physical quantity to control the gap structure and properties of the gamma-ray spectrum. Our model assumes that the injection rate is time variable and the observed gamma-ray spectrum are superposition of the emissions from different gap structures with different injection rates at the gap boundaries. The calculated spectrum superposed by assuming power law distribution of the particle injection rate can reproduce sub-exponential cut-off feature in the gamma-ray spectrum observed by Fermi-LAT. We fit the phase-averaged spectra for 43 young/middle-age pulsars and 14 millisecond pulsars with the model. Our results imply that (1) a larger particle injection at the gap boundaries is more frequent for the pulsar with a larger spin-down power and (2) outer gap with an injection rate much smaller than the Goldreich-Julian value produces observed >10 GeV emissions. Fermi-LAT gamma-ray pulsars show that (i) the observed gamma-ray spectrum below cut-off energy tends to be softer for the pulsar with a higher spin-down rate and (ii) the second peak is more prominent in higher energy bands. Based on the results of the fitting, we describe possible theoretical interpretations for these observational properties. We also briefly discuss Crab-like millisecond pulsars that show phase-aligned radio and gamma-ray pulses.

  7. Dark matter constraints from the Fermi/LAT Extragalactic Gamma-ray Background and the role of halo substructure

    NASA Astrophysics Data System (ADS)

    Sanchez-Conde, Miguel Angel

    2012-05-01

    After almost four years of operation, Fermi/LAT has measured the Extragalactic Gamma-ray Background (EGB) with unprecedented sensitivity, furthermore extending, for the first time, the EGB spectrum down to 100 MeV and up to several hundred GeV. Although a large variety of extragalactic objects are expected to contribute to the EGB, according to recent estimates the sum of their different contributions is not enough to explain the measured EGB. Gamma-rays from annihilation products of supersymmetric dark matter (DM) particles may account for this missing emission. In this talk, I will discuss on the parameter space allowed for DM annihilation in the most recent EGB spectrum by Fermi/LAT. At present, the key ingredient in the determination of the expected contribution of DM annihilation to the EGB is the so-called substructure boost factor, thus special attention will be given to this parameter. Substructure boosts are related to the amount of DM subhalos hosted by larger DM halos. Up to now, attempts to precisely calculate it both analytically and/or making use of N-body cosmological simulations have failed due to the difficulty of examining in detail the properties of the smallest DM halos. Indeed, the DM contribution to the EGB can vary over several orders of magnitude depending on the assumed DM substructure model. Here, I will present a DM substructure model which is based on our current knowledge of DM halo formation and evolution in the framework of the state-of-the-art ΛCDM cosmological model. This model makes possible to confidently calculate substructure boosts for halos of different masses. After applying it, the uncertainty bands that bracket the contribution of DM annihilation to the EGB will become not only substantially narrower but also better physically motivated. The use of such a more sophisticated DM substructure model makes possible to assess other crucial EGB aspects as well.

  8. Prevalence of agglutinating antibodies to Toxoplasma gondii in small ruminants of the Madrid region, Spain, and identification of factors influencing seropositivity by multivariate analysis.

    PubMed

    Mainar, R C; de la Cruz, C; Asensio, A; Domínguez, L; Vázquez-Boland, J A

    1996-01-01

    A seroepidemiological survey of Toxoplasma gondii infection in sheep and goats was conducted in the Madrid region of Spain. Sera were collected from 60 herds, for which farming management information and other relevant data for their characterization were also obtained through a questionnaire. The seroprevalence was 11.8% (64 out of 541), using the modified (2-mercaptoethanol) direct agglutination technique with a 1:64 cut-off titre. The relationship between seropositivity and the variables in the questionnaire was assessed by multivariate analysis. Four variables were found to be significantly associated with seroprevalence. Two of them, the presence of cats and a previous history of abortion outbreaks in the farm, were factors known to be linked with toxoplasmosis, indicating the validity of the serological data. Seropositivity was also related to a lack of replacements in the preceding year. Proximity to other farms appeared to be a protective factor negatively associated with seropositivity, probably because it was an indicator of proximity to an urban area and the availability of local sanitary facilities.

  9. Identification of an amphioxus intelectin homolog that preferably agglutinates gram-positive over gram-negative bacteria likely due to different binding capacity to LPS and PGN.

    PubMed

    Yan, Jie; Wang, Jianfeng; Zhao, Yaqi; Zhang, Jingye; Bai, Changcun; Zhang, Changqing; Zhang, Chao; Li, Kailin; Zhang, Haiqing; Du, Xiumin; Feng, Lijun

    2012-07-01

    Intelectin is a recently described galactofuranose-binding lectin that plays a role in innate immunity in vertebrates. Little is known about intelectin in invertebrates, including amphioxus, the transitional form between vertebrates and invertebrates. We cloned an amphioxus intelectin homolog, AmphiITLN-like, coding 302 amino acids with a conserved fibrinogen-related domain (FReD) in the N-terminus and an Intelectin domain in the C-terminus. In situ hybridization in adult amphioxus showed that AmphiITLN-like transcripts were highly expressed in the digestive tract and the skin. Quantitative real-time PCR revealed that AmphiITLN-like is significantly up-regulated in response to Staphylococcus aureus challenge, but only modestly to Escherichia coli. In addition, recombinant AmphiITLN-like expressed in E. coli agglutinates Gram-negative and Gram-positive bacteria to different degrees in a calcium dependent manner. Recombinant AmphiITLN-like could bind lipopolysaccharide (LPS) and peptidoglycan (PGN), the major cell wall components of Gram-negative and Gram-positive bacteria, respectively, with a higher affinity to PGN. Our work identified and characterized for the first time an amphioxus intelectin homolog, and provided insight into the evolution and function of the intelectin family.

  10. Development of the reverse passive latex agglutination method for the detection and quantification of the genus Nitrospira in the wastewater treatment process.

    PubMed

    Okumura, Takekazu; Nagai, Fumiko; Yamamoto, Shuta; Hashimoto, Toshikazu; Ito, Masahiko; Sawada, Haruji

    2008-02-01

    This report describes a new immunological method for the detection and quantification of Nitrospira populations using the reverse passive latex agglutination (RPLA). The numbers of the genus Nitrospira have been quantified only by molecular biological techniques such as FISH and quantitative PCR to date. Using high-density latex particles and a specific polyclonal antibody, Nitrospira populations in the wastewater treatment process were quantified in the shortest 4 h of incubation. The minimum detectable number of Nitrospira cells was 7.0x10(5) (log(10) 5.85) cells/ml. It is thought that the RPLA method can quantify Nitrospira populations more simply, economically, and speedily than molecular biological techniques or the culture method, because this procedure has a simple protocol and does not require the use of specialized equipment, expensive reagents, or technical skill. Therefore it is applicable for use in the everyday control and maintenance of water quality in wastewater treatment facilities where equipment is not sufficient or in the field.

  11. Evaluation of Four Whole-Cell Leptospira-Based Serological Tests for Diagnosis of Urban Leptospirosis▿

    PubMed Central

    McBride, Alan J. A.; Santos, Balbino L.; Queiroz, Adriano; Santos, Andréia C.; Hartskeerl, Rudy A.; Reis, Mitermayer G.; Ko, Albert I.

    2007-01-01

    Four serologic assays for leptospirosis had sensitivities of 72 to 88% and specificities of 88 to 100% in the setting of highly endemic urban transmission, indicating that assays using enzyme-linked immunosorbency and rapid formats may be used as alternatives to the microscopic agglutination test for diagnosing urban leptospirosis. Testing a second sample will be required in cases with an initial negative result, since sensitivity was low (46 to 68%) during the first week of illness. PMID:17652521

  12. Isolation and characterization of a 60-kilodalton salivary glycoprotein with agglutinating activity against strains of Streptococcus mutans.

    PubMed Central

    Babu, J P; Beachey, E H; Hasty, D L; Simpson, W A

    1986-01-01

    A bacterial agglutinin specific for strains of Streptococcus mutans was isolated from human saliva. Physiochemical analyses showed the agglutinin to be a glycoprotein with a molecular weight of 60,000. The agglutinin aggregated four of the eight strains of Streptococcus mutans tested but did not aggregate the strains of Streptococcus salivarius, Streptococcus sanguis, and Streptococcus mitis tested. Chemical modification of carbohydrate moieties of the agglutinin with sodium metaperiodate had no effect on aggregation, whereas modification of the polypeptide portion with trypsin abolished aggregating activity. A set of five murine hybridoma antibodies was employed to further analyze the agglutinin. Two carbohydrate-specific antibodies, directed against D-mannose and N-acetylgalactosamine moieties, respectively, failed to block agglutinin- or whole saliva-mediated aggregation of S. mutans cells. In contrast, two antibodies directed against pronase-sensitive antigenic sites blocked both agglutinin- and saliva-mediated aggregation of S. mutans cells. Western blot analysis with the agglutinin-specific hybridoma antibodies demonstrated the agglutinin in whole saliva and in artificial tooth pellicles formed on hydroxyapatite beads incubated with saliva. These results suggest that a 60-kilodalton glycoprotein of human saliva is a bacterial agglutinin with specificity for certain strains of S. mutans. They further suggest that aggregation is mediated by polypeptide rather than carbohydrate determinants of the glycoprotein. Images PMID:3002983

  13. H-deficient Bombay and para-Bombay red blood cells are most strongly agglutinated by the galactophilic lectins of Aplysia and Pseudomonas aeruginosa that detect I and P1 antigens.

    PubMed

    Gilboa-Garber, N; Sudakevitz, D; Levene, C; Rahimi-Levene, N; Yahalom, V

    2006-01-01

    The galactophilic lectins Aplysia gonad lectin (AGL) and Pseudomonas aeruginosa lectin (PA-IL), which detect human I and P1 RBC antigens, were examined for hemagglutination of H+ (group O and B) and H-deficient (Bombay and para-Bombay phenotype) RBCs. The results were compared with those obtained using two other galactophilic lectins, Maclura pomifera lectin (MPL) and Arachis hypogaea (peanut) agglutinin (PNA), which share T-antigen affinity, and two fucose-binding H-specific lectins, Ulex europaeus (UEA-I) and Pseudomonas aeruginosa lectin (PA-IIL), as well as with those achieved with anti-I serum. The results revealed that, in contrast to UEA-I and PA-IIL, which preferentially agglutinated H+ RBCs, and to MPL and PNA, which similarly agglutinated all examined RBCs, AGL, PA-IL, and the anti-I serum agglutinated the H-deficient RBCs more strongly than did the H+ RBCs. These findings could be attributed to increased levels of I and P1 antigens on those RBCs resulting from the use of the free common H-type 2 precursor for their synthesis. Since both PA-IL and PA-IIL are regarded as potential pathogen adhesins, it would be interesting to statistically compare the sensitivities of individuals of H+ and H-deficient RBC populations to P. aeruginosa infections.

  14. Implications of an astrophysical interpretation of PAMELA and Fermi-LAT data for future searches of a positron signal from dark matter annihilations

    NASA Astrophysics Data System (ADS)

    Choi, Ki-Young; Yaguna, Carlos E.

    2010-01-01

    The recent data from PAMELA and Fermi-LAT can be interpreted as evidence of new astrophysical sources of high energy positrons. In that case, such astrophysical positrons constitute an additional background against the positrons from dark matter annihilation. In this paper, we study the effect of that background on the prospects for the detection of a positron dark matter signal in future experiments. In particular, we determine the new regions in the (mass, ⟨σv⟩) plane that are detectable by the AMS-02 experiment for several dark matter scenarios and different propagation models. We find that, due to the increased background, these regions feature annihilation rates that are up to a factor of 3 larger than those obtained for the conventional background. That is, an astrophysical interpretation of the present data by PAMELA and Fermi-LAT implies that the detection of positrons from dark matter annihilation is slightly more challenging than previously believed.

  15. Quantitative proteomics analysis of signalosome dynamics in primary T cells identifies the surface receptor CD6 as a Lat adaptor-independent TCR signaling hub.

    PubMed

    Roncagalli, Romain; Hauri, Simon; Fiore, Fréderic; Liang, Yinming; Chen, Zhi; Sansoni, Amandine; Kanduri, Kartiek; Joly, Rachel; Malzac, Aurélie; Lähdesmäki, Harri; Lahesmaa, Riitta; Yamasaki, Sho; Saito, Takashi; Malissen, Marie; Aebersold, Ruedi; Gstaiger, Matthias; Malissen, Bernard

    2014-04-01

    T cell antigen receptor (TCR)-mediated activation of T cells requires the interaction of dozens of proteins. Here we used quantitative mass spectrometry and activated primary CD4(+) T cells from mice in which a tag for affinity purification was knocked into several genes to determine the composition and dynamics of multiprotein complexes that formed around the kinase Zap70 and the adaptors Lat and SLP-76. Most of the 112 high-confidence time-resolved protein interactions we observed were previously unknown. The surface receptor CD6 was able to initiate its own signaling pathway by recruiting SLP-76 and the guanine nucleotide-exchange factor Vav1 regardless of the presence of Lat. Our findings provide a more complete model of TCR signaling in which CD6 constitutes a signaling hub that contributes to the diversification of TCR signaling.

  16. Quantitative proteomic analysis of signalosome dynamics in primary T cells identifies the CD6 surface receptor as a Lat-independent TCR signaling hub

    PubMed Central

    Fiore, Fréderic; Liang, Yinming; Chen, Zhi; Sansoni, Amandine; Kanduri, Kartiek; Joly, Rachel; Malzac, Aurélie; Lähdesmäki, Harri; Lahesmaa, Riitta; Yamasaki, Sho; Saito, Takashi; Malissen, Marie; Aebersold, Ruedi; Gstaiger, Matthias; Malissen, Bernard

    2014-01-01

    T cell antigen receptor (TCR)-mediated T cell activation requires the interaction of dozens of proteins. We used quantitative mass spectrometry and activated primary CD4+ T cells from mice in which a tag for affinity purification was knocked into several genes to determine the composition and dynamics of multiprotein complexes forming around the kinase Zap70 and the adaptors Lat and SLP-76. Most of the 112 high confidence time-resolved protein interactions we observed were novel. The CD6 surface receptor was found capable of initiating its own signaling pathway by recruiting SLP-76 and Vav1, irrespective of the presence of Lat. Our findings provide a more complete model of TCR signaling in which CD6 constitutes a signaling hub contributing to TCR signal diversification. PMID:24584089

  17. Implications of the Fermi-LAT diffuse gamma-ray measurements on annihilating or decaying dark matter

    SciTech Connect

    Hütsi, Gert; Hektor, Andi; Raidal, Martti E-mail: andi.hektor@cern.ch

    2010-07-01

    We analyze the recently published Fermi-LAT diffuse gamma-ray measurements in the context of leptonically annihilating or decaying dark matter (DM) with the aim to explain simultaneously the isotropic diffuse gamma-ray and the PAMELA, Fermi and HESS (PFH) anomalous e{sup ±} data. Five different DM annihilation/decay channels 2e, 2μ, 2τ, 4e, or 4μ (the latter two via an intermediate light particle φ) are generated with PYTHIA. We calculate both the Galactic and extragalactic prompt and inverse Compton (IC) contributions to the resulting gamma-ray spectra. To find the Galactic IC spectra we use the interstellar radiation field model from the latest release of GALPROP. For the extragalactic signal we show that the amplitude of the prompt gamma-emission is very sensitive to the assumed model for the extragalactic background light. For our Galaxy we use the Einasto, NFW and cored isothermal DM density profiles and include the effects of DM substructure assuming a simple subhalo model. Our calculations show that for the annihilating DM the extragalactic gamma-ray signal can dominate only if rather extreme power-law concentration-mass relation C(M) is used, while more realistic C(M) relations make the extragalactic component comparable or subdominant to the Galactic signal. For the decaying DM the Galactic signal always exceeds the extragalactic one. In the case of annihilating DM the PFH favored parameters can be ruled out by gamma-ray constraints only if power-law C(M) relation is assumed. For DM decaying into 2μ or 4μ the PFH favored DM parameters are not in conflict with the gamma-ray data. We find that, due to the (almost) featureless Galactic IC spectrum and the DM halo substructure, annihilating DM may give a good simultaneous fit to the isotropic diffuse gamma-ray and to the PFH e{sup ±} data without being in clear conflict with the other Fermi-LAT gamma-ray measurements.

  18. Fermi/LAT observations of dwarf galaxies highly constrain a dark matter interpretation of excess positrons seen in AMS-02, HEAT, and PAMELA

    SciTech Connect

    López, Alejandro; Savage, Christopher; Spolyar, Douglas; Adams, Douglas Q. E-mail: chris@savage.name E-mail: doug.q.adams@gmail.com

    2016-03-01

    It is shown that a Weakly Interacting Massive dark matter Particle (WIMP) interpretation for the positron excess observed in a variety of experiments, HEAT, PAMELA, and AMS-02, is highly constrained by the Fermi/LAT observations of dwarf galaxies. In particular, this paper examines the annihilation channels that best fit the current AMS-02 data (Boudaud et al., 2014), specifically focusing on channels and parameter space not previously explored by the Fermi/LAT collaboration. The Fermi satellite has surveyed the γ-ray sky, and its observations of dwarf satellites are used to place strong bounds on the annihilation of WIMPs into a variety of channels. For the single channel case, we find that dark matter annihilation into (b b-bar ,e{sup +}e{sup -}, μ{sup +}μ{sup -}, τ{sup +}τ{sup -},4-e or 4-τ ) is ruled out as an explanation of the AMS positron excess (here b quarks are a proxy for all quarks, gauge and Higgs bosons). In addition, we find that the Fermi/LAT 2σ upper limits, assuming the best-fit AMS-02 branching ratios, exclude multichannel combinations into b b-bar and leptons. The tension between the results might relax if the branching ratios are allowed to deviate from their best-fit values, though a substantial change would be required. Of all the channels we considered, the only viable channel that survives the Fermi/LAT constraint and produces a good fit to the AMS-02 data is annihilation (via a mediator) to 4-μ, or mainly to 4-μ in the case of multichannel combinations.

  19. Fermi/LAT observations of dwarf galaxies highly constrain a dark matter interpretation of excess positrons seen in AMS-02, HEAT, and PAMELA

    NASA Astrophysics Data System (ADS)

    López, Alejandro; Savage, Christopher; Spolyar, Douglas; Adams, Douglas Q.

    2016-03-01

    It is shown that a Weakly Interacting Massive dark matter Particle (WIMP) interpretation for the positron excess observed in a variety of experiments, HEAT, PAMELA, and AMS-02, is highly constrained by the Fermi/LAT observations of dwarf galaxies. In particular, this paper examines the annihilation channels that best fit the current AMS-02 data (Boudaud et al., 2014), specifically focusing on channels and parameter space not previously explored by the Fermi/LAT collaboration. The Fermi satellite has surveyed the γ-ray sky, and its observations of dwarf satellites are used to place strong bounds on the annihilation of WIMPs into a variety of channels. For the single channel case, we find that dark matter annihilation into {bbar b,e+e-, μ+μ-, τ+τ-,4-e or 4-τ } is ruled out as an explanation of the AMS positron excess (here b quarks are a proxy for all quarks, gauge and Higgs bosons). In addition, we find that the Fermi/LAT 2σ upper limits, assuming the best-fit AMS-02 branching ratios, exclude multichannel combinations into bbar b and leptons. The tension between the results might relax if the branching ratios are allowed to deviate from their best-fit values, though a substantial change would be required. Of all the channels we considered, the only viable channel that survives the Fermi/LAT constraint and produces a good fit to the AMS-02 data is annihilation (via a mediator) to 4-μ, or mainly to 4-μ in the case of multichannel combinations.

  20. Campylobacter jejuni carbon starvation protein A (CstA) is involved in peptide utilization, motility and agglutination, and has a role in stimulation of dendritic cells.

    PubMed

    Rasmussen, J J; Vegge, C S; Frøkiær, H; Howlett, R M; Krogfelt, K A; Kelly, D J; Ingmer, H

    2013-08-01

    Campylobacter jejuni is the most frequent cause of severe gastroenteritis in the developed world. The major symptom of campylobacteriosis is inflammatory diarrhoea. The molecular mechanisms of this infection are poorly understood compared to those of less frequent disease-causing pathogens. In a previous study, we identified C. jejuni proteins that antibodies in human campylobacteriosis patients reacted with. One of the immunogenic proteins identified (Cj0917) displays homology to carbon starvation protein A (CstA) from Escherichia coli, where this protein is involved in the starvation response and peptide uptake. In contrast to many bacteria, C. jejuni relies on amino acids and organic acids for energy, but in vivo it is highly likely that peptides are also utilized, although their mechanisms of uptake are unknown. In this study, Biolog phenotype microarrays have been used to show that a ΔcstA mutant has a reduced ability to utilize a number of di- and tri-peptides as nitrogen sources. This phenotype was restored through genetic complementation, suggesting CstA is a peptide uptake system in C. jejuni. Furthermore, the ΔcstA mutant also displayed reduced motility and reduced agglutination compared to WT bacteria; these phenotypes were also restored through complementation. Murine dendritic cells exposed to UV-killed bacteria showed a reduced IL-12 production, but the same IL-10 response when encountering C. jejuni ΔcstA compared to the WT strain. The greater Th1 stimulation elicited by the WT as compared to ΔcstA mutant cells indicates an altered antigenic presentation on the surface, and thus an altered recognition of the mutant. Thus, we conclude that C. jejuni CstA is important not only for peptide utilization, but also it may influence host-pathogen interactions.