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Sample records for aggregate spectral efficiency

  1. 1024 QAM, 7-core (60 Gbit/s x 7) fiber transmission over 55 km with an aggregate potential spectral efficiency of 109 bit/s/Hz.

    PubMed

    Yoshida, Masato; Beppu, Shohei; Kasai, Keisuke; Hirooka, Toshihiko; Nakazawa, Masataka

    2015-08-10

    We report the first 1024 QAM polarization-multiplexed transmission at 3 Gsymbol/s over a 55 km 7-core fiber, with a total bit rate of 420 Gbit/s (60 Gbit/s x 7 cores). The potential spectral efficiency per core reached 15.6 bit/s/Hz, which corresponds to an aggregate spectral efficiency as high as 109 bit/s/Hz in a multi-core single-mode fiber.

  2. Efficient clustering aggregation based on data fragments.

    PubMed

    Wu, Ou; Hu, Weiming; Maybank, Stephen J; Zhu, Mingliang; Li, Bing

    2012-06-01

    Clustering aggregation, known as clustering ensembles, has emerged as a powerful technique for combining different clustering results to obtain a single better clustering. Existing clustering aggregation algorithms are applied directly to data points, in what is referred to as the point-based approach. The algorithms are inefficient if the number of data points is large. We define an efficient approach for clustering aggregation based on data fragments. In this fragment-based approach, a data fragment is any subset of the data that is not split by any of the clustering results. To establish the theoretical bases of the proposed approach, we prove that clustering aggregation can be performed directly on data fragments under two widely used goodness measures for clustering aggregation taken from the literature. Three new clustering aggregation algorithms are described. The experimental results obtained using several public data sets show that the new algorithms have lower computational complexity than three well-known existing point-based clustering aggregation algorithms (Agglomerative, Furthest, and LocalSearch); nevertheless, the new algorithms do not sacrifice the accuracy. PMID:22334025

  3. WDM/SDM transmission of 10 x 128-Gb/s PDM-QPSK over 2688-km 7-core fiber with a per-fiber net aggregate spectral-efficiency distance product of 40,320 km·b/s/Hz.

    PubMed

    Chandrasekhar, S; Gnauck, A H; Liu, Xiang; Winzer, P J; Pan, Y; Burrows, E C; Taunay, T F; Zhu, B; Fishteyn, M; Yan, M F; Fini, J M; Monberg, E M; Dimarcello, F V

    2012-01-16

    We demonstrate 2688-km multi-span transmission using wavelength-division multiplexing (WDM) of ten 50-GHz spaced 128-Gb/s PDM-QPSK signals, space-division multiplexed (SDM) in a low-crosstalk 76.8-km seven-core fiber, achieving a record net aggregate per-fiber-spectral-efficiency-distance product of 40,320 km·b/s/Hz. The demonstration was enabled by a novel core-to-core signal rotation scheme implemented in a 7-fold, synchronized recirculating loop apparatus.

  4. Information-efficient spectral imaging sensor

    DOEpatents

    Sweatt, William C.; Gentry, Stephen M.; Boye, Clinton A.; Grotbeck, Carter L.; Stallard, Brian R.; Descour, Michael R.

    2003-01-01

    A programmable optical filter for use in multispectral and hyperspectral imaging. The filter splits the light collected by an optical telescope into two channels for each of the pixels in a row in a scanned image, one channel to handle the positive elements of a spectral basis filter and one for the negative elements of the spectral basis filter. Each channel for each pixel disperses its light into n spectral bins, with the light in each bin being attenuated in accordance with the value of the associated positive or negative element of the spectral basis vector. The spectral basis vector is constructed so that its positive elements emphasize the presence of a target and its negative elements emphasize the presence of the constituents of the background of the imaged scene. The attenuated light in the channels is re-imaged onto separate detectors for each pixel and then the signals from the detectors are combined to give an indication of the presence or not of the target in each pixel of the scanned scene. This system provides for a very efficient optical determination of the presence of the target, as opposed to the very data intensive data manipulations that are required in conventional hyperspectral imaging systems.

  5. Spectrally efficient polymer optical fiber transmission

    NASA Astrophysics Data System (ADS)

    Randel, Sebastian; Bunge, Christian-Alexander

    2011-01-01

    The step-index polymer optical fiber (SI-POF) is an attractive transmission medium for high speed communication links in automotive infotainment networks, in industrial automation, and in home networks. Growing demands for quality of service, e.g., for IPTV distribution in homes and for Ethernet based industrial control networks will necessitate Gigabit speeds in the near future. We present an overview on recent advances in the design of spectrally efficient and robust Gigabit-over-SI-POF transmission systems.

  6. Control of binder viscosity and hygroscopicity on particle aggregation efficiency

    NASA Astrophysics Data System (ADS)

    Mueller, Sebastian B.; Kueppers, Ulrich; Ayris, Paul M.; Jacob, Michael; Delmelle, Pierre; Dingwell, Donald B.

    2016-04-01

    In the course of explosive volcanic eruptions, large amounts of ash are released into the atmosphere and may subsequently pose a threat to infrastructure, such as aviation industry. Ash plume forecasting is therefore a crucial tool for volcanic hazard mitigation but may be significantly affected by aggregation, altering the aerodynamic properties of particles. Models struggle with the implementation of aggregation since external conditions promoting aggregation have not been completely understood; in a previous study we have shown the rapid generation of ash aggregates through liquid bonding via the use of fluidization bed technology and further defined humidity and temperature ranges necessary to trigger aggregation. Salt (NaCl) was required for the recovery of stable aggregates, acting as a cementation agent and granting aggregate cohesion. A numerical model was used to explain the physics behind particle aggregation mechanisms and further predicted a dependency of aggregation efficiency on liquid binder viscosity. In this study we proof the effect of viscosity on particle aggregation. HCl and H2SO4 solutions were diluted to various concentrations resulting in viscosities between 1 and 2 mPas. Phonolitic and rhyolitic ash samples as well as soda-lime glass beads (serving as analogue material) were fluidized in the ProCell Lab® of Glatt Ingenieurtechnik GmbH and treated with the acids via a bottom-spray technique. Chemically driven interaction between acid liquids and surfaces of the three used materials led to crystal precipitation. Salt crystals (e.g. NaCl) have been confirmed through scanning electron microscopy (SEM) and leachate analysis. Both volcanic ash samples as well as the glass beads showed a clear dependency of aggregation efficiency on viscosity of the sprayed HCl solution. Spraying H2SO4 provoked a collapse of the fluidized bed and no aggregation has been observed. This is accounted by the high hygroscopicity of H2SO4. Dissolving CaCl2 (known to be

  7. An improved collision efficiency model for particle aggregation

    NASA Astrophysics Data System (ADS)

    Olsen, Aaron; Franks, George; Biggs, Simon; Jameson, Graeme J.

    2006-11-01

    A generalized geometric model is presented which describes the collision efficiency factor of aggregation (the probability of a binary particle or aggregate collision resulting in adhesion) for systems comprised of two oppositely charged species. Application of the general model to specific systems requires calculation of the area of each species available for collision with a second species. This is in contrast to previous models developed for polymer-particle flocculation that are based on the fractional surface coverage of adsorbed polymer. The difference between these approaches is suggested as an explanation for previously observed discrepancies between theory and observation. In the current work the specific case of oppositely charged nondeformable spherical particles (heteroaggregation) is quantitatively addressed. The optimum concentration of oppositely charged particles for rapid aggregation (maximum collision efficiency) as a function of relative particle size is calculated and an excellent correlation is found with data taken from literature.

  8. An improved collision efficiency model for particle aggregation.

    PubMed

    Olsen, Aaron; Franks, George; Biggs, Simon; Jameson, Graeme J

    2006-11-14

    A generalized geometric model is presented which describes the collision efficiency factor of aggregation (the probability of a binary particle or aggregate collision resulting in adhesion) for systems comprised of two oppositely charged species. Application of the general model to specific systems requires calculation of the area of each species available for collision with a second species. This is in contrast to previous models developed for polymer-particle flocculation that are based on the fractional surface coverage of adsorbed polymer. The difference between these approaches is suggested as an explanation for previously observed discrepancies between theory and observation. In the current work the specific case of oppositely charged nondeformable spherical particles (heteroaggregation) is quantitatively addressed. The optimum concentration of oppositely charged particles for rapid aggregation (maximum collision efficiency) as a function of relative particle size is calculated and an excellent correlation is found with data taken from literature. PMID:17115794

  9. The infrared spectral transmittance of Aspergillus niger spore aggregated particle swarm

    NASA Astrophysics Data System (ADS)

    Zhao, Xinying; Hu, Yihua; Gu, Youlin; Li, Le

    2015-10-01

    Microorganism aggregated particle swarm, which is quite an important composition of complex media environment, can be developed as a new kind of infrared functional materials. Current researches mainly focus on the optical properties of single microorganism particle. As for the swarm, especially the microorganism aggregated particle swarm, a more accurate simulation model should be proposed to calculate its extinction effect. At the same time, certain parameters deserve to be discussed, which helps to better develop the microorganism aggregated particle swarm as a new kind of infrared functional materials. In this paper, take Aspergillus Niger spore as an example. On the one hand, a new calculation model is established. Firstly, the cluster-cluster aggregation (CCA) model is used to simulate the structure of Aspergillus Niger spore aggregated particle. Secondly, the single scattering extinction parameters for Aspergillus Niger spore aggregated particle are calculated by using the discrete dipole approximation (DDA) method. Thirdly, the transmittance of Aspergillus Niger spore aggregated particle swarm is simulated by using Monte Carlo method. On the other hand, based on the model proposed above, what influences can wavelength causes has been studied, including the spectral distribution of scattering intensity of Aspergillus Niger spore aggregated particle and the infrared spectral transmittance of the aggregated particle swarm within the range of 8~14μm incident infrared wavelengths. Numerical results indicate that the scattering intensity of Aspergillus Niger spore aggregated particle reduces with the increase of incident wavelengths at each scattering angle. Scattering energy mainly concentrates on the scattering angle between 0~40°, forward scattering has an obvious effect. In addition, the infrared transmittance of Aspergillus Niger spore aggregated particle swarm goes up with the increase of incident wavelengths. However, some turning points of the trend

  10. Temperature dependence of aggregated structure of β-carotene by absorption spectral experiment and simulation.

    PubMed

    Lu, Liping; Wu, Jie; Wei, Liangshu; Wu, Fang

    2016-12-01

    β-carotene can self-assemble to form J- or H-type aggregate in hydrophilic environments, which is crucial for the proper functioning of biological system. Although several ways controlling the formation of the two types of aggregate in hydrated ethanol have been investigated in recent years, our study provided another way to control whether J- or H- β-carotene was formed and presented a method to investigate the aggregated structure. For this purpose, the aggregates of β-carotene formed at different temperatures were studied by UV-Vis spectra and a computational method based on Frenkel exciton was applied to simulate the absorption spectra to obtain the aggregated structure of the β-carotene. The analysis showed that β-carotene formed weakly coupled H-aggregate at 15°C in 1:1 ethanol-water solvent, and with the increase of temperature it tended to form J-type of aggregate. The absorption spectral simulation based on one-dimensional Frenkel exciton model revealed that good fit with the experiment was obtained with distance between neighbor molecules r=0.82nm, disorder of the system D=1500cm(-1) for H-type and r=1.04nm, D=1800cm(-1) for J-type. PMID:27348046

  11. Temperature dependence of aggregated structure of β-carotene by absorption spectral experiment and simulation

    NASA Astrophysics Data System (ADS)

    Lu, Liping; Wu, Jie; Wei, Liangshu; Wu, Fang

    2016-12-01

    β-carotene can self-assemble to form J- or H-type aggregate in hydrophilic environments, which is crucial for the proper functioning of biological system. Although several ways controlling the formation of the two types of aggregate in hydrated ethanol have been investigated in recent years, our study provided another way to control whether J- or H- β-carotene was formed and presented a method to investigate the aggregated structure. For this purpose, the aggregates of β-carotene formed at different temperatures were studied by UV-Vis spectra and a computational method based on Frenkel exciton was applied to simulate the absorption spectra to obtain the aggregated structure of the β-carotene. The analysis showed that β-carotene formed weakly coupled H-aggregate at 15 °C in 1:1 ethanol-water solvent, and with the increase of temperature it tended to form J-type of aggregate. The absorption spectral simulation based on one-dimensional Frenkel exciton model revealed that good fit with the experiment was obtained with distance between neighbor molecules r = 0.82 nm, disorder of the system D = 1500 cm- 1 for H-type and r = 1.04 nm, D = 1800 cm- 1 for J-type.

  12. The aggregation efficiency of very fine volcanic ash

    NASA Astrophysics Data System (ADS)

    Del Bello, E.; Taddeucci, J.; Scarlato, P.

    2013-12-01

    Explosive volcanic eruptions can discharge large amounts of very small sized pyroclasts (under 0.090 mm) into the atmosphere that may cause problems to people, infrastructures and environment. The transport and deposition of fine ash are ruled by aggregation that causes premature settling of fine ash and, as consequence, significantly reduces the concentration of airborne material over long distances. Parameterizing the aggregation potential of fine ash is then needed to provide accurate modelling of ash transport and deposition from volcanic plumes. Here we present the first results of laboratory experiments investigating the aggregation efficiency of very fine volcanic particles. Previous laboratory experiments have shown that collision kinetic and relative humidity provide the strongest effect on aggregation behaviour but were only limited to particles with size > 0.125 mm. In our work, we focus on natural volcanic ash at ambient humidity with particles size < 0.090 mm, by taking into account the effect of grain size distribution on aggregation potential. Two types of ash were used in our experiments: fresh ash, collected during fall-out from a recent plume-forming eruption at Sakurajima (Japan -July 2013) and old ash, collected from fall-out tephra deposits at Campi Flegrei (Italy, ca. 10 ka), to account for the different chemical composition and morphoscopic effects of altered ash on aggregation efficiency. Total samples were hand sieved to obtain three classes with unimodal grain size distributions (<0.090 mm, <0.063 mm, <0.032 mm). Bimodal grain size distributions were also obtained by mixing the three classes in different proportions. During each experiments, particles were sieved from the top of a transparent tank where a fan, placed at the bottom, allows turbulent dispersion of particles. Collision and sticking of particles on a vertical glass slide were filmed with a high speed cameras at 6000 fps. Our lenses arrangement provide high image resolution

  13. Electrooptic Kerr effect of porphyrin H-aggregates in polymer films: Polymer specific spectral blue shift

    NASA Astrophysics Data System (ADS)

    Suzuki, Masaya; Nakata, Kazuaki; Kuroda, Reiko; Kobayashi, Takayoshi; Tokunaga, Eiji

    2016-05-01

    J- and H-aggregates of porphyrin molecules (TPPS4) in spin-coated polymer films have been studied by electroabsorption and circular dichroism (CD) spectroscopy. A spectral blue shift of the H-band due to the electrooptic Kerr effect was observed for the first time. This occurs only for a polyvinylpyrrolidone (PVP) film, with negligibly small spectral shift observed in polyvinyl alcohol (PVA), polyvinyl sulfate (PVS), and polyacrylic acid (PAA) films, in contrast to the red shift of the J-band which is commonly observed for any host polymers. Accordingly, the CD activity in both of J- and H-bands is more enhanced in PVP films than in PVA films. The mechanism of the blue and red shifts of the respective H- and J-bands is discussed by invoking a helical structure in micro-aggregates, which is compatible with the CD spectra, based on the molecular rearrangement model. It is proved that blue- and red-shifts occur evenly to cancel each other in the H-band if a simple helical structure is assumed, in good agreement with no spectral shifts in the H-band in PVA, PVS, and PAA films.

  14. The development of a robust, efficient solver for spectral and spectral-element time discretizations

    NASA Astrophysics Data System (ADS)

    Mundis, Nathan L.

    This work examines alternative time discretizations for the Euler equations and methods for the robust and efficient solution of these discretizations. Specifically, the time-spectral method (TS), quasi-periodic time-spectral method (BDFTS), and spectral-element method in time (SEMT) are derived and examined in detail. For the two time-spectral based methods, focus is given to expanding these methods for more complicated problems than have been typically solved by other authors, including problems with spectral content in a large number of harmonics, gust response problems, and aeroelastic problems. To solve these more complicated problems, it was necessary to implement the flexible variant of the Generalized Minimal Residual method (FGMRES), utilizing the full second-order accurate spatial Jacobian, complete temporal coupling of the chosen time discretization, and fully-implicit coupling of the aeroelastic equations in the cases where they are needed. The FGMRES solver developed utilizes a block-colored Gauss-Seidel (BCGS) preconditioner augmented by a defect-correction process to increase its effectiveness. Exploration of more efficient preconditioners for the FGMRES solver is an anticipated topic for future work in this field. It was a logical extension to apply this already developed FGMRES solver to the spectral-element method in time, which has some advantages over the spectral methods already discussed. Unlike purely-spectral methods, SEMT allows for bothh- and p-refinement. This property could allow for element clustering around areas of sharp gradients and discontinuities, which in turn could make SEMT more efficient than TS for periodic problems that contain these sharp gradients and would require many time instances to produce a precise solution using the TS method. As such, a preliminary investigation of the SEMT method applied to the Euler equations is conducted and some areas for needed improvement in future work are identified. In this work, it is

  15. Spectral diffraction efficiency characterization of broadband diffractive optical elements.

    SciTech Connect

    Choi, Junoh; Cruz-Cabrera, Alvaro Augusto; Tanbakuchi, Anthony

    2013-03-01

    Diffractive optical elements, with their thin profile and unique dispersion properties, have been studied and utilized in a number of optical systems, often yielding smaller and lighter systems. Despite the interest in and study of diffractive elements, the application has been limited to narrow spectral bands. This is due to the etch depths, which are optimized for optical path differences of only a single wavelength, consequently leading to rapid decline in efficiency as the working wavelength shifts away from the design wavelength. Various broadband diffractive design methodologies have recently been developed that improve spectral diffraction efficiency and expand the working bandwidth of diffractive elements. We have developed diffraction efficiency models and utilized the models to design, fabricate, and test two such extended bandwidth diffractive designs.

  16. Embryo Aggregation in Pig Improves Cloning Efficiency and Embryo Quality.

    PubMed

    Buemo, Carla Paola; Gambini, Andrés; Moro, Lucia Natalia; Hiriart, María Inés; Fernández-Martín, Rafael; Collas, Philippe; Salamone, Daniel Felipe

    2016-01-01

    In this study, we analyzed the effects of the cloned embryo aggregation on in vitro embryo development and embryo quality by measuring blastocyst diameter and cell number, DNA fragmentation levels and the expression of genes associated with pluripotency, apoptosis, trophoblast and DNA methylation in the porcine. Zona-free reconstructed cloned embryos were cultured in the well of the well system, placing one (1x non aggregated group) or three (3x group) embryos per microwell. Our results showed that aggregation of three embryos increased blastocyst formation rate and blastocyst diameter of cloned pig embryos. DNA fragmentation levels in 3x aggregated cloned blastocysts were significantly decreased compared to 1x blastocysts. Levels of Oct4, Klf4, Igf2, Bax and Dnmt 1 transcripts were significantly higher in aggregated embryos, whereas Nanog levels were not affected. Transcripts of Cdx2 and Bcl-xl were essentially non-detectable. Our study suggests that embryo aggregation in the porcine may be beneficial for cloned embryo development and embryo quality, through a reduction in apoptotic levels and an improvement in cell reprogramming.

  17. Embryo Aggregation in Pig Improves Cloning Efficiency and Embryo Quality

    PubMed Central

    Buemo, Carla Paola; Gambini, Andrés; Moro, Lucia Natalia; Hiriart, María Inés; Fernández-Martín, Rafael; Collas, Philippe; Salamone, Daniel Felipe

    2016-01-01

    In this study, we analyzed the effects of the cloned embryo aggregation on in vitro embryo development and embryo quality by measuring blastocyst diameter and cell number, DNA fragmentation levels and the expression of genes associated with pluripotency, apoptosis, trophoblast and DNA methylation in the porcine. Zona-free reconstructed cloned embryos were cultured in the well of the well system, placing one (1x non aggregated group) or three (3x group) embryos per microwell. Our results showed that aggregation of three embryos increased blastocyst formation rate and blastocyst diameter of cloned pig embryos. DNA fragmentation levels in 3x aggregated cloned blastocysts were significantly decreased compared to 1x blastocysts. Levels of Oct4, Klf4, Igf2, Bax and Dnmt 1 transcripts were significantly higher in aggregated embryos, whereas Nanog levels were not affected. Transcripts of Cdx2 and Bcl-xl were essentially non-detectable. Our study suggests that embryo aggregation in the porcine may be beneficial for cloned embryo development and embryo quality, through a reduction in apoptotic levels and an improvement in cell reprogramming. PMID:26894831

  18. Embryo Aggregation in Pig Improves Cloning Efficiency and Embryo Quality.

    PubMed

    Buemo, Carla Paola; Gambini, Andrés; Moro, Lucia Natalia; Hiriart, María Inés; Fernández-Martín, Rafael; Collas, Philippe; Salamone, Daniel Felipe

    2016-01-01

    In this study, we analyzed the effects of the cloned embryo aggregation on in vitro embryo development and embryo quality by measuring blastocyst diameter and cell number, DNA fragmentation levels and the expression of genes associated with pluripotency, apoptosis, trophoblast and DNA methylation in the porcine. Zona-free reconstructed cloned embryos were cultured in the well of the well system, placing one (1x non aggregated group) or three (3x group) embryos per microwell. Our results showed that aggregation of three embryos increased blastocyst formation rate and blastocyst diameter of cloned pig embryos. DNA fragmentation levels in 3x aggregated cloned blastocysts were significantly decreased compared to 1x blastocysts. Levels of Oct4, Klf4, Igf2, Bax and Dnmt 1 transcripts were significantly higher in aggregated embryos, whereas Nanog levels were not affected. Transcripts of Cdx2 and Bcl-xl were essentially non-detectable. Our study suggests that embryo aggregation in the porcine may be beneficial for cloned embryo development and embryo quality, through a reduction in apoptotic levels and an improvement in cell reprogramming. PMID:26894831

  19. Soliton communication lines based on spectrally efficient modulation formats

    SciTech Connect

    Yushko, O V; Redyuk, A A

    2014-06-30

    We report the results of mathematical modelling of optical-signal propagation in soliton fibre-optic communication lines (FOCLs) based on spectrally efficient signal modulation formats. We have studied the influence of spontaneous emission noise, nonlinear distortions and FOCL length on the data transmission quality. We have compared the characteristics of a received optical signal for soliton and conventional dispersion compensating FOCLs. It is shown that in the presence of strong nonlinearity long-haul soliton FOCLs provide a higher data transmission performance, as well as allow higher order modulation formats to be used as compared to conventional communication lines. In the context of a coherent data transmission, soliton FOCLs allow the use of phase modulation with many levels, thereby increasing the spectral efficiency of the communication line. (optical communication lines)

  20. Modulation techniques for power and spectrally efficient SATCOM systems

    NASA Technical Reports Server (NTRS)

    Feher, Kamilo

    1992-01-01

    Research on modulation/demodulation (modem) techniques which leads to improved power and spectrally efficient digital satellite communications systems is proposed. A new family of digital modems, which enable satellite earth station and satellite transponder operation with fully saturated high power amplifiers (HPA) in an adjacent channel environment, having an optimized P(e) = f(E(sub b)/N(sub o)) performance will be introduced and analyzed.

  1. Information-Efficient Spectral Imaging Sensor With Tdi

    DOEpatents

    Rienstra, Jeffrey L.; Gentry, Stephen M.; Sweatt, William C.

    2004-01-13

    A programmable optical filter for use in multispectral and hyperspectral imaging employing variable gain time delay and integrate arrays. A telescope focuses an image of a scene onto at least one TDI array that is covered by a multispectral filter that passes separate bandwidths of light onto the rows in the TDI array. The variable gain feature of the TDI array allows individual rows of pixels to be attenuated individually. The attenuations are functions of the magnitudes of the positive and negative components of a spectral basis vector. The spectral basis vector is constructed so that its positive elements emphasize the presence of a target and its negative elements emphasize the presence of the constituents of the background of the imaged scene. This system provides for a very efficient determination of the presence of the target, as opposed to the very data intensive data manipulations that are required in conventional hyperspectral imaging systems.

  2. Spectral Graph Analyses of Water Hydrogen-Bonding Network and Osmolyte Aggregate Structures in Osmolyte-Water Solutions.

    PubMed

    Lee, Hochan; Choi, Jun-Ho; Verma, Pramod Kumar; Cho, Minhaeng

    2015-11-12

    Recently, it was shown that the spectral graph theory is exceptionally useful for understanding not only morphological structural differences in ion aggregates but also similarities between an ion network and a water H-bonding network in highly concentrated salt solutions. Here, we present spectral graph analysis results on osmolyte aggregates and water H-bonding network structures in aqueous renal osmolyte solutions. The quantitative analyses of the adjacency matrices that are graph-theoretical representations of aggregates of osmolyte molecules and water H-bond structures provide the ensemble average eigenvalue spectra and degree distribution. We show that urea molecules form quite different morphological structures compared to other protecting renal osmolyte molecules in water, particularly sorbitol and trimethylglycine, which are well-known protecting osmolytes, and at high concentrations exhibit a strong propensity to form morphological structures that are graph-theoretically similar to that of the water H-bond network. Conversely, urea molecules, even at similarly high concentrations, form separated clusters instead of extended osmolyte-osmolyte networks. This difference in morphological structure of osmolyte-osmolyte aggregates between protecting and destabilizing osmolytes is considered to be an important observation that led us to propose a hypothesis on the osmolyte aggregate growth mechanism via either osmolyte network formation or segregated osmolyte cluster formation. We anticipate that the present spectral graph analyses of osmolyte aggregate structures and their interplay with the water H-bond network structure in highly concentrated renal osmolyte solutions could provide important information on the osmolyte effects of not only water structures but also protein stability in biologically relevant osmolyte solutions.

  3. Aggregate eco-efficiency indices for New Zealand--a principal components analysis.

    PubMed

    Jollands, Nigel; Lermit, Jonathan; Patterson, Murray

    2004-12-01

    Eco-efficiency has emerged as a management response to waste issues associated with current production processes. Despite the popularity of the term in both business and government circles, limited attention has been paid to measuring and reporting eco-efficiency to government policy makers. Aggregate measures of eco-efficiency are needed, to complement existing measures and to help highlight important patterns in eco-efficiency data. This paper aims to develop aggregate measures of eco-efficiency for use by policy makers. Specifically, this paper provides a unique analysis by applying principal components analysis (PCA) to eco-efficiency indicators in New Zealand. The study reveals that New Zealand's overall eco-efficiency improved for two out of the five aggregate measures over the period 1994/1995-1997/1998. The worsening of the other aggregate measures reflects, among other things, the relatively poor performance of the primary production and related processing sectors. These results show PCA is an effective approach for aggregating eco-efficiency indicators and assisting decision makers by reducing redundancy in an eco-efficiency indicators matrix.

  4. Efficient decentralized data aggregation in wireless smart sensor networks

    NASA Astrophysics Data System (ADS)

    Sim, Sung-Han; Carbonell-Marquez, Juan Francisco; Spencer, Billie F., Jr.

    2010-04-01

    Smart sensors have been recognized as a promising technology with the potential to overcome many of the inherent difficulties and limitations associated with traditional wired structural health monitoring (SHM) systems. The unique features offered by smart sensors, including wireless communication, on-board computation, and cost effectiveness, enable deployment of the dense array of sensors that are needed for monitoring of large-scale civil infrastructure. Despite the many advances in smart sensor technologies, power consumption is still considered as one of the most important challenges that should be addressed for the smart sensors to be more widely adopted in SHM applications. Data communication, the most significant source of the power consumption, can be reduced by appropriately selecting data processing schemes and the related network topology. This paper presents a new decentralized data aggregation approach for system identification based on the Random Decrement Technique (RDT). Following a brief overview of the RDT, which is an output-only system identification approach, a decentralized hierarchical approach is described and shown to be suitable for implementation in the intrinsically distributed computing environment found in wireless smart sensor networks (WSSNs). RDT-based decentralized data aggregation is then implemented on the Imote2 smart sensor platform based on the Illinois Structural Health Monitoring Project (ISHMP) Services Toolsuite. Finally, the efficacy of the RDT method is demonstrated experimentally in terms of the required data communication and the accuracy of identified dynamic properties.

  5. A Novel Energy-Efficient MAC Aware Data Aggregation Routing in Wireless Sensor Networks.

    PubMed

    Lin, Frank Yeong-Sung; Yen, Hong-Hsu; Lin, Shu-Ping

    2009-01-01

    Embedding data-aggregation capabilities into sensor nodes of wireless networks could save energy by reducing redundant data flow transmissions. Existing research describes the construction of data aggregation trees to maximize data aggregation times in order to reduce data transmission of redundant data. However, aggregation of more nodes on the same node will incur significant collisions. These MAC (Media Access Control) layer collisions introduce additional data retransmissions that could jeopardize the advantages of data aggregation. This paper is the first to consider the energy consumption tradeoffs between data aggregation and retransmissions in a wireless sensor network. By using the existing CSMA/CA (Carrier Sense Multiple Access with Collision Avoidance) MAC protocol, the retransmission energy consumption function is well formulated. This paper proposes a novel non-linear mathematical formulation, whose function is to minimize the total energy consumption of data transmission subject to data aggregation trees and data retransmissions. This solution approach is based on Lagrangean relaxation, in conjunction with optimization-based heuristics. From the computational experiments, it is shown that the proposed algorithms could construct MAC aware data aggregation trees that are up to 59% more energy efficient than existing data aggregation algorithms. PMID:22573969

  6. Pancam and Microscopic Imager observations of dust on the Spirit Rover: Cleaning events, spectral properties, and aggregates

    USGS Publications Warehouse

    Vaughan, Alicia F.; Johnson, Jeffrey R.; Herkenhoff, Kenneth E.; Sullivan, Robert; Landis, Geoffrey A.; Goetz, Walter; Madsen, Morten B.

    2010-01-01

    This work describes dust deposits on the Spirit Rover over 2000 sols through examination of Pancam and Microscopic Imager observations of specific locations on the rover body, including portions of the solar array, Pancam and Mini-TES calibration targets, and the magnets. This data set reveals the three "cleaning events" experienced by Spirit to date, the spectral properties of dust, and the tendency of dust particles to form aggregates 100 um and larger.

  7. Deposition efficiency of fractal-like aggregates in fibrous filters calculated using Brownian dynamics method.

    PubMed

    Bałazy, Anna; Podgórski, Albert

    2007-07-15

    Nonspherical particles, such as fractal-like aggregates emitted by diesel engines, are commonly met in the ambient air. Some of them are believed to be carcinogenic to humans, thus their efficient removal is of crucial practical importance. A fibrous filter is the device commonly used for aerosol purification but the literature lacks experimental data concerning aggregates filtration. Effect of aggregates' parameters (fractal dimension, primary particle radius) as well as fiber diameter and air velocity on the filtration efficiency is investigated theoretically using the modified Brownian dynamics method. Three different expressions for the friction coefficient evaluation for the aggregates were examined. The results obtained indicate that structure of an aggregate, filter structure and process conditions strongly influence the aggregates deposition efficiency, which significantly differs from the values determined for mass-equivalent spherical particles. The results determined using the Brownian dynamics approach were compared with the values calculated using classical single fiber theory and noticeable discrepancy was observed for the most penetrating particles, while both approaches agree for the limiting cases of small or large particles. Peclet number based on the mobility radius and the interception parameter based on the outer radius are the proper criteria to describe diffusional and deterministic deposition of aggregates.

  8. Efficient geometric rectification techniques for spectral analysis algorithm

    NASA Technical Reports Server (NTRS)

    Chang, C. Y.; Pang, S. S.; Curlander, J. C.

    1992-01-01

    The spectral analysis algorithm is a viable technique for processing synthetic aperture radar (SAR) data in near real time throughput rates by trading the image resolution. One major challenge of the spectral analysis algorithm is that the output image, often referred to as the range-Doppler image, is represented in the iso-range and iso-Doppler lines, a curved grid format. This phenomenon is known to be the fanshape effect. Therefore, resampling is required to convert the range-Doppler image into a rectangular grid format before the individual images can be overlaid together to form seamless multi-look strip imagery. An efficient algorithm for geometric rectification of the range-Doppler image is presented. The proposed algorithm, realized in two one-dimensional resampling steps, takes into consideration the fanshape phenomenon of the range-Doppler image as well as the high squint angle and updates of the cross-track and along-track Doppler parameters. No ground reference points are required.

  9. High-efficiency spectral purity filter for EUV lithography

    DOEpatents

    Chapman, Henry N.

    2006-05-23

    An asymmetric-cut multilayer diffracts EUV light. A multilayer cut at an angle has the same properties as a blazed grating, and has been demonstrated to have near-perfect performance. Instead of having to nano-fabricate a grating structure with imperfections no greater than several tens of nanometers, a thick multilayer is grown on a substrate and then cut at an inclined angle using coarse and inexpensive methods. Effective grating periods can be produced this way that are 10 to 100 times smaller than those produced today, and the diffraction efficiency of these asymmetric multilayers is higher than conventional gratings. Besides their ease of manufacture, the use of an asymmetric multilayer as a spectral purity filter does not require that the design of an EUV optical system be modified in any way, unlike the proposed use of blazed gratings for such systems.

  10. Pulse Shaped 8-PSK Bandwidth Efficiency and Spectral Spike Elimination

    NASA Technical Reports Server (NTRS)

    Tao, Jian-Ping

    1998-01-01

    The most bandwidth-efficient communication methods are imperative to cope with the congested frequency bands. Pulse shaping methods have excellent effects on narrowing bandwidth and increasing band utilization. The position of the baseband filters for the pulse shaping is crucial. Post-modulation pulse shaping (a low pass filter is located after the modulator) can change signals from constant envelope to non-constant envelope, and non-constant envelope signals through non-linear device (a SSPA or TWT) can further spread the power spectra. Pre-modulation pulse shaping (a filter is located before the modulator) will have constant envelope. These two pulse shaping methods have different effects on narrowing the bandwidth and producing bit errors. This report studied the effect of various pre-modulation pulse shaping filters with respect to bandwidth, spectral spikes and bit error rate. A pre-modulation pulse shaped 8-ary Phase Shift Keying (8PSK) modulation was used throughout the simulations. In addition to traditional pulse shaping filters, such as Bessel, Butterworth and Square Root Raised Cosine (SRRC), other kinds of filters or pulse waveforms were also studied in the pre-modulation pulse shaping method. Simulations were conducted by using the Signal Processing Worksystem (SPW) software package on HP workstations which simulated the power spectral density of pulse shaped 8-PSK signals, end to end system performance and bit error rates (BERS) as a function of Eb/No using pulse shaping in an AWGN channel. These results are compared with the post-modulation pulse shaped 8-PSK results. The simulations indicate traditional pulse shaping filters used in pre-modulation pulse shaping may produce narrower bandwidth, but with worse BER than those in post-modulation pulse shaping. Theory and simulations show pre- modulation pulse shaping could also produce discrete line power spectra (spikes) at regular frequency intervals. These spikes may cause interference with adjacent

  11. Aggregating embryonic but not somatic nuclear transfer embryos increases cloning efficiency in cattle.

    PubMed

    Misica-Turner, Pavla M; Oback, Fleur C; Eichenlaub, Michael; Wells, David N; Oback, Björn

    2007-02-01

    Our objectives were to compare the cellular and molecular effects of aggregating bovine embryonic vs. somatic cell nuclear transfer (ECNT vs. SCNT) embryos and to determine whether aggregation can improve cattle cloning efficiency. We reconstructed cloned embryos from: 1) morula-derived blastomeres, 2) six adult male ear skin fibroblast lines, 3) one fetal female lung fibroblast line (BFF), and 4) two transgenic clonal strains derived from BFF. Embryos were cultured either singularly (1X) or as aggregates of three (3X). In vitro-fertilized (IVF) 1X and 3X embryos served as controls. After aggregation, the in vitro development of ECNT but not that of SCNT or IVF embryos was strongly compromised. The inner cell mass (ICM), total cell (TC) numbers, and ICM:TC ratios significantly increased for all the aggregates. The relative concentration of the key embryonic transcript POU5F1 (or OCT4) did not correlate with these increases, remaining unchanged in the ECNT and IVF aggregates and decreasing significantly in the SCNT aggregates. Overall, the IVF and 3X ECNT but not the 1X ECNT embryos had significantly higher relative POU5F1 levels than the SCNT embryos. High POU5F1 levels correlated with high in vivo survival, while no such correlation was noted for the ICM:TC ratios. Development to weaning was more than doubled in the ECNT aggregates (10/51 or 20% vs. 7/85 or 8% for 3X vs. 1X, respectively; P < 0.05). In contrast, the SCNT and IVF controls showed no improvement in survival. These data reveal striking biological differences between embryonic and somatic clones in response to aggregation.

  12. On the Optimization of a Probabilistic Data Aggregation Framework for Energy Efficiency in Wireless Sensor Networks.

    PubMed

    Kafetzoglou, Stella; Aristomenopoulos, Giorgos; Papavassiliou, Symeon

    2015-01-01

    Among the key aspects of the Internet of Things (IoT) is the integration of heterogeneous sensors in a distributed system that performs actions on the physical world based on environmental information gathered by sensors and application-related constraints and requirements. Numerous applications of Wireless Sensor Networks (WSNs) have appeared in various fields, from environmental monitoring, to tactical fields, and healthcare at home, promising to change our quality of life and facilitating the vision of sensor network enabled smart cities. Given the enormous requirements that emerge in such a setting-both in terms of data and energy-data aggregation appears as a key element in reducing the amount of traffic in wireless sensor networks and achieving energy conservation. Probabilistic frameworks have been introduced as operational efficient and performance effective solutions for data aggregation in distributed sensor networks. In this work, we introduce an overall optimization approach that improves and complements such frameworks towards identifying the optimal probability for a node to aggregate packets as well as the optimal aggregation period that a node should wait for performing aggregation, so as to minimize the overall energy consumption, while satisfying certain imposed delay constraints. Primal dual decomposition is employed to solve the corresponding optimization problem while simulation results demonstrate the operational efficiency of the proposed approach under different traffic and topology scenarios. PMID:26270664

  13. On the Optimization of a Probabilistic Data Aggregation Framework for Energy Efficiency in Wireless Sensor Networks

    PubMed Central

    Kafetzoglou, Stella; Aristomenopoulos, Giorgos; Papavassiliou, Symeon

    2015-01-01

    Among the key aspects of the Internet of Things (IoT) is the integration of heterogeneous sensors in a distributed system that performs actions on the physical world based on environmental information gathered by sensors and application-related constraints and requirements. Numerous applications of Wireless Sensor Networks (WSNs) have appeared in various fields, from environmental monitoring, to tactical fields, and healthcare at home, promising to change our quality of life and facilitating the vision of sensor network enabled smart cities. Given the enormous requirements that emerge in such a setting—both in terms of data and energy—data aggregation appears as a key element in reducing the amount of traffic in wireless sensor networks and achieving energy conservation. Probabilistic frameworks have been introduced as operational efficient and performance effective solutions for data aggregation in distributed sensor networks. In this work, we introduce an overall optimization approach that improves and complements such frameworks towards identifying the optimal probability for a node to aggregate packets as well as the optimal aggregation period that a node should wait for performing aggregation, so as to minimize the overall energy consumption, while satisfying certain imposed delay constraints. Primal dual decomposition is employed to solve the corresponding optimization problem while simulation results demonstrate the operational efficiency of the proposed approach under different traffic and topology scenarios. PMID:26270664

  14. On the Optimization of a Probabilistic Data Aggregation Framework for Energy Efficiency in Wireless Sensor Networks.

    PubMed

    Kafetzoglou, Stella; Aristomenopoulos, Giorgos; Papavassiliou, Symeon

    2015-08-11

    Among the key aspects of the Internet of Things (IoT) is the integration of heterogeneous sensors in a distributed system that performs actions on the physical world based on environmental information gathered by sensors and application-related constraints and requirements. Numerous applications of Wireless Sensor Networks (WSNs) have appeared in various fields, from environmental monitoring, to tactical fields, and healthcare at home, promising to change our quality of life and facilitating the vision of sensor network enabled smart cities. Given the enormous requirements that emerge in such a setting-both in terms of data and energy-data aggregation appears as a key element in reducing the amount of traffic in wireless sensor networks and achieving energy conservation. Probabilistic frameworks have been introduced as operational efficient and performance effective solutions for data aggregation in distributed sensor networks. In this work, we introduce an overall optimization approach that improves and complements such frameworks towards identifying the optimal probability for a node to aggregate packets as well as the optimal aggregation period that a node should wait for performing aggregation, so as to minimize the overall energy consumption, while satisfying certain imposed delay constraints. Primal dual decomposition is employed to solve the corresponding optimization problem while simulation results demonstrate the operational efficiency of the proposed approach under different traffic and topology scenarios.

  15. Efficient Inhibition of Protein Aggregation, Disintegration of Aggregates, and Lowering of Cytotoxicity by Green Tea Polyphenol-Based Self-Assembled Polymer Nanoparticles.

    PubMed

    Debnath, Koushik; Shekhar, Shashi; Kumar, Vipendra; Jana, Nihar R; Jana, Nikhil R

    2016-08-10

    Green tea polyphenol epigallocatechin-3-gallate (EGCG) is known for its antiamyloidogenic property, and it is observed that molecular EGCG binds with amyloid structure, redirects fibrillation kinetics, remodels mature fibril, and lowers the amyloid-derived toxicity. However, this unique property of EGCG is difficult to utilize because of their poor chemical stability and substandard bioavailability. Here we report a nanoparticle form of EGCG of 25 nm size (nano-EGCG) which is 10-100 times more efficient than molecular EGCG in inhibiting protein aggregation, disintegrating mature protein aggregates, and lowering amyloidogenic cytotoxicity. The most attractive advantage of nano-EGCG is that it efficiently protects neuronal cells from the toxic effect of extracellular amyloid beta or intracellular mutant huntingtin protein aggregates by preventing their aggregation. We found that the better performance of nano-EGCG is due to the combined effect of increased chemical stability of EGCG against degradation, stronger binding with protein aggregates, and efficient entry into the cell for interaction with aggregated protein structure. This result indicates that the nanoparticle form of antiamyloidogenic molecules can be more powerful in prevention and curing of protein aggregation derived diseases. PMID:27427935

  16. A new efficient method for calculation of Frenkel exciton parameters in molecular aggregates

    NASA Astrophysics Data System (ADS)

    Plötz, Per-Arno; Niehaus, Thomas; Kühn, Oliver

    2014-05-01

    The Frenkel exciton Hamiltonian is at the heart of many simulations of excitation energy transfer in molecular aggregates. It separates the aggregate into Coulomb-coupled monomers. Here it is shown that the respective parameters, i.e., monomeric excitation energies and Coulomb couplings between transition densities can be efficiently calculated using time-dependent tight-binding-based density functional theory (TD-DFTB). Specifically, Coulomb couplings are expressed in terms of self-consistently determined Mulliken transition charges. The approach is applied to two dimer systems. First, formaldehyde oxime for which a detailed comparison with standard DFT using the B3LYP and the PBE functionals as well as with SCS-CC2 is provided. Second, the Coulomb coupling is explored in dependence on the intermolecular coordinates for a perylene bisimide dimer. This provides structural evidence for the previously observed biphasic aggregation behavior of this dye.

  17. Aggregation and morphology control enables polymer solar cells with efficiencies near 11.5% (Presentation Recording)

    NASA Astrophysics Data System (ADS)

    Yan, He

    2015-10-01

    Current high-efficiency (>9.0%) PSCs are restricted to materials combinations that are based on limited donor polymers and only one specific fullerene acceptor, PC71BM. Furthermore, best-efficiency PSCs are mostly based on relatively thin (100 nm) active layers. Here we first report multiple cases of high-performance thick-film (300 nm) PSCs (efficiencies up to 10.8%, fill factors up to 77%) based on conventional PCBM and many non-PCBM fullerenes. Our simple aggregation control and materials design rules allowed us to develop, within a short time, three new donor polymer, six fullerenes (including C60-based fullerenes), and over ten polymer:fullerene combinations, all of which yielded higher efficiency than previous state of art devices (~9.5%). The common structural feature of the three new donor polymers, the 2-octyldodecyl (2OD) alkyl chains sitting on quaterthiophene, causes a temperature-dependent aggregation behavior that allows for the processing of the polymer solutions at moderately elevated temperature, and more importantly, controlled aggregation and strong crystallization of the polymer during the film cooling and drying process. This results in a well-controlled and near-ideal polymer:fullerene morphology (containing highly crystalline, preferentially orientated, yet small polymer domains) that is controlled by polymer aggregation during warm casting and thus insensitive to the choice of fullerenes. The 2OD structural motif is then further applied to several other polymer backbones and produces three additional polymers with efficiencies between 10-11.5%. Our best efficiency (11.5%) is achieved via the combination of new structural designs, interface and optical engineering and optimizations on the solvents and additives of the polymer:fullerene solution.

  18. Cost-Efficient and Multi-Functional Secure Aggregation in Large Scale Distributed Application

    PubMed Central

    Zhang, Ping; Li, Wenjun; Sun, Hua

    2016-01-01

    Secure aggregation is an essential component of modern distributed applications and data mining platforms. Aggregated statistical results are typically adopted in constructing a data cube for data analysis at multiple abstraction levels in data warehouse platforms. Generating different types of statistical results efficiently at the same time (or referred to as enabling multi-functional support) is a fundamental requirement in practice. However, most of the existing schemes support a very limited number of statistics. Securely obtaining typical statistical results simultaneously in the distribution system, without recovering the original data, is still an open problem. In this paper, we present SEDAR, which is a SEcure Data Aggregation scheme under the Range segmentation model. Range segmentation model is proposed to reduce the communication cost by capturing the data characteristics, and different range uses different aggregation strategy. For raw data in the dominant range, SEDAR encodes them into well defined vectors to provide value-preservation and order-preservation, and thus provides the basis for multi-functional aggregation. A homomorphic encryption scheme is used to achieve data privacy. We also present two enhanced versions. The first one is a Random based SEDAR (REDAR), and the second is a Compression based SEDAR (CEDAR). Both of them can significantly reduce communication cost with the trade-off lower security and lower accuracy, respectively. Experimental evaluations, based on six different scenes of real data, show that all of them have an excellent performance on cost and accuracy. PMID:27551747

  19. Cost-Efficient and Multi-Functional Secure Aggregation in Large Scale Distributed Application.

    PubMed

    Zhang, Ping; Li, Wenjun; Sun, Hua

    2016-01-01

    Secure aggregation is an essential component of modern distributed applications and data mining platforms. Aggregated statistical results are typically adopted in constructing a data cube for data analysis at multiple abstraction levels in data warehouse platforms. Generating different types of statistical results efficiently at the same time (or referred to as enabling multi-functional support) is a fundamental requirement in practice. However, most of the existing schemes support a very limited number of statistics. Securely obtaining typical statistical results simultaneously in the distribution system, without recovering the original data, is still an open problem. In this paper, we present SEDAR, which is a SEcure Data Aggregation scheme under the Range segmentation model. Range segmentation model is proposed to reduce the communication cost by capturing the data characteristics, and different range uses different aggregation strategy. For raw data in the dominant range, SEDAR encodes them into well defined vectors to provide value-preservation and order-preservation, and thus provides the basis for multi-functional aggregation. A homomorphic encryption scheme is used to achieve data privacy. We also present two enhanced versions. The first one is a Random based SEDAR (REDAR), and the second is a Compression based SEDAR (CEDAR). Both of them can significantly reduce communication cost with the trade-off lower security and lower accuracy, respectively. Experimental evaluations, based on six different scenes of real data, show that all of them have an excellent performance on cost and accuracy. PMID:27551747

  20. Divergence of trends in US and UK aggregate exergy efficiencies 1960-2010.

    PubMed

    Brockway, Paul E; Barrett, John R; Foxon, Timothy J; Steinberger, Julia K

    2014-08-19

    National exergy efficiency analysis relates the quality of primary energy inputs to an economy with end useful work in sectoral energy uses such as transport, heat and electrical devices. This approach has been used by a range of authors to explore insights to macroscale energy systems and linkages with economic growth. However, these analyses use a variety of calculation methods with sometimes coarse assumptions, inhibiting comparisons. Therefore, building on previous studies, this paper first contributes toward a common useful work accounting framework, by developing more refined methodological techniques for electricity end use and transport exergy efficiencies. Second, to test this more consistent and granular approach, these advances are applied to the US and UK for 1960 to 2010. The results reveal divergent aggregate exergy efficiencies: US efficiency remains stable at around 11%, while UK efficiency rises from 9% to 15%. The US efficiency stagnation is due to "efficiency dilution", where structural shifts to lower efficiency consumption (e.g., air-conditioning) outweigh device-level efficiency gains. The results demonstrate this is an important area of research, with consequent implications for national energy efficiency policies.

  1. ISIS; An Information-efficient Spectral Imaging System

    SciTech Connect

    Boye, C.A.; Descour, M.R.; Gentry, S.M.; Grotbeck, C.L.; Stallard, B.R.; Sweatt, W.C.

    1998-07-19

    A specialized hyperspectral imager has been developed that preprocesses the spectra from an image before the light reaches the detectors. This "optical computer" does not allow the flexibility of digital post-processing. However, the processing is done in real time and the system can examine = 2 x 10{sup 6} scene pixels/sec. Therefore, outdoors it could search for pollutants, vegetation types, minerals, or man-made objects. On a high- speed production line it could identify defects in sheet products like plastic wrap or film, or on painted or plastic parts. ISIS is a line scan imager. A spectrally dispersed slit image is projected on a Spatial Light Modulator. The SLM is programmed to take the inner product of the spectral intensity vector and a spectral basis vector. The SLM directs the positive and negative parts of the inner product to different linear detector arrays so the signal difference equals the inner product. We envision a system with one telescope and =4 SLMS.

  2. An Efficient Method to Calculate the Aggregated Isotopic Distribution and Exact Center-Masses

    NASA Astrophysics Data System (ADS)

    Claesen, Jürgen; Dittwald, Piotr; Burzykowski, Tomasz; Valkenborg, Dirk

    2012-04-01

    In this article, we present a computation- and memory-efficient method to calculate the probabilities of occurrence and exact center-masses of the aggregated isotopic distribution of a molecule. The method uses fundamental mathematical properties of polynomials given by the Newton-Girard theorem and Viete's formulae. The calculation is based on the atomic composition of the molecule and the natural abundances of the elemental isotopes in normal terrestrial matter. To evaluate the performance of the proposed method, which we named BRAIN, we compare it with the results obtained from five existing software packages ( IsoPro, Mercury, Emass, NeutronCluster, and IsoDalton) for 10 biomolecules. Additionally, we compare the computed mass centers with the results obtained by calculating, and subsequently aggregating, the fine isotopic distribution for two of the exemplary biomolecules. The algorithm will be made available as a Bioconductor package in R, and is also available upon request.

  3. High Efficiency Near Infrared Spectrometer for Zodiacal Light Spectral Study

    NASA Technical Reports Server (NTRS)

    Kutyrea, A. S.

    2008-01-01

    We are developing a near infrared spectrometer for measuring solar absorption lines in the zodiacal light in the near infrared region. R. Reynolds at el. (2004, ApJ 61 2, 1206) demonstrated that observing single Fraunhofer line can be a powerful tool for extracting zodiacal light parameters based on their measurements of the profile of the Mg I lneat 5 184 A. We are extending this technique to the near infrared with the primary goal of measuring the absolute intensity of the zodiacal light. This measurement will provide the crucial information needed to accurately subtract zodiacal emission from the DIRBE measurements to get a much higher quality measurement of the extragalactic IR background. The instrument design is based on a dual Fabry-Perot interferometer with a narrow band filter. Its double etalon design allows to achieve high spectral contrast to reject the bright out of band telluric OH emission. High spectral contrast is absolutely necessary to achieve detection limits needed to accurately measure the intensity of the absorption line. We present the design, estimated performance of the instrument with the expected results of the observing program.

  4. The structural basis for optimal performance of oligothiophene-based fluorescent amyloid ligands: conformational flexibility is essential for spectral assignment of a diversity of protein aggregates.

    PubMed

    Klingstedt, Therése; Shirani, Hamid; Åslund, K O Andreas; Cairns, Nigel J; Sigurdson, Christina J; Goedert, Michel; Nilsson, K Peter R

    2013-07-29

    Protein misfolding diseases are characterized by deposition of protein aggregates, and optical ligands for molecular characterization of these disease-associated structures are important for understanding their potential role in the pathogenesis of the disease. Luminescent conjugated oligothiophenes (LCOs) have proven useful for optical identification of a broader subset of disease-associated protein aggregates than conventional ligands, such as thioflavin T and Congo red. Herein, the molecular requirements for achieving LCOs able to detect nonthioflavinophilic Aβ aggregates or non-congophilic prion aggregates, as well as spectrally discriminate Aβ and tau aggregates, were investigated. An anionic pentameric LCO was subjected to chemical engineering by: 1) replacing thiophene units with selenophene or phenylene moieties, or 2) alternating the anionic substituents along the thiophene backbone. In addition, two asymmetric tetrameric ligands were generated. Overall, the results from this study identified conformational freedom and extended conjugation of the conjugated backbone as crucial determinants for obtaining superior thiophene-based optical ligands for sensitive detection and spectral assignment of disease-associated protein aggregates.

  5. Power and spectrally efficient M-ARY QAM schemes for future mobile satellite communications

    NASA Technical Reports Server (NTRS)

    Sreenath, K.; Feher, K.

    1990-01-01

    An effective method to compensate nonlinear phase distortion caused by the mobile amplifier is proposed. As a first step towards the future use of spectrally efficient modulation schemes for mobile satellite applications, we have investigated effects of nonlinearities and the phase compensation method on 16-QAM. The new method provides about 2 dB savings in power for 16-QAM operation with cost effective amplifiers near saturation and thereby promising use of spectrally efficient linear modulation schemes for future mobile satellite applications.

  6. Efficient Online Aggregates in Dense-Region-Based Data Cube Representations

    NASA Astrophysics Data System (ADS)

    Haddadin, Kais; Lauer, Tobias

    In-memory OLAP systems require a space-efficient representation of sparse data cubes in order to accommodate large data sets. On the other hand, most efficient online aggregation techniques, such as prefix sums, are built on dense array-based representations. These are often not applicable to real-world data due to the size of the arrays which usually cannot be compressed well, as most sparsity is removed during pre-processing. A possible solution is to identify dense regions in a sparse cube and only represent those using arrays, while storing sparse data separately, e.g. in a spatial index structure. Previous dense-region-based approaches have concentrated mainly on the effectiveness of the dense-region detection (i.e. on the space-efficiency of the result). However, especially in higher-dimensional cubes, data is usually more cluttered, resulting in a potentially large number of small dense regions, which negatively affects query performance on such a structure. In this paper, our focus is not only on space-efficiency but also on time-efficiency, both for the initial dense-region extraction and for queries carried out in the resulting hybrid data structure. We describe two methods to trade available memory for increased aggregate query performance. In addition, optimizations in our approach significantly reduce the time to build the initial data structure compared to former systems. Also, we present a straightforward adaptation of our approach to support multi-core or multi-processor architectures, which can further enhance query performance. Experiments with different real-world data sets show how various parameter settings can be used to adjust the efficiency and effectiveness of our algorithms.

  7. Spatial and temporal control of cell aggregation efficiently directs human pluripotent stem cells towards neural commitment.

    PubMed

    Miranda, Cláudia C; Fernandes, Tiago G; Pascoal, Jorge F; Haupt, Simone; Brüstle, Oliver; Cabral, Joaquim M S; Diogo, Maria Margarida

    2015-10-01

    3D suspension culture is generally considered a promising method to achieve efficient expansion and controlled differentiation of human pluripotent stem cells (hPSCs). In this work, we focused on developing an integrated culture platform for expansion and neural commitment of hPSCs into neural precursors using 3D suspension conditions and chemically-defined culture media. We evaluated different inoculation methodologies for hPSC expansion as 3D aggregates and characterized the resulting cultures in terms of aggregate size distribution. It was demonstrated that upon single-cell inoculation, after four days of culture, 3D aggregates were composed of homogenous populations of hPSC and were characterized by an average diameter of 139 ± 26 μm, which was determined to be the optimal size to initiate neural commitment. Temporal analysis revealed that upon neural specification it is possible to maximize the percentage of neural precursor cells expressing the neural markers Sox1 and Pax6 after nine days of culture. These results highlight our ability to define a robust method for production of hPSC-derived neural precursors that minimizes processing steps and that constitutes a promising alternative to the traditional planar adherent culture system due to a high potential for scaling-up. PMID:25866360

  8. Time-dependent aggregation-induced enhanced emission, absorption spectral broadening, and aggregation morphology of a novel perylene derivative with a large D-π-A structure.

    PubMed

    Yang, Long; Yu, Yuyan; Zhang, Jin; Ge, Feijie; Zhang, Jianling; Jiang, Long; Gao, Fang; Dan, Yi

    2015-05-01

    Strong aggregation-caused quenching of perylene diimides (PDI) is changed successfully by simple chemical modification with two quinoline moieties through C=C at the bay positions to obtain aggregation-induced enhanced emission (AIEE) of a perylene derivative (Cya-PDI) with a large π-conjugation system. Cya-PDI is weakly luminescent in the well-dispersed CH(3)CN or THF solutions and exhibits an evident time-dependent AIEE and absorption spectra broadening in the aggregated state. In addition, morphological inspection demonstrates that the morphology of the aggregated form of Cya-PDI molecules changed from plate-shaped to rod-like aggregates under the co-effects of time and water. An edge-to-face arrangement of aggregation was proposed and discussed. The fact that the Cya-PDI aggregates show a broad absorption covering the whole visible-light range and strong intermolecular interaction through π-π stacking in the solid state makes them promising materials for optoelectric applications.

  9. Hybrid Spectral Efficient Cellular Network Deployment to Reduce RF Pollution

    NASA Astrophysics Data System (ADS)

    Katiyar, Sumit; K. Jain, R.; K. Agrawal, N.

    2012-09-01

    As the mobile telecommunication systems are growing tremendously all over the world, the numbers of handheld and base stations are also rapidly growing and it became very popular to see these base stations distributed everywhere in the neighborhood and on roof tops which has caused a considerable amount of panic to the public in Palestine concerning wither the radiated electromagnetic fields from these base stations may cause any health effect or hazard. Recently UP High Court in India ordered for removal of BTS towers from residential area, it has created panic among cellular communication network designers too. Green cellular networks could be a solution for the above problem. This paper deals with green cellular networks with the help of multi-layer overlaid hierarchical structure (macro / micro / pico / femto cells). Macrocell for area coverage, micro for pedestrian and a slow moving traffic while pico for indoor use and femto for individual high capacity users. This could be the answer of the problem of energy conservation and enhancement of spectral density also.

  10. Feature activated molecular dynamics: an efficient approach for atomistic simulation of solid-state aggregation phenomena.

    PubMed

    Prasad, Manish; Sinno, Talid

    2004-11-01

    An efficient approach is presented for performing efficient molecular dynamics simulations of solute aggregation in crystalline solids. The method dynamically divides the total simulation space into "active" regions centered about each minority species, in which regular molecular dynamics is performed. The number, size, and shape of these regions is updated periodically based on the distribution of solute atoms within the overall simulation cell. The remainder of the system is essentially static except for periodic rescaling of the entire simulation cell in order to balance the pressure between the isolated molecular dynamics regions. The method is shown to be accurate and robust for the Environment-Dependant Interatomic Potential (EDIP) for silicon and an Embedded Atom Method potential (EAM) for copper. Several tests are performed beginning with the diffusion of a single vacancy all the way to large-scale simulations of vacancy clustering. In both material systems, the predicted evolutions agree closely with the results of standard molecular dynamics simulations. Computationally, the method is demonstrated to scale almost linearly with the concentration of solute atoms, but is essentially independent of the total system size. This scaling behavior allows for the full dynamical simulation of aggregation under conditions that are more experimentally realizable than would be possible with standard molecular dynamics.

  11. Efficient Spectral Endmember Detection Onboard the EO-1 Spacecraft

    NASA Technical Reports Server (NTRS)

    Bornstein, Ben; Thompson, David R.; Tran, Daniel; Bue, Brian; Chien, Steve; Castano, Rebecca

    2011-01-01

    Spaceflight and planetary exploration place severe constraints on the available bandwidth for downlinking large hyperspectral images. In addition, communications with spacecraft often occur intermittently, so mission-relevant hyperspectral data must wait for analysis on the ground before it can inform spacecraft activity planning. Onboard endmember detection can help alleviate these problems. It enables novelty detection and target identification for scheduling follow-up activities such as additional observation by narrow field of view instruments. Additionally, endmember analysis can facilitate data summary for downlink. This work describes a planned experiment of selective downlink by the EO-1 autonomous spacecraft. Here an efficient superpixel endmember detection algorithm keeps to the limited computational constraints of the flight processor. Tests suggest the procedure could enable significant improvements in downlink efficiency.

  12. Stress wave communication in concrete: II. Evaluation of low voltage concrete stress wave communications utilizing spectrally efficient modulation schemes with PZT transducers

    NASA Astrophysics Data System (ADS)

    Siu, Sam; Qing, Ji; Wang, Kun; Song, Gangbing; Ding, Zhi

    2014-12-01

    Piezoelectric materials, traditionally used for structural health monitoring, have recently been used to implement stress wave communications. Within a protective encasing we fabricate a smart aggregate which enables transmission and reception of modulated stress waves for digital communication within concrete. Our research focuses on building a high efficiency stress wave communication system and comparing the performance of phase shift keying (PSK) with quadrature amplitude modulation (QAM). Our experiments evaluate the performance of QPSK and 16QAM implemented with our stress wave communication system at a transmit voltage ranging from 32 dBV to 37 dBV. We also demonstrate the increase in spectral efficiency of 16QAM compared to QPSK.

  13. Induction of efficient energy dissipation in the isolated light-harvesting complex of Photosystem II in the absence of protein aggregation.

    PubMed

    Ilioaia, Cristian; Johnson, Matthew P; Horton, Peter; Ruban, Alexander V

    2008-10-24

    Under excess illumination, the Photosystem II light-harvesting antenna of higher plants has the ability to switch into an efficient photoprotective mode, allowing safe dissipation of excitation energy into heat. In this study, we show induction of the energy dissipation state, monitored by chlorophyll fluorescence quenching, in the isolated major light-harvesting complex (LHCII) incorporated into a solid gel system. Removal of detergent caused strong fluorescence quenching, which was totally reversible. Singlet-singlet annihilation and gel electrophoresis experiments suggested that the quenched complexes were in the trimeric not aggregated state. Both the formation and recovery of this quenching state were inhibited by a cross-linker, implying involvement of conformational changes. Absorption and CD measurements performed on the samples in the quenched state revealed specific alterations in the spectral bands assigned to the red forms of chlorophyll a, neoxanthin, and lutein 1 molecules. The majority of these alterations were similar to those observed during LHCII aggregation. This suggests that not the aggregation process as such but rather an intrinsic conformational transition in the complex is responsible for establishment of quenching. 77 K fluorescence measurements showed red-shifted chlorophyll a fluorescence in the 690-705 nm region, previously observed in aggregated LHCII. The fact that all spectral changes associated with the dissipative mode observed in the gel were different from those of the partially denatured complex strongly argues against the involvement of protein denaturation in the observed quenching. The implications of these findings for proposed mechanisms of energy dissipation in the Photosystem II antenna are discussed.

  14. A Gossip-based Energy Efficient Protocol for Robust In-network Aggregation in Wireless Sensor Networks

    NASA Astrophysics Data System (ADS)

    Fauji, Shantanu

    We consider the problem of energy efficient and fault tolerant in--network aggregation for wireless sensor networks (WSNs). In-network aggregation is the process of aggregation while collecting data from sensors to the base station. This process should be energy efficient due to the limited energy at the sensors and tolerant to the high failure rates common in sensor networks. Tree based in--network aggregation protocols, although energy efficient, are not robust to network failures. Multipath routing protocols are robust to failures to a certain degree but are not energy efficient due to the overhead in the maintenance of multiple paths. We propose a new protocol for in-network aggregation in WSNs, which is energy efficient, achieves high lifetime, and is robust to the changes in the network topology. Our protocol, gossip--based protocol for in-network aggregation (GPIA) is based on the spreading of information via gossip. GPIA is not only adaptive to failures and changes in the network topology, but is also energy efficient. Energy efficiency of GPIA comes from all the nodes being capable of selective message reception and detecting convergence of the aggregation early. We experimentally show that GPIA provides significant improvement over some other competitors like the Ridesharing, Synopsis Diffusion and the pure version of gossip. GPIA shows ten fold, five fold and two fold improvement over the pure gossip, the synopsis diffusion and Ridesharing protocols in terms of network lifetime, respectively. Further, GPIA retains gossip's robustness to failures and improves upon the accuracy of synopsis diffusion and Ridesharing.

  15. VAP: a versatile aggregate profiler for efficient genome-wide data representation and discovery.

    PubMed

    Coulombe, Charles; Poitras, Christian; Nordell-Markovits, Alexei; Brunelle, Mylène; Lavoie, Marc-André; Robert, François; Jacques, Pierre-Étienne

    2014-07-01

    The analysis of genomic data such as ChIP-Seq usually involves representing the signal intensity level over genes or other genetic features. This is often illustrated as a curve (representing the aggregate profile of a group of genes) or as a heatmap (representing individual genes). However, no specific resource dedicated to easily generating such profiles is currently available. We therefore built the versatile aggregate profiler (VAP), designed to be used by experimental and computational biologists to generate profiles of genomic datasets over groups of regions of interest, using either an absolute or a relative method. Graphical representation of the results is automatically generated, and subgrouping can be performed easily, based on the orientation of the flanking annotations. The outputs include statistical measures to facilitate comparisons between groups or datasets. We show that, through its intuitive design and flexibility, VAP can help avoid misinterpretations of genomics data. VAP is highly efficient and designed to run on laptop computers by using a memory footprint control, but can also be easily compiled and run on servers. VAP is accessible at http://lab-jacques.recherche.usherbrooke.ca/vap/.

  16. Charge Photogeneration Experiments and Theory in Aggregated Squaraine Donor Materials for Improved Organic Solar Cell Efficiencies

    NASA Astrophysics Data System (ADS)

    Spencer, Susan Demetra

    Fossil fuel consumption has a deleterious effect on humans, the economy, and the environment. Renewable energy technologies must be identified and commercialized as quickly as possible so that the transition to renewables can happen at a minimum of financial and societal cost. Organic photovoltaic cells offer an inexpensive and disruptive energy technology, if the scientific challenges of understanding charge photogeneration in a bulk heterojunction material can be overcome. At RIT, there is a strong focus on creating new materials that can both offer fundamentally important scientific results relating to quantum photophysics, and simultaneously assist in the development of strong candidates for future commercialized technology. In this presentation, the results of intensive materials characterization of a series of squaraine small molecule donors will be presented, as well as a full study of the fabrication and optimization required to achieve >4% photovoltaic cell efficiency. A relationship between the molecular structure of the squaraine and its ability to form nanoscale aggregates will be explored. Squaraine aggregation will be described as a unique optoelectronic probe of the structure of the bulk heterojunction. This relationship will then be utilized to explain changes in crystallinity that impact the overall performance of the devices. Finally, a predictive summary will be given for the future of donor material research at RIT.

  17. VAP: a versatile aggregate profiler for efficient genome-wide data representation and discovery.

    PubMed

    Coulombe, Charles; Poitras, Christian; Nordell-Markovits, Alexei; Brunelle, Mylène; Lavoie, Marc-André; Robert, François; Jacques, Pierre-Étienne

    2014-07-01

    The analysis of genomic data such as ChIP-Seq usually involves representing the signal intensity level over genes or other genetic features. This is often illustrated as a curve (representing the aggregate profile of a group of genes) or as a heatmap (representing individual genes). However, no specific resource dedicated to easily generating such profiles is currently available. We therefore built the versatile aggregate profiler (VAP), designed to be used by experimental and computational biologists to generate profiles of genomic datasets over groups of regions of interest, using either an absolute or a relative method. Graphical representation of the results is automatically generated, and subgrouping can be performed easily, based on the orientation of the flanking annotations. The outputs include statistical measures to facilitate comparisons between groups or datasets. We show that, through its intuitive design and flexibility, VAP can help avoid misinterpretations of genomics data. VAP is highly efficient and designed to run on laptop computers by using a memory footprint control, but can also be easily compiled and run on servers. VAP is accessible at http://lab-jacques.recherche.usherbrooke.ca/vap/. PMID:24753414

  18. Enhanced spectral efficiency using bandwidth switchable SAW filtering for mobile satellite communications systems

    NASA Technical Reports Server (NTRS)

    Peach, Robert; Malarky, Alastair

    1990-01-01

    Currently proposed mobile satellite communications systems require a high degree of flexibility in assignment of spectral capacity to different geographic locations. Conventionally this results in poor spectral efficiency which may be overcome by the use of bandwidth switchable filtering. Surface acoustic wave (SAW) technology makes it possible to provide banks of filters whose responses may be contiguously combined to form variable bandwidth filters with constant amplitude and phase responses across the entire band. The high selectivity possible with SAW filters, combined with the variable bandwidth capability, makes it possible to achieve spectral efficiencies over the allocated bandwidths of greater than 90 percent, while retaining full system flexibility. Bandwidth switchable SAW filtering (BSSF) achieves these gains with a negligible increase in hardware complexity.

  19. Biomedical Applications of the Information-efficient Spectral Imaging Sensor (ISIS)

    SciTech Connect

    Gentry, S.M.; Levenson, R.

    1999-01-21

    The Information-efficient Spectral Imaging Sensor (ISIS) approach to spectral imaging seeks to bridge the gap between tuned multispectral and fixed hyperspectral imaging sensors. By allowing the definition of completely general spectral filter functions, truly optimal measurements can be made for a given task. These optimal measurements significantly improve signal-to-noise ratio (SNR) and speed, minimize data volume and data rate, while preserving classification accuracy. The following paper investigates the application of the ISIS sensing approach in two sample biomedical applications: prostate and colon cancer screening. It is shown that in these applications, two to three optimal measurements are sufficient to capture the majority of classification information for critical sample constituents. In the prostate cancer example, the optimal measurements allow 8% relative improvement in classification accuracy of critical cell constituents over a red, green, blue (RGB) sensor. In the colon cancer example, use of optimal measurements boost the classification accuracy of critical cell constituents by 28% relative to the RGB sensor. In both cases, optimal measurements match the performance achieved by the entire hyperspectral data set. The paper concludes that an ISIS style spectral imager can acquire these optimal spectral images directly, allowing improved classification accuracy over an RGB sensor. Compared to a hyperspectral sensor, the ISIS approach can achieve similar classification accuracy using a significantly lower number of spectral samples, thus minimizing overall sample classification time and cost.

  20. Leveraging Human-environment Systems in Residential Buildings for Aggregate Energy Efficiency and Sustainability

    NASA Astrophysics Data System (ADS)

    Xu, Xiaoqi

    Reducing the energy consumed in the built environment is a key objective in many sustainability initiatives. Existing energy saving methods have consisted of physical interventions to buildings and/or behavioral modifications of occupants. However, such methods may not only suffer from their own disadvantages, e.g. high cost and transient effect, but also lose aggregate energy saving potential due to the oftentimes-associated single-building-focused view and an isolated examination of occupant behaviors. This dissertation attempts to overcome the limitations of traditional energy saving research and practical approaches, and enhance residential building energy efficiency and sustainability by proposing innovative energy strategies from a holistic perspective of the aggregate human-environment systems. This holistic perspective features: (1) viewing buildings as mutual influences in the built environment, (2) leveraging both the individual and contextualized social aspects of occupant behaviors, and (3) incorporating interactions between the built environment and human behaviors. First, I integrate three interlinked components: buildings, residents, and the surrounding neighborhood, and quantify the potential energy savings to be gained from renovating buildings at the inter-building level and leveraging neighborhood-contextualized occupant social networks. Following the confirmation of both the inter-building effect among buildings and occupants' interpersonal influence on energy conservation, I extend the research further by examining the synergy that may exist at the intersection between these "engineered" building networks and "social" peer networks, focusing specifically on the additional energy saving potential that could result from interactions between the two components. Finally, I seek to reach an alignment of the human and building environment subsystems by matching the thermostat preferences of each household with the thermal conditions within their

  1. Highly efficient spectrally encoded imaging using a 45° tilted fiber grating.

    PubMed

    Wang, Guoqing; Wang, Chao; Yan, Zhijun; Zhang, Lin

    2016-06-01

    A novel highly efficient, fiber-compatible spectrally encoded imaging (SEI) system using a 45° tilted fiber grating (TFG) is proposed and experimentally demonstrated for the first time, to the best of our knowledge. The TFG serves as an in-fiber lateral diffraction element, eliminating the need for bulky and lossy free-space diffraction gratings in conventional SEI systems. Under proper polarization control, due to the strong tilted reflection, the 45° TFG offers a diffraction efficiency as high as 93.5%. Our new design significantly reduces the volume of the SEI system and improves energy efficiency and system stability. As a proof-of-principle experiment, spectrally encoded imaging of a customer-designed sample (9.6  mm×3.0  mm) using the TFG-based system is demonstrated. The lateral resolution of the SEI system is measured to be 42 μm in our experiment.

  2. Highly efficient spectrally encoded imaging using a 45° tilted fiber grating.

    PubMed

    Wang, Guoqing; Wang, Chao; Yan, Zhijun; Zhang, Lin

    2016-06-01

    A novel highly efficient, fiber-compatible spectrally encoded imaging (SEI) system using a 45° tilted fiber grating (TFG) is proposed and experimentally demonstrated for the first time, to the best of our knowledge. The TFG serves as an in-fiber lateral diffraction element, eliminating the need for bulky and lossy free-space diffraction gratings in conventional SEI systems. Under proper polarization control, due to the strong tilted reflection, the 45° TFG offers a diffraction efficiency as high as 93.5%. Our new design significantly reduces the volume of the SEI system and improves energy efficiency and system stability. As a proof-of-principle experiment, spectrally encoded imaging of a customer-designed sample (9.6  mm×3.0  mm) using the TFG-based system is demonstrated. The lateral resolution of the SEI system is measured to be 42 μm in our experiment. PMID:27244373

  3. Efficient global wave propagation adapted to 3-D structural complexity: a pseudo-spectral/spectral-element approach

    NASA Astrophysics Data System (ADS)

    Leng, Kuangdai; Nissen-Meyer, Tarje; van Driel, Martin

    2016-09-01

    We present a new, computationally efficient numerical method to simulate global seismic wave propagation in realistic 3-D Earth models. We characterize the azimuthal dependence of 3-D wavefields in terms of Fourier series, such that the 3-D equations of motion reduce to an algebraic system of coupled 2-D meridian equations, which is then solved by a 2-D spectral element method (SEM). Computational efficiency of such a hybrid method stems from lateral smoothness of 3-D Earth models and axial singularity of seismic point sources, which jointly confine the Fourier modes of wavefields to a few lower orders. We show novel benchmarks for global wave solutions in 3-D structures between our method and an independent, fully discretized 3-D SEM with remarkable agreement. Performance comparisons are carried out on three state-of-the-art tomography models, with seismic period ranging from 34s down to 11s. It turns out that our method has run up to two orders of magnitude faster than the 3-D SEM, featured by a computational advantage expanding with seismic frequency.

  4. Evaluating spectral indices and spectral mixture analysis for assessing fire severity and adjusting burning efficiency using Landsat data

    NASA Astrophysics Data System (ADS)

    Veraverbeke, S.; Hook, S.

    2012-04-01

    Fire severity data are of paramount importance to (i) organize post-fire rehabilitation plans and (ii) reduce uncertainties in wildfire emission estimates by allowing spatio-temporal variability in burning efficiency values. We have used a Landsat Thematic Mapper (TM) image to assess fire severity of the large 2011 Wallow fire in Arizona, USA. The Normalized Burn Ratio (NBR), differenced NBR (dNBR), Relative dNBR (RdNBR) and the char fraction estimated by Spectral Mixture Analysis (SMA) were evaluated. Geo Composite Burn Index (GeoCBI) and vegetation mortality data were used as ground truth. Of all remotely sensed measures tested the dNBR had the highest performance (GeoCBI-dNBR R2 = 0.84 and % black trees-dNBR R2 = 0.91), which supports the operational use of the dNBR for post-fire management. Without initial calibration with field data, however, dNBR values lack biophysical meaning. The SMA-derived char fraction also had moderate-high correlations with the field data (GeoCBI-char fraction R2 = 0.66 and % black trees-char fraction R2 = 0.82). The char fractions provide a direct mechanistic link with the fire processes that occurred on the ground. Such data have big potential to adjust burning efficiency values. This is of great importance to reduce uncertainties in wildfire emission estimates.

  5. Principles and satellite applications of the information-efficient spectral imaging sensor

    SciTech Connect

    Stallard, B.R.; Gentry, S.M.; Sweatt, W.C.; Motomatsu, S.E.; Boye, C.A.

    1997-06-01

    Remote sensing by satellite is increasingly important to the national government for treaty verification, battlefield monitoring, and other activities. In addition, civilian oriented applications are increasing in areas such as geology, meteorology, ecology, forestry, and agriculture. Spectral imaging sensors, an important subclass of satellite-borne sensors, have been shown to provide information far superior to that of conventional panchromatic images in many of these applications. However, spectral imaging adds at least two challenges to the already difficult task of viewing the earth from a distance of hundreds of kilometers. First, with numerous spectral channels, the signal-to-noise ratio is decreased in any one channel. Second the data rates of spectral imaging sensors (10 Mbytes/sec, or more) stress the limits of the electronic systems, including the onboard data storage, the downlink bandwidth, and the earthbound image analysis system. This report describes a new concept which the authors have dubbed the information-efficient spectral imaging sensor (ISIS) which addresses these two problems. In addition, it offers the promise of nearly real-time identification of targets.

  6. Construction aggregates

    USGS Publications Warehouse

    Tepordei, V.V.

    1995-01-01

    Part of the 1994 Industrial Minerals Review. The production, consumption, and applications of construction aggregates are reviewed. In 1994, the production of construction aggregates, which includes crushed stone and construction sand and gravel combined, increased 7.7 percent to 2.14 Gt compared with the previous year. These record production levels are mostly a result of funding for highway construction work provided by the Intermodal Surface Transportation Efficiency Act of 1991. Demand is expected to increase for construction aggregates in 1995.

  7. Efficient rational Chebyshev pseudo-spectral method with domain decomposition for optical waveguides modal analysis.

    PubMed

    Abdrabou, Amgad; Heikal, A M; Obayya, S S A

    2016-05-16

    We propose an accurate and computationally efficient rational Chebyshev multi-domain pseudo-spectral method (RC-MDPSM) for modal analysis of optical waveguides. For the first time, we introduce rational Chebyshev basis functions to efficiently handle semi-infinite computational subdomains. In addition, the efficiency of these basis functions is enhanced by employing an optimized algebraic map; thus, eliminating the use of PML-like absorbing boundary conditions. For leaky modes, we derived a leaky modes boundary condition at the guide-substrate interface providing an efficient technique to accurately model leaky modes with very small refractive index imaginary part. The efficiency and numerical precision of our technique are demonstrated through the analysis of high-index contrast dielectric and plasmonic waveguides, and the highly-leaky ARROW structure; where finding ARROW leaky modes using our technique clearly reflects its robustness.

  8. Elastic Optical Path Network Architecture: Framework for Spectrally-Efficient and Scalable Future Optical Networks

    NASA Astrophysics Data System (ADS)

    Jinno, Masahiko; Takara, Hidehiko; Sone, Yoshiaki; Yonenaga, Kazushige; Hirano, Akira

    This paper presents an elastic optical path network architecture as a novel networking framework to address the looming capacity crunch problem in internet protocol (IP) and optical networks. The basic idea is to introduce elasticity and adaptation into the optical domain to yield spectrally-efficient optical path accommodation, heightened network scalability through IP traffic offloading to the elastic optical layer, and enhanced survivability for serious disasters.

  9. Reliable and efficient program for fitting Galatry and Voigt profiles to spectral data on multiple lines.

    PubMed

    Ouyang, X; Varghese, P L

    1989-04-15

    Experimental data with multiple overlapping spectral lines must often be fitted to theoretical line shape models. This paper describes an efficient program for performing least-squares fits of such data to Galatry and Voigt profiles. The algorithm and program design considerations are presented in detail, and some examples are given to demonstrate its use. The procedure described in this paper may also be used for more complex line shape profiles. PMID:20548696

  10. Spectrally Efficient Underwater Acoustic Communications: Channel Characterization and Design Aspects for OFDM

    NASA Astrophysics Data System (ADS)

    Radosevic, Andreja

    In this dissertation, we consider design aspects of spectrally efficient underwater acoustic (UWA) communications. In particular, we first focus on statistical characterization and capacity evaluation of shallow water acoustic communications channels. Wideband single-carrier and multi-carrier probe signals are employed during the Kauai Acoustic Communications MURI 2008 (KAM08) and 2011 (KAM11) experiments, to measure the time-varying channel response, and to estimate its statistical properties and capacity that play an important role in the design of spectrally efficient communication systems. Besides the capacity analysis for unconstrained inputs, we determine new bounds on the achievable information rate for discrete-time Gaussian channels with inter-symbol interference and independent and uniformly distributed channel input symbols drawn from finite-order modulation alphabets. Specifically, we derived new bounds on the achievable rates for sparse channels with long memory. Furthermore, we explore design aspects of adaptive modulation based on orthogonal frequency division multiplexing (OFDM) for UWA communications, and study its performance using real-time at-sea experiments. Lastly, we investigate a channel estimation (CE) method for improving the spectral efficiency of UWA communications. Specifically, we determine the performance of a selective decision directed (DD) CE method for UWA OFDM-based communications.

  11. Building up low-complexity spectrally-efficient Terabit superchannels by receiver-side duobinary shaping.

    PubMed

    Li, Jianqiang; Sjödin, Martin; Karlsson, Magnus; Andrekson, Peter A

    2012-04-23

    Recently, an increasing interest has been put on spectrally-efficient multi-carrier superchannels for beyond 100G. Apart from orthogonal frequency-division multiplexing (OFDM) and Nyquist wavelength-division multiplexing (WDM), another low-complexity WDM approach based on transmitter-side pre-filtering and receiver-side duobinary shaping is proposed to build up multi-carrier superchannels. This approach is referred to as receiver-side duobinary-shaped WDM (RS-DBS-WDM). Generation and transmission of a 1.232-Tbit/s 11-carrier superchannel is experimentally demonstrated. The superchannel signal can be well fit inside the passband of multiple 300-GHz reconfigurable optical add and drop multiplexers (ROADMs). In the superchannel scenario, the proposed RS-DBS-WDM is qualitatively compared with OFDM and Nyquist-WDM in terms of implementation complexity. In sum, the proposed RS-DBS-WDM approach features high transceiver analog-bandwidth efficiency, high spectral-efficiency, the absence of specific spectral manipulation, compatibility with conventional WDM technologies and coherent detection algorithms, and comparable implementation penalty.

  12. Augmenting the spectral efficiency of enhanced PAM-DMT-based optical wireless communications.

    PubMed

    Islim, Mohamed Sufyan; Haas, Harald

    2016-05-30

    The energy efficiency of pulse-amplitude-modulated discrete multitone modulation (PAM-DMT) decreases as the modulation order of M-PAM modulation increases. Enhanced PAM-DMT (ePAM-DMT) was proposed as a solution to the reduced energy efficiency of PAM-DMT. This was achieved by allowing multiple streams of PAM-DMT to be superimposed and successively demodulated at the receiver side. In order to maintain a distortion-free unipolar ePAM-DMT system, the multiple time-domain PAM-DMT streams are required to be aligned. However, aligning the antisymmetry in ePAM-DMT is complex and results in efficiency losses. In this paper, a novel simplified method to apply the superposition modulation on M-PAM modulated discrete multitone (DMT) is introduced. Contrary to ePAM-DMT, the signal generation of the proposed system, termed augmented spectral efficiency discrete multitone (ASE-DMT), occurs in the frequency domain. This results in an improved spectral and energy efficiency. The analytical bit error rate (BER) performance bound of the proposed system is derived and compared with Monte-Carlo simulations. The system performance is shown to offer significant electrical and optical energy savings compared with ePAM-DMT and DC-biased optical orthogonal frequency division multiplexing (DCO-OFDM).

  13. Augmenting the spectral efficiency of enhanced PAM-DMT-based optical wireless communications.

    PubMed

    Islim, Mohamed Sufyan; Haas, Harald

    2016-05-30

    The energy efficiency of pulse-amplitude-modulated discrete multitone modulation (PAM-DMT) decreases as the modulation order of M-PAM modulation increases. Enhanced PAM-DMT (ePAM-DMT) was proposed as a solution to the reduced energy efficiency of PAM-DMT. This was achieved by allowing multiple streams of PAM-DMT to be superimposed and successively demodulated at the receiver side. In order to maintain a distortion-free unipolar ePAM-DMT system, the multiple time-domain PAM-DMT streams are required to be aligned. However, aligning the antisymmetry in ePAM-DMT is complex and results in efficiency losses. In this paper, a novel simplified method to apply the superposition modulation on M-PAM modulated discrete multitone (DMT) is introduced. Contrary to ePAM-DMT, the signal generation of the proposed system, termed augmented spectral efficiency discrete multitone (ASE-DMT), occurs in the frequency domain. This results in an improved spectral and energy efficiency. The analytical bit error rate (BER) performance bound of the proposed system is derived and compared with Monte-Carlo simulations. The system performance is shown to offer significant electrical and optical energy savings compared with ePAM-DMT and DC-biased optical orthogonal frequency division multiplexing (DCO-OFDM). PMID:27410116

  14. Experimental feasibility of the airborne measurement of absolute oil fluorescence spectral conversion efficiency

    NASA Technical Reports Server (NTRS)

    Hoge, F. E.; Swift, R. N.

    1983-01-01

    Airborne lidar oil spill experiments carried out to determine the practicability of the AOFSCE (absolute oil fluorescence spectral conversion efficiency) computational model are described. The results reveal that the model is suitable over a considerable range of oil film thicknesses provided the fluorescence efficiency of the oil does not approach the minimum detection sensitivity limitations of the lidar system. Separate airborne lidar experiments to demonstrate measurement of the water column Raman conversion efficiency are also conducted to ascertain the ultimate feasibility of converting such relative oil fluorescence to absolute values. Whereas the AOFSCE model is seen as highly promising, further airborne water column Raman conversion efficiency experiments with improved temporal or depth-resolved waveform calibration and software deconvolution techniques are thought necessary for a final determination of suitability.

  15. H- and J-aggregation of fluorene-based chromophores.

    PubMed

    Deng, Yonghong; Yuan, Wen; Jia, Zhe; Liu, Gao

    2014-12-11

    Understanding of H- and J-aggregation behaviors in fluorene-based polymers is significant both for determining the origin of various red-shifted emissions occurring in blue-emitting polyfluorenes and for developing polyfluorene-based device performance. In this contribution, we demonstrate a new theory of the H- and J-aggregation of polyfluorenes and oligofluorenes, and understand the influence of chromosphere aggregation on their photoluminescent properties. H- and J-aggregates are induced by a continuous increasing concentration of the oligofluorene or polyfluorene solution. A relaxed molecular configuration is simulated to illustrate the spatial arrangement of the bonding of fluorenes. It is indicated that the relaxed state adopts a 21 helical backbone conformation with a torsion angle of 18° between two connected repeat units. This configuration makes the formation of H- and J-aggregates through the strong π-π interaction between the backbone rings. A critical aggregation concentration is observed to form H- and J-aggregates for both polyfluorenes and oligofluorenes. These aggregates show large spectral shifts and distinct shape changes in photoluminescent excitation (PLE) and emission (PL) spectroscopy. Compared with "isolated" chromophores, H-aggregates induce absorption spectral blue-shift and fluorescence spectral red-shift but largely reduce fluorescence efficiency. "Isolated" chromophores not only refer to "isolated molecules" but also include those associated molecules if their conjugated backbones are not compact enough to exhibit perturbed absorption and emission. J-aggregates induce absorption spectral red-shift and fluorescence spectral red-shift but largely enhance fluorescence efficiency. The PLE and PL spectra also show that J-aggregates dominate in concentrated solutions. Different from the excimers, the H- and J-aggregate formation changes the ground-state absorption of fluorene-based chromophores. H- and J-aggregates show changeable

  16. H- and J-aggregation of fluorene-based chromophores.

    PubMed

    Deng, Yonghong; Yuan, Wen; Jia, Zhe; Liu, Gao

    2014-12-11

    Understanding of H- and J-aggregation behaviors in fluorene-based polymers is significant both for determining the origin of various red-shifted emissions occurring in blue-emitting polyfluorenes and for developing polyfluorene-based device performance. In this contribution, we demonstrate a new theory of the H- and J-aggregation of polyfluorenes and oligofluorenes, and understand the influence of chromosphere aggregation on their photoluminescent properties. H- and J-aggregates are induced by a continuous increasing concentration of the oligofluorene or polyfluorene solution. A relaxed molecular configuration is simulated to illustrate the spatial arrangement of the bonding of fluorenes. It is indicated that the relaxed state adopts a 21 helical backbone conformation with a torsion angle of 18° between two connected repeat units. This configuration makes the formation of H- and J-aggregates through the strong π-π interaction between the backbone rings. A critical aggregation concentration is observed to form H- and J-aggregates for both polyfluorenes and oligofluorenes. These aggregates show large spectral shifts and distinct shape changes in photoluminescent excitation (PLE) and emission (PL) spectroscopy. Compared with "isolated" chromophores, H-aggregates induce absorption spectral blue-shift and fluorescence spectral red-shift but largely reduce fluorescence efficiency. "Isolated" chromophores not only refer to "isolated molecules" but also include those associated molecules if their conjugated backbones are not compact enough to exhibit perturbed absorption and emission. J-aggregates induce absorption spectral red-shift and fluorescence spectral red-shift but largely enhance fluorescence efficiency. The PLE and PL spectra also show that J-aggregates dominate in concentrated solutions. Different from the excimers, the H- and J-aggregate formation changes the ground-state absorption of fluorene-based chromophores. H- and J-aggregates show changeable

  17. Efficient spectral-Galerkin methods for fractional partial differential equations with variable coefficients

    NASA Astrophysics Data System (ADS)

    Mao, Zhiping; Shen, Jie

    2016-02-01

    Efficient spectral-Galerkin algorithms are developed to solve multi-dimensional fractional elliptic equations with variable coefficients in conserved form as well as non-conserved form. These algorithms are extensions of the spectral-Galerkin algorithms for usual elliptic PDEs developed in [24]. More precisely, for separable FPDEs, we construct a direct method by using a matrix diagonalization approach, while for non-separable FPDEs, we employ a preconditioned BICGSTAB method with a suitable separable FPDE with constant-coefficients as preconditioner. The cost of these algorithms is of O (N d + 1) flops where d is the space dimension. We derive rigorous weighted error estimates which provide more precise convergence rate for problems with singularities at boundaries. We also present ample numerical results to validate the algorithms and error estimates.

  18. Energy Efficient, Cross-Layer Enabled, Dynamic Aggregation Networks for Next Generation Internet

    NASA Astrophysics Data System (ADS)

    Wang, Michael S.

    monitoring capabilities to include real-time monitoring of OSNR and polarization mode dispersion (PMD) to enable dynamic wavelength switching and selective restoration. Chapter 4 explains the author?s contributions in designing dynamic networking at the sub-wavelength switching granularity, which can provide greater network efficiency due to its finer granularity. To support dynamic switching, regeneration, adding/dropping, and control decisions on each individual packet, the cross-layer enabled node architecture is enhanced with a FPGA controller that brings much more precise timing and control to the switching, OPM, and control planes. Furthermore, QoS-aware packet protection and dynamic switching, dropping, and regeneration functionalities were experimentally demonstrated in a multi-node network. Chapter 5 describes a technique to perform optical grooming, a process of optically combining multiple incoming data streams into a single data stream, which can simultaneously achieve greater bandwidth utilization and increased spectral efficiency. In addition, an experimental demonstration highlighting a fully functioning multi-node, agile optical networking platform is detailed. Finally, a summary and discussion of future work is provided in Chapter 6. The future of the Internet is very exciting, filled with not-yet-invented applications and services driven by cloud computing and Internet-of-Things. The author is cautiously optimistic that agile, dynamically reconfigurable optical networking is the solution to realizing this future.

  19. Designing and optimizing highly efficient grating for high-brightness laser based on spectral beam combining

    SciTech Connect

    Yang, Ying-Ying E-mail: yangyy@semi.ac.cn; Zhao, Ya-Ping; Wang, Li-Rong; Zhang, Ling; Lin, Xue-Chun E-mail: yangyy@semi.ac.cn

    2015-03-14

    A highly efficient nano-periodical grating is theoretically investigated for spectral beam combining (SBC) and is experimentally implemented for attaining high-brightness laser from a diode laser array. The rigorous coupled-wave analysis with the S matrix method is employed to optimize the parameters of the grating. According the optimized parameters, the grating is fabricated and plays a key role in SBC cavity. The diffraction efficiency of this grating is optimized to 95% for the output laser which is emitted from the diode laser array. The beam parameter product of 3.8 mm mrad of the diode laser array after SBC is achieved at the output power of 46.3 W. The optical-to-optical efficiency of SBC cavity is measured to be 93.5% at the maximum operating current in the experiment.

  20. VCM-OFDM technique for advanced space communications system with high spectral efficiency

    NASA Astrophysics Data System (ADS)

    Li, Jionghui; Zhou, Qing; Xiong, Weiming; Zhang, Ying; Yao, Chen

    2016-11-01

    The development of precise scientific payloads brings higher demand on the efficiency of space communications system to transmit the increasing volume of scientific data. Aiming to this issue, Orthogonal Frequency Division Multiplexing (OFDM) is chosen for its inherent capability of high-rate data transmission. Further, considering the dynamic link condition due to satellite orbital motion, we propose a new technique which combines Variable Coding Modulation (VCM) with OFDM to enhance the communication link spectral efficiency with required transmission reliability. With VCM-OFDM technique, the channel coding and modulation mode can be variable with time according to the link conditions, in order to fit the link budget curve and maintain a relatively fixed link margin. Hence, link resource waste can be reduced and throughput can be remarkably improved. Considering that OFDM-based systems are sensitive to Doppler shifts/spread, the coding and modulation mode (CODMOD) selection should be optimized subject to this scenario. This paper introduces the architecture of near-earth space data transmission system based on VCM-OFDM technique. The Doppler influence is analyzed through simulation and the CODMOD selection algorithm is discussed. The results prove the high performance on spectral efficiency enhancement of VCM-OFDM by comparison with several existing alternative methods.

  1. Spectrally-efficient all-optical OFDM by WSS and AWG.

    PubMed

    Hoxha, J; Morosi, J; Shimizu, S; Martelli, P; Boffi, P; Wada, N; Cincotti, G

    2015-05-01

    We report on the transmission experiment of seven 12.5-GHz spaced all optical-orthogonal frequency division multiplexed (AO-OFDM) subcarriers over a 35-km fiber link, using differential quadrature phase shift keying (DQPSK) modulation and direct detection. The system does not require chromatic dispersion compensation, optical time gating at the receiver (RX) or cyclic prefix (CP), achieving the maximum spectral efficiency. We use a wavelength selective switch (WSS) at the transmitter (TX) to allow subcarrier assignment flexibility and optimal filter shaping; an arrayed waveguide grating (AWG) AO-OFDM demultiplexer is used at the RX, to reduce the system cost and complexity. PMID:25969193

  2. Optimizing indoor illumination quality and energy efficiency using a spectrally tunable lighting system to augment natural daylight.

    PubMed

    Hertog, W; Llenas, A; Carreras, J

    2015-11-30

    This article demonstrates the benefits of complementing a daylight-lit environment with a spectrally tunable illumination system. The spectral components of daylight present in the room are measured by a low-cost miniature spectrophotometer and processed through a number of optimization algorithms, carefully trading color fidelity for energy efficiency. Spectrally-tunable luminaires provide only those wavelengths that ensure that either the final illumination spectrum inside the room is kept constant or carefully follows the dynamic spectral pattern of natural daylight. Analyzing the measured data proves that such a hybrid illumination system brings both unprecendented illumination quality and significant energy savings.

  3. Production efficiencies of U.S. electric generation plants: Effects of data aggregation and greenhouse gas and renewable energy policy

    NASA Astrophysics Data System (ADS)

    Lynes, Melissa Kate

    Over the last few decades there has been a shift in electricity production in the U.S. Renewable energy sources are becoming more widely used. In addition, electric generation plants that use coal inputs are more heavily regulated than a couple decades ago. This shift in electricity production was brought on by changes in federal policy -- a desire for electricity produced in the U.S. which led to policies being adopted that encourage the use of renewable energy. The change in production practices due to policies may have led to changes in the productivity of electric generation plants. Multiple studies have examined the most efficient electric generation plants using the data envelopment analysis (DEA) approach. This study builds on past research to answer three questions: 1) Does the level of aggregation of fuel input variables affect the plant efficiency scores and how does the efficiency of renewable energy input compare to nonrenewable energy inputs; 2) Are policies geared toward directly or indirectly reducing greenhouse gas emissions affecting the production efficiencies of greenhouse gas emitting electric generation plants; and 3) Do renewable energy policies and the use of intermittent energy sources (i.e. wind and solar) affect the productivity growth of electric generation plants. All three analysis, presented in three essays, use U.S. plant level data obtained from the Energy Information Administration to answer these questions. The first two essays use DEA to determine the pure technical, overall technical, and scale efficiencies of electric generation plants. The third essay uses DEA within the Malmquist index to assess the change in productivity over time. Results indicate that the level of aggregation does matter particularly for scale efficiency. This implies that valuable information is likely lost when fuel inputs are aggregated together. Policies directly focused on reducing greenhouse gas emissions may improve the production efficiencies of

  4. High efficiency structured EUV multilayer mirror for spectral filtering of long wavelengths.

    PubMed

    Huang, Qiushi; de Boer, Meint; Barreaux, Jonathan; van der Meer, Robert; Louis, Eric; Bijkerk, Fred

    2014-08-11

    High spectral purity at longer wavelength side is demanded in many extreme ultraviolet (EUV) and soft X-ray (together also referred to as XUV) optical systems. It is usually obtained at the expense of a high loss of XUV efficiency. We proposed and developed a new method based on a periodic, tapered structure integrated with an EUV multilayer. The longer wavelength radiation is scattered/diffracted away by the tapered multilayer structure while the EUV light is reflected. The first proof-of-principle showed a broadband suppression from λ = 100-400 nm with an average factor of 14. Moreover, a high EUV reflectance of 64.7% was achieved, which corresponds to 94% of the efficiency of a regular EUV multilayer mirror. PMID:25321021

  5. A highly sensitive and selective resonance scattering spectral assay for potassium ion based on aptamer and nanosilver aggregation reactions.

    PubMed

    Cai, Wei; Fan, Yanyan; Jiang, Zhiliang; Yao, Junen

    2010-06-15

    The 5nm nanosilver was prepared by the sodium borohydride procedure, using sodium citrate as a stabilizing reagent. The nanosilver particle was combined with the aptamer for K(+) to form aptamer-nanosilver complex that was stabile in pH 7.0 Na(2)HPO(4)-NaH(2)PO(4) buffer solutions and in the presence of high concentration of NaCl. In 85 degrees C water bath, K(+) interacted with the aptamer to form very stable G-quadruplex that cannot stabilize the nanosilver particle. The uncombined nanosilver particles are aggregated to big particles in high concentration of NaCl, that led to the resonance scattering (RS) intensity at 470nm increased greatly. Under the selected conditions, the increased RS intensity (DeltaI) is linear to K(+) concentration in the range of 0.060-3350micromol/L, with a regression equation of DeltaI=0.177C+0.55, a correlation coefficient of 0.9964, and a detection limit of 0.006micromol/L K(+). The aptamer-nanosilver RS assay has been applied to determination of K(+) in serum and rain water, with satisfactory results.

  6. Urchin-aggregation inspired closely-packed hierarchical ZnO nanostructures for efficient light scattering.

    PubMed

    Ko, Yeong Hwan; Yu, Jae Su

    2011-12-19

    We reported the enhancement of light scattering in the urchin-aggregation shaped closely-packed hierarchical ZnO nanostructures, fabricated by a simple and scalable process based on the hydrothermal method utilizing the silica microspheres monolayer as a two-dimensional periodic template. From theoretical predictions, the diffuse light scattering is closely related to the size of silica microspheres as light diffusion centers. Moreover, the ZnO nanorod arrays on silica microspheres monolayer provide the further enhancement of light scattering. The experimentally fabricated urchin-aggregation shaped ZnO nanostructures using silica microspheres of 970 nm indicated a high density of ZnO nanorods with a wide bending angle, which led to the largely increased photoluminescence intensity and a high transmittance haze ratio of > 70% in the wavelength range of 400-900 nm in keeping with a high total transmittance. The contact angles of a water droplet on the surface of the samples were also explored. PMID:22274182

  7. Effects of Spectral Error in Efficiency Measurements of GaInAs-Based Concentrator Solar Cells

    SciTech Connect

    Osterwald, C. R.; Wanlass, M. W.; Moriarty, T.; Steiner, M. A.; Emery, K. A.

    2014-03-01

    This technical report documents a particular error in efficiency measurements of triple-absorber concentrator solar cells caused by incorrect spectral irradiance -- specifically, one that occurs when the irradiance from unfiltered, pulsed xenon solar simulators into the GaInAs bottom subcell is too high. For cells designed so that the light-generated photocurrents in the three subcells are nearly equal, this condition can cause a large increase in the measured fill factor, which, in turn, causes a significant artificial increase in the efficiency. The error is readily apparent when the data under concentration are compared to measurements with correctly balanced photocurrents, and manifests itself as discontinuities in plots of fill factor and efficiency versus concentration ratio. In this work, we simulate the magnitudes and effects of this error with a device-level model of two concentrator cell designs, and demonstrate how a new Spectrolab, Inc., Model 460 Tunable-High Intensity Pulsed Solar Simulator (T-HIPSS) can mitigate the error.

  8. Broad spectral sensitivity and improved efficiency in CuPc/Sub-Pc organic photovoltaic devices

    NASA Astrophysics Data System (ADS)

    Kumar, Hemant; Kumar, Pankaj; Bhardwaj, Ramil; Sharma, G. D.; Chand, Suresh; Jain, S. C.; Kumar, Vikram

    2009-01-01

    We demonstrate organic photovoltaic devices incorporating two donors, namely, copper phthalocyanine (CuPc) and boron sub-phthalocyanine chloride (Sub-Pc) in association with single acceptor fullerene (C60) with sensitivity extending across the visible solar spectrum. It has been found that the absorption in different spectral regions in CuPc and Sub-Pc results in efficient harvesting of incident light photons which leads to enhanced power conversion efficiency (η). An enhancement in η from 0.64%, in the device architecture indium-tin-oxide (ITO)/CuPc(20 nm)/C60(40 nm)/bathophenanthroline (BPhen) (8 nm)/Al(150 nm), to ~1.3% in the optimized device having a 2 nm layer of Sub-Pc in the geometry ITO/CuPc(18 nm)/Sub-Pc(2 nm)/C60 (40 nm)/BPhen (8 nm)/Al(150 nm) has been observed. This enhancement in η is dominantly attributed to the increment in short circuit current density (Jsc) due to efficient photon harvesting by incorporation of dual donors.

  9. Photodesorption of H2O molecules from a glass surface and spectral distribution of its efficiency

    NASA Astrophysics Data System (ADS)

    Tagirov, R. B.; Iskhakova, É. Kh.

    1981-03-01

    An experimental arrangement based on an elliptical illuminator has been developed to determine the efficiency of desorption of H2O molecules from a glass surface. The target is the inner surface of a glass tube welded to a PMI-2 manometric converter. The necessary range of the radiation pulse from an IFP-2000 lamp is separated by a pile of filters from a large collection of colored glass. The energy in a pulse is measured by an evacuated calorimetric detector of cylindrical shape that reproduces the irradiated surface. We have plotted the spectral curve of the efficiency, taking as i0 the total light flux that penetrates the surface of the glass target. It was found that the red limit of photodesorption of molecules from the surface of glass of the molybdenum group is situated at 470±25 nm, and the absolute maximal value of the efficiency at λ=330 nm reaches 2·10-4 mol./photon. The desorption of the molecules is deduced to be essentially photoelectronic in nature.

  10. Spectral characteristics of nonchain HF and DF electric-discharge lasers in efficient excitation modes

    SciTech Connect

    Panchenko, Aleksei N; Orlovsky, V M; Tarasenko, Viktor F

    2004-04-30

    The spectral characteristics of efficient nonchain HF and DF chemical lasers are studied. It is found that the emission spectra of nonchain lasers operating with high efficiency are strongly broadened. Almost 30 emission lines of an HF laser and cascade lasing on the v(3-2) {yields} v(2-1) {yields} v(1-0) vibrational transitions of HF molecules for a number of rotational lines are obtained. It is shown that the development of discharge inhomogeneities significantly reduces the number of lasing lines in the spectra of nonchain chemical lasers. For an SF{sub 6} - D{sub 2} mixture excited by a generator with an inductive storage, about 40 lasing lines are observed on four vibrational transitions of DF molecules and the v(4-3) {yields} v(3-2) {yields} v(2-1) {yields} v(1-0) cascade lasing is obtained at several rotational lines. Nonchain HF and DF electric-discharge lasers with a total and intrinsic efficiency of up to 6% and 10%, respectively, pumped from capacitive and inductive generators are developed. (lasers)

  11. A Fourier rebinning algorithm incorporating spectral transfer efficiency for 3D PET.

    PubMed

    Tanaka, E; Amo, Y

    1998-04-01

    This paper presents a Fourier rebinning algorithm for three-dimensional image reconstruction in PET that incorporates the concept of spectral transfer function. It suggests the need for discarding low-frequency components in the rebinning. It also includes the correction for rebinning efficiency which was evaluated by simulations as a function of oblique angle of projections. The performance was optimized by high-pass filters and axial smoothing. The algorithm yields satisfactory images with negligible axial cross-talk for a maximum oblique angle up to 26.6 degrees. The statistical noise was evaluated in terms of 'noise equivalent number of oblique angles', and reasonable results were obtained in view of the theoretical expectation. Ring artefacts due to noise are negligibly small.

  12. Construction of filter vectors for the information-efficient spectral imaging sensor

    SciTech Connect

    Stallard, B.R.; Gentry, S.M.

    1998-12-01

    The information-efficient spectral imaging sensor (ISIS) seeks to improve system performance by processing hyperspectral information in the optical hardware. Its output may be a gray scale image in which one attempts to maximize the contrast between a given target and the background. Alternatively, its output may be a small number of images, rather than a full data cube, that retain the essential information required in the application. The principal advantage of ISIS is that it offers the discrimination of hyperspectral imaging while achieving the signal-to-noise ratio of multispectral imaging. The paper focuses on construction of the filter vectors that are needed to program ISIS. The instrument produces an image which is essentially a dot product of the scene and the filter vector. Both single vector and multiple vector approaches are considered. Also, they discuss some subtle points related to optimizing the filter vectors.

  13. Nonlinear optical signal processing for high-speed, spectrally efficient fiber optic systems and networks

    NASA Astrophysics Data System (ADS)

    Zhang, Bo

    The past decade has witnessed astounding boom in telecommunication network traffic. With the emergence of multimedia over Internet, the high-capacity optical transport systems have started to shift focus from the core network towards the end users. This trend leads to diverse optical networks with transparency and reconfigurability requirement. As single channel data rate continues to increase and channel spacing continues to shrink for high capacity, high spectral efficiency, the workload on conventional electronic signal processing elements in the router nodes continues to build up. Performing signal processing functions in the optical domain can potentially alleviate the speed bottleneck if the unique optical properties are efficiently leveraged to assist electronic processing methodologies. Ultra-high bandwidth capability along with the promise for multi-channel and format-transparent operation make optical signal processing an attractive technology which is expected to have great impact on future optical networks. For optical signal processing applications in fiber-optic network and systems, a laudable goal would be to explore the unique nonlinear optical processes in novel photonic devices. This dissertation investigates novel optical signal processing techniques through simulations and experimental demonstrations, analyzes limitations of these nonlinear processing elements and proposes techniques to enhance the system performance or designs for functional photonic modules. Two key signal-processing building blocks for future optical networks, namely slow-light-based tunable optical delay lines and SOA-based high-speed wavelength converters, are presented in the first part of the dissertation. Phase preserving and spectrally efficient slow light are experimentally demonstrated using advanced modulation formats. Functional and novel photonic modules, such as multi-channel synchronizer and variable-bit-rate optical time division multiplexer are designed and

  14. One bit/s/Hz Spectrally Efficient Transmission for an Eight-Channel NRZ-Modulated DWDM System

    NASA Astrophysics Data System (ADS)

    Vij, Robin; Sharma, Neeraj

    2016-03-01

    The core of the global telecommunication network consists of wavelength-division multiplexed (WDM) optical transmission systems. WDM is the technology of choice as it allows for a high spectral efficiency. We propose an effective way to counter the nonlinearities like four-wave mixing and cross-phase modulation to achieve the spectral efficiency of 1 bit/s/Hz using non-return-to-zero (NRZ) modulation format. We use the concept of non-uniform channel spacing and non-uniform power assignment between adjacent channels of the WDM system. We have simulated an eight-channel WDM lightwave system with bit rates of 10 and 25 Gbit/s.

  15. A spectral correlation function for efficient sequential NMR assignments of uniformly (15)N-labeled proteins.

    PubMed

    Bartels, C; Wüthrich, K

    1994-11-01

    A new computer-based approach is described for efficient sequence-specific assignment of uniformly (15)N-labeled proteins. For this purpose three-dimensional (15)N-correlated [(1)H, (1)H]-NOESY spectra are divided up into two-dimensional (1)H-(1)H strips which extend over the entire spectral width along one dimension and have a width of ca. 100 Hz, centered about the amide proton chemical shifts along the other dimension. A spectral correlation function enables sorting of these strips according to proximity of the corresponding residues in the amino acid sequence. Thereby, starting from a given strip in the spectrum, the probability of its corresponding to the C-terminal neighboring residue is calculated for all other strips from the similarity of their peak patterns with a pattern predicted for the sequentially adjoining residue, as manifested in the scalar product of the vectors representing the predicted and measured peak patterns. Tests with five different proteins containing both α-helices and β-sheets, and ranging in size from 58 to 165 amino acid residues show that the discrimination achieved between the sequentially neighboring residue and all other residues compares well with that obtained with an unguided interactive search of pairs of sequentially neighboring strips, with important savings in the time needed for complete analysis of 3D (15)N-correlated [(1)H, (1)H]-NOESY spectra. The integration of this routine into the program package XEASY ensures that remaining ambiguities can be resolved by visual inspection of the strips, combined with reference to the amino acid sequence and information on spin-system types obtained from additional NMR spectra.

  16. Highly Efficient Far Red/Near-Infrared Solid Fluorophores: Aggregation-Induced Emission, Intramolecular Charge Transfer, Twisted Molecular Conformation, and Bioimaging Applications.

    PubMed

    Lu, Hongguang; Zheng, Yadan; Zhao, Xiaowei; Wang, Lijuan; Ma, Suqian; Han, Xiongqi; Xu, Bin; Tian, Wenjing; Gao, Hui

    2016-01-01

    The development of organic fluorophores with efficient solid-state emissions or aggregated-state emissions in the red to near-infrared region is still challenging. Reported herein are fluorophores having aggregation-induced emission ranging from the orange to far red/near-infrared (FR/NIR) region. The bioimaging performance of the designed fluorophore is shown to have potential as FR/NIR fluorescent probes for biological applications. PMID:26576818

  17. 16 W output power by high-efficient spectral beam combining of DBR-tapered diode lasers.

    PubMed

    Müller, André; Vijayakumar, Deepak; Jensen, Ole Bjarlin; Hasler, Karl-Heinz; Sumpf, Bernd; Erbert, Götz; Andersen, Peter E; Petersen, Paul Michael

    2011-01-17

    Up to 16 W output power has been obtained using spectral beam combining of two 1063 nm DBR-tapered diode lasers. Using a reflecting volume Bragg grating, a combining efficiency as high as 93.7% is achieved, resulting in a single beam with high spatial coherence. The result represents the highest output power achieved by spectral beam combining of two single element tapered diode lasers. Since spectral beam combining does not affect beam propagation parameters, M2-values of 1.8 (fast axis) and 3.3 (slow axis) match the M2-values of the laser with lowest spatial coherence. The principle of spectral beam combining used in our experiments can be expanded to combine more than two tapered diode lasers and hence it is expected that the output power may be increased even further in the future.

  18. Spectrally efficient direct-detected OFDM transmission employing an iterative estimation and cancellation technique.

    PubMed

    Peng, Wei-Ren; Wu, Xiaoxia; Feng, Kai-Ming; Arbab, Vahid R; Shamee, Bishara; Yang, Jeng-Yuan; Christen, Louis C; Willner, Alan E; Chi, Sien

    2009-05-25

    We demonstrate a linearly field-modulated, direct-detected virtual SSB-OFDM (VSSB-OFDM) transmission with an RF tone placed at the edge of the signal band. By employing the iterative estimation and cancellation technique for the signal-signal beat interference (SSBI) at the receiver, our approach alleviates the need of the frequency gap, which is typically reserved for isolating the SSBI, and saves half the electrical bandwidth, thus being very spectrally efficient. We derive the theoretical model for the VSSB-OFDM system and detail the signal processing for the iterative approach conducted at the receiver. Possible limitations for this iterative approach are also given and discussed. We successfully transmit a 10 Gbps, 4-quadrature-amplitude-modulation (QAM) VSSB-OFDM signal through 340 km of uncompensated standard single mode fiber (SSMF) with almost no penalty. In addition, the simulated results show that the proposed scheme has an approximately 2 dB optical-signal-to-noise-ratio (OSNR) gain and has a better chromatic dispersion (CD) tolerance compared with the previous intensity-modulated SSB-OFDM system.

  19. Eliminating Electricity Deficit through Energy Efficiency in India: An Evaluation of Aggregate Economic and Carbon Benefits

    SciTech Connect

    Sathaye, Jayant; Gupta, Arjun

    2010-04-30

    Electricity demand has consistently exceeded available supply in India. While the electricity deficit varies across states, nationally it was estimated to be of the order of 12percent on peak and 11percent for electricity during 2008-09. This paper explores a demand-side focused potential for energy efficiency improvement to eliminate the electricity deficit compared to a business as usual (BAU) supply-side focused scenario. The limited availability of finance and other legal and administrative barriers have constrained the construction of new power plant capacity in India. As a result, under the BAU scenario, India continues to face an electricity deficit beyond the end of the Twelfth Five Year Plan. The demand-side cost-effective potential achieved through replacement of new electricity-using products, however, is large enough to eliminate the deficit as early as 2013 and subsequently reduce the future construction of power plants and thus reduce air pollutant emissions. Moreover, energy efficiency improvements cost a fraction of the cost for new supply and can lead to a substantial increase in India's economic output or gross domestic product (GDP). Eliminating the deficit permits businesses that have experienced electricity cutbacks to restore production. We estimate the size of the cumulative production increase in terms of the contribution to GDP at a $505 billion between 2009 and 2017, the end of India's Twelfth Five Year Plan, which may be compared with India's 2007-08 GDP of $911 billion. The economic output is influenced by the size of the electricity savings and rate of penetration of energy efficient technologies, and that of self-generation equipment and inverters used by businesses faced with electricity cuts. Generation and inverters are estimated to service 23percent of these customers in 2009, which increase to 48percent by 2020. The reduction in the construction and operation of new power plants reduces the cumulative CO2 emissions by 65 Mt, and

  20. Spectrally resolved efficiencies of carbon monoxide (CO) photoproduction in the western Canadian Arctic: particles versus solutes

    NASA Astrophysics Data System (ADS)

    Song, G.; Xie, H.; Bélanger, S.; Leymarie, E.; Babin, M.

    2013-06-01

    Spectrally resolved efficiency (i.e. apparent quantum yield, AQY) of carbon monoxide (CO) photoproduction is a useful indicator of substrate photoreactivity and a crucial parameter for modeling CO photoproduction rates in the water column. Recent evidence has suggested that CO photoproduction from particles in marine waters is significant compared to the well-known CO production from chromophoric dissolved organic matter (CDOM) photodegradation. Although CDOM-based CO AQY spectra have been extensively determined, little is known of this information on the particulate phase. Using water samples collected from the Mackenzie estuary, shelf, and Canada Basin in the southeastern Beaufort Sea, the present study for the first time quantified the AQY spectra of particle-based CO photoproduction and compared them with the concomitantly determined CDOM-based CO AQY spectra. CO AQYs of both particles and CDOM decreased with wavelength but the spectral shape of the particulate AQY was flatter in the visible regime. This feature resulted in a disproportionally higher visible light-driven CO production by particles, thereby increasing the ratio of particle- to CDOM-based CO photoproduction with depth in the euphotic zone. In terms of depth-integrated production in the euphotic zone, CO formation from CDOM was dominated by the ultraviolet (UV, 290-400 nm) radiation whereas UV and visible light played roughly equal roles in CO production from particles. Spatially, CO AQY of bulk particulate matter (i.e. the sum of organics and inorganics) augmented from the estuary and shelf to the basin while CO AQY of CDOM trended inversely. Water from the deep chlorophyll maximum layer revealed higher CO AQYs than did surface water for both particles and CDOM. CO AQY of bulk particulate matter exceeded that of CDOM on the shelf and in the basin, but the sequence reversed in the estuary. Without consideration of the potential role of metal oxides (e.g. iron oxides) in particle photochemistry

  1. Spectrally resolved efficiencies of carbon monoxide (CO) photoproduction in the Western Canadian Arctic: particles versus solutes

    NASA Astrophysics Data System (ADS)

    Song, G.; Xie, H.; Bélanger, S.; Babin, M.

    2012-11-01

    Spectrally resolved efficiency (i.e. apparent quantum yield, AQY) of carbon monoxide (CO) photoproduction is a useful indicator of substrate photoreactivity and a crucial parameter for modeling CO photoproduction rates in the water column. Recent evidence has suggested that CO photoproduction from particles in marine waters is significant compared to the well-known CO production from chromophoric dissolved organic matter (CDOM) photodegradation. Although CDOM-based CO AQY spectra have been extensively determined, little is known of this information on the particulate phase. Using water samples collected from the Mackenzie estuary, shelf, and Canada Basin in the Southeastern Beaufort Sea, the present study for the first time quantified the AQY spectra of particle-based CO photoproduction and compared them with the concomitantly determined CDOM-based CO AQY spectra. CO AQYs of both particles and CDOM decreased with wavelength but the spectral shape of the particulate AQY was flatter in the visible regime. This feature resulted in a disproportionally higher visible light-driven CO production by particles, thereby increasing the ratio of particle- to CDOM-based CO photoproduction with depth in the euphotic zone. In terms of depth-integrated production in the euphotic zone, CO formation from CDOM was dominated by the ultraviolet (UV, 290-400 nm) radiation whereas UV and visible light played roughly equal roles in CO production from particles. Spatially, CO AQY of bulk particulate matter (i.e. the sum of organics and inorganics) augmented from the estuary to shelf to basin while CO AQY of CDOM trended inversely. Water from the deep chlorophyll maximum layer revealed higher CO AQYs than did surface water for both particles and CDOM. CO AQY of bulk particulate matter exceeded that of CDOM on the shelf and in the basin but the sequence reversed in the estuary. Mineral absorption-corrected CO AQY of particulate organic matter (POM) was, however, greater than its CDOM

  2. Efficient aggregation of multiple classes of information in wireless sensor networks.

    PubMed

    Qiu, Xiaoling; Liu, Haiping; Li, Deshi; Yick, Jennifer; Ghosal, Dipak; Mukherjee, Biswanath

    2009-01-01

    Congestion in a Wireless Sensor Network (WSN) can lead to buffer overflow, resource waste and delay or loss of critical information from the sensors. In this paper, we propose the Priority-based Coverage-aware Congestion Control (PCC) algorithm which is distributed, priority-distinct, and fair. PCC provides higher priority to packets with event information in which the sink is more interested. PCC employs a queue scheduler that can selectively drop any packet in the queue. PCC gives fair chance to all sensors to send packets to the sink, irrespective of their specific locations, and therefore enhances the coverage fidelity of the WSN. Based on a detailed simulation analysis, we show that PCC can efficiently relieve congestion and significantly improve the system performance based on multiple metrics such as event throughput and coverage fidelity. We generalize PCC to address data collection in a WSN in which the sensor nodes have multiple sensing devices and can generate multiple types of information. We propose a Pricing System that can under congestion effectively collect different types of data generated by the sensor nodes according to values that are placed on different information by the sink. Simulation analysis show that our Pricing System can achieve higher event throughput for packets with higher priority and achieve fairness among different categories. Moreover, given a fixed system capacity, our proposed Pricing System can collect more information of the type valued by the sink.

  3. Efficient aggregation of multiple classes of information in wireless sensor networks.

    PubMed

    Qiu, Xiaoling; Liu, Haiping; Li, Deshi; Yick, Jennifer; Ghosal, Dipak; Mukherjee, Biswanath

    2009-01-01

    Congestion in a Wireless Sensor Network (WSN) can lead to buffer overflow, resource waste and delay or loss of critical information from the sensors. In this paper, we propose the Priority-based Coverage-aware Congestion Control (PCC) algorithm which is distributed, priority-distinct, and fair. PCC provides higher priority to packets with event information in which the sink is more interested. PCC employs a queue scheduler that can selectively drop any packet in the queue. PCC gives fair chance to all sensors to send packets to the sink, irrespective of their specific locations, and therefore enhances the coverage fidelity of the WSN. Based on a detailed simulation analysis, we show that PCC can efficiently relieve congestion and significantly improve the system performance based on multiple metrics such as event throughput and coverage fidelity. We generalize PCC to address data collection in a WSN in which the sensor nodes have multiple sensing devices and can generate multiple types of information. We propose a Pricing System that can under congestion effectively collect different types of data generated by the sensor nodes according to values that are placed on different information by the sink. Simulation analysis show that our Pricing System can achieve higher event throughput for packets with higher priority and achieve fairness among different categories. Moreover, given a fixed system capacity, our proposed Pricing System can collect more information of the type valued by the sink. PMID:22408495

  4. Identification of active ingredients in Wuzhuyu decoction improving migraine in mice by spectral efficiency association.

    PubMed

    Pan, Xueqiang; Wang, Manyuan; Wu, Yanchuan; Lu, Xuran; Shang, Yawen; Xu, Yongsong; Zhai, Yongsong; Li, Jing; Li, Zhaoxia; Gong, Muxin

    2015-07-01

    Wuzhuyu decoction is a traditional Chinese medicine used for the effective treatment of migraines, termed 'Jueyin headache', in China. However, there have been few investigations to clarify the composition of Wuzhuyu decoction for the treatment of migraines. In the present study, 10 types of Wuzhuyu decoction were analyzed by chromatograms. 5-hydroxytryptamine (5-HT)-depletion mouse models of migraine were prepared by subcutaneous injection of reserpine and placement of autologous blood clots in the cerebral cortex. The levels of 5-HT, noradrenaline (NE), dopamine (DA), nitric oxide (NO) and nitric oxide synthase (NOS) in the brain tissues and sera of the mice were determined. The ingredients and pharmacodynamic indices of the Wuzhuyu decoctions were analyzed using spectral efficiency association by partial least squares regression. The levels of 5-HT, NE and DA in the mouse brain tissues were reduced to 337.785 ± 84.504, 171.173 ± 65.172 and 242.075 ± 158.621 mg/g brain tissue, respectively. The level of NO in the brain tissues increased to 0.425 ± 0.184 µmol/g protein and the activities of NOS in the brain tissues and sera increased to 0.719 ± 0.477 U/mg and 50.688 ± 8.132 U/ml, respectively. Regarding the ingredients of the Wuzhuyu decoction, those with significant regression coefficients were ginsenoside-Rg1, Re, Rb1, rutaevine (Rv), limonin (Li), evodiamine (Ev), rutaecarpine (Ru) and substance X (awaiting identification). Rg1, Re, Rb1, Rv, Li, Ev, Ru and X in the Wuzhuyu decoction were observed to yield the pharmacological effects, whereas Rb1, Rv and Ev were important in index improvement.

  5. Efficient application of the spectrally integrated Voigt function to radiative transfer spectroscopy

    NASA Astrophysics Data System (ADS)

    Abrarov, Sanjar

    We present a new application of the spectrally integrated Voigt function (SIVF) to the radiative transfer spectroscopy that enables computation of the spectral radiance and radiance at reduced spectral resolution. Applying a technique based on the Fourier expansion of the exponential multiplier we obtain the series approximations providing high-accuracy and rapid SIVF computation. In contrast to traditional line-by-line (LBL) radiative transfer models, the proposed SIVF algorithm prevents underestimation in the absorption coefficients and, therefore, preserves the radiant energy. LBL sample computations utilizing SIVF algorithm show the advantages of the proposed methodology in terms of the accuracy and computational speed.

  6. In situ spectral measurements improve the efficiency of light use efficiency models to estimate gross primary productivity in Mediterranean cork oak woodland

    NASA Astrophysics Data System (ADS)

    Cerasoli, S.; Silva, J. M.; Carvalhais, N.; Correia, A.; Costa e Silva, F.; Pereira, J. S.

    2013-12-01

    The Light Use Efficiency (LUE) concept is usually applied to retrieve Gross Primary Productivity (GPP) estimates in models integrating spectral indexes, namely Normalized Difference Vegetation Index (NDVI) and Photochemical Reflectance Index (PRI), considered proxies of biophysical properties of vegetation. The integration of spectral measurements into LUE models can increase the robustness of GPP estimates by optimizing particular parameters of the model. NDVI and PRI are frequently obtained by broad band sensors on remote platforms at low spatial resolution (e.g. MODIS). In highly heterogeneous ecosystems such spectral information may not be representative of the dynamic response of the ecosystem to climate variables. In Mediterranean oak woodlands different plant functional types (PFT): trees canopy, shrubs and herbaceous layer, contribute to the overall Gross Primary Productivity (GPP). In situ spectral measurements can provide useful information on each PFT and its temporal variability. The objectives of this study were: i) to analyze the temporal variability of NDVI, PRI and others spectral indices for the three PFT, their response to climate variables and their relationship with biophysical properties of vegetation; ii) to optimize a LUE model integrating selected spectral indexes in which the contribution of each PFT to the overall GPP is estimated individually; iii) to compare the performance of disaggregated GPP estimates and lumped GPP estimates, evaluated against eddy covariance measurements. Ground measurements of vegetation reflectance were performed in a cork oak woodland located in Coruche, Portugal (39°8'N, 8°19'W) where carbon and water fluxes are continuously measured by eddy covariance. Between April 2011 and June 2013 reflectance measurements of the herbaceous layer, shrubs and trees canopy were acquired with a FieldSpec3 spectroradiometer (ASD Inc.) which provided data in the range of 350-2500nm. Measurements were repeated approximately on

  7. Biomedical applications of the information-efficient spectral imaging sensor (ISIS)

    NASA Astrophysics Data System (ADS)

    Gentry, Stephen M.; Levenson, Richard M.

    1999-04-01

    The ISIS approach to spectral imaging seeks to bridge the gap between tuned multispectral and fixed hyperspectral imaging sensor. By allowing the definition of completely general spectral filter functions, truly optimal measurement can be made for a given task. These optimal measurements significantly improve signal to noise ratio and speed, minimize data volume and data rate, while preserving classification accuracy. This paper investigates the application of the ISIS sensing approach in two sample biomedical applications: prostate and colon cancer screening. It is shown that is these applications, two to three optimal measurements are sufficient to capture the majority of classification information for critical samples constituents. In the prostate cancer example, the optimal measurements allow 8 percent relative improvement in classification accuracy of critical cell constituents over a red, green, blue (RGB) sensor. In the colon cancer example, use of optimal measurements boost the classification accuracy of critical cell constituents by 28 percent relative to the RGB sensor. In both cases, optimal measurements match the performance achieved by the entire hyperspectral data set. The paper concludes that an ISIS style spectral imager can acquire these optimal spectral images directly, allowing improved classification accuracy imager can acquire these optimal spectral images directly, allowing improved classification accuracy over an RGB sensor. Compared to a hyperspectral sensor, the ISIS approach can achieve similar classification accuracy using a significantly lower number of spectral samples, thus minimizing overall sample classification time and cost.

  8. Efficiency of using correlation function for estimation of probability of substance detection on the base of THz spectral dynamics

    NASA Astrophysics Data System (ADS)

    Trofimov, Vyacheslav A.; Peskov, Nikolay V.; Kirillov, Dmitry A.

    2012-10-01

    One of the problems arising in Time-Domain THz spectroscopy for the problem of security is the developing the criteria for assessment of probability for the detection and identification of the explosive and drugs. We analyze the efficiency of using the correlation function and another functional (more exactly, spectral norm) for this aim. These criteria are applied to spectral lines dynamics. For increasing the reliability of the assessment we subtract the averaged value of THz signal during time of analysis of the signal: it means deleting the constant from this part of the signal. Because of this, we can increase the contrast of assessment. We compare application of the Fourier-Gabor transform with unbounded (for example, Gaussian) window, which slides along the signal, for finding the spectral lines dynamics with application of the Fourier transform in short time interval (FTST), in which the Fourier transform is applied to parts of the signals, for the same aim. These methods are close each to other. Nevertheless, they differ by series of frequencies which they use. It is important for practice that the optimal window shape depends on chosen method for obtaining the spectral dynamics. The probability enhancements if we can find the train of pulses with different frequencies, which follow sequentially. We show that there is possibility to get pure spectral lines dynamics even under the condition of distorted spectrum of the substance response on the action of the THz pulse.

  9. Optical signal processing for enabling high-speed, highly spectrally efficient and high capacity optical systems

    NASA Astrophysics Data System (ADS)

    Fazal, Muhammad Irfan

    The unabated demand for more capacity due to the ever-increasing internet traffic dictates that the boundaries of the state of the art maybe pushed to send more data through the network. Traditionally, this need has been satisfied by multiple wavelengths (wavelength division multiplexing), higher order modulation formats and coherent communication (either individually or combined together). WDM has the ability to reduce cost by using multiple channels within the same physical fiber, and with EDFA amplifiers, the need for O-E-O regenerators is eliminated. Moreover the availability of multiple colors allows for wavelength-based routing and network planning. Higher order modulation formats increases the capacity of the link by their ability to encode data in both the phase and amplitude of light, thereby increasing the bits/sec/Hz as compared to simple on-off keyed format. Coherent communications has also emerged as a primary means of transmitting and receiving optical data due to its support of formats that utilize both phase and amplitude to further increase the spectral efficiency of the optical channel, including quadrature amplitude modulation (QAM) and quadrature phase shift keying (QPSK). Polarization multiplexing of channels can double capacity by allowing two channels to share the same wavelength by propagating on orthogonal polarization axis and is easily supported in coherent systems where the polarization tracking can be performed in the digital domain. Furthermore, the forthcoming IEEE 100 Gbit/s Ethernet Standard, 802.3ba, provides greater bandwidth, higher data rates, and supports a mixture of modulation formats. In particular, Pol-MUX QPSK is increasingly becoming the industry's format of choice as the high spectral efficiency allows for 100 Gbit/s transmission while still occupying the current 50 GHz/channel allocation of current 10 Gbit/s OOK fiber systems. In this manner, 100 Gbit/s transfer speeds using current fiber links, amplifiers, and filters

  10. Experimental evidence that short-range intermolecular aggregation is sufficient for efficient charge transport in conjugated polymers

    PubMed Central

    Wang, Suhao; Fabiano, Simone; Himmelberger, Scott; Puzinas, Skomantas; Crispin, Xavier; Salleo, Alberto; Berggren, Magnus

    2015-01-01

    Efficiency, current throughput, and speed of electronic devices are to a great extent dictated by charge carrier mobility. The classic approach to impart high carrier mobility to polymeric semiconductors has often relied on the assumption that extensive order and crystallinity are needed. Recently, however, this assumption has been challenged, because high mobility has been reported for semiconducting polymers that exhibit a surprisingly low degree of order. Here, we show that semiconducting polymers can be confined into weakly ordered fibers within an inert polymer matrix without affecting their charge transport properties. In these conditions, the semiconducting polymer chains are inhibited from attaining long-range order in the π-stacking or alkyl-stacking directions, as demonstrated from the absence of significant X-ray diffraction intensity corresponding to these crystallographic directions, yet still remain extended along the backbone direction and aggregate on a local length scale. As a result, the polymer films maintain high mobility even at very low concentrations. Our findings provide a simple picture that clarifies the role of local order and connectivity of domains. PMID:26261305

  11. Dual-mode spectral convertors as a simple approach for the enhancement of hematite's solar water splitting efficiency

    NASA Astrophysics Data System (ADS)

    Atabaev, Timur Sh.; Vu, Hong Ha Thi; Ajmal, Muhammad; Kim, Hyung-Kook; Hwang, Yoon-Hwae

    2015-06-01

    Storing solar energy via a chemical fuel of hydrogen from water splitting represents a clean alternative for petroleum fuel. Thus, it is highly desirable for the production of hydrogen using environment-friendly and cost-effective methods. Most photoelectrodes used for this conversion are semiconductor materials whose band gaps match the UV and visible radiation of solar energy. However, further improvement in electrodes performance may be possible by improving photoabsorption efficiency in near-infrared region. This report represents our attempt to utilize IR photons for water splitting, and thus, spectral convertors were incorporated within the hematite nanorods (NRs) grown directly on a FTO glass. The results demonstrate that incorporation of spectral convertors within the hematite NRs leads to higher efficiency and performance in solar water splitting, because the convertors enable harvesting more photons both at UV and IR regions than conventional hematite.

  12. Nyquist-shaped dispersion-precompensated subcarrier modulation with direct detection for spectrally-efficient WDM transmission.

    PubMed

    Erkılınç, M S; Kilmurray, S; Maher, R; Paskov, M; Bouziane, R; Pachnicke, S; Griesser, H; Thomsen, B C; Bayvel, P; Killey, R I

    2014-04-21

    The use of single-sideband subcarrier modulation (SCM) with Nyquist (N) pulse shaping for cost-effective spectrally-efficient wavelength division multiplexed transmission with direct detection is described. Transmission of digitally pre-compensated 7 × 11 GHz-spaced QPSK SCM channels at 14 Gb/s per channel is experimentally demonstrated over distances of up to 800 km of uncompensated standard single-mode fiber (SSMF) (13440 ps/nm chromatic dispersion).

  13. Effects of inter- and intra-aggregate magnetic dipolar interactions on the magnetic heating efficiency of iron oxide nanoparticles.

    PubMed

    Ovejero, J G; Cabrera, D; Carrey, J; Valdivielso, T; Salas, G; Teran, F J

    2016-04-28

    Iron oxide nanoparticles have found an increasing number of biomedical applications as sensing or trapping platforms and therapeutic and/or diagnostic agents. Most of these applications are based on their magnetic properties, which may vary depending on the nanoparticle aggregation state and/or concentration. In this work, we assess the effect of the inter- and intra-aggregate magnetic dipolar interactions on the heat dissipation power and AC hysteresis loops upon increasing the nanoparticle concentration and the hydrodynamic aggregate size. We observe different effects produced by inter- (long distance) and intra-aggregate (short distance) interactions, resulting in magnetizing and demagnetizing effects, respectively. Consequently, the heat dissipation power under alternating magnetic fields strongly reflects such different interacting phenomena. The intra-aggregate interaction results were successfully modeled by numerical simulations. A better understanding of magnetic dipolar interactions is mandatory for achieving a reliable magnetic hyperthermia response when nanoparticles are located into biological matrices.

  14. Effects of inter- and intra-aggregate magnetic dipolar interactions on the magnetic heating efficiency of iron oxide nanoparticles.

    PubMed

    Ovejero, J G; Cabrera, D; Carrey, J; Valdivielso, T; Salas, G; Teran, F J

    2016-04-28

    Iron oxide nanoparticles have found an increasing number of biomedical applications as sensing or trapping platforms and therapeutic and/or diagnostic agents. Most of these applications are based on their magnetic properties, which may vary depending on the nanoparticle aggregation state and/or concentration. In this work, we assess the effect of the inter- and intra-aggregate magnetic dipolar interactions on the heat dissipation power and AC hysteresis loops upon increasing the nanoparticle concentration and the hydrodynamic aggregate size. We observe different effects produced by inter- (long distance) and intra-aggregate (short distance) interactions, resulting in magnetizing and demagnetizing effects, respectively. Consequently, the heat dissipation power under alternating magnetic fields strongly reflects such different interacting phenomena. The intra-aggregate interaction results were successfully modeled by numerical simulations. A better understanding of magnetic dipolar interactions is mandatory for achieving a reliable magnetic hyperthermia response when nanoparticles are located into biological matrices. PMID:27041536

  15. Efficient integration of spectral features for vehicle tracking utilizing an adaptive sensor

    NASA Astrophysics Data System (ADS)

    Uzkent, Burak; Hoffman, Matthew J.; Vodacek, Anthony

    2015-03-01

    Object tracking in urban environments is an important and challenging problem that is traditionally tackled using visible and near infrared wavelengths. By inserting extended data such as spectral features of the objects one can improve the reliability of the identification process. However, huge increase in data created by hyperspectral imaging is usually prohibitive. To overcome the complexity problem, we propose a persistent air-to-ground target tracking system inspired by a state-of-the-art, adaptive, multi-modal sensor. The adaptive sensor is capable of providing panchromatic images as well as the spectra of desired pixels. This addresses the data challenge of hyperspectral tracking by only recording spectral data as needed. Spectral likelihoods are integrated into a data association algorithm in a Bayesian fashion to minimize the likelihood of misidentification. A framework for controlling spectral data collection is developed by incorporating motion segmentation information and prior information from a Gaussian Sum filter (GSF) movement predictions from a multi-model forecasting set. An intersection mask of the surveillance area is extracted from OpenStreetMap source and incorporated into the tracking algorithm to perform online refinement of multiple model set. The proposed system is tested using challenging and realistic scenarios generated in an adverse environment.

  16. Dry-heating makes hen egg white lysozyme an efficient foaming agent and enables its bulk aggregation.

    PubMed

    Desfougères, Yann; Lechevalier, Valérie; Pezennec, Stéphane; Artzner, Franck; Nau, Françoise

    2008-07-01

    Dry-heating is considered to be one of the most promising approaches to improving the functionality of food proteins. It has been shown that even if only minor structural modifications occur during dry-heating, the foaming properties of proteins are highly improved. With the recent results obtained in the field of foam stabilization by nanoparticles or protein aggregates in mind, a study was undertaken on the impact of dry-heating of lysozyme, used as a model protein, on its foaming properties. This work highlighted the fact that dry-heated hen egg white lysozyme simultaneously exhibited enhanced foaming properties and aggregation capacity. Although the conditions that favored bulk aggregation (high ionic strength, pH, treatment duration, and protein concentration) also favored foaming properties, the large bulk aggregates were not essential to obtain the best functionality. It is envisaged that heat-treated lysozyme may self-associate at the air/water interface, stabilizing air bubbles.

  17. Advection and the Efficiency of Spectral Energy Transfer in Two-Dimensional Turbulence.

    PubMed

    Fang, Lei; Ouellette, Nicholas T

    2016-09-01

    We report measurements of the geometric alignment of the small-scale turbulent stress and the large-scale rate of strain that together lead to the net flux of energy from small scales to large scales in two-dimensional turbulence. We find that the instantaneous alignment between these two tensors is weak and, thus, that the spectral transport of energy is inefficient. We show, however, that the strain rate is much better aligned with the stress at times in the past, suggesting that the differential advection of the two is responsible for the inefficient spectral transfer. We provide evidence for this conjecture by measuring the alignment statistics conditioned on weakly changing stress history. Our results give new insight into the relationship between scale-to-scale energy transfer, geometric alignment, and advection in turbulent flows.

  18. Advection and the Efficiency of Spectral Energy Transfer in Two-Dimensional Turbulence

    NASA Astrophysics Data System (ADS)

    Fang, Lei; Ouellette, Nicholas T.

    2016-09-01

    We report measurements of the geometric alignment of the small-scale turbulent stress and the large-scale rate of strain that together lead to the net flux of energy from small scales to large scales in two-dimensional turbulence. We find that the instantaneous alignment between these two tensors is weak and, thus, that the spectral transport of energy is inefficient. We show, however, that the strain rate is much better aligned with the stress at times in the past, suggesting that the differential advection of the two is responsible for the inefficient spectral transfer. We provide evidence for this conjecture by measuring the alignment statistics conditioned on weakly changing stress history. Our results give new insight into the relationship between scale-to-scale energy transfer, geometric alignment, and advection in turbulent flows.

  19. Advection and the Efficiency of Spectral Energy Transfer in Two-Dimensional Turbulence.

    PubMed

    Fang, Lei; Ouellette, Nicholas T

    2016-09-01

    We report measurements of the geometric alignment of the small-scale turbulent stress and the large-scale rate of strain that together lead to the net flux of energy from small scales to large scales in two-dimensional turbulence. We find that the instantaneous alignment between these two tensors is weak and, thus, that the spectral transport of energy is inefficient. We show, however, that the strain rate is much better aligned with the stress at times in the past, suggesting that the differential advection of the two is responsible for the inefficient spectral transfer. We provide evidence for this conjecture by measuring the alignment statistics conditioned on weakly changing stress history. Our results give new insight into the relationship between scale-to-scale energy transfer, geometric alignment, and advection in turbulent flows. PMID:27636478

  20. Spatial-spectral flexible optical networking: enabling switching solutions for a simplified and efficient SDM network platform

    NASA Astrophysics Data System (ADS)

    Tomkos, I.; Zakynthinos, P.; Klonidis, D.; Marom, D.; Sygletos, S.; Ellis, A.; Salvadori, E.; Siracusa, D.; Angelou, M.; Papastergiou, G.; Psaila, N.; Ferran, J. F.; Ben-Ezra, S.; Jimenez, F.; Fernández-Palacios, J. P.

    2013-12-01

    The traffic carried by core optical networks grows at a steady but remarkable pace of 30-40% year-over-year. Optical transmissions and networking advancements continue to satisfy the traffic requirements by delivering the content over the network infrastructure in a cost and energy efficient manner. Such core optical networks serve the information traffic demands in a dynamic way, in response to requirements for shifting of traffics demands, both temporally (day/night) and spatially (business district/residential). However as we are approaching fundamental spectral efficiency limits of singlemode fibers, the scientific community is pursuing recently the development of an innovative, all-optical network architecture introducing the spatial degree of freedom when designing/operating future transport networks. Spacedivision- multiplexing through the use of bundled single mode fibers, and/or multi-core fibers and/or few-mode fibers can offer up to 100-fold capacity increase in future optical networks. The EU INSPACE project is working on the development of a complete spatial-spectral flexible optical networking solution, offering the network ultra-high capacity, flexibility and energy efficiency required to meet the challenges of delivering exponentially growing traffic demands in the internet over the next twenty years. In this paper we will present the motivation and main research activities of the INSPACE consortium towards the realization of the overall project solution.

  1. Spectrally efficient terabit optical transmission with Nyquist 64-QAM half-cycle subcarrier modulation and direct detection.

    PubMed

    Zou, Kaiheng; Zhu, Yixiao; Zhang, Fan; Chen, Zhangyuan

    2016-06-15

    We demonstrate 1.728  Tb/s(16×108  Gb/s) direct-detection wavelength division multiplexing (WDM) transmission over 80 km standard single mode fiber (SSMF) with Nyquist 64-ary quadrature amplitude modulation (64-QAM) and half-cycle subcarrier modulation. Each channel carries single sideband 18 GBaud 64-QAM signal and the channel spacing is 27 GHz. Considering 20% soft-decision forward error correction and frame redundancy, a net spectral efficiency record of 3.25 b/s/Hz is achieved for 100 G single polarization direct-detection WDM transmission.

  2. Efficient spectral hole-burning and atomic frequency comb storage in Nd3+:YLiF4

    PubMed Central

    Zhou, Zong-Quan; Wang, Jian; Li, Chuan-Feng; Guo, Guang-Can

    2013-01-01

    We present spectral hole-burning measurements of the 4I9/2 → 4F3/2 transition in Nd3+:YLiF4. The isotope shifts of Nd3+ can be directly resolved in the optical absorption spectrum. We report atomic frequency comb storage with an echo efficiency of up to 35% and a memory bandwidth of 60 MHz in this material. The interesting properties show the potential of this material for use in both quantum and classical information processing. PMID:24067549

  3. Growth, spectral and thermal studies of an efficient NLO material: Diaquadicinnamatocadmium(II)

    SciTech Connect

    Roy, Sunalya M.; Sudarsanakumar, M. R.; Dhanya, V. S.

    2014-01-28

    A nonlinear metal–organic crystal, diaquadicinnamatocadmium(II) has been grown by controlled gel diffusion technique. Sodium metasilicate was used to prepare the gel. The chemical composition of the crystal has been determined by CHN analysis. Powder X-ray diffraction studies confirm the crystalline nature of the grown crystal. Functional groups present in the compound were identified by FT-IR spectral analysis. The thermal decomposition of the compound was studied using thermogravimetry (TG). The optical transparency range and the lower cut-off wavelength were identified from the UV-Visible-NIR spectrum. The NLO activity of the grown crystal was confirmed using Kurtz and Perry powder test.

  4. Light absorption efficiencies of photosynthetic pigments: the dependence on spectral types of central stars

    NASA Astrophysics Data System (ADS)

    Komatsu, Yu; Umemura, Masayuki; Shoji, Mitsuo; Kayanuma, Megumi; Yabana, Kazuhiro; Shiraishi, Kenji

    2015-07-01

    For detecting life from reflection spectra on extrasolar planets, trace of photosynthesis is one of the indicators. However, it is not yet clear what kind of radiation environments is acceptable for photosynthesis. Light absorption in photosystems on the Earth occurs using limited photosynthetic pigments such as chlorophylls (Chls) and bacteriochlorophylls (BChls). Efficiencies of light absorption for the pigments were evaluated by calculating the specific molecular absorption spectra at the high accuracy-quantum mechanical level. We used realistic stellar radiation spectra such as F, G, K and M-type stars to investigate the efficiencies. We found that the efficiencies are increased with the temperature of stars, from M to F star. Photosynthetic pigments have two types of absorption bands, the Q y and Soret. In higher temperature stars like F star, contributions from the Soret region of the pigments are dominant for the efficiency. On the other hand, in lower temperature stars like M stars, the Q y band is crucial. Therefore, differences on the absorption intensity and the wavelength between the Q y and Soret band are the most important to characterize the photosynthetic pigments. Among photosynthetic pigments, Chls tend to be efficient in higher temperature stars, while BChls are efficient for M stars. Blueward of the 4000 Å break, the efficiencies of BChls are smaller than Chls in the higher temperature stars.

  5. The efficiency of GaN/AlGaN p-n heterostructures in UV spectral range

    NASA Astrophysics Data System (ADS)

    Kurin, S. Yu; Usikov, A. S.; Papchenko, B. P.; Helava, H.; Makarov, Yu N.; Evseenkov, A. S.; Tarasov, S. A.; Solomonov, A. V.

    2016-08-01

    GaN/AlGaN p-n heterostructures emitting in UV spectral range obtained by HVPE approach were investigated. It was shown that the peak wavelength of UV LEDs was in the range of 360-380 nm with FWHM of 10-13 nm. At operating current of 20 mA, the active region temperature Tj was 43°C, the output optical power and efficiency - 1.14 mW and 1.46%, respectively. The model based on corpuscular Monte Carlo method for calculation of the light extraction index was presented. The simulation results allow us to propose the ways to increase the efficiency of UV LEDs: surface interfaces texturing, optimization of the design of heterostructures, and the use of lenses.

  6. Efficient spectral and pseudospectral algorithms for 3D simulations of whistler-mode waves in a plasma

    SciTech Connect

    Gumerov, Nail A.; Karavaev, Alexey V.; Surjalal Sharma, A.; Shao Xi; Papadopoulos, Konstantinos D.

    2011-04-01

    Efficient spectral and pseudospectral algorithms for simulation of linear and nonlinear 3D whistler waves in a cold electron plasma are developed. These algorithms are applied to the simulation of whistler waves generated by loop antennas and spheromak-like stationary waves of considerable amplitude. The algorithms are linearly stable and show good stability properties for computations of nonlinear waves over tens of thousands of time steps. Additional speedups by factors of 10-20 (comparing single core CPU and one GPU) are achieved by using graphics processors (GPUs), which enable efficient numerical simulation of the wave propagation on relatively high resolution meshes (tens of millions nodes) in personal computing environment. Comparisons of the numerical results with analytical solutions and experiments show good agreement. The limitations of the codes and the performance of the GPU computing are discussed.

  7. Design and experimental investigation of highly efficient resonance-domain diffraction gratings in the visible spectral region.

    PubMed

    Barlev, Omri; Golub, Michael A; Friesem, Asher A; Nathan, Menachem

    2012-12-01

    Surface-relief resonance-domain diffraction gratings with deep and dense grooves provide considerable changes in light propagation direction, wavefront curvature, and nearly 100% Bragg diffraction efficiency usually attributed only to volume optical holograms. In this paper, we present design, computer simulation, fabrication, and experimental results of binary resonance-domain diffraction gratings in the visible spectral region. Performance of imperfectly fabricated diffraction groove profiles was optimized by controlling the DC and the depth of the grooves. Indeed, more than 97% absolute Bragg diffraction efficiency was measured at the 635 nm wavelength with binary gratings having periods of 520 nm and groove depths of about 1000 nm, fabricated by direct electron-beam lithography and reactive ion etching.

  8. Spectral finite element based on an efficient layerwise theory for wave propagation analysis of composite and sandwich beams

    NASA Astrophysics Data System (ADS)

    Nanda, Namita; Kapuria, S.; Gopalakrishnan, S.

    2014-07-01

    In this paper, we present a spectral finite element model (SFEM) using an efficient and accurate layerwise (zigzag) theory, which is applicable for wave propagation analysis of highly inhomogeneous laminated composite and sandwich beams. The theory assumes a layerwise linear variation superimposed with a global third-order variation across the thickness for the axial displacement. The conditions of zero transverse shear stress at the top and bottom and its continuity at the layer interfaces are subsequently enforced to make the number of primary unknowns independent of the number of layers, thereby making the theory as efficient as the first-order shear deformation theory (FSDT). The spectral element developed is validated by comparing the present results with those available in the literature. A comparison of the natural frequencies of simply supported composite and sandwich beams obtained by the present spectral element with the exact two-dimensional elasticity and FSDT solutions reveals that the FSDT yields highly inaccurate results for the inhomogeneous sandwich beams and thick composite beams, whereas the present element based on the zigzag theory agrees very well with the exact elasticity solution for both thick and thin, composite and sandwich beams. A significant deviation in the dispersion relations obtained using the accurate zigzag theory and the FSDT is also observed for composite beams at high frequencies. It is shown that the pure shear rotation mode remains always evanescent, contrary to what has been reported earlier. The SFEM is subsequently used to study wavenumber dispersion, free vibration and wave propagation time history in soft-core sandwich beams with composite faces for the first time in the literature.

  9. Efficient snoring and breathing detection based on sub-band spectral statistics.

    PubMed

    Sun, Xiang; Kim, Jin Young; Won, Yonggwan; Kim, Jung-Ja; Kim, Kyung-Ah

    2015-01-01

    Snoring, a common symptom in the general population may indicate the presence of obstructive sleep apnea (OSA). In order to detect snoring events in sleep sound recordings, a novel method was proposed in this paper. The proposed method operates by analyzing the acoustic characteristics of the snoring sounds. Based on these acoustic properties, the feature vectors are obtained using the mean and standard deviation of the sub-band spectral energy. A support vector machine is then applied to perform the frame-based classification procedure. This method was demonstrated experimentally to be effective for snoring detection. The database for detection included full-night audio recordings from four individuals who acknowledged having snoring habits. The performance of the proposed method was evaluated by classifying different events (snoring, breathing and silence) from the sleep sound recordings and comparing the classification against ground truth. The proposed algorithm was able to achieve an accuracy of 99.61% for detecting snoring events, 99.16% for breathing, and 99.55% for silence. PMID:26406075

  10. Managing magnetic nanoparticle aggregation and cellular uptake: a precondition for efficient stem-cell differentiation and MRI tracking.

    PubMed

    Fayol, Delphine; Luciani, Nathalie; Lartigue, Lenaic; Gazeau, Florence; Wilhelm, Claire

    2013-02-01

    The labeling of stem cells with iron oxide nanoparticles is increasingly used to enable MRI cell tracking and magnetic cell manipulation, stimulating the fields of tissue engineering and cell therapy. However, the impact of magnetic labeling on stem-cell differentiation is still controversial. One compromising factor for successful differentiation may arise from early interactions of nanoparticles with cells during the labeling procedure. It is hypothesized that the lack of control over nanoparticle colloidal stability in biological media may lead to undesirable nanoparticle localization, overestimation of cellular uptake, misleading MRI cell tracking, and further impairment of differentiation. Herein a method is described for labeling mesenchymal stem cells (MSC), in which the physical state of citrate-coated nanoparticles (dispersed versus aggregated) can be kinetically tuned through electrostatic and magnetic triggers, as monitored by diffusion light scattering in the extracellular medium and by optical and electronic microscopy in cells. A set of statistical cell-by-cell measurements (flow cytometry, single-cell magnetophoresis, and high-resolution MRI cellular detection) is used to independently quantify the nanoparticle cell uptake and the effects of nanoparticle aggregation. Such aggregation confounds MRI cell detection as well as global iron quantification and has adverse effects on chondrogenetic differentiation. Magnetic labeling conditions with perfectly stable nanoparticles-suitable for obtaining differentiation-capable magnetic stem cells for use in cell therapy-are subsequently identified. PMID:23184893

  11. Red spectral shift and enhanced quantum efficiency in phonon-free photoluminescence from silicon nanocrystals.

    PubMed

    de Boer, W D A M; Timmerman, D; Dohnalová, K; Yassievich, I N; Zhang, H; Buma, W J; Gregorkiewicz, T

    2010-12-01

    Crystalline silicon is the most important semiconductor material in the electronics industry. However, silicon has poor optical properties because of its indirect bandgap, which prevents the efficient emission and absorption of light. The energy structure of silicon can be manipulated through quantum confinement effects, and the excitonic emission from silicon nanocrystals increases in intensity and shifts to shorter wavelengths (a blueshift) as the size of the nanocrystals is reduced. Here we report experimental evidence for a short-lived visible band in the photoluminescence spectrum of silicon nanocrystals that increases in intensity and shifts to longer wavelengths (a redshift) with smaller nanocrystal sizes. This higher intensity indicates an increased quantum efficiency, which for 2.5-nm-diameter nanocrystals is enhanced by three orders of magnitude compared to bulk silicon. We assign this band to the radiative recombination of non-equilibrium electron-hole pairs in a process that does not involve phonons.

  12. Efficiency enhancement in two-cell CIGS photovoltaic system with low-cost optical spectral splitter.

    PubMed

    Maragliano, Carlo; Apostoleris, Harry; Bronzoni, Matteo; Rampino, Stefano; Stefancich, Marco; Chiesa, Matteo

    2016-01-25

    Spectrum splitting represents a valid alternative to multi-junction solar cells for broadband light-to-electricity conversion. While this concept has existed for decades, its adoption at the industrial scale is still stifled by high manufacturing costs and inability to scale to large areas. Here we report the experimental validation of a novel design that could allow the widespread adoption of spectrum splitting as a low-cost approach to high efficiency photovoltaic conversion. Our system consists of a prismatic lens that can be manufactured using the same methods employed for conventional CPV optic production, and two inexpensive CuInGaSe(2) (CIGS) solar cells having different composition and, thus, band gaps. We demonstrate a large improvement in cell efficiency under the splitter and show how this can lead to substantial increases in system output at competitive cost using existing technologies. PMID:26832577

  13. High efficiency thermal to electric energy conversion using selective emitters and spectrally tuned solar cells

    NASA Technical Reports Server (NTRS)

    Chubb, Donald L.; Flood, Dennis J.; Lowe, Roland A.

    1992-01-01

    Thermophotovoltaic (TPV) systems are attractive possibilities for direct thermal-to-electric energy conversion, but have typically required the use of black body radiators operating at high temperatures. Recent advances in both the understanding and performance of solid rare-earth oxide selective emitters make possible the use of TPV at temperatures as low as 1500 K. Depending on the nature of parasitic losses, overall thermal-to-electric conversion efficiencies greater than 20 percent are feasible.

  14. Light trapping efficiency comparison of Si solar cell textures using spectral photoluminescence.

    PubMed

    Barugkin, Chog; Allen, Thomas; Chong, Teck K; White, Thomas P; Weber, Klaus J; Catchpole, Kylie R

    2015-04-01

    The band-to-band absorption enhancement due to various types of light trapping structures is studied experimentally with photoluminescence (PL) on monocrystalline silicon wafers. Four basic light trapping structures are examined: reactive ion etched texture (RIE), metal-assisted etched texture (MET), random pyramid texture (RAN) and plasmonic Ag nanoparticles with a diffusive reflector (Ag/DR). We also compare two novel combined structures of front side RIE/rear side RAN and front side RIE/rear side Ag/DR. The use of photoluminescence allows us to measure the absorption due to band-to-band transitions only, and excludes parasitic absorption from free carriers and other sources. The measured absorptance spectra are used to calculate the maximum generation current for each structure, and the light trapping efficiency is compared to a recently-proposed figure of merit. The results show that by combining RIE with RAN and Ag/DR, we can fabricate two structures with excellent light trapping efficiencies of 55% and 52% respectively, which is well above previously reported values for similar wafer thicknesses. A comparison of the measured band-band absorption and the EQE of back-contact silicon solar cells demonstrates that PL extracted absorption provides a very good indication of long wavelength performance for high efficiency silicon solar cells. PMID:25968804

  15. High spectral efficient W-band optical/wireless system employing single-sideband single-carrier modulation.

    PubMed

    Ho, Chun-Hung; Lin, Chun-Ting; Cheng, Yu-Hsuan; Huang, Hou-Tzu; Wei, Chia-Chien; Chi, Sien

    2014-02-24

    With broader available bandwidth, W-band wireless transmission has attracted a lot of interests for future Giga-bit communication. In this article, we experimentally demonstrate W-band radio-over-fiber (RoF) system employing single-sideband single-carrier (SSB-SC) modulation with lower peak-to-average-power ratio (PAPR) than orthogonal frequency division multiplex (OFDM). To overcome the inter-symbol interference (ISI) of the penalty from uneven frequency response and SSB-SC modulation, frequency domain equalizer (FDE) and decision feedback equalizer (DFE) are implemented. We discuss the maximum available bandwidth of different modulation formats between SSB-SC and OFDM signals at the BER below forward error correction (FEC) threshold (3.8 × 10(-3)). Up to 50-Gbps 32-QAM SSB-SC signals with spectral efficiency of 5 bit/s/Hz can be achieved. PMID:24663711

  16. Efficient frequency downconversion at the single photon level from the red spectral range to the telecommunications C-band.

    PubMed

    Zaske, Sebastian; Lenhard, Andreas; Becher, Christoph

    2011-06-20

    We report on single photon frequency downconversion from the red part of the spectrum (738 nm) to the telecommunications C-band. By mixing attenuated laser pulses with an average photon number per pulse < 1 with a strong continuous light field at 1403 nm in a periodically poled Zn:LiNbO3 ridge waveguide an internal conversion efficiency of ∼ 73% is achieved. We further investigate the noise properties of the process by measuring the output spectrum. Our results indicate that by narrow spectral filtering a quantum interface should be feasible which bridges the wavelength gap between quantum emitters like color centers in diamond emitting in the red part of the spectrum and low-loss fiber-optic telecommunications wavelengths.

  17. Time domain zero-padding based adaptive-PAM signal transmission with high spectral efficiency in IMDD optical communication system

    NASA Astrophysics Data System (ADS)

    Zhang, Fangliu; He, Jing; Deng, Rui; Cheng, Yun; Xiao, Minlei; Chen, Lin

    2016-08-01

    In this paper, an adaptive pulse amplitude modulation (APAM) scheme is proposed and experimentally demonstrated in the intensity-modulation and direct-detection (IMDD) optical communications system. In the proposed scheme, the channel is divided into two sub-channels, and different PAM mapping can be chosen for different sub-channel according to the fading conditions. In addition, the 20-km standard single mode fiber (SSMF) transmission of 24 Gbit/s 16/4-APAM signal with the spectral efficiency (SE) up to 6 bit/s/Hz is experimentally demonstrated. The experiment results show that the bit error rate (BER) of the 16/4-APAM signal can be achieved less than 2.4e-2.

  18. Towards photodetection with high efficiency and tunable spectral selectivity: graphene plasmonics for light trapping and absorption engineering.

    PubMed

    Zhang, Jianfa; Zhu, Zhihong; Liu, Wei; Yuan, Xiaodong; Qin, Shiqiao

    2015-08-28

    Plasmonics can be used to improve absorption in optoelectronic devices and has been intensively studied for solar cells and photodetectors. Graphene has recently emerged as a powerful plasmonic material. It shows significantly less loss compared to traditional plasmonic materials such as gold and silver and its plasmons can be tuned by changing the Fermi energy with chemical or electrical doping. Here we propose the use of graphene plasmonics for light trapping in optoelectronic devices and show that the excitation of localized plasmons in doped, nanostructured graphene can enhance optical absorption in its surrounding medium including both bulky and two-dimensional materials by tens of times, which may lead to a new generation of photodetectors with high efficiency and tunable spectral selectivity in the mid-infrared and THz ranges.

  19. Low band-gap conjugated polymers with strong interchain aggregation and very high hole mobility towards highly efficient thick-film polymer solar cells.

    PubMed

    Chen, Zhenhui; Cai, Ping; Chen, Junwu; Liu, Xuncheng; Zhang, Lianjie; Lan, Linfeng; Peng, Junbiao; Ma, Yuguang; Cao, Yong

    2014-04-23

    Absorption spectra of polymer FBT-Th4 (1,4) (M n = 46.4 Kg/mol, E g = 1.62 eV, and HOMO = -5.36 eV) indicate strong interchain aggregation ability. High hole mobilities up to 1.92 cm(2) (V s)(-1) are demonstrated in OFETs fabricated under mild conditions. Inverted solar cells with active layer thicknesses ranging from 100 to 440 nm display PCEs exceeding 6.5%, with the highest efficiency of 7.64% achieved with a 230 nm thick active layer.

  20. Measurement of zone plate efficiencies in the extreme ultraviolet and applications to radiation monitors for absolute spectral emission

    NASA Astrophysics Data System (ADS)

    Seely, John; Holland, Glenn; Bremer, James C.; Zukowski, Tim; Feser, Michael; Feng, Yan; Kjornrattanawanich, Benjawan; Goray, Leonid

    2006-08-01

    The diffraction efficiencies of a Fresnel zone plate (ZP), fabricated by Xradia Inc. using the electron-beam writing technique, were measured using polarized, monochromatic synchrotron radiation in the extreme ultraviolet wavelength range 3.4-22 nm. The ZP had 2 mm diameter, 3330 zones, 150 nm outer zone width, and a 1 mm central occulter. The ZP was supported by a 100 nm thick Si 3N 4 membrane. The diffraction patterns were recorded by CMOS imagers with phosphor coatings and with 5.2 μm or 48 μm pixels. The focused +n orders (n=1-4), the diverging -1 order, and the undiffracted 0 order were observed as functions of wavelength and off-axis tilt angle. Sub-pixel focusing of the +n orders was achieved. The measured efficiency in the +1 order was in the 5% to 30% range with the phase-shift enhanced efficiency occurring at 8.3 nm where the gold bars are partially transmitting. The +2 and higher order efficiencies were much lower than the +1 order efficiency. The efficiencies were constant when the zone plate was tilted by angles up to +/-1° from the incident radiation beam. This work indicates the feasibility and benefits of using zone plates to measure the absolute EUV spectral emissions from solar and laboratory sources: relatively high EUV efficiency in the focused +1 order, good out-of-band rejection resulting from the low higher-order efficiencies and the ZP focusing properties, insensitivity to (unfocused) visible light scattered by the ZP, flat response with off-axis angle, and insensitivity to the polarization of the radiation based on the ZP circular symmetry. EUV sensors with Fresnel zone plates potentially have many advantages over existing sensors intended to accurately measure absolute EUV emission levels, such as those implemented on the GOES N-P satellites that use transmission gratings which have off-axis sensitivity variations and poor out-of-band EUV and visible light rejection, and other solar and laboratory sensors using reflection gratings which

  1. Spectral turning bands for efficient Gaussian random fields generation on GPUs and accelerators

    NASA Astrophysics Data System (ADS)

    Hunger, L.; Cosenza, B.; Kimeswenger, S.; Fahringer, T.

    2015-11-01

    A random field (RF) is a set of correlated random variables associated with different spatial locations. RF generation algorithms are of crucial importance for many scientific areas, such as astrophysics, geostatistics, computer graphics, and many others. Current approaches commonly make use of 3D fast Fourier transform (FFT), which does not scale well for RF bigger than the available memory; they are also limited to regular rectilinear meshes. We introduce random field generation with the turning band method (RAFT), an RF generation algorithm based on the turning band method that is optimized for massively parallel hardware such as GPUs and accelerators. Our algorithm replaces the 3D FFT with a lower-order, one-dimensional FFT followed by a projection step and is further optimized with loop unrolling and blocking. RAFT can easily generate RF on non-regular (non-uniform) meshes and efficiently produce fields with mesh sizes bigger than the available device memory by using a streaming, out-of-core approach. Our algorithm generates RF with the correct statistical behavior and is tested on a variety of modern hardware, such as NVIDIA Tesla, AMD FirePro and Intel Phi. RAFT is faster than the traditional methods on regular meshes and has been successfully applied to two real case scenarios: planetary nebulae and cosmological simulations.

  2. Photonic RF vector signal generation with enhanced spectral efficiency using precoded double single-sideband modulation.

    PubMed

    Wang, Yuanquan; Chien, Hung-Chang; Guo, HaiChao; Yu, Jianjun; Chang, Gee-Kung; Chi, Nan

    2016-06-01

    In this study, a novel photonic vector signal at frequency (RF) bands generation scheme based on the beating of double single sidebands (SSBs) is proposed and experimentally demonstrated. The double SSBs carry separate constant- or multi-amplitude quadrature-amplitude-modulation vector signals are generated from a single I/Q modulator. By adopting phase and amplitude precoding, different constellations can be generated, such as 3-ary phase-shift keying (PSK), 4-PSK, 7-PSK, 8-PSK, and so on. In this work, 10-Gbaud 7-PSK vector signal generation at 20 GHz enabled by two precoded 4-PSK SSB signals via a single I/Q modulator is theoretically and experimentally investigated. Compared to a single-drive Mach-Zehnder modulator or conventional I/Q modulator-based photonic vector signal generation scheme, the spectrum efficiency can be doubled. Differential coding is also implemented at the transmitter side for accurate demodulation of 7-PSK into two 4-PSK signals. The bit-error ratio for 10-Gbaud 7-PSK vector signals can be under hard-decision forward-error-correction threshold of 3.8×10-3 after 10 km standard single-mode fiber transmission.

  3. An Efficient Spectral Method for Ordinary Differential Equations with Rational Function Coefficients

    NASA Technical Reports Server (NTRS)

    Coutsias, Evangelos A.; Torres, David; Hagstrom, Thomas

    1994-01-01

    We present some relations that allow the efficient approximate inversion of linear differential operators with rational function coefficients. We employ expansions in terms of a large class of orthogonal polynomial families, including all the classical orthogonal polynomials. These families obey a simple three-term recurrence relation for differentiation, which implies that on an appropriately restricted domain the differentiation operator has a unique banded inverse. The inverse is an integration operator for the family, and it is simply the tridiagonal coefficient matrix for the recurrence. Since in these families convolution operators (i.e. matrix representations of multiplication by a function) are banded for polynomials, we are able to obtain a banded representation for linear differential operators with rational coefficients. This leads to a method of solution of initial or boundary value problems that, besides having an operation count that scales linearly with the order of truncation N, is computationally well conditioned. Among the applications considered is the use of rational maps for the resolution of sharp interior layers.

  4. Spectral properties and highly efficient continuous-wave laser operation in Nd-doped Sr(1-x)Y(x)F(2+x) crystals.

    PubMed

    Ma, F K; Jiang, D P; Su, L B; Wang, J Y; Cai, W; Liu, J; Zheng, J G; Zheng, W G; Xu, J; Liu, Y

    2016-02-01

    Spectral properties of Nd:Sr(1-x)Y(x)F(2+x) crystals were investigated. Compared with Nd:SrF2, the spectral parameters of Nd:Sr(1-x)Y(x)F(2+x) (x=0.05,0.1) were altered in a large scale. LD-pumped true CW laser has been demonstrated in the crystals. The slope efficiency up to 43.5% in 0.43% Nd:Sr0.95Y0.05F2.05 was achieved. The system is a promising candidate for highly efficient lasers.

  5. The Newmark scheme as velocity-stress time-staggering: an efficient PML implementation for spectral element simulations of elastodynamics

    NASA Astrophysics Data System (ADS)

    Festa, Gaetano; Vilotte, Jean-Pierre

    2005-06-01

    Perfectly matched layers (PMLs) provide an exponential decay, independent of the frequency, of any propagating field along an assigned direction without producing spurious reflections at the interface with the elastic volume. For this reason PMLs have been applied as absorbing boundary conditions (ABCs) and their efficiency in attenuating outgoing wave fields on the outskirts of numerical grids is more and more recognized. However, PMLs are designed for first-order differential equations and a natural extension to second-order Partial Differential Equations (PDEs) involves either additional variables in the time evolution scheme or convolutional operations. Both techniques are computationally expensive when implemented in a spectral element (SE) code and other ABCs (e.g. paraxial or standard sponge methods) still remain more attractive than PMLs. Here, an efficient second-order implementation of PMLs for SE is developed from interpreting the Newmark scheme as a time-staggered velocity-stress algorithm. The discrete equivalence with the standard scheme is based on an L2 approximation of the stress field, with the same polynomial order as the velocity. In this case, PMLs can be introduced as for first-order equations preserving the natural second-order time stepping. Subsequently, a non-classical frequency-dependent perfectly matched layer is introduced by moving the pole of the stretching along the imaginary axis. In this case, the absorption depends on the frequency and the layer switches from a transparent behaviour at low frequencies to a uniform absorption as the frequency goes to infinity. It turns out to be more efficient than classical PMLs in the absorption of the incident waves, as the grazing incidence approaches, at the cost of a memory variable for any split component. Finally, an extension of PMLs to general curvilinear coordinates is proposed.

  6. In vivo tear film thickness measurement and tear film dynamics visualization using spectral domain OCT and an efficient delay estimator

    NASA Astrophysics Data System (ADS)

    Aranha dos Santos, Valentin; Schmetterer, Leopold; Gröschl, Martin; Garhofer, Gerhard; Werkmeister, René M.

    2016-03-01

    Dry eye syndrome is a highly prevalent disease of the ocular surface characterized by an instability of the tear film. Traditional methods used for the evaluation of tear film stability are invasive or show limited repeatability. Here we propose a new noninvasive approach to measure tear film thickness using an efficient delay estimator and ultrahigh resolution spectral domain OCT. Silicon wafer phantoms with layers of known thickness and group index were used to validate the estimator-based thickness measurement. A theoretical analysis of the fundamental limit of the precision of the estimator is presented and the analytical expression of the Cramér-Rao lower bound (CRLB), which is the minimum variance that may be achieved by any unbiased estimator, is derived. The performance of the estimator against noise was investigated using simulations. We found that the proposed estimator reaches the CRLB associated with the OCT amplitude signal. The technique was applied in vivo in healthy subjects and dry eye patients. Series of tear film thickness maps were generated, allowing for the visualization of tear film dynamics. Our results show that the central tear film thickness precisely measured in vivo with a coefficient of variation of about 0.65% and that repeatable tear film dynamics can be observed. The presented method has the potential of being an alternative to breakup time measurements (BUT) and could be used in clinical setting to study patients with dry eye disease and monitor their treatments.

  7. Heterodyne coherent detection of WDM PDM-QPSK signals with spectral efficiency of 4b/s/Hz.

    PubMed

    Li, Xinying; Dong, Ze; Yu, Jianjun; Yu, Jianguo; Chi, Nan

    2013-04-01

    We experimentally demonstrate heterodyne coherent detection of 8 × 112-Gb/s ultra-density wavelength-division-multiplexing (WDM) polarization-division-multiplexing quadrature-phase-shift-keying (PDM-QPSK) signal after 1120-km single-mode fiber-28 (SMF-28) transmission. The spectral efficiency (SE) is 4b/s/Hz. It is the first time to realize WDM signal transmission with high SE by adopting heterodyne coherent detection. At the heterodyne coherent receiver, intermediate frequency (IF) down conversion is realized in digital frequency domain after analog-to-digital conversion. A digital post filter and 1-bit maximum likelihood sequence estimation (MLSE) adopted after carrier phase estimation (CPE) in the conventional digital-signal-processing (DSP) process is used to suppress the enhanced noise and crosstalk as well as overcome the filtering effects. The bit-error ratio (BER) for all channels is under the forward-error-correction (FEC) limit of 3.8 × 10(-3) after 1120-km SMF-28 transmission.

  8. Antiplatelet Aggregation and Antithrombosis Efficiency of Peptides in the Snake Venom of Deinagkistrodon acutus: Isolation, Identification, and Evaluation

    PubMed Central

    Ding, Bin; Xu, Zhenghong; Qian, Chaodong; Jiang, Fusheng; Ding, Xinghong; Ruan, Yeping; Ding, Zhishan; Fan, Yongsheng

    2015-01-01

    Two peptides of Pt-A (Glu-Asn-Trp 429 Da) and Pt-B (Glu-Gln-Trp 443 Da) were isolated from venom liquor of Deinagkistrodon acutus. Their antiplatelet aggregation effects were evaluated with platelet-rich human plasma in vitro; the respective IC50 of Pt-A and Pt-B was 66 μM and 203 μM. Both peptides exhibited protection effects on ADP-induced paralysis in mice. After ADP administration, the paralysis time of different concentration of Pt-A and Pt-B lasted as the following: 80 mg/kg Pt-B (152.8 ± 57.8 s) < 40 mg/kg Pt-A (163.5 ± 59.8 s) < 20 mg/kg Pt-A (253.5 ± 74.5 s) < 4 mg/kg clopidogrel (a positive control, 254.5 ± 41.97 s) < 40 mg/kg Pt-B (400.8 ± 35.9 s) < 10 mg/kg Pt-A (422.8 ± 55.4 s), all of which were statistically shorter than the saline treatment (666 ± 28 s). Pulmonary tissue biopsy confirmed that Pt-A and Pt-B prevented the formation of thrombi in the lung. Unlike ADP injection alone, which caused significant reduction of peripheral platelet count, Pt-A treatment prevented the drop of peripheral platelet counts; interestingly, Pt-B could not, even though the same amount of Pt-B also showed protection effects on ADP-induced paralysis and thrombosis. More importantly, intravenous injection of Pt-A and Pt-B did not significantly increase the hemorrhage risks as clopidogrel. PMID:26483843

  9. Molecular engineering of simple phenothiazine-based dyes to modulate dye aggregation, charge recombination, and dye regeneration in highly efficient dye-sensitized solar cells.

    PubMed

    Hua, Yong; Chang, Shuai; He, Jian; Zhang, Caishun; Zhao, Jianzhang; Chen, Tao; Wong, Wai-Yeung; Wong, Wai-Kwok; Zhu, Xunjin

    2014-05-19

    A series of simple phenothiazine-based dyes, namely, TP, EP, TTP, ETP, and EEP have been developed, in which the thiophene (T), ethylenedioxythiophene (E), their dimers, and mixtures are present to modulate dye aggregation, charge recombination, and dye regeneration for highly efficient dye-sensitized solar cell (DSSC) applications. Devices sensitized by the dyes TP and TTP display high power conversion efficiencies (PCEs) of 8.07 (Jsc = 15.2 mA cm(-2), Voc =0.783 V, fill factor (FF) = 0.679) and 7.87 % (Jsc = 16.1 mA cm(-2), Voc = 0.717 V, FF = 0.681), respectively; these were measured under simulated AM 1.5 sunlight in conjunction with the I(-)/I3(-) redox couple. By replacing the T group with the E unit, EP-based DSSCs had a slightly lower PCE of 7.98 % with a higher short-circuit photocurrent (Jsc) of 16.7 mA cm(-2). The dye ETP, with a mixture of E and T, had an even lower PCE of 5.62 %. Specifically, the cell based on the dye EEP, with a dimer of E, had inferior Jsc and Voc values and corresponded to the lowest PCE of 2.24 %. The results indicate that the photovoltaic performance can be finely modulated through structural engineering of the dyes. The selection of T analogues as donors can not only modulate light absorption and energy levels, but also have an impact on dye aggregation and interfacial charge recombination of electrons at the interface of titania, electrolytes, and/or oxidized dye molecules; this was demonstrated through DFT calculations, electrochemical impedance analysis, and transient photovoltage studies.

  10. Layer-by-layer films and colloidal dispersions of graphene oxide nanosheets for efficient control of the fluorescence and aggregation properties of the cationic dye acridine orange

    NASA Astrophysics Data System (ADS)

    Hansda, Chaitali; Chakraborty, Utsav; Hussain, Syed Arshad; Bhattacharjee, Debajyoti; Paul, Pabitra Kumar

    2016-03-01

    Chemically derived graphene oxide (GO) nanosheets have received great deal of interest for technological application such as optoelectronic and biosensors. Aqueous dispersions of GO become an efficient template to induce the association of cationic dye namely Acridine Orange (AO). Interactions of AO with colloidal GO was governed by both electrostatic and π-π stacking cooperative interactions. The type of dye aggregations was found to depend on the concentration of GO in the mixed ensemble. Spectroscopic calculations revealed the formation of both H and J-type dimers, but H-type aggregations were predominant. Preparation of layer-by-layer (LbL) electrostatic self-assembled films of AO and GO onto poly (allylamine hydrochloride) (PAH) coated quartz substrate is also reported in this article. UV-Vis absorption, steady state and time resolve fluorescence and Raman spectroscopic techniques have been employed to explore the detail photophysical properties of pure AO, AO/GO mixed solution and AO/GO LbL films. Scanning electron microscopy was also used for visual evidence of the synthesized nanodimensional GO sheets. The fluorescence quenching of AO in the presence of GO in aqueous solution was due to the interfacial photoinduced electron transfer (PET) from photoexcited AO to GO i.e. GO acts as an efficient quenching agent for the fluorescence emission of AO. The quenching is found to be static in nature. Raman spectroscopic results also confirmed the interaction of AO with GO and the electron transfer. The formation of AO/GO complex via very fast excited state electron transfer mechanism may be proposed as to prepare GO-based fluorescence sensor for biomolecular detection without direct labeling the biomolecules by fluorescent probe.

  11. The Energy-Efficient Quarry: Towards improved understanding and optimisation of energy use and minimisation of CO2 generation in the aggregates industry.

    NASA Astrophysics Data System (ADS)

    Hill, Ian; White, Toby; Owen, Sarah

    2014-05-01

    Extraction and processing of rock materials to produce aggregates is carried out at some 20,000 quarries across the EU. All stages of the processing and transport of hard and dense materials inevitably consume high levels of energy and have consequent significant carbon footprints. The FP7 project "the Energy Efficient Quarry" (EE-Quarry) has been addressing this problem and has devised strategies, supported by modelling software, to assist the quarrying industry to assess and optimise its energy use, and to minimise its carbon footprint. Aggregate quarries across Europe vary enormously in the scale of the quarrying operations, the nature of the worked mineral, and the processing to produce a final market product. Nevertheless most quarries involve most or all of a series of essential stages; deposit assessment, drilling and blasting, loading and hauling, and crushing and screening. The process of determining the energy-efficiency of each stage is complex, but is broadly understood in principle and there are numerous sources of information and guidance available in the literature and on-line. More complex still is the interaction between each of these stages. For example, using a little more energy in blasting to increase fragmentation may save much greater energy in later crushing and screening, but also generate more fines material which is discarded as waste and the embedded energy in this material is lost. Thus the calculation of the embedded energy in the waste material becomes an input to the determination of the blasting strategy. Such feedback loops abound in the overall quarry optimisation. The project has involved research and demonstration operations at a number of quarries distributed across Europe carried out by all partners in the EE-Quarry project, working in collaboration with many of the major quarrying companies operating in the EU. The EE-Quarry project is developing a sophisticated modelling tool, the "EE-Quarry Model" available to the quarrying

  12. A Red to Near-IR Fluorogen: Aggregation-Induced Emission, Large Stokes Shift, High Solid Efficiency and Application in Cell-Imaging.

    PubMed

    Wang, Yi Jia; Shi, Yang; Wang, Zhaoyang; Zhu, Zhenfeng; Zhao, Xinyuan; Nie, Han; Qian, Jun; Qin, Anjun; Sun, Jing Zhi; Tang, Ben Zhong

    2016-07-01

    A tetraphenylethene (TPE) derivative modified with the strong electron acceptor 2-dicyano-methylene-3-cyano-4,5,5-trimethyl-2,5-dihydrofuran (TCF) was obtained in high yield by a simple two-step reaction. The resultant TPE-TCF showed evident aggregation-induced emission (AIE) features and pronounced solvatochromic behavior. Changing the solvent from apolar cyclohexane to highly polar acetonitrile, the emission peak shifted from 560 to 680 nm (120 nm redshift). In an acetonitrile solution and in the solid powder, the Stokes shifts are as large as 230 and 190 nm, respectively. The solid film emits red to near-IR (red-NIR) fluorescence with an emission peak at 670 nm and a quantum efficiency of 24.8 %. Taking the advantages of red-NIR emission and high efficiency, nanoparticles (NPs) of TPE-TCF were fabricated by using tat-modified 1,2-distearoylsn-glycero-3-phosphor-ethanol-amine-N-[methoxy-(polyethyl-eneglycol)-2000] as the encapsulation matrix. The obtained NPs showed perfect membrane penetrability and high fluorescent imaging quality of cell cytoplasm. Upon co-incubation with 4,6-diamidino-2-phenylindole (DAPI) in the presence of tritons, the capsulated TPE-TCF nanoparticles could enter into the nucleus and displayed similar staining properties to those of DAPI.

  13. A Red to Near-IR Fluorogen: Aggregation-Induced Emission, Large Stokes Shift, High Solid Efficiency and Application in Cell-Imaging.

    PubMed

    Wang, Yi Jia; Shi, Yang; Wang, Zhaoyang; Zhu, Zhenfeng; Zhao, Xinyuan; Nie, Han; Qian, Jun; Qin, Anjun; Sun, Jing Zhi; Tang, Ben Zhong

    2016-07-01

    A tetraphenylethene (TPE) derivative modified with the strong electron acceptor 2-dicyano-methylene-3-cyano-4,5,5-trimethyl-2,5-dihydrofuran (TCF) was obtained in high yield by a simple two-step reaction. The resultant TPE-TCF showed evident aggregation-induced emission (AIE) features and pronounced solvatochromic behavior. Changing the solvent from apolar cyclohexane to highly polar acetonitrile, the emission peak shifted from 560 to 680 nm (120 nm redshift). In an acetonitrile solution and in the solid powder, the Stokes shifts are as large as 230 and 190 nm, respectively. The solid film emits red to near-IR (red-NIR) fluorescence with an emission peak at 670 nm and a quantum efficiency of 24.8 %. Taking the advantages of red-NIR emission and high efficiency, nanoparticles (NPs) of TPE-TCF were fabricated by using tat-modified 1,2-distearoylsn-glycero-3-phosphor-ethanol-amine-N-[methoxy-(polyethyl-eneglycol)-2000] as the encapsulation matrix. The obtained NPs showed perfect membrane penetrability and high fluorescent imaging quality of cell cytoplasm. Upon co-incubation with 4,6-diamidino-2-phenylindole (DAPI) in the presence of tritons, the capsulated TPE-TCF nanoparticles could enter into the nucleus and displayed similar staining properties to those of DAPI. PMID:27265326

  14. An efficient and safe process for the preparation of ticagrelor, a platelet aggregation inhibitor via resin-NO2 catalyzed formation of triazole ring.

    PubMed

    Shinde, Gorakshanath B; Mahale, Pravin K; Padaki, Santhosh A; Niphade, Navnath C; Toche, Raghunath B; Mathad, Vijayavitthal T

    2015-01-01

    An efficient, safe and improved process for the preparation of ticagrelor 1, a platelet aggregation inhibitor is described. Synthesis comprises the condensation of pyrimidine amine derivative 14 with cyclopentyl derivative 13 in ethylene glycol followed by construction of triazole compound 16 by diazotization of the obtained intermediate 15 with a green and safer reagent "Resin-NO2" in water and acetonitrile mixture. Condensation of 16 with cyclopropylamine derivative 10 followed by deprotection of compound 12 with hydrochloric acid in dichloromethane (DCM) furnished ticagrelor 1 with an overall yield of 65 % and purity of 99.78 % by HPLC. Each reaction stage was optimized independently to establish the scalable and plant friendly process. An efficient and a safe process for key intermediate 14 which involve nitration reaction has also been developed. Safety parameters were established by understanding the thermal events of the reaction by DSC analysis.Graphical abstractSynthesis of ticagrelor via resin-NO2 catalysed formation of triazole ring. PMID:26389018

  15. Transient aggregation of chitosan-modified poly(d,l-lactic-co-glycolic) acid nanoparticles in the blood stream and improved lung targeting efficiency.

    PubMed

    Lee, Song Yi; Jung, Eunjae; Park, Ju-Hwan; Park, Jin Woo; Shim, Chang-Koo; Kim, Dae-Duk; Yoon, In-Soo; Cho, Hyun-Jong

    2016-10-15

    Chitosan (CS)-modified poly(d,l-lactic-co-glycolic) acid (PLGA) nanoparticles (NPs) were prepared and their lung targetability after intravenous administration was elucidated. PLGA NPs (mean diameter: 225nm; polydispersity index: 0.11; zeta potential: -15mV), 0.2% (w/v) CS-coated PLGA NPs (CS02-PLGA NPs, mean diameter: 264nm; polydispersity index: 0.17; zeta potential: -7mV), and 0.5% (w/v) CS-coated PLGA NPs (CS05-PLGA NPs, mean diameter: 338nm; polydispersity index: 0.23; zeta potential: 12mV) were fabricated by a modified solvent evaporation method. PLGA NPs maintained their initial particle size in different media, such as human serum albumin (HSA) solution, rat plasma, and distilled water (DW), while CS05-PLGA NPs exhibited the formation of aggregates in early incubation time and disassembly of those into the NPs in late incubation time (at 24h). According to the sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) analysis, the binding affinity of CS05-PLGA NPs with HSA and rat plasma was higher than that of PLGA NPs. By a near-infrared fluorescence (NIRF) imaging test in the mouse, the selective accumulation of CS05-PLGA NPs, rather than PLGA NPs, in lung tissue was demonstrated. These findings suggest that CS05-PLGA NPs can form transient aggregates in the blood stream after intravenous administration and markedly improve lung targeting efficiency, compared with PLGA NPs. PMID:27421112

  16. Electrodynamic and excitonic intertube interactions in semiconducting carbon nanotube aggregates.

    PubMed

    Crochet, Jared J; Sau, Jay D; Duque, Juan G; Doorn, Stephen K; Cohen, Marvin L

    2011-04-26

    The optical properties of selectively aggregated, nearly single chirality single-wall carbon nanotubes were investigated by both continuous-wave and time-resolved spectroscopies. With reduced sample heterogeneities, we have resolved aggregation-dependent reductions of the excitation energy of the S(1) exciton and enhanced electron-hole pair absorption. Photoluminescence spectra revealed a spectral splitting of S(1) and simultaneous reductions of the emission efficiencies and nonradiative decay rates. The observed strong deviations from isolated tube behavior are accounted for by enhanced screening of the intratube Coulomb interactions, intertube exciton tunneling, and diffusion-driven exciton quenching. We also provide evidence that density gradient ultracentrifugation can be used to structurally sort single-wall carbon nanotubes by aggregate size as evident by a monotonic dependence of the aforementioned optical properties on buoyant density.

  17. Spectral fluctuation dividing for efficient wavenumber selection: application to estimation of water and drug content in granules using near infrared spectroscopy.

    PubMed

    Miyano, Takuya; Kano, Manabu; Tanabe, Hideaki; Nakagawa, Hiroshi; Watanabe, Tomoyuki; Minami, Hidemi

    2014-11-20

    In process analytical technology (PAT) based on near infrared (NIR) spectroscopy, wavenumber selection is crucial to develop an accurate and robust calibration model. The present research proposes new efficient spectral dividing and wavenumber selection methods to significantly reduce the computational load required by conventional wavenumber selection methods such as interval partial least squares (iPLS). The proposed method, named spectral fluctuation dividing (SFD), divides a whole spectrum into multiple spectral intervals at local minimum points of the spectral fluctuation profile, which consists of the standard deviation of absorbance at each wavenumber in a calibration set. SFD is combined with PLS (SFD-PLS) to select the spectral intervals at which input variables have significant influence on a target response. The usefulness of SFD-PLS was demonstrated through its application to the problems of estimating water and drug content in granules. PLS models based on SFD-PLS achieved higher estimation accuracy than those based on conventional methods including iPLS, PLS-beta, and variable influence on projection (VIP). In addition, SFD-PLS was more than 10 times faster than the conventional variable selection methods including PLS-beta and VIP; in particular, SFD-PLS was more than 25 times faster than iPLS. Consequently, the proposed SFD-PLS is a promising wavenumber selection method.

  18. Construction aggregates

    USGS Publications Warehouse

    Langer, W.H.; Tepordei, V.V.; Bolen, W.P.

    2000-01-01

    Construction aggregates consist primarily of crushed stone and construction sand and gravel. Total estimated production of construction aggregates increased in 1999 by about 2% to 2.39 Gt (2.64 billion st) compared with 1998. This record production level continued an expansion that began in 1992. By commodities, crushed stone production increased 3.3%, while sand and gravel production increased by about 0.5%.

  19. Construction aggregates

    USGS Publications Warehouse

    Tepordei, V.V.

    1994-01-01

    Part of a special section on industrial minerals in 1993. The 1993 production of construction aggregates increased 6.3 percent over the 1992 figure, to reach 2.01 Gt. This represents the highest estimated annual production of combined crushed stone and construction sand and gravel ever recorded in the U.S. The outlook for construction aggregates and the issues facing the industry are discussed.

  20. OPTIMOS-EVE optical design of a very efficient, high-multiplex, large spectral coverage, fiber-fed spectrograph at EELT

    NASA Astrophysics Data System (ADS)

    Spanò, P.; Tosh, I.; Chemla, F.

    2010-07-01

    OPTIMOS-EVE is a fiber-fed, high-multiplex, high-efficiency, large spectral coverage spectrograph for EELT covering visible and near-infrared simultaneously. More than 200 seeing-limited objects will be observed at the same time over the full 7 arcmin field of view of the telescope, feeding the spectrograph, asking for very large multiplexing at the spectrograph side. The spectrograph consists of two identical units. Each unit will have two optimized channels to observe both visible and near-infrared wavelengths at the same time, covering from 0.37 to 1.7 micron. To maximize the scientific return, a large simultaneous spectral coverage per exposure was required, up to 1/3 of the central wavelength. Moreover, different spectral resolution modes, spanning from 5'000 to 30'000, were defined to match very different sky targets. Many different optical solutions were generated during the initial study phase in order to select that one that will maximize performances within given constraints (mass, space, cost). Here we present the results of this study, with special attention to the baseline design. Efforts were done to keep size of the optical components well within present state-of-the-art technologies. For example, large glass blank sizes were limited to ~35 cm maximum diameter. VPH gratings were selected as dispersers, to improve efficiency, following their superblaze curve. This led to scanning gratings and cameras. Optical design will be described, together with expected performances.

  1. Construction aggregates

    USGS Publications Warehouse

    Nelson, T.I.; Bolen, W.P.

    2007-01-01

    Construction aggregates, primarily stone, sand and gravel, are recovered from widespread naturally occurring mineral deposits and processed for use primarily in the construction industry. They are mined, crushed, sorted by size and sold loose or combined with portland cement or asphaltic cement to make concrete products to build roads, houses, buildings, and other structures. Much smaller quantities are used in agriculture, cement manufacture, chemical and metallurgical processes, glass production and many other products.

  2. Construction aggregates

    USGS Publications Warehouse

    Tepordei, V.V.

    1996-01-01

    Part of the Annual Commodities Review 1995. Production of construction aggregates such as crushed stone and construction sand and gravel showed a marginal increase in 1995. Most of the 1995 increases were due to funding for highway construction work. The major areas of concern to the industry included issues relating to wetlands classification and the classification of crystalline silica as a probable human carcinogen. Despite this, an increase in demand is anticipated for 1996.

  3. Construction aggregates

    USGS Publications Warehouse

    Tepordei, V.V.

    1993-01-01

    Part of a special section on the market performance of industrial minerals in 1992. Production of construction aggregates increased by 4.6 percent in 1992. This increase was due, in part, to the increased funding for transportation and infrastructure projects. The U.S. produced about 1.05 Gt of crushed stone and an estimated 734 Mt of construction sand and gravel in 1992. Demand is expected to increase by about 5 percent in 1993.

  4. Efficiency of using the spectral dynamics analysis for pulsed THz spectroscopy of both explosive and other materials

    NASA Astrophysics Data System (ADS)

    Trofimov, Vyacheslav A.; Varentsova, Svetlana A.

    2015-05-01

    One of the modern problems arising in the detection and identification of substances is a development of criteria for the assessment of a presence of explosive (or other dangerous substance) fingerprints in THz signals transmitted through or reflected from a sample. Obviously, criteria depend on the method used for the substance detection and identification. Taking into account our previous experience, we use for a solution of this problem the SDA method (method of the spectral dynamics analysis). Essential restrictions of usually used THz TDS method for the detection and identification under real conditions (at long distance about 3.5 m and at a high relative humidity more than 50%) are demonstrated using the physical experiment with paper napkins and thick paper bag. We show also that the THz TDS method detects spectral features of dangerous substances even in the THz signals measured in laboratory conditions (at distance 30-40 cm from the receiver and at a low relative humidity less than 2%) with semiconductors of different types used as samples. However, the integral correlation criteria, based on SDA method, allows us to detect the absence of dangerous substances in semiconductors. In order to demonstrate the possibilities of the integral criteria for finding additional substances in the mixture with semiconductors, we modeled several mixtures of n-doped Silicon with neutral substance Soap in different ratio. The discussed algorithms show high probability of the substance identification and a reliability of realization in practice, especially for non-destructive testing and security applications.

  5. Efficient nanosecond optical parametric oscillators based on periodically poled KTP emitting in the 1.8-2.5-mum spectral region.

    PubMed

    Hellström, J; Pasiskevicius, V; Laurell, F; Karlsson, H

    1999-09-01

    The use of periodically poled KTiOPO(4) as a gain medium in efficient nanosecond optical parametric oscillators pumped by a flash-lamp-pumped Q-switched Nd:YAG laser is demonstrated. Parametric radiation in the 1.8-2.5-mu m spectral region was achieved when the crystal temperature was tuned from 10 to 100 degrees C. A maximum total output energy of 1.8 mJ was obtained at a pump level of 3.5 mJ. Stable operation was achieved, with conversion efficiencies reaching 50%. No gray tracking or laser damage was observed, even for pump intensities of 450MW/cm(2). PMID:18073994

  6. Ultra-High Efficiency, High-Concentration PV System Based On Spectral Division Between GaInP/GaInAs/Ge And BPC Silicon Cells

    NASA Astrophysics Data System (ADS)

    Benítez, P.; Mohedano, R.; Buljan, M.; Miñano, J. C.; Sun, Y.; Falicoff, W.; Vilaplana, J.; Chaves, J.; Biot, G.; López, J.

    2011-12-01

    A novel HCPV nonimaging concentrator concept with high concentration (>500×) is presented. It uses the combination of a commercial concentration GaInP/GaInAs/Ge 3J cell and a concentration Back-Point-Contact (BPC) concentration silicon cell for efficient spectral utilization, and external confinement techniques for recovering the 3J cell's reflection. The primary optical element (POE) is a flat Fresnel lens and the secondary optical element (SOE) is a free-form RXI-type concentrator with a band-pass filter embedded it, both POE and SOE performing Köhler integration to produce light homogenization. The band-pass filter sends the IR photons in the 900-1200 nm band to the silicon cell. Computer simulations predict that four-terminal terminal designs could achieve ˜46% added cell efficiencies using commercial 39% 3J and 26% Si cells. A first proof-of concept receiver prototype has been manufactured using a simpler optical architecture (with a lower concentration, ˜100× and lower simulated added efficiency), and experimental measurements have shown up to 39.8% 4J receiver efficiency using a 3J with peak efficiency of 36.9%.

  7. A simple, efficient, and high-order accurate curved sliding-mesh interface approach to spectral difference method on coupled rotating and stationary domains

    NASA Astrophysics Data System (ADS)

    Zhang, Bin; Liang, Chunlei

    2015-08-01

    This paper presents a simple, efficient, and high-order accurate sliding-mesh interface approach to the spectral difference (SD) method. We demonstrate the approach by solving the two-dimensional compressible Navier-Stokes equations on quadrilateral grids. This approach is an extension of the straight mortar method originally designed for stationary domains [7,8]. Our sliding method creates curved dynamic mortars on sliding-mesh interfaces to couple rotating and stationary domains. On the nonconforming sliding-mesh interfaces, the related variables are first projected from cell faces to mortars to compute common fluxes, and then the common fluxes are projected back from the mortars to the cell faces to ensure conservation. To verify the spatial order of accuracy of the sliding-mesh spectral difference (SSD) method, both inviscid and viscous flow cases are tested. It is shown that the SSD method preserves the high-order accuracy of the SD method. Meanwhile, the SSD method is found to be very efficient in terms of computational cost. This novel sliding-mesh interface method is very suitable for parallel processing with domain decomposition. It can be applied to a wide range of problems, such as the hydrodynamics of marine propellers, the aerodynamics of rotorcraft, wind turbines, and oscillating wing power generators, etc.

  8. Photosystem Trap Energies and Spectrally-Dependent Energy-Storage Efficiencies in the Chl d-Utilizing Cyanobacterium, Acaryochloris Marina

    NASA Technical Reports Server (NTRS)

    Mielke, Steven P.; Kiang, Nancy Y.; Blankenship, Robert E.; Mauzerall, David

    2012-01-01

    Acaryochloris marina is the only species known to utilize chlorophyll (Chl) d as a principal photopigment. The peak absorption wavelength of Chl d is redshifted approx. 40 nm in vivo relative to Chl a, enabling this cyanobacterium to perform oxygenic phototrophy in niche environments enhanced in far-red light. We present measurements of the in vivo energy-storage (E-S) efficiency of photosynthesis in A. marina, obtained using pulsed photoacoustics (PA) over a 90-nm range of excitation wavelengths in the red and far-red. Together with modeling results, these measurements provide the first direct observation of the trap energies of PSI and PSII, and also the photosystem-specific contributions to the total E-S efficiency. We find the maximum observed efficiency in A. marina (40+/-1% at 735 nm) is higher than in the Chl a cyanobacterium Synechococcus leopoliensis (35+/-1% at 690 nm). The efficiency at peak absorption wavelength is also higher in A. marina (36+/-1% at 710 nm vs. 31+/-1% at 670 nm). In both species, the trap efficiencies are approx. 40% (PSI) and approx. 30% (PSII). The PSI trap in A. marina is found to lie at 740+/-5 nm, in agreement with the value inferred from spectroscopic methods. The best fit of the model to the PA data identifies the PSII trap at 723+/-3 nm, supporting the view that the primary electron-donor is Chl d, probably at the accessory (ChlD1) site. A decrease in efficiency beyond the trap wavelength, consistent with uphill energy transfer, is clearly observed and fit by the model. These results demonstrate that the E-S efficiency in A. marina is not thermodynamically limited, suggesting that oxygenic photosynthesis is viable in even redder light environments.

  9. Construction aggregates

    USGS Publications Warehouse

    Bolen, W.P.; Tepordei, V.V.

    2001-01-01

    The estimated production during 2000 of construction aggregates, crushed stone, and construction sand and gravel increased by about 2.6% to 2.7 Gt (3 billion st), compared with 1999. The expansion that started in 1992 continued with record production levels for the ninth consecutive year. By commodity, construction sand and gravel production increased by 4.5% to 1.16 Gt (1.28 billion st), while crushed stone production increased by 1.3% to 1.56 Gt (1.72 billion st).

  10. High efficiency direct thermal to electric energy conversion from radioisotope decay using selective emitters and spectrally tuned solar cells

    NASA Technical Reports Server (NTRS)

    Chubb, Donald L.; Flood, Dennis J.; Lowe, Roland A.

    1993-01-01

    Thermophotovoltaic (TPV) systems are attractive possibilities for direct thermal-to-electric energy conversion, but have typically required the use of black body radiators operating at high temperatures. Recent advances in both the understanding and performance of solid rare-earth oxide selective emitters make possible the use of TPV at temperatures as low as 1200K. Both selective emitter and filter system TPV systems are feasible. However, requirements on the filter system are severe in order to attain high efficiency. A thin-film of a rare-earth oxide is one method for producing an efficient, rugged selective emitter. An efficiency of 0.14 and power density of 9.2 W/KG at 1200K is calculated for a hypothetical thin-film neodymia (Nd2O3) selective emitter TPV system that uses radioisotope decay as the thermal energy source.

  11. Effect of high energy proton irradiation on InAs/GaAs quantum dots: Enhancement of photoluminescence efficiency (up to {approx}7 times) with minimum spectral signature shift

    SciTech Connect

    Sreekumar, R.; Mandal, A.; Gupta, S.K.; Chakrabarti, S.

    2011-11-15

    Graphical abstract: Authors demonstrate enhancement in photoluminescence efficiency (7 times) in single layer InAs/GaAs quantum dots using proton irradiation without any post-annealing treatment via either varying proton energy (a) or fluence (b). The increase in PL efficiency is explained by a proposed model before (c) and after irradiation (d). Highlights: {yields} Proton irradiation improved PL efficiency in InAs/GaAs quantum dots (QDs). {yields} Proton irradiation favoured defect and strain annihilation in InAs/GaAs QDs. {yields} Reduction in defects/non-radiative recombination improved PL efficiency. {yields} Protons could be used to improve PL efficiency without spectral shift. {yields} QD based devices will be benefited by this technique to improve device performance. -- Abstract: We demonstrate 7-fold increase of photoluminescence efficiency in GaAs/(InAs/GaAs) quantum dot hetero-structure, employing high energy proton irradiation, without any post-annealing treatment. Protons of energy 3-5 MeV with fluence in the range (1.2-7.04) x 10{sup 12} ions/cm{sup 2} were used for irradiation. X-ray diffraction analysis revealed crystalline quality of the GaAs cap layer improves on proton irradiation. Photoluminescence study conducted at low temperature and low laser excitation density proved the presence of non-radiative recombination centers in the system which gets eliminated on proton irradiation. Shift in photoluminescence emission towards higher wavelength upon irradiation substantiated the reduction in strain field existed between GaAs cap layer and InAs/GaAs quantum dots. The enhancement in PL efficiency is thus attributed to the annihilation of defects/non-radiative recombination centers present in GaAs cap layer as well as in InAs/GaAs quantum dots induced by proton irradiation.

  12. Efficient noncollinear parametric amplification of weak femtosecond pulses in the visible and near-infrared spectral range.

    PubMed

    Krylov, V; Ollikainen, O; Gallus, J; Wild, U; Rebane, A; Kalintsev, A

    1998-01-15

    We report measurement of efficient amplification of weak femtosecond supercontinuum seed pulses by use of a noncollinear optical parametric process in BBO crystal pumped with 150-fs pulses from a frequency-doubled regenerative-amplified Ti:sapphire laser at 390nm . The highest amplification factor, 10(8) , was achieved for 3x10(-16)J energy seed pulses at wavelength of 560nm.

  13. Spectral and angular dependences of the efficiency of relief-phase diffractive lenses with two- and three-layer microstructures

    NASA Astrophysics Data System (ADS)

    Greisukh, G. I.; Danilov, V. A.; Ezhov, E. G.; Stepanov, S. A.; Usievich, B. A.

    2015-06-01

    The efficiency of diffractive lenses with two-layer single-relief and three-layer double-relief microstructures is studied. Studies are carried out using the scalar and electromagnetic diffraction theories. Depending on the requirements for the diffractive lens, the theories permit one to justifiably choose the configuration, optical materials, and constructive parameters of the microstructure, as well as to determine the real maximum allowable angle of radiation incidence on the diffractive lens with the microstructure of a particular type.

  14. Comparison of advanced DSP techniques for spectrally efficient Nyquist-WDM signal generation using digital FIR filters at transmitters based on higher-order modulation formats

    NASA Astrophysics Data System (ADS)

    Weng, Yi; Wang, Junyi; Pan, Zhongqi

    2016-02-01

    To support the ever-increasing demand for high-speed optical communications, Nyquist spectral shaping serves as a promising technique to improve spectral efficiency (SE) by generating near-rectangular spectra with negligible crosstalk and inter-symbol interference in wavelength-division-multiplexed (WDM) systems. Compared with specially-designed optical methods, DSP-based electrical filters are more flexible as they can generate different filter shapes and modulation formats. However, such transmitter-side pre-filtering approach is sensitive to the limited taps of finite-impulse-response (FIR) filter, for the complexity of the required DSP and digital-to-analog converter (DAC) is limited by the cost and power consumption of optical transponder. In this paper, we investigate the performance and complexity of transmitter-side FIR-based DSP with polarization-division-multiplexing (PDM) high-order quadrature-amplitude-modulation (QAM) formats. Our results show that Nyquist 64-QAM, 16-QAM and QPSK WDM signals can be sufficiently generated by digital FIR filters with 57, 37, and 17 taps respectively. Then we explore the effects of the required spectral pre-emphasis, bandwidth and resolution on the performance of Nyquist-WDM systems. To obtain negligible OSNR penalty with a roll-off factor of 0.1, two-channel-interleaved DAC requires a Gaussian electrical filter with the bandwidth of 0.4-0.6 times of the symbol rate for PDM-64QAM, 0.35-0.65 times for PDM-16QAM, and 0.3-0.8 times for PDM-QPSK, with required DAC resolutions as 8, 7, 6 bits correspondingly. As a tradeoff, PDM-64QAM can be a promising candidate for SE improvement in next-generation optical metro networks.

  15. [Estimation of light-use efficiency of China' s mid-subtropical planted coniferous forest based on flux measurements and spectral observations].

    PubMed

    Chen, Die-cong; Wang, Shao-qiang; Huang, Kun; Zhou, Lei; Yu, Quan-zhou; Wang, Hui-min; Sun, Lei-gang

    2015-11-01

    The photochemical reflectance index (PRI) calculated from spectral reflectance has universally become a proxy for the light-use efficiency (LUE), which significantly improves the LUE-based estimation of ecosystem gross primary productivity on a large scale through upscaling. In this study, we observed the vegetation spectral reflectance of a planted subtropical coniferous forest from the top of a flux tower at Qianyanzhou Station, one of the ChinaFLUX sites, in September and December 2013, and simultaneously measured CO2 flux and meteorological variables for correlation and regression analysis. Results showed that PRI had a better correlation with LUE (R2 = 0.20, P< 0.001) than that of normalized difference vegetation index (NDVI), i.e., PRI was preferred in LUE retrieval. During the whole observation period, PRI and soil water content (SWC)-based bivariate regression model correlated well with LUE (R2 = 0.29, P < 0.001 and R2 = 0.30, P < 0.01 for daytime and midday observation, respectively), but in autumn the bivariate regression model of PRI and vapor pressure deficit (VPD) had a higher correlation with LUE (R2 = 0.448, P < 0.001) for midday observation, which showed that environmental factors, i.e., SWC and VPD, had a potential in improving the LUE retrieval from PRI, but the choice of appropriate environmental factors depended on season. PMID:26915199

  16. Efficient spectral broadening in the 100-W average power regime using gas-filled kagome HC-PCF and pulse compression.

    PubMed

    Emaury, Florian; Saraceno, Clara J; Debord, Benoit; Ghosh, Debashri; Diebold, Andreas; Gèrôme, Frederic; Südmeyer, Thomas; Benabid, Fetah; Keller, Ursula

    2014-12-15

    We present nonlinear pulse compression of a high-power SESAM-modelocked thin-disk laser (TDL) using an Ar-filled hypocycloid-core kagome hollow-core photonic crystal fiber (HC-PCF). The output of the modelocked Yb:YAG TDL with 127 W average power, a pulse repetition rate of 7 MHz, and a pulse duration of 740 fs was spectrally broadened 16-fold while propagating in a kagome HC-PCF containing 13 bar of static argon gas. Subsequent compression tests performed using 8.4% of the full available power resulted in a pulse duration as short as 88 fs using the spectrally broadened output from the fiber. Compressing the full transmitted power through the fiber (118 W) could lead to a compressed output of >100  W of average power and >100  MW of peak power with an average power compression efficiency of 88%. This simple laser system with only one ultrafast laser oscillator and a simple single-pass fiber pulse compressor, generating both high peak power >100  MW and sub-100-fs pulses at megahertz repetition rate, is very interesting for many applications such as high harmonic generation and attosecond science with improved signal-to-noise performance.

  17. Mesoscopic quantum emitters from deterministic aggregates of conjugated polymers

    PubMed Central

    Stangl, Thomas; Wilhelm, Philipp; Remmerssen, Klaas; Höger, Sigurd; Vogelsang, Jan; Lupton, John M.

    2015-01-01

    An appealing definition of the term “molecule” arises from consideration of the nature of fluorescence, with discrete molecular entities emitting a stream of single photons. We address the question of how large a molecular object may become by growing deterministic aggregates from single conjugated polymer chains. Even particles containing dozens of individual chains still behave as single quantum emitters due to efficient excitation energy transfer, whereas the brightness is raised due to the increased absorption cross-section of the suprastructure. Excitation energy can delocalize between individual polymer chromophores in these aggregates by both coherent and incoherent coupling, which are differentiated by their distinct spectroscopic fingerprints. Coherent coupling is identified by a 10-fold increase in excited-state lifetime and a corresponding spectral red shift. Exciton quenching due to incoherent FRET becomes more significant as aggregate size increases, resulting in single-aggregate emission characterized by strong blinking. This mesoscale approach allows us to identify intermolecular interactions which do not exist in isolated chains and are inaccessible in bulk films where they are present but masked by disorder. PMID:26417079

  18. Single-channel 1.92 Tbit/s, Pol-Mux-64 QAM coherent Nyquist pulse transmission over 150 km with a spectral efficiency of 7.5 bit/s/Hz.

    PubMed

    Otuya, David Odeke; Kasai, Keisuke; Yoshida, Masato; Hirooka, Toshihiko; Nakazawa, Masataka

    2014-10-01

    Coherent Nyquist pulses have been used for optical time division multiplexed (OTDM) digital coherent transmission, and a single-channel 1.92 Tbit/s, Pol-Mux-64 QAM coherent Nyquist pulse transmission over 150 km is demonstrated. The ability to considerably reduce the spectral bandwidth of the data signal enabled us to increase the spectral efficiency from 3.2 bit/s/Hz to 7.5 bit/s/Hz when using a Gaussian pulse train.

  19. Evaluation of water-use efficiency in foxtail millet (Setaria italica) using visible-near infrared and thermal spectral sensing techniques.

    PubMed

    Wang, Meng; Ellsworth, Patrick Z; Zhou, Jianfeng; Cousins, Asaph B; Sankaran, Sindhuja

    2016-05-15

    Water limitations decrease stomatal conductance (g(s)) and, in turn, photosynthetic rate (A(net)), resulting in decreased crop productivity. The current techniques for evaluating these physiological responses are limited to leaf-level measures acquired by measuring leaf-level gas exchange. In this regard, proximal sensing techniques can be a useful tool in studying plant biology as they can be used to acquire plant-level measures in a high-throughput manner. However, to confidently utilize the proximal sensing technique for high-throughput physiological monitoring, it is important to assess the relationship between plant physiological parameters and the sensor data. Therefore, in this study, the application of rapid sensing techniques based on thermal imaging and visual-near infrared spectroscopy for assessing water-use efficiency (WUE) in foxtail millet (Setaria italica (L.) P. Beauv) was evaluated. The visible-near infrared spectral reflectance (350-2500 nm) and thermal (7.5-14 µm) data were collected at regular intervals from well-watered and drought-stressed plants in combination with other leaf physiological parameters (transpiration rate-E, A(net), g(s), leaf carbon isotopic signature-δ(13)C(leaf), WUE). Partial least squares regression (PLSR) analysis was used to predict leaf physiological measures based on the spectral data. The PLSR modeling on the hyperspectral data yielded accurate and precise estimates of leaf E, gs, δ(13)C(leaf), and WUE with coefficient of determination in a range of 0.85-0.91. Additionally, significant differences in average leaf temperatures (~1°C) measured with a thermal camera were observed between well-watered plants and drought-stressed plants. In summary, the visible-near infrared reflectance data, and thermal images can be used as a potential rapid technique for evaluating plant physiological responses such as WUE. PMID:26992551

  20. Evaluation of water-use efficiency in foxtail millet (Setaria italica) using visible-near infrared and thermal spectral sensing techniques.

    PubMed

    Wang, Meng; Ellsworth, Patrick Z; Zhou, Jianfeng; Cousins, Asaph B; Sankaran, Sindhuja

    2016-05-15

    Water limitations decrease stomatal conductance (g(s)) and, in turn, photosynthetic rate (A(net)), resulting in decreased crop productivity. The current techniques for evaluating these physiological responses are limited to leaf-level measures acquired by measuring leaf-level gas exchange. In this regard, proximal sensing techniques can be a useful tool in studying plant biology as they can be used to acquire plant-level measures in a high-throughput manner. However, to confidently utilize the proximal sensing technique for high-throughput physiological monitoring, it is important to assess the relationship between plant physiological parameters and the sensor data. Therefore, in this study, the application of rapid sensing techniques based on thermal imaging and visual-near infrared spectroscopy for assessing water-use efficiency (WUE) in foxtail millet (Setaria italica (L.) P. Beauv) was evaluated. The visible-near infrared spectral reflectance (350-2500 nm) and thermal (7.5-14 µm) data were collected at regular intervals from well-watered and drought-stressed plants in combination with other leaf physiological parameters (transpiration rate-E, A(net), g(s), leaf carbon isotopic signature-δ(13)C(leaf), WUE). Partial least squares regression (PLSR) analysis was used to predict leaf physiological measures based on the spectral data. The PLSR modeling on the hyperspectral data yielded accurate and precise estimates of leaf E, gs, δ(13)C(leaf), and WUE with coefficient of determination in a range of 0.85-0.91. Additionally, significant differences in average leaf temperatures (~1°C) measured with a thermal camera were observed between well-watered plants and drought-stressed plants. In summary, the visible-near infrared reflectance data, and thermal images can be used as a potential rapid technique for evaluating plant physiological responses such as WUE.

  1. High throughput virtual screening and in silico ADMET analysis for rapid and efficient identification of potential PAP248-286 aggregation inhibitors as anti-HIV agents

    NASA Astrophysics Data System (ADS)

    Malik, Ruchi; Bunkar, Devendra; Choudhary, Bhanwar Singh; Srivastava, Shubham; Mehta, Pakhuri; Sharma, Manish

    2016-10-01

    Human semen is principal vehicle for transmission of HIV-1 and other enveloped viruses. Several endogenous peptides present in semen, including a 39-amino acid fragments of prostatic acid phosphatase (PAP248-286) assemble into amyloid fibrils named as semen-derived enhancer of viral infection (SEVI) that promote virion attachment to target cells which dramatically enhance HIV virus infection by up to 105-fold. Epigallocatechin-3-gallate (EGCG), a polyphenolic compound, is the major catechin found in green tea which disaggregates existing SEVI fibers, and inhibits the formation of SEVI fibers. The aim of this study was to screen a number of relevant polyphenols to develop a rational approach for designing PAP248-286 aggregation inhibitors as potential anti-HIV agents. The molecular docking based virtual screening results showed that polyphenolic compounds 2-6 possessed good docking score and interacted well with the active site residues of PAP248-286. Amino acid residues of binding site namely; Lys255, Ser256, Leu258 and Asn265 are involved in binding of these compounds. In silico ADMET prediction studies on these hits were also found to be promising. Polyphenolic compounds 2-6 identified as hits may act as novel leads for inhibiting aggregation of PAP248-286 into SEVI.

  2. Diffusion Limited Aggregation: Algorithm optimization revisited

    NASA Astrophysics Data System (ADS)

    Braga, F. L.; Ribeiro, M. S.

    2011-08-01

    The Diffusion Limited Aggregation (DLA) model developed by Witten and Sander in 1978 is useful in modeling a large class of growth phenomena with local dependence. Besides its simplicity this aggregation model has a complex behavior that can be observed at the patterns generated. We propose on this work a brief review of some important proprieties of this model and present an algorithm to simulate a DLA aggregates that simpler and efficient compared to others found in the literature.

  3. Portable, parallel 9-wavelength near-infrared spectral tomography (NIRST) system for efficient characterization of breast cancer within the clinical oncology infusion suite

    PubMed Central

    Zhao, Yan; Pogue, Brian W.; Haider, Steffen J.; Gui, Jiang; diFlorio-Alexander, Roberta M.; Paulsen, Keith D.; Jiang, Shudong

    2016-01-01

    A portable near-infrared spectral tomography (NIRST) system was developed with simultaneous frequency domain (FD) and continuous-wave (CW) optical measurements for efficient characterization of breast cancer in a clinical oncology setting. Simultaneous FD and CW recordings were implemented to speed up acquisition to 3 minutes for all 9 wavelengths, spanning a range from 661nm to 1064nm. An adjustable interface was designed to fit various breast sizes and shapes. Spatial images of oxy- and deoxy-hemoglobin, water, lipid, and scattering components were reconstructed using a 2D FEM approach. The system was tested on a group of 10 normal subjects, who were examined bilaterally and the recovered optical images were compared to radiographic breast density. Significantly higher total hemoglobin and water were estimated in the high density relative to low density groups. One patient with invasive ductal carcinoma was also examined and the cancer region was characterized as having a contrast ratio of 1.4 in total hemoglobin and 1.2 in water. PMID:27375937

  4. An efficient plane wave spectral analysis to predict the focal region fields of parabolic reflector antennas for small and wide angle scanning

    NASA Astrophysics Data System (ADS)

    Nagamune, Akio; Pathak, Prabhakar H.

    1990-11-01

    An efficient approach is described for calculating the field distribution in the focal region of an electrically large, symmetric or offset parabolic reflector antenna with an arbitrary rim contour, when the concave reflector surface is fully illuminated by an obliquely incident arbitrary electromagnetic plane wave. This solution is useful for synthesizing feed arrays in scanning multiple and contour beam reflector antennas via reciprocity. The dominant contribution to the focal-region fields is found by transforming the physical-optics integral over the reflector surface into a plane-wave spectral (PWS) integral. An important feature of the approach is that the spectrum (or the PWS integrand) is obtained in closed form containing relatively simple functions upon dividing the reflector surface into just a few sections that yield rectangular projected apertures. The PWS integral is evaluated rapidly via the fast Fourier transform (FFT) algorithm to furnish, in only a single computation, the field for every place in the focal plane (or any plane parallel to it) within the focal region for a given direction of the incident wave. The correction to the physical-optics field is relatively small in the focal region and may therefore be neglected. Numerical results based on this PWS approach are presented, and their accuracy is established by comparison with results based on other approaches.

  5. Efficient Spectral Diffusion at the Air/Water Interface Revealed by Femtosecond Time-Resolved Heterodyne-Detected Vibrational Sum Frequency Generation Spectroscopy.

    PubMed

    Inoue, Ken-Ichi; Ishiyama, Tatsuya; Nihonyanagi, Satoshi; Yamaguchi, Shoichi; Morita, Akihiro; Tahara, Tahei

    2016-05-19

    Femtosecond vibrational dynamics at the air/water interface is investigated by time-resolved heterodyne-detected vibrational sum frequency generation (TR-HD-VSFG) spectroscopy and molecular dynamics (MD) simulation. The low- and high-frequency sides of the hydrogen-bonded (HB) OH stretch band at the interface are selectively excited with special attention to the bandwidth and energy of the pump pulses. Narrow bleach is observed immediately after excitation of the high-frequency side of the HB OH band at ∼3500 cm(-1), compared to the broad bleach observed with excitation of the low-frequency side at ∼3300 cm(-1). However, the time-resolved spectra observed with the two different excitations become very similar at 0.5 ps and almost indistinguishable by 1.0 ps. This reveals that efficient spectral diffusion occurs regardless of the difference of the pump frequency. The experimental observations are well-reproduced by complementary MD simulation. There is no experimental and theoretical evidence that supports extraordinary slow dynamics in the high-frequency side of the HB OH band, which was reported before. PMID:27120559

  6. Spectroscopic characterization of phenazinium dye aggregates in water and acetonitrile media: effect of methyl substitution on the aggregation phenomenon.

    PubMed

    Sarkar, Deboleena; Das, Paramita; Girigoswami, Agnishwar; Chattopadhyay, Nitin

    2008-10-01

    Absorption, fluorescence, and fluorescence excitation spectral studies of two planar, cationic phenazinium dyes, namely, phenosafranin (PSF) and safranin-T (ST), have been performed in protic and aprotic polar solvents. The studies reveal the formation of both J- and H-aggregates in concentrated solutions. The planarity of the phenazinium skeleton and the presence of a positive charge are attributed to be the driving force for this aggregation behavior. The aggregates are established to be dimers only. The positive inductive effect of the methyl substituents in safranin-T augments the aggregation process. The experiments reveal that for both dyes, the polar protic solvent favors the aggregation process more than the aprotic solvent.

  7. Spectral and Spread Spectral Teleportation

    SciTech Connect

    Humble, Travis S

    2010-01-01

    We report how quantum information encoded into the spectral degree of freedom of a single-photon state is teleported using a finite spectrally entangled biphoton state. We further demonstrate how the bandwidth of a teleported waveform can be controllably and coherently dilated using a spread spectral variant of teleportation. We present analytical fidelities for spectral and spread spectral teleportation when complex-valued Gaussian states are prepared using a proposed experimental approach, and we discuss the utility of these techniques for integrating broad-bandwidth photonic qubits with narrow-bandwidth receivers in quantum communication systems.

  8. Thermophotovoltaic Spectral Control

    SciTech Connect

    DM DePoy; PM Fourspring; PF Baldasaro; JF Beausang; EJ Brown; MW Dashiel; KD Rahner; TD Rahmlow; JE Lazo-Wasem; EJ Gratrix; B Wemsman

    2004-06-09

    Spectral control is a key technology for thermophotovoltaic (TPV) direct energy conversion systems because only a fraction (typically less than 25%) of the incident thermal radiation has energy exceeding the diode bandgap energy, E{sub g}, and can thus be converted to electricity. The goal for TPV spectral control in most applications is twofold: (1) Maximize TPV efficiency by minimizing transfer of low energy, below bandgap photons from the radiator to the TPV diode. (2) Maximize TPV surface power density by maximizing transfer of high energy, above bandgap photons from the radiator to the TPV diode. TPV spectral control options include: front surface filters (e.g. interference filters, plasma filters, interference/plasma tandem filters, and frequency selective surfaces), back surface reflectors, and wavelength selective radiators. System analysis shows that spectral performance dominates diode performance in any practical TPV system, and that low bandgap diodes enable both higher efficiency and power density when spectral control limitations are considered. Lockheed Martin has focused its efforts on front surface tandem filters which have achieved spectral efficiencies of {approx}83% for E{sub g} = 0.52 eV and {approx}76% for E{sub g} = 0.60 eV for a 950 C radiator temperature.

  9. Magnetic Cross-Linked Enzyme Aggregates (mCLEAs) of Candida antarctica Lipase: An Efficient and Stable Biocatalyst for Biodiesel Synthesis

    PubMed Central

    Cruz-Izquierdo, Álvaro; Picó, Enrique A.; López, Carmen; Serra, Juan L.; Llama, María J.

    2014-01-01

    Enzyme-catalyzed production of biodiesel is the object of extensive research due to the global shortage of fossil fuels and increased environmental concerns. Herein we report the preparation and main characteristics of a novel biocatalyst consisting of Cross-Linked Enzyme Aggregates (CLEAs) of Candida antarctica lipase B (CALB) which are covalently bound to magnetic nanoparticles, and tackle its use for the synthesis of biodiesel from non-edible vegetable and waste frying oils. For this purpose, insolubilized CALB was covalently cross-linked to magnetic nanoparticles of magnetite which the surface was functionalized with –NH2 groups. The resulting biocatalyst combines the relevant catalytic properties of CLEAs (as great stability and feasibility for their reutilization) and the magnetic character, and thus the final product (mCLEAs) are superparamagnetic particles of a robust catalyst which is more stable than the free enzyme, easily recoverable from the reaction medium and reusable for new catalytic cycles. We have studied the main properties of this biocatalyst and we have assessed its utility to catalyze transesterification reactions to obtain biodiesel from non-edible vegetable oils including unrefined soybean, jatropha and cameline, as well as waste frying oil. Using 1% mCLEAs (w/w of oil) conversions near 80% were routinely obtained at 30°C after 24 h of reaction, this value rising to 92% after 72 h. Moreover, the magnetic biocatalyst can be easily recovered from the reaction mixture and reused for at least ten consecutive cycles of 24 h without apparent loss of activity. The obtained results suggest that mCLEAs prepared from CALB can become a powerful biocatalyst for application at industrial scale with better performance than those currently available. PMID:25551445

  10. Magnetic Cross-Linked Enzyme Aggregates (mCLEAs) of Candida antarctica lipase: an efficient and stable biocatalyst for biodiesel synthesis.

    PubMed

    Cruz-Izquierdo, Álvaro; Picó, Enrique A; López, Carmen; Serra, Juan L; Llama, María J

    2014-01-01

    Enzyme-catalyzed production of biodiesel is the object of extensive research due to the global shortage of fossil fuels and increased environmental concerns. Herein we report the preparation and main characteristics of a novel biocatalyst consisting of Cross-Linked Enzyme Aggregates (CLEAs) of Candida antarctica lipase B (CALB) which are covalently bound to magnetic nanoparticles, and tackle its use for the synthesis of biodiesel from non-edible vegetable and waste frying oils. For this purpose, insolubilized CALB was covalently cross-linked to magnetic nanoparticles of magnetite which the surface was functionalized with -NH2 groups. The resulting biocatalyst combines the relevant catalytic properties of CLEAs (as great stability and feasibility for their reutilization) and the magnetic character, and thus the final product (mCLEAs) are superparamagnetic particles of a robust catalyst which is more stable than the free enzyme, easily recoverable from the reaction medium and reusable for new catalytic cycles. We have studied the main properties of this biocatalyst and we have assessed its utility to catalyze transesterification reactions to obtain biodiesel from non-edible vegetable oils including unrefined soybean, jatropha and cameline, as well as waste frying oil. Using 1% mCLEAs (w/w of oil) conversions near 80% were routinely obtained at 30°C after 24 h of reaction, this value rising to 92% after 72 h. Moreover, the magnetic biocatalyst can be easily recovered from the reaction mixture and reused for at least ten consecutive cycles of 24 h without apparent loss of activity. The obtained results suggest that mCLEAs prepared from CALB can become a powerful biocatalyst for application at industrial scale with better performance than those currently available. PMID:25551445

  11. Magnetic Cross-Linked Enzyme Aggregates (mCLEAs) of Candida antarctica lipase: an efficient and stable biocatalyst for biodiesel synthesis.

    PubMed

    Cruz-Izquierdo, Álvaro; Picó, Enrique A; López, Carmen; Serra, Juan L; Llama, María J

    2014-01-01

    Enzyme-catalyzed production of biodiesel is the object of extensive research due to the global shortage of fossil fuels and increased environmental concerns. Herein we report the preparation and main characteristics of a novel biocatalyst consisting of Cross-Linked Enzyme Aggregates (CLEAs) of Candida antarctica lipase B (CALB) which are covalently bound to magnetic nanoparticles, and tackle its use for the synthesis of biodiesel from non-edible vegetable and waste frying oils. For this purpose, insolubilized CALB was covalently cross-linked to magnetic nanoparticles of magnetite which the surface was functionalized with -NH2 groups. The resulting biocatalyst combines the relevant catalytic properties of CLEAs (as great stability and feasibility for their reutilization) and the magnetic character, and thus the final product (mCLEAs) are superparamagnetic particles of a robust catalyst which is more stable than the free enzyme, easily recoverable from the reaction medium and reusable for new catalytic cycles. We have studied the main properties of this biocatalyst and we have assessed its utility to catalyze transesterification reactions to obtain biodiesel from non-edible vegetable oils including unrefined soybean, jatropha and cameline, as well as waste frying oil. Using 1% mCLEAs (w/w of oil) conversions near 80% were routinely obtained at 30°C after 24 h of reaction, this value rising to 92% after 72 h. Moreover, the magnetic biocatalyst can be easily recovered from the reaction mixture and reused for at least ten consecutive cycles of 24 h without apparent loss of activity. The obtained results suggest that mCLEAs prepared from CALB can become a powerful biocatalyst for application at industrial scale with better performance than those currently available.

  12. Atomic spectral methods for molecular electronic structure calculations.

    PubMed

    Langhoff, P W; Boatz, J A; Hinde, R J; Sheehy, J A

    2004-11-15

    Theoretical methods are reported for ab initio calculations of the adiabatic (Born-Oppenheimer) electronic wave functions and potential energy surfaces of molecules and other atomic aggregates. An outer product of complete sets of atomic eigenstates familiar from perturbation-theoretical treatments of long-range interactions is employed as a representational basis without prior enforcement of aggregate wave function antisymmetry. The nature and attributes of this atomic spectral-product basis are indicated, completeness proofs for representation of antisymmetric states provided, convergence of Schrodinger eigenstates in the basis established, and strategies for computational implemention of the theory described. A diabaticlike Hamiltonian matrix representative is obtained, which is additive in atomic-energy and pairwise-atomic interaction-energy matrices, providing a basis for molecular calculations in terms of the (Coulombic) interactions of the atomic constituents. The spectral-product basis is shown to contain the totally antisymmetric irreducible representation of the symmetric group of aggregate electron coordinate permutations once and only once, but to also span other (non-Pauli) symmetric group representations known to contain unphysical discrete states and associated continua in which the physically significant Schrodinger eigenstates are generally embedded. These unphysical representations are avoided by isolating the physical block of the Hamiltonian matrix with a unitary transformation obtained from the metric matrix of the explicitly antisymmetrized spectral-product basis. A formal proof of convergence is given in the limit of spectral closure to wave functions and energy surfaces obtained employing conventional prior antisymmetrization, but determined without repeated calculations of Hamiltonian matrix elements as integrals over explicitly antisymmetric aggregate basis states. Computational implementations of the theory employ efficient recursive

  13. Thermodynamics of Protein Aggregation

    NASA Astrophysics Data System (ADS)

    Osborne, Kenneth L.; Barz, Bogdan; Bachmann, Michael; Strodel, Birgit

    Amyloid protein aggregation characterizes many neurodegenerative disorders, including Alzheimer's, Parkinson's, and Creutz- feldt-Jakob disease. Evidence suggests that amyloid aggregates may share similar aggregation pathways, implying simulation of full-length amyloid proteins is not necessary for understanding amyloid formation. In this study we simulate GNNQQNY, the N-terminal prion-determining domain of the yeast protein Sup35 to investigate the thermodynamics of structural transitions during aggregation. We use a coarse-grained model with replica-exchange molecular dynamics to investigate the association of 3-, 6-, and 12-chain GNNQQNY systems and we determine the aggregation pathway by studying aggregation states of GN- NQQNY. We find that the aggregation of the hydrophilic GNNQQNY sequence is mainly driven by H-bond formation, leading to the formation of /3-sheets from the very beginning of the assembly process. Condensation (aggregation) and ordering take place simultaneously, which is underpinned by the occurrence of a single heat capacity peak only.

  14. Relating a Spectral Index from MODIS and Tower-based Measurements to Ecosystem Light Use Efficiency for a Fluxnet-Canada Coniferous Forest

    NASA Technical Reports Server (NTRS)

    Middleton, Elizabeth M.; Cheng, Yen-Ben; Hilker, Thomas; Huemmrich, Karl F.; Black, T. Andrew; Krishnan, Praveena; Coops, Nicholas C.

    2008-01-01

    As part of the North American Carbon Program effort to quantify the terrestrial carbon budget of North America, we have been examining the possibility of retrieving ecosystem light use efficiency (LUE, the carbon sequestered per unit photosynthetically active radiation) directly from satellite observations. Our novel approach has been to compare LUE derived from tower fluxes with LUE estimated using spectral indices computed from MODIS satellite observations over forests in the Fluxnet-Canada Research Network, using the MODIS narrow ocean bands acquired over land. We matched carbon flux data collected around the time of the MODIS mid-day overpass for over one hundred relatively clear days in five years (2001-2006) from a mature Douglas fir forest in British Columbia. We also examined hyperspectral reflectance data collected diurnally from the tower in conjunction with the eddy correlation fluxes and meteorological measurements made throughout the 2006 growing season at this site. The tower-based flux data provided an opportunity to examine diurnal and seasonal LUE processes and their relationship to spectral indices at the scale of the forest stand. We evaluated LUE in conjunction with the Photochemical Reflectance Index (PRI), a normalized difference spectral index that uses 531 nm and a reference band to capture responses to high light induced stress afforded by the xanthophyll cycle. Canopy structure information, retrieved from airborne laser scanning radar (LiDAR) observations, was used to partition the forest canopy into sunlit and shaded fractions throughout the day, on numerous days during 2006. At each observation period throughout a day, the PRI was examined for the sunlit, shaded, and intermediate canopy segments defined by their instantaneous position relative to the solar principal plane (SPP). The sunlit sector was associated with the illumination "hotspot" (the reflectance backscatter maximum), the shaded sector with the "cold or dark spot" (the

  15. Ion aggregation in high salt solutions. IV. Graph-theoretical analyses of ion aggregate structure and water hydrogen bonding network

    NASA Astrophysics Data System (ADS)

    Choi, Jun-Ho; Cho, Minhaeng

    2015-09-01

    Ions in high salt solutions form a variety of ion aggregates, from ion pairs to clusters and networks. Their influences on water hydrogen bonding (H-bonding) network structures have long been of great interest. Recently, we have shown that the morphological structures of ion aggregates can be analyzed by using a spectral graph analysis theory, where each ion cluster or ion network is represented by a properly defined graph with edges and vertices. Here, to further examine the network properties of ion aggregates and water H-bonding networks in high salt solutions, we consider a few representative graph-theoretical descriptors: clustering coefficient, minimum path length, global efficiency, and degree distribution of ion aggregates. From the molecular dynamics trajectories, these graph theoretical properties of ion aggregates and water structures in NaCl and kosmotropic solutions are calculated and shown to be strongly dependent on the two types of ion aggregate structures, i.e., ion cluster and ion network. Ion clusters in high NaCl solutions exhibit typical behaviors of scale free network. The corresponding graph theoretical properties of ion networks in high KSCN solutions are notably different from those of NaCl ion clusters and furthermore they are very similar to those of water hydrogen-bonding network. The present graph-theoretical analysis results indicate that the high solubility limits of KSCN and other ion-network-forming salts might originate from their ability to form a large scale morphological network that can be intertwined with co-existing water H-bonding network. Furthermore, it is shown that the graph-theoretical properties of water H-bonding network structures do not strongly depend on the nature of dissolved ions nor on the morphological structures of ion aggregates, indicating that water's H-bonding interaction and network-forming capability are highly robust. We anticipate that the present graph-theoretical analysis results of high salt

  16. Ion aggregation in high salt solutions. IV. Graph-theoretical analyses of ion aggregate structure and water hydrogen bonding network.

    PubMed

    Choi, Jun-Ho; Cho, Minhaeng

    2015-09-14

    Ions in high salt solutions form a variety of ion aggregates, from ion pairs to clusters and networks. Their influences on water hydrogen bonding (H-bonding) network structures have long been of great interest. Recently, we have shown that the morphological structures of ion aggregates can be analyzed by using a spectral graph analysis theory, where each ion cluster or ion network is represented by a properly defined graph with edges and vertices. Here, to further examine the network properties of ion aggregates and water H-bonding networks in high salt solutions, we consider a few representative graph-theoretical descriptors: clustering coefficient, minimum path length, global efficiency, and degree distribution of ion aggregates. From the molecular dynamics trajectories, these graph theoretical properties of ion aggregates and water structures in NaCl and kosmotropic solutions are calculated and shown to be strongly dependent on the two types of ion aggregate structures, i.e., ion cluster and ion network. Ion clusters in high NaCl solutions exhibit typical behaviors of scale free network. The corresponding graph theoretical properties of ion networks in high KSCN solutions are notably different from those of NaCl ion clusters and furthermore they are very similar to those of water hydrogen-bonding network. The present graph-theoretical analysis results indicate that the high solubility limits of KSCN and other ion-network-forming salts might originate from their ability to form a large scale morphological network that can be intertwined with co-existing water H-bonding network. Furthermore, it is shown that the graph-theoretical properties of water H-bonding network structures do not strongly depend on the nature of dissolved ions nor on the morphological structures of ion aggregates, indicating that water's H-bonding interaction and network-forming capability are highly robust. We anticipate that the present graph-theoretical analysis results of high salt

  17. Spectrally selective glazings

    SciTech Connect

    1998-08-01

    Spectrally selective glazing is window glass that permits some portions of the solar spectrum to enter a building while blocking others. This high-performance glazing admits as much daylight as possible while preventing transmission of as much solar heat as possible. By controlling solar heat gains in summer, preventing loss of interior heat in winter, and allowing occupants to reduce electric lighting use by making maximum use of daylight, spectrally selective glazing significantly reduces building energy consumption and peak demand. Because new spectrally selective glazings can have a virtually clear appearance, they admit more daylight and permit much brighter, more open views to the outside while still providing the solar control of the dark, reflective energy-efficient glass of the past. This Federal Technology Alert provides detailed information and procedures for Federal energy managers to consider spectrally selective glazings. The principle of spectrally selective glazings is explained. Benefits related to energy efficiency and other architectural criteria are delineated. Guidelines are provided for appropriate application of spectrally selective glazing, and step-by-step instructions are given for estimating energy savings. Case studies are also presented to illustrate actual costs and energy savings. Current manufacturers, technology users, and references for further reading are included for users who have questions not fully addressed here.

  18. spectral-cube: Read and analyze astrophysical spectral data cubes

    NASA Astrophysics Data System (ADS)

    Robitaille, Thomas; Ginsburg, Adam; Beaumont, Chris; Leroy, Adam; Rosolowsky, Erik

    2016-09-01

    Spectral-cube provides an easy way to read, manipulate, analyze, and write data cubes with two positional dimensions and one spectral dimension, optionally with Stokes parameters. It is a versatile data container for building custom analysis routines. It provides a uniform interface to spectral cubes, robust to the wide range of conventions of axis order, spatial projections, and spectral units that exist in the wild, and allows easy extraction of cube sub-regions using physical coordinates. It has the ability to create, combine, and apply masks to datasets and is designed to work with datasets too large to load into memory, and provide basic summary statistic methods like moments and array aggregates.

  19. Server-side Filtering and Aggregation within a Distributed Environment

    NASA Astrophysics Data System (ADS)

    Currey, J. C.; Bartle, A.

    2015-12-01

    Intercalibration, validation, and data mining use cases require more efficient access to the massive volumes of observation data distributed across multiple agency data centers. The traditional paradigm of downloading large volumes of data to a centralized server or desktop computer for analysis is no longer viable. More analysis should be performed within the host data centers using server-side functions. Many comparative analysis tasks require far less than 1% of the available observation data. The Multi-Instrument Intercalibration (MIIC) Framework provides web services to find, match, filter, and aggregate multi-instrument observation data. Matching measurements from separate spacecraft in time, location, wavelength, and viewing geometry is a difficult task especially when data are distributed across multiple agency data centers. Event prediction services identify near coincident measurements with matched viewing geometries near orbit crossings using complex orbit propagation and spherical geometry calculations. The number and duration of event opportunities depend on orbit inclinations, altitude differences, and requested viewing conditions (e.g., day/night). Event observation information is passed to remote server-side functions to retrieve matched data. Data may be gridded, spatially convolved onto instantaneous field-of-views, or spectrally resampled or convolved. Narrowband instruments are routinely compared to hyperspectal instruments such as AIRS and CRIS using relative spectral response (RSR) functions. Spectral convolution within server-side functions significantly reduces the amount of hyperspectral data needed by the client. This combination of intelligent selection and server-side processing significantly reduces network traffic and data to process on local servers. OPeNDAP is a mature networking middleware already deployed at many of the Earth science data centers. Custom OPeNDAP server-side functions that provide filtering, histogram analysis (1D

  20. Impact of Particle Aggregation on Nanoparticle Reactivity

    NASA Astrophysics Data System (ADS)

    Jassby, David

    2011-12-01

    The prevalence of nanoparticles in the environment is expected to grow in the coming years due to their increasing pervasiveness in consumer and industrial applications. Once released into the environment, nanoparticles encounter conditions of pH, salinity, UV light, and other solution conditions that may alter their surface characteristics and lead to aggregation. The unique properties that make nanoparticles desirable are a direct consequence of their size and increased surface area. Therefore, it is critical to recognize how aggregation alters the reactive properties of nanomaterials, if we wish to understand how these properties are going to behave once released into the environment. The size and structure of nanoparticle aggregates depend on surrounding conditions, including hydrodynamic ones. Depending on these conditions, aggregates can be large or small, tightly packed or loosely bound. Characterizing and measuring these changes to aggregate morphology is important to understanding the impact of aggregation on nanoparticle reactive properties. Examples of decreased reactivity due to aggregation include the case where tightly packed aggregates have fewer available surface sites compared to loosely packed ones; also, photocatalytic particles embedded in the center of large aggregates will experience less light when compared to particles embedded in small aggregates. However, aggregation also results in an increase in solid-solid interfaces between nanoparticles. This can result in increased energy transfer between neighboring particles, surface passivation, and altered surface tension. These phenomena can lead to an increase in reactivity. The goal of this thesis is to examine the impacts of aggregation on the reactivity of a select group of nanomaterials. Additionally, we examined how aggregation impacts the removal efficiency of fullerene nanoparticles using membrane filtration. The materials we selected to study include ZnS---a metal chalcogenide

  1. Environmentalism and natural aggregate mining

    USGS Publications Warehouse

    Drew, L.J.; Langer, W.H.; Sachs, J.S.

    2002-01-01

    living space has encroached on the sites of production; in other words, the act of production has engendered condemnation. Many other environmental problems that are associated with dust and noise and blasting from quarry and pit operations have been reduced through the efficient use of technology. Recycling concrete in buildings, bridges, and roads and asphaltic pavements will ultimately reduce the demand for virgin natural aggregate. The impact created by the large holes in the ground required for the mining of natural aggregate can be greatly reduced by planning their reclamation before mining begins. ?? 2002 International Association for Mathematical Geology.

  2. Aggregation of ice crystals in cirrus

    NASA Technical Reports Server (NTRS)

    Kajikawa, Masahiro; Heymsfield, Andrew J.

    1989-01-01

    Results are given from analysis of the aggregation of thick plate, columnar, and bullet rosette ice crystals in cirrus. Data were obtained from PMS 2D-C images, oil coated slides, and aircraft meteorological measurements. Crystal size ranged from 100 to 900 microns in temperatures from -30 to -45 C. The results indicate that the ratio of the sizes of aggregating crystals and the difference of their terminal velocities are important in aggregation. The collection efficiency was calculated for the thick plate crystals from the same data.

  3. Dynamics of spectral bio-indicators and their correlations with light use efficiency using directional observations at a Douglas-fir forest

    NASA Astrophysics Data System (ADS)

    Cheng, Yen-Ben; Middleton, Elizabeth M.; Hilker, Thomas; Coops, Nicholas C.; Black, T. Andrew; Krishnan, Praveena

    2009-09-01

    The carbon science community must rely on satellite remote sensing to obtain global estimates of photosynthetic activity, typically expressed as net primary production (NPP), gross primary production (GPP) or light use efficiency (LUE). The photochemical reflectance index (PRI), calculated as a normalized difference reflectance index using a physiologically active green band (~531 nm) and another physiologically insensitive green reference band (~570 nm), denoted as PRI(570), has been confirmed in many studies as being strongly related to LUE. Here, we examined the potential of utilizing PRI(570) observations under different illumination conditions for canopy LUE estimation of a forest. In order to evaluate this, directional hyperspectral reflectance measurements were collected continuously throughout the daytime periods using an automated spectroradiometer in conjunction with tower-based eddy covariance fluxes and environmental measurements at a coastal conifer forest in British Columbia, Canada throughout the 2006 growing season. A parameter calculated as the PRI(570) difference (dPRI(570)) between shaded versus sunlit canopy foliage sectors showed a strong correlation to tower-based LUE. The seasonal pattern for this correlation produced a dramatic change from high negative (r ~ -0.80) values in the springtime and early fall to high positive values (r ~ 0.80) during the summer months, which could represent the seasonality of physiological characteristics and environmental factors. Although the PRI(570) successfully tracked canopy LUE, one or both of its green bands (~531 and 570 nm) used to calculate the PRI are unavailable on most existing and planned near-term satellites. Therefore, we examined the potential to use 24 other spectral indexes for LUE monitoring that might be correlated to PRI, and thereby a substitute for it. We also continued our previous investigations into the influence of illumination conditions on the observed PRI(570) and other indexes

  4. ADE spectral networks

    NASA Astrophysics Data System (ADS)

    Longhi, Pietro; Park, Chan Y.

    2016-08-01

    We introduce a new perspective and a generalization of spectral networks for 4d {N} = 2 theories of class S associated to Lie algebras {g} = A n , D n , E6, and E7. Spectral networks directly compute the BPS spectra of 2d theories on surface defects coupled to the 4d theories. A Lie algebraic interpretation of these spectra emerges naturally from our construction, leading to a new description of 2d-4d wall-crossing phenomena. Our construction also provides an efficient framework for the study of BPS spectra of the 4d theories. In addition, we consider novel types of surface defects associated with minuscule ccrepresentations of {g}.

  5. Photovoltaic spectral responsivity measurements

    SciTech Connect

    Emery, K.; Dunlavy, D.; Field, H.; Moriarty, T.

    1998-09-01

    This paper discusses the various elemental random and nonrandom error sources in typical spectral responsivity measurement systems. The authors focus specifically on the filter and grating monochrometer-based spectral responsivity measurement systems used by the Photovoltaic (PV) performance characterization team at NREL. A variety of subtle measurement errors can occur that arise from a finite photo-current response time, bandwidth of the monochromatic light, waveform of the monochromatic light, and spatial uniformity of the monochromatic and bias lights; the errors depend on the light source, PV technology, and measurement system. The quantum efficiency can be a function of he voltage bias, light bias level, and, for some structures, the spectral content of the bias light or location on the PV device. This paper compares the advantages and problems associated with semiconductor-detector-based calibrations and pyroelectric-detector-based calibrations. Different current-to-voltage conversion and ac photo-current detection strategies employed at NREL are compared and contrasted.

  6. Aggregations in Flatworms.

    ERIC Educational Resources Information Center

    Liffen, C. L.; Hunter, M.

    1980-01-01

    Described is a school project to investigate aggregations in flatworms which may be influenced by light intensity, temperature, and some form of chemical stimulus released by already aggregating flatworms. Such investigations could be adopted to suit many educational levels of science laboratory activities. (DS)

  7. Morphological classification of nanoceramic aggregates

    NASA Astrophysics Data System (ADS)

    Crosta, Giovanni F.; Kang, Bongwoo; Ospina, Carolina; Sung, Changmo

    2005-01-01

    Aluminum silicate nanoaggregates grown at near-room temperature on an organic template under a variety of experimental conditions have been imaged by transmission electron microscopy. Images have been automatically classified by an algorithm based on "spectrum enhancement", multivariate statistics and supervised optimization. Spectrum enhancement consists of subtracting, in the log scale, a known function of wavenumber from the angle averaged power spectral density of the image. Enhanced spectra of each image, after polynomial interpolation, have been regarded as morphological descriptors and as such submitted to principal components analysis nested with a multiobjective parameter optimization algorithm. The latter has maximized pairwise discrimination between classes of materials. The role of the organic template and of a reaction parameter on aggregate morphology has been assessed at two magnification scales. Classification results have also been related to crystal structure data derived from selected area electron diffraction patterns.

  8. Energy challenges in optical access and aggregation networks.

    PubMed

    Kilper, Daniel C; Rastegarfar, Houman

    2016-03-01

    Scalability is a critical issue for access and aggregation networks as they must support the growth in both the size of data capacity demands and the multiplicity of access points. The number of connected devices, the Internet of Things, is growing to the tens of billions. Prevailing communication paradigms are reaching physical limitations that make continued growth problematic. Challenges are emerging in electronic and optical systems and energy increasingly plays a central role. With the spectral efficiency of optical systems approaching the Shannon limit, increasing parallelism is required to support higher capacities. For electronic systems, as the density and speed increases, the total system energy, thermal density and energy per bit are moving into regimes that become impractical to support-for example requiring single-chip processor powers above the 100 W limit common today. We examine communication network scaling and energy use from the Internet core down to the computer processor core and consider implications for optical networks. Optical switching in data centres is identified as a potential model from which scalable access and aggregation networks for the future Internet, with the application of integrated photonic devices and intelligent hybrid networking, will emerge. PMID:26809581

  9. Controlling Electronic Transitions in Fullerene van der Waals Aggregates via Supramolecular Assembly.

    PubMed

    Das, Saunak; Herrmann-Westendorf, Felix; Schacher, Felix H; Täuscher, Eric; Ritter, Uwe; Dietzek, Benjamin; Presselt, Martin

    2016-08-24

    Morphologies crucially determine the optoelectronic properties of organic semiconductors. Therefore, hierarchical and supramolecular approaches have been developed for targeted design of supramolecular ensembles of organic semiconducting molecules and performance improvement of, e.g., organic solar cells (OSCs), organic light emitting diodes (OLEDs), and organic field-effect transistors (OFETs). We demonstrate how the photonic properties of fullerenes change with the formation of van der Waals aggregates. We identified supramolecular structures with broadly tunable absorption in the visible spectral range and demonstrated how to form aggregates with targeted visible (vis) absorption. To control supramolecular structure formation, we functionalized the C60-backbone with polar (bis-polyethylene glycol malonate-MPEG) tails, thus yielding an amphiphilic fullerene derivative that self-assembles at interfaces. Aggregates of systematically tuned size were obtained from concentrating MPEGC60 in stearic acid matrices, while different supramolecular geometries were provoked via different thin film preparation methods, namely spin-casting and Langmuir-Blodgett (LB) deposition from an air-water interface. We demonstrated that differences in molecular orientation in LB films (C2v type point group aggregates) and spin-casting (stochastic aggregates) lead to huge changes in electronic absorption spectra due to symmetry and orientation reasons. These differences in the supramolecular structures, causing the different photonic properties of spin-cast and LB films, could be identified by means of quantum chemical calculations. Employing supramolecular assembly, we propounded that molecular symmetry in fullerene aggregates is extremely important in controlling vis absorption to harvest photons efficiently, when mixed with a donor molecule, thus improving active layer design and performance of OSCs. PMID:27482718

  10. Spectral Predictors

    SciTech Connect

    Ibarria, L; Lindstrom, P; Rossignac, J

    2006-11-17

    Many scientific, imaging, and geospatial applications produce large high-precision scalar fields sampled on a regular grid. Lossless compression of such data is commonly done using predictive coding, in which weighted combinations of previously coded samples known to both encoder and decoder are used to predict subsequent nearby samples. In hierarchical, incremental, or selective transmission, the spatial pattern of the known neighbors is often irregular and varies from one sample to the next, which precludes prediction based on a single stencil and fixed set of weights. To handle such situations and make the best use of available neighboring samples, we propose a local spectral predictor that offers optimal prediction by tailoring the weights to each configuration of known nearby samples. These weights may be precomputed and stored in a small lookup table. We show that predictive coding using our spectral predictor improves compression for various sources of high-precision data.

  11. Radio-astro-tools and spectral cube

    NASA Astrophysics Data System (ADS)

    Ginsburg, Adam

    2016-03-01

    SpectralCube is a toolkit for efficiently handling and performing simple analysis of spectral data cubes. It was designed for use with ALMA and JVLA data, but is readily and easily applicable to other data cubes including optical and infrared IFUs. This 5-minute "lightning talk" gives a brief overview and update of spectral_cube & the radio-astro-tools packages.

  12. Quicklime application instantly increases soil aggregate stability

    NASA Astrophysics Data System (ADS)

    Keiblinger, Katharina M.; Bauer, Lisa M.; Deltedesco, Evi; Holawe, Franz; Unterfrauner, Hans; Zehetner, Franz; Peticzka, Robert

    2016-01-01

    Agricultural intensification, especially enhanced mechanisation of soil management, can lead to the deterioration of soil structure and to compaction. A possible amelioration strategy is the application of (structural) lime. In this study, we tested the effect of two different liming materials, ie limestone (CaCO3) and quicklime (CaO), on soil aggregate stability in a 3-month greenhouse pot experiment with three agricultural soils. The liming materials were applied in the form of pulverised additives at a rate of 2 000 kg ha-1. Our results show a significant and instantaneous increase of stable aggregates after quicklime application whereas no effects were observed for limestone. Quicklime application seems to improve aggregate stability more efficiently in soils with high clay content and cation exchange capacity. In conclusion, quicklime application may be a feasible strategy for rapid improvement of aggregate stability of fine textured agricultural soils.

  13. Aggregate and the environment

    USGS Publications Warehouse

    Langer, William H.; Drew, Lawrence J.; Sachs, J.S.

    2004-01-01

    This book is designed to help you understand our aggregate resources-their importance, where they come from, how they are processed for our use, the environmental concerns related to their mining and processing, how those concerns are addressed, and the policies and regulations designed to safeguard workers, neighbors, and the environment from the negative impacts of aggregate mining. We hope this understanding will help prepare you to be involved in decisions that need to be made-individually and as a society-to be good stewards of our aggregate resources and our living planet.

  14. Protein Colloidal Aggregation Project

    NASA Technical Reports Server (NTRS)

    Oliva-Buisson, Yvette J. (Compiler)

    2014-01-01

    To investigate the pathways and kinetics of protein aggregation to allow accurate predictive modeling of the process and evaluation of potential inhibitors to prevalent diseases including cataract formation, chronic traumatic encephalopathy, Alzheimer's Disease, Parkinson's Disease and others.

  15. Cell aggregation and sedimentation.

    PubMed

    Davis, R H

    1995-01-01

    The aggregation of cells into clumps or flocs has been exploited for decades in such applications as biological wastewater treatment, beer brewing, antibiotic fermentation, and enhanced sedimentation to aid in cell recovery or retention. More recent research has included the use of cell aggregation and sedimentation to selectively separate subpopulations of cells. Potential biotechnological applications include overcoming contamination, maintaining plasmid-bearing cells in continuous fermentors, and selectively removing nonviable hybridoma cells from perfusion cultures.

  16. Automatic analysis of microscopic images of red blood cell aggregates

    NASA Astrophysics Data System (ADS)

    Menichini, Pablo A.; Larese, Mónica G.; Riquelme, Bibiana D.

    2015-06-01

    Red blood cell aggregation is one of the most important factors in blood viscosity at stasis or at very low rates of flow. The basic structure of aggregates is a linear array of cell commonly termed as rouleaux. Enhanced or abnormal aggregation is seen in clinical conditions, such as diabetes and hypertension, producing alterations in the microcirculation, some of which can be analyzed through the characterization of aggregated cells. Frequently, image processing and analysis for the characterization of RBC aggregation were done manually or semi-automatically using interactive tools. We propose a system that processes images of RBC aggregation and automatically obtains the characterization and quantification of the different types of RBC aggregates. Present technique could be interesting to perform the adaptation as a routine used in hemorheological and Clinical Biochemistry Laboratories because this automatic method is rapid, efficient and economical, and at the same time independent of the user performing the analysis (repeatability of the analysis).

  17. Signal-signal beat interference cancellation in spectrally-efficient WDM direct-detection Nyquist-pulse-shaped 16-QAM subcarrier modulation.

    PubMed

    Li, Zhe; Erkılınç, M Sezer; Pachnicke, Stephan; Griesser, Helmut; Bouziane, Rachid; Thomsen, Benn C; Bayvel, Polina; Killey, Robert I

    2015-09-01

    An experimental demonstration of direct-detection single-sideband Nyquist-pulse-shaped 16-QAM subcarrier modulated (Nyquist-SCM) transmission implementing a receiver-based signal-signal beat interference (SSBI) cancellation technique is described. The performance improvement with SSBI mitigation, which compensates for the nonlinear distortion caused by square-law detection, was quantified by simulations and experiments for a 7 × 25 Gb/s WDM Nyquist-SCM signal with a net optical information spectral density (ISD) of 2.0 (b/s)/Hz. A reduction of 3.6 dB in the back-to-back required OSNR at the HD-FEC threshold was achieved. The resulting reductions in BER in single channel and WDM transmission over distances of up to 800 km of uncompensated standard single-mode fiber (SSMF) achieved are presented.

  18. Smoothed aggregation adaptive spectral element-based algebraic multigrid

    SciTech Connect

    2015-01-20

    SAAMGE provides parallel methods for building multilevel hierarchies and solvers that can be used for elliptic equations with highly heterogeneous coefficients. Additionally, hierarchy adaptation is implemented allowing solving multiple problems with close coefficients without rebuilding the hierarchy.

  19. Fibronectin Aggregation and Assembly

    PubMed Central

    Ohashi, Tomoo; Erickson, Harold P.

    2011-01-01

    The mechanism of fibronectin (FN) assembly and the self-association sites are still unclear and contradictory, although the N-terminal 70-kDa region (I1–9) is commonly accepted as one of the assembly sites. We previously found that I1–9 binds to superfibronectin, which is an artificial FN aggregate induced by anastellin. In the present study, we found that I1–9 bound to the aggregate formed by anastellin and a small FN fragment, III1–2. An engineered disulfide bond in III2, which stabilizes folding, inhibited aggregation, but a disulfide bond in III1 did not. A gelatin precipitation assay showed that I1–9 did not interact with anastellin, III1, III2, III1–2, or several III1–2 mutants including III1–2KADA. (In contrast to previous studies, we found that the III1–2KADA mutant was identical in conformation to wild-type III1–2.) Because I1–9 only bound to the aggregate and the unfolding of III2 played a role in aggregation, we generated a III2 domain that was destabilized by deletion of the G strand. This mutant bound I1–9 as shown by the gelatin precipitation assay and fluorescence resonance energy transfer analysis, and it inhibited FN matrix assembly when added to cell culture. Next, we introduced disulfide mutations into full-length FN. Three disulfide locks in III2, III3, and III11 were required to dramatically reduce anastellin-induced aggregation. When we tested the disulfide mutants in cell culture, only the disulfide bond in III2 reduced the FN matrix. These results suggest that the unfolding of III2 is one of the key factors for FN aggregation and assembly. PMID:21949131

  20. An efficient one pot syntheses of aryl-3,3'-bis(indolyl)methanes and studies on their spectral characteristics, DPPH radical scavenging-, antimicrobial-, cytotoxicity-, and antituberculosis activity

    NASA Astrophysics Data System (ADS)

    Suresh Kumar, G. S.; Kumaresan, S.; Antony Muthu Prabhu, A.; Bhuvanesh, N.; Seethalakshmi, P. G.

    2013-01-01

    An efficient one-pot syntheses of aryl-3,3'-bis(indolyl)methanes (BIMs) from indole/2-methylindole and formylphenoxyaliphatic acid(s) is described. Esterification of carboxylic acid and aromatic electrophilic substitution reactions are achieved simultaneous in the presence of potash alum as a catalyst. This catalyst could be recovered and reused without substantial loss in its catalytic activity and the methodology could be applied on a range of closely related substrates. The solvation characteristics in ground and excited states of the compounds by monitoring the absorbance and fluorescence band maxima have been studied. The fluorescence studies in protic and aprotic solvents were rationalized on the basis of solute-solvent interaction and substituents effect on these photophysical processes analyzed. The compounds prepared showed efficient antimicrobial effect against human pathogens, cytotoxicity against A431 cell line, and DPPH radical scavenging effect. Single crystal XRD studies have been carried out for a few compounds synthesized in this work.

  1. Technology meets aggregate

    SciTech Connect

    Wilson, C.; Swan, C.

    2007-07-01

    New technology carried out at Tufts University and the University of Massachusetts on synthetic lightweight aggregate has created material from various qualities of fly ash from coal-fired power plants for use in different engineered applications. In pilot scale manufacturing tests an 'SLA' containing 80% fly ash and 20% mixed plastic waste from packaging was produced by 'dry blending' mixed plastic with high carbon fly ash. A trial run was completed to produce concrete masonry unit (CMU) blocks at a full-scale facility. It has been shown that SLA can be used as a partial substitution of a traditional stone aggregate in hot asphalt mix. 1 fig., 2 photos.

  2. A comparison of thermal zone aggregation methods

    SciTech Connect

    Dobbs, Justin R.; Hencey, Brandon M.

    2012-12-10

    The impact of increasing energy prices on building operation budgets has fueled demand for more energy-efficient structures. Existing building energy simulation tools generate an immense amount of data yet comparatively little knowledge. This paper introduces a framework that allows aggregation-based model reduction to operate on geometric building information models. The resulting aggregation sequence provides designers with faster simulations and affords insight into complex multi-scale thermal interactions. A comparison of the trade-off between simulation speed and accuracy for three hierarchical cluster partitioning methods concludes the discussion.

  3. Effects of quantum well growth temperature on the recombination efficiency of InGaN/GaN multiple quantum wells that emit in the green and blue spectral regions

    SciTech Connect

    Hammersley, S.; Dawson, P.; Kappers, M. J.; Massabuau, F. C.-P.; Sahonta, S.-L.; Oliver, R. A.; Humphreys, C. J.

    2015-09-28

    InGaN-based light emitting diodes and multiple quantum wells designed to emit in the green spectral region exhibit, in general, lower internal quantum efficiencies than their blue-emitting counter parts, a phenomenon referred to as the “green gap.” One of the main differences between green-emitting and blue-emitting samples is that the quantum well growth temperature is lower for structures designed to emit at longer wavelengths, in order to reduce the effects of In desorption. In this paper, we report on the impact of the quantum well growth temperature on the optical properties of InGaN/GaN multiple quantum wells designed to emit at 460 nm and 530 nm. It was found that for both sets of samples increasing the temperature at which the InGaN quantum well was grown, while maintaining the same indium composition, led to an increase in the internal quantum efficiency measured at 300 K. These increases in internal quantum efficiency are shown to be due reductions in the non-radiative recombination rate which we attribute to reductions in point defect incorporation.

  4. Experimental demonstration of real-time adaptively modulated DDO-OFDM systems with a high spectral efficiency up to 5.76bit/s/Hz transmission over SMF links.

    PubMed

    Chen, Ming; He, Jing; Tang, Jin; Wu, Xian; Chen, Lin

    2014-07-28

    In this paper, a FPGAs-based real-time adaptively modulated 256/64/16QAM-encoded base-band OFDM transceiver with a high spectral efficiency up to 5.76bit/s/Hz is successfully developed, and experimentally demonstrated in a simple intensity-modulated direct-detection optical communication system. Experimental results show that it is feasible to transmit a raw signal bit rate of 7.19Gbps adaptively modulated real-time optical OFDM signal over 20km and 50km single mode fibers (SMFs). The performance comparison between real-time and off-line digital signal processing is performed, and the results show that there is a negligible power penalty. In addition, to obtain the best transmission performance, direct-current (DC) bias voltage for MZM and launch power into optical fiber links are explored in the real-time optical OFDM systems.

  5. Aggregates, broccoli and cauliflower

    NASA Astrophysics Data System (ADS)

    Grey, Francois; Kjems, Jørgen K.

    1989-09-01

    Naturally grown structures with fractal characters like broccoli and cauliflower are discussed and compared with DLA-type aggregates. It is suggested that the branching density can be used to characterize the growth process and an experimental method to determine this parameter is proposed.

  6. Theoretical studies on light emission characteristics of high-efficiency BInGaN/GaN quantum well structures with blue spectral range

    NASA Astrophysics Data System (ADS)

    Park, Seoung-Hwan; Ahn, Doyeol

    2016-08-01

    Light emission characteristics of blue BxInyGa1-x-y N/GaN quantum well (QW) structures were using the multiband effective-mass theory. The In composition (y) to give the transition wavelength of 440 nm is reduced with the inclusion of the B composition (x). We find that the spontaneous emission peak rapidly increases with increasing x. In particular, the peak intensity of the BInGaN/GaN QW structure with x = 0.18 and y = 0.008 is about twice larger than that of the conventional InGaN/GaN QW structure. This can be explained by the fact that the internal field (-0.40 MV/cm) in the BInGaN well is In greatly reduced, compared to that (-1.04 MV/cm) in the conventional InGaN well. Also, the strain (-1.7%) in the BInGaN well is shown to be reduced slightly, compare to that (-2.0%) in InGaN well. Hence, we expect that BInGaN/GaN QW structures with a reduced strain can be used as a light source with a high efficiency.

  7. Spectral analysis of the efficiency of vertical mixing in the deep ocean due to interaction of tidal currents with a ridge running down a continental slope

    SciTech Connect

    Ibragimov, Ranis N.; Tartakovsky, Alexandre M.

    2014-10-29

    Efficiency of mixing, resulting from the reflection of an internal wave field imposed on the oscillatory background flow with a three-dimensional bottom topography, is investigated using a linear approximation. The radiating wave field is associated with the spectrum of the linear model, which consists of those mode numbers n and slope values α, for which the solution represents the internal waves of frequencies ω = nω0 radiating upwrad of the topography, where ω0 is the fundamental frequency at which internal waves are generated at the topography. The effects of the bottom topography and the earth’s rotation on the spectrum is analyzed analytically and numerically in the vicinity of the critical slope, which is a slope with the same angle to the horizontal as the internal wave characteristic. In this notation, θ is latitude, f is the Coriolis parameter and N is the buoyancy frequency, which is assumed to be a constant, which corresponds to the uniform stratification.

  8. Aggregate Remote Memory Copy Interface

    2006-02-23

    The purpose of the Aggregate Remote Memory Copy (ARMCI) library is to provide a general- purpose, efficient, and Widely portable remote memory access (RMA) operations (one-sided communication) optimized for Contiguous and noncontiguous (strided, scatter/gather, I/O vector) data transfers. In addition, ARMCI includes a set of atomic and mutual exclusion operations. The development ARMCI is driven by the need to support the global-addres space communication model in context of distributed regular or irregular distributed data structures,more » communication libraries, and compilers. ARMCI is a standalone system that could be used to support user-level libraries and applications that use MPI or PVM.« less

  9. Fluorescent aggregates Cyan 40 and Thiazole Orange dyes in solution

    NASA Astrophysics Data System (ADS)

    Nizomov, Negmat; Kurtaliev, Eldar N.; Rahimov, Sherzod I.

    2012-12-01

    Absorption and fluorescence electronic spectra of cyanine dyes Cyan 40 and Thiazole Orange (TO) in water and in binary mixtures: water + ethanol, water + DMF, water + dioxane and chloroform + hexane were studied. It was revealed, that increase of concentration of Cyan 40 and TO dyes in water and chloroform + hexane binary mixture promotes the formation of fluorescent H-aggregates. Meanwhile, in contrary to the well-known fluorescent aggregates, electronic absorption band of aggregated molecules is shifted to the shorter wavelengths and fluorescence band is shifted to the longer wavelengths relative to the bands of the monomer molecules. Observed spectral changes are explained on the basis of Davidov's theory of molecular excitons as splitting of the electron-excited states due to the aggregation of dye molecules.

  10. Spherical TiO2 aggregates with different building units for dye-sensitized solar cells.

    PubMed

    Liu, Zhaohui; Su, Xunjia; Hou, Genliang; Bi, Song; Xiao, Zhou; Jia, Haipeng

    2013-09-01

    Tailoring the architectures of spherical TiO2 aggregates is crucial to obtain superior photovoltaic properties and promote their application in dye-sensitized solar cells (DSSCs). Herein, we synthesized spherical TiO2 aggregates using different building units, including nanocrystallites, nanorods, nanosheets, and nanotubes, via a hydrothermal method, and studied the effect of the building units on the performances of DSSCs. The aggregates assembled by uniform nanosheet and nanotube building units were synthesized with the use of spherical TiO2 nanorod aggregates as titanium sources in an alkaline hydrothermal reaction. Compared with TiO2 nanoparticles, the spherical TiO2 aggregates possess higher surface area, more efficient light scattering ability, and better electron transport properties. Among the four types of spherical TiO2 aggregates; the nanorod, nanotube, and nanosheet aggregates demonstrate better electron transport properties than the nanocrystallite aggregates; the nanotube and nanosheet aggregates exhibit more efficient light scattering than the nanocrystallite and nanorod aggregates; and the nanotube aggregates show the highest surface area. Thus the DSSC based on nanotube aggregates exhibited the highest energy conversion efficiency of 7.48%, which is 16.0%, 9.7%, and 19.5% higher than those of the DSSCs based on the nanosheet, nanorod, and nanocrystallite aggregates, respectively.

  11. Proteins aggregation and human diseases

    NASA Astrophysics Data System (ADS)

    Hu, Chin-Kun

    2015-04-01

    Many human diseases and the death of most supercentenarians are related to protein aggregation. Neurodegenerative diseases include Alzheimer's disease (AD), Huntington's disease (HD), Parkinson's disease (PD), frontotemporallobar degeneration, etc. Such diseases are due to progressive loss of structure or function of neurons caused by protein aggregation. For example, AD is considered to be related to aggregation of Aβ40 (peptide with 40 amino acids) and Aβ42 (peptide with 42 amino acids) and HD is considered to be related to aggregation of polyQ (polyglutamine) peptides. In this paper, we briefly review our recent discovery of key factors for protein aggregation. We used a lattice model to study the aggregation rates of proteins and found that the probability for a protein sequence to appear in the conformation of the aggregated state can be used to determine the temperature at which proteins can aggregate most quickly. We used molecular dynamics and simple models of polymer chains to study relaxation and aggregation of proteins under various conditions and found that when the bending-angle dependent and torsion-angle dependent interactions are zero or very small, then protein chains tend to aggregate at lower temperatures. All atom models were used to identify a key peptide chain for the aggregation of insulin chains and to find that two polyQ chains prefer anti-parallel conformation. It is pointed out that in many cases, protein aggregation does not result from protein mis-folding. A potential drug from Chinese medicine was found for Alzheimer's disease.

  12. Revealing different aggregation pathways of amyloidogenic proteins by ultrasound velocimetry.

    PubMed

    Smirnovas, Vytautas; Winter, Roland

    2008-04-15

    In this work, we performed a detailed thermodynamic study, including ultrasound velocimetry, densimetry, calorimetry, and FTIR spectroscopy, of an aggregation-prone protein (insulin) under different salt-screening conditions to gain a deeper insight into the scenario of physicochemical events during its temperature-induced unfolding and aggregation reactions. Differences in aggregation and fibrillization pathways are reflected in changes of the partial molar volume, the coefficients of thermal expansion and compressibility, and the infrared spectral properties of the protein. Combining all experimental data allows setting up a scheme for the temperature-dependent insulin aggregation reaction in the presence and absence of NaCl. As revealed by complementary atomic force microscopy studies, under charge-screening conditions, a process involving structural reorganization, ripening, and formation of more compact nuclei from amorphous oligomers is involved in the formation of mature fibrillar morphologies. In this work, our focus was to put forward a comprehensive discussion of the use of ultrasound velocimetry in disentangling different aggregation pathways. In fact, ultrasound velocimetry proved to be very sensitive to changes in aggregation pathway, highlighting the importance of density and compressibility changes in the different aggregation and fibrillization reactions of the protein.

  13. Spectral and spread-spectral teleportation

    SciTech Connect

    Humble, Travis S.

    2010-06-15

    We report how quantum information encoded into the spectral degree of freedom of a single-photon state may be teleported using a finite spectrally entangled biphoton state. We further demonstrate how the bandwidth of the teleported wave form can be controllably and coherently dilated using a spread-spectral variant of teleportation. We calculate analytical expressions for the fidelities of spectral and spread-spectral teleportation when complex-valued Gaussian states are transferred using a proposed experimental approach. Finally, we discuss the utility of these techniques for integrating broad-bandwidth photonic qubits with narrow-bandwidth receivers in quantum communication systems.

  14. Dynamics of fire ant aggregations

    NASA Astrophysics Data System (ADS)

    Tennenbaum, Michael; Hu, David; Fernandez-Nieves, Alberto

    Fire ant aggregations are an inherently active system. Each ant harvests its own energy and can convert it into motion. The motion of individual ants contributes non-trivially to the bulk material properties of the aggregation. We have measured some of these properties using plate-plate rheology, where the response to an applied external force or deformation is measured. In this talk, we will present data pertaining to the aggregation behavior in the absence of any external force. We quantify the aggregation dynamics by monitoring the rotation of the top plate and by measuring the normal force. We then compare the results with visualizations of 2D aggregations.

  15. Relaxation schemes for Chebyshev spectral multigrid methods

    NASA Technical Reports Server (NTRS)

    Kang, Yimin; Fulton, Scott R.

    1993-01-01

    Two relaxation schemes for Chebyshev spectral multigrid methods are presented for elliptic equations with Dirichlet boundary conditions. The first scheme is a pointwise-preconditioned Richardson relaxation scheme and the second is a line relaxation scheme. The line relaxation scheme provides an efficient and relatively simple approach for solving two-dimensional spectral equations. Numerical examples and comparisons with other methods are given.

  16. Spectral methods for problems in complex geometries

    NASA Technical Reports Server (NTRS)

    Orszag, S. A.

    1979-01-01

    Techniques that permit the efficient application of spectral methods to solve problems in nearly arbitrary geometries are presented. These methods were found to be viable alternatives to finite difference and finite element processes. The spectral methods applied are extensions of the standard techniques of separation of variables to the solution of arbitrarily complicated problems.

  17. SPECTRAL ANALYSIS OF RADIOXENON

    SciTech Connect

    Cooper, Matthew W.; Bowyer, Ted W.; Hayes, James C.; Heimbigner, Tom R.; Hubbard, Charles W.; McIntyre, Justin I.; Schrom, Brian T.

    2008-09-23

    Monitoring changes in atmospheric radioxenon concentrations is a major tool in the detection of an underground nuclear explosion. Ground based systems like the Automated Radioxenon Sampler /Analyzer (ARSA), the Swedish Unattended Noble gas Analyzer (SAUNA) and the Automatic portable radiometer of isotopes Xe (ARIX), can collect and detect several radioxenon isotopes by processing and transferring samples into a high efficiency beta-gamma coincidence detector. The high efficiency beta-gamma coincidence detector makes these systems highly sensitive to the radioxenon isotopes 133Xe, 131mXe, 133mXe and 135Xe. The standard analysis uses regions of interest (ROI) to determine the amount of a particular radioxenon isotope present. The ROI method relies on the peaks of interest falling within energy limits of the ROI. Some potential problems inherent in this method are the reliance on stable detector gains and a fixed resolution for each energy peak. In addition, when a high activity sample is measured there will be more interference among the ROI, in particular within the 133Xe, 133mXe, and 131mXe regions. A solution to some of these problems can be obtained through spectral fitting of the data. Spectral fitting is simply the fitting of the peaks using known functions to determine the number and relative peak positions and widths. By knowing this information it is possible to determine which isotopes are present. Area under each peak can then be used to determine an overall concentration for each isotope. Using the areas of the peaks several key detector characteristics can be determined: efficiency, energy calibration, energy resolution and ratios between interfering isotopes (Radon daughters).

  18. Kinetics of protein aggregation

    NASA Astrophysics Data System (ADS)

    Knowles, Tuomas

    2015-03-01

    Aggregation into linear nanostructures, notably amyloid and amyloid-like fibrils, is a common form of behaviour exhibited by a range of peptides and proteins. This process was initially discovered in the context of the aetiology of a range of neurodegenerative diseases, but has recently been recognised to of general significance and has been found at the origin of a number of beneficial functional roles in nature, including as catalytic scaffolds and functional components in biofilms. This talk discusses our ongoing efforts to study the kinetics of linear protein self-assembly by using master equation approaches combined with global analysis of experimental data.

  19. Structure of Viral Aggregates

    NASA Astrophysics Data System (ADS)

    Barr, Stephen; Luijten, Erik

    2010-03-01

    The aggregation of virus particles is a particular form of colloidal self-assembly, since viruses of a give type are monodisperse and have identical, anisotropic surface charge distributions. In small-angle X-ray scattering experiments, the Qbeta virus was found to organize in different crystal structures in the presence of divalent salt and non-adsorbing polymer. Since a simple isotropic potential cannot explain the occurrence of all observed phases, we employ computer simulations to investigate how the surface charge distribution affects the virus interactions. Using a detailed model of the virus particle, we find an asymmetric ion distribution around the virus which gives rise to the different phases observed.

  20. Aggregation of PEGylated liposomes driven by hydrophobic forces.

    PubMed

    Bozó, Tamás; Mészáros, Tamás; Mihály, Judith; Bóta, Attila; Kellermayer, Miklós S Z; Szebeni, János; Kálmán, Benedek

    2016-11-01

    Polyethylene glycol (PEG) is widely used to sterically stabilize liposomes and improve the pharmacokinetic profile of drugs, peptides and nanoparticles. Here we report that ammonium sulfate (AS) can evoke the aggregation of PEGylated vesicles in a concentration-dependent manner. Liposomes with 5mol% PEG were colloidally stable at AS concentrations up to 0.7mM, above which they precipitated and formed micron-size aggregates with irregular shape. While aggregation was reversible up to 0.9M of AS, above 1M fusion occurred, which irreversibly distorted the size distribution. Zeta potential of liposomes markedly increased from -71±2.5mV to 2±0.5mV upon raising the AS concentration from 0 to 0.1M, but no considerable increase was seen during further AS addition, showing that the aggregation is independent of surface charge. There was no aggregation in the absence of the PEG chains, and increasing PEG molar% shifted the aggregation threshold to lower AS concentrations. Changes in the FTIR spectral features of PEGylated vesicles suggest that AS dehydrates PEG chains. Other kosmotropic salts also led to aggregation, while chaotropic salts did not, which indicates a general kosmotropic phenomenon. The driving force behind aggregation is likely to be the hydrophobic effect due to salting out the polymer similarly to what happens during protein purification or Hydrophobic Interaction Chromatography. Since liposome aggregation and fusion may result in difficulties during formulation and adverse reaction upon application, the phenomena detailed in this paper may have both technological and therapeutical consequences.

  1. Aggregation of PEGylated liposomes driven by hydrophobic forces.

    PubMed

    Bozó, Tamás; Mészáros, Tamás; Mihály, Judith; Bóta, Attila; Kellermayer, Miklós S Z; Szebeni, János; Kálmán, Benedek

    2016-11-01

    Polyethylene glycol (PEG) is widely used to sterically stabilize liposomes and improve the pharmacokinetic profile of drugs, peptides and nanoparticles. Here we report that ammonium sulfate (AS) can evoke the aggregation of PEGylated vesicles in a concentration-dependent manner. Liposomes with 5mol% PEG were colloidally stable at AS concentrations up to 0.7mM, above which they precipitated and formed micron-size aggregates with irregular shape. While aggregation was reversible up to 0.9M of AS, above 1M fusion occurred, which irreversibly distorted the size distribution. Zeta potential of liposomes markedly increased from -71±2.5mV to 2±0.5mV upon raising the AS concentration from 0 to 0.1M, but no considerable increase was seen during further AS addition, showing that the aggregation is independent of surface charge. There was no aggregation in the absence of the PEG chains, and increasing PEG molar% shifted the aggregation threshold to lower AS concentrations. Changes in the FTIR spectral features of PEGylated vesicles suggest that AS dehydrates PEG chains. Other kosmotropic salts also led to aggregation, while chaotropic salts did not, which indicates a general kosmotropic phenomenon. The driving force behind aggregation is likely to be the hydrophobic effect due to salting out the polymer similarly to what happens during protein purification or Hydrophobic Interaction Chromatography. Since liposome aggregation and fusion may result in difficulties during formulation and adverse reaction upon application, the phenomena detailed in this paper may have both technological and therapeutical consequences. PMID:27588427

  2. Spectral procedures for estimating crop biomass

    SciTech Connect

    Wanjura, D.F.; Hatfield, J.L.

    1985-05-01

    Spectral reflectance was measured semi-weekly and used to estimate leaf area and plant dry weight accumulation in cotton, soybeans, and sunflower. Integration of spectral crop growth cycle curves explained up to 95 and 91%, respectively, of the variation in cotton lint yield and dry weight. A theoretical relationship for dry weight accumulation, in which only intercepted radiation or intercepted radiation and solar energy to biomass conversion efficiency were spectrally estimated, explained 99 and 96%, respectively, of the observed plant dry weight variation of the three crops. These results demonstrate the feasibility of predicting crop biomass from spectral measurements collected frequently during the growing season. 15 references.

  3. Taurine and platelet aggregation

    SciTech Connect

    Nauss-Karol, C.; VanderWende, C.; Gaut, Z.N.

    1986-03-01

    Taurine is a putative neurotransmitter or neuromodulator. The endogenous taurine concentration in human platelets, determined by amino acid analysis, is 15 ..mu..M/g. In spite of this high level, taurine is actively accumulated. Uptake is saturable, Na/sup +/ and temperature dependent, and suppressed by metabolic inhibitors, structural analogues, and several classes of centrally active substances. High, medium and low affinity transport processes have been characterized, and the platelet may represent a model system for taurine transport in the CNS. When platelets were incubated with /sup 14/C-taurine for 30 minutes, then resuspended in fresh medium and reincubated for one hour, essentially all of the taurine was retained within the cells. Taurine, at concentrations ranging from 10-1000 ..mu..M, had no effect on platelet aggregation induced by ADP or epinephrine. However, taurine may have a role in platelet aggregation since 35-39% of the taurine taken up by human platelets appears to be secreted during the release reaction induced by low concentrations of either epinephrine or ADP, respectively. This release phenomenon would imply that part of the taurine taken up is stored directly in the dense bodies of the platelet.

  4. Real-time demonstration of 128-QAM-encoded optical OFDM transmission with a 5.25bit/s/Hz spectral efficiency in simple IMDD systems utilizing directly modulated DFB lasers.

    PubMed

    Jin, X Q; Giddings, R P; Hugues-Salas, E; Tang, J M

    2009-10-26

    The feasibility of implementing 128-QAM in off-the-shelf component-based real-time optical OFDM (OOFDM) transceivers incorporating advanced channel estimation, on-line performance monitoring and live parameter optimisation, is experimentally investigated, for the first time, in intensity-modulation and direct-detection (IMDD) single-mode fibre (SMF) and multi-mode fibre (MMF) transmission systems involving directly modulated DFB lasers. The highest ever spectral efficiency of 5.25bit/s/Hz is demonstrated successfully in the aforementioned simple systems. Experimental investigations show that, it is feasible to transmit 5.25 Gb/s 128-QAM-encoded OOFDM real-time signals over 25 km MetroCor(TM) SMFs and 500 m 62.5/125 microm OM1 MMFs. The impact of key parameters on the transmission performance of the real-time OOFDM transceivers with 128-QAM encoding are explored, based on which optimum signal clipping ratios are identified. PMID:19997277

  5. Detection and characterization of red blood cell (RBC) aggregation with photoacoustics

    NASA Astrophysics Data System (ADS)

    Hysi, Eno; Saha, Ratan K.; Rui, Min; Kolios, Michael C.

    2012-02-01

    Red blood cells (RBCs) aggregate in the presence of increased plasma fibrinogen and low shear forces during blood flow. RBC aggregation has been observed in deep vein thrombosis, sepsis and diabetes. We propose using photoacoustics (PA) as a non-invasive imaging modality to detect RBC aggregation. The theoretical and experimental feasibility of PA for detecting and characterizing aggregation was assessed. A simulation study was performed to generate PA signals from non-aggregated and aggregated RBCs using a frequency domain approach and to study the PA signals' dependence on hematocrit and aggregate size. The effect of the finite bandwidth nature of transducers on the PA power spectra was also investigated. Experimental confirmation of theoretical results was conducted using porcine RBC samples exposed to 1064 nm optical wavelength using the Imagio Small Animal PA imaging system (Seno Medical Instruments, Inc., San Antonio, TX). Aggregation was induced with Dextran-70 (Sigma-Aldrich, St. Louis, MO) and the effect of hematocrit and aggregation level was investigated. The theoretical and experimental PA signal amplitude increased linearly with increasing hematocrit. The theoretical dominant frequency content of PA signals shifted towards lower frequencies (<30 MHz) and 9 dB enhancements in spectral power were observed as the size of aggregates increased compared to non-aggregating RBCs. Calibration of the PA spectra with the transducer response obtained from a 200 nm gold film was performed to remove system dependencies. Analysis of the spectral parameters from the calibrated spectra suggested that PA can assess the degree of aggregation at multiple hematocrit and aggregation levels.

  6. Holographic characterization of protein aggregates

    NASA Astrophysics Data System (ADS)

    Wang, Chen; Zhong, Xiao; Ruffner, David; Stutt, Alexandra; Philips, Laura; Ward, Michael; Grier, David

    Holographic characterization directly measures the size distribution of subvisible protein aggregates in suspension and offers insights into their morphology. Based on holographic video microscopy, this analytical technique records and interprets holograms of individual aggregates in protein solutions as they flow down a microfluidic channel, without requiring labeling or other exceptional sample preparation. The hologram of an individual protein aggregate is analyzed in real time with the Lorenz-Mie theory of light scattering to measure that aggregate's size and optical properties. Detecting, counting and characterizing subvisible aggregates proceeds fast enough for time-resolved studies, and lends itself to tracking trends in protein aggregation arising from changing environmental factors. No other analytical technique provides such a wealth of particle-resolved characterization data in situ. Holographic characterization promises accelerated development of therapeutic protein formulations, improved process control during manufacturing, and streamlined quality assurance during storage and at the point of use. Mrsec and MRI program of the NSF, Spheryx Inc.

  7. The Spectral Shift Function and Spectral Flow

    NASA Astrophysics Data System (ADS)

    Azamov, N. A.; Carey, A. L.; Sukochev, F. A.

    2007-11-01

    At the 1974 International Congress, I. M. Singer proposed that eta invariants and hence spectral flow should be thought of as the integral of a one form. In the intervening years this idea has lead to many interesting developments in the study of both eta invariants and spectral flow. Using ideas of [24] Singer’s proposal was brought to an advanced level in [16] where a very general formula for spectral flow as the integral of a one form was produced in the framework of noncommutative geometry. This formula can be used for computing spectral flow in a general semifinite von Neumann algebra as described and reviewed in [5]. In the present paper we take the analytic approach to spectral flow much further by giving a large family of formulae for spectral flow between a pair of unbounded self-adjoint operators D and D + V with D having compact resolvent belonging to a general semifinite von Neumann algebra {mathcal{N}} and the perturbation V in {mathcal{N}} . In noncommutative geometry terms we remove summability hypotheses. This level of generality is made possible by introducing a new idea from [3]. There it was observed that M. G. Krein’s spectral shift function (in certain restricted cases with V trace class) computes spectral flow. The present paper extends Krein’s theory to the setting of semifinite spectral triples where D has compact resolvent belonging to {mathcal{N}} and V is any bounded self-adjoint operator in {mathcal{N}} . We give a definition of the spectral shift function under these hypotheses and show that it computes spectral flow. This is made possible by the understanding discovered in the present paper of the interplay between spectral shift function theory and the analytic theory of spectral flow. It is this interplay that enables us to take Singer’s idea much further to create a large class of one forms whose integrals calculate spectral flow. These advances depend critically on a new approach to the calculus of functions of non

  8. Aggregates of a cationic porphyrin as supramolecular probes for biopolymers.

    PubMed

    Occhiuto, Ilaria Giuseppina; Samperi, Mario; Trapani, Mariachiara; De Luca, Giovanna; Romeo, Andrea; Pasternack, Robert F; Scolaro, Luigi Monsù

    2015-12-01

    The copper(II) derivative of the dicationic trans-bis(N-methylpyridinium-4-yl)diphenylporphyrin (t-CuPagg) forms large fractal aggregates in aqueous solution under moderate ionic strength conditions. A kinetic investigation of the aggregation process allows for a choice of experimental conditions to quickly obtain stable assemblies in solution. These positively charged aggregates are able to interact efficiently with negatively charged chiral species, (including bacterial spores) leading to induced circular dichroism signals in the Soret region of the porphyrin, now acting as a sensitive chiroptical probe. PMID:26490712

  9. Aggregates of a cationic porphyrin as supramolecular probes for biopolymers.

    PubMed

    Occhiuto, Ilaria Giuseppina; Samperi, Mario; Trapani, Mariachiara; De Luca, Giovanna; Romeo, Andrea; Pasternack, Robert F; Scolaro, Luigi Monsù

    2015-12-01

    The copper(II) derivative of the dicationic trans-bis(N-methylpyridinium-4-yl)diphenylporphyrin (t-CuPagg) forms large fractal aggregates in aqueous solution under moderate ionic strength conditions. A kinetic investigation of the aggregation process allows for a choice of experimental conditions to quickly obtain stable assemblies in solution. These positively charged aggregates are able to interact efficiently with negatively charged chiral species, (including bacterial spores) leading to induced circular dichroism signals in the Soret region of the porphyrin, now acting as a sensitive chiroptical probe.

  10. Ajoene inhibition of platelet aggregation: possible mediation by a hemoprotein.

    PubMed

    Jamaluddin, M P; Krishnan, L K; Thomas, A

    1988-05-31

    Ajoene, an organosulfur compound derived from garlic, was found by spectral measurements, to interact, cooperatively, with a purified hemoprotein implicated, previously, in platelet activation. It modified the binding interactions of the protein with ligands, deemed to be physiologically relevant as effectors. The characteristics of the modifications were found to parallel those of ajoene induced modifications of agonist-induced aggregation kinetics of gel-filtered calf platelets.

  11. Aggregate Geometry in Amyloid Fibril Nucleation

    NASA Astrophysics Data System (ADS)

    Irbäck, Anders; Jónsson, Sigurður Æ.; Linnemann, Niels; Linse, Björn; Wallin, Stefan

    2013-02-01

    We present and study a minimal structure-based model for the self-assembly of peptides into ordered β-sheet-rich fibrils. The peptides are represented by unit-length sticks on a cubic lattice and interact by hydrogen bonding and hydrophobicity forces. Using Monte Carlo simulations with >105 peptides, we show that fibril formation occurs with sigmoidal kinetics in the model. To determine the mechanism of fibril nucleation, we compute the joint distribution in length and width of the aggregates at equilibrium, using an efficient cluster move and flat-histogram techniques. This analysis, based on simulations with 256 peptides in which aggregates form and dissolve reversibly, shows that the main free-energy barriers that a nascent fibril has to overcome are associated with changes in width.

  12. On the radiative properties of soot aggregates - Part 2: Effects of coating

    NASA Astrophysics Data System (ADS)

    Liu, Fengshan; Yon, Jérôme; Bescond, Alexandre

    2016-03-01

    The effects of weakly absorbing material coating on soot have attracted considerable research attention in recent years due to the significant influence of such coating on soot radiative properties and the large differences predicted by different numerical models. Soot aggregates were first numerically generated using the diffusion limited cluster aggregation algorithm to produce fractal aggregates formed by log-normally distributed polydisperse spherical primary particles in point-touch. These aggregates were then processed by adding a certain amount of primary particle overlapping and necking to simulate the soot morphology observed from transmission electron microscopy images. After this process, a layer of WAM coating of different thicknesses was added to these more realistic soot aggregates. The radiative properties of these coated soot aggregates over the spectral range of 266-1064 nm were calculated by the discrete dipole approximation (DDA) using the spectrally dependent refractive index of soot for four aggregates containing Np=1, 20, 51 and 96 primary particles. The considered coating thicknesses range from 0% (no coating) up to 100% coating in terms of the primary particle diameter. Coating enhances both the particle absorption and scattering cross sections, with much stronger enhancement to the scattering one, as well as the asymmetry factor and the single scattering albedo. The absorption enhancement is stronger in the UV than in the visible and the near infrared. The simple corrections to the Rayleigh-Debye-Gans fractal aggregates theory for uncoated soot aggregates are found not working for coated soot aggregates. The core-shell model significantly overestimates the absorption enhancement by coating in the visible and the near infrared compared to the DDA results of the coated soot particle. Treating an externally coated soot aggregate as an aggregate formed by individually coated primary particles significantly underestimates the absorption

  13. Privacy-Preserving Data Aggregation in Two-Tiered Wireless Sensor Networks with Mobile Nodes

    PubMed Central

    Yao, Yonglei; Liu, Jingfa; Xiong, Neal N.

    2014-01-01

    Privacy-preserving data aggregation in wireless sensor networks (WSNs) with mobile nodes is a challenging problem, as an accurate aggregation result should be derived in a privacy-preserving manner, under the condition that nodes are mobile and have no pre-specified keys for cryptographic operations. In this paper, we focus on the SUM aggregation function and propose two privacy-preserving data aggregation protocols for two-tiered sensor networks with mobile nodes: Privacy-preserving Data Aggregation against non-colluded Aggregator and Sink (PDAAS) and Privacy-preserving Data Aggregation against Colluded Aggregator and Sink (PDACAS). Both protocols guarantee that the sink can derive the SUM of all raw sensor data but each sensor's raw data is kept confidential. In PDAAS, two keyed values are used, one shared with the sink and the other shared with the aggregator. PDAAS can protect the privacy of sensed data against external eavesdroppers, compromised sensor nodes, the aggregator or the sink, but fails if the aggregator and the sink collude. In PDACAS, multiple keyed values are used in data perturbation, which are not shared with the aggregator or the sink. PDACAS can protect the privacy of sensor nodes even the aggregator and the sink collude, at the cost of a little more overhead than PDAAS. Thorough analysis and experiments are conducted, which confirm the efficacy and efficiency of both schemes. PMID:25390407

  14. Aggregated Indexing of Biomedical Time Series Data

    PubMed Central

    Woodbridge, Jonathan; Mortazavi, Bobak; Sarrafzadeh, Majid; Bui, Alex A.T.

    2016-01-01

    Remote and wearable medical sensing has the potential to create very large and high dimensional datasets. Medical time series databases must be able to efficiently store, index, and mine these datasets to enable medical professionals to effectively analyze data collected from their patients. Conventional high dimensional indexing methods are a two stage process. First, a superset of the true matches is efficiently extracted from the database. Second, supersets are pruned by comparing each of their objects to the query object and rejecting any objects falling outside a predetermined radius. This pruning stage heavily dominates the computational complexity of most conventional search algorithms. Therefore, indexing algorithms can be significantly improved by reducing the amount of pruning. This paper presents an online algorithm to aggregate biomedical times series data to significantly reduce the search space (index size) without compromising the quality of search results. This algorithm is built on the observation that biomedical time series signals are composed of cyclical and often similar patterns. This algorithm takes in a stream of segments and groups them to highly concentrated collections. Locality Sensitive Hashing (LSH) is used to reduce the overall complexity of the algorithm, allowing it to run online. The output of this aggregation is used to populate an index. The proposed algorithm yields logarithmic growth of the index (with respect to the total number of objects) while keeping sensitivity and specificity simultaneously above 98%. Both memory and runtime complexities of time series search are improved when using aggregated indexes. In addition, data mining tasks, such as clustering, exhibit runtimes that are orders of magnitudes faster when run on aggregated indexes.

  15. Peptide aggregation in neurodegenerative disease.

    PubMed

    Murphy, Regina M

    2002-01-01

    In the not-so-distant past, insoluble aggregated protein was considered as uninteresting and bothersome as yesterday's trash. More recently, protein aggregates have enjoyed considerable scientific interest, as it has become clear that these aggregates play key roles in many diseases. In this review, we focus attention on three polypeptides: beta-amyloid, prion, and huntingtin, which are linked to three feared neurodegenerative diseases: Alzheimer's, "mad cow," and Huntington's disease, respectively. These proteins lack any significant primary sequence homology, yet their aggregates possess very similar features, specifically, high beta-sheet content, fibrillar morphology, relative insolubility, and protease resistance. Because the aggregates are noncrystalline, secrets of their structure at nanometer resolution are only slowly yielding to X-ray diffraction, solid-state NMR, and other techniques. Besides structure, the aggregates may possess similar pathways of assembly. Two alternative assembly pathways have been proposed: the nucleation-elongation and the template-assisted mode. These two modes may be complementary, not mutually exclusive. Strategies for interfering with aggregation, which may provide novel therapeutic approaches, are under development. The structural similarities between protein aggregates of dissimilar origin suggest that therapeutic strategies successful against one disease may have broad utility in others. PMID:12117755

  16. Topics in Probabilistic Judgment Aggregation

    ERIC Educational Resources Information Center

    Wang, Guanchun

    2011-01-01

    This dissertation is a compilation of several studies that are united by their relevance to probabilistic judgment aggregation. In the face of complex and uncertain events, panels of judges are frequently consulted to provide probabilistic forecasts, and aggregation of such estimates in groups often yield better results than could have been made…

  17. Mineral of the month: aggregates

    USGS Publications Warehouse

    Tepordei, Valentin V.

    2005-01-01

    Natural aggregates, consisting of crushed stone, and sand and gravel, are a major contributor to economic health, and have an amazing variety of uses. Aggregates are among the most abundant mineral resources and are major basic raw materials used by construction, agriculture and other industries that employ complex chemical and metallurgical processes.

  18. Molecular aggregation of humic substances

    USGS Publications Warehouse

    Wershaw, R. L.

    1999-01-01

    Humic substances (HS) form molecular aggregates in solution and on mineral surfaces. Elucidation of the mechanism of formation of these aggregates is important for an understanding of the interactions of HS in soils arid natural waters. The HS are formed mainly by enzymatic depolymerization and oxidation of plant biopolymers. These reactions transform the aromatic and lipid plant components into amphiphilic molecules, that is, molecules that consist of separate hydrophobic (nonpolar) and hydrophilic (polar) parts. The nonpolar parts of the molecules are composed of relatively unaltered segments of plant polymers and the polar parts of carboxylic acid groups. These amphiphiles form membrane-like aggregates on mineral surfaces and micelle-like aggregates in solution. The exterior surfaces of these aggregates are hydrophilic, and the interiors constitute separate hydrophobic liquid-like phases.

  19. Nanoparticle aggregation: principles and modeling.

    PubMed

    Zhang, Wen

    2014-01-01

    The high surface area to volume ratio of nanoparticles usually results in highly reactive and colloidal instability compared to their bulk counterparts. Aggregation as well as many other transformations (e.g., dissolution) in the environment may alter the physiochemical properties, reactivity, fate, transport, and biological interactions (e.g., bioavailability and uptake) of nanoparticles. The unique properties pertinent to nanoparticles, such as shape, size, surface characteristics, composition, and electronic structures, greatly challenge the ability of colloid science to understand nanoparticle aggregation and its environmental impacts. This review briefly introduces fundamentals about aggregation, fractal dimensions, classic and extended Derjaguin-Landau-Verwey-Overbeak (DLVO) theories, aggregation kinetic modeling, experimental measurements, followed by detailed discussions on the major factors on aggregation and subsequent effects on nanomaterial transport and reactivity.

  20. Immunogenicity of Therapeutic Protein Aggregates.

    PubMed

    Moussa, Ehab M; Panchal, Jainik P; Moorthy, Balakrishnan S; Blum, Janice S; Joubert, Marisa K; Narhi, Linda O; Topp, Elizabeth M

    2016-02-01

    Therapeutic proteins have a propensity for aggregation during manufacturing, shipping, and storage. The presence of aggregates in protein drug products can induce adverse immune responses in patients that may affect safety and efficacy, and so it is of concern to both manufacturers and regulatory agencies. In this vein, there is a lack of understanding of the physicochemical determinants of immunological responses and a lack of standardized analytical methods to survey the molecular properties of aggregates associated with immune activation. In this review, we provide an overview of the basic immune mechanisms in the context of interactions with protein aggregates. We then critically examine the literature with emphasis on the underlying immune mechanisms as they relate to aggregate properties. Finally, we highlight the gaps in our current understanding of this issue and offer recommendations for future research. PMID:26869409

  1. Mechanics of fire ant aggregations

    NASA Astrophysics Data System (ADS)

    Tennenbaum, Michael; Liu, Zhongyang; Hu, David; Fernandez-Nieves, Alberto

    2016-01-01

    Fire ants link their bodies to form aggregations; these can adopt a variety of structures, they can drip and spread, or withstand applied loads. Here, by using oscillatory rheology, we show that fire ant aggregations are viscoelastic. We find that, at the lowest ant densities probed and in the linear regime, the elastic and viscous moduli are essentially identical over the spanned frequency range, which highlights the absence of a dominant mode of structural relaxation. As ant density increases, the elastic modulus rises, which we interpret by alluding to ant crowding and subsequent jamming. When deformed beyond the linear regime, the aggregation flows, exhibiting shear-thinning behaviour with a stress load that is comparable to the maximum load the aggregation can withstand before individual ants are torn apart. Our findings illustrate the rich, collective mechanical behaviour that can arise in aggregations of active, interacting building blocks.

  2. Mechanics of fire ant aggregations.

    PubMed

    Tennenbaum, Michael; Liu, Zhongyang; Hu, David; Fernandez-Nieves, Alberto

    2016-01-01

    Fire ants link their bodies to form aggregations; these can adopt a variety of structures, they can drip and spread, or withstand applied loads. Here, by using oscillatory rheology, we show that fire ant aggregations are viscoelastic. We find that, at the lowest ant densities probed and in the linear regime, the elastic and viscous moduli are essentially identical over the spanned frequency range, which highlights the absence of a dominant mode of structural relaxation. As ant density increases, the elastic modulus rises, which we interpret by alluding to ant crowding and subsequent jamming. When deformed beyond the linear regime, the aggregation flows, exhibiting shear-thinning behaviour with a stress load that is comparable to the maximum load the aggregation can withstand before individual ants are torn apart. Our findings illustrate the rich, collective mechanical behaviour that can arise in aggregations of active, interacting building blocks. PMID:26501413

  3. Adsorption-induced colloidal aggregation

    NASA Astrophysics Data System (ADS)

    Law, B. M.; Petit, J.-M.; Beysens, D.

    1998-03-01

    Reversible colloidal aggregation in binary liquid mixtures has been studied for a number of years. As the phase separation temperature of the liquid mixture is approached the thickness of an adsorption layer around the colloidal particles increases. Beysens and coworkers have demonstrated experimentally that this adsorption layer is intimately connected with the aggregation of the colloidal particles, however, no definitive theory has been available which can explain all of the experimental observations. In this contribution we describe an extension of the Derjaguin, Landau, Verwey, and Overbeek theory of colloidal aggregation which takes into account the presence of the adsorption layer and which more realistically models the attractive dispersion interactions. This modified theory can quantitatively account for many of the observed experimental features such as the characteristics of the aggregated state, the general shape of the aggregation line, and the temperature dependence of the second virial coefficient for a lutidine-water mixture containing a small volume fraction of silica colloidal particles.

  4. On the radiative properties of soot aggregates part 1: Necking and overlapping

    NASA Astrophysics Data System (ADS)

    Yon, J.; Bescond, A.; Liu, F.

    2015-09-01

    There is a strong interest in accurately modelling the radiative properties of soot aggregates (also known as black carbon particles) emitted from combustion systems and fires to gain improved understanding of the role of black carbon to global warming. This study conducted a systematic investigation of the effects of overlapping and necking between neighbouring primary particles on the radiative properties of soot aggregates using the discrete dipole approximation. The degrees of overlapping and necking are quantified by the overlapping and necking parameters. Realistic soot aggregates were generated numerically by constructing overlapping and necking to fractal aggregates formed by point-touch primary particles simulated using a diffusion-limited cluster aggregation algorithm. Radiative properties (differential scattering, absorption, total scattering, specific extinction, asymmetry factor and single scattering albedo) were calculated using the experimentally measured soot refractive index over the spectral range of 266-1064 nm for 9 combinations of the overlapping and necking parameters. Overlapping and necking affect significantly the absorption and scattering properties of soot aggregates, especially in the near UV spectrum due to the enhanced multiple scattering effects within an aggregate. By using correctly modified aggregate properties (fractal dimension, prefactor, primary particle radius, and the number of primary particle) and by accounting for the effects of multiple scattering, the simple Rayleigh-Debye-Gans theory for fractal aggregates can reproduce reasonably accurate radiative properties of realistic soot aggregates.

  5. Multidimensional spectral load balancing

    SciTech Connect

    Hendrickson, B.; Leland, R.

    1993-01-01

    We describe an algorithm for the static load balancing of scientific computations that generalizes and improves upon spectral bisection. Through a novel use of multiple eigenvectors, our new spectral algorithm can divide a computation into 4 or 8 pieces at once. These multidimensional spectral partitioning algorithms generate balanced partitions that have lower communication overhead and are less expensive to compute than those produced by spectral bisection. In addition, they automatically work to minimize message contention on a hypercube or mesh architecture. These spectral partitions are further improved by a multidimensional generalization of the Kernighan-Lin graph partitioning algorithm. Results on several computational grids are given and compared with other popular methods.

  6. Secure data aggregation in wireless sensor networks using homomorphic encryption

    NASA Astrophysics Data System (ADS)

    Kumar, Manish; Verma, Shekhar; Lata, Kusum

    2015-04-01

    In a Wireless Sensor Network (WSN), aggregation exploits the correlation between spatially and temporally proximate sensor data to reduce the total data volume to be transmitted to the sink. Mobile agents (MAs) fit into this paradigm, and data can be aggregated and collected by an MA from different sensor nodes using context specific codes. The MA-based data collection suffers due to large size of a typical WSN and is prone to security problems. In this article, homomorphic encryption in a clustered WSN has been proposed for secure and efficient data collection using MAs. The nodes keep encrypted data that are given to an MA for data aggregation tasks. The MA performs all the data aggregation operations upon encrypted data as it migrates between nodes in a tree-like structure in which the nodes are leafs and the cluster head is the root of the tree. It returns and deposits the encrypted aggregated data to the cluster head after traversing through all the intra cluster nodes over a shortest path route. The homomorphic encryption and aggregation processing in encrypted domain makes the data collection process secure. Simulation results confirm the effectiveness of the proposed secure data aggregation mechanism. In addition to security, MA-based mechanism leads to lesser delay and bandwidth requirements.

  7. Spectral Fingerprinting: The potential of VNIR-SWIR spectral characteristics for tracing sediment sources in a Spanish mesoscale catchment

    NASA Astrophysics Data System (ADS)

    Brosinsky, Arlena; Foerster, Saskia; Segl, Karl; Bronstert, Axel; Kaufmann, Hermann; Lopéz-Tarazón, José-Andrés

    2014-05-01

    analyses (PCA) were applied to determine natural clustering of samples and discriminant function analyses to assess source discrimination potential of features. Mixture modelling was applied to determine source contribution. We found that three source types could be reliably discriminated based on spectral parameters, whereas aggregation of source types that could not be discriminated did not improve unmixing results. Despite providing similar discrimination accuracies as lab source parameters, in-situ derived source information was found insufficient for contribution modelling. Lab-measured spectral fingerprints permitted the quantification of source contribution to artificial mixtures, whereas introduction of source heterogeneity decreased modelling accuracies. Suspended sediment sources were found to vary between as well as within flood events, whereas badlands were always the major sources, forests and grasslands contributed little and other sources (not further determinable) up to 40 %. The analyses further suggested that sediment sources differ between the subcatchments and that subcatchments comprising relatively large proportions of badlands contributed most to the four flood events analysed in detail. From this study, we conclude that spectral fingerprints provide a rapid, cost-efficient and non-destructive alternative to classic fingerprint properties. However, since composites of fingerprint characteristics were found most promising in previous studies, a combination of spectral with further fingerprint properties could potentially permit discrimination of a higher number of source types.

  8. Simulation of the optical properties of plate aggregates for application to the remote sensing of cirrus clouds.

    PubMed

    Xie, Yu; Yang, Ping; Kattawar, George W; Baum, Bryan A; Hu, Yongxiang

    2011-03-10

    In regions of deep tropical convection, ice particles often undergo aggregation and form complex chains. To investigate the effect of the representation of aggregates on electromagnetic scattering calculations, we developed an algorithm to efficiently specify the geometries of aggregates and to compute some of their geometric parameters, such as the projected area. Based on in situ observations, ice aggregates are defined as clusters of hexagonal plates with a chainlike overall shape, which may have smooth or roughened surfaces. An aggregate representation is developed with 10 ensemble members, each consisting of between 4-12 hexagonal plates. The scattering properties of an individual aggregate ice particle are computed using either the discrete dipole approximation or an improved geometric optics method, depending upon the size parameters. Subsequently, the aggregate properties are averaged over all geometries. The scattering properties of the aggregate representation closely agree with those computed from 1000 different aggregate geometries. As a result, the aggregate representation provides an accurate and computationally efficient way to represent all aggregates occurring within ice clouds. Furthermore, the aggregate representation can be used to study the influence of these complex ice particles on the satellite-based remote sensing of ice clouds. The computed cloud reflectances for aggregates are different from those associated with randomly oriented individual hexagonal plates. When aggregates are neglected, simulated cloud reflectances are generally lower at visible and shortwave-infrared wavelengths, resulting in smaller effective particle sizes but larger optical thicknesses.

  9. Spectral element methods - Algorithms and architectures

    NASA Technical Reports Server (NTRS)

    Fischer, Paul; Ronquist, Einar M.; Dewey, Daniel; Patera, Anthony T.

    1988-01-01

    Spectral element methods are high-order weighted residual techniques for partial differential equations that combine the geometric flexibility of finite element methods with the rapid convergence of spectral techniques. Spectral element methods are described for the simulation of incompressible fluid flows, with special emphasis on implementation of spectral element techniques on medium-grained parallel processors. Two parallel architectures are considered; the first, a commercially available message-passing hypercube system; the second, a developmental reconfigurable architecture based on Geometry-Defining Processors. High parallel efficiency is obtained in hypercube spectral element computations, indicating that load balancing and communication issues can be successfully addressed by a high-order technique/medium-grained processor algorithm-architecture coupling.

  10. Spectral element methods: Algorithms and architectures

    NASA Technical Reports Server (NTRS)

    Fischer, Paul; Ronquist, Einar M.; Dewey, Daniel; Patera, Anthony T.

    1988-01-01

    Spectral element methods are high-order weighted residual techniques for partial differential equations that combine the geometric flexibility of finite element methods with the rapid convergence of spectral techniques. Spectral element methods are described for the simulation of incompressible fluid flows, with special emphasis on implementation of spectral element techniques on medium-grained parallel processors. Two parallel architectures are considered: the first, a commercially available message-passing hypercube system; the second, a developmental reconfigurable architecture based on Geometry-Defining Processors. High parallel efficiency is obtained in hypercube spectral element computations, indicating that load balancing and communication issues can be successfully addressed by a high-order technique/medium-grained processor algorithm-architecture coupling.

  11. Microelectrode measurements of the activity distribution in nitrifying bacterial aggregates

    SciTech Connect

    Beer, D. de; Heuval, J.C. van den; Ottengraf, S.P.P. )

    1993-02-01

    Environmental problems caused by strongly increased ammonium emission by intensive agricultural and industrial activities, wastewater and waste gas purification plants are being redesigned. Since the growth rates and biomass yields of nitrifying organisms are low, their application in continuous-flow processes requires efficient retention of biomass, and development of bacterial aggregates with good settling properties is needed. In this study microelectrodes were used to study the activity distribution of bacterial aggregates in a biological fluidized-bed nitrification reactor with an external aerator. Measurements of ammonium, oxygen, nitrate, and pH were made. Results included the following: biomass yield was close to expected; the active nitrifying zone was limited to the outer 100 to 120 [mu]m of the aggregates; distribution of activity was determined by the penetration depth of oxygen during aggregate development; measurements of activity required the use of ammonium or nitrate microelectrodes, not oxygen microelectrodes alone. 32 refs., 5 figs., 2 tabs.

  12. Fractal aggregates in Titan's atmosphere

    NASA Astrophysics Data System (ADS)

    Cabane, M.; Rannou, P.; Chassefiere, E.; Israel, G.

    1993-04-01

    The cluster structure of Titan's atmosphere was modeled by using an Eulerian microphysical model with the specific formulation of microphysical laws applying to fractal particles. The growth of aggregates in the settling phase was treated by introducing the fractal dimension as a parameter of the model. The model was used to obtain a vertical distribution of size and number density of the aggregates for different production altitudes. Results confirm previous estimates of the formation altitude of photochemical aerosols. The vertical profile of the effective radius of aggregates was calculated as a function of the visible optical depth.

  13. Rayleigh imaging in spectral mammography

    NASA Astrophysics Data System (ADS)

    Berggren, Karl; Danielsson, Mats; Fredenberg, Erik

    2016-03-01

    Spectral imaging is the acquisition of multiple images of an object at different energy spectra. In mammography, dual-energy imaging (spectral imaging with two energy levels) has been investigated for several applications, in particular material decomposition, which allows for quantitative analysis of breast composition and quantitative contrast-enhanced imaging. Material decomposition with dual-energy imaging is based on the assumption that there are two dominant photon interaction effects that determine linear attenuation: the photoelectric effect and Compton scattering. This assumption limits the number of basis materials, i.e. the number of materials that are possible to differentiate between, to two. However, Rayleigh scattering may account for more than 10% of the linear attenuation in the mammography energy range. In this work, we show that a modified version of a scanning multi-slit spectral photon-counting mammography system is able to acquire three images at different spectra and can be used for triple-energy imaging. We further show that triple-energy imaging in combination with the efficient scatter rejection of the system enables measurement of Rayleigh scattering, which adds an additional energy dependency to the linear attenuation and enables material decomposition with three basis materials. Three available basis materials have the potential to improve virtually all applications of spectral imaging.

  14. A numerical study of soot aggregate formation in a laminar coflow diffusion flame

    SciTech Connect

    Zhang, Q.; Thomson, M.J.; Guo, H.; Liu, F.; Smallwood, G.J.

    2009-03-15

    Soot aggregate formation in a two-dimensional laminar coflow ethylene/air diffusion flame is studied with a pyrene-based soot model, a detailed sectional aerosol dynamics model, and a detailed radiation model. The chemical kinetic mechanism describes polycyclic aromatic hydrocarbon formation up to pyrene, the dimerization of which is assumed to lead to soot nucleation. The growth and oxidation of soot particles are characterized by the HACA surface mechanism and pyrene-soot surface condensation. The mass range of the solid soot phase is divided into thirty-five discrete sections and two equations are solved in each section to model the formation of the fractal-like soot aggregates. The coagulation model is improved by implementing the aggregate coagulation efficiency. Several physical processes that may cause sub-unitary aggregate coagulation efficiency are discussed. Their effects on aggregate structure are numerically investigated. The average number of primary soot particles per soot aggregate n{sub p} is found to be a strong function of the aggregate coagulation efficiency. Compared to the available experimental data, n{sub p} is well reproduced with a constant 20% aggregate coagulation efficiency. The predicted axial velocity, OH mole fraction, and C{sub 2}H{sub 2} mole fraction are validated against experimental data in the literature. Reasonable agreements are obtained. Finally, a sensitivity study of the effects of particle coalescence on soot volume fraction and soot aggregate nanostructure is conducted using a coalescence cutoff diameter method. (author)

  15. Spectral superbroadening of femtosecond laser pulses

    NASA Astrophysics Data System (ADS)

    Wittmann, M.; Penzkofer, A.

    1996-02-01

    The spectral superbroadening of femtosecond pulses in water, heavy water, ethanol, and fused silica is studied under strong focusing conditions. Efficient transient stimulated Raman scattering, impulsive stimulated Raman scattering, longitudinally phase-matched parametric four-photon interaction, and cascading light up-conversion and down-conversion are responsible for the spectral superbroadening. Self-phase modulation and cross-phase modulation broaden the laser and stimulated Raman lines.

  16. Low-Velocity Aggregate Collisions Simulating Planetary Ring Dynamics

    NASA Astrophysics Data System (ADS)

    Dove, A.; Colwell, J. E.; Bradley, E. T.; Vamos, C.

    2012-12-01

    Proto-planetary and planetary ring system evolution is driven by collisions between small particles and aggregates that may be composed of dust, water ice, or a combination of materials. In these collisional systems, impacts between objects can occur at very low velocities, much less than 1 m/s. Low-velocity impacts can have competing effects: at the lowest velocities, collisions may play a critical role in growth into larger aggregates; at slightly higher velocities, collisions can cause break-up and release of material. In the Saturnian ring system, for instance, particles are excited to such "higher" velocities (10's of cm/s) in regions where density waves enhance particle concentrations. These conditions are present in the A ring, and it has been hypothesized that collisions have an additional effect of modifying the spectral properties of the ring particles, which are composed of a mix of ice and dust (Nicholson et al., 2008). This modification may occur when collisions cause ejection of material with different spectral characteristics, or by breaking particles apart to reveal more pristine interiors. We have designed and built an apparatus to simulate low-velocity collisions between aggregates in a laboratory vacuum environment. In our experiment, two aggregates are launched towards each other; the resulting impact velocities are controlled by the initial spring launch velocity, the masses of the aggregates, and timing of the collisions. Initially, we use lunar regolith simulant to create the aggregates; the simulant can be packed to different densities to control the mass and porosity of the impactors. We also create aggregates that are mixtures of materials, including icy components. A high-speed digital video camera is used to record the impacts to observe the behavior of both impactors and the resulting ejecta material. We observe over a range of velocities to identify the conditions under which aggregates shed only some material from the surface, or

  17. Surface fractals in liposome aggregation.

    PubMed

    Roldán-Vargas, Sándalo; Barnadas-Rodríguez, Ramon; Quesada-Pérez, Manuel; Estelrich, Joan; Callejas-Fernández, José

    2009-01-01

    In this work, the aggregation of charged liposomes induced by magnesium is investigated. Static and dynamic light scattering, Fourier-transform infrared spectroscopy, and cryotransmission electron microscopy are used as experimental techniques. In particular, multiple intracluster scattering is reduced to a negligible amount using a cross-correlation light scattering scheme. The analysis of the cluster structure, probed by means of static light scattering, reveals an evolution from surface fractals to mass fractals with increasing magnesium concentration. Cryotransmission electron microscopy micrographs of the aggregates are consistent with this interpretation. In addition, a comparative analysis of these results with those previously reported in the presence of calcium suggests that the different hydration energy between lipid vesicles when these divalent cations are present plays a fundamental role in the cluster morphology. This suggestion is also supported by infrared spectroscopy data. The kinetics of the aggregation processes is also analyzed through the time evolution of the mean diffusion coefficient of the aggregates. PMID:19257067

  18. Surface fractals in liposome aggregation.

    PubMed

    Roldán-Vargas, Sándalo; Barnadas-Rodríguez, Ramon; Quesada-Pérez, Manuel; Estelrich, Joan; Callejas-Fernández, José

    2009-01-01

    In this work, the aggregation of charged liposomes induced by magnesium is investigated. Static and dynamic light scattering, Fourier-transform infrared spectroscopy, and cryotransmission electron microscopy are used as experimental techniques. In particular, multiple intracluster scattering is reduced to a negligible amount using a cross-correlation light scattering scheme. The analysis of the cluster structure, probed by means of static light scattering, reveals an evolution from surface fractals to mass fractals with increasing magnesium concentration. Cryotransmission electron microscopy micrographs of the aggregates are consistent with this interpretation. In addition, a comparative analysis of these results with those previously reported in the presence of calcium suggests that the different hydration energy between lipid vesicles when these divalent cations are present plays a fundamental role in the cluster morphology. This suggestion is also supported by infrared spectroscopy data. The kinetics of the aggregation processes is also analyzed through the time evolution of the mean diffusion coefficient of the aggregates.

  19. Spectral response measurements with white light bias

    NASA Technical Reports Server (NTRS)

    Devaney, W.; Lorenz, S.; Meakin, J. D.

    1976-01-01

    The spectral response of solar cells such as the CdS/Cu2S cell is non-linear with distinct quenching and enhancement bands. One possible technique to produce standardized solar efficiencies is to fold in spectral response with a standard solar spectrum. The spectral response of a cell was measured in a way which matched cell behavior under white light illumination. A technique was developed to measure the response of a cell to low intensity chopped monochromatic light while the cell is also illuminated with a white light bias corresponding to AMI.

  20. On the dynamics of the TPPS4 aggregation in aqueous solutions: successive formation of H and J aggregates.

    PubMed

    Aggarwal, Lucimara P F; Borissevitch, Iouri E

    2006-01-01

    The dynamics of aggregation of meso-tetrakis (p-sulfonatofenyl) porphyrin (TPPS4) in function of its concentration, pH and ionic strength was studied by optical absorption, fluorescence and resonance light scattering (RLS) techniques. In the region of pH, where TPPS4 exists in biprotonated form, the addition of NaCl induces the TPPS4 aggregation due to the formation of the "cloud" of counter ions around the TPPS4 molecule thus reducing electrostatic repulsion between the porphyrin molecules. The formation of this "cloud" shifts the pKa value to acid region (from 5.0 in the absence of salt to 4.5 at [NaCl] = 0.4 M), reduces the TPPS4 absorption in all spectral range and quantum yield and lifetime of fluorescence (from 0.27 to 0.17 and from 4.00+/-0.04 to 3.00+/-0.03 ns in the absence of salt and in the presence of NaCl, respectively). The aggregation process involves two successive stages: initially H aggregates are formed, which in time are transformed in J ones. The existence of these two stages was confirmed by the fluorescence and RLS data. The kinetics of the formation of J aggregates is characterized by the induction time t1 and the average growth time t2, which depend on both TPPS4 and salt concentrations. The induction period t1 appears as a result of initial formation of H aggregates and their successive transformation in J ones. At very high TPPS4 concentrations, the J aggregates are united in more complex structures such as hollow cylinders or helixes.

  1. Electromagnetic charges in aggregation phenomena.

    NASA Astrophysics Data System (ADS)

    Rioux, Claude; Slobodrian, R. J.

    Introduction The mechanism of fine particles aggregation is of great importance in many areas of research, in particular environment sciences where the state of aggregation defines the removal speed of dust from the atmosphere. The study of this mechanism is also important to understand the first stage of planet formation from the solar nebula. The aggregates formed are generally fractals and, as mentioned in the literature [1], the fractal dimensions and the site growth probability measures of the resulting fractal structures strongly depend on the properties of the forces that cause the aggregation. Theory and experimental apparatus We began this study by the aggregation between two charged particles and we are now consid-ering the aggregation between two magnetized particles. The aggregations are produced in a gas at a pressure between 10 and 1000 mbar and by using the applicable simplifications; we find that the distance (r) between the particles as a function of time (t) is given by the following equations: r=Ce(tf -t)1/3 for the electrical attraction r=Cm(tf -t)1/5 for the magnetic dipoles aligned in an external magnetic field. The apparatus built for these measurements consists of an experimental cell from which two perpendicular views are combined via an optical system in one image recorded by a video camera. From the video, we can then measure the distance between the particles as a function of time and reconstruct the trajectories in 3-D. The horizontal and vertical resolutions are respectively 0.86 and 0.92 microns per pixel. With a depth of field of 250 microns, the usable volume for 3-D observation in then 250 microns x 250 microns x 443 microns. Results and discussion A first version of the apparatus was tested on an electrical force aggregation and the results [2] show that the corresponding equation is a good representation of the phenomenon. Preliminary results, from an experiment using iron particles, show that the magnetic force can be seen in

  2. Aggregate breakdown of nanoparticulate titania

    NASA Astrophysics Data System (ADS)

    Venugopal, Navin

    Six nanosized titanium dioxide powders synthesized from a sulfate process were investigated. The targeted end-use of this powder was for a de-NOx catalyst honeycomb monolith. Alteration of synthesis parameters had resulted principally in differences in soluble ion level and specific surface area of the powders. The goal of this investigation was to understand the role of synthesis parameters in the aggregation behavior of these powders. Investigation via scanning electron microscopy of the powders revealed three different aggregation iterations at specific length scales. Secondary and higher order aggregate strength was investigated via oscillatory stress rheometry as a means of simulating shear conditions encountered during extrusion. G' and G'' were measured as a function of the applied oscillatory stress. Oscillatory rheometry indicated a strong variation as a function of the sulfate level of the particles in the viscoelastic yield strengths. Powder yield stresses ranged from 3.0 Pa to 24.0 Pa of oscillatory stress. Compaction curves to 750 MPa found strong similarities in extrapolated yield point of stage I and II compaction for each of the powders (at approximately 500 MPa) suggesting that the variation in sulfate was greatest above the primary aggregate level. Scanning electron microscopy of samples at different states of shear in oscillatory rheometry confirmed the variation in the linear elastic region and the viscous flow regime. A technique of this investigation was to approach aggregation via a novel perspective: aggregates are distinguished as being loose open structures that are highly disordered and stochastic in nature. The methodology used was to investigate the shear stresses required to rupture the various aggregation stages encountered and investigate the attempt to realign the now free-flowing constituents comprising the aggregate into a denser configuration. Mercury porosimetry was utilized to measure the pore size of the compact resulting from

  3. Spectral calibration for convex grating imaging spectrometer

    NASA Astrophysics Data System (ADS)

    Zhou, Jiankang; Chen, Xinhua; Ji, Yiqun; Chen, Yuheng; Shen, Weimin

    2013-12-01

    Spectral calibration of imaging spectrometer plays an important role for acquiring target accurate spectrum. There are two spectral calibration types in essence, the wavelength scanning and characteristic line sampling. Only the calibrated pixel is used for the wavelength scanning methods and he spectral response function (SRF) is constructed by the calibrated pixel itself. The different wavelength can be generated by the monochromator. The SRF is constructed by adjacent pixels of the calibrated one for the characteristic line sampling methods. And the pixels are illuminated by the narrow spectrum line and the center wavelength of the spectral line is exactly known. The calibration result comes from scanning method is precise, but it takes much time and data to deal with. The wavelength scanning method cannot be used in field or space environment. The characteristic line sampling method is simple, but the calibration precision is not easy to confirm. The standard spectroscopic lamp is used to calibrate our manufactured convex grating imaging spectrometer which has Offner concentric structure and can supply high resolution and uniform spectral signal. Gaussian fitting algorithm is used to determine the center position and the Full-Width-Half-Maximum(FWHM)of the characteristic spectrum line. The central wavelengths and FWHMs of spectral pixels are calibrated by cubic polynomial fitting. By setting a fitting error thresh hold and abandoning the maximum deviation point, an optimization calculation is achieved. The integrated calibration experiment equipment for spectral calibration is developed to enhance calibration efficiency. The spectral calibration result comes from spectral lamp method are verified by monochromator wavelength scanning calibration technique. The result shows that spectral calibration uncertainty of FWHM and center wavelength are both less than 0.08nm, or 5.2% of spectral FWHM.

  4. Glycation precedes lens crystallin aggregation

    SciTech Connect

    Swamy, M.S.; Perry, R.E.; Abraham, E.C.

    1987-05-01

    Non-enzymatic glycosylation (glycation) seems to have the potential to alter the structure of crystallins and make them susceptible to thiol oxidation leading to disulfide-linked high molecular weight (HMW) aggregate formation. They used streptozotocin diabetic rats during precataract and cataract stages and long-term cell-free glycation of bovine lens crystallins to study the relationship between glycation and lens crystallin aggregation. HMW aggregates and other protein components of the water-soluble (WS) and urea-soluble (US) fractions were separated by molecular sieve high performance liquid chromatography. Glycation was estimated by both (/sup 3/H)NaBH/sub 4/ reduction and phenylboronate agarose affinity chromatography. Levels of total glycated protein (GP) in the US fractions were about 2-fold higher than in the WS fractions and there was a linear increase in GP in both WS and US fractions. This increase was parallelled by a corresponding increase in HMW aggregates. Total GP extracted by the affinity method from the US fraction showed a predominance of HMW aggregates and vice versa. Cell-free glycation studies with bovine crystallins confirmed the results of the animals studies. Increasing glycation caused a corresponding increase in protein insolubilization and the insoluble fraction thus formed also contained more glycated protein. It appears that lens protein glycation, HMW aggregate formation, and protein insolubilization are interrelated.

  5. Evaluating Spectral Signals to Identify Spectral Error

    PubMed Central

    Bazar, George; Kovacs, Zoltan; Tsenkova, Roumiana

    2016-01-01

    Since the precision and accuracy level of a chemometric model is highly influenced by the quality of the raw spectral data, it is very important to evaluate the recorded spectra and describe the erroneous regions before qualitative and quantitative analyses or detailed band assignment. This paper provides a collection of basic spectral analytical procedures and demonstrates their applicability in detecting errors of near infrared data. Evaluation methods based on standard deviation, coefficient of variation, mean centering and smoothing techniques are presented. Applications of derivatives with various gap sizes, even below the bandpass of the spectrometer, are shown to evaluate the level of spectral errors and find their origin. The possibility for prudent measurement of the third overtone region of water is also highlighted by evaluation of a complex data recorded with various spectrometers. PMID:26731541

  6. Ash Aggregates in Proximal Settings

    NASA Astrophysics Data System (ADS)

    Porritt, L. A.; Russell, K.

    2012-12-01

    Ash aggregates are thought to have formed within and been deposited by the eruption column and plume and dilute density currents and their associated ash clouds. Moist, turbulent ash clouds are considered critical to ash aggregate formation by facilitating both collision and adhesion of particles. Consequently, they are most commonly found in distal deposits. Proximal deposits containing ash aggregates are less commonly observed but do occur. Here we describe two occurrences of vent proximal ash aggregate-rich deposits; the first within a kimberlite pipe where coated ash pellets and accretionary lapilli are found within the intra-vent sequence; and the second in a glaciovolcanic setting where cored pellets (armoured lapilli) occur within <1 km of the vent. The deposits within the A418 pipe, Diavik Diamond Mine, Canada, are the residual deposits within the conduit and vent of the volcano and are characterised by an abundance of ash aggregates. Coated ash pellets are dominant but are followed in abundance by ash pellets, accretionary lapilli and rare cored pellets. The coated ash pellets typically range from 1 - 5 mm in diameter and have core to rim ratios of approximately 10:1. The formation and preservation of these aggregates elucidates the style and nature of the explosive phase of kimberlite eruption at A418 (and other pipes?). First, these pyroclasts dictate the intensity of the kimberlite eruption; it must be energetic enough to cause intense fragmentation of the kimberlite to produce a substantial volume of very fine ash (<62 μm). Secondly, the ash aggregates indicate the involvement of moisture coupled with the presence of dilute expanded eruption clouds. The structure and distribution of these deposits throughout the kimberlite conduit demand that aggregation and deposition operate entirely within the confines of the vent; this indicates that aggregation is a rapid process. Ash aggregates within glaciovolcanic sequences are also rarely documented. The

  7. Tunneling electron induced molecular electroluminescence from individual porphyrin J-aggregates

    SciTech Connect

    Meng, Qiushi; Zhang, Chao; Zhang, Yang E-mail: zcdong@ustc.edu.cn; Zhang, Yao; Liao, Yuan; Dong, Zhenchao E-mail: zcdong@ustc.edu.cn

    2015-07-27

    We investigate molecular electroluminescence from individual tubular porphyrin J-aggregates on Au(111) by tunneling electron excitations in an ultrahigh-vacuum scanning tunneling microscope (STM). High-resolution STM images suggest a spiral tubular structure for the porphyrin J-aggregate with highly ordered “brickwork”-like arrangements. Such aggregated nanotube is found to behave like a self-decoupled molecular architecture and shows red-shifted electroluminescence characteristics of J-aggregates originated from the delocalized excitons. The positions of the emission peaks are found to shift slightly depending on the excitation sites, which, together with the changes in the observed spectral profiles with vibronic progressions, suggest a limited exciton coherence number within several molecules. The J-aggregate electroluminescence is also found unipolar, occurring only at negative sample voltages, which is presumably related to the junction asymmetry in the context of molecular excitations via the carrier injection mechanism.

  8. Spectral methods for CFD

    NASA Technical Reports Server (NTRS)

    Zang, Thomas A.; Streett, Craig L.; Hussaini, M. Yousuff

    1989-01-01

    One of the objectives of these notes is to provide a basic introduction to spectral methods with a particular emphasis on applications to computational fluid dynamics. Another objective is to summarize some of the most important developments in spectral methods in the last two years. The fundamentals of spectral methods for simple problems will be covered in depth, and the essential elements of several fluid dynamical applications will be sketched.

  9. Realization of band gap shrinkage to the spectral characteristics of high-luminous-efficiency 658 nm AlGaInP/GaInP multiple quantum well lasers at room temperatures

    NASA Astrophysics Data System (ADS)

    Chackrabarti, Santosh; Zargar, Rayees A.; Bansal, Jyoti; Zaker, Tho-alfiqar A.; Hafiz, A. K.

    2016-08-01

    The temperature dependent spectral shifts in 658 nm AlGaInP multiple quantum well (MQW) red laser diodes due to band gap narrowing at room temperatures (5 °Csbnd 45 °C) is reported. The density of states effective mass approximation and the conduction band effective mass approximation are employed to formulate the carrier concentrations. The spectral shift mechanism is explored with a threshold current density of 42.28 kA/cm2 and a good characteristic temperature of 149 K. The photoluminescence (PL) peak intensity shifts towards the higher wavelength(red shift) and the full width at half maximum (FWHM) increases with the increase in temperature. The band gap narrowing value determined by a simple formula amounts to 67.4 meV and displays N1/3 dependence at higher densities. The carrier density dependence conveys that the red shift of the spectral emission is due to band gap narrowing.

  10. Crystal aggregation in kidney stones; a polymer aggregation problem?

    NASA Astrophysics Data System (ADS)

    Wesson, J.; Beshensky, A.; Viswanathan, P.; Zachowicz, W.; Kleinman, J.

    2008-03-01

    Kidney stones most frequently form as aggregates of calcium oxalate monohydrate (COM) crystals with organic layers between them, and the organic layers contain principally proteins. The pathway leading to the formation of these crystal aggregates in affected people has not been identified, but stone forming patients are thought to have a defect in the structure or distribution of urinary proteins, which normally protect against stone formation. We have developed two polyelectrolyte models that will induce COM crystal aggregation in vitro, and both are consistent with possible urinary protein compositions. The first model was based on mixing polyanionic and polycationic proteins, in portions such that the combined protein charge is near zero. The second model was based on reducing the charge density on partially charged polyanionic proteins, specifically Tamm-Horsfall protein, the second most abundant protein in urine. Both models demonstrated polymer phase separation at solution conditions where COM crystal aggregation was observed. Correlation with data from other bulk crystallization measurements suggest that the anionic side chains form critical binding interactions with COM surfaces that are necessary along with the phase separation process to induce COM crystal aggregation.

  11. Transport optimization considering the node aggregation ability

    NASA Astrophysics Data System (ADS)

    Liu, Gang; Li, Lian; Guo, Jiawei; Li, Zheng

    2015-10-01

    Using the theories of complex networks and gravitational field, we study the dynamic routing process under the framework of node gravitational field, define the equation of gravitation of travel path to data package and introduce two parameters α and γ for adjusting the dependences of transmission data on the unblocked degree of node, the transmission capacity of node and the path length. Based on the path's attraction, a gravitational field routing strategy under node connection ability constraint is proposed with considering the affect of node aggregation ability to transport process, and a parameter is used to adjust the control strength of routing process to node aggregation ability. In order to clarify the efficiency of suggested method, we introduce an order parameter η to measure the throughput of the network by the critical value of phase transition from free state to congestion state, and analyze the distribution of betweenness centrality and traffic jam. Simulation results show that, compared with the traditional shortest path routing strategy, our method greatly improve the throughput of a network, balance the network traffic load and most of the network nodes are used efficiently. Moreover, the network throughput is maximized under μ = -1, and the transmission performance of the algorithm is independent of the values of α and γ, which indicate the routing strategy is stable and reliable.

  12. Mechanism of Algal Aggregation by Bacillus sp. Strain RP1137

    PubMed Central

    Powell, Ryan J.

    2014-01-01

    Alga-derived biofuels are one of the best alternatives for economically replacing liquid fossil fuels with a fungible renewable energy source. Production of fuel from algae is technically feasible but not yet economically viable. Harvest of dilute algal biomass from the surrounding water remains one of the largest barriers to economic production of algal biofuel. We identified Bacillus sp. strain RP1137 in a previous study and showed that this strain can rapidly aggregate several biofuel-producing algae in a pH- and divalent-cation-dependent manner. In this study, we further characterized the mechanism of algal aggregation by RP1137. We show that aggregation of both algae and bacteria is optimal in the exponential phase of growth and that the density of ionizable residues on the RP1137 cell surface changes with growth stage. Aggregation likely occurs via charge neutralization with calcium ions at the cell surface of both algae and bacteria. We show that charge neutralization occurs at least in part through binding of calcium to negatively charged teichoic acid residues. The addition of calcium also renders both algae and bacteria more able to bind to hydrophobic beads, suggesting that aggregation may occur through hydrophobic interactions. Knowledge of the aggregation mechanism may enable engineering of RP1137 to obtain more efficient algal harvesting. PMID:24771029

  13. Cell-to-cell propagation of infectious cytosolic protein aggregates

    PubMed Central

    Hofmann, Julia P.; Denner, Philip; Nussbaum-Krammer, Carmen; Kuhn, Peer-Hendrik; Suhre, Michael H.; Scheibel, Thomas; Lichtenthaler, Stefan F.; Schätzl, Hermann M.; Bano, Daniele; Vorberg, Ina M.

    2013-01-01

    Prions are self-templating protein conformers that replicate by recruitment and conversion of homotypic proteins into growing protein aggregates. Originally identified as causative agents of transmissible spongiform encephalopathies, increasing evidence now suggests that prion-like phenomena are more common in nature than previously anticipated. In contrast to fungal prions that replicate in the cytoplasm, propagation of mammalian prions derived from the precursor protein PrP is confined to the cell membrane or endocytic vesicles. Here we demonstrate that cytosolic protein aggregates can also behave as infectious entities in mammalian cells. When expressed in the mammalian cytosol, protein aggregates derived from the prion domain NM of yeast translation termination factor Sup35 persistently propagate and invade neighboring cells, thereby inducing a self-perpetuating aggregation state of NM. Cell contact is required for efficient infection. Aggregates can also be induced in primary astrocytes, neurons, and organotypic cultures, demonstrating that this phenomenon is not specific to immortalized cells. Our data have important implications for understanding prion-like phenomena of protein aggregates associated with human diseases and for the growing number of amyloidogenic proteins discovered in mammals. PMID:23509289

  14. An Outline of Data Aggregation Security in Heterogeneous Wireless Sensor Networks.

    PubMed

    Boubiche, Sabrina; Boubiche, Djallel Eddine; Bilami, Azzedine; Toral-Cruz, Homero

    2016-01-01

    Data aggregation processes aim to reduce the amount of exchanged data in wireless sensor networks and consequently minimize the packet overhead and optimize energy efficiency. Securing the data aggregation process is a real challenge since the aggregation nodes must access the relayed data to apply the aggregation functions. The data aggregation security problem has been widely addressed in classical homogeneous wireless sensor networks, however, most of the proposed security protocols cannot guarantee a high level of security since the sensor node resources are limited. Heterogeneous wireless sensor networks have recently emerged as a new wireless sensor network category which expands the sensor nodes' resources and capabilities. These new kinds of WSNs have opened new research opportunities where security represents a most attractive area. Indeed, robust and high security level algorithms can be used to secure the data aggregation at the heterogeneous aggregation nodes which is impossible in classical homogeneous WSNs. Contrary to the homogeneous sensor networks, the data aggregation security problem is still not sufficiently covered and the proposed data aggregation security protocols are numberless. To address this recent research area, this paper describes the data aggregation security problem in heterogeneous wireless sensor networks and surveys a few proposed security protocols. A classification and evaluation of the existing protocols is also introduced based on the adopted data aggregation security approach. PMID:27077866

  15. An Outline of Data Aggregation Security in Heterogeneous Wireless Sensor Networks

    PubMed Central

    Boubiche, Sabrina; Boubiche, Djallel Eddine; Bilami, Azzedine; Toral-Cruz, Homero

    2016-01-01

    Data aggregation processes aim to reduce the amount of exchanged data in wireless sensor networks and consequently minimize the packet overhead and optimize energy efficiency. Securing the data aggregation process is a real challenge since the aggregation nodes must access the relayed data to apply the aggregation functions. The data aggregation security problem has been widely addressed in classical homogeneous wireless sensor networks, however, most of the proposed security protocols cannot guarantee a high level of security since the sensor node resources are limited. Heterogeneous wireless sensor networks have recently emerged as a new wireless sensor network category which expands the sensor nodes’ resources and capabilities. These new kinds of WSNs have opened new research opportunities where security represents a most attractive area. Indeed, robust and high security level algorithms can be used to secure the data aggregation at the heterogeneous aggregation nodes which is impossible in classical homogeneous WSNs. Contrary to the homogeneous sensor networks, the data aggregation security problem is still not sufficiently covered and the proposed data aggregation security protocols are numberless. To address this recent research area, this paper describes the data aggregation security problem in heterogeneous wireless sensor networks and surveys a few proposed security protocols. A classification and evaluation of the existing protocols is also introduced based on the adopted data aggregation security approach. PMID:27077866

  16. An Outline of Data Aggregation Security in Heterogeneous Wireless Sensor Networks.

    PubMed

    Boubiche, Sabrina; Boubiche, Djallel Eddine; Bilami, Azzedine; Toral-Cruz, Homero

    2016-04-12

    Data aggregation processes aim to reduce the amount of exchanged data in wireless sensor networks and consequently minimize the packet overhead and optimize energy efficiency. Securing the data aggregation process is a real challenge since the aggregation nodes must access the relayed data to apply the aggregation functions. The data aggregation security problem has been widely addressed in classical homogeneous wireless sensor networks, however, most of the proposed security protocols cannot guarantee a high level of security since the sensor node resources are limited. Heterogeneous wireless sensor networks have recently emerged as a new wireless sensor network category which expands the sensor nodes' resources and capabilities. These new kinds of WSNs have opened new research opportunities where security represents a most attractive area. Indeed, robust and high security level algorithms can be used to secure the data aggregation at the heterogeneous aggregation nodes which is impossible in classical homogeneous WSNs. Contrary to the homogeneous sensor networks, the data aggregation security problem is still not sufficiently covered and the proposed data aggregation security protocols are numberless. To address this recent research area, this paper describes the data aggregation security problem in heterogeneous wireless sensor networks and surveys a few proposed security protocols. A classification and evaluation of the existing protocols is also introduced based on the adopted data aggregation security approach.

  17. Investigation and visualization of internal flow through particle aggregates and microbial flocs using particle image velocimetry.

    PubMed

    Xiao, Feng; Lam, Kit Ming; Li, Xiao-yan

    2013-05-01

    An advanced particle-tracking and flow-visualization technology, particle image velocimetry (PIV), was utilized to investigate the hydrodynamic properties of large aggregates in water. The laser-based PIV system was used together with a settling column to capture the streamlines around two types of aggregates: latex particle aggregates and activated sludge (AS) flocs. Both types of the aggregates were highly porous and fractal with fractal dimensions of 2.13±0.31 for the latex particle aggregates (1210-2144 μm) and 1.78±0.24 for the AS flocs (1265-3737 μm). The results show that PIV is a powerful flow visualization technique capable of determining flow field details at the micrometer scale around and through settling aggregates and flocs. The PIV streamlines provided direct experimental proof of internal flow through the aggregate interiors. According to the PIV images, fluid collection efficiency ranged from 0.052 to 0.174 for the latex particle aggregates and from 0.008 to 0.126 for AS flocs. AS flocs are apparently less permeable than the particle aggregates, probably due to the extracellular polymeric substances (EPSs) produced by bacteria clogging the pores within the flocs. The internal permeation of fractal aggregates and bio-flocs would enhance flocculation between particles and material transport into the aggregates.

  18. Aggregation-structure-elasticity relationship of gels

    NASA Astrophysics Data System (ADS)

    Ma, Hang-Shing

    Aerogel is a mesoporous, low-density material which is desirable for applications like thermal insulation and low-k interlayer dielectric. However, its lack of mechanical integrity hinders its development. Experiments have shown that aerogels exhibit a scaling relationship E ∝ rho m between modulus E and density rho, with the exponent m usually between 3 and 4. The objective of the dissertation is to use computer modeling to understand how the random aggregation process accounts for the fractal structure and the compliant nature of aerogels. Model gels were created by the diffusion-limited cluster-cluster aggregation (DLCA), which simulates random aggregation leading to the sol-gel transition. Then each resulting structure was modeled as an elastic beam network and numerically compressed using the finite element method (FEM). Analyses showed that the DLCA gels reproduced the scaling relationship after trimming the non-contributive dangling branches from the mechanically efficient looped networks. The dangling bond deflection (DEF) model was therefore developed to model the random rotational movement of the dangling branches and the subsequent loop structure formation. Model gels with extensive loops and negligible dangling branches were simulated by combining the DLCA and DEF models. Representation of the aerogel networks by the DLCADEF models was validated for the resemblance of the fractal geometry and elastic behavior. The lack of mechanical integrity in aerogels is a natural consequence of the random aggregation and the resulting fractal structure. Fractal clusters are created in the early stage of aggregation, each of which is characterized by a dense core and sparse perimeter. These clusters grow in size until they percolate at the gel point by knitting together at the perimeters. The gel structure possesses a "blob-and-link" architecture, with the blobs representing the rigid cores of the fractal clusters, and the links corresponding to the tenuous chains

  19. Fractal Aggregates in Tennis Ball Systems

    ERIC Educational Resources Information Center

    Sabin, J.; Bandin, M.; Prieto, G.; Sarmiento, F.

    2009-01-01

    We present a new practical exercise to explain the mechanisms of aggregation of some colloids which are otherwise not easy to understand. We have used tennis balls to simulate, in a visual way, the aggregation of colloids under reaction-limited colloid aggregation (RLCA) and diffusion-limited colloid aggregation (DLCA) regimes. We have used the…

  20. Triatomic Spectral Database

    National Institute of Standards and Technology Data Gateway

    SRD 117 Triatomic Spectral Database (Web, free access)   All of the rotational spectral lines observed and reported in the open literature for 55 triatomic molecules have been tabulated. The isotopic molecular species, assigned quantum numbers, observed frequency, estimated measurement uncertainty and reference are given for each transition reported.

  1. Hydrocarbon Spectral Database

    National Institute of Standards and Technology Data Gateway

    SRD 115 Hydrocarbon Spectral Database (Web, free access)   All of the rotational spectral lines observed and reported in the open literature for 91 hydrocarbon molecules have been tabulated. The isotopic molecular species, assigned quantum numbers, observed frequency, estimated measurement uncertainty and reference are given for each transition reported.

  2. Diatomic Spectral Database

    National Institute of Standards and Technology Data Gateway

    SRD 114 Diatomic Spectral Database (Web, free access)   All of the rotational spectral lines observed and reported in the open literature for 121 diatomic molecules have been tabulated. The isotopic molecular species, assigned quantum numbers, observed frequency, estimated measurement uncertainty, and reference are given for each transition reported.

  3. Spectral collocation methods

    NASA Technical Reports Server (NTRS)

    Hussaini, M. Y.; Kopriva, D. A.; Patera, A. T.

    1987-01-01

    This review covers the theory and application of spectral collocation methods. Section 1 describes the fundamentals, and summarizes results pertaining to spectral approximations of functions. Some stability and convergence results are presented for simple elliptic, parabolic, and hyperbolic equations. Applications of these methods to fluid dynamics problems are discussed in Section 2.

  4. Spectral element methods for the incompressible Navier-Stokes equations

    NASA Technical Reports Server (NTRS)

    Maday, Yvon; Patera, Anthony T.

    1989-01-01

    Spectral element methods are high-order weighted-residual techniques for partial differential equations that combine the geometric flexibility of finite element techniques with the rapid convergence rate of spectral schemes. The theoretical foundations and numerical implementation of spectral element methods for the incompressible Navier-Stokes equations are presented, considering the construction and analysis of optimal-order spectral element discretizations for elliptic and saddle (Stokes) problems, as well as the efficient solution of the resulting discrete equations by rapidly convergent tensor-product-based iterative procedures. Several examples of spectral element simulation of moderate Reynolds number unsteady flow in complex geometry are presented.

  5. Aggregated Recommendation through Random Forests

    PubMed Central

    2014-01-01

    Aggregated recommendation refers to the process of suggesting one kind of items to a group of users. Compared to user-oriented or item-oriented approaches, it is more general and, therefore, more appropriate for cold-start recommendation. In this paper, we propose a random forest approach to create aggregated recommender systems. The approach is used to predict the rating of a group of users to a kind of items. In the preprocessing stage, we merge user, item, and rating information to construct an aggregated decision table, where rating information serves as the decision attribute. We also model the data conversion process corresponding to the new user, new item, and both new problems. In the training stage, a forest is built for the aggregated training set, where each leaf is assigned a distribution of discrete rating. In the testing stage, we present four predicting approaches to compute evaluation values based on the distribution of each tree. Experiments results on the well-known MovieLens dataset show that the aggregated approach maintains an acceptable level of accuracy. PMID:25180204

  6. Novel insights into amylin aggregation

    PubMed Central

    Pillay, Karen; Govender, Patrick

    2014-01-01

    Amylin is a peptide that aggregates into species that are toxic to pancreatic beta cells, leading to type II diabetes. This study has for the first time quantified amylin association and dissociation kinetics (association constant (ka) = 28.7 ± 5.1 L mol−1 s−1 and dissociation constant (kd) = 2.8 ± 0.6 ×10−4 s−1) using surface plasmon resonance (SPR). Thus far, techniques used for the sizing of amylin aggregates do not cater for the real-time monitoring of unconstrained amylin in solution. In this regard we evaluated recently innovated nanoparticle tracking analysis (NTA). In addition, both SPR and NTA were used to study the effect of previously synthesized amylin derivatives on amylin aggregation and to evaluate their potential as a cell-free system for screening potential inhibitors of amylin-mediated cytotoxicity. Results obtained from NTA highlighted a predominance of 100–300 nm amylin aggregates and correlation to previously published cytotoxicity results suggests the toxic species of amylin to be 200–300 nm in size. The results seem to indicate that NTA has potential as a new technique to monitor the aggregation potential of amyloid peptides in solution and also to screen potential inhibitors of amylin-mediated cytotoxicity. PMID:26019498

  7. DDA Computations of Porous Aggregates with Forsterite Crystals: Effects of Crystal Shape and Crystal Mass Fraction

    NASA Technical Reports Server (NTRS)

    Wooden, Diane H.; Lindsay, Sean S.; Harker, David; Woodward, Charles; Kelley, Michael S.; Kolokolova, Ludmilla

    2015-01-01

    Porous aggregate grains are commonly found in cometary dust samples and are needed to model cometary IR spectral energy distributions (SEDs). Models for thermal emissions from comets require two forms of silicates: amorphous and crystalline. The dominant crystal resonances observed in comet SEDs are from Forsterite (Mg2SiO4). The mass fractions that are crystalline span a large range from 0.0 < or = fcrystal < or = 0.74. Radial transport models that predict the enrichment of the outer disk (>25 AU at 1E6 yr) by inner disk materials (crystals) are challenged to yield the highend-range of cometary crystal mass fractions. However, in current thermal models, Forsterite crystals are not incorporated into larger aggregate grains but instead only are considered as discrete crystals. A complicating factor is that Forsterite crystals with rectangular shapes better fit the observed spectral resonances in wavelength (11.0-11.15 microns, 16, 19, 23.5, 27, and 33 microns), feature asymmetry and relative height (Lindley et al. 2013) than spherically or elliptically shaped crystals. We present DDA-DDSCAT computations of IR absorptivities (Qabs) of 3 micron-radii porous aggregates with 0.13 < or = fcrystal < or = 0.35 and with polyhedral-shaped Forsterite crystals. We can produce crystal resonances with similar appearance to the observed resonances of comet Hale- Bopp. Also, a lower mass fraction of crystals in aggregates can produce the same spectral contrast as a higher mass fraction of discrete crystals; the 11micron and 23 micron crystalline resonances appear amplified when crystals are incorporated into aggregates composed otherwise of spherically shaped amorphous Fe-Mg olivines and pyroxenes. We show that the optical properties of a porous aggregate is not linear combination of its monomers, so aggregates need to be computed. We discuss the consequence of lowering comet crystal mass fractions by modeling IR SEDs with aggregates with crystals, and the implications for radial

  8. Unraveling the aggregation effect on amorphous phase AIE luminogens: a computational study.

    PubMed

    Zheng, Xiaoyan; Peng, Qian; Zhu, Lizhe; Xie, Yujun; Huang, Xuhui; Shuai, Zhigang

    2016-08-18

    To achieve the efficient and precise regulation of aggregation-induced emission (AIE), unraveling the aggregation effects on amorphous AIE luminogens is of vital importance. Using a theoretical protocol combining molecular dynamics simulations and quantum mechanics/molecular mechanics calculations, we explored the relationship between molecular packing, optical spectra and fluorescence quantum efficiency of amorphous AIE luminogens hexaphenylsilole (HPS). We confirmed that the redshifted emission of amorphous aggregates as compared to crystalline HPS is caused by the lower packing density of amorphous HPS aggregates and the reduced restrictions on their intramolecular low-frequency vibrational motions. Strikingly, our calculations revealed the size independent fluorescence quantum efficiency of nanosized HPS aggregates and predicted the linear relationship between the fluorescence intensity and aggregate size. This is because the nanosized aggregates are dominated by embedded HPS molecules which exhibit similar fluorescence quantum efficiency at different aggregate sizes. In addition, our results provided a direct explanation for the crystallization-enhanced emission phenomenon of propeller-shaped AIE luminogens in experiments. Our theoretical protocol is general and applicable to other AIE luminogens, thus laying solid foundation for the rational design of advanced AIE materials. PMID:27417250

  9. Equilibrium structure of ferrofluid aggregates

    SciTech Connect

    Yoon, Mina; Tomanek, David

    2010-01-01

    We study the equilibrium structure of large but finite aggregates of magnetic dipoles, representing a colloidal suspension of magnetite particles in a ferrofluid. With increasing system size, the structural motif evolves from chains and rings to multi-chain and multi-ring assemblies. Very large systems form single- and multi-wall coils, tubes and scrolls. These structural changes result from a competition between various energy terms, which can be approximated analytically within a continuum model. We also study the effect of external parameters such as magnetic field on the relative stability of these structures. Our results may give insight into experimental data obtained during solidification of ferrofluid aggregates at temperatures where thermal fluctuations become negligible in comparison to inter-particle interactions. These data may also help to experimentally control the aggregation of magnetic particles.

  10. Customer Aggregation: An Opportunity for Green Power?

    SciTech Connect

    Holt, E.; Bird, L.

    2001-02-26

    We undertook research into the experience of aggregation groups to determine whether customer aggregation offers an opportunity to bring green power choices to more customers. The objectives of this report, therefore, are to (1) identify the different types of aggregation that are occurring today, (2) learn whether aggregation offers an opportunity to advance sales of green power, and (3) share these concepts and approaches with potential aggregators and green power advocates.

  11. Fractal aggregates in tennis ball systems

    NASA Astrophysics Data System (ADS)

    Sabin, J.; Bandín, M.; Prieto, G.; Sarmiento, F.

    2009-09-01

    We present a new practical exercise to explain the mechanisms of aggregation of some colloids which are otherwise not easy to understand. We have used tennis balls to simulate, in a visual way, the aggregation of colloids under reaction-limited colloid aggregation (RLCA) and diffusion-limited colloid aggregation (DLCA) regimes. We have used the images of the cluster of balls, following Forrest and Witten's pioneering studies on the aggregation of smoke particles, to estimate their fractal dimension.

  12. Dis-aggregation of an insoluble porphyrin in a calixarene matrix: characterization of aggregate modes by extended dipole model.

    PubMed

    de Miguel, Gustavo; Martín-Romero, María T; Pedrosa, José M; Muñoz, Eulogia; Pérez-Morales, Marta; Richardson, Tim H; Camacho, Luis

    2008-03-21

    In this paper, the different aggregation modes of a water-insoluble porphyrin (EHO) mixed with an amphiphilic calix[8]arene (C8A), at the air-water interface and in Langmuir-Blodgett (LB) film form, are analyzed as a function of the mixed composition. The strategy used to control the EHO aggregation has consisted of preparing mixed thin films containing EHO and C8A, in different ratios, at the air-water interface. Therefore, the increase of the C8A molar ratio in the mixed film diminishes the aggregation of the EHO molecules, although such an effect must be exclusively related to the dilution of the porphyrin. The reflection spectra of the mixed C8A-EHO films registered at the air-water interface, show a complex Soret band exhibiting splitting, hypochromicity and broadening features. Also, during the transfer process at high surface pressure, it has been shown that the EHO molecules are ejected from the C8A monolayer and only a fraction of porphyrin is transferred to the solid support, in spite of a complete transfer for the C8A matrix. The complex structure of the reflection spectra at the air-water interface, as well as the polarization dependence of the absorption spectra for the mixed LB films, indicate the existence of four different arrangements for the EHO hosted in the C8A matrix. The aggregate formation is governed by two factors: the attraction between the porphyrin rings which minimizes their separation, and the alkyl chain interactions, that is, hydrophobic effect and/or steric hindrance which determine and restrict the possible aggregation structures. By using the extended dipole model, the assignment of the spectral peaks observed to different EHO aggregates is shown. PMID:18327313

  13. Ion aggregation in high salt solutions. V. Graph entropy analyses of ion aggregate structure and water hydrogen bonding network.

    PubMed

    Choi, Jun-Ho; Cho, Minhaeng

    2016-05-28

    Dissolved ions in water tend to form polydisperse ion aggregates such as ion pairs, relatively compact ion clusters, and even spatially extended ion networks with increasing salt concentration. Combining molecular dynamics simulation and graph theoretical analysis methods, we recently studied morphological structures of ion aggregates with distinctively different characteristics. They can be distinguished from each other by calculating various spectral graph theoretical properties such as eigenvalues and eigenvectors of adjacency matrices of ion aggregates and water hydrogen-bonding networks, minimum path lengths, clustering coefficients, and degree distributions. Here, we focus on percolation and graph entropic properties of ion aggregates and water hydrogen-bonding networks in high salt solutions. Ion network-forming K(+) and SCN(-) ions at high concentrations show a percolating behavior in their aqueous solutions, but ion cluster-forming ions in NaCl solutions do not show such a transition from isolated ion aggregates to percolating ion-water mixture morphology. Despite that the ion aggregate structures are strikingly different for either cluster- or network-forming ions in high salt solutions, it is interesting that the water structures remain insensitive to the electrostatic properties, such as charge densities and polydentate properties, of dissolved ions, and morphological structures of water H-bonding networks appear to be highly robust regardless of the nature and concentration of salt. We anticipate that the present graph entropy analysis results would be of use in understanding a variety of anomalous behaviors of interfacial water around biomolecules as well as electric conductivities of high electrolyte solutions.

  14. Dis-aggregation of an insoluble porphyrin in a calixarene matrix: characterization of aggregate modes by extended dipole model.

    PubMed

    de Miguel, Gustavo; Martín-Romero, María T; Pedrosa, José M; Muñoz, Eulogia; Pérez-Morales, Marta; Richardson, Tim H; Camacho, Luis

    2008-03-21

    In this paper, the different aggregation modes of a water-insoluble porphyrin (EHO) mixed with an amphiphilic calix[8]arene (C8A), at the air-water interface and in Langmuir-Blodgett (LB) film form, are analyzed as a function of the mixed composition. The strategy used to control the EHO aggregation has consisted of preparing mixed thin films containing EHO and C8A, in different ratios, at the air-water interface. Therefore, the increase of the C8A molar ratio in the mixed film diminishes the aggregation of the EHO molecules, although such an effect must be exclusively related to the dilution of the porphyrin. The reflection spectra of the mixed C8A-EHO films registered at the air-water interface, show a complex Soret band exhibiting splitting, hypochromicity and broadening features. Also, during the transfer process at high surface pressure, it has been shown that the EHO molecules are ejected from the C8A monolayer and only a fraction of porphyrin is transferred to the solid support, in spite of a complete transfer for the C8A matrix. The complex structure of the reflection spectra at the air-water interface, as well as the polarization dependence of the absorption spectra for the mixed LB films, indicate the existence of four different arrangements for the EHO hosted in the C8A matrix. The aggregate formation is governed by two factors: the attraction between the porphyrin rings which minimizes their separation, and the alkyl chain interactions, that is, hydrophobic effect and/or steric hindrance which determine and restrict the possible aggregation structures. By using the extended dipole model, the assignment of the spectral peaks observed to different EHO aggregates is shown.

  15. Ion aggregation in high salt solutions. V. Graph entropy analyses of ion aggregate structure and water hydrogen bonding network

    NASA Astrophysics Data System (ADS)

    Choi, Jun-Ho; Cho, Minhaeng

    2016-05-01

    Dissolved ions in water tend to form polydisperse ion aggregates such as ion pairs, relatively compact ion clusters, and even spatially extended ion networks with increasing salt concentration. Combining molecular dynamics simulation and graph theoretical analysis methods, we recently studied morphological structures of ion aggregates with distinctively different characteristics. They can be distinguished from each other by calculating various spectral graph theoretical properties such as eigenvalues and eigenvectors of adjacency matrices of ion aggregates and water hydrogen-bonding networks, minimum path lengths, clustering coefficients, and degree distributions. Here, we focus on percolation and graph entropic properties of ion aggregates and water hydrogen-bonding networks in high salt solutions. Ion network-forming K+ and SCN- ions at high concentrations show a percolating behavior in their aqueous solutions, but ion cluster-forming ions in NaCl solutions do not show such a transition from isolated ion aggregates to percolating ion-water mixture morphology. Despite that the ion aggregate structures are strikingly different for either cluster- or network-forming ions in high salt solutions, it is interesting that the water structures remain insensitive to the electrostatic properties, such as charge densities and polydentate properties, of dissolved ions, and morphological structures of water H-bonding networks appear to be highly robust regardless of the nature and concentration of salt. We anticipate that the present graph entropy analysis results would be of use in understanding a variety of anomalous behaviors of interfacial water around biomolecules as well as electric conductivities of high electrolyte solutions.

  16. Analyses of Cometary Silicate Crystals: DDA Spectral Modeling of Forsterite

    NASA Technical Reports Server (NTRS)

    Wooden, Diane

    2012-01-01

    .14x8.14xl in shape with geometrical factors of x:y:z=1:1:10, Fabian et al. 2001; Harker et al. 2007). Alternatively, models for forsterite employ statistical methods like the Distribution of Hollow Spheres (Min et al. 2008; Oliveira et al. 2011) or Gaussian Random Spheres (GRS) or RGF (Gielen et al. 200S). Pancakes, hollow spheres, or GRS shapes similar to wheat sheaf crystal habit (e.g., Volten et al. 2001; Veihelmann et al. 2006), however, do not have the sharp edges, flat faces, and vertices seen in images of cometary crystals in interplanetary dust particles (IDPs) or in Stardust samples. Cometary forsterite crystals often have equant or tabular crystal habit (J. Bradley). To simulate cometary crystals, we have computed absorption efficiencies of forsterite using the Discrete Dipole Approximation (DDA) DDSCAT code on NAS supercomputers. We compute thermal models that employ a size distribution of discrete irregularly shaped forsterite crystals (nonspherical shapes with faces and vertices) to explore how crystal shape affects the shape and wavelength positions of the forsterite spectral features and to explore whether cometary crystal shapes support either condensation or annealing scenarios (Lindsay et al. 2012a, b). We find forsterite crystal shapes that best-fit comet Hale-Bopp are tetrahedron, bricks or brick platelets, essentially equant or tabular (Lindsay et al. 2012a,b), commensurate with high temperature condensation experiments (Kobatake et al. 2008). We also have computed porous aggregates with crystal monomers and find that the crystal resonances are amplified. i.e., the crystalline fraction is lower in the aggregate than is derived by fitting a linear mix of spectral features from discrete subcomponents, and the crystal resonances 'appear' to be from larger crystals (Wooden et al. 2012). These results may indicate that the crystalline mass fraction in comets with comae dominated by aggregates may be lower than deduced by popular methods that only emoy

  17. Multiway spectral community detection in networks

    NASA Astrophysics Data System (ADS)

    Zhang, Xiao; Newman, Mark

    Spectral methods are widely used for community detection in networks because of their high efficiency and amenability to formal analysis. However, spectral algorithms have been limited to the division of networks into only two or three communities. Here we present a spectral algorithm that can directly divide a network into any number of communities. The algorithm makes use of a mapping from modularity maximization to a vector partitioning problem, combined with a fast heuristic for vector partitioning. We compare the performance of this spectral algorithm with previous approaches and find it to give superior results. We also give demonstrative applications of the algorithm to real-world networks and find that it produces results in good agreement with expectations for the networks studied.

  18. Spectral Mapping Reconstruction of Extended Sources

    NASA Astrophysics Data System (ADS)

    Smith, J. D. T.; Armus, L.; Dale, D. A.; Roussel, H.; Sheth, K.; Buckalew, B. A.; Jarrett, T. H.; Helou, G.; Kennicutt, R. C., Jr.

    2007-10-01

    Three-dimensional spectroscopy of extended sources is typically performed with dedicated integral field spectrographs. We describe a method of reconstructing full spectral cubes, with two spatial and one spectral dimension, from rastered spectral mapping observations employing a single slit in a traditional slit spectrograph. When the background and image characteristics are stable, as is often achieved in space, the use of traditional long slits for integral field spectroscopy can substantially reduce instrument complexity over dedicated integral field designs, without loss of mapping efficiency-particularly compelling when a long-slit mode for single unresolved source follow-up is separately required. We detail a custom flux-conserving cube reconstruction algorithm, discuss issues of extended-source flux calibration, and describe CUBISM, a tool that implements these methods for spectral maps obtained with the Spitzer Space Telescope's Infrared Spectrograph.

  19. A quadtree-adaptive spectral wave model

    NASA Astrophysics Data System (ADS)

    Popinet, Stéphane; Gorman, Richard M.; Rickard, Graham J.; Tolman, Hendrik L.

    A spectral wave model coupling a quadtree-adaptive discretisation of the two spatial dimensions with a standard discretisation of the two spectral dimensions is described. The implementation is greatly simplified by reusing components of the Gerris solver (for spatial advection on quadtrees) and WAVEWATCH III (for spectral advection and source terms). Strict equivalence between the anisotropic diffusion and spatial filtering methods for alleviation of the Garden Sprinkler Effect (GSE) is demonstrated. This equivalence facilitates the generalisation of GSE alleviation techniques to quadtree grids. For the case of a cyclone-generated wave field, the cost of the adaptive method increases linearly with spatial resolution compared to quadratically for constant-resolution methods. This leads to decrease in runtimes of one to two orders of magnitude for practical spatial resolutions. Similar efficiency gains are shown to be possible for global spectral wave forecasting.

  20. Preconditioners for the spectral multigrid method

    NASA Technical Reports Server (NTRS)

    Phillips, T. N.; Zang, T. A.; Hussaini, M. Y.

    1983-01-01

    The systems of algebraic equations which arise from spectral discretizations of elliptic equations are full and direct solutions of them are rarely feasible. Iterative methods are an attractive alternative because Fourier transform techniques enable the discrete matrix-vector products to be computed with nearly the same efficiency as is possible for corresponding but sparse finite difference discretizations. For realistic Dirichlet problems preconditioning is essential for acceptable convergence rates. A brief description of Chebyshev spectral approximations and spectral multigrid methods for elliptic problems is given. A survey of preconditioners for Dirichlet problems based on second-order finite difference methods is made. New preconditioning techniques based on higher order finite differences and on the spectral matrix itself are presented. The preconditioners are analyzed in terms of their spectra and numerical examples are presented.

  1. Preconditioners for the spectral multigrid method

    NASA Technical Reports Server (NTRS)

    Phillips, T. N.; Hussaini, M. Y.; Zang, T. A.

    1986-01-01

    The systems of algebraic equations which arise from spectral discretizations of elliptic equations are full and direct solutions of them are rarely feasible. Iterative methods are an attractive alternative because Fourier transform techniques enable the discrete matrix-vector products to be computed with nearly the same efficiency as is possible for corresponding but sparse finite difference discretizations. For realistic Dirichlet problem preconditioning is essential for acceptable convergence rates. A brief description of Chebyshev spectral approximations and spectral multigrid methods for elliptic problems is given. A survey of preconditioners for Dirichlet problems based on second-order finite difference methods is made. New preconditioning techniques based on higher order finite differences and on the spectral matrix itself are presented. The preconditioners are analyzed in terms of their spectra and numerical examples are presented.

  2. Secondary Ion Mass Spectrometry Imaging of Dictyostelium discoideum Aggregation Streams

    PubMed Central

    DeBord, John Daniel; Smith, Donald F.; Anderton, Christopher R.; Heeren, Ron M. A.; Paša-Tolić, Ljiljana; Gomer, Richard H.; Fernandez-Lima, Francisco A.

    2014-01-01

    High resolution imaging mass spectrometry could become a valuable tool for cell and developmental biology, but both, high spatial and mass spectral resolution are needed to enable this. In this report, we employed Bi3 bombardment time-of-flight (Bi3 ToF-SIMS) and C60 bombardment Fourier transform ion cyclotron resonance secondary ion mass spectrometry (C60 FTICR-SIMS) to image Dictyostelium discoideum aggregation streams. Nearly 300 lipid species were identified from the aggregation streams. High resolution mass spectrometry imaging (FTICR-SIMS) enabled the generation of multiple molecular ion maps at the nominal mass level and provided good coverage for fatty acyls, prenol lipids, and sterol lipids. The comparison of Bi3 ToF-SIMS and C60 FTICR-SIMS suggested that while the first provides fast, high spatial resolution molecular ion images, the chemical complexity of biological samples warrants the use of high resolution analyzers for accurate ion identification. PMID:24911189

  3. Secondary ion mass spectrometry imaging of Dictyostelium discoideum aggregation streams.

    PubMed

    DeBord, John Daniel; Smith, Donald F; Anderton, Christopher R; Heeren, Ron M A; Paša-Tolić, Ljiljana; Gomer, Richard H; Fernandez-Lima, Francisco A

    2014-01-01

    High resolution imaging mass spectrometry could become a valuable tool for cell and developmental biology, but both, high spatial and mass spectral resolution are needed to enable this. In this report, we employed Bi3 bombardment time-of-flight (Bi3 ToF-SIMS) and C60 bombardment Fourier transform ion cyclotron resonance secondary ion mass spectrometry (C60 FTICR-SIMS) to image Dictyostelium discoideum aggregation streams. Nearly 300 lipid species were identified from the aggregation streams. High resolution mass spectrometry imaging (FTICR-SIMS) enabled the generation of multiple molecular ion maps at the nominal mass level and provided good coverage for fatty acyls, prenol lipids, and sterol lipids. The comparison of Bi3 ToF-SIMS and C60 FTICR-SIMS suggested that while the first provides fast, high spatial resolution molecular ion images, the chemical complexity of biological samples warrants the use of high resolution analyzers for accurate ion identification.

  4. Secondary Ion Mass Spectrometry Imaging of Dictyostelium discoideum Aggregation Streams

    SciTech Connect

    Debord, J. Daniel; Smith, Donald F.; Anderton, Christopher R.; Heeren, Ronald M.; Pasa-Tolic, Ljiljana; Gomer, Richard H.; Fernandez-Lima, Francisco A.

    2014-06-09

    High resolution imaging mass spectrometry could become a valuable tool for cell and developmental biology, but both, high spatial and mass spectral resolution are needed to enable this. In this report, we employed Bi3 bombardment time-of-flight (Bi3 ToF-SIMS) and C60 bombardment Fourier transform ion cyclotron resonance secondary ion mass spectrometry (C60 FTICR-SIMS) to image Dictyostelium discoideum aggregation streams. Nearly 300 lipid species were identified from the aggregation streams. High resolution mass spectrometry imaging (FTICR-SIMS) enabled the generation of multiple molecular ion maps at the nominal mass level and provided good coverage for fatty acyls, prenol lipids, and sterol lipids. The comparison of Bi3 ToF-SIMS and C60 FTICR-SIMS suggested that while the first provides fast, high spatial resolution molecular ion images, the chemical complexity of biological samples warrants the use of high resolution analyzers for accurate ion identification.

  5. Stable J-aggregation enabled dual photoacoustic and fluorescence nanoparticles for intraoperative cancer imaging.

    PubMed

    Shakiba, Mojdeh; Ng, Kenneth K; Huynh, Elizabeth; Chan, Harley; Charron, Danielle M; Chen, Juan; Muhanna, Nidal; Foster, F Stuart; Wilson, Brian C; Zheng, Gang

    2016-07-01

    J-aggregates display nanoscale optical properties which enable their use in fluorescence and photoacoustic imaging applications. However, control over their optical properties in an in vivo setting is hampered by the conformational lability of the J-aggregate structure in complex biological environments. J-aggregating nanoparticles (JNP) formed by self-assembly of bacteriopheophorbide-lipid (Bchl-lipid) in lipid nanovesicles represents a novel strategy to stabilize J-aggregates for in vivo bioimaging applications. We find that 15 mol% Bchl-lipid embedded within a saturated phospholipid bilayer vesicle was optimal in terms of maximizing Bchl-lipid dye loading, while maintaining a spherical nanoparticle morphology and retaining spectral properties characteristic of J-aggregates. The addition of cholesterol maintains the stability of the J-aggregate absorption band for up to 6 hours in the presence of 90% FBS. In a proof-of-concept experiment, we successfully applied JNPs as a fluorescence contrast agent for real-time intraoperative detection of metastatic lymph nodes in a rabbit head-and-neck cancer model. Lymph node metastasis delineation was further verified by visualizing the JNP within the excised lymph node using photoacoustic imaging. Using JNPs, we demonstrate the possibility of using J-aggregates as fluorescence and photoacoustic contrast agents and may potentially spur the development of other nanomaterials that can stably induce J-aggregation for in vivo cancer bioimaging applications.

  6. Adaptive aggregation method for the Chemical Master Equation.

    PubMed

    Zhang, Jingwei; Watson, Layne T; Cao, Yang

    2009-01-01

    One important aspect of biological systems such as gene regulatory networks and protein-protein interaction networks is the stochastic nature of interactions between chemical species. Such stochastic behaviour can be accurately modelled by the Chemical Master Equation (CME). However, the CME usually imposes intensive computational requirements when used to characterise molecular biological systems. The major challenge comes from the curse of dimensionality, which has been tackled by a few research papers. The essential goal is to aggregate the system efficiently with limited approximation errors. This paper presents an adaptive way to implement the aggregation process using information collected from Monte Carlo simulations. Numerical results show the effectiveness of the proposed algorithm.

  7. Partial Kernelization for Rank Aggregation: Theory and Experiments

    NASA Astrophysics Data System (ADS)

    Betzler, Nadja; Bredereck, Robert; Niedermeier, Rolf

    Rank Aggregation is important in many areas ranging from web search over databases to bioinformatics. The underlying decision problem Kemeny Score is NP-complete even in case of four input rankings to be aggregated into a "median ranking". We study efficient polynomial-time data reduction rules that allow us to find optimal median rankings. On the theoretical side, we improve a result for a "partial problem kernel" from quadratic to linear size. On the practical side, we provide encouraging experimental results with data based on web search and sport competitions, e.g., computing optimal median rankings for real-world instances with more than 100 candidates within milliseconds.

  8. Scaling the Pseudo-Spectral Mountain: Spherical Anelasticity at 10,000 Cores

    NASA Astrophysics Data System (ADS)

    Featherstone, N. A.

    2012-12-01

    The last decade has witnessed a blossoming in the use of numerical simulations to examine global-scale dynamo processes operating in stellar convection zones. Increasing availability of computational resources has allowed many insights into these phenomena to be gained through the wide application of the Anelastic Spherical Harmonic (ASH) code in particular. ASH has been applied extensively to the study of solar-like stars; most notably to the various dynamo states attainable within such stars and to the processes that drive and maintain the solar differential rotation. Its application has also provided a window into the inner workings of convection zones with a decidedly less shellular geometry, such as the fully convective, low-mass M stars, or the convective cores of high-mass A- and B-type stars. ASH solves the anelastic MHD equations within a pseudo-spectral framework, employing a spherical harmonic decomposition on spherical shells and either a Chebyshev polynomial or finite-difference formulation in the radial direction. The spectral transforms associated with the pseudo-spectral treatment, and the inherent Poisson solve arising from the anelastic formulation, imply that ASH suffers from the same communication drawbacks associated with many other pseudo-spectral methods. Historically, the efficient application of this code has been limited to the use of roughly 2000 cores for problems with 10243 gridpoints, but recently, a thorough restructuring of ASH has allowed for strong scaling of 10243 class problems out to 17,000 cores. These improvements in scalability arise primarily from a careful load balancing of the Poisson solve and its associated communication pathways, as well as from aggregation of the spectral transform communication. I will discuss in detail the current implementation of ASH, accomplished entirely with MPI, and then touch on why an OpenMP hybridization (recently successful in some pseudo-spectral applications) seems unlikely to yield

  9. Analysis of aggregation of platelets in thrombosis

    NASA Astrophysics Data System (ADS)

    Ahuja, Suresh

    Platelets are key players in thrombus formation by first rolling over collagen bound von Willebrand factor followed by formation of a stable interaction with collagen. The first adhered platelets bind additional platelets until the whole injury is sealed off by a platelet aggregate. The coagulation system stabilizes the formed platelet plug by creating a tight fibrin network, and then wound contraction takes place because of morphological changes in platelets. Coagulation takes place by platelet activation and aggregation mainly through fibrinogen polymerization into fibrin fibers. The process includes multiple factors, such as thrombin, plasmin, and local shear-rate which regulate and control the process. Coagulation can be divided into two pathways: the intrinsic pathway and the extrinsic pathway. The intrinsic pathway is initiated by the exposure of a negatively charged. It is able to activate factor XII, using a complex reaction that includes prekallikrein and high-molecular-weight kininogen as cofactors.. Thrombin is the final enzyme that is needed to convert fibrinogen into fibrin. The extrinsic pathway starts with the exposure of tissue factor to the circulating blood, which is the major initiator of coagulation. There are several feedback loops that reinforce the coagulation cascade, resulting in large amounts of thrombin. It is dependent on the presence of pro-coagulant surfaces of cells expressing negatively charged phospholipids--which include phosphatidylserine (PS)--on their outer membrane. PS-bearing surfaces are able to increase the efficiency of the reactions by concentrating and co-localizing coagulation factors.. Aggregation of platelets are analyzed and compared to adhesion of platelet to erythrocyte and to endothelial cells. This abstract is replacing MAR16-2015-020003.

  10. Spectrally nonselective holographic objective

    NASA Astrophysics Data System (ADS)

    Wardosanidze, Zurab V.

    1991-10-01

    Reflection holograms and holographic optical elements fabricated by the Denisyuk method are spectrally selective. In certain applications there may be a need for the development of holographic structures that are not selective in terms of the spectral composition of the reconstructing light. This paper describes the possibility of creating spectral nonselective optical elements and reflection holograms on a dichromate gelatin layer (DGL). The essential condition for achieving nonselectivity in this case is a strong absorption of actinic radiation in the initial emulsion layer conditioning the strongly damping character of the summary field in thickness.

  11. Studies on recycled aggregates-based concrete.

    PubMed

    Rakshvir, Major; Barai, Sudhirkumar V

    2006-06-01

    Reduced extraction of raw materials, reduced transportation cost, improved profits, reduced environmental impact and fast-depleting reserves of conventional natural aggregates has necessitated the use of recycling, in order to be able to conserve conventional natural aggregate. In this study various physical and mechanical properties of recycled concrete aggregates were examined. Recycled concrete aggregates are different from natural aggregates and concrete made from them has specific properties. The percentages of recycled concrete aggregates were varied and it was observed that properties such as compressive strength showed a decrease of up to 10% as the percentage of recycled concrete aggregates increased. Water absorption of recycled aggregates was found to be greater than natural aggregates, and this needs to be compensated during mix design.

  12. RAGG - R EPISODIC AGGREGATION PACKAGE

    EPA Science Inventory

    The RAGG package is an R implementation of the CMAQ episodic model aggregation method developed by Constella Group and the Environmental Protection Agency. RAGG is a tool to provide climatological seasonal and annual deposition of sulphur and nitrogen for multimedia management. ...

  13. Cyclosporine A enhances platelet aggregation.

    PubMed

    Grace, A A; Barradas, M A; Mikhailidis, D P; Jeremy, J Y; Moorhead, J F; Sweny, P; Dandona, P

    1987-12-01

    In view of the reported increase in thromboembolic episodes following cyclosporine A (CyA) therapy, the effect of this drug on platelet aggregation and thromboxane A2 release was investigated. The addition of CyA, at therapeutic concentrations to platelet rich plasma from normal subjects in vitro was found to increase aggregation in response to adrenaline, collagen and ADP. Ingestion of CyA by healthy volunteers was also associated with enhanced platelet aggregation. The CyA-mediated enhancement of aggregation was further enhanced by the addition in vitro of therapeutic concentrations of heparin. Platelets from renal allograft recipients treated with CyA also showed hyperaggregability and increased thromboxane A2 release, which were most marked at "peak" plasma CyA concentration and less so at "trough" concentrations. Platelet hyperaggregability in renal allograft patients on long-term CyA therapy tended to revert towards normal following the replacement of CyA with azathioprine. Hypertensive patients with renal allografts on nifedipine therapy had normal platelet function and thromboxane release in spite of CyA therapy. These observations suggest that CyA-mediated platelet activation may contribute to the pathogenesis of the thromboembolic phenomena associated with the use of this drug. The increased release of thromboxane A2 (a vasoconstrictor) may also play a role in mediating CyA-related nephrotoxicity.

  14. Aggregation-fragmentation processes and decaying three-wave turbulence.

    PubMed

    Connaughton, Colm; Krapivsky, P L

    2010-03-01

    We use a formal correspondence between the isotropic three-wave kinetic equation and the rate equations for a nonlinear fragmentation-aggregation process to study the wave frequency power spectrum of decaying three-wave turbulence in the infinite capacity regime. We show that the transient spectral exponent is lambda+1 , where lambda is the degree of homogeneity of the wave interaction kernel and derive a formula for the decay amplitude. When lambda=0 the transient exponent coincides with the thermodynamic equilibrium exponent leading to logarithmic corrections to scaling which we calculate explicitly for the case of constant interaction kernel.

  15. Sequence-dependent Internalization of Aggregating Peptides*

    PubMed Central

    Couceiro, José R.; Gallardo, Rodrigo; De Smet, Frederik; De Baets, Greet; Baatsen, Pieter; Annaert, Wim; Roose, Kenny; Saelens, Xavier; Schymkowitz, Joost; Rousseau, Frederic

    2015-01-01

    Recently, a number of aggregation disease polypeptides have been shown to spread from cell to cell, thereby displaying prionoid behavior. Studying aggregate internalization, however, is often hampered by the complex kinetics of the aggregation process, resulting in the concomitant uptake of aggregates of different sizes by competing mechanisms, which makes it difficult to isolate pathway-specific responses to aggregates. We designed synthetic aggregating peptides bearing different aggregation propensities with the aim of producing modes of uptake that are sufficiently distinct to differentially analyze the cellular response to internalization. We found that small acidic aggregates (≤500 nm in diameter) were taken up by nonspecific endocytosis as part of the fluid phase and traveled through the endosomal compartment to lysosomes. By contrast, bigger basic aggregates (>1 μm) were taken up through a mechanism dependent on cytoskeletal reorganization and membrane remodeling with the morphological hallmarks of phagocytosis. Importantly, the properties of these aggregates determined not only the mechanism of internalization but also the involvement of the proteostatic machinery (the assembly of interconnected networks that control the biogenesis, folding, trafficking, and degradation of proteins) in the process; whereas the internalization of small acidic aggregates is HSF1-independent, the uptake of larger basic aggregates was HSF1-dependent, requiring Hsp70. Our results show that the biophysical properties of aggregates determine both their mechanism of internalization and proteostatic response. It remains to be seen whether these differences in cellular response contribute to the particular role of specific aggregated proteins in disease. PMID:25391649

  16. Security Analysis of the Unrestricted Identity-Based Aggregate Signature Scheme

    PubMed Central

    Lee, Kwangsu; Lee, Dong Hoon

    2015-01-01

    Aggregate signatures allow anyone to combine different signatures signed by different signers on different messages into a short signature. An ideal aggregate signature scheme is an identity-based aggregate signature (IBAS) scheme that supports full aggregation since it can reduce the total transmitted data by using an identity string as a public key and anyone can freely aggregate different signatures. Constructing a secure IBAS scheme that supports full aggregation in bilinear maps is an important open problem. Recently, Yuan et al. proposed such a scheme and claimed its security in the random oracle model under the computational Diffie-Hellman assumption. In this paper, we show that there is an efficient forgery on their IBAS scheme and that their security proof has a serious flaw. PMID:25993247

  17. Soil spectral characterization

    NASA Technical Reports Server (NTRS)

    Stoner, E. R.; Baumgardner, M. F.

    1981-01-01

    The spectral characterization of soils is discussed with particular reference to the bidirectional reflectance factor as a quantitative measure of soil spectral properties, the role of soil color, soil parameters affecting soil reflectance, and field characteristics of soil reflectance. Comparisons between laboratory-measured soil spectra and Landsat MSS data have shown good agreement, especially in discriminating relative drainage conditions and organic matter levels in unvegetated soils. The capacity to measure both visible and infrared soil reflectance provides information on other soil characteristics and makes it possible to predict soil response to different management conditions. Field and laboratory soil spectral characterization helps define the extent to which intrinsic spectral information is available from soils as a consequence of their composition and field characteristics.

  18. An Aggregation Advisor for Ligand Discovery.

    PubMed

    Irwin, John J; Duan, Da; Torosyan, Hayarpi; Doak, Allison K; Ziebart, Kristin T; Sterling, Teague; Tumanian, Gurgen; Shoichet, Brian K

    2015-09-10

    Colloidal aggregation of organic molecules is the dominant mechanism for artifactual inhibition of proteins, and controls against it are widely deployed. Notwithstanding an increasingly detailed understanding of this phenomenon, a method to reliably predict aggregation has remained elusive. Correspondingly, active molecules that act via aggregation continue to be found in early discovery campaigns and remain common in the literature. Over the past decade, over 12 thousand aggregating organic molecules have been identified, potentially enabling a precedent-based approach to match known aggregators with new molecules that may be expected to aggregate and lead to artifacts. We investigate an approach that uses lipophilicity, affinity, and similarity to known aggregators to advise on the likelihood that a candidate compound is an aggregator. In prospective experimental testing, five of seven new molecules with Tanimoto coefficients (Tc's) between 0.95 and 0.99 to known aggregators aggregated at relevant concentrations. Ten of 19 with Tc's between 0.94 and 0.90 and three of seven with Tc's between 0.89 and 0.85 also aggregated. Another three of the predicted compounds aggregated at higher concentrations. This method finds that 61 827 or 5.1% of the ligands acting in the 0.1 to 10 μM range in the medicinal chemistry literature are at least 85% similar to a known aggregator with these physical properties and may aggregate at relevant concentrations. Intriguingly, only 0.73% of all drug-like commercially available compounds resemble the known aggregators, suggesting that colloidal aggregators are enriched in the literature. As a percentage of the literature, aggregator-like compounds have increased 9-fold since 1995, partly reflecting the advent of high-throughput and virtual screens against molecular targets. Emerging from this study is an aggregator advisor database and tool ( http://advisor.bkslab.org ), free to the community, that may help distinguish between

  19. Bacterial colonization and extinction on marine aggregates: stochastic model of species presence and abundance

    PubMed Central

    Kramer, Andrew M; Lyons, M Maille; Dobbs, Fred C; Drake, John M

    2013-01-01

    Organic aggregates provide a favorable habitat for aquatic microbes, are efficiently filtered by shellfish, and may play a major role in the dynamics of aquatic pathogens. Quantifying this role requires understanding how pathogen abundance in the water and aggregate size interact to determine the presence and abundance of pathogen cells on individual aggregates. We build upon current understanding of the dynamics of bacteria and bacterial grazers on aggregates to develop a model for the dynamics of a bacterial pathogen species. The model accounts for the importance of stochasticity and the balance between colonization and extinction. Simulation results suggest that while colonization increases linearly with background density and aggregate size, extinction rates are expected to be nonlinear on small aggregates in a low background density of the pathogen. Under these conditions, we predict lower probabilities of pathogen presence and reduced abundance on aggregates compared with predictions based solely on colonization. These results suggest that the importance of aggregates to the dynamics of aquatic bacterial pathogens may be dependent on the interaction between aggregate size and background pathogen density, and that these interactions are strongly influenced by ecological interactions and pathogen traits. The model provides testable predictions and can be a useful tool for exploring how species-specific differences in pathogen traits may alter the effect of aggregates on disease transmission. PMID:24340173

  20. Investigation of the hydrodynamic behavior of diatom aggregates using particle image velocimetry.

    PubMed

    Xiao, Feng; Li, Xiaoyan; Lam, Kitming; Wang, Dongsheng

    2012-01-01

    The hydrodynamic behavior of diatom aggregates has a significant influence on the interactions and flocculation kinetics of algae. However, characterization of the hydrodynamics of diatoms and diatom aggregates in water is rather difficult. In this laboratory study, an advanced visualization technique in particle image velocimetry (PIV) was employed to investigate the hydrodynamic properties of settling diatom aggregates. The experiments were conducted in a settling column filled with a suspension of fluorescent polymeric beads as seed tracers. A laser light sheet was generated by the PIV setup to illuminate a thin vertical planar region in the settling column, while the motions of particles were recorded by a high speed charge-coupled device (CCD) camera. This technique was able to capture the trajectories of the tracers when a diatom aggregate settled through the tracer suspension. The PIV results indicated directly the curvilinear feature of the streamlines around diatom aggregates. The rectilinear collision model largely overestimated the collision areas of the settling particles. Algae aggregates appeared to be highly porous and fractal, which allowed streamlines to penetrate into the aggregate interior. The diatom aggregates have a fluid collection efficiency of 10%-40%. The permeable feature of aggregates can significantly enhance the collisions and flocculation between the aggregates and other small particles including algal cells in water.

  1. Erythrocyte Aggregation due to Surface Nanobubble Interactions During the Onset of Thermal Burn Injury

    NASA Astrophysics Data System (ADS)

    Seidner, Harrison S.

    Red Blood Cell (RBC) aggregation is an important hemorheological phenomenon especially in microcirculation. In healthy individuals, RBCs are known to aggregate and gravitate toward the faster flow in the center of vessels to increase their throughput for more efficient oxygen delivery. Their aggregation is known to occur during a variety of environmental, pathological, and physiological conditions and is reversible when aggregates are subject to the relatively high shear forces in the circulation. The likelihood that aggregates will monodisperse in flow is dependent on the conditions during which they form. In situations where such aggregates are not sheared to monodispersion their presence can impact the perfusion of microvascular networks. More specifically, aggregates subject to the low shear rates in the zone of stasis near regions of thermal burn injury are capable of occluding vessels in the microcirculation and inhibiting the delivery of oxygen and nutrients to tissue downstream. The basic mechanism leading to erythrocyte aggregation at the onset of thermal injury is unknown. This dissertation investigates parameters involved in erythrocyte aggregation, methods of measuring and testing erythrocyte aggregation, and incorporates modeling based on first principles ultimately to propose a mechanism of this phenomenon.

  2. Nebular history of amoeboid olivine aggregates

    NASA Astrophysics Data System (ADS)

    Sugiura, N.; Petaev, M. I.; Kimura, M.; Miyazaki, A.; Hiyagon, H.

    2009-05-01

    Minor element (Ca, Cr, and Mn) concentrations in amoeboid olivine aggregates (AOAs) from primitive chondrites were measured and compared with those predicted by equilibrium condensation in the solar nebula. CaO concentrations in forsterite are low, particularly in porous aggregates. A plausible explanation appears that an equilibrium Ca activity was not maintained during the olivine condensation. CaO and MnO in forsterite are negatively correlated, with CaO being higher in compact aggregates. This suggests that the compact aggregates formed either by a prolonged reheating of the porous aggregates or by condensation and aggregation of forsterite during a very slow cooling in the nebula.

  3. Comments on comet shapes and aggregation processes

    NASA Technical Reports Server (NTRS)

    Hartmann, William K.

    1989-01-01

    An important question for a comet mission is whether comet nuclei preserve information clarifying aggregation processes of planetary matter. New observational evidence shows that Trojan asteroids, as a group, display a higher fraction of highly-elongated objects than the belt. More recently evidence has accumulated that comet nuclei, as a group, also display highly-elongated shapes at macro-scale. This evidence comes from the several comets whose nuclear lightcurves or shapes have been well studied. Trojans and comet nuclei share other properties. Both groups have extremely low albedos and reddish-to neutral-black colors typical of asteroids of spectral class D, P, and C. Both groups may have had relatively low collision frequencies. An important problem to resolve with spacecraft imaging is whether these elongated shapes are primordial, or due to evolution of the objects. Two hypotheses that might be tested by a combination of global-scale and close-up imaging from various directions are: (1) The irregular shapes are primordial and related to the fact that these bodies have had lower collision frequencies than belt asteroids; or (2) The irregular shapes may be due to volatile loss.

  4. Effect of sodium chloride on the binding of polyaromatic hydrocarbon guests with sodium cholate aggregates.

    PubMed

    Fuentealba, Denis; Thurber, Katie; Bovero, Enrico; Pace, Tamara C S; Bohne, Cornelia

    2011-09-01

    Sodium cholate aggregates are adaptable host systems. The effect of changing the ionic strength with the addition of NaCl on the properties for guest binding to sodium cholate aggregates was investigated by using pyrene, perylene and 1-ethylnaphthalene as guests. Fluorescence, anisotropy and laser flash photolysis studies provided information on the protection efficiency of the aggregate bound guest, and provided information on the dynamics and correlation times for the host-guest system. Different trends for the protection efficiency of the bound guests were observed when the NaCl concentration was raised depending on the charge of the aqueous solubilized quencher. The increase in ionic strength was also shown to lengthen the correlation time of the aggregate bound guest and led to faster dynamics for the host-guest complex. These results show that the properties of sodium cholate aggregates as a supramolecular host system are significantly altered with changes in the ionic strength of the medium. PMID:21472184

  5. Graphene quantum dots for the inhibition of β amyloid aggregation

    NASA Astrophysics Data System (ADS)

    Liu, Yibiao; Xu, Li-Ping; Dai, Wenhao; Dong, Haifeng; Wen, Yongqiang; Zhang, Xueji

    2015-11-01

    The aggregation of Aβ peptides is a crucial factor leading to Alzheimer's disease (AD). Inhibiting the Aβ peptide aggregation has become one of the most essential strategies to treat AD. In this work, efficient and low-cytotoxicity inhibitors, graphene quantum dots (GQDs) are reported for their application in inhibiting the aggregation of Aβ peptides. Compared to other carbon materials, the low cytotoxicity and great biocompatibility of GQDs give an advantage to the clinical research for AD. In addition, the GQDs may cross the blood-brain barrier (BBB) because of the small size. It is believed that GQDs may be therapeutic agents against AD. This work provides a novel insight into the development of Alzheimer's drugs.The aggregation of Aβ peptides is a crucial factor leading to Alzheimer's disease (AD). Inhibiting the Aβ peptide aggregation has become one of the most essential strategies to treat AD. In this work, efficient and low-cytotoxicity inhibitors, graphene quantum dots (GQDs) are reported for their application in inhibiting the aggregation of Aβ peptides. Compared to other carbon materials, the low cytotoxicity and great biocompatibility of GQDs give an advantage to the clinical research for AD. In addition, the GQDs may cross the blood-brain barrier (BBB) because of the small size. It is believed that GQDs may be therapeutic agents against AD. This work provides a novel insight into the development of Alzheimer's drugs. Electronic supplementary information (ESI) available: Dose-dependent inhibition of Aβ1-42 fibrillization by GQDs; the photoluminescence spectra of all five GQDs with different charges in water/ethanol; TEM images of other four GQDs with different charges. See DOI: 10.1039/c5nr06282a

  6. Effect of polymer aggregation on the open circuit voltage in organic photovoltaic cells: aggregation-induced conjugated polymer gel and its application for preventing open circuit voltage drop.

    PubMed

    Kim, Bong-Gi; Jeong, Eun Jeong; Park, Hui Joon; Bilby, David; Guo, L Jay; Kim, Jinsang

    2011-03-01

    To investigate the structure-dependent aggregation behavior of conjugated polymers and the effect of aggregation on the device performance of conjugated polymer photovoltaic cells, new conjugated polymers (PVTT and CN-PVTT) having the same regioregularity but different intermolecular packing were prepared and characterized by means of UV-vis spectroscopy and atomic force microscopy (AFM). Photovoltaic devices were prepared with these polymers under different polymer-aggregate conditions. Polymer aggregation induced by thermal annealing increases the short circuit current but provides no advantage in the overall power conversion efficiency because of a decrease in the open circuit voltage. The device fabricated from a pre-aggregated polymer suspension, acquired from ultrasonic agitation of a conjugated polymer gel, showed enhanced performance because of better phase separation and reduced recombination between polymer/PCBM.

  7. Aggregation-Induced Emission Mechanism of Dimethoxy-Tetraphenylethylene in Water Solution: Molecular Dynamics and QM/MM Investigations.

    PubMed

    Sun, Guangxu; Zhao, Yi; Liang, WanZhen

    2015-05-12

    Molecular dynamics simulations and combined quantum mechanics and molecular mechanics calculations are employed to investigate dimethoxy-tetraphenylethylene (DMO-TPE) molecules in water solution for their detailed aggregation process and the mechanism of aggregation-induced emission. The molecular dynamics simulations show that the aggregates start to appear in the nanosecond time scale, and small molecular aggregates appear at low concentration; whereas the large aggregates with a chain-type structure appear at high concentration, and the intramolecular rotation is largely restricted by a molecular aggregated environment. The average radical distribution demonstrates that the waters join the aggregation process and that two types of hydrogen bonds between DMO-TPE and water molecules are built with the peaks at about 0.5 and 0.7 nm, respectively. The spectral features further reveal that the aggregates dominantly present J-type aggregation although they fluctuate between J-type and H-type at a given temperature. The statistical absorption, emission spectra, and the aggregation-induced emission enhancement with respect to the solution concentration agree well with the experimental measurements, indicating the significant effect of molecular environments on the molecular properties. PMID:26574424

  8. Role of streams in myxobacteria aggregate formation

    NASA Astrophysics Data System (ADS)

    Kiskowski, Maria A.; Jiang, Yi; Alber, Mark S.

    2004-10-01

    Cell contact, movement and directionality are important factors in biological development (morphogenesis), and myxobacteria are a model system for studying cell-cell interaction and cell organization preceding differentiation. When starved, thousands of myxobacteria cells align, stream and form aggregates which later develop into round, non-motile spores. Canonically, cell aggregation has been attributed to attractive chemotaxis, a long range interaction, but there is growing evidence that myxobacteria organization depends on contact-mediated cell-cell communication. We present a discrete stochastic model based on contact-mediated signaling that suggests an explanation for the initialization of early aggregates, aggregation dynamics and final aggregate distribution. Our model qualitatively reproduces the unique structures of myxobacteria aggregates and detailed stages which occur during myxobacteria aggregation: first, aggregates initialize in random positions and cells join aggregates by random walk; second, cells redistribute by moving within transient streams connecting aggregates. Streams play a critical role in final aggregate size distribution by redistributing cells among fewer, larger aggregates. The mechanism by which streams redistribute cells depends on aggregate sizes and is enhanced by noise. Our model predicts that with increased internal noise, more streams would form and streams would last longer. Simulation results suggest a series of new experiments.

  9. Aggregation and deposition behavior of boron nanoparticles in porous media.

    PubMed

    Liu, Xuyang; Wazne, Mahmoud; Christodoulatos, Christos; Jasinkiewicz, Kristin L

    2009-02-01

    New kinds of solid fuels and propellants comprised of nanomaterials are making their way into civilian and military applications yet the impact of their release on the environment remains largely unknown. One such material is nano boron, a promising solid fuel and propellant. The fate and transport of nano boron under various aquatic systems was investigated in aggregation and deposition experiments. Column experiments were performed to examine the effects of electrolyte concentration and flow velocity on the transport of boron nanoparticles under saturated conditions, whereas aggregation tests were conducted to assess the effects of electrolytes on the aggregation of the boron nanoparticles. Aggregation tests indicated the presence of different reaction-controlled and diffusion-controlled regimes and yielded critical coagulation concentrations (CCC) of 200 mM, 0.7 mM and 1.5 mM for NaCl, CaCl(2), and MgCl(2), respectively. Aggregation and deposition experimental data corresponded with the classic Derjaguin-Landau-Verwey-Overbeek (DLVO) model and the constant attachment efficiency filtration model, respectively. Theoretical calculations indicated that both the primary and secondary energy minima play important roles in the deposition of nano boron in sand columns.

  10. Aggregating local image descriptors into compact codes.

    PubMed

    Jégou, Hervé; Perronnin, Florent; Douze, Matthijs; Sánchez, Jorge; Pérez, Patrick; Schmid, Cordelia

    2012-09-01

    This paper addresses the problem of large-scale image search. Three constraints have to be taken into account: search accuracy, efficiency, and memory usage. We first present and evaluate different ways of aggregating local image descriptors into a vector and show that the Fisher kernel achieves better performance than the reference bag-of-visual words approach for any given vector dimension. We then jointly optimize dimensionality reduction and indexing in order to obtain a precise vector comparison as well as a compact representation. The evaluation shows that the image representation can be reduced to a few dozen bytes while preserving high accuracy. Searching a 100 million image data set takes about 250 ms on one processor core.

  11. Protein aggregation in salt solutions

    PubMed Central

    Kastelic, Miha; Kalyuzhnyi, Yurij V.; Hribar-Lee, Barbara; Dill, Ken A.; Vlachy, Vojko

    2015-01-01

    Protein aggregation is broadly important in diseases and in formulations of biological drugs. Here, we develop a theoretical model for reversible protein–protein aggregation in salt solutions. We treat proteins as hard spheres having square-well-energy binding sites, using Wertheim’s thermodynamic perturbation theory. The necessary condition required for such modeling to be realistic is that proteins in solution during the experiment remain in their compact form. Within this limitation our model gives accurate liquid–liquid coexistence curves for lysozyme and γ IIIa-crystallin solutions in respective buffers. It provides good fits to the cloud-point curves of lysozyme in buffer–salt mixtures as a function of the type and concentration of salt. It than predicts full coexistence curves, osmotic compressibilities, and second virial coefficients under such conditions. This treatment may also be relevant to protein crystallization. PMID:25964322

  12. Protein aggregation in salt solutions.

    PubMed

    Kastelic, Miha; Kalyuzhnyi, Yurij V; Hribar-Lee, Barbara; Dill, Ken A; Vlachy, Vojko

    2015-05-26

    Protein aggregation is broadly important in diseases and in formulations of biological drugs. Here, we develop a theoretical model for reversible protein-protein aggregation in salt solutions. We treat proteins as hard spheres having square-well-energy binding sites, using Wertheim's thermodynamic perturbation theory. The necessary condition required for such modeling to be realistic is that proteins in solution during the experiment remain in their compact form. Within this limitation our model gives accurate liquid-liquid coexistence curves for lysozyme and γ IIIa-crystallin solutions in respective buffers. It provides good fits to the cloud-point curves of lysozyme in buffer-salt mixtures as a function of the type and concentration of salt. It than predicts full coexistence curves, osmotic compressibilities, and second virial coefficients under such conditions. This treatment may also be relevant to protein crystallization.

  13. Wavelet analysis of molecular dynamics: Efficient extraction of time-frequency information in ultrafast optical processes

    SciTech Connect

    Prior, Javier; Castro, Enrique; Chin, Alex W.; Almeida, Javier; Huelga, Susana F.; Plenio, Martin B.

    2013-12-14

    New experimental techniques based on nonlinear ultrafast spectroscopies have been developed over the last few years, and have been demonstrated to provide powerful probes of quantum dynamics in different types of molecular aggregates, including both natural and artificial light harvesting complexes. Fourier transform-based spectroscopies have been particularly successful, yet “complete” spectral information normally necessitates the loss of all information on the temporal sequence of events in a signal. This information though is particularly important in transient or multi-stage processes, in which the spectral decomposition of the data evolves in time. By going through several examples of ultrafast quantum dynamics, we demonstrate that the use of wavelets provide an efficient and accurate way to simultaneously acquire both temporal and frequency information about a signal, and argue that this greatly aids the elucidation and interpretation of physical process responsible for non-stationary spectroscopic features, such as those encountered in coherent excitonic energy transport.

  14. Multipurpose spectral imager.

    PubMed

    Sigernes, F; Lorentzen, D A; Heia, K; Svenøe, T

    2000-06-20

    A small spectral imaging system is presented that images static or moving objects simultaneously as a function of wavelength. The main physical principle is outlined and demonstrated. The instrument is capable of resolving both spectral and spatial information from targets throughout the entire visible region. The spectral domain has a bandpass of 12 A. One can achieve the spatial domain by rotating the system's front mirror with a high-resolution stepper motor. The spatial resolution range from millimeters to several meters depends mainly on the front optics used and whether the target is fixed (static) or movable relative to the instrument. Different applications and examples are explored, including outdoor landscapes, industrial fish-related targets, and ground-level objects observed in the more traditional way from an airborne carrier (remote sensing). Through the examples, we found that the instrument correctly classifies whether a shrimp is peeled and whether it can disclose the spectral and spatial microcharacteristics of targets such as a fish nematode (parasite). In the macroregime, we were able to distinguish a marine vessel from the surrounding sea and sky. A study of the directional spectral albedo from clouds, mountains, snow cover, and vegetation has also been included. With the airborne experiment, the imager successfully classified snow cover, leads, and new and rafted ice, as seen from 10.000 ft (3.048 m). PMID:18345245

  15. Multipurpose spectral imager.

    PubMed

    Sigernes, F; Lorentzen, D A; Heia, K; Svenøe, T

    2000-06-20

    A small spectral imaging system is presented that images static or moving objects simultaneously as a function of wavelength. The main physical principle is outlined and demonstrated. The instrument is capable of resolving both spectral and spatial information from targets throughout the entire visible region. The spectral domain has a bandpass of 12 A. One can achieve the spatial domain by rotating the system's front mirror with a high-resolution stepper motor. The spatial resolution range from millimeters to several meters depends mainly on the front optics used and whether the target is fixed (static) or movable relative to the instrument. Different applications and examples are explored, including outdoor landscapes, industrial fish-related targets, and ground-level objects observed in the more traditional way from an airborne carrier (remote sensing). Through the examples, we found that the instrument correctly classifies whether a shrimp is peeled and whether it can disclose the spectral and spatial microcharacteristics of targets such as a fish nematode (parasite). In the macroregime, we were able to distinguish a marine vessel from the surrounding sea and sky. A study of the directional spectral albedo from clouds, mountains, snow cover, and vegetation has also been included. With the airborne experiment, the imager successfully classified snow cover, leads, and new and rafted ice, as seen from 10.000 ft (3.048 m).

  16. Noncomputable Spectral Sets

    NASA Astrophysics Data System (ADS)

    Teutsch, Jason

    2007-01-01

    It is possible to enumerate all computer programs. In particular, for every partial computable function, there is a shortest program which computes that function. f-MIN is the set of indices for shortest programs. In 1972, Meyer showed that f-MIN is Turing equivalent to 0'', the halting set with halting set oracle. This paper generalizes the notion of shortest programs, and we use various measures from computability theory to describe the complexity of the resulting "spectral sets." We show that under certain Godel numberings, the spectral sets are exactly the canonical sets 0', 0'', 0''', ... up to Turing equivalence. This is probably not true in general, however we show that spectral sets always contain some useful information. We show that immunity, or "thinness" is a useful characteristic for distinguishing between spectral sets. In the final chapter, we construct a set which neither contains nor is disjoint from any infinite arithmetic set, yet it is 0-majorized and contains a natural spectral set. Thus a pathological set becomes a bit more friendly. Finally, a number of interesting open problems are left for the inspired reader.

  17. Novel monolayer and bilayer shell aggregate gold nanostructures

    NASA Astrophysics Data System (ADS)

    Angelidou, Myria; Pitris, Costas

    2011-03-01

    Various gold nanostructures are being investigated for medical and biological uses. For many medical applications, it would be beneficial to use near infrared (NIR) excitation as well as small gold nanospheres which can easily reach the cytoplasm and cell nucleus. For that purpose, we propose a novel nanostructure, the "shell aggregate," which consists of small nanospheres aggregated around a core such as an intracellular organelle. The extinction efficiency of such monolayfer and bilayer shell aggregates is thoroughly investigated with appropriate simulations using the Descrete Dipole Approximation (DDA) method. This technique can deal with any arbitrary size, shape, synthesis and external environment. The effect of parameters such as the overall radius of the nanostructure, the small nanosphere radius, and the distance between the nanospheres, on the extinction efficiency factor of the nanostructures was examined. The results indicate that the extinction spectra appear to depend heavily on the distance between the small nanospheres. Finally, the monolayer shell aggregate could be a suitable candidate for use in various biological, intracellular, applications since it provides a reasonably tunable plasmon resonance wavelength while the small size of its components can be exploited for intracellular distribution.

  18. Aggregation of Heterogeneously Charged Colloids.

    PubMed

    Dempster, Joshua M; Olvera de la Cruz, Monica

    2016-06-28

    Patchy colloids are attractive as programmable building blocks for metamaterials. Inverse patchy colloids, in which a charged surface is decorated with patches of the opposite charge, are additionally noteworthy as models for heterogeneously charged biological materials such as proteins. We study the phases and aggregation behavior of a single charged patch in an oppositely charged colloid with a single-site model. This single-patch inverse patchy colloid model shows a large number of phases when varying patch size. For large patch sizes we find ferroelectric crystals, while small patch sizes produce cross-linked gels. Intermediate values produce monodisperse clusters and unusual worm structures that preserve finite ratios of area to volume. The polarization observed at large patch sizes is robust under extreme disorder in patch size and shape. We examine phase-temperature dependence and coexistence curves and find that large patch sizes produce polarized liquids, in contrast to mean-field predictions. Finally, we introduce small numbers of unpatched charged colloids. These can either suppress or encourage aggregation depending on their concentration and the size of the patches on the patched colloids. These effects can be exploited to control aggregation and to measure effective patch size.

  19. Tau Phosphorylation, Aggregation, and Cell Toxicity

    PubMed Central

    Avila, J.; Santa-María, I.; Pérez, M.; Hernández, F.; Moreno, F.

    2006-01-01

    Protein aggregation takes place in many neurodegenerative disorders. However, there is a controversy about the possible toxicity of these protein aggregates. In this review, this controversy is discussed, focussing on the tau aggregation that takes place in those disorders known as tauopathies. PMID:17047313

  20. Mineral resource of the month: aggregates

    USGS Publications Warehouse

    Willett, Jason C.

    2012-01-01

    Crushed stone and construction sand and gravel, the two major types of natural aggregates, are among the most abundant and accessible natural resources on the planet. The earliest civilizations used aggregates for various purposes, mainly construction. Today aggregates provide the basic raw materials for the foundation of modern society.

  1. Spectral detection and monitoring of marine mammals

    NASA Astrophysics Data System (ADS)

    Schoonmaker, Jon; Wells, Tami; Gilbert, Gary; Podobna, Yuliya; Petrosyuk, Irina; Dirbas, Joseph

    2008-04-01

    This note presents an airborne spectral imaging system and methodology used to detect, track and monitor marine mammal populations. The system is a four band multispectral imaging system using spectral bands tailored for maritime imaging. This low cost, low volume, imaging sensor can be deployed on either a small unmanned air vehicle (UAV) or any other cost efficient aircraft. Results of recent multispectral data collects over marine mammals in St. Lawrence Seaway are presented. Species present included beluga whales as well as various species of larger baleen whales.

  2. Temperature-dependent spectral mismatch corrections

    DOE PAGES

    Osterwald, Carl R.; Campanelli, Mark; Moriarty, Tom; Emery, Keith A.; Williams, Rafell

    2015-11-01

    This study develops the mathematical foundation for a translation of solar cell short-circuit current from one thermal and spectral irradiance operating condition to another without the use of ill-defined and error-prone temperature coefficients typically employed in solar cell metrology. Using the partial derivative of quantum efficiency with respect to temperature, the conventional isothermal expression for spectral mismatch corrections is modified to account for changes of current due to temperature; this modification completely eliminates the need for short-circuit-current temperature coefficients. An example calculation is provided to demonstrate use of the new translation.

  3. Dynamical Spectral Unmixing of Multitemporal Hyperspectral Images

    NASA Astrophysics Data System (ADS)

    Henrot, Simon; Chanussot, Jocelyn; Jutten, Christian

    2016-07-01

    In this paper, we consider the problem of unmixing a time series of hyperspectral images. We propose a dynamical model based on linear mixing processes at each time instant. The spectral signatures and fractional abundances of the pure materials in the scene are seen as latent variables, and assumed to follow a general dynamical structure. Based on a simplified version of this model, we derive an efficient spectral unmixing algorithm to estimate the latent variables by performing alternating minimizations. The performance of the proposed approach is demonstrated on synthetic and real multitemporal hyperspectral images.

  4. Interaction of Biologically Active Flavins inside Bile Salt Aggregates: Molecular Level Investigation.

    PubMed

    Maity, Banibrata; Ahmed, Sayeed Ashique; Seth, Debabrata

    2016-09-22

    In this work we have studied the photophysics of biologically active flavin molecule lumichrome (LCM) in different bile-salt aggregates. With alteration of the functional groups of the bile salts, the photophysics of confined fluorophore is largely affected and shows difference in their spectral behavior. This study also reveals the selective prototropic species of LCM present in bile salt aggregates. In the presence of the bile salt aggregates, LCM molecule shows excitation and emission wavelength-dependent emission properties, indicating switch over of the structural change of different prototropic form of the LCM molecule. The observation of higher rotational relaxation time in NaDC aggregates compared to NaTC aggregates clearly reflects that NaDC aggregates are more rigid due to its greater hydrophobicity and large in size, which is capable to bind the guest molecule more into their nanoconfined medium. Moreover, due to less acidic nature, NaDC aggregates have more ability to accept hydrogen bond from the LCM molecule and show the selective formation of isoalloxazine N10 anion (A1 monoanionic form) of LCM. PMID:27557394

  5. Surfactant-induced aggregation patterns of thiazole orange: a photophysical study.

    PubMed

    Choudhury, Sharmistha Dutta; Bhasikuttan, Achikanath C; Pal, Haridas; Mohanty, Jyotirmayee

    2011-10-18

    The aggregation behavior of the DNA marker dye thiazole orange (TO), has been investigated in two types of surfactant assemblies, namely, premicelles/micelles of sodium dodecyl sulfate (SDS) and pre reverse micelles/reverse micelles of sodium bis(2-ethylhexyl) sulfosuccinate (AOT). In the case of an SDS/water system, absorption spectral changes of TO signify the formation of H-aggregates and H-dimers of the dye at premicellar concentrations, which subsequently convert to the monomeric form beyond the critical micellar concentration (cmc). Interestingly, the observed changes in the absorption and emission characteristics due to the surfactant-induced formation of H-aggregates/dimers of TO are found to be useful to estimate the surfactant concentration parameters for premicellar aggregation of SDS. In the case of an AOT/n-heptane system, similarly, H-aggregates/dimers are observed at low AOT concentrations, below the cmc. However, in this case, the H-dimers persist even beyond the cmc. This is attributed to the strong tendency of TO for self-aggregation and its favorable electrostatic interactions with the AOT head groups. With increasing water content in the AOT reverse micelles, the hydration of the dye leads to the conversion of H-dimers to the monomeric form. The steady-state fluorescence results are nicely corroborated with those from time-resolved fluorescence studies and demonstrate the interesting behavior of the surfactant-induced aggregation of TO dye.

  6. Parametric Explosion Spectral Model

    SciTech Connect

    Ford, S R; Walter, W R

    2012-01-19

    Small underground nuclear explosions need to be confidently detected, identified, and characterized in regions of the world where they have never before occurred. We develop a parametric model of the nuclear explosion seismic source spectrum derived from regional phases that is compatible with earthquake-based geometrical spreading and attenuation. Earthquake spectra are fit with a generalized version of the Brune spectrum, which is a three-parameter model that describes the long-period level, corner-frequency, and spectral slope at high-frequencies. Explosion spectra can be fit with similar spectral models whose parameters are then correlated with near-source geology and containment conditions. We observe a correlation of high gas-porosity (low-strength) with increased spectral slope. The relationship between the parametric equations and the geologic and containment conditions will assist in our physical understanding of the nuclear explosion source.

  7. [Study on the arc spectral information for welding quality diagnosis].

    PubMed

    Li, Zhi-Yong; Gu, Xiao-Yan; Li, Huan; Yang, Li-Jun

    2009-03-01

    Through collecting the spectral signals of TIG and MIG welding arc with spectrometer, the arc light radiations were analyzed based on the basic theory of plasma physics. The radiation of welding arc distributes over a broad range of frequency, from infrared to ultraviolet. The arc spectrum is composed of line spectra and continuous spectra. Due to the variation of metal density in the welding arc, there is great difference between the welding arc spectra of TIG and MIG in both their intensity and distribution. The MIG welding arc provides more line spectra of metal and the intensity of radiation is greater than TIG. The arc spectrum of TIG welding is stable during the welding process, disturbance factors that cause the spectral variations can be reflected by the spectral line related to the corresponding element entering the welding arc. The arc spectrum of MIG welding will fluctuate severely due to droplet transfer, which produces "noise" in the line spectrum aggregation zone. So for MIG welding, the spectral zone lacking spectral line is suitable for welding quality diagnosis. According to the characteristic of TIG and MIG, special spectral zones were selected for welding quality diagnosis. For TIG welding, the selected zone is in ultraviolet zone (230-300 nm). For MIG welding, the selected zone is in visible zone (570-590 nm). With the basic theory provided for welding quality diagnosis, the integral intensity of spectral signal in the selected zone of welding process with disturbing factor was studied to prove the theory. The results show that the welding quality and disturbance factors can be diagnosed with good signal to noise ratio in the selected spectral zone compared with signal in other spectral zone. The spectral signal can be used for real-time diagnosis of the welding quality.

  8. Light-scattering changes caused by RBC aggregation: physical basis for new approach to noninvasive blood count

    NASA Astrophysics Data System (ADS)

    Shvartsman, Leonid D.; Fine, Ilya

    2001-06-01

    We develop theoretical models of light transmission through whole blood considering RBC aggregation. RBC aggregates are considered to be the main centers of scattering in red/near- infrared spectral region. In pulsatile blood flow the periodic changes of aggregate geometry cause oscillations of light scattering. Thus scattering-assisted mechanism has to be taken into account in pulse oximeter calibration. In case of over-systolic vessel occlusion the size of aggregates grows, and the light transmission rises. Light diffraction on a single scatterer makes the transmission growth non- monotonic for certain spectral range. For the most typical set of aggregate parameters this range corresponds to wavelengths below 760 nm, and this prediction fits well both in vivo and in vitro experimental results. This spectral range depends on the refraction index mismatch and the geometry of aggregates. Both of them may be affected by the chemistry of blood. For instance, changes of glucose and hemoglobin have different effect on light transmission time response. Consequently, their content may be determined from time evolution of optical transmission.

  9. Amyloid-β aggregation with gold nanoparticles on brain lipid bilayer.

    PubMed

    Lee, Hyojin; Kim, Yuna; Park, Anna; Nam, Jwa-Min

    2014-05-14

    Understanding and manipulating amyloid-β (Aβ) aggregation provide key knowledge and means for the diagnosis and cure of Alzheimer's disease (AD) and the applications of Aβ-based aggregation systems. Here, we studied the formation of various Aβ aggregate structures with gold nanoparticles (AuNPs) and brain total lipid extract-based supported lipid bilayer (brain SLB). The roles of AuNPs and brain SLB in forming Aβ aggregates were studied in real time, and the structural details of Aβ aggregates were monitored and analyzed with the dark-field imaging of plasmonic AuNPs that allows for long-term in situ imaging of Aβ aggregates with great structural details without further labeling. It was shown that the fluid brain SLB platform provides the binding sites for Aβ and drives the fast and efficient formation of Aβ aggregate structures and, importantly, large Aβ plaque structures (>15 μm in diameter), a hallmark for AD, were formed without going through fibril structures when Aβ peptides were co-incubated with AuNPs on the brain SLB. The dark-field scattering and circular dichroism-correlation data suggest that AuNPs were heavily involved with Aβ aggregation on the brain SLB and less α-helix, less β-sheet and more random coil structures were found in large plaque-like Aβ aggregates.

  10. Spectral library searching in proteomics.

    PubMed

    Griss, Johannes

    2016-03-01

    Spectral library searching has become a mature method to identify tandem mass spectra in proteomics data analysis. This review provides a comprehensive overview of available spectral library search engines and highlights their distinct features. Additionally, resources providing spectral libraries are summarized and tools presented that extend experimental spectral libraries by simulating spectra. Finally, spectrum clustering algorithms are discussed that utilize the same spectrum-to-spectrum matching algorithms as spectral library search engines and allow novel methods to analyse proteomics data.

  11. Microwave extinction characteristics of nanoparticle aggregates

    NASA Astrophysics Data System (ADS)

    Wu, Y. P.; Cheng, J. X.; Liu, X. X.; Wang, H. X.; Zhao, F. T.; Wen, W. W.

    2016-07-01

    Structure of nanoparticle aggregates plays an important role in microwave extinction capacity. The diffusion-limited aggregation model (DLA) for fractal growth is utilized to explore the possible structures of nanoparticle aggregates by computer simulation. Based on the discrete dipole approximation (DDA) method, the microwave extinction performance by different nano-carborundum aggregates is numerically analyzed. The effects of the particle quantity, original diameter, fractal structure, as well as orientation on microwave extinction are investigated, and also the extinction characteristics of aggregates are compared with the spherical nanoparticle in the same volume. Numerical results give out that proper aggregation of nanoparticle is beneficial to microwave extinction capacity, and the microwave extinction cross section by aggregated granules is better than that of the spherical solid one in the same volume.

  12. What favors convective aggregation and why?

    NASA Astrophysics Data System (ADS)

    Muller, Caroline; Bony, Sandrine

    2015-07-01

    The organization of convection is ubiquitous, but its physical understanding remains limited. One particular type of organization is the spatial self-aggregation of convection, taking the form of cloud clusters, or tropical cyclones in the presence of rotation. We show that several physical processes can give rise to self-aggregation and highlight the key features responsible for it, using idealized simulations. Longwave radiative feedbacks yield a "radiative aggregation." In that case, sufficient spatial variability of radiative cooling rates yields a low-level circulation, which induces the upgradient energy transport and radiative-convective instability. Not only do vertically integrated radiative budgets matter but the vertical profile of cooling is also crucial. Convective aggregation is facilitated when downdrafts below clouds are weak ("moisture-memory aggregation"), and this is sufficient to trigger aggregation in the absence of longwave radiative feedbacks. These results shed some light on the sensitivity of self-aggregation to various parameters, including resolution or domain size.

  13. Simulation of J-aggregate microcavity photoluminescence

    NASA Astrophysics Data System (ADS)

    Michetti, Paolo; La Rocca, Giuseppe C.

    2008-05-01

    We have developed a model in order to account for the photoexcitation dynamics of J-aggregate films and strongly coupled J-aggregate microcavities. The J aggregates are described as a disordered Frenkel exciton system in which relaxation occurs due to the presence of a thermal bath of molecular vibrations. The correspondence between the photophysics in J-aggregate films and that in J-aggregate microcavities is obtained by introducing a model polariton wave function mixing cavity photon modes and J-aggregate super-radiant excitons. With the same description of the material properties, we have calculated both absorption and luminescence spectra for the J-aggregate film and the photoluminescence of strongly coupled organic microcavities. The model is able to account for the fast relaxation dynamics in organic microcavities following nonresonant pumping and explains the temperature dependence of the ratio between the upper polariton and the lower polariton luminescence.

  14. Changes in fractal dimension during aggregation.

    PubMed

    Chakraborti, Rajat K; Gardner, Kevin H; Atkinson, Joseph F; Van Benschoten, John E

    2003-02-01

    Experiments were performed to evaluate temporal changes in the fractal dimension of aggregates formed during flocculation of an initially monodisperse suspension of latex microspheres. Particle size distributions and aggregate geometrical information at different mixing times were obtained using a non-intrusive optical sampling and digital image analysis technique, under variable conditions of mixing speed, coagulant (alum) dose and particle concentration. Pixel resolution required to determine aggregate size and geometric measures including the fractal dimension is discussed and a quantitative measure of accuracy is developed. The two-dimensional fractal dimension was found to range from 1.94 to 1.48, corresponding to aggregates that are either relatively compact or loosely structured, respectively. Changes in fractal dimension are explained using a conceptual model, which describes changes in fractal dimension associated with aggregate growth and changes in aggregate structure. For aggregation of an initially monodisperse suspension, the fractal dimension was found to decrease over time in the initial stages of floc formation.

  15. LCLS Spectral Flux Viewer

    2005-10-25

    This application (FluxViewer) is a tool for displaying spectral flux data for the Linac Coherent Light Source (LCLS). This tool allows the user to view sliced spatial and energy distributions of the photons selected for specific energies and positions transverse to the beam axis.

  16. Microwave spectral line listing

    NASA Technical Reports Server (NTRS)

    White, W. F., Jr.

    1975-01-01

    The frequency, intensity, and identification of 9615 spectral lines belonging to 75 molecules are tabulated in order of increasing frequency. Measurements for all 75 molecules were made in the frequency range from 26500 to 40000 MHz by a computer controlled spectrometer. Measurements were also made in the 18000 to 26500 MHz range for some of the molecules.

  17. Large Spectral Library Problem

    SciTech Connect

    Chilton, Lawrence K.; Walsh, Stephen J.

    2008-10-03

    Hyperspectral imaging produces a spectrum or vector at each image pixel. These spectra can be used to identify materials present in the image. In some cases, spectral libraries representing atmospheric chemicals or ground materials are available. The challenge is to determine if any of the library chemicals or materials exist in the hyperspectral image. The number of spectra in these libraries can be very large, far exceeding the number of spectral channels collected in the ¯eld. Suppose an image pixel contains a mixture of p spectra from the library. Is it possible to uniquely identify these p spectra? We address this question in this paper and refer to it as the Large Spectral Library (LSL) problem. We show how to determine if unique identi¯cation is possible for any given library. We also show that if p is small compared to the number of spectral channels, it is very likely that unique identi¯cation is possible. We show that unique identi¯cation becomes less likely as p increases.

  18. Spectral imaging using forward-viewing spectrally encoded endoscopy.

    PubMed

    Zeidan, Adel; Yelin, Dvir

    2016-02-01

    Spectrally encoded endoscopy (SEE) enables miniature, small-diameter endoscopic probes for minimally invasive imaging; however, using the broadband spectrum to encode space makes color and spectral imaging nontrivial and challenging. By careful registration and analysis of image data acquired by a prototype of a forward-viewing dual channel spectrally encoded rigid probe, we demonstrate spectral and color imaging within a narrow cylindrical lumen. Spectral imaging of calibration cylindrical test targets and an ex-vivo blood vessel demonstrates high-resolution spatial-spectral imaging with short (10 μs/line) exposure times. PMID:26977348

  19. Spectral imaging using forward-viewing spectrally encoded endoscopy

    PubMed Central

    Zeidan, Adel; Yelin, Dvir

    2016-01-01

    Spectrally encoded endoscopy (SEE) enables miniature, small-diameter endoscopic probes for minimally invasive imaging; however, using the broadband spectrum to encode space makes color and spectral imaging nontrivial and challenging. By careful registration and analysis of image data acquired by a prototype of a forward-viewing dual channel spectrally encoded rigid probe, we demonstrate spectral and color imaging within a narrow cylindrical lumen. Spectral imaging of calibration cylindrical test targets and an ex-vivo blood vessel demonstrates high-resolution spatial-spectral imaging with short (10 μs/line) exposure times. PMID:26977348

  20. Spectral Methods for Magnetic Anomalies

    NASA Astrophysics Data System (ADS)

    Parker, R. L.; Gee, J. S.

    2013-12-01

    Spectral methods, that is, those based in the Fourier transform, have long been employed in the analysis of magnetic anomalies. For example, Schouten and MaCamy's Earth filter is used extensively to map patterns to the pole, and Parker's Fourier transform series facilitates forward modeling and provides an efficient algorithm for inversion of profiles and surveys. From a different, and perhaps less familiar perspective, magnetic anomalies can be represented as the realization of a stationary stochastic process and then statistical theory can be brought to bear. It is vital to incorporate the full 2-D power spectrum, even when discussing profile data. For example, early analysis of long profiles failed to discover the small-wavenumber peak in the power spectrum predicted by one-dimensional theory. The long-wavelength excess is the result of spatial aliasing, when energy leaks into the along-track spectrum from the cross-track components of the 2-D spectrum. Spectral techniques may be used to improve interpolation and downward continuation of survey data. They can also evaluate the reliability of sub-track magnetization models both across and and along strike. Along-strike profiles turn out to be surprisingly good indicators of the magnetization directly under them; there is high coherence between the magnetic anomaly and the magnetization over a wide band. In contrast, coherence is weak at long wavelengths on across-strike lines, which is naturally the favored orientation for most studies. When vector (or multiple level) measurements are available, cross-spectral analysis can reveal the wavenumber interval where the geophysical signal resides, and where noise dominates. One powerful diagnostic is that the phase spectrum between the vertical and along-path components of the field must be constant 90 degrees. To illustrate, it was found that on some very long Project Magnetic lines, only the lowest 10% of the wavenumber band contain useful geophysical signal. In this

  1. Inhomogeneous diffusion-limited aggregation

    NASA Technical Reports Server (NTRS)

    Selinger, Robin Blumberg; Nittmann, Johann; Stanley, H. E.

    1989-01-01

    It is demonstrated here that inhomogeneous diffusion-limited aggregation (DLA) model can be used to simulate viscous fingering in a medium with inhomogeneous permeability and homogeneous porosity. The medium consists of a pipe-pore square-lattice network in which all pores have equal volume and the pipes have negligible volume. It is shown that fluctuations in a DLA-based growth process may be tuned by noise reduction, and that fluctuations in the velocity of the moving interface are multiplicative in form.

  2. Familial Aggregation of Absolute Pitch

    PubMed Central

    Baharloo, Siamak; Service, Susan K.; Risch, Neil; Gitschier, Jane; Freimer, Nelson B.

    2000-01-01

    Absolute pitch (AP) is a behavioral trait that is defined as the ability to identify the pitch of tones in the absence of a reference pitch. AP is an ideal phenotype for investigation of gene and environment interactions in the development of complex human behaviors. Individuals who score exceptionally well on formalized auditory tests of pitch perception are designated as “AP-1.” As described in this report, auditory testing of siblings of AP-1 probands and of a control sample indicates that AP-1 aggregates in families. The implications of this finding for the mapping of loci for AP-1 predisposition are discussed. PMID:10924408

  3. Aggregation and excitation trapping of 3,3‧-diethyl-9-methylthiacarbocyanine iodide in disordered and uniaxially oriented polymer films

    NASA Astrophysics Data System (ADS)

    Synak, Anna; Bojarski, Piotr; Gryczyński, Ignacy; Gryczyński, Zygmunt; Rangełowa-Jankowska, Simeonika; Kułak, Leszek; Sadownik, Michał; Kubicki, Aleksander; Koprowska, Ewa

    2008-08-01

    Photophysical properties of 3,3'-diethyl-9-methylthiacarbocyanine iodide (MDTCI) in disordered and uniaxially stretched poly(vinyl alcohol) films (PVA) are reported at high dye concentration. Ground-state formation of fluorescent MDTCI aggregates at high concentration was observed in unstretched and stretched PVA films using steady-state and time-resolved spectroscopic methods. It was found that fluorescence of MDTCI aggregates is almost totally depolarized in disordered matrix, but it remains partly polarized in the stretched PVA film despite energy transfer from monomers. The differences between spectral properties of aggregates in both matrices may result from partial orientation of aggregate transition moment and its immobilization in polymer cage.

  4. Spectral correlation of wideband target resonances

    NASA Astrophysics Data System (ADS)

    Sabio, Vincent

    1996-06-01

    The US Army Research Laboratory (ARL), working with the University of Maryland Department of Electrical Engineering, recently developed a novel method for efficient recognition of resonances in imagery from ARL's ultra-wideband (UWB) SAR instrumentation system, currently being used in foliage- and ground-penetration studies. The recognition technique uses linear transforms (Fourier, wavelets, etc.) to provide a basis for the design of spectrally matched filters. Implementation of the technique is very straightforward: an expectation of the target ringdown is projected onto a transform basis set, yielding a set of spectral coefficients (the 'spectral template'). UWB SAR image data are projected onto the same basis set, yielding a second vector of coefficients (the 'spectral image'). A simple correlation coefficient is generated from the two vectors, providing a measure of co-linearity of the spectral template and the spectral image: higher correlation values indicate greater co-linearity. Exceeding a correlation threshold results in a target implemented--a single 32-megabyte bipolar SAR image can be processed in less than five minutes. Initial spectral-correlation efforts focused on canonical targets and the results have been widely reported. Current studies are focusing on tactical targets, such as CUCVs. Early results on CUCVs have shown that sa single resonance-based template can be sued effectively in the recognition of tactical targets. Ongoing studies have demonstrated a substantial reduction in the false-alarm rate over results reported previously. These results, as well as improvements in the recognitions-processing stage, are reported in this paper.

  5. SPAM- SPECTRAL ANALYSIS MANAGER (UNIX VERSION)

    NASA Technical Reports Server (NTRS)

    Solomon, J. E.

    1994-01-01

    The Spectral Analysis Manager (SPAM) was developed to allow easy qualitative analysis of multi-dimensional imaging spectrometer data. Imaging spectrometers provide sufficient spectral sampling to define unique spectral signatures on a per pixel basis. Thus direct material identification becomes possible for geologic studies. SPAM provides a variety of capabilities for carrying out interactive analysis of the massive and complex datasets associated with multispectral remote sensing observations. In addition to normal image processing functions, SPAM provides multiple levels of on-line help, a flexible command interpretation, graceful error recovery, and a program structure which can be implemented in a variety of environments. SPAM was designed to be visually oriented and user friendly with the liberal employment of graphics for rapid and efficient exploratory analysis of imaging spectrometry data. SPAM provides functions to enable arithmetic manipulations of the data, such as normalization, linear mixing, band ratio discrimination, and low-pass filtering. SPAM can be used to examine the spectra of an individual pixel or the average spectra over a number of pixels. SPAM also supports image segmentation, fast spectral signature matching, spectral library usage, mixture analysis, and feature extraction. High speed spectral signature matching is performed by using a binary spectral encoding algorithm to separate and identify mineral components present in the scene. The same binary encoding allows automatic spectral clustering. Spectral data may be entered from a digitizing tablet, stored in a user library, compared to the master library containing mineral standards, and then displayed as a timesequence spectral movie. The output plots, histograms, and stretched histograms produced by SPAM can be sent to a lineprinter, stored as separate RGB disk files, or sent to a Quick Color Recorder. SPAM is written in C for interactive execution and is available for two different

  6. Calibration and characterization of spectral imaging systems

    NASA Astrophysics Data System (ADS)

    Polder, Gerrit; van der Heijden, Gerie W.

    2001-09-01

    Spectral image sensors provide images with a large umber of contiguous spectral channels per pixel. This paper describes the calibration of spectrograph based spectral imaging systems. The relation between pixel position and measured wavelength was determined using three different wavelength calibration sources. Results indicate that for spectral calibration a source with very small peaks,such as a HgAr source, is preferred to arrow band filters. A second order polynomial model gives a better fit than a linear model for the pixel to wavelength mapping. The signal to noise ratio (SNR)is determined per wavelength. In the blue part of the spectrum,the SNR was lower than in the green and red part.This is due to a decreased quantum efficiency of the CCD,a smaller transmission coefficient of the spectrograph,as well as poor performance of the illuminant. Increasing the amount of blue light,using additional Fluorescent tube with special coating increased the SNR considerably. Furthermore, the spatial and spectral resolution of the system are determined.These can be used to choose appropriate binning factors to decrease the image size without losing information.

  7. Spectrally Consistent Scattering, Absorption, and Polarization Properties of Atmospheric Ice Crystals at Wavelengths from 0.2 to 100 um

    NASA Technical Reports Server (NTRS)

    Yang, Ping; Bi, Lei; Baum, Bryan A.; Liou, Kuo-Nan; Kattawar, George W.; Mishchenko, Michael I.; Cole, Benjamin

    2013-01-01

    A data library is developed containing the scattering, absorption, and polarization properties of ice particles in the spectral range from 0.2 to 100 microns. The properties are computed based on a combination of the Amsterdam discrete dipole approximation (ADDA), the T-matrix method, and the improved geometric optics method (IGOM). The electromagnetic edge effect is incorporated into the extinction and absorption efficiencies computed from the IGOM. A full set of single-scattering properties is provided by considering three-dimensional random orientations for 11 ice crystal habits: droxtals, prolate spheroids, oblate spheroids, solid and hollow columns, compact aggregates composed of eight solid columns, hexagonal plates, small spatial aggregates composed of 5 plates, large spatial aggregates composed of 10 plates, and solid and hollow bullet rosettes. The maximum dimension of each habit ranges from 2 to 10,000 microns in 189 discrete sizes. For each ice crystal habit, three surface roughness conditions (i.e., smooth, moderately roughened, and severely roughened) are considered to account for the surface texture of large particles in the IGOM applicable domain. The data library contains the extinction efficiency, single-scattering albedo, asymmetry parameter, six independent nonzero elements of the phase matrix (P11, P12, P22, P33, P43, and P44), particle projected area, and particle volume to provide the basic single-scattering properties for remote sensing applications and radiative transfer simulations involving ice clouds. Furthermore, a comparison of satellite observations and theoretical simulations for the polarization characteristics of ice clouds demonstrates that ice cloud optical models assuming severely roughened ice crystals significantly outperform their counterparts assuming smooth ice crystals.

  8. Detergent-mediated protein aggregation.

    PubMed

    Neale, Chris; Ghanei, Hamed; Holyoake, John; Bishop, Russell E; Privé, Gilbert G; Pomès, Régis

    2013-04-01

    Because detergents are commonly used to solvate membrane proteins for structural evaluation, much attention has been devoted to assessing the conformational bias imparted by detergent micelles in comparison to the native environment of the lipid bilayer. Here, we conduct six 500-ns simulations of a system with >600,000 atoms to investigate the spontaneous self assembly of dodecylphosphocholine detergent around multiple molecules of the integral membrane protein PagP. This detergent formed equatorial micelles in which acyl chains surround the protein's hydrophobic belt, confirming existing models of the detergent solvation of membrane proteins. In addition, unexpectedly, the extracellular and periplasmic apical surfaces of PagP interacted with the headgroups of detergents in other micelles 85 and 60% of the time, respectively, forming complexes that were stable for hundreds of nanoseconds. In some cases, an apical surface of one molecule of PagP interacted with an equatorial micelle surrounding another molecule of PagP. In other cases, the apical surfaces of two molecules of PagP simultaneously bound a neat detergent micelle. In these ways, detergents mediated the non-specific aggregation of folded PagP. These simulation results are consistent with dynamic light scattering experiments, which show that, at detergent concentrations ≥600 mM, PagP induces the formation of large scattering species that are likely to contain many copies of the PagP protein. Together, these simulation and experimental results point to a potentially generic mechanism of detergent-mediated protein aggregation.

  9. Attracted diffusion-limited aggregation.

    PubMed

    Rahbari, S H Ebrahimnazhad; Saberi, A A

    2012-07-01

    In this paper we present results of extensive Monte Carlo simulations of diffusion-limited aggregation (DLA) with a seed placed on an attractive plane as a simple model in connection with the electrical double layers. We compute the fractal dimension of the aggregated patterns as a function of the attraction strength α. For the patterns grown in both two and three dimensions, the fractal dimension shows a significant dependence on the attraction strength for small values of α and approaches that of the ordinary two-dimensional (2D) DLA in the limit of large α. For the nonattracting case with α = 1, our results in three dimensions reproduce the patterns of 3D ordinary DLA, while in two dimensions our model leads to the formation of a compact cluster with dimension 2. For intermediate α, the 3D clusters have a quasi-2D structure with a fractal dimension very close to that of the ordinary 2D DLA. This allows one to control the morphology of a growing cluster by tuning a single external parameter α. PMID:23005417

  10. Attracted diffusion-limited aggregation

    NASA Astrophysics Data System (ADS)

    Rahbari, S. H. Ebrahimnazhad; Saberi, A. A.

    2012-07-01

    In this paper we present results of extensive Monte Carlo simulations of diffusion-limited aggregation (DLA) with a seed placed on an attractive plane as a simple model in connection with the electrical double layers. We compute the fractal dimension of the aggregated patterns as a function of the attraction strength α. For the patterns grown in both two and three dimensions, the fractal dimension shows a significant dependence on the attraction strength for small values of α and approaches that of the ordinary two-dimensional (2D) DLA in the limit of large α. For the nonattracting case with α=1, our results in three dimensions reproduce the patterns of 3D ordinary DLA, while in two dimensions our model leads to the formation of a compact cluster with dimension 2. For intermediate α, the 3D clusters have a quasi-2D structure with a fractal dimension very close to that of the ordinary 2D DLA. This allows one to control the morphology of a growing cluster by tuning a single external parameter α.

  11. Sectoral shifts and aggregate unemployment

    SciTech Connect

    Loungani, P.

    1986-01-01

    Some recent research has taken the view that sectoral or industry-specific shocks significantly affect aggregate unemployment by increasing the amount of inter-industry labor reallocation required. The empirical evidence for this view rests on the finding that during the 1950s - and again during the 1970s - there was a positive correlation between aggregate unemployment and the dispersion of employment growth rates. This thesis demonstrates that this correlation arises largely because oil price shocks affect both unemployment and the dispersion of employment growth. Once the dispersion due to oil shocks is accounted for, the residual dispersion in employment has very low explanatory power for unemployment. Since the dispersion index does not measure pure sectoral shifts, an alternate measure of dispersion is developed that serves as a better proxy for the amount of inter-industry labor reallocation required each period. Estimates using this measure suggest that, during the 1950s, temporary increases in the relative price of oil were responsible for generating the observed correlation. On the other hand, sectoral shifts were important during the 1970s; in particular, the 1973 oil price increase has had significant reallocative effects on the economy. This contention is subjected to further tests by looking at the time-series behavior of employment in durable-goods industries and also by following the inter-industry movements of workers over time through the use of panel data.

  12. A review of volcanic ash aggregation

    NASA Astrophysics Data System (ADS)

    Brown, R. J.; Bonadonna, C.; Durant, A. J.

    2012-01-01

    Most volcanic ash particles with diameters <63 μm settle from eruption clouds as particle aggregates that cumulatively have larger sizes, lower densities, and higher terminal fall velocities than individual constituent particles. Particle aggregation reduces the atmospheric residence time of fine ash, which results in a proportional increase in fine ash fallout within 10-100 s km from the volcano and a reduction in airborne fine ash mass concentrations 1000 s km from the volcano. Aggregate characteristics vary with distance from the volcano: proximal aggregates are typically larger (up to cm size) with concentric structures, while distal aggregates are typically smaller (sub-millimetre size). Particles comprising ash aggregates are bound through hydro-bonds (liquid and ice water) and electrostatic forces, and the rate of particle aggregation correlates with cloud liquid water availability. Eruption source parameters (including initial particle size distribution, erupted mass, eruption column height, cloud water content and temperature) and the eruption plume temperature lapse rate, coupled with the environmental parameters, determines the type and spatiotemporal distribution of aggregates. Field studies, lab experiments and modelling investigations have already provided important insights on the process of particle aggregation. However, new integrated observations that combine remote sensing studies of ash clouds with field measurement and sampling, and lab experiments are required to fill current gaps in knowledge surrounding the theory of ash aggregate formation.

  13. Applications of aggregation theory to sustainability assessment

    SciTech Connect

    Pollesch, N.; Dale, V. H.

    2015-04-01

    In order to aid in transition towards operations that promote sustainability goals, researchers and stakeholders use sustainability assessments. Although assessments take various forms, many utilize diverse sets of indicators that can number anywhere from two to over 2000. Indices, composite indicators, or aggregate values are used to simplify high dimensional and complex data sets and to clarify assessment results. Although the choice of aggregation function is a key component in the development of the assessment, there are few examples to be found in literature to guide appropriate aggregation function selection. This paper develops a connection between the mathematical study of aggregation functions and sustainability assessment in order to aid in providing criteria for aggregation function selection. Relevant mathematical properties of aggregation functions are presented and interpreted. Lastly, we provide cases of these properties and their relation to previous sustainability assessment research. Examples show that mathematical aggregation properties can be used to address the topics of compensatory behavior and weak versus strong sustainability, aggregation of data under varying units of measurements, multiple site multiple indicator aggregation, and the determination of error bounds in aggregate output for normalized and non-normalized indicator measures.

  14. Applications of aggregation theory to sustainability assessment

    DOE PAGES

    Pollesch, N.; Dale, V. H.

    2015-04-01

    In order to aid in transition towards operations that promote sustainability goals, researchers and stakeholders use sustainability assessments. Although assessments take various forms, many utilize diverse sets of indicators that can number anywhere from two to over 2000. Indices, composite indicators, or aggregate values are used to simplify high dimensional and complex data sets and to clarify assessment results. Although the choice of aggregation function is a key component in the development of the assessment, there are few examples to be found in literature to guide appropriate aggregation function selection. This paper develops a connection between the mathematical study ofmore » aggregation functions and sustainability assessment in order to aid in providing criteria for aggregation function selection. Relevant mathematical properties of aggregation functions are presented and interpreted. Lastly, we provide cases of these properties and their relation to previous sustainability assessment research. Examples show that mathematical aggregation properties can be used to address the topics of compensatory behavior and weak versus strong sustainability, aggregation of data under varying units of measurements, multiple site multiple indicator aggregation, and the determination of error bounds in aggregate output for normalized and non-normalized indicator measures.« less

  15. Role of Multicellular Aggregates in Biofilm Formation

    PubMed Central

    Kragh, Kasper N.; Hutchison, Jaime B.; Melaugh, Gavin; Rodesney, Chris; Roberts, Aled E. L.; Irie, Yasuhiko; Jensen, Peter Ø.; Diggle, Stephen P.; Allen, Rosalind J.

    2016-01-01

    ABSTRACT In traditional models of in vitro biofilm development, individual bacterial cells seed a surface, multiply, and mature into multicellular, three-dimensional structures. Much research has been devoted to elucidating the mechanisms governing the initial attachment of single cells to surfaces. However, in natural environments and during infection, bacterial cells tend to clump as multicellular aggregates, and biofilms can also slough off aggregates as a part of the dispersal process. This makes it likely that biofilms are often seeded by aggregates and single cells, yet how these aggregates impact biofilm initiation and development is not known. Here we use a combination of experimental and computational approaches to determine the relative fitness of single cells and preformed aggregates during early development of Pseudomonas aeruginosa biofilms. We find that the relative fitness of aggregates depends markedly on the density of surrounding single cells, i.e., the level of competition for growth resources. When competition between aggregates and single cells is low, an aggregate has a growth disadvantage because the aggregate interior has poor access to growth resources. However, if competition is high, aggregates exhibit higher fitness, because extending vertically above the surface gives cells at the top of aggregates better access to growth resources. Other advantages of seeding by aggregates, such as earlier switching to a biofilm-like phenotype and enhanced resilience toward antibiotics and immune response, may add to this ecological benefit. Our findings suggest that current models of biofilm formation should be reconsidered to incorporate the role of aggregates in biofilm initiation. PMID:27006463

  16. Asphaltene Aggregation and Fouling Behavior

    NASA Astrophysics Data System (ADS)

    Derakhshesh, Marzie

    This thesis explored the properties of asphaltene nano-aggregates in crude oil and toluene based solutions and fouling at process furnace temperatures, and the links between these two phenomena. The link between stability of asphaltenes at ambient conditions and fouling at the conditions of a delayed coker furnace, at over 450 °C, was examined by blending crude oil with an aliphatic diluent in different ratios. The stability of the blends were measured using a S-value analyzer, then fouling rates were measured on electrically heated stainless steel 316 wires in an autoclave reactor. The less stable the blend, the greater the rate and extent of fouling. The most severe fouling occurred with the unstable asphaltenes. SEM imaging of the foulant illustrates very different textures, with the structure becoming more porous with lower stability. Under cross-polarized light, the coke shows the presence of mesophase in the foulant layer. These data suggest a correlation between the fouling rate at high temperature furnace conditions and the stability index of the crude oil. Three organic polysulfides were introduced to the crude oil to examine their effect on fouling. The polysulfides are able to reduce coking and carbon monoxide generation in steam crackers. The fouling results demonstrated that polysulfide with more sulfur content increased the amount of corrosion-fouling of the wire. Various additives, solvents, ultrasound, and heat were employed to attempt to completely disaggregate the asphaltene nano-aggregates in solution at room temperature. The primary analytical technique used to monitor the nano-aggregation state of the asphaltenes in solution was the UV-visible spectroscopy. The results indicate that stronger solvents, such as pyridine and quinoline, combined with ionic liquids yield a slight reduction in the apparent absorbance at longer wavelengths, indicative of a decrease in the nano-aggregate size although the magnitude of the decrease is not significant

  17. Task-Driven Evaluation of Aggregation in Time Series Visualization.

    PubMed

    Albers, Danielle; Correll, Michael; Gleicher, Michael

    2014-01-01

    Many visualization tasks require the viewer to make judgments about aggregate properties of data. Recent work has shown that viewers can perform such tasks effectively, for example to efficiently compare the maximums or means over ranges of data. However, this work also shows that such effectiveness depends on the designs of the displays. In this paper, we explore this relationship between aggregation task and visualization design to provide guidance on matching tasks with designs. We combine prior results from perceptual science and graphical perception to suggest a set of design variables that influence performance on various aggregate comparison tasks. We describe how choices in these variables can lead to designs that are matched to particular tasks. We use these variables to assess a set of eight different designs, predicting how they will support a set of six aggregate time series comparison tasks. A crowd-sourced evaluation confirms these predictions. These results not only provide evidence for how the specific visualizations support various tasks, but also suggest using the identified design variables as a tool for designing visualizations well suited for various types of tasks.

  18. Power spectral estimation algorithms

    NASA Technical Reports Server (NTRS)

    Bhatia, Manjit S.

    1989-01-01

    Algorithms to estimate the power spectrum using Maximum Entropy Methods were developed. These algorithms were coded in FORTRAN 77 and were implemented on the VAX 780. The important considerations in this analysis are: (1) resolution, i.e., how close in frequency two spectral components can be spaced and still be identified; (2) dynamic range, i.e., how small a spectral peak can be, relative to the largest, and still be observed in the spectra; and (3) variance, i.e., how accurate the estimate of the spectra is to the actual spectra. The application of the algorithms based on Maximum Entropy Methods to a variety of data shows that these criteria are met quite well. Additional work in this direction would help confirm the findings. All of the software developed was turned over to the technical monitor. A copy of a typical program is included. Some of the actual data and graphs used on this data are also included.

  19. DSDEPROJ: Direct Spectral Deprojection

    NASA Astrophysics Data System (ADS)

    Sanders, Jeremy; Russell, Helen

    2016-10-01

    Deprojection of X-ray data by methods such as PROJCT, which are model dependent, can produce large and unphysical oscillating temperature profiles. Direct Spectral Deprojection (DSDEPROJ) solves some of the issues inherent to model-dependent deprojection routines. DSDEPROJ is a model-independent approach, assuming only spherical symmetry, which subtracts projected spectra from each successive annulus to produce a set of deprojected spectra.

  20. Natural aggregates of the conterminous United States

    USGS Publications Warehouse

    Langer, William H.

    1988-01-01

    Crushed stone and sand and gravel are the two main sources of natural aggregates. These materials are commonly used construction materials and frequently can be interchanged with one another. They are widely used throughout the United States, with every State except two producing crushed stone. Together they amount to about half the mining volume in the United States. Approximately 96 percent of sand and gravel and 77 percent of the crushed stone produced in the United States are used in the construction industry. Natural aggregates are widely distributed throughout the United States in a variety of geologic environments. Sand and gravel deposits commonly are the results of the weathering of bedrock and subsequent transportation and deposition of the material by water or ice (glaciers). As such, they commonly occur as river or stream deposits or in glaciated areas as glaciofluvial and other deposits. Crushed stone aggregates are derived from a wide variety of parent bedrock materials. Limestone and other carbonates account for approximately three quarters of the rocks used for crushed stone, with granite and other igneous rocks making up the bulk of the remainder. Limestone deposits are widespread throughout the Central and Eastern United States and are scattered in the West. Granites are widely distributed in the Eastern and Western United States, with few exposures in the Midwest. Igneous rocks (excluding granites) are largely concentrated in the Western United States and in a few isolated localities in the East. Even though natural aggregates are widely distributed throughout the United States, they are not universally available for consumptive use. Some areas are devoid of sand and gravel, and potential sources of crushed stone may be covered with sufficient unconsolidated material to make surface mining impractical. In some areas many aggregates do not meet the physical property requirements for certain uses, or they may contain mineral constituents that react

  1. Spectral tailoring device

    DOEpatents

    Brager, H.R.; Schenter, R.E.; Carter, L.L.; Karnesky, R.A.

    1987-08-05

    A spectral tailoring device for altering the neutron energy spectra and flux of neutrons in a fast reactor thereby selectively to enhance or inhibit the transmutation rate of a target metrical to form a product isotope. Neutron moderators, neutron filters, neutron absorbers and neutron reflectors may be used as spectral tailoring devices. Depending on the intended use for the device, a member from each of these four classes of materials could be used singularly, or in combination, to provide a preferred neutron energy spectra and flux of the neutrons in the region of the target material. In one embodiment of the invention, an assembly is provided for enhancing the production of isotopes, such as cobalt 60 and gadolinium 153. In another embodiment of the invention, a spectral tailoring device is disposed adjacent a target material which comprises long lived or volatile fission products and the device is used to shift the neutron energy spectra and flux of neutrons in the region of the fission products to preferentially transmute them to produce a less volatile fission product inventory. 6 figs.

  2. Spectral methods for discontinuous problems

    NASA Technical Reports Server (NTRS)

    Abarbanel, S.; Gottlieb, D.; Tadmor, E.

    1985-01-01

    Spectral methods yield high-order accuracy even when applied to problems with discontinuities, though not in the sense of pointwise accuracy. Two different procedures are presented which recover pointwise accurate approximations from the spectral calculations.

  3. Waves and aggregation patterns in myxobacteria

    NASA Astrophysics Data System (ADS)

    Igoshin, Oleg A.; Welch, Roy; Kaiser, Dale; Oster, George

    2004-03-01

    Under starvation conditions, a population of myxobacteria aggregates to build a fruiting body whose shape is species-specific and within which the cells sporulate. Early in this process, cells often pass through a "ripple phase" characterized by traveling linear, concentric, and spiral waves. These waves are different from the waves observed during slime mold aggregation that depend on diffusible morphogens, because myxobacteria communicate by direct contact. The difference is most dramatic when waves collide: rather than annihilating one another, myxobacterial waves appear to pass through one another unchanged. Under certain conditions, the spacing and location of the nascent fruiting bodies is determined by the wavelength and pattern of the waves. Later in fruiting body development, waves are replaced by streams of cells that circulate around small initial aggregates enlarging and rounding them. Still later, pairs of motile aggregates coalesce to form larger aggregates that develop into fruiting bodies. Here we present a mathematical model that quantitatively explains these wave and aggregation phenomena.

  4. Aggregation server for grid-integrated vehicles

    DOEpatents

    Kempton, Willett

    2015-05-26

    Methods, systems, and apparatus for aggregating electric power flow between an electric grid and electric vehicles are disclosed. An apparatus for aggregating power flow may include a memory and a processor coupled to the memory to receive electric vehicle equipment (EVE) attributes from a plurality of EVEs, aggregate EVE attributes, predict total available capacity based on the EVE attributes, and dispatch at least a portion of the total available capacity to the grid. Power flow may be aggregated by receiving EVE operational parameters from each EVE, aggregating the received EVE operational parameters, predicting total available capacity based on the aggregated EVE operational parameters, and dispatching at least a portion of the total available capacity to the grid.

  5. Tubular aggregates: their association with myalgia.

    PubMed Central

    Niakan, E; Harati, Y; Danon, M J

    1985-01-01

    Three thousand consecutive muscle biopsies were reviewed for the presence of tubular aggregates and their association with clinical symptomatology. Tubular aggregates were detected in 19 patients (0.6%). Twelve of these nineteen patients had severe myalgia, and the most abundant tubular aggregates were found in biopsies of patients with myalgia. Seven patients had only myalgia as their clinical symptomatology with normal physical examination. An additional five patients with tubular aggregates and myalgia had concomitant amyotrophic lateral sclerosis (2) or neuropathy (3). The high incidence of myalgia associated with tubular aggregates in our patients and the fact that tubular aggregates originate from sarcoplasmic reticulum suggest a role played by this structure in the pathogenesis of myalgia. Images PMID:2995591

  6. Multiscale simulation of red blood cell aggregation

    NASA Astrophysics Data System (ADS)

    Bagchi, P.; Popel, A. S.

    2004-11-01

    In humans and other mammals, aggregation of red blood cells (RBC) is a major determinant to blood viscosity in microcirculation under physiological and pathological conditions. Elevated levels of aggregation are often related to cardiovascular diseases, bacterial infection, diabetes, and obesity. Aggregation is a multiscale phenomenon that is governed by the molecular bond formation between adjacent cells, morphological and rheological properties of the cells, and the motion of the extra-cellular fluid in which the cells circulate. We have developed a simulation technique using front tracking methods for multiple fluids that includes the multiscale characteristics of aggregation. We will report the first-ever direct computer simulation of aggregation of deformable cells in shear flows. We will present results on the effect of shear rate, strength of the cross-bridging bonds, and the cell rheological properties on the rolling motion, deformation and subsequent breakage of an aggregate.

  7. Surface Plasmon-Coupled Emission of Rhodamine 110 Aggregates in a Silica Nanolayer.

    PubMed

    Rangełowa-Jankowska, Simeonika; Jankowski, Dawid; Bogdanowicz, Robert; Grobelna, Beata; Bojarski, Piotr

    2012-12-01

    First analysis of strong directional surface plasmon-coupled emission (SPCE) of ground-state formed intermolecular aggregates of Rhodamine 110 (R110) in silica nanofilms deposited on silver nanolayers is reported. Until now, the processes of energy transport and its trapping due to aggregate formation have not been studied in the presence of SPCE. A new approach to multicomponent systems with weakly and strongly fluorescent centers making use of fluorophore-surface plasmon interaction is presented. The analysis is based on comparison of experimental free-space emission spectra (F-SE), experimental SPCE with theoretical surface plasmon resonance spectra (SPR). It is shown that, due to the dispersion of SPCE, the detection of weak aggregate emission is straightforward if only the monomers and aggregates fluorescence spectra are somewhat spectrally shifted. SPCE studies confirmed the formation of weakly fluorescent higher order aggregates of R110 in silica films. The results indicate that the increase of energy transfer from monomers to aggregates is due to fluorophore-plasmon interaction.

  8. OUTWARD MOTION OF POROUS DUST AGGREGATES BY STELLAR RADIATION PRESSURE IN PROTOPLANETARY DISKS

    SciTech Connect

    Tazaki, Ryo; Nomura, Hideko

    2015-02-01

    We study the dust motion at the surface layer of protoplanetary disks. Dust grains in the surface layer migrate outward owing to angular momentum transport via gas-drag force induced by the stellar radiation pressure. In this study we calculate the mass flux of the outward motion of compact grains and porous dust aggregates by the radiation pressure. The radiation pressure force for porous dust aggregates is calculated using the T-Matrix Method for the Clusters of Spheres. First, we confirm that porous dust aggregates are forced by strong radiation pressure even if they grow to be larger aggregates, in contrast to homogeneous and spherical compact grains, for which radiation pressure efficiency becomes lower when their sizes increase. In addition, we find that the outward mass flux of porous dust aggregates with monomer size of 0.1 μm is larger than that of compact grains by an order of magnitude at the disk radius of 1 AU, when their sizes are several microns. This implies that large compact grains like calcium-aluminum-rich inclusions are hardly transported to the outer region by stellar radiation pressure, whereas porous dust aggregates like chondritic-porous interplanetary dust particles are efficiently transported to the comet formation region. Crystalline silicates are possibly transported in porous dust aggregates by stellar radiation pressure from the inner hot region to the outer cold cometary region in the protosolar nebula.

  9. Joint translog model of energy aggregation and industrial demand for energy in US manufacturing

    SciTech Connect

    Taheri, A.A.

    1987-01-01

    This study builds on the work of Berndt and Christensen (1973b), Hudson and Jorgenson (1974), and Fuss (1977) by extending the (solo) price-aggregation model to incorporate the joint price/quantity aggregation of energy inputs, using the recently developed translog (Christensen et al., 1973) as (homothetic) aggregator models. The procedure represents the first step in a two-step optimization, which holds under the assumption of (homothetic) weak-separability, and generates aggregates that are internally consistent and first-step optimal. The two models are integrated via the theory of duality, and estimated indirectly by joint estimation of a complete system of derived fuel-share equations. One major advantage of this joint estimation is that, the complete system yields parameter estimates that are more efficient than those obtained by the (solo) price-aggregation model. It also leads to more-robust estimated models based on the same body of data. While the internally consistent energy aggregates have important applications in aggregate energy research, the aggregation model also provides an econometric model for empirical investigation of interfuel substitution responses in the US manufacturing.

  10. Advances in examining preferences for similarity in seating: Revisiting the aggregation index.

    PubMed

    Hernandez, Ivan

    2015-12-01

    Past research finds that people prefer to sit next to others who are similar to them in a variety of dimensions such as race, sex, and physical appearance. This preference for similarity in seating arrangements is called aggregation and is most commonly measured with the aggregation index (Campbell, Kruskal, & Wallace, Sociometry 29, 1-15, 1966). The aggregation index compares the observed dissimilarity in seating with the amount of dissimilarity that would be expected if seats were chosen randomly. However, the current closed-form equations for this method limit the ease, flexibility, and inferences that researchers have. This paper presents a new approach for studying aggregation that uses bootstrapped resampling of the seating environment to estimate the aggregation index parameters. This method, compiled as an executable program, SocialAggregation, reads a seating chart matrix provided by the researcher and automatically computes the observed number of dissimilar adjacencies, and simulates random seating preferences. The current method's estimates not only converge with those of the original method, but it also handles a wider variety of situations and also allows for more precise hypothesis testing by directly modeling the distribution of the seating arrangements. Developing a better measure of aggregation opens new possibilities for understanding intergroup biases, and allows researchers to examine aggregation more efficiently. PMID:25427955

  11. Enhanced apoptotic effects of dihydroartemisinin-aggregated gelatin and hyaluronan nanoparticles on human lung cancer cells.

    PubMed

    Sun, Qian; Teong, Benjamin; Chen, I-Fen; Chang, Shwu Jen; Gao, Jimin; Kuo, Shyh-Ming

    2014-04-01

    Recent studies suggest that dihydroartemisinin (DHA), a derivative of artemisinin isolated from the traditional Chinese herb Artemisia annua L., has anticancer properties. Due to poor water solubility, poor oral activity, and a short plasma half-life, large doses of DHA have to be injected to achieve the necessary bioavailability. This study examined increasing DHA bioavailability by encapsulating DHA within gelatin (GEL) or hyaluronan (HA) nanoparticles via an electrostatic field system. Observations from transmission electron microscopy show that DHA in GEL and HA nanoparticles formed GEL/DHA and HA/DHA aggregates that were approximately 30-40 nm in diameter. The entrapment efficiencies for DHA were approximately 13 and 35% for the GEL/DHA and HA/DHA aggregates, respectively. The proliferation of A549 cells was inhibited by the GEL/DHA and HA/DHA aggregates. Fluorescent annexin V-fluorescein isothiocyanate (FITC) and propidium iodide (PI) staining displayed low background staining with annexin V-FITC or PI on DHA-untreated cells. In contrast, annexin V-FITC and PI stains dramatically increased when the cells were incubated with GEL/DHA and HA/DHA aggregates. These results suggest that DHA-aggregated GEL and HA nanoparticles exhibit higher anticancer proliferation activities than DHA alone in A549 cells most likely due to the greater aqueous dispersion after hydrophilic GEL or HA nanoparticles aggregation. These results demonstrate that DHA can aggregate with nanoparticles in an electrostatic field environment to form DHA nanosized aggregates. PMID:24039154

  12. Optimization of spectral printer modeling based on a modified cellular Yule-Nielsen spectral Neugebauer model.

    PubMed

    Liu, Qiang; Wan, Xiaoxia; Xie, Dehong

    2014-06-01

    The study presented here optimizes several steps in the spectral printer modeling workflow based on a cellular Yule-Nielsen spectral Neugebauer (CYNSN) model. First, a printer subdividing method was developed that reduces the number of sub-models while maintaining the maximum device gamut. Second, the forward spectral prediction accuracy of the CYNSN model for each subspace of the printer was improved using back propagation artificial neural network (BPANN) estimated n values. Third, a sequential gamut judging method, which clearly reduced the complexity of the optimal sub-model and cell searching process during printer backward modeling, was proposed. After that, we further modified the use of the modeling color metric and comprehensively improved the spectral and perceptual accuracy of the spectral printer model. The experimental results show that the proposed optimization approaches provide obvious improvements in aspects of the modeling accuracy or efficiency for each of the corresponding steps, and an overall improvement of the optimized spectral printer modeling workflow was also demonstrated.

  13. Modern spectral transmissometer

    NASA Astrophysics Data System (ADS)

    Borgerson, Mark J.; Bartz, Robert; Zaneveld, J. Ronald V.; Kitchen, James C.

    1990-09-01

    We have evaluated a number of spectral attenuation meter designs based on constraints related to power consumption, spectral bandwidth, sampling time, accuracy and stability . Our fmal instrument design employs a unique optical bridge deve1oped1r Sea Tech with ONR support, a tungsten light source and a holographic grating monochromatorThe instrument design is summarized as follows: White light from a 10-Watt tungsten lamp with a 1mm2 filament is collected by a condensing lens and then spatially filtered by a 1mm diameter pinhole which is placed at the entrance port of a monochromator. The monochromator has a 45°, 1200 lines/mm, holographic grating 37 mm in diameter with a 91 mm focal length. The grating is rotated about its vertical axis with a sine arm driven by a stepping motor, allowing wavelength to be selected from 400 to 800 nm. At the exit port of the monochromator we use a 1mm diameter pinhole which spectrally filters the output light, resulting in a spectral bandwidth of 9. 1 nm. This nearly monochromatic light is then measured by a unique reference detector with a 0.5mm diameter pinhole at its center, allowing light to be transmitted through the center of the detector. The transmitted light has a bandwidth of 4.5 nm. The monochromatic light is then collimated by a 50mm focal length achromatic lens and stopped down to a beam 1 cm in diameter. This light then enters the sample chamber. After passing through the sample the light is received by a 61mm focal length achromatic lens and is focused onto a signal detector with a diameter of 1.25mm. Digitized ratios ofreference detector to signal detector voltages allow transmission to be measured with an accuracy of 0.05% and a resolution of 0.01%. By monitoring temperature we were able to temperature compensate the instrument to within 0.05% transmission from 00 C to 25° C. Based on these results it is now possible to construct a spectral attenuation meter with the required sensitivity and accuracy to measure

  14. SWOC: Spectral Wavelength Optimization Code

    NASA Astrophysics Data System (ADS)

    Ruchti, G. R.

    2016-06-01

    SWOC (Spectral Wavelength Optimization Code) determines the wavelength ranges that provide the optimal amount of information to achieve the required science goals for a spectroscopic study. It computes a figure-of-merit for different spectral configurations using a user-defined list of spectral features, and, utilizing a set of flux-calibrated spectra, determines the spectral regions showing the largest differences among the spectra.

  15. Using GIS servers and interactive maps in spectral data sharing and administration: Case study of Ahvaz Spectral Geodatabase Platform (ASGP)

    NASA Astrophysics Data System (ADS)

    Karami, Mojtaba; Rangzan, Kazem; Saberi, Azim

    2013-10-01

    With emergence of air-borne and space-borne hyperspectral sensors, spectroscopic measurements are gaining more importance in remote sensing. Therefore, the number of available spectral reference data is constantly increasing. This rapid increase often exhibits a poor data management, which leads to ultimate isolation of data on disk storages. Spectral data without precise description of the target, methods, environment, and sampling geometry cannot be used by other researchers. Moreover, existing spectral data (in case it accompanied with good documentation) become virtually invisible or unreachable for researchers. Providing documentation and a data-sharing framework for spectral data, in which researchers are able to search for or share spectral data and documentation, would definitely improve the data lifetime. Relational Database Management Systems (RDBMS) are main candidates for spectral data management and their efficiency is proven by many studies and applications to date. In this study, a new approach to spectral data administration is presented based on spatial identity of spectral samples. This method benefits from scalability and performance of RDBMS for storage of spectral data, but uses GIS servers to provide users with interactive maps as an interface to the system. The spectral files, photographs and descriptive data are considered as belongings of a geospatial object. A spectral processing unit is responsible for evaluation of metadata quality and performing routine spectral processing tasks for newly-added data. As a result, by using internet browser software the users would be able to visually examine availability of data and/or search for data based on descriptive attributes associated to it. The proposed system is scalable and besides giving the users good sense of what data are available in the database, it facilitates participation of spectral reference data in producing geoinformation.

  16. Interference between Coulombic and CT-mediated couplings in molecular aggregates: H- to J-aggregate transformation in perylene-based π-stacks.

    PubMed

    Hestand, Nicholas J; Spano, Frank C

    2015-12-28

    The spectroscopic differences between J and H-aggregates are traditionally attributed to the spatial dependence of the Coulombic coupling, as originally proposed by Kasha. However, in tightly packed molecular aggregates wave functions on neighboring molecules overlap, leading to an additional charge transfer (CT) mediated exciton coupling with a vastly different spatial dependence. The latter is governed by the nodal patterns of the molecular LUMOs and HOMOs from which the electron (te) and hole (th) transfer integrals derive. The sign of the CT-mediated coupling depends on the sign of the product teth and is therefore highly sensitive to small (sub-Angstrom) transverse displacements or slips. Given that Coulombic and CT-mediated couplings exist simultaneously in tightly packed molecular systems, the interference between the two must be considered when defining J and H-aggregates. Generally, such π-stacked aggregates do not abide by the traditional classification scheme of Kasha: for example, even when the Coulomb coupling is strong the presence of a similarly strong but destructively interfering CT-mediated coupling results in "null-aggregates" which spectroscopically resemble uncoupled molecules. Based on a Frenkel/CT Holstein Hamiltonian that takes into account both sources of electronic coupling as well as intramolecular vibrations, vibronic spectral signatures are developed for integrated Frenkel/CT systems in both the perturbative and resonance regimes. In the perturbative regime, the sign of the lowest exciton band curvature, which rigorously defines J and H-aggregation, is directly tracked by the ratio of the first two vibronic peak intensities. Even in the resonance regime, the vibronic ratio remains a useful tool to evaluate the J or H nature of the system. The theory developed is applied to the reversible H to J-aggregate transformations recently observed in several perylene bisimide systems.

  17. Microbial aggregates in anaerobic wastewater treatment.

    PubMed

    Kosaric, N; Blaszczyk, R

    1990-01-01

    The phenomenon aggregation of anaerobic bacteria gives an opportunity to speed up the digestion rate during methanogenesis. The aggregates are mainly composed of methanogenic bacteria which convert acetate and H2/CO2 into methane. Other bacteria are also included in the aggregates but their concentration is rather small. The aggregates may also be formed during acetogenesis or even hydrolysis but such aggregates are not stable and disrupt quickly when not fed. A two stage process seems to be suitable when high concentrated solid waste must be treated. Special conditions are necessary to promote aggregate formation from methanogenic bacteria but aggregates once formed are stable without feeding even for a few years. The structure, texture and activity of bacterial aggregates depend on several parameters: (1)--temperature and pH, (2)--wastewater composition and (3)--hydrodynamic conditions within the reactor. The common influence of all these parameters is still rather unknown but some recommendations may be given. Temperature and pH should be maintained in the range which is optimal for methanogenic bacteria e.g. a temperature between 32 and 50 degrees C and a value pH between 6.5 and 7.5. Wastewaters should contain soluble wastes and the specific loading rate should be around one kgCOD(kgVSS)-1 d-1. The concentration of the elements influences aggregate composition and probably structure and texture. At high calcium concentration a change in the colour of the granules has been observed. Research is necessary to investigate the influence of other elements and organic toxicants on maintenance of the aggregates. Hydrodynamic conditions seem to influence the stability of the granules over long time periods. At low liquid stream rates, aggregates may starve and lysis within the aggregates is possible which results in hollowing of aggregates and their floating. At high liquid stream rates the aggregates may be disrupted and washed out of the reactor as a flocculent

  18. Neuronal aggregates: formation, clearance and spreading

    PubMed Central

    Lim, Junghyun; Yue, Zhenyu

    2015-01-01

    Summary Proteostasis is maintained by multiple cellular pathways, including protein synthesis, quality control and degradation. An imbalance of neuronal proteostasis, associated with protein misfolding and aggregation, leads to proteinopathies or neurodegeneration. While genetic variations and protein modifications contribute to aggregate formation, components of the proteostasis network dictate the fate of protein aggregates. Here we provide an overview of proteostasis pathways and their interplay (particularly autophagy) with the metabolism of disease-related proteins. We review recent studies on neuronal activity-mediated regulation of proteostasis and transcellular propagation of protein aggregates in the nervous system. Targeting proteostasis pathways therapeutically remains an attractive but challenging task. PMID:25710535

  19. Immunogenicity of therapeutic proteins: influence of aggregation.

    PubMed

    Ratanji, Kirsty D; Derrick, Jeremy P; Dearman, Rebecca J; Kimber, Ian

    2014-01-01

    The elicitation of anti-drug antibodies (ADA) against biotherapeutics can have detrimental effects on drug safety, efficacy, and pharmacokinetics. The immunogenicity of biotherapeutics is, therefore, an important issue. There is evidence that protein aggregation can result in enhanced immunogenicity; however, the precise immunological and biochemical mechanisms responsible are poorly defined. In the context of biotherapeutic drug development and safety assessment, understanding the mechanisms underlying aggregate immunogenicity is of considerable interest. This review provides an overview of the phenomenon of protein aggregation, the production of unwanted aggregates during bioprocessing, and how the immune response to aggregated protein differs from that provoked by non-aggregated protein. Of particular interest is the nature of the interaction of aggregates with the immune system and how subsequent ADA responses are induced. Pathways considered here include 'classical' activation of the immune system involving antigen presenting cells and, alternatively, the breakdown of B-cell tolerance. Additionally, methods available to screen for aggregation and immunogenicity will be described. With an increased understanding of aggregation-enhanced immune responses, it may be possible to develop improved manufacturing and screening processes to avoid, or at least reduce, the problems associated with ADA.

  20. Bouncing behavior of microscopic dust aggregates

    NASA Astrophysics Data System (ADS)

    Seizinger, A.; Kley, W.

    2013-03-01

    Context. Bouncing collisions of dust aggregates within the protoplanetary disk may have a significant impact on the growth process of planetesimals. Yet, the conditions that result in bouncing are not very well understood. Existing simulations studying the bouncing behavior used aggregates with an artificial, very regular internal structure. Aims: Here, we study the bouncing behavior of sub-mm dust aggregates that are constructed applying different sample preparation methods. We analyze how the internal structure of the aggregate alters the collisional outcome and we determine the influence of aggregate size, porosity, collision velocity, and impact parameter. Methods: We use molecular dynamics simulations where the individual aggregates are treated as spheres that are made up of several hundred thousand individual monomers. The simulations are run on graphic cards (GPUs). Results: Statistical bulk properties and thus bouncing behavior of sub-mm dust aggregates depend heavily on the preparation method. In particular, there is no unique relation between the average volume filling factor and the coordination number of the aggregate. Realistic aggregates bounce only if their volume filling factor exceeds 0.5 and collision velocities are below 0.1 ms-1. Conclusions: For dust particles in the protoplanetary nebula we suggest that the bouncing barrier may not be such a strong handicap in the growth phase of dust agglomerates, at least in the size range of ≈100 μm.

  1. Swarms: Optimum aggregations of spacecraft

    NASA Technical Reports Server (NTRS)

    Mayer, H. L.

    1980-01-01

    Swarms are aggregations of spacecraft or elements of a space system which are cooperative in function, but physically isolated or only loosely connected. For some missions the swarm configuration may be optimum compared to a group of completely independent spacecraft or a complex rigidly integrated spacecraft or space platform. General features of swarms are induced by considering an ensemble of 26 swarms, examples ranging from Earth centered swarms for commercial application to swarms for exploring minor planets. A concept for a low altitude swarm as a substitute for a space platform is proposed and a preliminary design studied. The salient design feature is the web of tethers holding the 30 km swarm in a rigid two dimensional array in the orbital plane. A mathematical discussion and tutorial in tether technology and in some aspects of the distribution of services (mass, energy, and information to swarm elements) are included.

  2. Collisional Aggregation Due to Turbulence

    NASA Astrophysics Data System (ADS)

    Pumir, Alain; Wilkinson, Michael

    2016-03-01

    Collisions between particles suspended in a fluid play an important role in many physical processes. As an example, collisions of microscopic water droplets in clouds are a necessary step in the production of macroscopic raindrops. Collisions of dust grains are also conjectured to be important for planet formation in the gas surrounding young stars and to play a role in the dynamics of sand storms. In these processes, collisions are favored by fast turbulent motions. Here we review recent advances in the understanding of collisional aggregation due to turbulence. We discuss the role of fractal clustering of particles and caustic singularities of their velocities. We also discuss limitations of the Smoluchowski equation for modeling such processes. These advances lead to a semiquantitative understanding on the influence of turbulence on collision rates and point to deficiencies in the current understanding of rainfall and planet formation.

  3. Observations and modelling of microphysical variability, aggregation and sedimentation in tropical anvil cirrus outflow regions

    NASA Astrophysics Data System (ADS)

    Gallagher, M. W.; Connolly, P. J.; Crawford, I.; Heymsfield, A.; Bower, K. N.; Choularton, T. W.; Allen, G.; Flynn, M. J.; Vaughan, G.; Hacker, J.

    2012-07-01

    Aircraft measurements of the microphysics of a tropical convective anvil (at temperatures ~-60 °C) forming above the Hector storm, over the Tiwi Islands, Northern Australia, have been conducted with a view to determining ice crystal aggregation efficiencies from in situ measurements. The observed microphysics have been compared to an explicit bin-microphysical model of the anvil region, which includes crystal growth by vapour diffusion and aggregation and the process of differential sedimentation. It has been found in flights made using straight and level runs perpendicular to the storm that the number of ice crystals initially decreased with distance from the storm as aggregation took place resulting in larger crystals, followed by their loss from the cloud layer due to sedimentation. The net result was that the mass (i.e. Ice Water Content) in the anvil Ci cloud decreased, but also that the average particle size (weighted by number) remained relatively constant along the length of the anvil outflow. Comparisons with the explicit microphysics model showed that the changes in the shapes of the ice crystal spectra as a function of distance from the storm could be explained by the model if the aggregation efficiency was set to values of Eagg~0.5 and higher. This result is supported by recent literature on aggregation efficiencies for complex ice particles and suggests that either the mechanism of particle interlocking is important to the aggregation process, or that other effects are occuring, such as enhancement of ice-aggregation by high electric fields that arise as a consequence of charge separation within the storm. It is noteworthy that this value of the ice crystal aggregation efficiency is much larger than values used in cloud resolving models at these temperatures, which typically use E~0.0016. These results are important to understanding how cold clouds evolve in time and for the treatment of the evolution of tropical Ci in numerical models.

  4. Emerin expression in tubular aggregates.

    PubMed

    Manta, Panagiota; Terzis, Gerasimos; Papadimitriou, Constantinos; Kontou, Chrysanthi; Vassilopoulos, Demetris

    2004-06-01

    Emerin is an inner nuclear membrane protein that is mutated or not expressed in patients with X-linked Emery-Dreifuss muscular dystrophy (X-EDMD/EMD). Cytoplasmic localization of emerin in cultured cells or tissues has been reported, although this remains a controversial issue. Tubular aggregates (TAs) are pathological structures seen in the sarcoplasm of human skeletal muscle fibers in various disorders. The TAs derive from the sarcoplasmic reticulum (SR) and represent, probably, an adaptive response of the SR to various insults to the muscle fibers. In the present study, we present immunohistochemical evidence of emerin expression in TAs. Muscle biopsies with tubular aggregates from four male, unrelated patients were studied. The percentage of muscle fibers containing TAs varied between 5 and 20%. Routine histochemistry revealed intense reaction of TAs with NADH-TR, AMPDA, and NSE, but not with COX, SDH, myosin ATPase (pH 9.4, 4.3, 4.6), PAS, and Oil red O staining. Immunohistochemical study revealed strong immunostaining of TAs with antibodies against emerin and 7 SERCA2-ATPase. Immunostaining of TAs was also seen with antibodies against heat shock protein and dysferlin, but not with antibodies to lamin A, dystrophin, adhalin, beta, gamma, delta sarcoglycans, and merosin. These results suggest that emerin, an inner nuclear membrane protein, is present at the TAs. The interpretation and significance of this finding is discussed in relation to experimental data suggesting that normal emerin localization at the inner nuclear membrane depends on lamin A and mutations in the N-terminal domain of emerin cause mislocalization of the protein to the sarcoplasmic membranes.

  5. Detergent-mediated protein aggregation

    PubMed Central

    Neale, Chris; Ghanei, Hamed; Holyoake, John; Bishop, Russell E.; Privé, Gilbert G.; Pomès, Régis

    2016-01-01

    Because detergents are commonly used to solvate membrane proteins for structural evaluation, much attention has been devoted to assessing the conformational bias imparted by detergent micelles in comparison to the native environment of the lipid bilayer. Here, we conduct six 500-ns simulations of a system with >600,000 atoms to investigate the spontaneous self assembly of dodecylphosphocholine detergent around multiple molecules of the integral membrane protein PagP. This detergent formed equatorial micelles in which acyl chains surround the protein’s hydrophobic belt, confirming existing models of the detergent solvation of membrane proteins. In addition, unexpectedly, the extracellular and periplasmic apical surfaces of PagP interacted with the headgroups of detergents in other micelles 85 and 60% of the time, respectively, forming complexes that were stable for hundreds of nanoseconds. In some cases, an apical surface of one molecule of PagP interacted with an equatorial micelle surrounding another molecule of PagP. In other cases, the apical surfaces of two molecules of PagP simultaneously bound a neat detergent micelle. In these ways, detergents mediated the non-specific aggregation of folded PagP. These simulation results are consistent with dynamic light scattering experiments, which show that, at detergent concentrations ≥600 mM, PagP induces the formation of large scattering species that are likely to contain many copies of the PagP protein. Together, these simulation and experimental results point to a potentially generic mechanism of detergent-mediated protein aggregation. PMID:23466535

  6. Excitation transfer pathways in excitonic aggregates revealed by the stochastic Schrödinger equation

    SciTech Connect

    Abramavicius, Vytautas Abramavicius, Darius

    2014-02-14

    We derive the stochastic Schrödinger equation for the system wave vector and use it to describe the excitation energy transfer dynamics in molecular aggregates. We suggest a quantum-measurement based method of estimating the excitation transfer time. Adequacy of the proposed approach is demonstrated by performing calculations on a model system. The theory is then applied to study the excitation transfer dynamics in a photosynthetic pigment-protein Fenna-Matthews-Olson (FMO) aggregate using both the Debye spectral density and the spectral density obtained from earlier molecular dynamics simulations containing strong vibrational high-frequency modes. The obtained results show that the excitation transfer times in the FMO system are affected by the presence of the vibrational modes; however, the transfer pathways remain the same.

  7. Stable J-aggregation enabled dual photoacoustic and fluorescence nanoparticles for intraoperative cancer imaging

    NASA Astrophysics Data System (ADS)

    Shakiba, Mojdeh; Ng, Kenneth K.; Huynh, Elizabeth; Chan, Harley; Charron, Danielle M.; Chen, Juan; Muhanna, Nidal; Foster, F. Stuart; Wilson, Brian C.; Zheng, Gang

    2016-06-01

    J-aggregates display nanoscale optical properties which enable their use in fluorescence and photoacoustic imaging applications. However, control over their optical properties in an in vivo setting is hampered by the conformational lability of the J-aggregate structure in complex biological environments. J-aggregating nanoparticles (JNP) formed by self-assembly of bacteriopheophorbide-lipid (Bchl-lipid) in lipid nanovesicles represents a novel strategy to stabilize J-aggregates for in vivo bioimaging applications. We find that 15 mol% Bchl-lipid embedded within a saturated phospholipid bilayer vesicle was optimal in terms of maximizing Bchl-lipid dye loading, while maintaining a spherical nanoparticle morphology and retaining spectral properties characteristic of J-aggregates. The addition of cholesterol maintains the stability of the J-aggregate absorption band for up to 6 hours in the presence of 90% FBS. In a proof-of-concept experiment, we successfully applied JNPs as a fluorescence contrast agent for real-time intraoperative detection of metastatic lymph nodes in a rabbit head-and-neck cancer model. Lymph node metastasis delineation was further verified by visualizing the JNP within the excised lymph node using photoacoustic imaging. Using JNPs, we demonstrate the possibility of using J-aggregates as fluorescence and photoacoustic contrast agents and may potentially spur the development of other nanomaterials that can stably induce J-aggregation for in vivo cancer bioimaging applications.J-aggregates display nanoscale optical properties which enable their use in fluorescence and photoacoustic imaging applications. However, control over their optical properties in an in vivo setting is hampered by the conformational lability of the J-aggregate structure in complex biological environments. J-aggregating nanoparticles (JNP) formed by self-assembly of bacteriopheophorbide-lipid (Bchl-lipid) in lipid nanovesicles represents a novel strategy to stabilize J-aggregates

  8. Solid-state NMR analysis of membrane proteins and protein aggregates by proton detected spectroscopy

    PubMed Central

    Nieuwkoop, Andrew J.; Berthold, Deborah A.; Comellas, Gemma; Sperling, Lindsay J.; Tang, Ming; Shah, Gautam J.; Brea, Elliott J.; Lemkau, Luisel R.

    2012-01-01

    Solid-state NMR has emerged as an important tool for structural biology and chemistry, capable of solving atomic-resolution structures for proteins in membrane-bound and aggregated states. Proton detection methods have been recently realized under fast magic-angle spinning conditions, providing large sensitivity enhancements for efficient examination of uniformly labeled proteins. The first and often most challenging step of protein structure determination by NMR is the site-specific resonance assignment. Here we demonstrate resonance assignments based on high-sensitivity proton-detected three-dimensional experiments for samples of different physical states, including a fully-protonated small protein (GB1, 6 kDa), a deuterated microcrystalline protein (DsbA, 21 kDa), a membrane protein (DsbB, 20 kDa) prepared in a lipid environment, and the extended core of a fibrillar protein (α-synuclein, 14 kDa). In our implementation of these experiments, including CONH, CO(CA)NH, CANH, CA(CO)NH, CBCANH, and CBCA(CO)NH, dipolar-based polarization transfer methods have been chosen for optimal efficiency for relatively high protonation levels (full protonation or 100 % amide proton), fast magic-angle spinning conditions (40 kHz) and moderate proton decoupling power levels. Each H–N pair correlates exclusively to either intra- or inter-residue carbons, but not both, to maximize spectral resolution. Experiment time can be reduced by at least a factor of 10 by using proton detection in comparison to carbon detection. These high-sensitivity experiments are especially important for membrane proteins, which often have rather low expression yield. Proton-detection based experiments are expected to play an important role in accelerating protein structure elucidation by solid-state NMR with the improved sensitivity and resolution. PMID:22986689

  9. Investigation on effects of aggregate structure in water and wastewater treatment.

    PubMed

    Chau, K W

    2004-01-01

    The fractal structure and particle size of flocs are generally recognized as the two most crucial physical properties having impact on the efficiency of operation of several unit processes in water and wastewater treatment. In this study, an experimental investigation is undertaken on the effect of aggregate structure in water and wastewater treatment in Hong Kong. The fractal dimension of the resulting aggregate is employed as a measure of the aggregate structure. Small angle light scattering technique is used here. Different amounts of polymers are mixed to bacterial suspensions and the resulting structures are examined. The addition of polymer may foster aggregate formation by neutralization of the bacterial surface charge and enhance inter-particle bridging. The aggregation behavior may affect the efficiency of certain water and wastewater treatment processes such as dewatering and coagulation. The impacts of aggregate structure on two representative processes, namely, ultra-filtration membrane fouling and pressure filter dewatering efficiency, are studied. It is found that the looser flocs yield a more porous cake and less tendency to foul whilst more porous filter cakes yield more ready biosolids dewatering.

  10. The Constituents of Roots and Stems of Illigera luzonensis and Their Anti-Platelet Aggregation Effects

    PubMed Central

    Huang, Chieh-Hung; Chan, Yu-Yi; Kuo, Ping-Chung; Chen, Yu-Fon; Chang, Ren-Jie; Chen, Ih-Sheng; Wu, Shwu-Jen; Wu, Tian-Shung

    2014-01-01

    Phytochemical investigation of the roots and stems of Illigera luzonensis afforded two new aporphine alkaloids (1) and (2), one new bisdehydroaporphine alkaloid (3), and one new benzenoid (4), along with 28 known structures. The structures of new compounds were elucidated by spectral and MS analysis. Among the isolated compounds, (1) and (4–13) were subjected into the examination for their inhibitory effects on the aggregation of washed rabbit platelets. PMID:25089876

  11. Photodetectors based on single-walled carbon nanotubes and thiamonomethinecyanine J-aggregates on flexible substrates

    SciTech Connect

    Fedorov, I. V. Emel’yanov, A. V.; Romashkin, A. V.; Bobrinetskiy, I. I.

    2015-09-15

    The present paper is devoted to observations of the photoresistive effect in multilayer structures with a sensitive layer of J-aggregates of thiamonomethinecyanine polymethine dye and a transparent electrode of a conductive carbon-nanotube network on a flexible polyethylenenaphtalate substrate. The effect of narrow-band emission with a wavelength of 465 nm on a change in the conductivity of the fabricated structures is studied. The prepared samples are studied by atomic-force microscopy, Raman spectroscopy, and spectrophotometry methods. It is shown that these structures are photosensitive to the indicated spectral region, and the dye layer is a film of dye J-aggregates. The change in the sample conductivity upon exposure to light one hundred times exceeds the dark conductivity. In general, the principal possibility of developing a photoresistive detector based on J-aggregates of cyanine dyes on flexible supports on account of the use of transparent and conductive carbon-nanotube layers is shown.

  12. Aggregation process of optical properties and temperature over heterogeneous surfaces in infrared domain

    SciTech Connect

    Fontanilles, Guillaume; Briottet, Xavier; Fabre, Sophie; Lefebvre, Sidonie; Vandenhaute, Pierre-Francois

    2010-08-20

    We propose a modeling of the aggregation processes of optical properties and temperature over the heterogeneous landscape in the infrared domain (3-14{mu}m). The main objectives of the modeling are to understand how these parameters aggregate and to study their links at different spatial scales. As the landscape is described at each scale by its radiative parameters, general equations linking the radiative parameters at a given high spatial scale to those at a rough scale are proposed. Then these equations are applied to several synthetic landscapes. An analysis based on a design of experiments is conducted to point out the influence of each of the input factors. The results show the importance of the intrinsic parameters (reflectance, emissivity, and surface temperature) of each surface element and also the directional and spectral behaviors of the aggregated parameters.

  13. [Study on steroidal saponins from Dioscorea zingiberensis and their platelet aggregation activities].

    PubMed

    Wang, Jing-jing; Liu, Yi-xun; Wen, Di; Yu, He-shui; Kang, Li-ping; Pang, Xu; Zhao Yang; Ma, Bai-ping; Chen, Yun-dai

    2014-10-01

    Using the absorbent resin, silica gel and ODS column chromatography as well as semi-preparative HPLC, ten compounds were isolated from 70% ethanol extract of tubers of Dioscorea zingiberensis C. H. Wright, and their structures were elucidated as trigoneoside XIIIa (1), parvifloside (2), trigoneoside IVa (3), deltoside (4), protobioside (5), lilioglycoside k (6), zingiberensis newsaponin I (7), deltonin (8), prosapogenin A of dioscin (9), and trillin (10) on the basis of NMR and MS spectral data analysis. Among these compounds, 1, 3, 5 and 6 were isolated from this plant for the first time. In the screening test on platelet aggregation, compounds 7 and 8 exhibited induction effect on platelet aggregation, while compound 9 exhibited significant inhibitory effect on platelet aggregation in vitro.

  14. Strong plasmon-exciton coupling in a hybrid system of gold nanostars and J-aggregates

    PubMed Central

    2013-01-01

    Hybrid materials formed by plasmonic nanostructures and J-aggregates provide a unique combination of highly localized and enhanced electromagnetic field in metal constituent with large oscillator strength and extremely narrow exciton band of the organic component. The coherent coupling of localized plasmons of the multispiked gold nanoparticles (nanostars) and excitons of JC1 dye J-aggregates results in a Rabi splitting reaching 260 meV. Importantly, broad absorption features of nanostars extending over a visible and near-infrared spectral range allowed us to demonstrate double Rabi splitting resulting from the simultaneous coherent coupling between plasmons of the nanostars and excitons of J-aggregates of two different cyanine dyes. PMID:23522305

  15. Flow Partitioning in Fully Saturated Soil Aggregates

    SciTech Connect

    Yang, Xiaofan; Richmond, Marshall C.; Scheibe, Timothy D.; Perkins, William A.; Resat, Haluk

    2014-03-30

    Microbes play an important role in facilitating organic matter decomposition in soils, which is a major component of the global carbon cycle. Microbial dynamics are intimately coupled to environmental transport processes, which control access to labile organic matter and other nutrients that are needed for the growth and maintenance of microorganisms. Transport of soluble nutrients in the soil system is arguably most strongly impacted by preferential flow pathways in the soil. Since the physical structure of soils can be characterized as being formed from constituent micro aggregates which contain internal porosity, one pressing question is the partitioning of the flow among the “inter-aggregate” and “intra-aggregate” pores and how this may impact overall solute transport within heterogeneous soil structures. The answer to this question is particularly important in evaluating assumptions to be used in developing upscaled simulations based on highly-resolved mechanistic models. We constructed a number of diverse multi-aggregate structures with different packing ratios by stacking micro-aggregates containing internal pores and varying the size and shape of inter-aggregate pore spacing between them. We then performed pore-scale flow simulations using computational fluid dynamics methods to determine the flow patterns in these aggregate-of-aggregates structures and computed the partitioning of the flow through intra- and inter-aggregate pores as a function of the spacing between the aggregates. The results of these numerical experiments demonstrate that soluble nutrients are largely transported via flows through inter-aggregate pores. Although this result is consistent with intuition, we have also been able to quantify the relative flow capacity of the two domains under various conditions. For example, in our simulations, the flow capacity through the aggregates (intra-aggregate flow) was less than 2% of the total flow when the spacing between the aggregates

  16. Acetal phosphatidic acids: novel platelet aggregating agents.

    PubMed

    Brammer, J P; Maguire, M H; Walaszek, E J; Wiley, R A

    1983-05-01

    1 Palmitaldehyde, olealdehyde and linolealdehyde acetal phosphatidic acids induced rapid shape change and dose-dependent biphasic aggregation of human platelets in platelet-rich plasma; aggregation was reversible at low doses and irreversible at high doses of the acetal phosphatidic acids. The palmitaldehyde congener elicited monophasic dose-dependent aggregation of sheep platelets in platelet-rich plasma.2 The threshold concentration for palmitaldehyde acetal phosphatidic acid (PGAP)-induced platelet aggregation was 2.5-5 muM for human platelets and 0.25-0.5 muM for sheep platelets. PGAP was 4-5 times as potent versus human platelets as the olealdehyde and linolealdehyde acetal phosphatidic acids, which were equipotent.3 PGAP-induced irreversible aggregation of [(14)C]-5-hydroxytryptamine ([(14)C]-5-HT)-labelled human platelets in platelet-rich plasma was accompanied by release of 44.0+/-2.4% (s.e.) of the platelet [(14)C]-5-HT; reversible aggregation was not associated with release. In contrast, PGAP-induced release of [(14)C]-5-HT-labelled sheep platelets was dose-dependent.4 The adenosine diphosphate (ADP) antagonist, 2-methylthio-AMP, and the cyclo-oxygenase inhibitor, aspirin, abolished PGAP-induced second phase aggregation and release in human platelets but did not affect the first, reversible, phase of aggregation. Both the first and second phases of PGAP-induced aggregation were abolished by chlorpromazine, by the phospholipase A(2) inhibitor, mepacrine, and by nmolar concentrations of prostaglandin E(1) (PGE(1)); these agents abolished the second, but not the first phase of ADP-induced aggregation.5 The related phospholipids, lecithin, lysolecithin and phosphatidic acid, at <100 muM, neither induced aggregation of human platelets in platelet-rich plasma, nor modified PGAP-induced aggregation; 1-palmityl lysophosphatidic acid elicited aggregation of human platelets at a threshold concentration of 100 muM.6 It is concluded that the acetal phosphatidic acids

  17. Spectral variability on Ceres

    NASA Astrophysics Data System (ADS)

    Erard, Stéphane

    2015-04-01

    Older ground-based observations are reprocessed in order to assess the spectral variability of Ceres surface before the beginning of observations by the Dawn spacecraft. Ceres was observed with NACO on the VLT in 2004 and 2005, producing resolved spectra of the disk under different attitudes. The data cover the range from 0.91-3.80 µm (J, H, K, and L bands), except in the telluric regions. They consist in spectral scans of the dayside, typically with 15 lines of 20 samples, an actual resolution of ~ 100 km, and a spectral resolution R~500 to 1500. A specific calibration scheme has been applied to preprocess the data and to evidence small compositional variations at the surface of Ceres. The major signatures observed are two bands centered at 3.06 and 3.30 µm, which exhibit significant spatial variations at this scale (5 to 10%). These features are best fit by ammoniated minerals (phyllosilicates or feldspars), although the lack of secondary hydration bands seems to rule out phyllosilicates. No significant absorption or variation is observed in J, H and K bands, consistently with [1]. No presence of ices (H2O, C02…) is detected, even at the poles. If Ceres was once rich in ices (e.g., [2]), this suggests a global resurfacing with melting of ices in the subsurface, and alteration under the influence of H2O and perhaps NH3, with reduced production of phyllosilicates. References [1] Carry et al (2012) Icarus 217, 20 [2] McCord, T. B. and C. Sotin (2005) JGR 110, 05009.

  18. DDA Computations of Porous Aggregates with Forsterite Crystals: Effects of Crystal Shape and Crystal Mass Fraction

    NASA Astrophysics Data System (ADS)

    Wooden, Diane H.; Lindsay, Sean S.; Harker, David; Woodward, Charles; Kelley, Michael S. P.; Kolokolova, Ludmilla

    2015-08-01

    Porous aggregate grains are commonly found in cometary dust samples and are needed to model cometary IR spectral energy distributions (SEDs). Models for thermal emissions from comets require two forms of silicates: amorphous and crystalline. The dominant crystal resonances observed in comet SEDs are from Forsterite (Mg2SiO4). The mass fractions that are crystalline span a large range from 0.0 ≤ fcrystal ≤ 0.74. Radial transport models that predict the enrichment of the outer disk (>25 AU at 1E6 yr) by inner disk materials (crystals) are challenged to yield the highend-range of cometary crystal mass fractions. However, in current thermal models, Forsterite crystals are not incorporated into larger aggregate grains but instead only are considered as discrete crystals. A complicating factor is that Forsterite crystals with rectangular shapes better fit the observed spectral resonances in wavelength (11.0-11.15 μm, 16, 19, 23.5, 27, and 33 μm), feature asymmetry and relative height (Lindley et al. 2013) than spherically or elliptically shaped crystals. We present DDA-DDSCAT computations of IR absorptivities (Qabs) of 3 μm-radii porous aggregates with 0.13 ≤ fcrystal ≤ 0.35 and with polyhedral-shaped Forsterite crystals. We can produce crystal resonances with similar appearance to the observed resonances of comet Hale-Bopp. Also, a lower mass fraction of crystals in aggregates can produce the same spectral contrast as a higher mass fraction of discrete crystals; the 11µm and 23 µm crystalline resonances appear amplified when crystals are incorporated into aggregates composed otherwise of spherically shaped amorphous Fe-Mg olivines and pyroxenes. We show that the optical properties of a porous aggregate is not linear combination of its monomers, so aggregates need to be computed. We discuss the consequence of lowering comet crystal mass fractions by modeling IR SEDs with aggregates with crystals, and the implications for radial transport models of our

  19. Succession of Protists on Estuarine Aggregates.

    PubMed

    Wörner; Zimmerman-Timm; Kausch

    2000-08-01

    Colonization by and succession of bacteria and bacterivorous protists on laboratory-made aggregates were determined over a period of 14 days during winter and spring in 1997. Aggregates were generated from natural water from the limnetic zone of the Elbe Estuary using a tilting tube roller system. Within 1 h after the beginning of the experiments, macroaggregates started to form. Aggregates reached a maximum size of 1 mm with a tendency toward large sizes at the end of the experiment after the 10th day. On the first day, high bacterial densities of more than 10(9) cells ml(-1) were detected within the aggregates. The abundances of flagellates and ciliates within aggregates were also two or three orders of magnitude higher than in the surrounding water. Densities of aggregate associated organisms are comparable to those occuring in sediments. The first protistan colonizers on the aggregates were small heterotrophic flagellates, such as choanoflagellates and small euglenids. Later, beginning on the 4th day, small sarcodines and ciliates became abundant. The most abundant ciliates associated with aggregates were small species of the Hypotrichia, Cyrtophorida, and Hymenostomata. After 9 days, large omnivorous and carnivorous ciliates, such as large members of the Hypotrichia and the Pleurostomatida, occurred. In spring, large heterotrophic flagellates and amebae also appeared at this time. These findings indicated the existence of a succession of protists on newly formed aggregates and a microbial food net within the aggregates based on bacterial production. Additionally, most of the species observed during this study were adapted for living on surfaces. In natural environments they are more common in benthic than in pelagic environments. For them, aggregates are havens in the water column comparable to sediment communities.

  20. Preformed Seeds Modulate Native Insulin Aggregation Kinetics.

    PubMed

    Dutta, Colina; Yang, Mu; Long, Fei; Shahbazian-Yassar, Reza; Tiwari, Ashutosh

    2015-12-10

    Insulin aggregates under storage conditions via disulfide interchange reaction. It is also known to form aggregates at the site of repeated injections in diabetes patients, leading to injection amyloidosis. This has fueled research in pharmaceutical and biotechnology industry as well as in academia to understand factors that modulate insulin stability and aggregation. The main aim of this study is to understand the factors that modulate aggregation propensity of insulin under conditions close to physiological and measure effect of "seeds" on aggregation kinetics. We explored the aggregation kinetics of insulin at pH 7.2 and 37 °C in the presence of disulfide-reducing agent dithiothreitol (DTT), using spectroscopy (UV-visible, fluorescence, and Fourier transform infrared spectroscopy) and microscopy (scanning electron microscopy, atomic force microscopy) techniques. We prepared insulin "seeds" by incubating disulfide-reduced insulin at pH 7.2 and 37 °C for varying lengths of time (10 min to 12 h). These seeds were added to the native protein and nucleation-dependent aggregation kinetics was measured. Aggregation kinetics was fastest in the presence of 10 min seeds suggesting they were nascent. Interestingly, intermediate seeds (30 min to 4 h incubation) resulted in formation of transient fibrils in 4 h that converted to amorphous aggregates upon longer incubation of 24 h. Overall, the results show that insulin under disulfide reducing conditions at pH and temperature close to physiological favors amorphous aggregate formation and seed "maturity" plays an important role in nucleation dependent aggregation kinetics.

  1. Direct cellular delivery of human proteasomes to delay tau aggregation.

    PubMed

    Han, Dong Hoon; Na, Hee-Kyung; Choi, Won Hoon; Lee, Jung Hoon; Kim, Yun Kyung; Won, Cheolhee; Lee, Seung-Han; Kim, Kwang Pyo; Kuret, Jeff; Min, Dal-Hee; Lee, Min Jae

    2014-01-01

    The 26S proteasome is the primary machinery that degrades ubiquitin (Ub)-conjugated proteins, including many proteotoxic proteins implicated in neurodegeneraton. It has been suggested that the elevation of proteasomal activity is tolerable to cells and may be beneficial to prevent the accumulation of protein aggregates. Here we show that purified proteasomes can be directly transported into cells through mesoporous silica nanoparticle-mediated endocytosis. Proteasomes that are loaded onto nanoparticles through non-covalent interactions between polyhistidine tags and nickel ions fully retain their proteolytic activity. Cells treated with exogenous proteasomes are more efficient in degrading overexpressed human tau than endogenous proteasomal substrates, resulting in decreased levels of tau aggregates. Moreover, exogenous proteasome delivery significantly promotes cell survival against proteotoxic stress caused by tau and reactive oxygen species. These data demonstrate that increasing cellular proteasome activity through the direct delivery of purified proteasomes may be an effective strategy for reducing cellular levels of proteotoxic proteins. PMID:25476420

  2. Desorption and use of saturated lightweight aggregate in internal curing

    NASA Astrophysics Data System (ADS)

    Briatka, P.; Makýš, P.

    2011-09-01

    Roughly 20 years ago there was a brand new concrete-curing concept presented in the U.S. based on providing "extra curing" water from inside the concrete. The extra water shoul be added to concrete during mixing, but is bound to some kind of carrier, so it does not alter the water-cement ratio. This technique, known as Internal Curing (IC) keeps the cement paste moist from the first moment when it normally would start to desiccate and is not mature enough to apply conventional means of curing. The durability and effectiveness of IC depend on the boundary conditions at the site as well as the properties of the carrier - in this case, Lightweight Aggregate (LWA), which, after the water soaking, replaces some part of the Normalweight Aggregate (NWA). This work deals with LWA (available on the European market) in the context of its properties affecting the efficiency of IC.

  3. Aggregation of Silver Hydrosols Prepared in Air.

    PubMed

    Teiten; Burneau

    1998-10-01

    The chemistry involved in the preparation and activation of silver hydrosols was monitored by pH, potential, and surface charge measurements, by absorption spectra in the visible region, and by surface-enhanced Raman spectroscopy (SERS). The activation, displayed by a red-shift of the colloid absorption at 392 nm, corresponds to a partial aggregation of elementary silver particles as displayed by transmission electron micrographs. The participation of carbonate species in the chemistry of hydrosols handled in air was made obvious by titration with strong acids. The colloid destabilization was performed either with protons, by adding strong non-complexing acids (HNO3, HClO4), or with low concentrations of Cu2+. In contrast, HCl determined a stabilization of hydrosols related to the complexing affinity of Cl- toward silver. The successive addition of Cu(NO3)2 and HCl allowed a balance between all the chemical reactions and a very efficient activation process. Whereas the chemical reactants used are nominally inorganic, at total concentrations lower than 10(-3) M, the activated hydrosols display anomalous SER spectra which were previously assigned to organic molecules. Copyright 1998 Academic Press.

  4. Ensuring Machine and Tractor Aggregates Operability

    NASA Astrophysics Data System (ADS)

    Redreev, G. V.

    2016-08-01

    the operability of the machine and tractor aggregates is ensured by processes which occur in machine units and considered as technical systems. In order to develop theoretical understanding of the processes in technical systems as the basis and purpose of the repairserving actions, the author's concept is presented which relies on on the basic concepts of "processes in technical systems", "maintenance and repair of performers", "maintenance and repair of technology" "objectives of the maintenance and repair". Analysis of the basic concepts of "processes in technical systems" made possible to distinguishing four types of relations: of order, stipulation, exactingness, and non-contradiction. It is shown that the implementation of maintenance and repair of technology should be conducted according to the assessment of the effectiveness of processes in technical systems, revealed in complex diagnosis. The perfection of the design of the machine in terms of its technical operation can be estimated according to the degree of consistency of processes in technical systems, purposes of maintenance and repair. In order to increase the efficiency of the lubrication system,the modernised design of the centrifugal oil filter with permanent control of its cleaning power is offered, which allows changing the technology of the maintenance of engine lubrication system by separating the operations of crankcase oil replacement and the rotor filter cleaning.

  5. Population balance modelling of particle flocculation with attention to aggregate restructuring and permeability.

    PubMed

    Jeldres, Ricardo I; Concha, Fernando; Toledo, Pedro G

    2015-10-01

    A population balance model based on a detailed literature review is used to describe coagulation and flocculation kinetics as well as the time evolution of aggregate size distribution in a turbulent shear flow simultaneously with the breakage and restructuring of aggregates. The fractal nature and permeability of the aggregates and their evolution with time are also part of the model. Restructuring is absent in coagulation with soluble salts, but is present in flocculation caused by large polyelectrolyte molecules; in the latter, aggregates never reach a steady-state size, but a size that decreases gradually through particle and polymer rearrangement. The model is tested against available experimental data for monodisperse polystyrene particles coagulated with hydrated aluminium sulphate at different shear rates, and precipitated calcium carbonate flocculated with a cationic polyelectrolyte of very high molecular weight at different flocculant dosages. The numerical solution of the model requires adjusting three parameters, i.e, maximum collision efficiency (αmax), critical force needed for the breakage of the aggregates (B) and rate of aggregate restructuring (γ), which are obtained from minimising the difference between experimental data and model predictions. The model studied for the two very different systems shows excellent agreement with experimental flocculation kinetics and a reasonably good fit for aggregate size distributions. The model is most sensitive to the fragmentation rate through parameter B, somewhat less to the collision efficiency through parameter αmax and little to γ. When the aggregates undergo restructuring, properties such as permeability, breakage rate and collision rate change considerably over time. When the aggregates are permeable, the collision frequency is significantly smaller than when they are impervious. PMID:26253811

  6. 24 CFR 58.32 - Project aggregation.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... other activities and actions. (See 40 CFR 1508.25(a)). (2) Consider reasonable alternative courses of... 24 Housing and Urban Development 1 2014-04-01 2014-04-01 false Project aggregation. 58.32 Section... Environmental Review Process: Documentation, Range of Activities, Project Aggregation and Classification §...

  7. 24 CFR 58.32 - Project aggregation.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... other activities and actions. (See 40 CFR 1508.25(a)). (2) Consider reasonable alternative courses of... 24 Housing and Urban Development 1 2012-04-01 2012-04-01 false Project aggregation. 58.32 Section... Environmental Review Process: Documentation, Range of Activities, Project Aggregation and Classification §...

  8. 48 CFR 514.270 - Aggregate awards.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 48 Federal Acquisition Regulations System 4 2010-10-01 2010-10-01 false Aggregate awards. 514.270 Section 514.270 Federal Acquisition Regulations System GENERAL SERVICES ADMINISTRATION CONTRACTING METHODS AND CONTRACT TYPES SEALED BIDDING Solicitation of Bids 514.270 Aggregate awards....

  9. Streaming instability of aggregating slime mold amoebae

    NASA Astrophysics Data System (ADS)

    Levine, Herbert; Reynolds, William

    1991-05-01

    We propose a new model of aggregation in the cellular slime mold D. Discoideum. Our approach couples the excitable signaling system to amoeba chemotaxis; the resultant system of equations is tractable to analytical and numerical approaches. Using our model, we derive the existence of a streaming instability for the concentric target aggregation pattern.

  10. 24 CFR 58.32 - Project aggregation.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... Environmental Review Process: Documentation, Range of Activities, Project Aggregation and Classification § 58.32... the total project must be listed and described by the responsible entity in the environmental review... 24 Housing and Urban Development 1 2010-04-01 2010-04-01 false Project aggregation. 58.32...

  11. 24 CFR 58.32 - Project aggregation.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... Environmental Review Process: Documentation, Range of Activities, Project Aggregation and Classification § 58.32... the total project must be listed and described by the responsible entity in the environmental review... 24 Housing and Urban Development 1 2011-04-01 2011-04-01 false Project aggregation. 58.32...

  12. Choosing Aggregation Rules for Composite Indicators

    ERIC Educational Resources Information Center

    Munda, Giuseppe

    2012-01-01

    From a formal point of view, a composite indicator is an aggregate of all dimensions, objectives, individual indicators and variables used for its construction. This implies that what defines a composite indicator is the set of properties underlying its mathematical aggregation convention. In this article, I try to revise the theoretical debate on…

  13. Teaching Aggregate Demand and Supply Models

    ERIC Educational Resources Information Center

    Wells, Graeme

    2010-01-01

    The author analyzes the inflation-targeting model that underlies recent textbook expositions of the aggregate demand-aggregate supply approach used in introductory courses in macroeconomics. He shows how numerical simulations of a model with inflation inertia can be used as a tool to help students understand adjustments in response to demand and…

  14. 7 CFR 1.6 - Aggregating requests.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 1 2010-01-01 2010-01-01 false Aggregating requests. 1.6 Section 1.6 Agriculture Office of the Secretary of Agriculture ADMINISTRATIVE REGULATIONS Official Records § 1.6 Aggregating requests. When an agency reasonably believes that a requester, or a group of requesters acting in...

  15. 42 CFR 411.106 - Aggregation rules.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 42 Public Health 2 2010-10-01 2010-10-01 false Aggregation rules. 411.106 Section 411.106 Public Health CENTERS FOR MEDICARE & MEDICAID SERVICES, DEPARTMENT OF HEALTH AND HUMAN SERVICES MEDICARE PROGRAM... Under Group Health Plans: General Provisions § 411.106 Aggregation rules. The following rules apply...

  16. 7 CFR 1.6 - Aggregating requests.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 7 Agriculture 1 2013-01-01 2013-01-01 false Aggregating requests. 1.6 Section 1.6 Agriculture Office of the Secretary of Agriculture ADMINISTRATIVE REGULATIONS Official Records § 1.6 Aggregating requests. When an agency reasonably believes that a requester, or a group of requesters acting in...

  17. Biomass round bales infield aggregation logistic scenarios

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Biomass bales often need to be aggregated (collected into groups and transported) to a field-edge stack for temporary storage for feedlots or processing facilities. Aggregating the bales with the least total distance involved is a goal of producers and bale handlers. Several logistics scenarios for ...

  18. Brain tumor segmentation in MRI based on fuzzy aggregators

    NASA Astrophysics Data System (ADS)

    Zhu, Yan; Liao, Qingmin; Dou, Weibei; Ruan, Su

    2005-07-01

    Magnetic Resonance Image (MRI) is widely used in radiology diagnosis, especially in pathology detection in human brain. Most of the methods now applied to automatically segment brain tumors rely on T1-weighted sequences exclusively despite the fact that the imaging agent is multi-spectral. The work focuses on the integration or fusion of information provided by each sequence, i.e. T1, T2 and PD. Based on the fuzzy aggregators proposed in fuzzy theory, a system integrating all these information is established. The paper discusses some famous operators, their properties and application in tumor segmentation. In particular, Davies-Bouldin index is used to determine the parameters of the parametric operations. The result shows the importance of data fusion in segmentation process, discovers that T-norms are less robust to noise compared with mean operators. Meanwhile, weights allocated illustrate the order of importance of each spectrum in pathology detection, and are in agreement with their characteristic.

  19. Spectral Element Agglomerate AMGe

    SciTech Connect

    Chartier, T; Falgout, R; Henson, V E; Jones, J E; Vassilevski, P S; Manteuffel, T A; McCormick, S F; Ruge, J W

    2005-05-20

    The purpose of this note is to describe an algorithm resulting from the uniting of two ideas introduced and applied elsewhere. For many problems, AMG has always been difficult due to complexities whose natures are difficult to discern from the entries of matrix A alone. Element-based interpolation has been shown to be an effective method for some of these problems, but it requires access to the element matrices on all levels. One way to obtain these has been to perform element agglomeration to form coarse elements, but in complicated situations defining the coarse degrees of freedom (dofs) is not easy. The spectral approach to coarse dof selection is very attractive due to its elegance and simplicity. The algorithm presented here combines the robustness of element interpolation, the ease of coarsening by element agglomeration, and the simplicity of defining coarse dofs through the spectral approach. As demonstrated in the numerical results, the method does yield a reasonable solver for the problems described. It can, however, be an expensive method due to the number and cost of the local, small dense linear algebra problems; making it a generally competitive method remains an area for further research.

  20. OSSE spectral analysis techniques

    NASA Technical Reports Server (NTRS)

    Purcell, W. R.; Brown, K. M.; Grabelsky, D. A.; Johnson, W. N.; Jung, G. V.; Kinzer, R. L.; Kroeger, R. A.; Kurfess, J. D.; Matz, S. M.; Strickman, M. S.

    1992-01-01

    Analysis of the spectra from the Oriented Scintillation Spectrometer Experiment (OSSE) is complicated because of the typically low signal to noise (approx. 0.1 percent) and the large background variability. The OSSE instrument was designed to address these difficulties by periodically offset-pointing the detectors from the source to perform background measurements. These background measurements are used to estimate the background during each of the source observations. The resulting background-subtracted spectra can then be accumulated and fitted for spectral lines and/or continua. Data selection based on various environmental parameters can be performed at various stages during the analysis procedure. In order to achieve the instrument's statistical sensitivity, however, it will be necessary for investigators to develop a detailed understanding of the instrument operation, data collection, and the background spectrum and its variability. A brief description of the major steps in the OSSE spectral analysis process is described, including a discussion of the OSSE background spectrum and examples of several observational strategies.

  1. Refining spectral library searching.

    PubMed

    Rudnick, Paul A

    2013-11-01

    Spectral library searching has many advantages over sequence database searching, yet it has not been widely adopted. One possible reason for this is that users are unsure exactly how to interpret the similarity scores (e.g., "dot products" are not probability-based scores). Methods to create decoys have been proposed, but, as developers caution, may produce proxies that are not equivalent to reversed sequences. In this issue, Shao et al. (Proteomics 2013, 13, 3273-3283) report advances in spectral library searching where the focus is not on improving the performance of their search engine, SpectraST, but is instead on improving the statistical meaningfulness of its discriminant score and removing the need for decoys. The results in their paper indicate that by "standardizing" the input and library spectra, sensitivity is not lost but is, surprisingly, gained. Their tests also show that false discovery rate (FDR) estimates, derived from their new score, track better with "ground truth" than decoy searching. It is possible that their work strikes a good balance between the theory of library searching and its application. And as such, they hope to have removed a major entrance barrier for some researchers previously unwilling to try library searching.

  2. A coarse-grained spectral signature generator

    NASA Astrophysics Data System (ADS)

    Lam, K. P.; Austin, J. C.; Day, C. R.

    2007-01-01

    This paper investigates the method for object fingerprinting in the context of element specific x-ray imaging. In particular, the use of spectral descriptors that are illumination invariant and viewpoint independent for pattern identification was examined in some detail. To improve generating the relevant "signature", the spectral descriptor constructed is enhanced with a differentiator which has built-in noise filtration capability and good localisation properties, thus facilitating the extraction of element specific features at a coarse-grained level. In addition to the demonstrable efficacy in identifying significant image intensity transitions that are associated with the underlying physical process of interest, the method has the distinct advantage of being conceptually simple and computationally efficient. These latter properties allow the descriptor to be further utilised by an intelligent system capable of performing a fine-grained analysis of the extracted pattern signatures. The performance of the spectral descriptor has been studied in terms of the quality of the signature vectors that it generated, quantitatively based on the established framework of Spectral Information Measure (SIM). Early results suggested that such a multiscale approach of image sequence analysis offers a considerable potential for real-time applications.

  3. HARP: A Dynamic Inertial Spectral Partitioner

    NASA Technical Reports Server (NTRS)

    Simon, Horst D.; Sohn, Andrew; Biswas, Rupak

    1997-01-01

    Partitioning unstructured graphs is central to the parallel solution of computational science and engineering problems. Spectral partitioners, such recursive spectral bisection (RSB), have proven effecfive in generating high-quality partitions of realistically-sized meshes. The major problem which hindered their wide-spread use was their long execution times. This paper presents a new inertial spectral partitioner, called HARP. The main objective of the proposed approach is to quickly partition the meshes at runtime in a manner that works efficiently for real applications in the context of distributed-memory machines. The underlying principle of HARP is to find the eigenvectors of the unpartitioned vertices and then project them onto the eigerivectors of the original mesh. Results for various meshes ranging in size from 1000 to 100,000 vertices indicate that HARP can indeed partition meshes rapidly at runtime. Experimental results show that our largest mesh can be partitioned sequentially in only a few seconds on an SP2 which is several times faster than other spectral partitioners while maintaining the solution quality of the proven RSB method. A parallel WI version of HARP has also been implemented on IBM SP2 and Cray T3E. Parallel HARP, running on 64 processors SP2 and T3E, can partition a mesh containing more than 100,000 vertices into 64 subgrids in about half a second. These results indicate that graph partitioning can now be truly embedded in dynamically-changing real-world applications.

  4. Recycling of construction debris as aggregate in the Mid-Atlantic Region, USA

    USGS Publications Warehouse

    Robinson, G.R.; Menzie, W.D.; Hyun, H.

    2004-01-01

    Reclaimed asphalt pavement (RAP) and portland cement concrete (RPCC) are abundant and available substitutes for natural aggregate in many areas. This paper presents an overview of factors that affect recycled aggregate cost, availability, and engineering performance, and the results of a survey of business practices in the Mid-Atlantic region. For RAP, processing costs are less than those for virgin natural aggregate. Use of efficient asphalt pavement stripping technology, on-site reclamation, and linked two-way transport of asphalt debris and processed asphalt paving mix between asphalt mix plants and paving sites has led to extensive recycling of asphalt pavement in the Mid-Atlantic region of the US. Most of the sites that recycle asphalt pavement (RAP) are located in or near urban areas close to important transportation corridors. RPCC is a viable aggregate source in urban settings where unit costs for processed aggregate from RPCC and natural aggregate are comparable. Disposal fees charged at RPCC recycling sites help defray processing costs and the significantly lower tipping fees at recycling sites versus landfill disposal sites encourage recycling of construction debris as aggregate. Construction contractors and construction debris recycling centers, many of which have the ability to crush and process concrete debris at the job site, produce most RPCC. Production of RPCC aggregate from construction debris that is processed on site using portable equipment moved to the construction site eliminates transportation costs for aggregate and provides an economic incentive for RPCC use. Processing costs, quality and performance issues, and lack of large quantities where needed limit RPCC use. Most RPCC suppliers in the Mid-Atlantic area are located in counties with population densities greater than 400 people/km2 (1036 people/mile2) and that have high unit-value costs and limited local availability of natural aggregate. ?? 2004 Published by Elsevier B.V.

  5. Aggregate size distribution of the soil loss

    NASA Astrophysics Data System (ADS)

    Szabó, Judit Alexandra; Jakab, Gergely; Szabó, Boglárka; Józsa, Sándor; Szalai, Zoltán; Centeri, Csaba

    2016-04-01

    In agricultural areas the soil erosion and soil loss estimation is vital information in long-term planning. During the initial period of the erosion a part of the soil particles and aggregates get transportable and nutrients and organic matter could be transported due to the effect of water or wind. This preliminary phase was studied with laboratory-scale rainfall simulator. Developed surface crust and aggregate size composition of the runoff was examined in six different slope-roughness-moisture content combination of a Cambisol and a Regosol. The ratio of micro- and macro aggregates in the runoff indicate the stability of the aggregates and determine the transport capacity of the runoff. Both soil samples were taken from field where the water erosion is a potential hazard. During the experiment the whole amount of runoff and sediment was collected through sieve series to a bucket to separate the micro- and macro aggregates. In case of both samples the micro aggregates dominate in the runoff and the runoff rates are similar. Although the runoff of the Regosol - with dominant >1000μm macro aggregate content - contained almost nothing but <50μm sized micro aggregates. Meanwhile the runoff of the Cambisol - with more balanced micro and macro aggregate content - contained dominantly 50-250μm sized micro aggregates and in some case remarkable ratio 250-1000μm sized macro aggregates. This difference occurred because the samples are resistant against drop erosion differently. In case of both sample the selectivity of the erosion and substance matrix redistribution manifested in mineral crusts in the surface where the quartz deposited in place while the lighter organic matter transported with the sediment. The detachment of the aggregates and the redistribution of the particles highly effect on the aggregate composition of the runoff which is connected with the quality of the soil loss. So while the estimation of soil loss quantity is more or less is easy, measuring

  6. Therapeutic Protein Aggregation: Mechanisms, Design, and Control

    PubMed Central

    Roberts, Christopher J.

    2014-01-01

    While it is well known that proteins are only marginally stable in their folded states, it is often less well appreciated that most proteins are inherently aggregation-prone in their unfolded or partially unfolded states, and the resulting aggregates can be extremely stable and long-lived. For therapeutic proteins, aggregates are a significant risk factor for deleterious immune responses in patients, and can form via a variety of mechanisms. Controlling aggregation using a mechanistic approach may allow improved design of therapeutic protein stability, as a complement to existing design strategies that target desired protein structures and function. Recent results highlight the importance of balancing protein environment with the inherent aggregation propensities of polypeptide chains. PMID:24908382

  7. CHARGING OF AGGREGATE GRAINS IN ASTROPHYSICAL ENVIRONMENTS

    SciTech Connect

    Ma, Qianyu; Matthews, Lorin S.; Hyde, Truell W.; Land, Victor

    2013-02-15

    The charging of dust grains in astrophysical environments has been investigated with the assumption that these grains are homogeneous spheres. However, there is evidence which suggests that many grains in astrophysical environments are irregularly shaped aggregates. Recent studies have shown that aggregates acquire higher charge-to-mass ratios due to their complex structures, which in turn may alter their subsequent dynamics and evolution. In this paper, the charging of aggregates is examined including secondary electron emission and photoemission in addition to primary plasma currents. The results show that the equilibrium charge on aggregates can differ markedly from spherical grains with the same mass, but that the charge can be estimated for a given environment based on structural characteristics of the grain. The 'small particle effect' due to secondary electron emission is also important for de terming the charge of micron-sized aggregates consisting of nano-sized particles.

  8. Competitive aggregation dynamics using phase wave signals.

    PubMed

    Sakaguchi, Hidetsugu; Maeyama, Satomi

    2014-10-21

    Coupled equations of the phase equation and the equation of cell concentration n are proposed for competitive aggregation dynamics of slime mold in two dimensions. Phase waves are used as tactic signals of aggregation in this model. Several aggregation clusters are formed initially, and target patterns appear around the localized aggregation clusters. Owing to the competition among target patterns, the number of the localized aggregation clusters decreases, and finally one dominant localized pattern survives. If the phase equation is replaced with the complex Ginzburg-Landau equation, several spiral patterns appear, and n is localized near the center of the spiral patterns. After the competition among spiral patterns, one dominant spiral survives. PMID:24956327

  9. Formation of Tethers from Spreading Cellular Aggregates.

    PubMed

    Beaune, Grégory; Winnik, Françoise M; Brochard-Wyart, Françoise

    2015-12-01

    Membrane tubes are commonly extruded from cells and vesicles when a point-like force is applied on the membrane. We report here the unexpected formation of membrane tubes from lymph node cancer prostate (LNCaP) cell aggregates in the absence of external applied forces. The spreading of LNCaP aggregates deposited on adhesive glass substrates coated with fibronectin is very limited because cell-cell adhesion is stronger than cell-substrate adhesion. Some cells on the aggregate periphery are very motile and try to escape from the aggregate, leading to the formation of membrane tubes. Tethered networks and exchange of cargos between cells were observed as well. Growth of the tubes is followed by either tube retraction or tube rupture. Hence, even very cohesive cells are successful in escaping aggregates, which may lead to epithelial mesenchymal transition and tumor metastasis. We interpret the dynamics of formation and retraction of tubes in the framework of membrane mechanics. PMID:26509898

  10. Imbibition kinetics of spherical colloidal aggregates.

    PubMed

    Debacker, A; Makarchuk, S; Lootens, D; Hébraud, P

    2014-07-11

    The imbibition kinetics of a millimeter-sized aggregate of 300 nm diameter colloidal particles by a wetting pure solvent is studied. Three successive regimes are observed. First, the imbibition proceeds by compressing the air inside the aggregate. Next, the solvent stops when the pressure of the compressed air is equal to the excess of capillary pressure at the meniscus of the wetting solvent in the porous aggregate. The interface is pinned and the aggregate slowly degases up to the point where the pressure of the entrapped air stops decreasing and is controlled by the capillary pressure. Finally, the imbibition starts again at a constant excess of pressure, smaller than the capillary pressure but larger than the one of the atmosphere. This last stage leads to the complete infiltration of the aggregate. PMID:25062241

  11. Reconsidering the mechanism of polyglutamine peptide aggregation.

    PubMed

    Lee, Christine C; Walters, Robert H; Murphy, Regina M

    2007-11-01

    There are at least nine neurodegenerative diseases associated with proteins that contain an unusually expanded polyglutamine domain, the best known of which is Huntington's disease. In all of these diseases, the mutant protein aggregates into neuronal inclusions; it is generally, although not universally, believed that protein aggregation is an underlying cause of the observed neuronal degeneration. In an effort to examine the role of polyglutamine in facilitating protein aggregation, investigators have used synthetic polyglutamine peptides as model systems. Analysis of kinetic data led to the conclusions that aggregation follows a simple nucleation-elongation mechanism characterized by a significant lag time, during which the peptide is monomeric, and that the nucleus is a monomer in a thermodynamically unfavorable conformation [Chen, S. M., et al. (2002) Proc. Natl. Acad. Sci. U.S.A. 99, 11884-11889]. We re-examined this hypothesis by measuring the aggregation kinetics of the polyglutamine peptide K2Q23K2, using sedimentation, static and dynamic light scattering, and size exclusion chromatography. Our data show that during the lag time in sedimentation kinetics, there is substantial organization of the peptide into soluble linear aggregates. These aggregates have no regular secondary structure as measured by circular dichroism but have particle dimensions and morphologies similar to those of mature insoluble aggregates. The soluble aggregates constitute approximately 30% of the total peptide mass, form rapidly, and continue to grow over a period of hours to days, eventually precipitating. Once insoluble aggregates form, loss of monomer from the solution phase continues. Our data support an assembly mechanism for polyglutamine peptide more complex than that previously proposed.

  12. Classification and Characterization of Therapeutic Antibody Aggregates

    PubMed Central

    Joubert, Marisa K.; Luo, Quanzhou; Nashed-Samuel, Yasser; Wypych, Jette; Narhi, Linda O.

    2011-01-01

    A host of diverse stress techniques was applied to a monoclonal antibody (IgG2) to yield protein particles with varying attributes and morphologies. Aggregated solutions were evaluated for percent aggregation, particle counts, size distribution, morphology, changes in secondary and tertiary structure, surface hydrophobicity, metal content, and reversibility. Chemical modifications were also identified in a separate report (Luo, Q., Joubert, M. K., Stevenson, R., Narhi, L. O., and Wypych, J. (2011) J. Biol. Chem. 286, 25134–25144). Aggregates were categorized into seven discrete classes, based on the traits described. Several additional molecules (from the IgG1 and IgG2 subtypes as well as intravenous IgG) were stressed and found to be defined with the same classification system. The mechanism of protein aggregation and the type of aggregate formed depends on the nature of the stress applied. Different IgG molecules appear to aggregate by a similar mechanism under the same applied stress. Aggregates created by harsh mechanical stress showed the largest number of subvisible particles, and the class generated by thermal stress displayed the largest number of visible particles. Most classes showed a disruption of the higher order structure, with the degree of disorder depending on the stress process. Particles in all classes (except thermal stress) were at least partially reversible upon dilution in pH 5 buffer. High copper content was detected in isolated metal-catalyzed aggregates, a stress previously shown to produce immunogenic aggregates. In conclusion, protein aggregates can be a very heterogeneous population, whose qualities are the result of the type of stress that was experienced. PMID:21454532

  13. Sans study of asphaltene aggregation

    SciTech Connect

    Overfield, R.E.; Sheu, E.Y.; Sinha, S.K.; Liang, K.S. )

    1988-06-01

    The colloidal properties of asphaltenes have long been recognized from peculiarities in their solubility and colligative properties. A layered micellar model or asphaltenes was proposed by others in which a highly condensed alkyl aromatic formed the central part, and molecules of decreasingly aromatic character (resins) clustered around them. Numerous studies, based on a variety of techniques such as ultracentrifugation and electron microscopy indicated a particulate nature for asphaltenes with size 20-40 A diameter. Others have proposed a refined model based on x-ray diffraction and small angle scattering. In this model, interactions between flat sheets of condensed aromatic rings form the central ''crystallite'' part of a spherical particle with the outer part being comprised of the aliphatic positions of the same molecules. These particles are bunched together with some degree of entanglement into ''micelles''. Concentration and solvent dependent radii of gyration, ranging from 30-50 A were reported. The aggregation creates a good deal of uncertainty as to the true molecular size or weight of asphaltenes. Neutron scattering offers novel contrast relative to light scattering (refractive index) and x-ray scattering (electron density). This is because the scattering length of proton is negative, whereas that from deuterium and other nuclei such as C, S, O, and N are positive. Thus by replacing hydrogen with deuterium in either the solvent or the scatterer the contrast can be varied, and different parts of the molecule can be highlighted.

  14. Anisotropic diffusion-limited aggregation.

    PubMed

    Popescu, M N; Hentschel, H G E; Family, F

    2004-06-01

    Using stochastic conformal mappings, we study the effects of anisotropic perturbations on diffusion-limited aggregation (DLA) in two dimensions. The harmonic measure of the growth probability for DLA can be conformally mapped onto a constant measure on a unit circle. Here we map m preferred directions for growth to a distribution on the unit circle, which is a periodic function with m peaks in [-pi,pi) such that the angular width sigma of the peak defines the "strength" of anisotropy kappa= sigma(-1) along any of the m chosen directions. The two parameters (m,kappa) map out a parameter space of perturbations that allows a continuous transition from DLA (for small enough kappa ) to m needlelike fingers as kappa--> infinity. We show that at fixed m the effective fractal dimension of the clusters D(m,kappa) obtained from mass-radius scaling decreases with increasing kappa from D(DLA) approximately 1.71 to a value bounded from below by D(min) = 3 / 2. Scaling arguments suggest a specific form for the dependence of the fractal dimension D(m,kappa) on kappa for large kappa which compares favorably with numerical results. PMID:15244564

  15. Spectral entropy criteria for structural segmentation in genomic DNA sequences

    NASA Astrophysics Data System (ADS)

    Chechetkin, V. R.; Lobzin, V. V.

    2004-07-01

    The spectral entropy is calculated with Fourier structure factors and characterizes the level of structural ordering in a sequence of symbols. It may efficiently be applied to the assessment and reconstruction of the modular structure in genomic DNA sequences. We present the relevant spectral entropy criteria for the local and non-local structural segmentation in DNA sequences. The results are illustrated with the model examples and analysis of intervening exon-intron segments in the protein-coding regions.

  16. Nonlinear Spectral-Spatial Control and Localization of Supercontinuum Radiation

    NASA Astrophysics Data System (ADS)

    Neshev, Dragomir N.; Sukhorukov, Andrey A.; Dreischuh, Alexander; Fischer, Robert; Ha, Sangwoo; Bolger, Jeremy; Bui, Lam; Krolikowski, Wieslaw; Eggleton, Benjamin J.; Mitchell, Arnan; Austin, Michael W.; Kivshar, Yuri S.

    2007-09-01

    We present the first observation of spatiospectral control and localization of supercontinuum light through the nonlinear interaction of spectral components in extended periodic structures. We use an array of optical waveguides in a LiNbO3 crystal and employ the interplay between diffraction and nonlinearity to dynamically control the output spectrum of the supercontinuum radiation. This effect presents an efficient scheme for optically tunable spectral filtering of supercontinua.

  17. Aggregated TiO2 Based Nanotubes for Dye Sensitized Solar Cells

    SciTech Connect

    Nie, Zimin; Zhou, Xiaoyuan; Zhang, Qifeng; Cao, Guozhong; Liu, Jun

    2013-11-01

    One-dimensional (1D) semiconducting oxides have attracted great attention for dye sensitized solar cells (DSCs), but the overall performance is still quite limited as compared to TiO2 nanocrystalline DSCs. Here, we report the synthesis of aggregated TiO2 based nanotubes with controlled morphologies and crystalline structures to obtain an overall power conversion efficiency of 9.9% using conventional dye without any additional chemical treatment steps. The high efficiency is attributed to the unique aggregate structure for light harvesting, optimized high surface area, and good crystallinity of the nanotube aggregates obtained through proper thermal annealing. This study demonstrates that high efficiency DSCs can be obtained with 1D nanomaterials, and provides lessons on the importance of optimizing both the nanocrystalline structure and the overall microscale morphology.

  18. Spectral Band Characterization for Hyperspectral Monitoring of Water Quality

    NASA Technical Reports Server (NTRS)

    Vermillion, Stephanie C.; Raqueno, Rolando; Simmons, Rulon

    2001-01-01

    A method for selecting the set of spectral characteristics that provides the smallest increase in prediction error is of interest to those using hyperspectral imaging (HSI) to monitor water quality. The spectral characteristics of interest to these applications are spectral bandwidth and location. Three water quality constituents of interest that are detectable via remote sensing are chlorophyll (CHL), total suspended solids (TSS), and colored dissolved organic matter (CDOM). Hyperspectral data provides a rich source of information regarding the content and composition of these materials, but often provides more data than an analyst can manage. This study addresses the spectral characteristics need for water quality monitoring for two reasons. First, determination of the greatest contribution of these spectral characteristics would greatly improve computational ease and efficiency. Second, understanding the spectral capabilities of different spectral resolutions and specific regions is an essential part of future system development and characterization. As new systems are developed and tested, water quality managers will be asked to determine sensor specifications that provide the most accurate and efficient water quality measurements. We address these issues using data from the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) and a set of models to predict constituent concentrations.

  19. Spectral beam combining of multi-single emitters

    NASA Astrophysics Data System (ADS)

    Wang, Baohua; Guo, Weirong; Guo, Zhijie; Xu, Dan; Zhu, Jing; Zhang, Qiang; Yang, Thomas; Chen, Xiaohua

    2016-03-01

    Spectral beam combination expands the output power while keeps the beam quality of the combined beam almost the same as that of a single emitter. Spectral beam combination has been successfully achieved for high power fiber lasers, diode laser arrays and diode laser stacks. We have recently achieved the spectral beam combination of multiple single emitter diode lasers. Spatial beam combination and beam transformation are employed before beams from 25 single emitter diode lasers can be spectrally combined. An average output power about 220W, a spectral bandwidth less than 9 nm (95% energy), a beam quality similar to that of a single emitter and electro-optical conversion efficiency over 46% are achieved. In this paper, Rigorous Coupled Wave analysis is used to numerically evaluate the influence of emitter width, emitter pitch and focal length of transform lens on diffraction efficiency of the grating and spectral bandwidth. To assess the chance of catastrophic optical mirror damage (COMD), the optical power in the internal cavity of a free running emitter and the optical power in the grating external cavity of a wavelength locked emitter are theoretically analyzed. Advantages and disadvantages of spectral beam combination are concluded.

  20. Multi Spectral Imaging System

    NASA Technical Reports Server (NTRS)

    Spiering, Bruce A. (Inventor)

    1999-01-01

    An optical imaging system provides automatic co-registration of a plurality of multi spectral images of an object which are generated by a plurality of video cameras or other optical detectors. The imaging system includes a modular assembly of beam splitters, lens tubes, camera lenses and wavelength selective filters which facilitate easy reconfiguration and adjustment of the system for various applications. A primary lens assembly generates a real image of an object to be imaged on a reticle which is positioned at a fixed length from a beam splitter assembly. The beam splitter assembly separates a collimated image beam received from the reticle into multiple image beams, each of which is projected onto a corresponding one of a plurality of video cameras. The lens tubes which connect the beam splitter assembly to the cameras are adjustable in length to provide automatic co-registration of the images generated by each camera.

  1. Spectral Domain Phase Microscopy

    NASA Astrophysics Data System (ADS)

    Hendargo, Hansford C.; Ellerbee, Audrey K.; Izatt, Joseph A.

    Spectral domain phase microscopy (SDPM) is a functional extension of optical coherence tomography (OCT) using common-path interferometry to produce phase-referenced images of dynamic samples. Like OCT, axial resolution in SDPM is determined by the source coherence length, while lateral resolution is limited by diffraction in the microscope optics. However, the quantitative phase information SDPM generates is sensitive to nanometer-scale displacements of scattering structures. The use of a common-path optical geometry yields an imaging system with high phase stability. Due to coherence gating, SDPM can achieve full depth discrimination, allowing for independent motion resolution of subcellular structures throughout the sample volume. Here we review the basic theory of OCT and SDPM along with applications of SDPM in cellular imaging to measure topology, Doppler flow in single-celled organisms, time-resolved motions, rheological information of the cytoskeleton, and optical signaling of neural activation. Phase imaging limitations, artifacts, and sensitivity considerations are discussed.

  2. Broadband ringdown spectral photography.

    PubMed

    Scherer, J J; Paul, J B; Jiao, H; O'Keefe, A

    2001-12-20

    A new technique that enables frequency-resolved cavity ringdown absorption spectra to be obtained over a large optical bandwidth by a single laser shot is described. The technique, ringdown spectral photography (RSP), simultaneously employs two key principles to record the time and frequency response of an optical cavity along orthogonal axes of a CCD array detector. Previously, the principles employed in RSP were demonstrated with narrow-band laser light that was scanned in frequency [Chem. Phys. Lett. 292, 143 (1998)]. Here, the RSP method is demonstrated using single pulses of broadband visible laser light. The ability to obtain broad as well as rotationally resolved spectra over a large bandwidth with high sensitivity is demonstrated. PMID:18364983

  3. Miniature spectrally selective dosimeter

    NASA Technical Reports Server (NTRS)

    Adams, R. R.; Macconochie, I. O.; Poole, B. D., Jr. (Inventor)

    1980-01-01

    A miniature spectrally selective dosimeter capable of measuring selected bandwidths of radiation exposure on small mobile areas is described. This is achieved by the combination of photovoltaic detectors, electrochemical integrators (E-cells) and filters in a small compact case which can be easily attached in close proximity to and substantially parallel to the surface being measured. In one embodiment two photovoltaic detectors, two E-cells, and three filters are packaged in a small case with attaching means consisting of a safety pin. In another embodiment, two detectors, one E-cell, three filters are packaged in a small case with attaching means consisting of a clip to clip over a side piece of an eye glass frame.

  4. Spectral tripartitioning of networks

    NASA Astrophysics Data System (ADS)

    Richardson, Thomas; Mucha, Peter J.; Porter, Mason A.

    2009-09-01

    We formulate a spectral graph-partitioning algorithm that uses the two leading eigenvectors of the matrix corresponding to a selected quality function to split a network into three communities in a single step. In so doing, we extend the recursive bipartitioning methods developed by Newman [M. E. J. Newman, Proc. Natl. Acad. Sci. U.S.A. 103, 8577 (2006); Phys. Rev. E 74, 036104 (2006)] to allow one to consider the best available two-way and three-way divisions at each recursive step. We illustrate the method using simple “bucket brigade” examples and then apply the algorithm to examine the community structures of the coauthorship graph of network scientists and of U. S. Congressional networks inferred from roll call voting similarities.

  5. Rapid Aggregation of Biofuel-Producing Algae by the Bacterium Bacillus sp. Strain RP1137

    PubMed Central

    Powell, Ryan J.

    2013-01-01

    Algal biofuels represent one of the most promising means of sustainably replacing liquid fuels. However, significant challenges remain before alga-based fuels become competitive with fossil fuels. One of the largest challenges is the ability to harvest the algae in an economical and low-energy manner. In this article, we describe the isolation of a bacterial strain, Bacillus sp. strain RP1137, which can rapidly aggregate several algae that are candidates for biofuel production, including a Nannochloropsis sp. This bacterium aggregates algae in a pH-dependent and reversible manner and retains its aggregation ability after paraformaldehyde fixation, opening the possibility for reuse of the cells. The optimal ratio of bacteria to algae is described, as is the robustness of aggregation at different salinities and temperatures. Aggregation is dependent on the presence of calcium or magnesium ions. The efficiency of aggregation of Nannochloropsis oceanica IMET1 is between 70 and 95% and is comparable to that obtained by other means of harvest; however, the rate of harvest is fast, with aggregates forming in 30 s. PMID:23892750

  6. Generation and Exploitation of Aggregation Abstractions for Scheduling and Resource Allocation

    NASA Technical Reports Server (NTRS)

    Linden, Theodore A.; Lowry, Michael R.

    1992-01-01

    Our research is investigating abstraction of computational theories for scheduling and resource allocation. These theories are represented in a variant of first order predicate calculus, parameterized multisorted logic, that facilitates specification of large problems. A particular problem is conceptually stated as a set of ground sentences that are consistent with a quantified theory. We are mainly investigating the automated generation of aggregation abstractions and approximations in which detailed resource allocation constraints are replaced by constraints between aggregate demand and capacity. We are also investigating the interaction of aggregation abstractions with the more thoroughly investigated abstractions of weakening operator preconditions. The purpose of the theories for aggregated demand/capacity is threefold: first, to answer queries about aggregate properties, such as gross feasibility; second, to reduce computational costs by using the solution of aggregate problems to guide the solution of detailed problems; and third, to facilitate reformulating theories to approximate problems for which there are efficient problem solving methods. We also describe novel methods for exploiting aggregation abstractions.

  7. Rapid aggregation of biofuel-producing algae by the bacterium Bacillus sp. strain RP1137.

    PubMed

    Powell, Ryan J; Hill, Russell T

    2013-10-01

    Algal biofuels represent one of the most promising means of sustainably replacing liquid fuels. However, significant challenges remain before alga-based fuels become competitive with fossil fuels. One of the largest challenges is the ability to harvest the algae in an economical and low-energy manner. In this article, we describe the isolation of a bacterial strain, Bacillus sp. strain RP1137, which can rapidly aggregate several algae that are candidates for biofuel production, including a Nannochloropsis sp. This bacterium aggregates algae in a pH-dependent and reversible manner and retains its aggregation ability after paraformaldehyde fixation, opening the possibility for reuse of the cells. The optimal ratio of bacteria to algae is described, as is the robustness of aggregation at different salinities and temperatures. Aggregation is dependent on the presence of calcium or magnesium ions. The efficiency of aggregation of Nannochloropsis oceanica IMET1 is between 70 and 95% and is comparable to that obtained by other means of harvest; however, the rate of harvest is fast, with aggregates forming in 30 s.

  8. Can intra-aggregate pore structures affect the aggregate's effectiveness in protecting carbon?

    SciTech Connect

    Ananyeva, K; Wang, W; Smucker, A J.M.; Rivers, M L; Kravchenko, A N

    2012-11-15

    Aggregates are known to provide physical protection to soil organic matter shielding it from rapid decomposition. Spatial arrangement and size distribution of intra-aggregate pores play an important role in this process. This study examined relationships between intra-aggregate pores measured using X-ray computed micro-tomography images and concentrations of total C in 4–6 mm macro-aggregates from two contrasting land use and management practices, namely, conventionally tilled and managed row crop agricultural system (CT) and native succession vegetation converted from tilled agricultural land in 1989 (NS). Previous analyses of these aggregates indicated that small (<15 μm) and large (>100 μm) pores prevail in NS aggregates while medium (30–90 μm) pores are more abundant in CT aggregates (Kravchenko et al., 2011; Wang et al., 2012). We hypothesized that these differences in pore size distributions affect the ability of macro-aggregates to protect C. The results of this study supported this hypothesis. Consistent with greater heterogeneity of pore distributions within NS aggregates we observed higher total C and greater intra-aggregate C variability in NS as compared with CT aggregates. Total C concentrations and intra-aggregate C standard deviations were negatively correlated with fractions of medium sized pores, indicating that presence of such pores was associated with lower but more homogeneously distributed total C. While total C was positively correlated with presence of small and large pores. The results suggest that because of their pore structure NS macro-aggregates provide more effective physical protection to C than CT aggregates.

  9. ATR neutron spectral characterization

    SciTech Connect

    Rogers, J.W.; Anderl, R.A.

    1995-11-01

    The Advanced Test Reactor (ATR) at INEL provides intense neutron fields for irradiation-effects testing of reactor material samples, for production of radionuclides used in industrial and medical applications, and for scientific research. Characterization of the neutron environments in the irradiation locations of the ATR has been done by means of neutronics calculations and by means of neutron dosimetry based on the use of neutron activation monitors that are placed in the various irradiation locations. The primary purpose of this report is to present the results of an extensive characterization of several ATR irradiation locations based on neutron dosimetry measurements and on least-squares-adjustment analyses that utilize both neutron dosimetry measurements and neutronics calculations. This report builds upon the previous publications, especially the reference 4 paper. Section 2 provides a brief description of the ATR and it tabulates neutron spectral information for typical irradiation locations, as derived from the more historical neutron dosimetry measurements. Relevant details that pertain to the multigroup neutron spectral characterization are covered in section 3. This discussion includes a presentation on the dosimeter irradiation and analyses and a development of the least-squares adjustment methodology, along with a summary of the results of these analyses. Spectrum-averaged cross sections for neutron monitoring and for displacement-damage prediction in Fe, Cr, and Ni are given in section 4. In addition, section4 includes estimates of damage generation rates for these materials in selected ATR irradiation locations. In section 5, the authors present a brief discussion of the most significant conclusions of this work and comment on its relevance to the present ATR core configuration. Finally, detailed numerical and graphical results for the spectrum-characterization analyses in each irradiation location are provided in the Appendix.

  10. Spectral Interferometry with Electron Microscopes.

    PubMed

    Talebi, Nahid

    2016-01-01

    Interference patterns are not only a defining characteristic of waves, but also have several applications; characterization of coherent processes and holography. Spatial holography with electron waves, has paved the way towards space-resolved characterization of magnetic domains and electrostatic potentials with angstrom spatial resolution. Another impetus in electron microscopy has been introduced by ultrafast electron microscopy which uses pulses of sub-picosecond durations for probing a laser induced excitation of the sample. However, attosecond temporal resolution has not yet been reported, merely due to the statistical distribution of arrival times of electrons at the sample, with respect to the laser time reference. This is however, the very time resolution which will be needed for performing time-frequency analysis. These difficulties are addressed here by proposing a new methodology to improve the synchronization between electron and optical excitations through introducing an efficient electron-driven photon source. We use focused transition radiation of the electron as a pump for the sample. Due to the nature of transition radiation, the process is coherent. This technique allows us to perform spectral interferometry with electron microscopes, with applications in retrieving the phase of electron-induced polarizations and reconstructing dynamics of the induced vector potential. PMID:27649932

  11. Method of photon spectral analysis

    DOEpatents

    Gehrke, Robert J.; Putnam, Marie H.; Killian, E. Wayne; Helmer, Richard G.; Kynaston, Ronnie L.; Goodwin, Scott G.; Johnson, Larry O.

    1993-01-01

    A spectroscopic method to rapidly measure the presence of plutonium in soils, filters, smears, and glass waste forms by measuring the uranium L-shell x-ray emissions associated with the decay of plutonium. In addition, the technique can simultaneously acquire spectra of samples and automatically analyze them for the amount of americium and .gamma.-ray emitting activation and fission products present. The samples are counted with a large area, thin-window, n-type germanium spectrometer which is equally efficient for the detection of low-energy x-rays (10-2000 keV), as well as high-energy .gamma. rays (>1 MeV). A 8192- or 16,384 channel analyzer is used to acquire the entire photon spectrum at one time. A dual-energy, time-tagged pulser, that is injected into the test input of the preamplifier to monitor the energy scale, and detector resolution. The L x-ray portion of each spectrum is analyzed by a linear-least-squares spectral fitting technique. The .gamma.-ray portion of each spectrum is analyzed by a standard Ge .gamma.-ray analysis program. This method can be applied to any analysis involving x- and .gamma.-ray analysis in one spectrum and is especially useful when interferences in the x-ray region can be identified from the .gamma.-ray analysis and accommodated during the x-ray analysis.

  12. Method of photon spectral analysis

    DOEpatents

    Gehrke, R.J.; Putnam, M.H.; Killian, E.W.; Helmer, R.G.; Kynaston, R.L.; Goodwin, S.G.; Johnson, L.O.

    1993-04-27

    A spectroscopic method to rapidly measure the presence of plutonium in soils, filters, smears, and glass waste forms by measuring the uranium L-shell x-ray emissions associated with the decay of plutonium. In addition, the technique can simultaneously acquire spectra of samples and automatically analyze them for the amount of americium and [gamma]-ray emitting activation and fission products present. The samples are counted with a large area, thin-window, n-type germanium spectrometer which is equally efficient for the detection of low-energy x-rays (10-2,000 keV), as well as high-energy [gamma] rays (>1 MeV). A 8,192- or 16,384 channel analyzer is used to acquire the entire photon spectrum at one time. A dual-energy, time-tagged pulser, that is injected into the test input of the preamplifier to monitor the energy scale, and detector resolution. The L x-ray portion of each spectrum is analyzed by a linear-least-squares spectral fitting technique. The [gamma]-ray portion of each spectrum is analyzed by a standard Ge [gamma]-ray analysis program. This method can be applied to any analysis involving x- and [gamma]-ray analysis in one spectrum and is especially useful when interferences in the x-ray region can be identified from the [gamma]-ray analysis and accommodated during the x-ray analysis.

  13. Spectral Interferometry with Electron Microscopes

    PubMed Central

    Talebi, Nahid

    2016-01-01

    Interference patterns are not only a defining characteristic of waves, but also have several applications; characterization of coherent processes and holography. Spatial holography with electron waves, has paved the way towards space-resolved characterization of magnetic domains and electrostatic potentials with angstrom spatial resolution. Another impetus in electron microscopy has been introduced by ultrafast electron microscopy which uses pulses of sub-picosecond durations for probing a laser induced excitation of the sample. However, attosecond temporal resolution has not yet been reported, merely due to the statistical distribution of arrival times of electrons at the sample, with respect to the laser time reference. This is however, the very time resolution which will be needed for performing time-frequency analysis. These difficulties are addressed here by proposing a new methodology to improve the synchronization between electron and optical excitations through introducing an efficient electron-driven photon source. We use focused transition radiation of the electron as a pump for the sample. Due to the nature of transition radiation, the process is coherent. This technique allows us to perform spectral interferometry with electron microscopes, with applications in retrieving the phase of electron-induced polarizations and reconstructing dynamics of the induced vector potential. PMID:27649932

  14. Spectral Interferometry with Electron Microscopes.

    PubMed

    Talebi, Nahid

    2016-01-01

    Interference patterns are not only a defining characteristic of waves, but also have several applications; characterization of coherent processes and holography. Spatial holography with electron waves, has paved the way towards space-resolved characterization of magnetic domains and electrostatic potentials with angstrom spatial resolution. Another impetus in electron microscopy has been introduced by ultrafast electron microscopy which uses pulses of sub-picosecond durations for probing a laser induced excitation of the sample. However, attosecond temporal resolution has not yet been reported, merely due to the statistical distribution of arrival times of electrons at the sample, with respect to the laser time reference. This is however, the very time resolution which will be needed for performing time-frequency analysis. These difficulties are addressed here by proposing a new methodology to improve the synchronization between electron and optical excitations through introducing an efficient electron-driven photon source. We use focused transition radiation of the electron as a pump for the sample. Due to the nature of transition radiation, the process is coherent. This technique allows us to perform spectral interferometry with electron microscopes, with applications in retrieving the phase of electron-induced polarizations and reconstructing dynamics of the induced vector potential.

  15. Spectral Automorphisms in Quantum Logics

    NASA Astrophysics Data System (ADS)

    Ivanov, Alexandru; Caragheorgheopol, Dan

    2010-12-01

    In quantum mechanics, the Hilbert space formalism might be physically justified in terms of some axioms based on the orthomodular lattice (OML) mathematical structure (Piron in Foundations of Quantum Physics, Benjamin, Reading, 1976). We intend to investigate the extent to which some fundamental physical facts can be described in the more general framework of OMLs, without the support of Hilbert space-specific tools. We consider the study of lattice automorphisms properties as a “substitute” for Hilbert space techniques in investigating the spectral properties of observables. This is why we introduce the notion of spectral automorphism of an OML. Properties of spectral automorphisms and of their spectra are studied. We prove that the presence of nontrivial spectral automorphisms allow us to distinguish between classical and nonclassical theories. We also prove, for finite dimensional OMLs, that for every spectral automorphism there is a basis of invariant atoms. This is an analogue of the spectral theorem for unitary operators having purely point spectrum.

  16. Method of multivariate spectral analysis

    DOEpatents

    Keenan, Michael R.; Kotula, Paul G.

    2004-01-06

    A method of determining the properties of a sample from measured spectral data collected from the sample by performing a multivariate spectral analysis. The method can include: generating a two-dimensional matrix A containing measured spectral data; providing a weighted spectral data matrix D by performing a weighting operation on matrix A; factoring D into the product of two matrices, C and S.sup.T, by performing a constrained alternating least-squares analysis of D=CS.sup.T, where C is a concentration intensity matrix and S is a spectral shapes matrix; unweighting C and S by applying the inverse of the weighting used previously; and determining the properties of the sample by inspecting C and S. This method can be used to analyze X-ray spectral data generated by operating a Scanning Electron Microscope (SEM) with an attached Energy Dispersive Spectrometer (EDS).

  17. Interference between Coulombic and CT-mediated couplings in molecular aggregates: H- to J-aggregate transformation in perylene-based π-stacks

    SciTech Connect

    Hestand, Nicholas J.; Spano, Frank C.

    2015-12-28

    The spectroscopic differences between J and H-aggregates are traditionally attributed to the spatial dependence of the Coulombic coupling, as originally proposed by Kasha. However, in tightly packed molecular aggregates wave functions on neighboring molecules overlap, leading to an additional charge transfer (CT) mediated exciton coupling with a vastly different spatial dependence. The latter is governed by the nodal patterns of the molecular LUMOs and HOMOs from which the electron (t{sub e}) and hole (t{sub h}) transfer integrals derive. The sign of the CT-mediated coupling depends on the sign of the product t{sub e}t{sub h} and is therefore highly sensitive to small (sub-Angstrom) transverse displacements or slips. Given that Coulombic and CT-mediated couplings exist simultaneously in tightly packed molecular systems, the interference between the two must be considered when defining J and H-aggregates. Generally, such π-stacked aggregates do not abide by the traditional classification scheme of Kasha: for example, even when the Coulomb coupling is strong the presence of a similarly strong but destructively interfering CT-mediated coupling results in “null-aggregates” which spectroscopically resemble uncoupled molecules. Based on a Frenkel/CT Holstein Hamiltonian that takes into account both sources of electronic coupling as well as intramolecular vibrations, vibronic spectral signatures are developed for integrated Frenkel/CT systems in both the perturbative and resonance regimes. In the perturbative regime, the sign of the lowest exciton band curvature, which rigorously defines J and H-aggregation, is directly tracked by the ratio of the first two vibronic peak intensities. Even in the resonance regime, the vibronic ratio remains a useful tool to evaluate the J or H nature of the system. The theory developed is applied to the reversible H to J-aggregate transformations recently observed in several perylene bisimide systems.

  18. A Game Theory Algorithm for Intra-Cluster Data Aggregation in a Vehicular Ad Hoc Network.

    PubMed

    Chen, Yuzhong; Weng, Shining; Guo, Wenzhong; Xiong, Naixue

    2016-01-01

    Vehicular ad hoc networks (VANETs) have an important role in urban management and planning. The effective integration of vehicle information in VANETs is critical to traffic analysis, large-scale vehicle route planning and intelligent transportation scheduling. However, given the limitations in the precision of the output information of a single sensor and the difficulty of information sharing among various sensors in a highly dynamic VANET, effectively performing data aggregation in VANETs remains a challenge. Moreover, current studies have mainly focused on data aggregation in large-scale environments but have rarely discussed the issue of intra-cluster data aggregation in VANETs. In this study, we propose a multi-player game theory algorithm for intra-cluster data aggregation in VANETs by analyzing the competitive and cooperative relationships among sensor nodes. Several sensor-centric metrics are proposed to measure the data redundancy and stability of a cluster. We then study the utility function to achieve efficient intra-cluster data aggregation by considering both data redundancy and cluster stability. In particular, we prove the existence of a unique Nash equilibrium in the game model, and conduct extensive experiments to validate the proposed algorithm. Results demonstrate that the proposed algorithm has advantages over typical data aggregation algorithms in both accuracy and efficiency. PMID:26907272

  19. A Game Theory Algorithm for Intra-Cluster Data Aggregation in a Vehicular Ad Hoc Network.

    PubMed

    Chen, Yuzhong; Weng, Shining; Guo, Wenzhong; Xiong, Naixue

    2016-02-19

    Vehicular ad hoc networks (VANETs) have an important role in urban management and planning. The effective integration of vehicle information in VANETs is critical to traffic analysis, large-scale vehicle route planning and intelligent transportation scheduling. However, given the limitations in the precision of the output information of a single sensor and the difficulty of information sharing among various sensors in a highly dynamic VANET, effectively performing data aggregation in VANETs remains a challenge. Moreover, current studies have mainly focused on data aggregation in large-scale environments but have rarely discussed the issue of intra-cluster data aggregation in VANETs. In this study, we propose a multi-player game theory algorithm for intra-cluster data aggregation in VANETs by analyzing the competitive and cooperative relationships among sensor nodes. Several sensor-centric metrics are proposed to measure the data redundancy and stability of a cluster. We then study the utility function to achieve efficient intra-cluster data aggregation by considering both data redundancy and cluster stability. In particular, we prove the existence of a unique Nash equilibrium in the game model, and conduct extensive experiments to validate the proposed algorithm. Results demonstrate that the proposed algorithm has advantages over typical data aggregation algorithms in both accuracy and efficiency.

  20. A Game Theory Algorithm for Intra-Cluster Data Aggregation in a Vehicular Ad Hoc Network

    PubMed Central

    Chen, Yuzhong; Weng, Shining; Guo, Wenzhong; Xiong, Naixue

    2016-01-01

    Vehicular ad hoc networks (VANETs) have an important role in urban management and planning. The effective integration of vehicle information in VANETs is critical to traffic analysis, large-scale vehicle route planning and intelligent transportation scheduling. However, given the limitations in the precision of the output information of a single sensor and the difficulty of information sharing among various sensors in a highly dynamic VANET, effectively performing data aggregation in VANETs remains a challenge. Moreover, current studies have mainly focused on data aggregation in large-scale environments but have rarely discussed the issue of intra-cluster data aggregation in VANETs. In this study, we propose a multi-player game theory algorithm for intra-cluster data aggregation in VANETs by analyzing the competitive and cooperative relationships among sensor nodes. Several sensor-centric metrics are proposed to measure the data redundancy and stability of a cluster. We then study the utility function to achieve efficient intra-cluster data aggregation by considering both data redundancy and cluster stability. In particular, we prove the existence of a unique Nash equilibrium in the game model, and conduct extensive experiments to validate the proposed algorithm. Results demonstrate that the proposed algorithm has advantages over typical data aggregation algorithms in both accuracy and efficiency. PMID:26907272