Sample records for alap
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Adaptive Laplacian filtering for sensorimotor rhythm-based brain-computer interfaces.
Lu, Jun; McFarland, Dennis J; Wolpaw, Jonathan R
2013-02-01
Sensorimotor rhythms (SMRs) are 8-30 Hz oscillations in the electroencephalogram (EEG) recorded from the scalp over sensorimotor cortex that change with movement and/or movement imagery. Many brain-computer interface (BCI) studies have shown that people can learn to control SMR amplitudes and can use that control to move cursors and other objects in one, two or three dimensions. At the same time, if SMR-based BCIs are to be useful for people with neuromuscular disabilities, their accuracy and reliability must be improved substantially. These BCIs often use spatial filtering methods such as common average reference (CAR), Laplacian (LAP) filter or common spatial pattern (CSP) filter to enhance the signal-to-noise ratio of EEG. Here, we test the hypothesis that a new filter design, called an 'adaptive Laplacian (ALAP) filter', can provide better performance for SMR-based BCIs. An ALAP filter employs a Gaussian kernel to construct a smooth spatial gradient of channel weights and then simultaneously seeks the optimal kernel radius of this spatial filter and the regularization parameter of linear ridge regression. This optimization is based on minimizing the leave-one-out cross-validation error through a gradient descent method and is computationally feasible. Using a variety of kinds of BCI data from a total of 22 individuals, we compare the performances of ALAP filter to CAR, small LAP, large LAP and CSP filters. With a large number of channels and limited data, ALAP performs significantly better than CSP, CAR, small LAP and large LAP both in classification accuracy and in mean-squared error. Using fewer channels restricted to motor areas, ALAP is still superior to CAR, small LAP and large LAP, but equally matched to CSP. Thus, ALAP may help to improve the accuracy and robustness of SMR-based BCIs.
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Adaptive Laplacian filtering for sensorimotor rhythm-based brain-computer interfaces
NASA Astrophysics Data System (ADS)
Lu, Jun; McFarland, Dennis J.; Wolpaw, Jonathan R.
2013-02-01
Objective. Sensorimotor rhythms (SMRs) are 8-30 Hz oscillations in the electroencephalogram (EEG) recorded from the scalp over sensorimotor cortex that change with movement and/or movement imagery. Many brain-computer interface (BCI) studies have shown that people can learn to control SMR amplitudes and can use that control to move cursors and other objects in one, two or three dimensions. At the same time, if SMR-based BCIs are to be useful for people with neuromuscular disabilities, their accuracy and reliability must be improved substantially. These BCIs often use spatial filtering methods such as common average reference (CAR), Laplacian (LAP) filter or common spatial pattern (CSP) filter to enhance the signal-to-noise ratio of EEG. Here, we test the hypothesis that a new filter design, called an ‘adaptive Laplacian (ALAP) filter’, can provide better performance for SMR-based BCIs. Approach. An ALAP filter employs a Gaussian kernel to construct a smooth spatial gradient of channel weights and then simultaneously seeks the optimal kernel radius of this spatial filter and the regularization parameter of linear ridge regression. This optimization is based on minimizing the leave-one-out cross-validation error through a gradient descent method and is computationally feasible. Main results. Using a variety of kinds of BCI data from a total of 22 individuals, we compare the performances of ALAP filter to CAR, small LAP, large LAP and CSP filters. With a large number of channels and limited data, ALAP performs significantly better than CSP, CAR, small LAP and large LAP both in classification accuracy and in mean-squared error. Using fewer channels restricted to motor areas, ALAP is still superior to CAR, small LAP and large LAP, but equally matched to CSP. Significance. Thus, ALAP may help to improve the accuracy and robustness of SMR-based BCIs.
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A unique H2A histone variant occupies the transcriptional start site of active genes.
Soboleva, Tatiana A; Nekrasov, Maxim; Pahwa, Anuj; Williams, Rohan; Huttley, Gavin A; Tremethick, David J
2011-12-04
Transcriptional activation is controlled by chromatin, which needs to be unfolded and remodeled to ensure access to the transcription start site (TSS). However, the mechanisms that yield such an 'open' chromatin structure, and how these processes are coordinately regulated during differentiation, are poorly understood. We identify the mouse (Mus musculus) H2A histone variant H2A.Lap1 as a previously undescribed component of the TSS of active genes expressed during specific stages of spermatogenesis. This unique chromatin landscape also includes a second histone variant, H2A.Z. In the later stages of round spermatid development, H2A.Lap1 dynamically loads onto the inactive X chromosome, enabling the transcriptional activation of previously repressed genes. Mechanistically, we show that H2A.Lap1 imparts unique unfolding properties to chromatin. We therefore propose that H2A.Lap1 coordinately regulates gene expression by directly opening the chromatin structure of the TSS at genes regulated during spermatogenesis.
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Pulse and Entrainment to Non-Isochronous Auditory Stimuli: The Case of North Indian Alap
Will, Udo; Clayton, Martin; Wertheim, Ira; Leante, Laura; Berg, Eric
2015-01-01
Pulse is often understood as a feature of a (quasi-) isochronous event sequence that is picked up by an entrained subject. However, entrainment does not only occur between quasi-periodic rhythms. This paper demonstrates the expression of pulse by subjects listening to non-periodic musical stimuli and investigates the processes behind this behaviour. The stimuli are extracts from the introductory sections of North Indian (Hindustani) classical music performances (alap, jor and jhala). The first of three experiments demonstrates regular motor responses to both irregular alap and more regular jor sections: responses to alap appear related to individual spontaneous tempi, while for jor they relate to the stimulus event rate. A second experiment investigated whether subjects respond to average periodicities of the alap section, and whether their responses show phase alignment to the musical events. In the third experiment we investigated responses to a broader sample of performances, testing their relationship to spontaneous tempo, and the effect of prior experience with this music. Our results suggest an entrainment model in which pulse is understood as the experience of one’s internal periodicity: it is not necessarily linked to temporally regular, structured sensory input streams; it can arise spontaneously through the performance of repetitive motor actions, or on exposure to event sequences with rather irregular temporal structures. Greater regularity in the external event sequence leads to entrainment between motor responses and stimulus sequence, modifying subjects’ internal periodicities in such a way that they are either identical or harmonically related to each other. This can be considered as the basis for shared (rhythmic) experience and may be an important process supporting ‘social’ effects of temporally regular music. PMID:25849357
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Pulse and entrainment to non-isochronous auditory stimuli: the case of north Indian alap.
Will, Udo; Clayton, Martin; Wertheim, Ira; Leante, Laura; Berg, Eric
2015-01-01
Pulse is often understood as a feature of a (quasi-) isochronous event sequence that is picked up by an entrained subject. However, entrainment does not only occur between quasi-periodic rhythms. This paper demonstrates the expression of pulse by subjects listening to non-periodic musical stimuli and investigates the processes behind this behaviour. The stimuli are extracts from the introductory sections of North Indian (Hindustani) classical music performances (alap, jor and jhala). The first of three experiments demonstrates regular motor responses to both irregular alap and more regular jor sections: responses to alap appear related to individual spontaneous tempi, while for jor they relate to the stimulus event rate. A second experiment investigated whether subjects respond to average periodicities of the alap section, and whether their responses show phase alignment to the musical events. In the third experiment we investigated responses to a broader sample of performances, testing their relationship to spontaneous tempo, and the effect of prior experience with this music. Our results suggest an entrainment model in which pulse is understood as the experience of one's internal periodicity: it is not necessarily linked to temporally regular, structured sensory input streams; it can arise spontaneously through the performance of repetitive motor actions, or on exposure to event sequences with rather irregular temporal structures. Greater regularity in the external event sequence leads to entrainment between motor responses and stimulus sequence, modifying subjects' internal periodicities in such a way that they are either identical or harmonically related to each other. This can be considered as the basis for shared (rhythmic) experience and may be an important process supporting 'social' effects of temporally regular music.
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76 FR 6313 - Asparagus Revenue Market Loss Assistance Payment Program
Federal Register 2010, 2011, 2012, 2013, 2014
2011-02-04
... Revenue Market Loss Assistance Payment Program AGENCY: Commodity Credit Corporation and Farm Service Agency, USDA. ACTION: Final rule. SUMMARY: This rule implements the Asparagus Revenue Market Loss Assistance Payment (ALAP) Program authorized by the Food, Conservation and Energy Act of 2008 (the 2008 Farm...
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75 FR 41397 - Asparagus Revenue Market Loss Assistance Payment Program
Federal Register 2010, 2011, 2012, 2013, 2014
2010-07-16
... Revenue Market Loss Assistance Payment Program AGENCY: Commodity Credit Corporation and Farm Service... to implement the new Asparagus Revenue Market Loss Assistance Payment (ALAP) Program authorized by the Food, Conservation, and Energy Act of 2008 (the 2008 Farm Bill). The purpose of the program is to...
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NASA Astrophysics Data System (ADS)
Shevchenko, A. A.; Dolgoborodov, A. Yu; Kirilenko, V. G.; Brazhnikov, M. A.
2016-11-01
Deflagration-to-detonation transition (DDT) in aluminum-ammonium perchlorate (Al/AP) loose-packed charges (80% porosity) has been studied. The charges were manufactured from preliminary mechanoactivated mixtures. The mixtures placed in steel tubes 10 mm in diameter were ignited by Nichrome wire. It was found that it is possible to distinguish three parts corresponding to different stages of DDT process development. Steady-state detonation velocity reached the level of 2500 m/s at the distance of 90 mm from the ignition point.
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NASA Astrophysics Data System (ADS)
Huang, Lidong; Zhang, Yaohong; Shi, Yiming; Liu, Yibo; Wang, Lin; Yan, Ning
2015-05-01
Phosphorus (P) fractions and phosphatase activities were measured in 22 coastal wetland soils with typical vegetation successions in Yancheng National Nature Reserve, China. P forms and phosphatase activities varied greatly from site to site even under the same vegetation cover. NH4Cl-P, bicarbonate/dithionite extracted P and NaOH-P were remarkably higher (p < 0.05) in soils with exotic invasive plants, Spartina alterniflora, than in soils with the native species Suaeda salsa, Scirpus mariquete and Phragmites australis. HCl-P and refractory P showed little variation. No significant differences were detected for either alkaline phosphatase (ALAP) or acid phosphatase (ACAP) among the soils. All of the above properties were much higher in soils with plant growth compared to bare flat soils. Regression analysis demonstrated that organic matter (OM), Al, Ca, Fe and total P (TP) were able to explain more than 70% of the variations in the P fractions (except 29% of NH4Cl-P), and OM was the most important contributing factor. ALAP and ACAP were irrelevant to P but were significantly related to TOC, suggesting that carbon was a limiting factor for P mineralization in this area. Owing to its huge biomass and densities, Spartina alterniflora displayed great potential for carbon input, thus facilitating P mineralization and cycling. The results enhance our understanding of P availability differences in this area covered by invasive and native vegetation.
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Laughton, Deborah S; Sheppard, Amy L; Davies, Leon N
To investigate non-cycloplegic changes in refractive error prior to the onset of presbyopia. The Aston Longitudinal Assessment of Presbyopia (ALAP) study is a prospective 2.5 year longitudinal study, measuring objective refractive error using a binocular open-field WAM-5500 autorefractor at 6-month intervals in participants aged between 33 and 45 years. From the 58 participants recruited, 51 participants (88%) completed the final visit. At baseline, 21 participants were myopic (MSE -3.25±2.28 DS; baseline age 38.6±3.1 years) and 30 were emmetropic (MSE -0.17±0.32 DS; baseline age 39.0±2.9 years). After 2.5 years, 10% of the myopic group experienced a hypermetropic shift (≥0.50 D), 5% a myopic shift (≥0.50 D) and 85% had no significant change in refraction (<0.50 D). From the emmetropic group, 10% experienced a hypermetropic shift (≥0.50 D), 3% a myopic shift (≥0.50 D) and 87% had no significant change in refraction (<0.50 D). In terms of astigmatism vectors, other than J 45 (p<0.001), all measures remained invariant over the study period. The incidence of a myopic shift in refraction during incipient presbyopia does not appear to be as large as previously indicated by retrospective research. The changes in axis indicate ocular astigmatism tends towards the against-the-rule direction with age. The structural origin(s) of the reported myopic shift in refraction during incipient presbyopia warrants further investigation. Copyright © 2017 Spanish General Council of Optometry. Published by Elsevier España, S.L.U. All rights reserved.
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Energy-efficient fault tolerance in multiprocessor real-time systems
NASA Astrophysics Data System (ADS)
Guo, Yifeng
The recent progress in the multiprocessor/multicore systems has important implications for real-time system design and operation. From vehicle navigation to space applications as well as industrial control systems, the trend is to deploy multiple processors in real-time systems: systems with 4 -- 8 processors are common, and it is expected that many-core systems with dozens of processing cores will be available in near future. For such systems, in addition to general temporal requirement common for all real-time systems, two additional operational objectives are seen as critical: energy efficiency and fault tolerance. An intriguing dimension of the problem is that energy efficiency and fault tolerance are typically conflicting objectives, due to the fact that tolerating faults (e.g., permanent/transient) often requires extra resources with high energy consumption potential. In this dissertation, various techniques for energy-efficient fault tolerance in multiprocessor real-time systems have been investigated. First, the Reliability-Aware Power Management (RAPM) framework, which can preserve the system reliability with respect to transient faults when Dynamic Voltage Scaling (DVS) is applied for energy savings, is extended to support parallel real-time applications with precedence constraints. Next, the traditional Standby-Sparing (SS) technique for dual processor systems, which takes both transient and permanent faults into consideration while saving energy, is generalized to support multiprocessor systems with arbitrary number of identical processors. Observing the inefficient usage of slack time in the SS technique, a Preference-Oriented Scheduling Framework is designed to address the problem where tasks are given preferences for being executed as soon as possible (ASAP) or as late as possible (ALAP). A preference-oriented earliest deadline (POED) scheduler is proposed and its application in multiprocessor systems for energy-efficient fault tolerance is investigated, where tasks' main copies are executed ASAP while backup copies ALAP to reduce the overlapped execution of main and backup copies of the same task and thus reduce energy consumption. All proposed techniques are evaluated through extensive simulations and compared with other state-of-the-art approaches. The simulation results confirm that the proposed schemes can preserve the system reliability while still achieving substantial energy savings. Finally, for both SS and POED based Energy-Efficient Fault-Tolerant (EEFT) schemes, a series of recovery strategies are designed when more than one (transient and permanent) faults need to be tolerated.
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Hart-Smith, Gene; Tay, Ying Jin; Tng, Wei-Quan; Wilkins, Marc; Ryan, Daniel
2017-01-01
The replacement of histone H2A with its variant forms is critical for regulating all aspects of genome organisation and function. The histone variant H2A.B appeared late in evolution and is most highly expressed in the testis followed by the brain in mammals. This raises the question of what new function(s) H2A.B might impart to chromatin in these important tissues. We have immunoprecipitated the mouse orthologue of H2A.B, H2A.B.3 (H2A.Lap1), from testis chromatin and found this variant to be associated with RNA processing factors and RNA Polymerase (Pol) II. Most interestingly, many of these interactions with H2A.B.3 (Sf3b155, Spt6, DDX39A and RNA Pol II) were inhibited by the presence of endogenous RNA. This histone variant can bind to RNA directly in vitro and in vivo, and associates with mRNA at intron—exon boundaries. This suggests that the ability of H2A.B to bind to RNA negatively regulates its capacity to bind to these factors (Sf3b155, Spt6, DDX39A and RNA Pol II). Unexpectedly, H2A.B.3 forms highly decompacted nuclear subdomains of active chromatin that co-localizes with splicing speckles in male germ cells. H2A.B.3 ChIP-Seq experiments revealed a unique chromatin organization at active genes being not only enriched at the transcription start site (TSS), but also at the beginning of the gene body (but being excluded from the +1 nucleosome) compared to the end of the gene. We also uncover a general histone variant replacement process whereby H2A.B.3 replaces H2A.Z at intron-exon boundaries in the testis and the brain, which positively correlates with expression and exon inclusion. Taken together, we propose that a special mechanism of splicing may occur in the testis and brain whereby H2A.B.3 recruits RNA processing factors from splicing speckles to active genes following its replacement of H2A.Z. PMID:28234895