Science.gov

Sample records for alga marina comestible

  1. MONITORING CHLOROPHYLL-A AS A MEASURE OF ALGAE IN LAKE TEXOMA MARINAS

    EPA Science Inventory

    Lake water quality in five marinas on Lake Texoma was determined over a two year period. Quality parameters were methyl tert-butyl ether, nitrate, some metals, fecal coliform and algae. Common blue-green algae can produce a toxin harmful to other aquatic organisms and humans. ...

  2. MONITORING CHLOROPHYLL-A AS A MEASURE OF ALGAE IN LAKE TEXOMA MARINAS

    EPA Science Inventory

    Lake water quality in five marinas on Lake Texoma was determined over a two year period. Quality parameters were methyl tert-butyl ether, nitrate, some metals, fecal coliform and algae. Common blue-green algae can produce a toxin harmful to other aquatic organisms and humans. ...

  3. Unravelling the pathway of respiratory toxicity in goldlined seabream (Rhabdosargus sarba) induced by the harmful alga Chattonella marina.

    PubMed

    Shen, Min; Xu, Jingliang; Chiang, Michael W L; Au, Doris W T

    2011-08-01

    The harmful alga Chattonella marina has caused massive fish kills and economic losses worldwide. Suffocation is generally believed to be the major cause of fish death by C. marina. However, the specific mechanisms leading to respiratory disorder in fish and subsequent fish kills by C. marina remain unknown. The goldlined seabream, highly susceptible to C. marina, was employed to investigate temporal changes of physiological, histopathological and biochemical parameters related to respiratory function at different stages of exposure to C. marina. Hemoglobin oxidation and blood lyses were not found in goldlined seabream exposed to C. marina, which could not be the key reasons accounting for pO(2) drop in the stressed fish. Gill histopathology such as irregular organization of lamellae, mucous with algal cells trapped in interfilamental spaces, were typical in C. marina exposed fish. A surge of plasma lactate occurred in goldlined seabream shortly after exposure to C. marina (0.5h) and sustained throughout the exposure period, indicating rapid onset of and persistent anaerobic respiration in C. marina exposed fish. Depletion of plasma glucose was clearly evident in goldlined seabream showing stress symptoms and near death. Yet, fish alive in the C. marina bloom did not exhibit plasma glucose depletion. The results suggest that availability of fermentable fuel as indicated by glucose level is critical to determine fish survival in C. marina exposure. Overall, our findings have rebuked the involvement of hemolysins and/or nitric oxide as the culprits for C. marina toxicity to fish. This study is the first to demonstrate the pathway of respiratory toxicity induced by the harmful alga C. marina in fish.

  4. [Vitamin B12-independent strains of Methylophaga marina isolated from Red Sea algae].

    PubMed

    Li, Ts D; Doronina, N V; Ivanova, E G; Trotsenko, Iu A

    2007-01-01

    Two strains (KM3 and KM5) of halophilic methylobacteria isolated from Red Sea algae do not require vitamin B12 for growth and can use methanol, methylamine, dimethylamine, trimethylamine, dimethyl sulfide, and fructose as sources of carbon and energy. The cells of these strains are gram-negative motile monotrichous (strain KM3) or peritrichous (strain KM5) rods. The strains are strictly aerobic and require Na+ ions but not growth factors for growth. They are oxidase- and catalase-positive and reduce nitrates to nitrites. Both strains can grow in a temperature range of 4 to 37 degrees C (with optimal growth at 29-34 degrees C), at pH between 5.5 and 8.5 (with optimal growth at pH 7.5-8.0), and in a range of salt concentrations between 0.5 and 15% NaCl (with optimal growth at 5-9% NaCl). The phospholipids of these strains are dominated by phosphatidylethanolamine and phosphatidylglycerol and also include phosphatidylcholine, phosphatidylserine, and cardiolipin. The dominant fatty acids are C(16:1omega7c) and C(16:0). The major ubiquinone is Q8. The cells accumulate ectoin, glutamate, and sucrose as intracellular osmoprotectants. The strains implement the 2-keto-3-deoxy-6-phosphogluconate-dependent variant of the ribulose monophosphate pathway. The G+C content of the DNA is 44.4-44.7 mol %. Analysis of the 16S rRNA genes showed that both strains belong to Gammaproteobacteria and have a high degree of homology (99.4%) to Methylophaga marina ATCC 35842T . Based on the data of polyphasic taxonomy, strains KM3 and KM5 are identified as new strains M. marina KM3 (VKM B-2386) and M. marina KM5 (VKM B-2387). The ability of these strains to produce auxins (indole-3-acetic acid) suggests their metabolic association with marine algae.

  5. Temporal and spatial dynamics of ephemeral drift-algae in eelgrass, Zostera marina, beds

    NASA Astrophysics Data System (ADS)

    Rasmussen, Jonas Ribergaard; Pedersen, Morten Foldager; Olesen, Birgit; Nielsen, Søren Laurentius; Pedersen, Troels Møller

    2013-03-01

    Aggregations of unattached, filamentous macroalgae showed high temporal and spatial dynamics in two shallow and relatively sheltered eelgrass (Zostera marina) beds in Aarhus Bay and the Isefjord, Denmark. The changes in algal abundance were followed in permanent plots at 1-3 days intervals during three different periods of the growth season (May-September). Drift-algal assemblages were present within the 3000 m2 study areas in relatively high and constant abundance (>47% cover) throughout the study period. However, significant changes in average site cover did occur on short timescales (days) suggesting that variability in algal cover may be undetected in monthly assessments. The changes in cover were caused either by algal growth or by physical forces moving large aggregations of algae into or out of the study area. Within plots (1 m2) variability was even higher and algal cover changed regularly between observations (days). Hence, the algae were continuously rearranged within the eelgrass beds; also during periods with no change in average algal cover. The variability in cover of individual plots was negatively correlated to eelgrass cover, suggesting that algae were retained by the eelgrass leaves. This highly dynamic nature of filamentous macroalgal aggregations in eelgrass beds should be considered when evaluating implications of macroalgal blooms for seagrass growth and survival. A frequent relocation of drift-algae at small spatial scale may moderate the formation of poor oxygen conditions within mats and shorten the duration of exposure experienced by individual shoots.

  6. Mebamamides A and B, Cyclic Lipopeptides Isolated from the Green Alga Derbesia marina.

    PubMed

    Iwasaki, Arihiro; Ohno, Osamu; Sumimoto, Shinpei; Matsubara, Teruhiko; Shimada, Satoshi; Sato, Toshinori; Suenaga, Kiyotake

    2015-04-24

    Mebamamides A and B, new lipopeptides with four d-amino acid residues and a 3,8-dihydroxy-9-methyldecanoic acid residue, were isolated from the green alga Derbesia marina. Their gross structures were elucidated by spectroscopic and ESI-ITMS analyses. The absolute configurations except for the two leucines were revealed based on chiral-phase HPLC analyses of the acid hydrolysate and a modified Mosher's method. A distinction between D-Leu and L-Leu in the sequence was established by the application of a dansyl-Edman method to the partial acid hydrolysate. Mebamamide A did not exhibit any growth inhibitory activity against HeLa and HL60 cells at 10 μM, and mebamamide B did not exhibit any growth inhibitory activity against those cells at 100 μM. Additionally, it was suggested that mebamamide B induced the differentiation of HL60 cells into macrophage-like cells at 100 μM.

  7. Long-Term Field Study Reveals Subtle Effects of the Invasive Alga Sargassum muticum upon the Epibiota of Zostera marina.

    PubMed

    DeAmicis, Stacey; Foggo, Andrew

    2015-01-01

    Invasive species can alter coastal ecosystems both directly, e.g. through competition for substratum and nutrients, and indirectly. Indirect effects may be mediated by creation of dissimilar or inimical habitats, changes in predator and/or prey assemblages, alterations in associated biota, and perturbations of water movement and thermal regimes. Previous studies have shown that invasive algae can modify native habitat architecture, disrupt intricately linked food webs and alter epibiotic assemblages. In the UK, the seagrass Zostera marina supports a diverse epibiotic assemblage, influencing key factors such as sediment dynamics, depositional regime and trophic linkages. Increasing encroachment of the invasive alga Sargassum muticum into seagrass meadows changes the physical and chemical characteristics of the local environment and creates the potential for changes in the epibionts associated with the seagrass blades, threatening the integrity of the seagrass ecosystem. We investigated the effects of S. muticum invasion upon the epibiota of Z. marina in a drowned river valley in SW England seasonally from spring to autumn over four years in an in-situ manipulative experiment, comparing permanent quadrats with and without artificially introduced S. muticum. Epibiota were weighed, identified to the most detailed operational taxonomic unit (OTU) possible, and unitary organisms were enumerated. Multivariate PERMANOVA+ analysis revealed significant differences in epibiont assemblages between Sargassum treatments. Linear mixed effects models indicated that differences in epibiota assemblage composition were not reflected as significant differences in mean biomass per sample, or number of epibiont OTUs per sample. We conclude that S. muticum invasion into Z. marina meadows may significantly alter the species composition and abundance distribution of epibiotic assemblages found on the blades of the seagrass. Thus S. muticum invasion could have more wide-reaching effects on

  8. Long-Term Field Study Reveals Subtle Effects of the Invasive Alga Sargassum muticum upon the Epibiota of Zostera marina

    PubMed Central

    2015-01-01

    Invasive species can alter coastal ecosystems both directly, e.g. through competition for substratum and nutrients, and indirectly. Indirect effects may be mediated by creation of dissimilar or inimical habitats, changes in predator and/or prey assemblages, alterations in associated biota, and perturbations of water movement and thermal regimes. Previous studies have shown that invasive algae can modify native habitat architecture, disrupt intricately linked food webs and alter epibiotic assemblages. In the UK, the seagrass Zostera marina supports a diverse epibiotic assemblage, influencing key factors such as sediment dynamics, depositional regime and trophic linkages. Increasing encroachment of the invasive alga Sargassum muticum into seagrass meadows changes the physical and chemical characteristics of the local environment and creates the potential for changes in the epibionts associated with the seagrass blades, threatening the integrity of the seagrass ecosystem. We investigated the effects of S. muticum invasion upon the epibiota of Z. marina in a drowned river valley in SW England seasonally from spring to autumn over four years in an in-situ manipulative experiment, comparing permanent quadrats with and without artificially introduced S. muticum. Epibiota were weighed, identified to the most detailed operational taxonomic unit (OTU) possible, and unitary organisms were enumerated. Multivariate PERMANOVA+ analysis revealed significant differences in epibiont assemblages between Sargassum treatments. Linear mixed effects models indicated that differences in epibiota assemblage composition were not reflected as significant differences in mean biomass per sample, or number of epibiont OTUs per sample. We conclude that S. muticum invasion into Z. marina meadows may significantly alter the species composition and abundance distribution of epibiotic assemblages found on the blades of the seagrass. Thus S. muticum invasion could have more wide-reaching effects on

  9. Reclassification of Koreibacter algae as a later heterotypic synonym of Paraoerskovia marina and emended descriptions of the genus Paraoerskovia Khan et al. 2009 and of Paraoerskovia marina Khan et al. 2009.

    PubMed

    Schumann, P; Pukall, R; Spröer, C; Stackebrandt, E

    2013-01-01

    16S rRNA gene sequences deposited for the type strains of Paraoerskovia marina (CTT-37(T); GenBank accession no. AB445007) and Koreibacter algae (DSW-2(T); FM995611) show a similarity of 100 %. Consequently, the type strains were subjected to a polyphasic recharacterization under direct comparison in order to clarify their taxonomic position. PvuII RiboPrint patterns and quantitative ratios of cellular fatty acids revealed strain-specific differences between P. marina DSM 21750(T) ( = CTT-37(T)) and K. algae DSM 22126(T) ( = DSW-2(T)). The percentage of DNA-DNA binding of 94 % indicated that the two type strains belong to the same genomospecies. Agreement in the peptidoglycan structure and polar lipid pattern, highly similar fatty acid profiles and MALDI-TOF mass spectra, the ability to produce acid from the same carbon sources, corresponding enzymic activities and DNA G+C contents of 70.8 ± 0.3 mol%, in addition to the consistent characteristics reported in the original descriptions, support the view that the two strains should be affiliated to the same species. According to Rules 38 and 42 of the Bacteriological Code, Koreibacter algae should be reclassified as later heterotypic synonym of Paraoerskovia marina, and the descriptions of the genus Paraoerskovia Khan et al. 2009 and of Paraoerskovia marina Khan et al. 2009 are emended accordingly.

  10. Effect of bacterial biofilms formed on fouling-release coatings from natural seawater and Cobetia marina, on the adhesion of two marine algae.

    PubMed

    Mieszkin, Sophie; Martin-Tanchereau, Pierre; Callow, Maureen E; Callow, James A

    2012-01-01

    Previous studies have shown that bacterial biofilms formed from natural seawater (NSW) enhance the settlement of spores of the green alga Ulva linza, while single-species biofilms may enhance or reduce settlement, or have no effect at all. However, the effect of biofilms on the adhesion strength of algae, and how that may be influenced by coating/surface properties, is not known. In this study, the effect of biofilms formed from natural seawater and the marine bacterium Cobetia marina, on the settlement and the adhesion strength of spores and sporelings of the macroalga U. linza and the diatom Navicula incerta, was evaluated on Intersleek(®) 700, Intersleek(®) 900, poly(dimethylsiloxane) and glass. The settlement and adhesion strength of these algae were strongly influenced by biofilms and their nature. Biofilms formed from NSW enhanced the settlement (attachment) of both algae on all the surfaces while the effect of biofilms formed from C. marina varied with the coating type. The adhesion strength of spores and sporelings of U. linza and diatoms was reduced on all the surfaces biofilmed with C. marina, while adhesion strength on biofilms formed from NSW was dependent on the alga (and on its stage of development in the case of U. linza), and coating type. The results illustrate the complexity of the relationships between fouling algae and bacterial biofilms and suggest the need for caution to avoid over-generalisation.

  11. Removal of harmful alga, Chattonella marina, by recyclable natural magnetic sphalerite.

    PubMed

    Wang, Bo; Wu, Dan; Chu, Ka Him; Ye, Liqun; Yip, Ho Yin; Cai, Zhonghua; Wong, Po Keung

    2017-02-15

    Fish-killing harmful algal blooms (HABs) of Chattonella marina causes serious hazards and risks to fish farming and environment throughout the world. At present, it is necessary to explore cost-effective and recyclable materials for controlling C. marina blooms to reduce the cost and control the potential side effect to the environment. A novel earth-abundant natural magnetic sphalerite (NMS) for removing C. marina was systematically investigated, including the effect of NMS dosage, temperature, pH and salinity on algal removal efficiency. Algal cells could be rapidly removed by NMS (1-2g/L) through adsorption and physical interaction. The algal destruction process was enhanced under the following reaction conditions: temperature>25°C, salinity>30 ppt and pH value<7.5. The reusability of magnetic recycled NMS and effect of light irradiation on algal cell removal were also determined. NMS exhibited excellent stability after repeated algal cell removal, and the efficiency was further enhanced by light illumination. The current study suggested that using NMS to control C. marina blooms could be a novel promising strategy, which is cost-effective, stable, and easy for recycling. Copyright © 2016 Elsevier B.V. All rights reserved.

  12. Production of indoleacetic acid by strains of the epiphytic bacteria Neptunomonas spp. isolated from the red alga Pyropia yezoensis and the seagrass Zostera marina.

    PubMed

    Matsuda, Ryuya; Handayani, Midia Lestari; Sasaki, Hiroyuki; Takechi, Katsuaki; Takano, Hiroyoshi; Takio, Susumu

    2017-10-10

    Neptunomonas sp. BPy-1 is an epiphytic bacterium isolated from in vitro culture of the red alga Pyropia yezoensis. It uses ethanol as a sole carbon source and promotes the growth of host alga. A related bacterium, Neptunomonas sp. BZm-1, was isolated from leaves of Zostera marina found in the Yatsushiro Sea (Japan). BZm-1 showed 99% 16S rRNA sequence identity with Neptunomonas sp. BPy-1. Similar to BPy-1, BZm-1 grew in artificial seawater (ASW) medium containing ethanol or butanol. When thalli were treated with a multi-enzyme cleaner, the growth of treated thalli was retarded, but the addition of BZm-1 to the medium promoted growth. To explore the benefits of epiphytic bacteria, indoleacetic acid (IAA) production by isolated bacteria was examined under conditions of limited nutrients. Salkowski assays and GC-MS analysis revealed that both BZm-1 and BPy-1 excreted IAA during growth in ASW medium containing glucose or ethanol in the presence of tryptophan. In ASW medium containing tryptophan but lacking a carbon source, neither isolate grow, but produced IAA. ASW medium includes nitrate as the sole nitrogen source. In the absence of carbon source, different nitrogen forms in the presence of tryptophan did not affect IAA production by the two isolates. These findings indicate that IAA production by the two isolates is strictly dependent on tryptophan but less affected by carbon and nitrogen sources. Based on the different origins of BPy-1 and BZm-1, this mode of IAA production seems to be conserved among relatives of BPy-1.

  13. ELLIPTOCHLORIS MARINA SP. NOV. (TREBOUXIOPHYCEAE, CHLOROPHYTA), SYMBIOTIC GREEN ALGA OF THE TEMPERATE PACIFIC SEA ANEMONES ANTHOPLEURA XANTHOGRAMMICA AND A. ELEGANTISSIMA (ANTHOZOA, CNIDARIA)(1).

    PubMed

    Letsch, Molly R; Muller-Parker, Gisèle; Friedl, Thomas; Lewis, Louise A

    2009-10-01

    Symbiotic green algae from two species of intertidal Pacific sea anemones, Anthopleura elegantissima and Anthopleura xanthogrammica, were collected from the northeastern Pacific coast of North America across the known range of the symbiont. Freshly isolated Anthopleura symbionts were used for both morphological and molecular analyses because Anthopleura symbiont cultures were not available. Light and transmission electron microscopy supported previous morphological studies, showing the symbionts consist of spherical unicells from 5 to 10 μm in diameter, with numerous vesicles, and a single bilobed chloroplast. Pyrenoids were not seen in LM, but a thylakoid-free area was observed in TEM, consistent with previous findings. Many algal cells extracted from fresh anemone tissue were observed in the process of division, producing two autospores within a maternal cell wall. The morphology of the green symbionts matches that of Elliptochloris Tscherm.-Woess. Molecular phylogenetic analyses of the nuclear SSU rDNA and the plastid encoded gene for the large subunit of RUBISCO (rbcL) support the monophyly of these green algal symbionts, regardless of host species and geographic origin. Phylogenetically, sequences of the Anthopleura symbionts are nested within the genus Elliptochloris and are distinct from sequences of all other Elliptochloris spp. examined. Given the ecological and phylogenetic distinctions among the green algal symbionts in Anthopleura spp. and the named species of Elliptochloris, we designate the green algal symbionts as a new species, Elliptochloris marina (Trebouxiophyceae, Chlorophyta). © 2009 Phycological Society of America.

  14. Algae.

    PubMed

    Raven, John A; Giordano, Mario

    2014-07-07

    Algae frequently get a bad press. Pond slime is a problem in garden pools, algal blooms can produce toxins that incapacitate or kill animals and humans and even the term seaweed is pejorative - a weed being a plant growing in what humans consider to be the wrong place. Positive aspects of algae are generally less newsworthy - they are the basis of marine food webs, supporting fisheries and charismatic marine megafauna from albatrosses to whales, as well as consuming carbon dioxide and producing oxygen. Here we consider what algae are, their diversity in terms of evolutionary origin, size, shape and life cycles, and their role in the natural environment and in human affairs.

  15. ComEst: Completeness Estimator

    NASA Astrophysics Data System (ADS)

    Chiu, I.-Non; Desai, Shantanu; Liu, Jiayi

    2017-08-01

    ComEst calculates the completeness of CCD images conducted in astronomical observations saved in the FITS format. It estimates the completeness of the source finder SExtractor (ascl:1010.064) on the optical and near-infrared (NIR) imaging of point sources or galaxies as a function of flux (or magnitude) directly from the image itself. It uses PyFITS (ascl:1207.009) and GalSim (ascl:1402.009) to perform the end-to-end estimation of the completeness and can also estimate the purity of the source detection.

  16. The ichthyotoxic alga Chattonella marina induces Na{sup +}, K{sup +}-ATPase, and CFTR proteins expression in fish gill chloride cells in vivo

    SciTech Connect

    Tang, Janet Y.M.; Wong, Chris K.C.; Au, Doris W.T. . E-mail: bhdwtau@cityu.edu.hk

    2007-02-02

    Our previous studies demonstrated that the ichthyotoxic Chattonella marina stimulated proliferation of branchial chloride cell (CC) and induced osmotic distress akin to hyperactive elimination of ions in fish (Rhabdosargus sarba). To ascertain the in vivo effects of C. marina on key CC ion transporters, the localization and expression of Na{sup +}, K{sup +}-ATPase (NKA) and cystic fibrosis transmembrane conductance regulator (CFTR) proteins in response to C. marina exposure were investigated, using a quantitative immunocytochemical approach. The polarized distributions of NKA ({alpha} subunit) and CFTR proteins in branchial CCs of R. sarba remained unchanged under C. marina exposure. However, significant inductions of these two ion-transporters were detected in CCs of fish after 6 h exposure. By real-time PCR, no significant changes in gill NKA and CFTR mRNA expressions were detected, suggesting a post-transcriptional pathway is likely involved in regulating the ion transporters abundance. This study is the first to demonstrate the in vivo effects of harmful algal toxin on NKA and CFTR protein expressions in gill transepithelial cells. Taken together, an augmentation of branchial CCs together with hyper-stimulation of NKA and CFTR in CCs attribute to the rapid development of osmotic distress in C. marina susceptible fish.

  17. Toxicity comparison between Chattonella marina and Karenia brevis using marine medaka (Oryzias melastigma): Evidence against the suspected ichthyotoxins of Chattonella marina.

    PubMed

    Shen, Min; Xu, Jingliang; Tsang, Tsui Yun; Au, Doris W T

    2010-07-01

    The marine alga Chattonella marina is often associated with massive fish mortality worldwide. Here, we challenge brevetoxins and free fatty acids as the ichthyotoxins of C. marina by comparing the toxicity of C. marina with a brevetoxins-producing alga Karenia brevis as well as their organic solvent extracts using the seawater medaka Oryzias melastigma. Opposite to K. brevis, toxicity of C. marina was highly correlated with its growth rate and exhibited no dose response relationship between cell density and fish mortality. Fish exposed to C. marina developed significant hyperventilation response, but K. brevis induced hypoventilation response in medaka. Moreover, the organic extracts from C. marina showed no toxicity to fish whereas organic extracts from K. brevis showed significantly higher toxicity than the whole K. brevis culture. The toxins produced by C. marina may be protein in nature or small and labile molecular compounds which are not able to be extracted by traditional organic extraction methods.

  18. Susceptibility of fish to Chattonella marina is determined by its tolerance to hypoxia.

    PubMed

    Shen, Min; Xu, Jingliang; Chan, Alice K Y; Au, Doris W T

    2011-01-01

    The harmful alga Chattonella marina has caused massive fish kills and economic losses worldwide. However, the fish kill mechanisms by C. marina have not been identified. The present study has confirmed that a significant elevation of blood osmolality is the universal response in moribund fish exposed to C. marina and the possible reasons leading to contradictory reports were identified. Both osmotic distress and respiratory impairment are important mechanisms leading to fish kill by C. marina. The susceptibility of marine fish to C. marina appears to be inversely related to their tolerance to hypoxia, with the hypoxia intolerant goldlined seabream being the most susceptible, and the hypoxia tolerant green grouper being the most tolerant to C. marina. Further studies in the marine medaka (Oryzias melastigma) showed that fish susceptibility to C. marina is directly related to susceptibility of the fish to hypoxia, but not related to its tolerance to hypersalinity stress.

  19. Allelopathic effect of Chattonella marina var. marina (Raphidophyceae) on Gymnodinium catenatum (Dinophycea).

    PubMed

    Fernández-Herrera, Leyberth J; Band-Schmidt, Christine J; López-Cortés, David J; Hernández-Guerrero, Claudia J; Bustillos-Guzmán, José J; Núñez-Vázquez, Erick

    2016-01-01

    The allelopathic effect of the raphidophyte Chattonella marina var. marina on the dinoflagellate Gymnodinium catenatum was determined. Both species are harmful algal bloom forming algae, produce toxic metabolites, and can co-exist in the environment. In general, raphidophytes tend to dominate over dinoflagellates, which may indicate an allelopathic effect of the former algae. Strains of C. marina var. marina and G. catenatum isolated from Bahía de La Paz were cultured in bi-algal cultures with and without cell contact. Additionally, cultures of G. catenatum were exposed to cell-free culture filtrates of the raphidophyte to test whether soluble allelopathic molecules are active. During late stationary phase, both species were cultivated in mixed cultures for 72h using the following cell abundance proportions: 20×10(3)cellsL(-1): 20×10(3)cellsL(-1) (1:1; G. catenatum: C. marina); 10×10(3)cellsL(-1): 20×10(3)cellsL(-1) (1:2), and 20×10(3)cellsL(-1): 10×10(3)cellsL(-1) (2:1). Cells of G. catenatum were also exposed to different volumes of cell filtrates of C. marina (10, 20, and 50mL) using the same cell abundance proportions for 24h. Samples were taken daily for cell counts and microscopic observations. Growth inhibition was higher when there was cell contact between both species, however mortality of G. catenatum was also observed without direct cell contact, indicating that toxic metabolites are liberated to the culture medium. Changes in cell morphology of G. catenatum occurred in the presence of cells and filtrates of C. marina, such as loss of flagella and motility, swelling, loss of girdle and sulci, prominent nucleus, rupture of cell membrane, and cell lysis. Induction of temporary cysts was also observed. These results suggest that toxic metabolites are liberated to the medium by C. marina, affecting G. catenatum by inhibiting its growth and causing changes in its life history, providing new insights of interactions between raphidophytes and

  20. Nonpoint Source: Marinas and Boating

    EPA Pesticide Factsheets

    Because marinas are located right at the water's edge, there is a strong potential for marina waters to become contaminated with pollutants generated from the various activities that occur at marinas—such as boat cleaning and fueling operations.

  1. Photoresponse in the heterotrophic marine dinoflagellate Oxyrrhis marina.

    PubMed

    Hartz, Aaron J; Sherr, Barry F; Sherr, Evelyn B

    2011-01-01

    Expressed rhodopsins were detected by proteomic analysis in an investigation of potential signal receptors in the cell membrane of the marine heterotrophic dinoflagellate Oxyrrhis marina (CCMP604). We inferred these to be sensory rhodopsins, a type of G-protein-coupled receptor trans-membrane signaling molecule. Because phototactic behavior based on sensory rhodopsins has been reported in other protists, we investigated the photosensory response of O. marina. This dinoflagellate exhibited strongest positive phototaxis at low levels (2-3 μE/m(2)/s) of white light when the cells were previously light adapted and well fed. Positive phototaxis was also found for blue (450 nm), green (525 nm), and red (680 nm) wavelengths. In a further test, O. marina showed significantly greater phototaxis toward concentrated algal food illuminated by blue light to stimulate red chlorophyll-a autofluorescence in the prey, compared with using bleached algae as prey. Concentration of a cytoplasmic downstream messenger molecule, cyclic adenosine monophosphate, a component of the signaling pathway of G-protein-coupled receptor molecules, rapidly increased in O. marina cells after exposure to white light. In addition, treatment with hydroxylamine, a rhodopsin signaling inhibitor, significantly decreased their phototactic response. Our results demonstrate that a heterotrophic marine dinoflagellate can orient to light based on rhodopsins present in the outer cell membrane and may be able to use photosensory response to detect algal prey based on chlorophyll autofluorescence. © 2011 The Author(s). Journal of Eukaryotic Microbiology© 2011 International Society of Protistologists.

  2. Inhibition of five natural products from Chinese herbs on the growth of Chattonella marina.

    PubMed

    Liu, Fei; He, Zheng-Bing; Li, Hong-Ye; Liu, Jie-Sheng; Yang, Wei-Dong

    2016-09-01

    The effects of five natural products from Chinese herbs including evodiamine, curcumin, 4-methoxysalicylaldehyde, esculin hydrate, and gramine on the growth of Chattonella marina, one of the most noxious red tide algae, were observed. Among them, gramine exhibited the highest inhibitory rate with LC50, 96h of 0.51 mg/l. After exposure to gramine, the activities of superoxide dismutase (SOD) and catalase (CAT), and content of malondialdehyde (MDA) increased in C. marina, suggesting that gramine could induce microalgae oxidative stress. In addition, chlorophyll a and the maximum quantum yield of photosynthesis (Fv/Fm) decreased following exposure to gramine, indicating the inhibition of photosynthesis activity in the microalgae. Combined with the fast inhibition against the algal cells and environmentally friendly character of gramine, we proposed that gramine might be a potential algaecide against marine harmful algae and that the oxidative damage and photosynthesis inhibition might be responsible for the toxicity of gramine on harmful algae.

  3. ComEst: A completeness estimator of source extraction on astronomical imaging

    NASA Astrophysics Data System (ADS)

    Chiu, I.; Desai, S.; Liu, J.

    2016-07-01

    The completeness of source detection is critical for analyzing the photometric and spatial properties of the population of interest observed by astronomical imaging. We present a software package ComEst, which calculates the completeness of source detection on charge-coupled device (CCD) images of astronomical observations, especially for the optical and near-infrared (NIR) imaging of galaxies and point sources. The completeness estimator ComEst is designed for the source finder SExtractor used on the CCD images saved in the Flexible Image Transport System (FITS) format. Specifically, ComEst estimates the completeness of the source detection by deriving the detection rate of synthetic point sources and galaxies simulated on the observed CCD images. In order to capture any observational artifacts or noise properties while deriving the completeness, ComEst directly carries out the detection of simulated sources on the observed images. Given an observed CCD image saved in FITS format, ComEst derives the completeness of the source detection from end to end as a function of source flux (or magnitude) and CCD position. In addition, ComEst can also estimate the purity of the source detection by comparing the catalog of the detected sources to the input catalogs of the simulated sources. We run ComEst on the images from Blanco Cosmology Survey (BCS) and compare the derived completeness as a function of magnitude to the limiting magnitudes derived by using the Signal-to-Noise ratio (SNR) and number count histogram of the detected sources. ComEst is released as a Python package with an easy-to-use syntax and is publicly available at https://github.com/inonchiu/ComEst.

  4. Hydrogen peroxide is not the cause of fish kills associated with Chattonella marina: cytological and physiological evidence.

    PubMed

    Tang, Janet Y M; Anderson, Donald M; Au, Doris W T

    2005-05-15

    Chattonella marina, a harmful algal bloom (HAB) causative species, was used to study the mortality, physiology, and pathology of a marine stenohaline fish, goldlined seabream exposed to the toxic alga. The median lethal time (LT50) was 3 h upon exposure to 8000 cells/ml of C. marina. Significant induction of filamental chloride cells (CCs) [i.e. increases in CC fractional area and in the volume density of CCs], concomitant with significant reduction of blood osmolality, were found in C. marina treated fish. To verify whether the toxicity of C. marina was mediated through oxidative stress, a hydrogen peroxide exposure experiment was carried out and the toxicity as well as cytological and physiological changes were compared with the C. marina treatment. Hydrogen peroxide at a concentration of 500 microM H2O2, (i.e. 25 times higher than that produced by 8000 cells/ml of C. marina (20 microM H2O2)) was unable to induce similar CC alterations and osmoregulatory impairment in fish as observed in the C. marina treatment. Non-specific membrane damage such as severe loss of microvilli projections on the CC apical opening and rupture of epithelial membranes in the lamellae were observed. The LT50 was 6 h, two times longer than that with 8000 cells/ml of C. marina. Based on the cytological and physiological evidence and toxicity data, the mechanism by which C. marina kills fish appears to be very different from that caused by H2O2/ROS. Osmoregulatory distress is the major cause of fish death upon exposure to C. marina.

  5. Larvicidal algae.

    PubMed

    Marten, Gerald G

    2007-01-01

    Although most algae are nutritious food for mosquito larvae, some species kill the larvae when ingested in large quantities. Cyanobacteria (blue-green algae) that kill larvae do so by virtue of toxicity. While blue-green algae toxins may offer possibilities for delivery as larvicides, the toxicity of live blue-green algae does not seem consistent enough for live algae to be useful for mosquito control. Certain species of green algae in the order Chlorococcales kill larvae primarily because they are indigestible. Where these algae are abundant in nature, larvae consume them to the exclusion of other food and then starve. Under the right circumstances, it is possible to introduce indigestible algae into a breeding habitat so they become abundant enough to render it unsuitable for mosquito production. The algae can persist for years, even if the habitat dries periodically. The main limitation of indigestible algae lies in the fact that, under certain conditions, they may not replace all the nutritious algae in the habitat. More research on techniques to ensure complete replacement will be necessary before indigestible algae can go into operational use for mosquito control.

  6. 33 CFR 80.1118 - Marina Del Rey, CA.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Marina Del Rey, CA. 80.1118... NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1118 Marina Del Rey, CA. (a) A line drawn from Marina Del Rey Breakwater South Light 1 to Marina Del Rey Light 4. (b) A line drawn from Marina Del...

  7. The Study of Algae

    ERIC Educational Resources Information Center

    Rushforth, Samuel R.

    1977-01-01

    Included in this introduction to the study of algae are drawings of commonly encountered freshwater algae, a summary of the importance of algae, descriptions of the seven major groups of algae, and techniques for collection and study of algae. (CS)

  8. The Study of Algae

    ERIC Educational Resources Information Center

    Rushforth, Samuel R.

    1977-01-01

    Included in this introduction to the study of algae are drawings of commonly encountered freshwater algae, a summary of the importance of algae, descriptions of the seven major groups of algae, and techniques for collection and study of algae. (CS)

  9. 33 CFR 80.1124 - Ventura Marina, CA.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Ventura Marina, CA. 80.1124... NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1124 Ventura Marina, CA. A line drawn from Ventura Marina South Jetty Light 6 to Ventura Marina Breakwater South Light 3; thence to Ventura...

  10. 18 CFR 1304.404 - Commercial marina harbor limits.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 18 Conservation of Power and Water Resources 2 2010-04-01 2010-04-01 false Commercial marina... ALTERATIONS Miscellaneous § 1304.404 Commercial marina harbor limits. The landward limits of commercial marina... of harbors at commercial marinas will be designated by TVA on the basis of the size and extent...

  11. 18 CFR 1304.404 - Commercial marina harbor limits.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 18 Conservation of Power and Water Resources 2 2011-04-01 2011-04-01 false Commercial marina... ALTERATIONS Miscellaneous § 1304.404 Commercial marina harbor limits. The landward limits of commercial marina... of harbors at commercial marinas will be designated by TVA on the basis of the size and extent...

  12. Isolation and characterization of a marine algicidal bacterium against the harmful raphidophyceae Chattonella marina.

    PubMed

    Kim, Yun Sook; Lee, Dae-Sung; Jeong, Seong-Yun; Lee, Woe Jae; Lee, Myung-Suk

    2009-02-01

    A bacterial strain named AB-4 showing algicidal activity against Chattonella marina was isolated from coastal water of ULjin, Republic of Korea. The isolated strain was identified as Bacillus sp. by culture morphology, biochemical reactions, and homology research based on 16S rDNA. The bacterial culture led to the lysis of algal cells, suggesting that the isolated strain produced a latent algal-lytic compound. Amongst changes in algicidal activity by different culture filtrate volumes, the 10% (100 microl/ml) concentration showed the biggest change in algicidal activity; there, estimated algicidal activity was 95%. The swimming movements of Chattonella marina cells were inhibited because of treatment of the bacterial culture; subsequently, Chattonella marina cells became swollen and rounded. With longer exposure time, algal cells were disrupted and cellular components lost their integrity and decomposed. The released algicide(s) were heat-tolerant and stable in pH variations, except pH 3, 4, and 5. Culture filtrate of Bacillus sp. AB-4 was toxic against harmful algae bloom (HAB) species and nontoxic against livefood organisms. Bacillus sp. AB-4 showed comparatively strong activity against Akashiwo sanguinea, Fibriocapsa japonica, Heterosigma akashiwo, and Scrippsiella trochoidea. These results suggest that the algicidal activity of Bacillus sp. AB-4 is potentially useful for controlling outbreaks of Chattonella marina.

  13. Algae Resources

    SciTech Connect

    2016-06-01

    Algae are highly efficient at producing biomass, and they can be found all over the planet. Many use sunlight and nutrients to create biomass, which contain key components—including lipids, proteins, and carbohydrates— that can be converted and upgraded to a variety of biofuels and products. A functional algal biofuels production system requires resources such as suitable land and climate, sustainable management of water resources, a supplemental carbon dioxide (CO2) supply, and other nutrients (e.g., nitrogen and phosphorus). Algae can be an attractive feedstock for many locations in the United States because their diversity allows for highpotential biomass yields in a variety of climates and environments. Depending on the strain, algae can grow by using fresh, saline, or brackish water from surface water sources, groundwater, or seawater. Additionally, they can grow in water from second-use sources such as treated industrial wastewater; municipal, agricultural, or aquaculture wastewater; or produced water generated from oil and gas drilling operations.

  14. Effects of pulp mill chlorate on Baltic Sea algae.

    PubMed

    Rosemarin, A; Lehtinen, K J; Notini, M; Mattson, J

    1994-01-01

    The long-term effects of pulp mill chlorate on different algal species of the Baltic Sea were studied in land-based model ecosystems simulating the littoral zone. Brown algae (Phaeophyta) exhibited an extraordinarily high sensitivity to chlorate and pulp mill effluents containing chlorate. All brown algal species ceased growth or showed major signs of toxicity at all concentrations tested, down to microgram per litre levels. EC50 levels for growth of Fucus vesiculosus were about 80-100 microg ClO3- litre(-1). Blue-green algae (Cyanophyta) were not deleteriously affected nor were green algae (Chlorophyta). The perennial and annual species of red algae (Rhodophyta) were also unaffected by the effluents. Diatoms did not show any sensitivity and phytoplankton (fresh- and brackish water) were particularly insensitive. A phanerogam, Zostera marina was also unaffected by the treatments.

  15. 17. MARINA WAY, HARBOUR WAY, AND MARITIME CHILD DEVELOPMENT CENTER ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    17. MARINA WAY, HARBOUR WAY, AND MARITIME CHILD DEVELOPMENT CENTER (SEE ALSO HABS No. CA-2718), WITH RICHMOND SHIPYARD NO. 3. S. - Rosie the Riveter National Historical Park, 1401 Marina Way South, Richmond, Contra Costa County, CA

  16. 33 CFR 80.1118 - Marina Del Rey, CA.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Marina Del Rey, CA. 80.1118 Section 80.1118 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1118 Marina Del Rey, CA. (a) A line drawn from Marina Del Rey Breakwater South Light...

  17. ASSESSING ROOT DEMOGRAPHY AND CARBOHYDRATE DYNAMICS OF ZOSTERA MARINA

    EPA Science Inventory

    To help establish protective criteria for Zostera marina a more complete understanding of the factors affecting the status, condition, distribution and ecophysiology of Z. marina is needed. While Z. marina shoots are readily observed, assessing growth and carbon dynamics of roots...

  18. ASSESSING ROOT DEMOGRAPHY AND CARBOHYDRATE DYNAMICS OF ZOSTERA MARINA

    EPA Science Inventory

    To help establish protective criteria for Zostera marina a more complete understanding of the factors affecting the status, condition, distribution and ecophysiology of Z. marina is needed. While Z. marina shoots are readily observed, assessing growth and carbon dynamics of roots...

  19. Application of hyper-branched rolling circle amplification (HRCA) and HRCA-based strip test for the detection of Chattonella marina.

    PubMed

    Nie, Xiaoli; Zhang, Chunyun; Wang, Yuanyuan; Guo, Changlu; Zhou, Jin; Chen, Guofu

    2017-06-01

    Harmful algal blooms (HABs) are global threats to marine ecosystems, fisheries, and human health. Therefore, developing effective and accurate methods for identifying causative algae and monitoring seawater quality is urgent. However, traditional, microscopy-based methods are complex, inaccurate, and time-consuming. Here, we present a novel method for effective and sensitive detection of Chattonella marina using hyper-branched rolling circle amplification (HRCA) and HRCA-based strip test (HBST). The large subunit (LSU) ribosomal DNA (rDNA) D1-D2 region of C. marina was firstly sequenced to design a species-specific padlock probe (PLP). The HRCA reaction with two amplification primers and further HBST for C. marina was established. The optimized reaction conditions for HRCA were PLP concentration, 20 pM; ligation temperature, 65 °C; ligation time, 60 min; amplification temperature, 61 °C; and amplification time, 60 min. The developed HBST detection procedure involved HRCA reaction, test strip preparation, hybridization, coloration, and judgment of hybridization by the naked eye. Specificity and sensitivity of the established methods were validated. Moreover, the results showed that the established detection methods were specific and sensitive to C. marina. The detection limits of HRCA and HBST assays were 10 copies and 1 copy μL(-1) of plasmid with LSU rDNA of C. marina, which are of two and three respective magnitude orders higher than conventional PCR. Finally, the protocols were applied to the simulated field samples and the results showed that the developed HBST assay had higher detection sensitivity than HRCA and PCR. In conclusion, the methods presented in this study are promising for sensitive, intuitive, and specific detection of C. marina in field monitoring natural samples and may provide a good detection model for other harmful algae in the future.

  20. Saint Marina: the protectress of nephrology.

    PubMed

    Eftychiadis, A C; Marketos, S G

    1999-01-01

    Saint virgin and martyr Marina (Margarita) of Antioch in Pisidia (255-270) is recognized as the patron saint of kidney sufferers and the protectress of nephrology. Beginning in the 13th century she heals in particular patients suffering from nephropathies, pregnant women having a difficult childbirth, barren women and sickly children. She protects the patients from every side effect and complication. Saint Marina is represented in hagiography as a victor, defeating the dragon satan, holding a hammer or a cross and wearing a belt around her back in the area of kidneys. According to writers, artists and sculptors the belt is the perceivable means of Saint Marina for the miraculous recovery from and healing of kidney diseases. Therefore, kidney sufferers and pregnant women put belts upon her relics for blessing and then wore them. From the Middle Ages and Renaissance and up to the contemporary period Saint Marina (Margarita) was considered the patron saint of kidney sufferers. Justifiably she is recognized by the modern medical world as the protectress of nephrology.

  1. Eelgrass (Zostera marina) Food Web Structure in Different Environmental Settings.

    PubMed

    Thormar, Jonas; Hasler-Sheetal, Harald; Baden, Susanne; Boström, Christoffer; Clausen, Kevin Kuhlmann; Krause-Jensen, Dorte; Olesen, Birgit; Rasmussen, Jonas Ribergaard; Svensson, Carl Johan; Holmer, Marianne

    2016-01-01

    This study compares the structure of eelgrass (Zostera marina L.) meadows and associated food webs in two eelgrass habitats in Denmark, differing in exposure, connection to the open sea, nutrient enrichment and water transparency. Meadow structure strongly reflected the environmental conditions in each habitat. The eutrophicated, protected site had higher biomass of filamentous algae, lower eelgrass biomass and shoot density, longer and narrower leaves, and higher above to below ground biomass ratio compared to the less nutrient-enriched and more exposed site. The faunal community composition and food web structure also differed markedly between sites with the eutrophicated, enclosed site having higher biomass of consumers and less complex food web. These relationships resulted in a column shaped biomass distribution of the consumers at the eutrophicated site whereas the less nutrient-rich site showed a pyramidal biomass distribution of consumers coupled with a more diverse consumer community. The differences in meadow and food web structure of the two seagrass habitats, suggest how physical setting may shape ecosystem response and resilience to anthropogenic pressure. We encourage larger, replicated studies to further disentangle the effects of different environmental variables on seagrass food web structure.

  2. Eelgrass (Zostera marina) Food Web Structure in Different Environmental Settings

    PubMed Central

    Thormar, Jonas; Hasler-Sheetal, Harald; Baden, Susanne; Boström, Christoffer; Clausen, Kevin Kuhlmann; Krause-Jensen, Dorte; Olesen, Birgit; Rasmussen, Jonas Ribergaard; Svensson, Carl Johan; Holmer, Marianne

    2016-01-01

    This study compares the structure of eelgrass (Zostera marina L.) meadows and associated food webs in two eelgrass habitats in Denmark, differing in exposure, connection to the open sea, nutrient enrichment and water transparency. Meadow structure strongly reflected the environmental conditions in each habitat. The eutrophicated, protected site had higher biomass of filamentous algae, lower eelgrass biomass and shoot density, longer and narrower leaves, and higher above to below ground biomass ratio compared to the less nutrient-enriched and more exposed site. The faunal community composition and food web structure also differed markedly between sites with the eutrophicated, enclosed site having higher biomass of consumers and less complex food web. These relationships resulted in a column shaped biomass distribution of the consumers at the eutrophicated site whereas the less nutrient-rich site showed a pyramidal biomass distribution of consumers coupled with a more diverse consumer community. The differences in meadow and food web structure of the two seagrass habitats, suggest how physical setting may shape ecosystem response and resilience to anthropogenic pressure. We encourage larger, replicated studies to further disentangle the effects of different environmental variables on seagrass food web structure. PMID:26752412

  3. Effect of Alexandrium tamarense on three bloom-forming algae

    NASA Astrophysics Data System (ADS)

    Yin, Juan; Xie, Jin; Yang, Weidong; Li, Hongye; Liu, Jiesheng

    2010-07-01

    We investigated the allelopathic properties of Alexandrium tamarense (Laboar) Balech on the growth of Prorocentrum donghaiense Lu, Chattonella marina (Subrahmanyan) Hara et Chihara and Heterosigma akashiwo (Hada) Hada in a laboratory experiment. We examined the growth of A. tamarense, C. marina, P. donghaiense and H. Akashiwo in co-cultures and the effect of filtrates from A. tamarense cultures in various growth phases, on the three harmful algal bloom (HAB)-forming algae. In co-cultures with A. tamarense, both C. marina and H. akashiwo were dramatically suppressed at high cell densities; in contrast, the growth of P. donghaiense varied in different inoculative ratios of A. tamarense and P. donghaiense. When the ratio was 1:1 ( P. donghaiense: A. tamarense), growth of P. donghaiense was inhibited considerably, while the growth of P. donghaiense was almost the same as that of the control when the ratio was 9:1. The growth difference of P. donghaiense, C. marina and H. akashiwo when co-cultured with A. tamarense indicated that the allelopathic effect may be one of the important factors in algal competition and phytoplankton succession involving A. tamarense. In addition, the filtrate from A. tamarense culture had negative impacts on these three HAB algae, and such inhibition varied with different growth phases of A. tamarense in parallel with reported values of PSP toxin content in Alexandrium cells. This implied that PSP toxin was possibly involved in allelopathy of A. tamarense. However, the rapid decomposition and inactivation of PSP toxin above pH 7 weakened this possibility. Further studies on the allelochemicals responsible for the allelopathy of A. tamarense need to be carried out in future.

  4. A Guide for Marina and Harbor Managers

    DTIC Science & Technology

    1991-03-01

    recommend changes in the context and format, - 1o determine possible future uses or futurp =* -s. Ten small boat harbor and marinas were selected...managers were asked if there were ways to improve the guide by adding information, deleting information, or changing the format. None of the managers...felt that any of 37 the information should be deleted, some recommendations were made for format changes , and all of the managers had recommendations

  5. Magnetic separation of algae

    SciTech Connect

    Nath, Pulak; Twary, Scott N.

    2016-04-26

    Described herein are methods and systems for harvesting, collecting, separating and/or dewatering algae using iron based salts combined with a magnetic field gradient to separate algae from an aqueous solution.

  6. Non-structural Carbohydrate Reserves of Eelgrass Zostera marina

    Treesearch

    Marianne K. Burke; William C. Dennison; Kenneth A. Moore

    1996-01-01

    The high minimum light requirement of eelgrass Zostera marina L. suggests that this species has difficulty in maintaining a positive carbon balance except under high fight conditions. The carbon balance of Z. marina can be studied by following seasonal changes in non-structural carbohydrate (NSC) reserves, however, little is...

  7. 33 CFR 110.111 - Marina del Rey Harbor, Calif.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Marina del Rey Harbor, Calif. 110.111 Section 110.111 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY ANCHORAGES ANCHORAGE REGULATIONS Special Anchorage Areas § 110.111 Marina del Rey Harbor, Calif. An area...

  8. Repair and Dredging of Bear Creek Marina Final Environmental Assessment

    DTIC Science & Technology

    2007-06-01

    Leatherback sea turtle (Dermochelys coriacea), Atlantic hawksbill sea turtle , (Eretmochelys imbricate), the green turtle (Chelonia mydas), the loggerhead...biological resources. Threatened and endangered species (sturgeon and sea turtles ) would not be affected. Marine mammals (dolphins) would not be...would also restrict sediments from affecting seagrass beds outside of the marina and deter sturgeon, sea turtles and marina mammals from entering the

  9. TOTAL DISSOLVED AND BIOAVAILABLE METALS AT LAKE TEXOMA MARINAS

    EPA Science Inventory

    Dissolved metals in water and total metals in sediments have been measured at marina areas in Lake Texoma during June 1999 to October 2001, and October 2001, respectively. The metals most often found in the highest concentrations in marina water were Na and Ca, followed by Mg an...

  10. MARINA & MAINE STREETS FACING NW. DARKER COLORED HOME ON ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    MARINA & MAINE STREETS FACING NW. DARKER COLORED HOME ON SE CORNER. NYSTROM VILLAGE, LIKE ATCHISON VILLAGE (HAER CA-326-N), HOUSED WORKERS DURING WORLD WAR II - Rosie the Riveter National Historical Park, Nystrom Village, Marina & Maine Streets, Richmond, Contra Costa County, CA

  11. 33 CFR 80.1118 - Marina Del Rey, CA.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Marina Del Rey, CA. 80.1118 Section 80.1118 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1118 Marina Del Rey, CA. (a) A line drawn from...

  12. 33 CFR 80.1124 - Ventura Marina, CA.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Ventura Marina, CA. 80.1124 Section 80.1124 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1124 Ventura Marina, CA. A line drawn from...

  13. 33 CFR 80.1118 - Marina Del Rey, CA.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Marina Del Rey, CA. 80.1118 Section 80.1118 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1118 Marina Del Rey, CA. (a) A line drawn from...

  14. 33 CFR 80.1124 - Ventura Marina, CA.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Ventura Marina, CA. 80.1124 Section 80.1124 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1124 Ventura Marina, CA. A line drawn from...

  15. 33 CFR 80.1124 - Ventura Marina, CA.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Ventura Marina, CA. 80.1124 Section 80.1124 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1124 Ventura Marina, CA. A line drawn from...

  16. 33 CFR 80.1124 - Ventura Marina, CA.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Ventura Marina, CA. 80.1124 Section 80.1124 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1124 Ventura Marina, CA. A line drawn from...

  17. 33 CFR 80.1118 - Marina Del Rey, CA.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Marina Del Rey, CA. 80.1118 Section 80.1118 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1118 Marina Del Rey, CA. (a) A line drawn from...

  18. TOTAL DISSOLVED AND BIOAVAILABLE METALS AT LAKE TEXOMA MARINAS

    EPA Science Inventory

    Dissolved metals in water and total metals in sediments have been measured at marina areas in Lake Texoma during June 1999 to October 2001, and October 2001, respectively. The metals most often found in the highest concentrations in marina water were Na and Ca, followed by Mg an...

  19. Alkaloids in Marine Algae

    PubMed Central

    Güven, Kasım Cemal; Percot, Aline; Sezik, Ekrem

    2010-01-01

    This paper presents the alkaloids found in green, brown and red marine algae. Algal chemistry has interested many researchers in order to develop new drugs, as algae include compounds with functional groups which are characteristic from this particular source. Among these compounds, alkaloids present special interest because of their pharmacological activities. Alkaloid chemistry has been widely studied in terrestrial plants, but the number of studies in algae is insignificant. In this review, a detailed account of macro algae alkaloids with their structure and pharmacological activities is presented. The alkaloids found in marine algae may be divided into three groups: 1. Phenylethylamine alkaloids, 2. Indole and halogenated indole alkaloids, 3. Other alkaloids. PMID:20390105

  20. Effect of lycopene from Chlorella marina on high cholesterol-induced oxidative damage and inflammation in rats.

    PubMed

    Renju, G L; Kurup, G Muraleedhara; Saritha Kumari, C H

    2014-02-01

    Even though the role of all-trans lycopene from tomato in controlling atherosclerosis was reported, but no report is available on the cis-isomer of lycopene obtained from an easily available source green algae Chlorella marina. So in this study, Sprague Dawley rats fed with high-cholesterol diet were given standard drug lovastatin; algal lycopene (AL) (cis/all-trans 40:60) and tomato all-trans lycopene (TL) and the following parameters were studied. Total cholesterol, low-density lipoprotein, triglycerides were decreased significantly and the high-density lipoprotein levels were increased on treatment with AL. The activities of antioxidant enzymes catalase, superoxide dismutase, glutathione peroxidase, and glutathione reductase were found to be increased, whereas thiobarbituric acid reactive substances levels were decreased in AL when compared to the drug and TL-treated rats. The activities of inflammatory marker enzymes like cyclooxygenase, 15-lipoxygenase in monocytes and myeloperoxidase, C-reactive protein and ceruloplasmin levels in serum were found to be decreased on treatment with AL. Histopathological studies revealed that lycopene from this alga could reduce fatty liver and aortic plaque when compared to the drug and TL. Algal lycopene showed very significant antioxidant and anti-inflammatory effect in high-cholesterol fed rats. Therefore, AL from C. marina would be recommended for the treatment of hyperlipidemia.

  1. A New Heterotrophic Cryptomonad: Hemiarma marina n. g., n. sp.

    PubMed

    Shiratori, Takashi; Ishida, Ken-Ichiro

    2016-11-01

    We report a new heterotrophic cryptomonad Hemiarma marina n. g., n. sp. that was collected from a seaweed sample from the Republic of Palau. In our molecular phylogenetic analyses using the small subunit ribosomal RNA gene, H. marina formed a clade with two marine environmental sequences, and the clade was placed as a sister lineage of the freshwater cryptomonad environmental clade CRY1. Alternatively, in the concatenated large and small subunit ribosomal RNA gene phylogeny, H. marina was placed as a sister lineage of Goniomonas. Light and electron microscopic observations showed that H. marina shares several ultrastructural features with cryptomonads, such as flattened mitochondrial cristae, a periplast cell covering, and ejectisomes that consist of two coiled ribbon structures. On the other hand, H. marina exhibited unique behaviors, such as attaching to substrates with its posterior flagellum and displaying a jumping motion. H. marina also had unique periplast arrangement and flagellar transitional region. On the basis of both molecular and morphological information, we concluded that H. marina should be treated as new genus and species of cryptomonads. © 2016 The Author(s) Journal of Eukaryotic Microbiology © 2016 International Society of Protistologists.

  2. DIGITAL IMAGE ANALYSIS OF ZOSTERA MARINA LEAF INJURY

    EPA Science Inventory

    Current methods for assessing leaf injury in Zostera marina (eelgrass) utilize subjective indexes for desiccation injury and wasting disease. Because of the subjective nature of these measures, they are inherently imprecise making them difficult to use in quantifying complex leaf...

  3. DIGITAL IMAGE ANALYSIS OF ZOSTERA MARINA LEAF INJURY

    EPA Science Inventory

    Current methods for assessing leaf injury in Zostera marina (eelgrass) utilize subjective indexes for desiccation injury and wasting disease. Because of the subjective nature of these measures, they are inherently imprecise making them difficult to use in quantifying complex leaf...

  4. The Importance of Zostera marina to a Local Food Web Based on the Analysis of Compound Specific Isotopes in Maquoit Bay, Gulf of Maine

    NASA Astrophysics Data System (ADS)

    Doolittle, H. A.; Johnson, B. J.; Ambrose, W. G.; Locke, W.; Harris, C. M.

    2010-12-01

    Zostera marina (also known as eelgrass) is an important primary producer in near shore ecosystems in the Gulf of Maine, providing both habitat and nutrients for a variety of organisms (e.g., crustaceans, polychaetes, gastropods, and fish). The purpose of this study is to use compound specific δ13C analyses of essential amino acids to determine the degree to which organic matter derived from isotopically distinct primary producers (e.g., eelgrass, phytoplankton, and epiphytic algae) contribute to the diets of snails, shrimp, and fish in an eelgrass system in Casco Bay. Maquoit Bay, located in northwestern Casco Bay, in the Gulf of Maine, is a shallow estuarine system that is characterized by silt and clay sized sediments and the presence of extensive eelgrass beds. Amino acid concentrations and δ13C compositions were determined for a variety of sample-types collected in July-August, 2010, from three sites in the study area, including muscle tissue from Tautogolabrus adspersus (cunner), Gasterosteus aculeatus (3-spined stickleback), Nassarius obsoletus (snail), and Mysis spp. (shrimp), seston (i.e., phytoplankton), Z. marina, and epiphytic algae. TFAA amino acid derivatives of the total hydrolyzate were analyzed by GC-FID for amino acid concentration, and by GC-c-IRMS- for carbon isotope composition. Muscle tissue was dominated by glutamic and aspartic acids, and leucine, whereas Zostera marina was dominated by aspartic and glutamic acids, and proline. Phenylalanine and leucine in Z. marina are approximately 10 ‰ enriched in 13C relative to these same amino acids in the seston. The carbon isotope values of these essential amino acids are significantly more enriched in 13C for N. obsoletus than for T. adspersus, G. aculeatus, and Mysis spp. These data suggest that organic matter derived from Z. marina and/or epiphytic algae is more important in the diets of N. obsoletus, and organic matter derived from seston is more important for the diets of T. adspersus, G

  5. Algae Derived Biofuel

    SciTech Connect

    Jahan, Kauser

    2015-03-31

    One of the most promising fuel alternatives is algae biodiesel. Algae reproduce quickly, produce oils more efficiently than crop plants, and require relatively few nutrients for growth. These nutrients can potentially be derived from inexpensive waste sources such as flue gas and wastewater, providing a mutual benefit of helping to mitigate carbon dioxide waste. Algae can also be grown on land unsuitable for agricultural purposes, eliminating competition with food sources. This project focused on cultivating select algae species under various environmental conditions to optimize oil yield. Membrane studies were also conducted to transfer carbon di-oxide more efficiently. An LCA study was also conducted to investigate the energy intensive steps in algae cultivation.

  6. 75 FR 1110 - Culturally Significant Objects Imported for Exhibition Determinations: “Marina Abramovic: The...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-01-08

    ... Exhibition Determinations: ``Marina Abramovic: The Artist Is Present'' SUMMARY: Notice is hereby given of the... included in the exhibition ``Marina Abramovic: The Artist Is Present,'' imported from abroad for temporary...

  7. Roseivirga marina sp. nov., isolated from seawater.

    PubMed

    Pan, Jie; Sun, Cong; Wang, Rui-Jun; Wu, Min

    2015-11-01

    Strain PSRT was isolated from seawater of the Pacific Ocean. Cells of the strain were Gram-stain-negative, strictly aerobic, rod-shaped and motile by gliding. Growth was observed at 4-40 °C (optimum 25-30 °C), at pH 6.0-9.5 (optimum pH 7.0-7.5) and with 0.5-8 % (w/v) NaCl (optimum 2-3 %). The major fatty acids were iso-C15 : 1 G (18.9 %), iso-C15 : 0 (26.3 %) and iso-C17 : 0 3-OH (17.9 %). The predominant isoprenoid quinone was MK-7, and the DNA G+C content was 49.3 mol%. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain PSRT was most closely related to Roseivirga spongicola UST030701-084T (96.9 % 16S rRNA gene sequence similarity), and they formed a distinct clade in neighbour-joining, maximum-likelihood and maximum-parsimony phylogenetic trees with significant bootstrap supports. Based on phenotypic, chemotaxonomic and phylogenetic characteristics, strain PSRT represents a novel species of the genus Roseivirga, for which the name Roseivirga marina sp. nov. is proposed. The type strain is PSRT ( = MCCC 1K00459T = KCTC 42444T).

  8. Salinity tolerance and genetic diversity of the dinoflagellate Oxyrrhis marina

    NASA Astrophysics Data System (ADS)

    Zhang, Jingyu; Li, Yun; Chen, Jiaxin

    2010-03-01

    To evaluate the relationship between salinity tolerance and genetic diversity of plankton, we collected a wild species of plankton from Taipingjiao, Qingdao. The fragment of ITS1-5.8S rDNA-ITS2 was extracted and sequenced. The results showed that the plankton belongs to Oxyrrhis marina. The salinity tolerance of O. marina ranges from 4 to 60. Seven selected groups were built up to evaluate salinity tolerance and to assess genetic diversity by RAPD. The salinity tolerance comparison revealed considerable differences among groups: the strains of O. marina in group 4 could survive under salinity from 4 to 32, while the strains selected for salinity 60 died under the salinity lower than 16. Analysis of genetic diversity of the seven groups showed that the mean genetic diversity index value was 0.28, but it was only 0.16 in selected group of 4 and was 0.24 for group 60. The result of AMOVA suggested a significantly positive relationship between the salinity tolerance and genetic diversity of O. marina ( P<0.01). This study indicates that consideration of intraspecific genetic divergence in O. marina might be indispensable when using it as a model in the study of salinity tolerance of wild plankton.

  9. Economic Impacts from Spending by Marina Slip Reenter at Raystown Lake

    DTIC Science & Technology

    2008-02-01

    Reservoir, marina • Raystown Lake , marina • Hartwell Lake , private dock • Lake Barkley, private dock • Lake Sidney Lanier, private dock and marina ERDC...ney Lanier ( Georgia ), Raystown Lake (Pennsylvania), and Harry S. Tru- man Dam and Reservoir (Missouri). The ERB staff designed the survey...ER D C/ EL T R- 08 -5 Recreation Management Support Program Economic Impacts from Spending by Marina Slip Renters at Raystown Lake

  10. CHATTONELLA MARINA (RAPHIDOPHYCEAE), A POTENTIALLY TOXIC ALGA IN THE SALTON SEA, CALIFORNIA. (R826552)

    EPA Science Inventory

    The perspectives, information and conclusions conveyed in research project abstracts, progress reports, final reports, journal abstracts and journal publications convey the viewpoints of the principal investigator and may not represent the views and policies of ORD and EPA. Concl...

  11. Analysis of EST data of the marine protist Oxyrrhis marina, an emerging model for alveolate biology and evolution

    PubMed Central

    2014-01-01

    Background The alveolates include a large number of important lineages of protists and algae, among which are three major eukaryotic groups: ciliates, apicomplexans and dinoflagellates. Collectively alveolates are present in virtually every environment and include a vast diversity of cell shapes, molecular and cellular features and feeding modes including lifestyles such as phototrophy, phagotrophy/predation and intracellular parasitism, in addition to a variety of symbiotic associations. Oxyrrhis marina is a well-known model for heterotrophic protist biology, and is now emerging as a useful organism to explore the many changes that occurred during the origin and diversification of dinoflagellates by virtue of its phylogenetic position at the base of the dinoflagellate tree. Results We have generated and analysed expressed sequence tag (EST) sequences from the alveolate Oxyrrhis marina in order to shed light on the evolution of a number of dinoflagellate characteristics, especially regarding the emergence of highly unusual genomic features. We found that O. marina harbours extensive gene redundancy, indicating high rates of gene duplication and transcription from multiple genomic loci. In addition, we observed a correlation between expression level and copy number in several genes, suggesting that copy number may contribute to determining transcript levels for some genes. Finally, we analyze the genes and predicted products of the recently discovered Dinoflagellate Viral Nuclear Protein, and several cases of horizontally acquired genes. Conclusion The dataset presented here has proven very valuable for studying this important group of protists. Our analysis indicates that gene redundancy is a pervasive feature of dinoflagellate genomes, thus the mechanisms involved in its generation must have arisen early in the evolution of the group. PMID:24512041

  12. Blue-green algae

    MedlinePlus

    ... conditions, cancer, fatty liver disease, hepatitis C, and arsenic poisoning. Blue-green algae are applied inside the mouth ... people with insulin resistance due to HIV medication. Arsenic poisoning. Early research shows that taking 250 mg of ...

  13. 78 FR 29022 - Safety Zone; Fourth of July Fireworks, Berkeley Marina, Berkeley, CA

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-05-17

    ... SECURITY Coast Guard 33 CFR Part 165 Safety Zone; Fourth of July Fireworks, Berkeley Marina, Berkeley, CA... enforce the safety zone for the Berkeley Marina Fourth of July Fireworks display in the Captain of the...'19'' W (NAD 83) for the Berkeley Marina Fourth of July Fireworks display listed in 33 CFR 165.1191...

  14. 77 FR 37604 - Safety Zone; Fourth of July Fireworks, Berkeley Marina, Berkeley, CA

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-06-22

    ... SECURITY Coast Guard 33 CFR Part 165 Safety Zone; Fourth of July Fireworks, Berkeley Marina, Berkeley, CA... enforce the safety zone for the Berkeley Marina Fourth of July Fireworks display in the Captain of the... Marina Fourth of July Fireworks display in 33 CFR 165.1191. This safety zone will be in effect from 9:30...

  15. 75 FR 4783 - Federal Consistency Appeal by Villa Marina Yacht Harbour, Inc.

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-01-29

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration Federal Consistency Appeal by Villa Marina Yacht Harbour... record in an administrative appeal filed by Villa Marina Yacht Harbour, Inc. (Villa Marina). DATES: The...

  16. Aureispira marina gen. nov., sp. nov., a gliding, arachidonic acid-containing bacterium isolated from the southern coastline of Thailand.

    PubMed

    Hosoya, Shoichi; Arunpairojana, Vullapa; Suwannachart, Chatrudee; Kanjana-Opas, Akkharawit; Yokota, Akira

    2006-12-01

    Three strains of gliding bacteria, 24(T), 62 and 71, isolated from a marine sponge and algae from the southern coastline of Thailand, were studied using a polyphasic approach to clarify their taxonomic positions. A phylogenetic analysis based on 16S rRNA gene sequences showed that the three isolates formed a distinct lineage within the family 'Saprospiraceae' of the phylum Bacteroidetes and were related to members of the genus Saprospira. The G+C contents of the isolates were in the range 38-39 mol%. The major respiratory quinone was MK-7. The predominant cellular fatty acids were 20 : 4omega6c (arachidonic acid), 16 : 0 and iso-17 : 0. On the basis of morphological, physiological and chemotaxonomic characteristics, together with DNA-DNA hybridization data and 16S rRNA gene sequences, the isolates represent a novel species of a novel genus, for which the name Aureispira marina gen. nov., sp. nov. is proposed. The type strain of Aureispira marina is 24(T) (=IAM 15389(T)=TISTR 1719(T)).

  17. Cumulative impact of marinas on estuarine water quality

    NASA Astrophysics Data System (ADS)

    McAllister, T. L.; Overton, M. F.; Brill, E. D.

    1996-05-01

    The purpose of this work is to present a modeling approach for assessing and managing the cumulative impact of marinas on estuarine systems. In doing so, both a water-quality model and a planning and management model are developed. The water-quality model predicts biochemical oxygen demand (BOD) and fecal coliform (FC) loadings from marina sources in a hypothetical North Carolina estuary. By running the water-quality model repeatedly with varied loading input, impact coefficients are determined. These impact coefficients are used in the planning and management model, the output of which gives the sizes and locations of marinas in the estuarine system such that dissolved oxygen (DO) and FC water-quality standards are maintained. Five different estuarine development scenarios are considered. Each scenario is evaluated with respect to both maximum and uniform land development constraints. In addition, two alternative fecal coliform standards are used with each of the development options.

  18. Cumulative Impact of Marinas on Estuarine Water Quality

    PubMed

    McAllister; Overton; Brill

    1996-05-01

    The purpose of this work is to present a modeling approach for assessing and managing the cumulative impact of marinas on estuarine systems. In doing so, both a water-quality model and a planning and management model are developed. The water-quality model predicts biochemical oxygen demand (BOD) and fecal coliform (FC) loadings from marina sources in a hypothetical North Carolina estuary. By running the water-quality model repeatedly with varied loading input, impact coefficients are determined. These impact coefficients are used in the planning and management model, the output of which gives the sizes and locations of marinas in the estuarine system such that dissolved oxygen (DO) and FC water-quality standards are maintained.Five different estuarine development scenarios are considered. Each scenario is evaluated with respect to both maximum and uniform land development constraints. In addition, two alternative fecal coliform standards are used with each of the development options.

  19. Euzebyella marina sp. nov., isolated from seawater.

    PubMed

    Zhang, Yan-Jiao; Zhao, Jia-Rui; Zhang, Xi-Ying; Chen, Guo-Zhong; Zhou, Ming-Yang; Mo, Xu-Hua; He, Hai-Lun; Chen, Shiyong

    2017-04-01

    A Gram-stain-negative, aerobic, yellow-pigmented, non-flagellated, non-gliding, oxidase- and catalase-positive bacterium, designated CY01T, was isolated from seawater of the Yellow Sea. CY01T grew at 15-37 °C (optimum, 30 °C), pH 5-8 (optimum, 6.5-7.5) and with 0.5-12 % (w/v) NaCl (optimum, 0.5-3.5 %). It could not produce flexirubin-type pigment or reduce nitrate to nitrite. CY01T showed the highest 16S rRNA gene sequence similarity to the type strain of Euzebyella saccharophila (97.0 %) and clustered tightly with the species of the genus Euzebyella in the phylogenetic trees based on the 16S rRNA gene sequences. The major cellular fatty acids of CY01T were iso-C15 : 0, iso-C15 : 1G and iso-C17 : 0 3-OH and the major respiratory quinone was menaquinone MK-6. Polar lipids included phosphatidylethanolamine (PE), four unidentified lipids and one unidentified aminolipid. The genomic DNA G+C content was 38.2 mol%. Based on the results of the polyphasic characterization of CY01T, it represents a novel species of the genus Euzebyella, for which the name Euzebyella marina sp. nov. is proposed. The type strain is CY01T (=CCTCC AB 2014348T=KCTC 42440T).

  20. Grazing-activated chemical defence in a unicellular marine alga

    NASA Astrophysics Data System (ADS)

    Wolfe, Gordon V.; Steinke, Michael; Kirst, Gunter O.

    1997-06-01

    Marine plankton use a variety of defences against predators, some of which affect trophic structure and biogeochemistry. We have previously shown that, during grazing by the protozoan Oxyrrhis marina on the alga Emiliania huxleyi, dimethylsulphoniopropionate (DMSP) from the prey is converted to dimethyl sulphide (DMS) when lysis of ingested prey cells initiates mixing of algal DMSP and the enzyme DMSP lyase. Such a mechanism is similar to macrophyte defence reactions,. Here we show that this reaction deters protozoan herbivores, presumably through the production of highly concentrated acrylate, which has antimicrobial activity. Protozoan predators differ in their ability to ingest and survive on prey with high-activity DMSP lyase, but all grazers preferentially select strains with low enzyme activity when offered prey mixtures. This defence system involves investment in a chemical precursor, DMSP, which is not self-toxic and has other useful metabolic functions. We believe this is the first report of grazing-activated chemical defence in unicellular microorganisms.

  1. Anticoagulant effect of marine algae.

    PubMed

    Kim, Se-Kwon; Wijesekara, Isuru

    2011-01-01

    Recently, a great deal of interest has been developed in the nutraceutical and pharmaceutical industries to isolate natural anticoagulant compounds from marine resources. Among marine resources, marine algae are valuable sources of novel bioactive compounds with anticoagulant effect. Phlorotannins and sulfated polysaccharides such as fucoidans in brown algae, carrageenans in red algae, and ulvans in green algae have been recognized as potential anticoagulant agents. Therefore, marine algae-derived phlorotannins and SPs have great potential for developing as anticoagulant drugs in nutraceutical and pharmaceutical areas. This chapter focuses on the potential anticoagulant agents in marine algae and presents an overview of their anticoagulant effect. Copyright © 2011 Elsevier Inc. All rights reserved.

  2. Polynuclear aromatic hydrocarbons in oyster tissue around three coastal marinas

    SciTech Connect

    Marcus, J.M.; Stokes, T.P.

    1985-12-01

    Marinas present the potential for introduction of various pollutants into the surrounding waters such as coliform bacteria, primary pathogens, heavy metals, and petroleum hydrocarbons. Little data have been presented specifically addressing the effects of recreational marinas on petroleum hydrocarbon levels or, for that matter, other constituent levels in oysters near those marinas. In order to obtain such data, a comprehensive assessment of water and oyster quality around three coastal marinas was conducted by the South Carolina Department of Health and Environmental control (SCDHEC) during 1983. Polynuclear aromatic hydrocarbons (PAH) were selected as the petroleum hydrocarbon fraction of interest since they are mainly of pyrogenic origin; have been shown to be the most toxic/carcinogenic fraction of oil; have been shown to affect the respiration and heart rates of mussels; and have been shown to be linked to neoplasia in clams and proliferative disorders in mussels. C. virginica was chosen as the mollusc of interest because of its widespread distribution in the estuaries of South Carolina, its importance as an economic and recreational resource, and its suitability as a sentinel organism for monitoring coastal pollution.

  3. Splenic immunotoxicity in developing cane toads (Rhinella marina) from Bermuda.

    PubMed

    Fort, Douglas J; Mathis, Michael; Fort, Chelsea E; Fort, Hayley M; Fort, Troy D; Linzey, Donald W; Bacon, Jamie P

    2016-10-01

    The impacts of contaminated sediment from 2 ponds in Bermuda on immune function in newly metamorphosed cane toads were examined. In the present study, a partial life-cycle experiment exposing Gosner stage 20 cane toad tadpoles to pond sediment and laboratory culture water through metamorphosis and into a juvenile state was performed. A basic immunology battery, including general necropsy, spleen somatic index, spleen white pulp content, splenocyte tissue density, and splenocyte viability, was conducted in newly metamorphosed Rhinella marina exposed to Bermuda freshwater sediment and baseline specimens collected from 2 separate populations in south Texas and south Florida, USA. Immune function was evaluated using a lymphocyte proliferation assay with subset specimens infected with Mycobacterium chelonae. In the Bermuda population exposed to pond sediment, splenocyte tissue density was markedly lower and lymphocyte proliferation substantially less relative to cohorts exposed to control sediment and to the North American populations. Considerable increases in spleen weight and liver and spleen lesions related to M. chelonae infection were recorded in challenged Bermuda R. marina compared with unchallenged specimens. Overall, immune function in Bermuda R. marina was compromised compared with North American mainland R. marina regardless of treatment but more dramatically in specimens exposed to Bermuda pond sediments. Environ Toxicol Chem 2016;35:2604-2612. © 2016 SETAC. © 2016 SETAC.

  4. TOTAL AND BIOAVAILABLE METALS AT MARINA SEDIMENTS IN LAKE TEXOMA

    EPA Science Inventory

    Total and bioavailable metals in sediments were measured at marina areas in Lake Texoma during the fall of 2001. The metals most often found in the highest concentrations in sediments were Ca (56811 mg/kg) and Al (31095 mg/kg), followed by Fe (19393 mg/kg), K (6089 mg/kg), and Mg...

  5. 18 CFR 1304.404 - Commercial marina harbor limits.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 18 Conservation of Power and Water Resources 2 2012-04-01 2012-04-01 false Commercial marina harbor limits. 1304.404 Section 1304.404 Conservation of Power and Water Resources TENNESSEE VALLEY AUTHORITY APPROVAL OF CONSTRUCTION IN THE TENNESSEE RIVER SYSTEM AND REGULATION OF STRUCTURES AND OTHER...

  6. TOTAL AND BIOAVAILABLE METALS AT MARINA SEDIMENTS IN LAKE TEXOMA

    EPA Science Inventory

    Total and bioavailable metals in sediments were measured at marina areas in Lake Texoma during the fall of 2001. The metals most often found in the highest concentrations in sediments were Ca (56811 mg/kg) and Al (31095 mg/kg), followed by Fe (19393 mg/kg), K (6089 mg/kg), and Mg...

  7. An oxidative and salinity stress induced peroxisomal ascorbate peroxidase from Avicennia marina: molecular and functional characterization.

    PubMed

    Kavitha, Kumaresan; Venkataraman, Gayatri; Parida, Ajay

    2008-01-01

    APX (EC, 1.11.1.11) has a key role in scavenging ROS and in protecting cells against their toxic effects in algae and higher plants. A cDNA encoding a peroxisomal ascorbate peroxidase, Am-pAPX1, was isolated from salt stressed leaves of Avicennia marina (Forsk.) Vierh. by EST library screening and its expression in the context of various environmental stresses was investigated. Am-pAPX1 contains an ORF of 286 amino acids coding for a 31.4 kDa protein. The C-terminal region of the Am-pAPX1 ORF has a putative transmembrane domain and a peroxisomal targeting signal (RKKMK), suggesting peroxisomal localization. The peroxisomal localization of Am-pAPX1 was confirmed by stable transformation of the GFP-(Ala)(10)-Am-pAPX1 fusion in tobacco. RNA blot analysis revealed that Am-pAPX1 is expressed in response to salinity (NaCl) and oxidative stress (high intensity light, hydrogen peroxide application and excess iron). The isolated genomic clone of Am-pAPX1 was found to contain nine exons. A fragment of 1616bp corresponding to the 5' upstream region of Am-pAPX1 was isolated by TAIL-PCR. In silico analysis of this sequence reveals the presence of putative light and abiotic stress regulatory elements.

  8. Development of new efficient method for isolation of phenolics from sea algae prior to their rapid resolution liquid chromatographic-tandem mass spectrometric determination.

    PubMed

    Klejdus, Bořivoj; Plaza, Merichel; Šnóblová, Marie; Lojková, Lea

    2017-02-20

    The extraction of phenolic compounds from 4 different sea algae samples, three brown algae (Cystoseira abies-marina, C. abies-marina grinded under cryogenic conditions with liquid nitrogen, Undaria pinnatifida and Sargassum muticum) and one red algae (Chondrus crispus) via solid phase extraction using micro-elution solid-phase extraction (μ-SPE) plate method was studied. Prior to μ-SPE, 50mg of algae with 80% methanol mixture was extracted in hyphenated series by various extraction techniques, such as pressurized liquid extraction and Ika Ultra-Turrax(®) Tube Drive, in combination with ultrasound assisted extraction. The μ-SPE plate technique reduced the time of sample pre-treatment thanks to higher sensitivity and pre-concentration effect. Selected groups of benzoic acid derivatives (p-hydroxybenzoic, protocatechuic, gallic, vanillic, and syringic acids), hydroxybenzaldehydes (4-hydroxybenzaldehyde, and 3,4-dihydroxybenzaldehyde), and cinnamic acid derivatives (p-coumaric, caffeic, ferulic, sinapic, and chlorogenic acids) were determined using rapid resolution liquid chromatography coupled to mass spectrometry detection with negative ion electrospray ionization (RRLC-ESI-MS) using multiple reactions monitoring. LOQs of measured samples varied in the range 0.23-1.68ng/mL and LODs in the range 0.07-0.52ng/mL. The applied method allowed a simultaneous determination of phenolics (i.e. free, esters soluble in methanol, glycosides, and esters insoluble in methanol) in less than 5min (including alkaline or acidic hydrolysis of raw extracts) from sea algae extracts.

  9. Economic Impacts from Spending by Marina Slip Renters at Harry S. Truman Dam and Reservoir

    DTIC Science & Technology

    2008-02-01

    Raystown Lake , marina • Hartwell Lake , private dock • Lake Barkley, private dock • Lake Sidney Lanier, private dock and marina ERDC/EL TR-08-7 ix...and Development Center (ERDC) surveyed marina slip renters at Lake Sidney Lanier ( Georgia ), Raystown Lake (Pennsylvania), and Harry S. Truman Dam...are adjusted to 2004 dollars. The economic im- pacts estimated for Harry S. Truman Dam and Reservoir are useful for accountability purposes, lake

  10. Genomics of Volvocine Algae

    PubMed Central

    Umen, James G.; Olson, Bradley J.S.C.

    2015-01-01

    Volvocine algae are a group of chlorophytes that together comprise a unique model for evolutionary and developmental biology. The species Chlamydomonas reinhardtii and Volvox carteri represent extremes in morphological diversity within the Volvocine clade. Chlamydomonas is unicellular and reflects the ancestral state of the group, while Volvox is multicellular and has evolved numerous innovations including germ-soma differentiation, sexual dimorphism, and complex morphogenetic patterning. The Chlamydomonas genome sequence has shed light on several areas of eukaryotic cell biology, metabolism and evolution, while the Volvox genome sequence has enabled a comparison with Chlamydomonas that reveals some of the underlying changes that enabled its transition to multicellularity, but also underscores the subtlety of this transition. Many of the tools and resources are in place to further develop Volvocine algae as a model for evolutionary genomics. PMID:25883411

  11. 6. VIEW OF TOWN CENTER, MARINA VIEW TOWERS SOUTH BUILDING ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    6. VIEW OF TOWN CENTER, MARINA VIEW TOWERS SOUTH BUILDING (ORIGINALLY TOWN CENTER PLAZA WEST) AT 1000-1100 SIXTH STREET; TOWN CENTER PLAZA WEST WAS DESIGNED BY I.M. PEI & PARTNERS AND BUILT IN 1962 BY WEBB & KNAPP - Southwest Washington, Urban Renewal Area, Bounded by Independence Avenue, Washington Avenue, South Capitol Street, Canal Street, P Street, Maine Avenue & Washington Channel, Fourteenth Street, D Street, & Twelfth Street, Washington, District of Columbia, DC

  12. Anti-adipogenic and Pro-osteoblastogenic Activities of Spergularia marina Extract.

    PubMed

    Karadeniz, Fatih; Kim, Jung-Ae; Ahn, Byul-Nim; Kim, Mihyang; Kong, Chang-Suk

    2014-09-01

    For decades, Spergularia marina, a local food that is popular in South Korea, has been regarded as a nutritious source of amino acids, vitamins, and minerals. While several halophytes are reported to possess distinct bioactivities, S. marina has yet to be promoted as a natural source of bioactives. In this study, the effects of S. marina on the adipogenic differentiation of 3T3-L1 fibroblasts and the osteoblastic differentiation of MC3T3-E1 pre-osteoblasts and C2C12 myoblast cells were evaluated. The anti-adipogenic effect of S. marina was assessed by measuring lipid accumulation and adipogenic differentiation marker expression. S. marina treatment significantly reduced lipid accumulation and notably decreased the gene levels of peroxisome proliferator-activated receptor γ, CCAAT/enhancer-binding protein α, and sterol regulatory element binding protein 1c. In addition, S. marina enhanced osteoblast differentiation, as indicated by increased alkaline phosphatase activity and increased levels of osteoblastogenesis indicators, namely bone morphogenetic protein-2, osteocalcin, and type I collagen. In conclusion, S. marina could be a source of functional food ingredients that improve osteoporosis and obesity. Further studies, including activity-based fractionation, will elucidate the mechanism of action and active ingredients of S. marina, which would provide researchers with a better understanding of the nutraceutical and therapeutic applications of S. marina.

  13. Anti-adipogenic and Pro-osteoblastogenic Activities of Spergularia marina Extract

    PubMed Central

    Karadeniz, Fatih; Kim, Jung-Ae; Ahn, Byul-Nim; Kim, Mihyang; Kong, Chang-Suk

    2014-01-01

    For decades, Spergularia marina, a local food that is popular in South Korea, has been regarded as a nutritious source of amino acids, vitamins, and minerals. While several halophytes are reported to possess distinct bioactivities, S. marina has yet to be promoted as a natural source of bioactives. In this study, the effects of S. marina on the adipogenic differentiation of 3T3-L1 fibroblasts and the osteoblastic differentiation of MC3T3-E1 pre-osteoblasts and C2C12 myoblast cells were evaluated. The anti-adipogenic effect of S. marina was assessed by measuring lipid accumulation and adipogenic differentiation marker expression. S. marina treatment significantly reduced lipid accumulation and notably decreased the gene levels of peroxisome proliferator-activated receptor γ, CCAAT/enhancer-binding protein α, and sterol regulatory element binding protein 1c. In addition, S. marina enhanced osteoblast differentiation, as indicated by increased alkaline phosphatase activity and increased levels of osteoblastogenesis indicators, namely bone morphogenetic protein-2, osteocalcin, and type I collagen. In conclusion, S. marina could be a source of functional food ingredients that improve osteoporosis and obesity. Further studies, including activity-based fractionation, will elucidate the mechanism of action and active ingredients of S. marina, which would provide researchers with a better understanding of the nutraceutical and therapeutic applications of S. marina. PMID:25320716

  14. Fragility of Floating Docks for Small Craft Marinas

    NASA Astrophysics Data System (ADS)

    Keen, A.; Eskijian, M.; Lynett, P. J.; Ayca, A.

    2015-12-01

    Because of the damage resulting from the 2010 Chile and 2011 Japanese tele-tsunamis, damage to the small craft marinas in California has become an important concern. This paper will explain the methodology and results used to simulate the demand and also the structural capacity of the floating dock system, composed of floating docks, fingers and moored vessels during tsunami events. The intent is to develop a predictive tool to understand the vulnerability of California's small craft harbors to tsunami events. To validate the methodology, the probabilistic model will be applied to Santa Cruz Harbor. Maps of maximum velocity and mean current direction from the 2011 Japan tsunami have been developed using a numerical model. Cleat and pile guide locations will be recorded and georeferenced from aerial images before the event. The fragility curves for each dock/finger system will be compared with damage reports and aerial images from just after the tsunami event. A discussion of how the fragility curves compare with the damage reports will be included. It is anticipated that these curves will be useful to marina operators to use as a tool to determine where rehabilitation might be necessary to mitigate some of the damage from the next event. Conclusions will focus on how results can be used by marina operators to reduce harbor vulnerability to tsunamis.

  15. Heavy metals in oyster tissue around three coastal marinas

    SciTech Connect

    Marcus, J.M.; Thompson, A.M.

    1986-04-01

    The past decade has presented an unprecedented period of growth and development along the coastline of South Carolina. The majority of this development has been to serve the recreation and tourism industry and, as such, has included the construction of numerous recreational marinas in the coastal waters of the State. Various plans have been presented for the siting of marinas in pristine estuarine waters. This has raised much concern due to the possible impacts of such development on the plentiful oyster resource found in those waters. Marinas present the potential for the introduction of pollutants such as heavy metals into the surrounding waters. This investigation was conducted by the South Carolina Department of Health and Environmental Control (SCDHEC) during 1983, and yielded a multifaceted data base composed of physiocochemical and bacteriological analyses from water, chemical analyses from sediment and chemical/bacteriological physiological analyses from the American oyster, Crassostrea virginica (Gmelin). C. virginica was chosen as the organism of interest due to its wide distribution in the estuaries of South Carolina, its importance as an economic and recreational resource and its suitability as a sentinel organism for monitoring coastal pollution.

  16. Development of approaches to predict the distribution of Zostera marina and Z. japonica in Pacific Northwest estuaries

    EPA Science Inventory

    The dominant species of submerged aquatic vegetation (SAV) in Pacific Northwest (PNW) estuaries is the intertidal and shallow subtidal seagrass, Zostera marina. Beds of Z. marina constitute a critical habitat, including providing habitat for juvenile salmon. Additionally, the n...

  17. Development of approaches to predict the distribution of Zostera marina and Z. japonica in Pacific Northwest estuaries

    EPA Science Inventory

    The dominant species of submerged aquatic vegetation (SAV) in Pacific Northwest (PNW) estuaries is the intertidal and shallow subtidal seagrass, Zostera marina. Beds of Z. marina constitute a critical habitat, including providing habitat for juvenile salmon. Additionally, the n...

  18. Comparative toxicity of new halophenolic DBPs in chlorinated saline wastewater effluents against a marine alga: halophenolic DBPs are generally more toxic than haloaliphatic ones.

    PubMed

    Liu, Jiaqi; Zhang, Xiangru

    2014-11-15

    Using seawater for toilet flushing effectively reduces the consumption of precious freshwater resources, yet it introduces bromide and iodide ions into a wastewater treatment system, which may form bromo- and iodo-disinfection byproducts (DBPs) during chlorination of the wastewater effluent. Most of the newly identified DBPs in chlorinated wastewater effluents were halophenolic compounds. It has been reported that the newly identified bromo- and iodo-phenolic DBPs were generally significantly more toxic to a heterotrophic marine polychaete than the commonly known haloacetic acids and trihalomethanes. This has raised a concern over the discharge of chlorinated saline wastewater effluents into the marine ecosystem. In this study, the toxicity of new halophenolic DBPs and some haloaliphatic DBPs was tested against an autotrophic marine alga, Tetraselmis marina. The alga and polychaete bioassays gave the same toxicity orders for many groups of halo-DBPs. New halophenolic DBPs also showed significantly higher toxicity to the alga than the commonly known haloacetic acids, indicating that the emerging halophenolic DBPs deserve more attention. However, two bioassays did exhibit a couple of disparities in toxicity results, mainly because the alga was capable of metabolizing some (nitrogenous) halophenolic DBPs. A quantitative structure-toxicity relationship was developed for the halophenolic DBPs, by employing three physicochemical descriptors (log K(ow), pKa and molar topological index). This relationship presented the toxicity mechanism of the halophenolic DBPs to T. marina and gave a good prediction of the algal toxicity of the tested halophenolic DBPs. Copyright © 2014 Elsevier Ltd. All rights reserved.

  19. Regenerated extracellular NH4 (+) affects the motile chemosensory responses of batch-cultured Oxyrrhis marina.

    PubMed

    Martel, Claire M

    2010-04-01

    Regenerated extracellular NH4 (+)in laboratory batch cultures of the heterotrophic marine microzooplankter Oxyrrhis marina affects the strength and consistency of chemotaxes elicited by synthetic and biogenic chemoattractants. The ecological relevance of experiments with batch-cultured O. marina and limitations of the microcapillary assay for the study of chemosensory behaviours are discussed.

  20. Sensitivity to chilling temperatures and distribution differ in the mangrove species Kandelia candel and Avicennia marina.

    PubMed

    Kao, Wen-Yuan; Shih, Chen-Ning; Tsai, Tyng-Tyng

    2004-07-01

    We compared the effects of short-term (hours) and long-term (days) exposure to chilling temperatures on the photosynthetic gas exchange, leaf characteristics and chlorophyll a fluorescence of seedlings of the mangrove species Kandelia candel Druce and Avicennia marina (Forsk.) Vierh. Both species occur along the west coast of Taiwan, but K. candel occurs further north than A. marina. We hypothesized that temperature was one of the major environmental factors limiting the northern distribution of A. marina. Avicennia marina was more sensitive to chilling temperatures than K. candel. Leaves of both species showed reductions in light-saturated photosynthetic rates (Amax), stomatal conductance (gs) and quantum yield of photosystem II after a 1-h exposure to 15 degrees C, with A. marina showing significantly greater reductions in Amax and gs than K. candel. No significant differences in Amax, gs and electron transport rate (ETR) were found between leaves of K. candel grown at 15 and 30 degrees C for 10 days. However, leaves of A. marina grown for 10 days at 15 degrees C had significantly lower Amax, gs and ETR than plants grown at 30 degrees C. After 20 days at 15 degrees C, leaf mass per area of both species was increased significantly, whereas area-based chlorophyll concentrations were reduced, with significantly greater changes in A. marina than in K. candel. We concluded that sensitivity to low winter temperatures is a primary limiting factor in the distribution of A. marina along the western coast of Taiwan. Copyright 2004 Heron Publishing

  1. Comparison of photosynthetic characteristics of the seagrasscongeners Zostera marina L. and Zostera japonica Ascher. & Graeb.

    EPA Science Inventory

    On the Pacific coast of North America two seagrass species in the genus Zostera co-exist; the native species Zostera marina, and an introduced species, Z. japonica. These two species typically occupy separate habitat niches, with Z. marina occupying the lower intertidal and shal...

  2. 18 CFR 1304.403 - Marina sewage pump-out stations and holding tanks.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 18 Conservation of Power and Water Resources 2 2011-04-01 2011-04-01 false Marina sewage pump-out stations and holding tanks. 1304.403 Section 1304.403 Conservation of Power and Water Resources TENNESSEE... OTHER ALTERATIONS Miscellaneous § 1304.403 Marina sewage pump-out stations and holding tanks. All...

  3. 18 CFR 1304.403 - Marina sewage pump-out stations and holding tanks.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 18 Conservation of Power and Water Resources 2 2010-04-01 2010-04-01 false Marina sewage pump-out stations and holding tanks. 1304.403 Section 1304.403 Conservation of Power and Water Resources TENNESSEE... OTHER ALTERATIONS Miscellaneous § 1304.403 Marina sewage pump-out stations and holding tanks. All...

  4. Comparison of photosynthetic characteristics of the seagrasscongeners Zostera marina L. and Zostera japonica Ascher. & Graeb.

    EPA Science Inventory

    On the Pacific coast of North America two seagrass species in the genus Zostera co-exist; the native species Zostera marina, and an introduced species, Z. japonica. These two species typically occupy separate habitat niches, with Z. marina occupying the lower intertidal and shal...

  5. 76 FR 37650 - Safety Zone; 4th of July Festival Berkeley Marina Fireworks Display Berkeley, CA

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-28

    ... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; 4th of July Festival Berkeley Marina Fireworks Display Berkeley, CA AGENCY: Coast Guard, DHS. ACTION: Temporary final rule. SUMMARY: The Coast... Berkeley Pier, Berkeley, CA in support of the 4th of July Festival Berkeley Marina Fireworks...

  6. Miocene Coralline algae

    SciTech Connect

    Bosence, D.W.J.

    1988-01-01

    The coralline algae (Order Corallinales) were sedimentologically and ecologically important during the Miocene, a period when they were particularly abundant. The many poorly described and illustrated species and the lack of quantitative data in coralline thalli make specific determinations particularly difficult, but some species are well known and widespread in the Tethyan area. The sedimentologic importance of the Miocene coralline algae is reflected in the abundance of in-situ coralline buildups, rhodoliths, and coralline debris facies at Malta and Spain; similar sequences are known throughout the Tethyan Miocene. In-situ buildups vary from leafy crustose biostromes to walled reefs with dense coralline crusts and branches. Growth forms are apparently related to hydraulic energy. Rhodoliths vary from leafy, crustose, and open-branched forms in muddy sediments to dense, crustose, and radial-branching forms in coarse grainstones. Rhodolith form and internal structure correlate closely with hydraulic energy. Coralline genera are conservative and, as such, are useful in paleoenvironmental analysis. Of particular interest are the restricted depth ranges of recent coralline genera. More research is needed on the sedimentology, paleoecology, and systematics of the Cenozoic corallines, as they have particular value in paleoenvironmental analysis.

  7. Giant viruses infecting algae.

    PubMed

    Van Etten, J L; Meints, R H

    1999-01-01

    Paramecium bursaria chlorella virus (PBCV-1) is the prototype of a family of large, icosahedral, plaque-forming, double-stranded-DNA-containing viruses that replicate in certain unicellular, eukaryotic chlorella-like green algae. DNA sequence analysis of its 330, 742-bp genome leads to the prediction that this phycodnavirus has 376 protein-encoding genes and 10 transfer RNA genes. The predicted gene products of approximately 40% of these genes resemble proteins of known function. The chlorella viruses have other features that distinguish them from most viruses, in addition to their large genome size. These features include the following: (a) The viruses encode multiple DNA methyltransferases and DNA site-specific endonucleases; (b) PBCV-1 encodes at least part, if not the entire machinery to glycosylate its proteins; (c) PBCV-1 has at least two types of introns--a self-splicing intron in a transcription factor-like gene and a splicesomal processed type of intron in its DNA polymerase gene. Unlike the chlorella viruses, large double-stranded-DNA-containing viruses that infect marine, filamentous brown algae have a circular genome and a lysogenic phase in their life cycle.

  8. The protozoa dinoflagellate Oxyrrhis marina contains selenoproteins and the relevant translation apparatus.

    PubMed

    Osaka, Takashi; Beika, Asa; Hattori, Asuka; Kohno, Yoshinori; Kato, Koichi H; Mizutani, Takaharu

    2003-01-03

    In the phylogenetic tree, selenoproteins and the corresponding translation machinery are found in Archaea, Eubacteria, and animals, but not in fungi and higher plants. As very little is known about Protozoa, we searched for the presence of selenoproteins in the primitive dinoflagellate Oxyrrhis marina, belonging to the Protoctista kingdom. Four selenoproteins could be obtained from O. marina cells cultured in the presence of 75Se. Using O. marina or bovine liver cytosolic extracts, we could serylate and selenylate in vitro total O. marina tRNAs. Moreover, the existence of a tRNA(Sec) could be deduced from in vivo experiments. Lastly, an anti-serum against the specialized mammalian translation elongation factor mSelB reacted with a protein of 48-kDa molecular mass. Altogether, our data showed that O. marina contains selenoproteins and suggests that the corresponding translation machinery is related to that found in animals.

  9. Role of commercial harbours and recreational marinas in the spread of non-indigenous fouling species.

    PubMed

    Ferrario, Jasmine; Caronni, Sarah; Occhipinti-Ambrogi, Anna; Marchini, Agnese

    2017-09-01

    The role of commercial harbours as sink and source habitats for non-indigenous species (NIS) and the role of recreational boating for their secondary spread were investigated by analysing the fouling community of five Italian harbours and five marinas in the western Mediterranean Sea. It was first hypothesised that NIS assemblages in the recreational marinas were subsets of those occurring in commercial harbours. However, the data did not consistently support this hypothesis: the NIS pools of some marinas significantly diverged from harbours even belonging to the same coastal stretches, including NIS occurring only in marinas. This study confirms harbours as hotspots for marine NIS, but also reveals that numbers of NIS in some marinas is higher than expected, suggesting that recreational vessels effectively facilitate NIS spread. It is recommended that this vector of NIS introduction is taken into account in the future planning of sustainable development of maritime tourism in Europe.

  10. Cellular Auxin Transport in Algae

    PubMed Central

    Zhang, Suyun; van Duijn, Bert

    2014-01-01

    The phytohormone auxin is one of the main directors of plant growth and development. In higher plants, auxin is generated in apical plant parts and transported from cell-to-cell in a polar fashion. Auxin is present in all plant phyla, and the existence of polar auxin transport (PAT) is well established in land plants. Algae are a group of relatively simple, autotrophic, photosynthetic organisms that share many features with land plants. In particular, Charophyceae (a taxon of green algae) are closest ancestors of land plants. In the study of auxin function, transport and its evolution, the algae form an interesting research target. Recently, proof for polar auxin transport in Chara species was published and auxin related research in algae gained more attention. In this review we discuss auxin transport in algae with respect to land plants and suggest directions for future studies. PMID:27135491

  11. Cellular Auxin Transport in Algae.

    PubMed

    Zhang, Suyun; van Duijn, Bert

    2014-01-27

    The phytohormone auxin is one of the main directors of plant growth and development. In higher plants, auxin is generated in apical plant parts and transported from cell-to-cell in a polar fashion. Auxin is present in all plant phyla, and the existence of polar auxin transport (PAT) is well established in land plants. Algae are a group of relatively simple, autotrophic, photosynthetic organisms that share many features with land plants. In particular, Charophyceae (a taxon of green algae) are closest ancestors of land plants. In the study of auxin function, transport and its evolution, the algae form an interesting research target. Recently, proof for polar auxin transport in Chara species was published and auxin related research in algae gained more attention. In this review we discuss auxin transport in algae with respect to land plants and suggest directions for future studies.

  12. Blue carbon stocks in Baltic Sea eelgrass (Zostera marina) meadows

    NASA Astrophysics Data System (ADS)

    Röhr, Maria Emilia; Boström, Christoffer; Canal-Vergés, Paula; Holmer, Marianne

    2016-11-01

    Although seagrasses cover only a minor fraction of the ocean seafloor, their carbon sink capacity accounts for nearly one-fifth of the total oceanic carbon burial and thus play a critical structural and functional role in many coastal ecosystems. We sampled 10 eelgrass (Zostera marina) meadows in Finland and 10 in Denmark to explore seagrass carbon stocks (Corg stock) and carbon accumulation rates (Corg accumulation) in the Baltic Sea area. The study sites represent a gradient from sheltered to exposed locations in both regions to reflect expected minimum and maximum stocks and accumulation. The Corg stock integrated over the top 25 cm of the sediment averaged 627 g C m-2 in Finland, while in Denmark the average Corg stock was over 6 times higher (4324 g C m-2). A conservative estimate of the total organic carbon pool in the regions ranged between 6.98 and 44.9 t C ha-1. Our results suggest that the Finnish eelgrass meadows are minor carbon sinks compared to the Danish meadows, and that majority of the Corg produced in the Finnish meadows is exported. Our analysis further showed that > 40 % of the variation in the Corg stocks was explained by sediment characteristics, i.e. dry density, porosity and silt content. In addition, our analysis show that the root : shoot ratio of Z. marina explained > 12 % and the contribution of Z. marina detritus to the sediment surface Corg pool explained > 10 % of the variation in the Corg stocks. The mean monetary value for the present carbon storage and carbon sink capacity of eelgrass meadows in Finland and Denmark, were 281 and 1809 EUR ha-1, respectively. For a more comprehensive picture of seagrass carbon storage capacity, we conclude that future blue carbon studies should, in a more integrative way, investigate the interactions between sediment biogeochemistry, seascape structure, plant species architecture and the hydrodynamic regime.

  13. A mutualistic interaction between the bacterium Pseudomonas asplenii and the harmful algal species Chattonella marina (Raphidophyceae).

    PubMed

    Park, Bum Soo; Joo, Jae-Hyoung; Baek, Kyung-Duck; Han, Myung-Soo

    2016-06-01

    Several studies on various Chattonella species have reported that bacteria may play an important role in Chattonella bloom initiation, however, no studies have described how these bacteria promote the growth of C. marina. The interaction between C. marina and bacteria was investigated for identification and characterization of potential growth-promoting bacteria. In preliminary tests, the growth promoting effect of Pseudomonas species (25 strains) was investigated and P. asplenii (≥2.27) was determined as a growth-promoting bacteria for both C. marina strains (CCMP 2049 and 2050). This bacterium exerted optimal growth-promoting effects on C. marina, causing an increase in the initial density of P. asplenii to approximately 1×10(7)cellsmL(-1), which was used as the initial density in this study. To determine whether the growth-promoting activity was direct or indirect, P. asplenii was incubated in the algal media and then a filtrate of this culture was added to both C. marina strains. The P. asplenii filtrate stimulated the growth of C. marina and maintained the growth-promoting effects after high temperature (121°C for 20min) and pressure (15psi) treatment. Thus, P. asplenii is able to promote C. marina growth through the release of a heat-resistant substance, such as inorganic nutrients. A nutrient analysis indicated that this bacterium elevated the phosphate concentration. Interestingly, P. asplenii was unable to survive in phosphate-limited media but could grow in phosphate-limited media incubating C. marina. Moreover, this bacterium could secrete significantly more phosphate in the presence of C. marina (p<0.0001). These results suggested that P. asplenii and C. marina may have a mutualistic interaction. Copyright © 2016 Elsevier B.V. All rights reserved.

  14. Temporal shifts in top-down vs. bottom-up control of epiphytic algae in a seagrass ecosystem

    USGS Publications Warehouse

    Whalen, Matthew A.; Duffy, J. Emmett; Grace, James B.

    2013-01-01

    In coastal marine food webs, small invertebrate herbivores (mesograzers) have long been hypothesized to occupy an important position facilitating dominance of habitat-forming macrophytes by grazing competitively superior epiphytic algae. Because of the difficulty of manipulating mesograzers in the field, however, their impacts on community organization have rarely been rigorously documented. Understanding mesograzer impacts has taken on increased urgency in seagrass systems due to declines in seagrasses globally, caused in part by widespread eutrophication favoring seagrass overgrowth by faster-growing algae. Using cage-free field experiments in two seasons (fall and summer), we present experimental confirmation that mesograzer reduction and nutrients can promote blooms of epiphytic algae growing on eelgrass (Zostera marina). In this study, nutrient additions increased epiphytes only in the fall following natural decline of mesograzers. In the summer, experimental mesograzer reduction stimulated a 447% increase in epiphytes, appearing to exacerbate seasonal dieback of eelgrass. Using structural equation modeling, we illuminate the temporal dynamics of complex interactions between macrophytes, mesograzers, and epiphytes in the summer experiment. An unexpected result emerged from investigating the interaction network: drift macroalgae indirectly reduced epiphytes by providing structure for mesograzers, suggesting that the net effect of macroalgae on seagrass depends on macroalgal density. Our results show that mesograzers can control proliferation of epiphytic algae, that top-down and bottom-up forcing are temporally variable, and that the presence of macroalgae can strengthen top-down control of epiphytic algae, potentially contributing to eelgrass persistence.

  15. Temporal shifts in top-down vs. bottom-up control of epiphytic algae in a seagrass ecosystem.

    PubMed

    Whalen, Matthew A; Duffy, J Emmett; Grace, James B

    2013-02-01

    In coastal marine food webs, small invertebrate herbivores (mesograzers) have long been hypothesized to occupy an important position facilitating dominance of habitat-forming macrophytes by grazing competitively superior epiphytic algae. Because of the difficulty of manipulating mesograzers in the field, however, their impacts on community organization have rarely been rigorously documented. Understanding mesograzer impacts has taken on increased urgency in seagrass systems due to declines in seagrasses globally, caused in part by widespread eutrophication favoring seagrass overgrowth by faster-growing algae. Using cage-free field experiments in two seasons (fall and summer), we present experimental confirmation that mesograzer reduction and nutrients can promote blooms of epiphytic algae growing on eelgrass (Zostera marina). In this study, nutrient additions increased epiphytes only in the fall following natural decline of mesograzers. In the summer, experimental mesograzer reduction stimulated a 447% increase in epiphytes, appearing to exacerbate seasonal dieback of eelgrass. Using structural equation modeling, we illuminate the temporal dynamics of complex interactions between macrophytes, mesograzers, and epiphytes in the summer experiment. An unexpected result emerged from investigating the interaction network: drift macroalgae indirectly reduced epiphytes by providing structure for mesograzers, suggesting that the net effect of macroalgae on seagrass depends on macroalgal density. Our results show that mesograzers can control proliferation of epiphytic algae, that top-down and bottom-up forcing are temporally variable, and that the presence of macroalgae can strengthen top-down control of epiphytic algae, potentially contributing to eelgrass persistence.

  16. Ecology of Harmful Algae

    NASA Astrophysics Data System (ADS)

    Roelke, Daniel L.

    2007-07-01

    Edna Graneli and Jefferson T. Turner, Editors;Ecological Studies Series, Vol. 189; Springer; ISBN 3540322094; 413 pp.; 2006; $195 Harmful algal blooms (HABs) affect commercially and recreationally important species, human health, and ecosystem functioning. Hallmark events are the visually stunning blooms where waters are discolored and filled with ichthyotoxin-producing algae that lead to large fish kills. Of most concern, however, are HABs that pose a threat to human health. For example, some phycotoxins bioaccumulate in the guts and tissues of commercially and recreationally important species that when consumed by humans, may result in nausea, paralysis, memory loss, and even death. In addition to the deleterious impacts of phycotoxins, HABs can be problematic in other ways. For example, the decay of blooms often leads to low dissolved oxygen in subsurface waters. Blooms also reduce light penetration into the water column. Both processes disrupt ecosystems and in some cases have completely destroyed benthic communities.

  17. Sulfide Intrusion and Detoxification in the Seagrass Zostera marina.

    PubMed

    Hasler-Sheetal, Harald; Holmer, Marianne

    2015-01-01

    Gaseous sulfide intrusion into seagrasses growing in sulfidic sediments causes little or no harm to the plant, indicating the presence of an unknown sulfide tolerance or detoxification mechanism. We assessed such mechanism in the seagrass Zostera marina in the laboratory and in the field with scanning electron microscopy coupled to energy dispersive X-ray spectroscopy, chromatographic and spectrophotometric methods, and stable isotope tracing coupled with a mass balance of sulfur compounds. We found that Z. marina detoxified gaseous sediment-derived sulfide through incorporation and that most of the detoxification occurred in underground tissues, where sulfide intrusion was greatest. Elemental sulfur was a major detoxification compound, precipitating on the inner wall of the aerenchyma of underground tissues. Sulfide was metabolized into thiols and entered the plant sulfur metabolism as well as being stored as sulfate throughout the plant. We conclude that avoidance of sulfide exposure by reoxidation of sulfide in the rhizosphere or aerenchyma and tolerance of sulfide intrusion by incorporation of sulfur in the plant are likely major survival strategies of seagrasses in sulfidic sediments.

  18. Reconstructing Contaminant Deposition in a San Francisco Bay Marina, California

    PubMed Central

    Love, Adam H.; Esser, Bradley K.; Hunt, James R.

    2010-01-01

    Two sediment cores were collected from a marina in the San Francisco Bay to characterize historical sediment contamination resulting from the direct discharge of industrial wastewater from Naval Air Station Alameda. Depth profiles of trace metals, petroleum hydrocarbons, and radionuclides were determined with a 12-cm spacing down to a depth of 120 cm. The chronology of sediment accumulation is established by depth profiles of sedimentary time markers in conjunction with information on site history. The traditional approach of determining sediment accumulation rates by measuring atmospheric 210Pb deposition was obscured by a larger source of 210Pb in the sediments from the decay of anthropogenic 226Ra, likely from luminescent paints used at this facility and released to the marina. The sedimentation rates inferred from the data indicate that the greatest amount of contamination by trace metals and petroleum hydrocarbons took place between 1940 and 1960. In addition, anthropogenic 226Ra activities are positively correlated with some of the contaminants in the sediments, allowing the wastewater discharged from the facility to be distinguished from baywide contamination. In locations such as this, where there is a complex history of contaminant deposition, a source-specific tracer may be the only feasible method of attributing historical contamination to a point source. PMID:20333267

  19. Sulfide Intrusion and Detoxification in the Seagrass Zostera marina

    PubMed Central

    Hasler-Sheetal, Harald; Holmer, Marianne

    2015-01-01

    Gaseous sulfide intrusion into seagrasses growing in sulfidic sediments causes little or no harm to the plant, indicating the presence of an unknown sulfide tolerance or detoxification mechanism. We assessed such mechanism in the seagrass Zostera marina in the laboratory and in the field with scanning electron microscopy coupled to energy dispersive X-ray spectroscopy, chromatographic and spectrophotometric methods, and stable isotope tracing coupled with a mass balance of sulfur compounds. We found that Z. marina detoxified gaseous sediment-derived sulfide through incorporation and that most of the detoxification occurred in underground tissues, where sulfide intrusion was greatest. Elemental sulfur was a major detoxification compound, precipitating on the inner wall of the aerenchyma of underground tissues. Sulfide was metabolized into thiols and entered the plant sulfur metabolism as well as being stored as sulfate throughout the plant. We conclude that avoidance of sulfide exposure by reoxidation of sulfide in the rhizosphere or aerenchyma and tolerance of sulfide intrusion by incorporation of sulfur in the plant are likely major survival strategies of seagrasses in sulfidic sediments. PMID:26030258

  20. Fuel From Algae: Scaling and Commercialization of Algae Harvesting Technologies

    SciTech Connect

    2010-01-15

    Broad Funding Opportunity Announcement Project: Led by CEO Ross Youngs, AVS has patented a cost-effective dewatering technology that separates micro-solids (algae) from water. Separating micro-solids from water traditionally requires a centrifuge, which uses significant energy to spin the water mass and force materials of different densities to separate from one another. In a comparative analysis, dewatering 1 ton of algae in a centrifuge costs around $3,400. AVS’s Solid-Liquid Separation (SLS) system is less energy-intensive and less expensive, costing $1.92 to process 1 ton of algae. The SLS technology uses capillary dewatering with filter media to gently facilitate water separation, leaving behind dewatered algae which can then be used as a source for biofuels and bio-products. The biomimicry of the SLS technology emulates the way plants absorb and spread water to their capillaries.

  1. [From algae to "functional foods"].

    PubMed

    Vadalà, M; Palmieri, B

    2015-01-01

    In the recent years, a growing interest for nutraceutical algae (tablets, capsules, drops) has been developed, due to their effective health benefits, as a potential alternative to the classic drugs. This review explores the use of cyanobacterium Spirulina, the microalgae Chlorella, Dunaliella, Haematococcus, and the macroalgae Klamath, Ascophyllum, Lithothamnion, Chondrus, Hundaria, Glacilaria, Laminaria, Asparagopsis, Eisenia, Sargassum as nutraceuticals and dietary supplements, in terms of production, nutritional components and evidence-based health benefits. Thus, our specific goals are: 1) Overview of the algae species currently used in nutraceuticals; 2) Description of their characteristics, action mechanisms, and possible side effects; 3) Perspective of specific algae clinical investigations development.

  2. Neuroprotective effects of marine algae.

    PubMed

    Pangestuti, Ratih; Kim, Se-Kwon

    2011-01-01

    The marine environment is known as a rich source of chemical structures with numerous beneficial health effects. Among marine organisms, marine algae have been identified as an under-exploited plant resource, although they have long been recognized as valuable sources of structurally diverse bioactive compounds. Presently, several lines of studies have provided insight into biological activities and neuroprotective effects of marine algae including antioxidant, anti-neuroinflammatory, cholinesterase inhibitory activity and the inhibition of neuronal death. Hence, marine algae have great potential to be used for neuroprotection as part of pharmaceuticals, nutraceuticals and functional foods. This contribution presents an overview of marine algal neuroprotective effects and their potential application in neuroprotection.

  3. Transgenic algae engineered for higher performance

    DOEpatents

    Unkefer, Pat J; Anderson, Penelope S; Knight, Thomas J

    2014-10-21

    The present disclosure relates to transgenic algae having increased growth characteristics, and methods of increasing growth characteristics of algae. In particular, the disclosure relates to transgenic algae comprising a glutamine phenylpyruvate transaminase transgene and to transgenic algae comprising a glutamine phenylpyruvate transaminase transgene and a glutamine synthetase.

  4. Influence of neighboring plants on shading stress resistance and recovery of eelgrass, Zostera marina L.

    PubMed

    Gustafsson, Camilla; Boström, Christoffer

    2013-01-01

    Stressful environments may enhance the occurrence of facilitative interspecific interactions between plants. In several regions, Zostera marina occurs in mixed assemblages. However, the potential effects of plant diversity on stress responses and stability properties of Z. marina are poorly understood. We investigated the resistance and recovery of Z. marina subjected to shading (1 mo) in a field experiment lasting 2.5 mo. We shaded Z. marina planted in mono- and polycultures (Potamogeton perfoliatus, P. pectinatus, P. filiformis) in a factorial design (Shading×Richness) at 2 m depth. We estimated the resistance and recovery of Z. marina by measuring four response variables. Polyculture Z. marina lost proportionally less biomass than monocultures, thus having a greater resistance to shading. In contrast, after a 1 mo recovery period, monocultures exhibited higher biomass gain, and a faster recovery than polycultures. Our results suggest that plant species richness enhances the resistance of Z. marina through facilitative mechanisms, while the faster recovery in monocultures is possibly due to interspecific competition. Our results highlight the need of a much better understanding of the effects of interspecific interactions on ecosystem processes in mixed seagrass meadows, and the preservation of diverse plant assemblages to maintain ecosystem functioning.

  5. Simultaneous measurements of H+ and O2 fluxes in Zostera marina and its physiological implications.

    PubMed

    Lin, A-Peng; Wang, Guang-Ce; Zhou, Wen-Qin

    2013-08-01

    Zostera marina (eelgrass) is an important ecological component of many shallow, temperate lagoons. Evidence suggests that Z. marina has a high bicarbonate utilization capability, which could be promoted by possible proton extrusion and the consequent formation of an 'acid zone' in the apoplastic space (unstirred layer) of its leaves. It has been found that 50 mM of the buffer Tris significantly inhibited the photosynthetic O(2) evolution of Z. marina and it was proposed that this was because of Tris's ability to bond with protons outside the cell wall. To investigate if H(+) played an important role in the photosynthetic carbon utilization of Z. marina, it is very important to simultaneously monitor the photosynthesis status and possible H(+) fluxes. However, probably because of the lack of suitable techniques, this has never been attempted. In this study, experiments were undertaken on Z. marina by monitoring H(+) and O(2) fluxes and the relative electron transport rates during light-dark transition. During stable photosynthesis, in addition to an obvious O(2) outflow, there was a significant net H(+) influx connected to Z. marina photosynthesis. The inhibitory effects of both Tris and respiration inhibitors on apparent O(2) evolution of Z. marina were confirmed. However, evidence did not support the proposed Tris inhibition mechanism.

  6. Seagrasses are negatively affected by organic matter loading and Arenicola marina activity in a laboratory experiment.

    PubMed

    Govers, Laura L; Pieck, Timon; Bouma, Tjeerd J; Suykerbuyk, Wouter; Smolders, Alfons J P; van Katwijk, Marieke M

    2014-06-01

    When two ecosystem engineers share the same natural environment, the outcome of their interaction will be unclear if they have contrasting habitat-modifying effects (e.g., sediment stabilization vs. sediment destabilization). The outcome of the interaction may depend on local environmental conditions such as season or sediment type, which may affect the extent and type of habitat modification by the ecosystem engineers involved. We mechanistically studied the interaction between the sediment-stabilizing seagrass Zostera noltii and the bioturbating and sediment-destabilizing lugworm Arenicola marina, which sometimes co-occur for prolonged periods. We investigated (1) if the negative sediment destabilization effect of A. marina on Z. noltii might be counteracted by positive biogeochemical effects of bioirrigation (burrow flushing) by A. marina in sulfide-rich sediments, and (2) if previously observed nutrient release by A. marina bioirrigation could affect seagrasses. We tested the individual and combined effects of A. marina presence and high porewater sulfide concentrations (induced by organic matter addition) on seagrass biomass in a full factorial lab experiment. Contrary to our expectations, we did not find an effect of A. marina on porewater sulfide concentrations. A. marina activities affected the seagrass physically as well as by pumping nutrients, mainly ammonium and phosphate, from the porewater to the surface water, which promoted epiphyte growth on seagrass leaves in our experimental set-up. We conclude that A. marina bioirrigation did not alleviate sulfide stress to seagrasses. Instead, we found synergistic negative effects of the presence of A. marina and high sediment sulfide levels on seagrass biomass.

  7. Algae fuel clean electricity generation

    SciTech Connect

    O'Sullivan, D.

    1993-02-08

    The paper describes plans for a 600-kW pilot generating unit, fueled by diesel and Chlorella, a green alga commonly seen growing on the surface of ponds. The plant contains Biocoil units in which Chlorella are grown using the liquid effluents from sewage treatment plants and dissolved carbon dioxide from exhaust gases from the combustion unit. The algae are partially dried and fed into the combustor where diesel fuel is used to maintain ignition. Diesel fuel is also used for start-up and as a backup fuel for seasonal shifts that affect the algae growing conditions. Since the algae use the carbon dioxide emitted during the combustion process, the process will not contribute to global warming.

  8. Biological importance of marine algae.

    PubMed

    El Gamal, Ali A

    2010-01-01

    Marine organisms are potentially prolific sources of highly bioactive secondary metabolites that might represent useful leads in the development of new pharmaceutical agents. Algae can be classified into two main groups; first one is the microalgae, which includes blue green algae, dinoflagellates, bacillariophyta (diatoms)… etc., and second one is macroalgae (seaweeds) which includes green, brown and red algae. The microalgae phyla have been recognized to provide chemical and pharmacological novelty and diversity. Moreover, microalgae are considered as the actual producers of some highly bioactive compounds found in marine resources. Red algae are considered as the most important source of many biologically active metabolites in comparison to other algal classes. Seaweeds are used for great number of application by man. The principal use of seaweeds as a source of human food and as a source of gums (phycocollides). Phycocolloides like agar agar, alginic acid and carrageenan are primarily constituents of brown and red algal cell walls and are widely used in industry.

  9. Logistic analysis of algae cultivation.

    PubMed

    Slegers, P M; Leduc, S; Wijffels, R H; van Straten, G; van Boxtel, A J B

    2015-03-01

    Energy requirements for resource transport of algae cultivation are unknown. This work describes the quantitative analysis of energy requirements for water and CO2 transport. Algae cultivation models were combined with the quantitative logistic decision model 'BeWhere' for the regions Benelux (Northwest Europe), southern France and Sahara. For photobioreactors, the energy consumed for transport of water and CO2 turns out to be a small percentage of the energy contained in the algae biomass (0.1-3.6%). For raceway ponds the share for transport is higher (0.7-38.5%). The energy consumption for transport is the lowest in the Benelux due to good availability of both water and CO2. Analysing transport logistics is still important, despite the low energy consumption for transport. The results demonstrate that resource requirements, resource distribution and availability and transport networks have a profound effect on the location choices for algae cultivation.

  10. Factors Affecting Trophic Control of Community Structure and Ecosystem Functioning in Experimental Mesocosms of Seagrass (Zostera marina L.)

    NASA Astrophysics Data System (ADS)

    Lefcheck, J.; Duffy, J.

    2008-12-01

    Nutrient loading of coastal and estuarine waters threatens seagrass communities by promoting the growth of micro- and macroalgae, which then reduce the availability of light and nutrients. However, populations of invertebrate mesograzers are able to mitigate the negative impact of eutrophication through top-down control. We performed a factorial mesocosm experiment to examine the interactive relationships between light, nutrients, and mesograzer presence in structuring experimental ecosystems of eelgrass (Zostera marina). We found that mesograzer presence strongly reduced epiphytic algal biomass in every case, which remains consistent with previous mesocosm studies. We also observed a synergistic light-by-nutrient interaction that enhanced both epiphyte biomass and mesograzer abundance. The timing of this relationship is suggestive of weaker bottom-up control. Unlike previous studies, we found that light alone rarely affected either epiphyte biomass or mesograzer abundance. We believe that this result may be due to a combination of macroalgal shading and persistent grazing. Further processing of primary and secondary producer biomasses and elemental ratios, as well as the completion of feeding assays to gauge mesograzer feeding rates on different types of algae, will serve to reinforce these conclusions and to better define the relationship between these factors.

  11. Speciation in red algae: members of the Ceramiales as model organisms.

    PubMed

    Maggs, Christine A; Fletcher, Hugh L; Fewer, David; Loade, Louise; Mineur, Frédéric; Johnson, Mark P

    2011-09-01

    Red algae (Rhodophyta) are an ancient group with unusual morphological, biochemical, and life-history features including a complete absence of flagella. Although the red algae present many opportunities for studying speciation, this has rarely been explicitly addressed. Here, we examine an aspect of paternal gene flow by determining fertilization success of female Neosiphonia harveyi (Ceramiales), which retains a morphological record of all successful and unsuccessful female gametes. High fertilization rates were observed except when there were no males at all within the tidepool, or in a submerged marina environment. Small numbers of reproductive males were able to saturate fertilization rates, suggesting that limited availability of sperm may be less significant in red algae than previously thought. In another member of the Ceramiales, Antithamnion, relatively large chromosomes permit karyological identification of polyploids. The Western Pacific species Antithamnion sparsum is closely related to the diploid species Antithamnion defectum, known only from the Eastern Pacific, and appears to have evolved from it. Molecular evidence suggests that A. sparsum is an autopolyploid, and that the European species known as Antithamnion densum is divergent from the A. sparsum/defectum complex.

  12. Gas Exchange of Algae

    PubMed Central

    Ammann, Elizabeth C. B.; Lynch, Victoria H.

    1965-01-01

    Continuously growing cultures of Chlorella pyrenoidosa Starr 252, operating at constant density and under constant environmental conditions, produced uniform photosynthetic quotient (PQ = CO2/O2) and O2 values during 6 months of observations. The PQ for the entire study was 0.90 ± 0.024. The PQ remained constant over a threefold light-intensity change and a threefold change in O2 production (0.90 ± 0.019). At low light intensities, when the rate of respiration approached the rate of photosynthesis, the PQ became extremely variable. Six lamps of widely different spectral-energy distribution produced no significant change in the PQ (0.90 ± 0.025). Oxygen production was directly related to the number of quanta available, irrespective of spectral-energy distribution. Such dependability in producing uniform PQ and O2 values warrants a consideration of algae to maintain a constant gas environment for submarine or spaceship use. Images Fig. 1 PMID:14339260

  13. Hydroacoustic basis for detection and characterization of eelgrass (Zostera marina)

    SciTech Connect

    Sabol, B.; McCarthy, E.; Rocha, K.

    1997-06-01

    Understanding the distribution and density of seagrasses is important for a variety of environmental applications. Physical techniques for detection and characterization are labor and cost intensive and provide little insight into spatial distribution. optical-based techniques are limited by water clarity - frequently resulting in systematic underestimation of the extent of seagrasses. Active hydroacoustic techniques have shown the ability to detect seagrasses but the phenomenology behind detection is poorly understood. Laboratory and in-situ hydroacoustic measurements are presented for eelgrass (Zostera marina), a common seagrass in the United States. Based on these data, hydroacoustic approaches for wide area detection and mapping are discussed and several are demonstrated within areas of established eelgrass beds in Narragansett Bay, Rhode Island.

  14. Effect of Temperature and Nutrient Manipulations on eelgrass Zostera marina L. from the Pacific Northwest, USA

    EPA Science Inventory

    Global climate change will have a large impact on the three predominate drivers of estuarine seagrass productivity, temperature, light and nutrients. I experimentally evaluate the response of Pacific Northwest Z. marina to interactive effects of temperature and nutrient conditio...

  15. Estuarine intertidal sediment temperature variability in Zoster marina and Z. japonica habitats in Yaquina Bay, Oregon

    EPA Science Inventory

    Physical characterization of intertidal estuarine plant habitats over time may reveal distribution-limiting thresholds. Temperature data from loggers embedded in sediment in transects crossing Zostera marina and Z. japonica habitats in lower Yaquina Bay, Oregon display signific...

  16. Estuarine intertidal sediment temperature variability in Zoster marina and Z. japonica habitats in Yaquina Bay, Oregon

    EPA Science Inventory

    Physical characterization of intertidal estuarine plant habitats over time may reveal distribution-limiting thresholds. Temperature data from loggers embedded in sediment in transects crossing Zostera marina and Z. japonica habitats in lower Yaquina Bay, Oregon display signific...

  17. The bathymetric distribution of intertidal eelgrass Zostera marina L. in three coastal estuaries of Oregon

    EPA Science Inventory

    Distributions of native eelgrass Zostera marina L. within the intertidal and shallow subtidal zones of three Oregon coastal estuaries (Tillamook, Yaquina, and Alsea) were determined by digital classification of aerial color infrared (CIR) orthophotographs. Stratified random surv...

  18. Settlement with Marina will Result in Cleaner Air on Block Island

    EPA Pesticide Factsheets

    A marina in Block Island, R.I., has reduced its emissions and taken steps to comply with federal clean air laws following an inspection and follow-up action from the US Environmental Protection Agency.

  19. Distribution of intertidal eelgrass (Zostera marina L.) with bathymetry in three Pacific Northwest estuaries

    EPA Science Inventory

    Distributions of native intertidal eelgrass (Zostera marina L.) and non-vegetated substrates in three coastal estuaries of the Pacific Northwest (PNW) were determined using color infrared (CIR) aerial orthophotography during daylight low tides. Comparison of the digital classif...

  20. The bathymetric distribution of intertidal eelgrass Zostera marina L. in three coastal estuaries of Oregon

    EPA Science Inventory

    Distributions of native eelgrass Zostera marina L. within the intertidal and shallow subtidal zones of three Oregon coastal estuaries (Tillamook, Yaquina, and Alsea) were determined by digital classification of aerial color infrared (CIR) orthophotographs. Stratified random surv...

  1. Recolonization of intertidal Zostera marina L. (eelgrass) following experimental shoot removal

    EPA Science Inventory

    The recovery of eelgrass (Zostera marina) from physical disturbances is understudied and no attention has been given to the likely differences in damage recovery rates between the continuous lower intertidal perennial meadows and higher intertidal eelgrass patches. In the present...

  2. ZOSTERA MARINA IN A PACIFIC NORTHWEST ESTUARY: WHAT FACTORS CONTROL INTERTIDAL DISTRIBUTION?

    EPA Science Inventory

    The impact of four factors (desiccation, macroalgae, erosion, light) on the distribution of Zostera marina was examined across tidal and bathymetric slope gradients. Data detailing seagrass characteristics, including 1 production, macroalgae biomass and sediment characteristics ...

  3. Effect of Temperature and Nutrient Manipulations on eelgrass Zostera marina L. from the Pacific Northwest, USA

    EPA Science Inventory

    Global climate change will have a large impact on the three predominate drivers of estuarine seagrass productivity, temperature, light and nutrients. I experimentally evaluate the response of Pacific Northwest Z. marina to interactive effects of temperature and nutrient conditio...

  4. Recolonization of intertidal Zostera marina L. (eelgrass) following experimental shoot removal

    EPA Science Inventory

    The recovery of eelgrass (Zostera marina) from physical disturbances is understudied and no attention has been given to the likely differences in damage recovery rates between the continuous lower intertidal perennial meadows and higher intertidal eelgrass patches. In the present...

  5. ZOSTERA MARINA IN A PACIFIC NORTHWEST ESTUARY: WHAT FACTORS CONTROL INTERTIDAL DISTRIBUTION?

    EPA Science Inventory

    The impact of four factors (desiccation, macroalgae, erosion, light) on the distribution of Zostera marina was examined across tidal and bathymetric slope gradients. Data detailing seagrass characteristics, including 1 production, macroalgae biomass and sediment characteristics ...

  6. Distribution of intertidal eelgrass (Zostera marina L.) with bathymetry in three Pacific Northwest estuaries

    EPA Science Inventory

    Distributions of native intertidal eelgrass (Zostera marina L.) and non-vegetated substrates in three coastal estuaries of the Pacific Northwest (PNW) were determined using color infrared (CIR) aerial orthophotography during daylight low tides. Comparison of the digital classif...

  7. DIGESTIVE BIOAVAILABILITY TO A DEPOSIT FEDDER (ARENICOLA MARINA) OF POLYCYCLIC AROMATIC HYDROCARBONS ASSOCIATED WITH ANTHRPOGENIC PARTICLES

    EPA Science Inventory

    Marine sediments around urban areas serve as catch basins for anthropogenic particles containing polycyclic aromatic hydrocarbons (PAHs). Using incubations with gut fluids extracted from a deposit-feeding polychaete (Arenicola marina), we determined the digestive bioavailability ...

  8. Growth and alkaline phosphatase activity of Chattonella marina and Heterosigma akashiwo in response to phosphorus limitation.

    PubMed

    Wang, Zhao-Hui; Liang, Yu

    2015-02-01

    The growth and alkaline phosphatase activity (APA) of two raphidophyceae species Chattonella marina and Heterosigma akashiwo were investigated in response to P-limitation and subsequent addition of dissolved inorganic phosphorus (DIP, NaH2PO4) and two dissolved organic phosphorus (DOP) compounds: guanosine 5-monophosphate (GMP) and triethyl phosphate (TEP). APA levels increased greatly after P-starvation as the decrease of the cellular phosphorus quotes (Qp). C. marina responded to P-limitation quickly and strongly, with 10-fold increase in APA within 24 hr after P-starvation. The larger difference between maximal and minimal QP values in C. marina indicated its high capacity in P storage. APA of H. akashiwo was maximally enlarged about 2.5 times at 48 hr of P-starvation. After the addition of nutrients, cell numbers of C. marina increased in all treatments including the P-free culture, demonstrating the higher endurance of C. marina to P-limitation. However, those of H. akashiwo increased only in DIP and GMP cultures. APA increased only after the addition of the monophosphate ester GMP. The results suggest that quick responses of C. marina to P-limitation, high capacity in P storage as well as endurance for P-depletion provide this species an ecological advantage in phytoplankton community competition under DIP-limited conditions. Copyright © 2014. Published by Elsevier B.V.

  9. Effects of used lubricating oil on two mangroves Aegiceras corniculatum and Avicennia marina.

    PubMed

    Ye, Yong; Tam, N F Y

    2007-01-01

    An outdoor experiment was set up to investigate the effects of used lubricating oil (5 L/m2) on Aegiceras corniculatum Blanco. and Avicennia marina (Forsk) Vierh., two salt-excreting mangroves. A. marina was more sensitive to used lubricating oil than A. corniculatum and canopy-oiling resulted in more direct physical damage and stronger lethal effects than base-oiling. When treated with canopy-oiling, half of A. corniculatum plants survived for the whole treatment time (90 d); but, for A. marina, high mortality (83%) resulted from canopy-oiling within 3 weeks and no plants survived for 80 d. Base-oiling had no lethal effects onA. corniculatum plants even at the termination of this experiment, but 83% of A. marina plants died 80 d after treatment. Forty days after canopy-oiling, 93% of A. corniculatum leaves fell and no live leaves remained on A. marina plants. By the end of the experiment, base-oiling treatment resulted in about 45% of A. corniculatum leaves falling, while all A. marina leaves and buds were burned to die. Lubricating oil resulted in physiological damage to A. corniculatum leaves, including decreases in chlorophyll and carotenoid contents, nitrate reductase, peroxidase and superoxide dismutase activities, and increases in malonaldehyde contents. For both species, oil pollution significantly reduced leaf, root, and total biomass, but did not significantly affect stem biomass. Oil pollution resulted in damage to the xylem vessels of fine roots but not to those of mediate roots.

  10. Complete genome of Cobetia marina JCM 21022T and phylogenomic analysis of the family Halomonadaceae

    NASA Astrophysics Data System (ADS)

    Tang, Xianghai; Xu, Kuipeng; Han, Xiaojuan; Mo, Zhaolan; Mao, Yunxiang

    2016-09-01

    Cobetia marina is a model proteobacteria in researches on marine biofouling. Its taxonomic nomenclature has been revised many times over the past few decades. To better understand the role of the surface-associated lifestyle of C. marina and the phylogeny of the family Halomonadaceae, we sequenced the entire genome of C. marina JCM 21022T using single molecule real-time sequencing technology (SMRT) and performed comparative genomics and phylogenomics analyses. The circular chromosome was 4 176 300 bp with an average GC content of 62.44% and contained 3 611 predicted coding sequences, 72 tRNA genes, and 21 rRNA genes. The C. marina JCM 21022T genome contained a set of crucial genes involved in surface colonization processes. The comparative genome analysis indicated the significant diff erences between C. marina JCM 21022T and Cobetia amphilecti KMM 296 (formerly named C. marina KMM 296) resulted from sequence insertions or deletions and chromosomal recombination. Despite these diff erences, pan and core genome analysis showed similar gene functions between the two strains. The phylogenomic study of the family Halomonadaceae is reported here for the first time. We found that the relationships were well resolved among every genera tested, including Chromohalobacter, Halomonas, Cobetia, Kushneria, Zymobacter, and Halotalea.

  11. Polysaccharides of the red algae.

    PubMed

    Usov, Anatolii I

    2011-01-01

    Red algae (Rhodophyta) are known as the source of unique sulfated galactans, such as agar, agarose, and carrageenans. The wide practical uses of these polysaccharides are based on their ability to form strong gels in aqueous solutions. Gelling polysaccharides usually have molecules built up of repeating disaccharide units with a regular distribution of sulfate groups, but most of the red algal species contain more complex galactans devoid of gelling ability because of various deviations from the regular structure. Moreover, several red algae may contain sulfated mannans or neutral xylans instead of sulfated galactans as the main structural polysaccharides. This chapter is devoted to a description of the structural diversity of polysaccharides found in the red algae, with special emphasis on the methods of structural analysis of sulfated galactans. In addition to the structural information, some data on the possible use of red algal polysaccharides as biologically active polymers or as taxonomic markers are briefly discussed.

  12. Neuroprotective Effects of Marine Algae

    PubMed Central

    Pangestuti, Ratih; Kim, Se-Kwon

    2011-01-01

    The marine environment is known as a rich source of chemical structures with numerous beneficial health effects. Among marine organisms, marine algae have been identified as an under-exploited plant resource, although they have long been recognized as valuable sources of structurally diverse bioactive compounds. Presently, several lines of studies have provided insight into biological activities and neuroprotective effects of marine algae including antioxidant, anti-neuroinflammatory, cholinesterase inhibitory activity and the inhibition of neuronal death. Hence, marine algae have great potential to be used for neuroprotection as part of pharmaceuticals, nutraceuticals and functional foods. This contribution presents an overview of marine algal neuroprotective effects and their potential application in neuroprotection. PMID:21673890

  13. Microscopic Gardens: A Close Look at Algae.

    ERIC Educational Resources Information Center

    Foote, Mary Ann

    1983-01-01

    Describes classroom activities using algae, including demonstration of eutrophication, examination of mating strains, and activities with Euglena. Includes on algal morphology/physiology, types of algae, and field sources for collecting these organisms. (JN)

  14. Microscopic Gardens: A Close Look at Algae.

    ERIC Educational Resources Information Center

    Foote, Mary Ann

    1983-01-01

    Describes classroom activities using algae, including demonstration of eutrophication, examination of mating strains, and activities with Euglena. Includes on algal morphology/physiology, types of algae, and field sources for collecting these organisms. (JN)

  15. Formation of algae growth constitutive relations for improved algae modeling.

    SciTech Connect

    Gharagozloo, Patricia E.; Drewry, Jessica Louise.

    2013-01-01

    This SAND report summarizes research conducted as a part of a two year Laboratory Directed Research and Development (LDRD) project to improve our abilities to model algal cultivation. Algae-based biofuels have generated much excitement due to their potentially large oil yield from relatively small land use and without interfering with the food or water supply. Algae mitigate atmospheric CO2 through metabolism. Efficient production of algal biofuels could reduce dependence on foreign oil by providing a domestic renewable energy source. Important factors controlling algal productivity include temperature, nutrient concentrations, salinity, pH, and the light-to-biomass conversion rate. Computational models allow for inexpensive predictions of algae growth kinetics in these non-ideal conditions for various bioreactor sizes and geometries without the need for multiple expensive measurement setups. However, these models need to be calibrated for each algal strain. In this work, we conduct a parametric study of key marine algae strains and apply the findings to a computational model.

  16. 21 CFR 184.1121 - Red algae.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 21 Food and Drugs 3 2013-04-01 2013-04-01 false Red algae. 184.1121 Section 184.1121 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) FOOD FOR HUMAN... Substances Affirmed as GRAS § 184.1121 Red algae. (a) Red algae are seaweeds of the species...

  17. 21 CFR 184.1120 - Brown algae.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 21 Food and Drugs 3 2011-04-01 2011-04-01 false Brown algae. 184.1120 Section 184.1120 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) FOOD FOR HUMAN... Substances Affirmed as GRAS § 184.1120 Brown algae. (a) Brown algae are seaweeds of the species...

  18. 21 CFR 184.1121 - Red algae.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 21 Food and Drugs 3 2010-04-01 2009-04-01 true Red algae. 184.1121 Section 184.1121 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) FOOD FOR HUMAN... Substances Affirmed as GRAS § 184.1121 Red algae. (a) Red algae are seaweeds of the species...

  19. 21 CFR 184.1121 - Red algae.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 21 Food and Drugs 3 2011-04-01 2011-04-01 false Red algae. 184.1121 Section 184.1121 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) FOOD FOR HUMAN... Substances Affirmed as GRAS § 184.1121 Red algae. (a) Red algae are seaweeds of the species...

  20. 21 CFR 184.1120 - Brown algae.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 21 Food and Drugs 3 2013-04-01 2013-04-01 false Brown algae. 184.1120 Section 184.1120 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) FOOD FOR HUMAN... Substances Affirmed as GRAS § 184.1120 Brown algae. (a) Brown algae are seaweeds of the species...

  1. 21 CFR 184.1120 - Brown algae.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 21 Food and Drugs 3 2012-04-01 2012-04-01 false Brown algae. 184.1120 Section 184.1120 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) FOOD FOR HUMAN... Substances Affirmed as GRAS § 184.1120 Brown algae. (a) Brown algae are seaweeds of the species...

  2. 21 CFR 184.1121 - Red algae.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 21 Food and Drugs 3 2012-04-01 2012-04-01 false Red algae. 184.1121 Section 184.1121 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) FOOD FOR HUMAN... Substances Affirmed as GRAS § 184.1121 Red algae. (a) Red algae are seaweeds of the species...

  3. 21 CFR 184.1120 - Brown algae.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 21 Food and Drugs 3 2010-04-01 2009-04-01 true Brown algae. 184.1120 Section 184.1120 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) FOOD FOR HUMAN... Substances Affirmed as GRAS § 184.1120 Brown algae. (a) Brown algae are seaweeds of the species...

  4. Current European Labyrinthula zosterae Are Not Virulent and Modulate Seagrass (Zostera marina) Defense Gene Expression

    PubMed Central

    Brakel, Janina; Werner, Franziska Julie; Tams, Verena; Reusch, Thorsten B. H.; Bockelmann, Anna-Christina

    2014-01-01

    Pro- and eukaryotic microbes associated with multi-cellular organisms are receiving increasing attention as a driving factor in ecosystems. Endophytes in plants can change host performance by altering nutrient uptake, secondary metabolite production or defense mechanisms. Recent studies detected widespread prevalence of Labyrinthula zosterae in European Zostera marina meadows, a protist that allegedly caused a massive amphi-Atlantic seagrass die-off event in the 1930's, while showing only limited virulence today. As a limiting factor for pathogenicity, we investigated genotype×genotype interactions of host and pathogen from different regions (10–100 km-scale) through reciprocal infection. Although the endophyte rapidly infected Z. marina, we found little evidence that Z. marina was negatively impacted by L. zosterae. Instead Z. marina showed enhanced leaf growth and kept endophyte abundance low. Moreover, we found almost no interaction of protist×eelgrass-origin on different parameters of L. zosterae virulence/Z. marina performance, and also no increase in mortality after experimental infection. In a target gene approach, we identified a significant down-regulation in the expression of 6/11 genes from the defense cascade of Z. marina after real-time quantitative PCR, revealing strong immune modulation of the host's defense by a potential parasite for the first time in a marine plant. Nevertheless, one gene involved in phenol synthesis was strongly up-regulated, indicating that Z. marina plants were probably able to control the level of infection. There was no change in expression in a general stress indicator gene (HSP70). Mean L. zosterae abundances decreased below 10% after 16 days of experimental runtime. We conclude that under non-stress conditions L. zosterae infection in the study region is not associated with substantial virulence. PMID:24691450

  5. Biological importance of marine algae

    PubMed Central

    El Gamal, Ali A.

    2009-01-01

    Marine organisms are potentially prolific sources of highly bioactive secondary metabolites that might represent useful leads in the development of new pharmaceutical agents. Algae can be classified into two main groups; first one is the microalgae, which includes blue green algae, dinoflagellates, bacillariophyta (diatoms)… etc., and second one is macroalgae (seaweeds) which includes green, brown and red algae. The microalgae phyla have been recognized to provide chemical and pharmacological novelty and diversity. Moreover, microalgae are considered as the actual producers of some highly bioactive compounds found in marine resources. Red algae are considered as the most important source of many biologically active metabolites in comparison to other algal classes. Seaweeds are used for great number of application by man. The principal use of seaweeds as a source of human food and as a source of gums (phycocollides). Phycocolloides like agar agar, alginic acid and carrageenan are primarily constituents of brown and red algal cell walls and are widely used in industry. PMID:23960716

  6. Algae. LC Science Tracer Bullet.

    ERIC Educational Resources Information Center

    Niskern, Diana, Comp.

    The plants and plantlike organisms informally grouped together as algae show great diversity of form and size and occur in a wide variety of habitats. These extremely important photosynthesizers are also economically significant. For example, some species contaminate water supplies; others provide food for aquatic animals and for man; still others…

  7. Algae -- a poor man's HAART?

    PubMed

    Teas, Jane; Hebert, James R; Fitton, J Helen; Zimba, Paul V

    2004-01-01

    Drawing inferences from epidemiologic studies of HIV/AIDS and in vivo and in vitro HIV inhibition by algae, we propose algal consumption as one unifying characteristic of countries with anomalously low rates. HIV/AIDS incidence and prevalence in Eastern Asia ( approximately 1/10000 adults in Japan and Korea), compared to Africa ( approximately 1/10 adults), strongly suggest that differences in IV drug use and sexual behavior are insufficient to explain the 1000-fold variation. Even in Africa, AIDS/HIV rates vary. Chad has consistently reported low rates of HIV/AIDS (2-4/100). Possibly not coincidentally, most people in Japan and Korea eat seaweed daily and the Kanemba, one of the major tribal groups in Chad, eat a blue green alga (Spirulina) daily. Average daily algae consumption in Asia and Africa ranges between 1 and 2 tablespoons (3-13 g). Regular consumption of dietary algae might help prevent HIV infection and suppress viral load among those infected.

  8. Cellulomonas marina sp. nov., isolated from deep-sea water.

    PubMed

    Zhang, Limin; Xi, Lijun; Qiu, Danheng; Song, Lei; Dai, Xin; Ruan, Jisheng; Huang, Ying

    2013-08-01

    A bacterial strain FXJ8.089(T) was isolated from deep-sea water collected from the southwest Indian Ocean (49° 39' E 37° 47' S) at a depth of 2800 m, and its taxonomic position was investigated by a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain FXJ8.089(T) belonged to the genus Cellulomonas and had the highest similarities with Cellulomonas oligotrophica (96.9 %) and Cellulomonas aerilata (96.6 %). It contained MK-9(H4) as the predominant menaquinone. The polar lipids were diphosphatidylglycerol and phosphatidylinositol mannosides. The cell-wall peptidoglycan type was A4β with an interpeptide bridge L-Orn-D-Glu. The cell-wall sugars were glucose, mannose and ribose. The DNA G+C content was 70.3 mol%. The strain also showed a number of physiological and biochemical characteristics that were distinct from the closely related species. Based on phenotypic and genotypic data, strain FXJ8.089(T) (= CGMCC 4.6945(T) = DSM 24960(T)) represents a novel species of the genus Cellulomonas, for which the name Cellulomonas marina sp. nov. is proposed.

  9. Auditing a flooded quarry prior to marina development

    NASA Astrophysics Data System (ADS)

    Baillie, Priscilla W.

    1992-07-01

    Development of a marina in a flooded brownstone quarry will require construction of a canal to the Connecticut River through an isthmus separating the two systems. An environmental audit over a 16-month period developed quantitative limnological data required by regulatory agencies. The deep quarry basin, protected by high sandstone walls, became strongly stratified in summer. Development of littoral vegetation in the quarry was prevented by the steep sides of the basin. Unusual characteristics of the manmade quarry basin, compared to most natural lakes in Connecticut, included a mean depth of 14 m, an intense thermocline, and negative heterograde oxygen profiles with metalimnetic minima. Alkalinity, conductivity, and nutrient levels differed significantly between the quarry and the river. Mean chlorophyll a concentrations in the two systems were similar, but the distribution of phytoplankton classes were quite different. The environmental audit, by comparing physical, chemical, and biological characteristics of the quarry to those of the river, allowed prediction of changes in trophic status when the two systems are joined.

  10. Mobile epifauna on Zostera marina, and infauna of its inflorescences

    NASA Astrophysics Data System (ADS)

    Hellwig-Armonies, Monika

    1988-06-01

    The faunal colonization of the leaves and inflorescences of intertidal Zostera marina L. and of the ambient water has been studied at the Island of Sylt (North Sea). The abundance of the snail Littorina littorea L. and the isopod Jaera albifrons Leach correlates significantly with leaf surface area. This is not the case with the abundance of meiofaunal Plathelminthes, Nematoda, Copepoda, and Polychaeta. However, they increase significantly with the numbers of generative shoots in the sampled seagrass bunches. Members of these taxa inhabit the Zostera inflorescences, and average abundance increases with the degree of decay of inflorescences. This temporary microhabitat presumably offers food and shelter. Copepods and ostracods dominate in the ambient water. Planktonic calanoid copepods correlate with the amount of sampled seawater, while Ostracoda correlate with the amount of resuspended detritus suggesting that they were resuspended themselves. The study shows that some meiofaunal taxa can rapidly exploit a short-lived habitat such as the Zostera inflorescences. Juvenile polychaetes use inflorescences as a nursery.

  11. Spawning synchrony in Arenicola marina: evidence for sex pheromonal control

    PubMed Central

    Hardege, J. D.; Bentley, M. G.

    1997-01-01

    Chemical communication systems controlling reproductive behaviour have been shown in a number of marine polychaetes. This study investigated the use of sex pheromones to coordinate spawning behaviour in gravid lugworms (Arenicola marina). Lugworms typically reproduce in the autumn, during low water of spring tides, and often exhibit epidemic spawning. Females release gametes within the burrow whereas males deposit spermatozoa on to the beach surface. The incoming tide dilutes the spermatozoa and transports them to the females' burrows. Sperm is diluted rapidly and sperm concentrations fall below the minimum required for fertilization within a few minutes. The present investigation establishes the existence of chemical signals synchronizing spawning for the first time in an iteroparous polychaete. The process can be divided into two steps, the induction of gamete release by waterborne chemical cues and burrow irrigation behaviour in females: burrow irrigation representing the means by which spermatozoa are carried to the eggs. In both sexes, the release of gametes can be induced by exposure to sea water into which other individuals had previously spawned. Males also respond to odour compounds from other males. The overall effect of the chemical signals results in synchronized, mass spawning of a population.

  12. Distinct community dynamics at two artificial habitats in a recreational marina.

    PubMed

    Oricchio, Felipe T; Pastro, Gabriela; Vieira, Edson A; Flores, Augusto A V; Gibran, Fernando Z; Dias, Gustavo M

    2016-12-01

    Man-made facilities along coastlines modify water circulation and sedimentation dynamics which can affect the structure of marine benthic and pelagic communities. To test how environmental heterogeneity associated with a recreational marina affects the structure of the fouling community and the benthic-pelagic link, we conducted an experiment in which predation effects on recruitment and community structure were assessed in two artificial habitats: inside the marina, an area of calm waters and often disturbed by boating activity, and the breakwater, a more hydrodynamic area. Using visual censuses and video footages we also described the predation pressure and the identity of predators on the two areas. Inside the marina, the recruitment of ascidians and serpulids, but not of bryozoans, was restricted in some occasions, possibly due to reduced water circulation. Predation, mainly by the silver porgy fish Diplodus argenteus, reduced the survivor of didemnid ascidians on both areas, but predation intensity was 40 times higher in the breakwater than inside the marina. While the two artificial habitats did not necessarily support distinct communities, low recruitment coupled to weak predation inside the marina, a less dynamic environment, likely imply lower resilience and more susceptibility to disturbance. Copyright © 2016 Elsevier Ltd. All rights reserved.

  13. Occurrence and distribution of polycyclic aromatic hydrocarbons in surface sediments of San Diego Bay marinas.

    PubMed

    Neira, Carlos; Cossaboon, Jennifer; Mendoza, Guillermo; Hoh, Eunha; Levin, Lisa A

    2017-01-15

    Polycyclic aromatic hydrocarbons (PAHs) have garnered much attention due to their bioaccumulation, carcinogenic properties, and persistence in the environment. Investigation of the spatial distribution, composition, and sources of PAHs in sediments of three recreational marinas in San Diego Bay, California revealed significant differences among marinas, with concentrations in one site exceeding 16,000ngg(-1). 'Hotspots' of PAH concentration suggest an association with stormwater outfalls draining into the basins. High-molecular weight PAHs (4-6 rings) were dominant (>86%); the average percentage of potentially carcinogenic PAHs was high in all sites (61.4-70%) but ecotoxicological risks varied among marinas. Highly toxic benzo(a)pyrene (BaP) was the main contributor (>90%) to the total toxic equivalent quantity (TEQ) in marinas. PAHs in San Diego Bay marina sediments appear to be derived largely from pyrogenic sources, potentially from combustion products that reach the basins by aerial deposition and stormwater drainage from nearby streets and parking lots. Copyright © 2016 Elsevier Ltd. All rights reserved.

  14. Physiological Responses of Oxyrrhis marina to the Altered Fatty Acid Composition of Virally Infected Emiliania huxleyi

    NASA Astrophysics Data System (ADS)

    Goode, A.; Fields, D.; Martinez-Martinez, J.

    2016-02-01

    Emiliania huxleyi is a coccolithophore that forms some of the largest phytoplankton blooms in the ocean. E. huxleyi abundance, distribution, and composition of essential fatty acids make them a key component in marine food webs. E. huxleyi-specific viruses have been shown to control the bloom duration and change the lipid composition of E. huxleyi cells. Alteration of essential fatty acids at the base of the food web may have downstream effects on trophic interactions. Oxyrrhis marina has been studied extensively, and is used as a micrograzer model organism. We investigated differential physiological responses of O. marina to a diet ( 100:1 prey:predator ratio) of virallyinfected versus uninfected E. huxleyi cells over a maximum 7-day period. Our results showed higher O. marina grazing rates on uninfected cells (p<0.05). However, O. marina had faster growth rates (p<0.05) and a smaller relative increase in saturated fatty acids and decrease in monounsaturated fatty acids (p<0.05) when fed infected E. huxleyi cells. This suggests a higher nutritional value of infected cells and/or better assimilation by O. marina of infected cells' carbon. In the marine environment this would translate into larger carbon transport to higher trophic levels when blooms become infected.

  15. Antifouling paint booster biocides (Irgarol 1051 and diuron) in marinas and ports of Bushehr, Persian Gulf.

    PubMed

    Saleh, Abolfazl; Molaei, Saeideh; Sheijooni Fumani, Neda; Abedi, Ehsan

    2016-04-15

    In the present study, antifouling paint booster biocides, Irgarol 1051 and diuron were measured in ports and marinas of Bushehr, Iran. Results showed that in seawater samples taken from ports and marinas, Irgarol was found at the range of less than LOD to 63.4ngL(-1) and diuron was found to be at the range of less than LOD to 29.1ngL(-1) (in Jalali marina). 3,4-dichloroaniline (3,4-DCA), as a degradation product of diuron, was also analyzed and its maximum concentration was 390ngL(-1). Results for analysis of Irgarol 1051 in sediments showed a maximum concentration of 35.4ngg(-1) dry weight in Bandargah marina. A comparison between the results of this study and those of other published works showed that Irgarol and diuron pollutions in ports and marinas of Bushehr located in the Persian Gulf were less than the average of reports from other parts of the world. Copyright © 2016 Elsevier Ltd. All rights reserved.

  16. Decline in eelgrass ( Zostera marina L.) in Long Island Sound near Millstone Point, Connecticut (USA) unrelated to thermal input

    NASA Astrophysics Data System (ADS)

    Keser, Milan; Swenarton, John T.; Vozarik, Joseph M.; Foertch, James F.

    2003-02-01

    Eelgrass ( Zostera marina L.) shoot density, seed-bearing shoot abundance, shoot length, and standing stock biomass were monitored during summer months from 1985 to 2000 at three locations in eastern Long Island Sound (LIS) near Millstone Power Station (MPS), Waterford, Connecticut, USA. Short-term declines in eelgrass abundance were directly associated with fouling and overgrowth of eelgrass on two occasions; once by blue mussels ( Mytilus edulis) and once by a bloom of green algae ( Cladophora spp.). Analysis of long-term trends indicated some degree of decline in most of the parameters examined at all three areas monitored. The spatial relationship of the long-term eelgrass declines suggests primary causal factors other than the power plant discharge or regional climate change. Two populations to the east of MPS and near the fringes of the thermal plume (<1.5 km from the MPS discharge to LIS) exhibited only slight declines over the 16-y study period and thermal input from MPS to these sites was minimal (<1 °C above ambient conditions). By comparison, heavy eelgrass losses were documented in the Niantic River, located >2 km from the power plant thermal plume. Die-offs of entire individual eelgrass study beds in the Niantic River were observed on five separate occasions during the study with no sign of recovery. While the causes were not determined, anthropogenic influences such as nutrient loading from surface run-off and groundwater sources may have contributed to observed declines. The Niantic River has a more restricted tidal inlet and is closer to sources of nutrient enrichment than Jordan Cove. Historically, eelgrass has ranged to far western reaches of LIS, but over the last century has become restricted to the easternmost third of the Connecticut coastline due to nutrient loading and eutrophication of the western portions. This study suggests that the west-to-east declining trend in eelgrass distribution in LIS may be further progressing.

  17. FACTORS CONTROLLING ZOSTERA MARINA L. GROWTH IN THE EASTERN AND WESTERN PACIFIC OCEAN: COMPARISONS BETWEEN SOUTH KOREA AND OREGON, USA

    EPA Science Inventory

    Zostera marina distribution is circum-global and tolerates a wide range of environmental conditions. Consequently, it is likely that populations have adapted to local environmental conditions of light, temperature and nutrient supply. We compared Z. marina growth dynamics over a ...

  18. Friday Harbor Marina Expansion Study--San Juan Island, Washington: Final Detailed Project Report and Environmental Assessment.

    DTIC Science & Technology

    1981-04-01

    Juan Marina Inc. Don F. Brown Self Steve F. Brown San Juan Marina Inc. Thoms Chittenden Self Alex D. Crichton Self Alan C,-mings KGMI-Bellingham Lois...Self Susan E. Risser Self Noble W. Starr Self Thomas C. Starr Self Corinne R. Towne Se"I Michael P. Vouri Bellingham Marine Industries June M. Vynne Self

  19. INTERTIDAL SEDIMENT TEMPERATURE VARIANCE AS A POSSIBLE LIMITING FACTOR FOR EELGRASSES ZOSTERA MARINA AND ZOSTERA JAPONICA IN YAQUINA BAY, OR

    EPA Science Inventory

    The eelgrass species Zostera marina and Z. japonica co-occur in most Pacific Northwest estuaries; Z. marina is regarded as a native species, Z. japonica as non-indigenous, introduced in Yaquina Bay in approximately 1975. The mean tidal range is ~2 m, extreme ~3m. The vertical d...

  20. FACTORS CONTROLLING ZOSTERA MARINA L. GROWTH IN THE EASTERN AND WESTERN PACIFIC OCEAN: COMPARISONS BETWEEN SOUTH KOREA AND OREGON, USA

    EPA Science Inventory

    Zostera marina distribution is circum-global and tolerates a wide range of environmental conditions. Consequently, it is likely that populations have adapted to local environmental conditions of light, temperature and nutrient supply. We compared Z. marina growth dynamics over a ...

  1. INTERTIDAL SEDIMENT TEMPERATURE VARIANCE AS A POSSIBLE LIMITING FACTOR FOR EELGRASSES ZOSTERA MARINA AND ZOSTERA JAPONICA IN YAQUINA BAY, OR

    EPA Science Inventory

    The eelgrass species Zostera marina and Z. japonica co-occur in most Pacific Northwest estuaries; Z. marina is regarded as a native species, Z. japonica as non-indigenous, introduced in Yaquina Bay in approximately 1975. The mean tidal range is ~2 m, extreme ~3m. The vertical d...

  2. Glycolate Pathway in Algae 1

    PubMed Central

    Hess, J. L.; Tolbert, N. E.

    1967-01-01

    No glycolate oxidase activity could be detected by manometric, isotopic, or spectrophotometric techniques in cell extracts from 5 strains of algae grown in the light with CO2. However, NADH:glyoxylate reductase, phosphoglycolate phosphatase and isocitrate dehydrogenase were detected in the cell extracts. The serine formed by Chlorella or Chlamydomonas after 12 seconds of photosynthetic 14CO2 fixation contained 70 to 80% of its 14C in the carboxyl carbon. This distribution of label in serine was similar to that in phosphoglycerate from the same experiment. Thus, in algae serine is probably formed directly from phosphoglycerate. These results differ from those of higher plants which form uniformly labeled serine from glycolate in short time periods when phosphoglycerate is still carboxyl labeled. In glycolate formed by algae in 5 and 10 seconds of 14CO2 fixation, C2 was at least twice as radioactive as C1. A similar skewed labeling in C2 and C3 of 3-phosphoglycerate and serine suggests a common precursor for glycolate and 3-phosphoglycerate. Glycine formed by the algae, however, from the same experiments was uniformly labeled. Manganese deficient Chlorella incorporated only 2% of the total 14CO2 fixed in 10 minutes into glycolate, while in normal Chlorella 30% of the total 14C was found in glycolate. Manganese deficient Chlorella also accumulated more 14C in glycine and serine. Glycolate excretion by Chlorella was maximal in 10 mm bicarbonate and occurred only in the light, and was not influenced by the addition of glycolate. No time dependent uptake of significant amounts of either glycolate or phosphoglycolate was observed. When small amounts of glycolate-2-14C were fed to Chlorella or Scenedesmus, only 2 to 3% was metabolized after 30 to 60 minutes. The algae were not capable of significant glycolate metabolism as is the higher plant. The failure to detect glycolate oxidase, the low level glycolate-14C metabolism, and the formation of serine from phosphoglycerate

  3. Do small marinas drive habitat specific impacts? A case study from Mediterranean Sea.

    PubMed

    Di Franco, Antonio; Graziano, Mariagrazia; Franzitta, Giulio; Felline, Serena; Chemello, Renato; Milazzo, Marco

    2011-05-01

    Many human activities add new structures to the marine landscape. Despite the fact that human structures cause some inevitable impacts, surprisingly little information exists on the effects of marina on natural marine assemblages. The aim of this paper is to assess habitat-specific response of benthic sessile organisms of rocky shores in relation to the presence of a small marina. Sampling was carried out at three coastal habitats (midshore, lowshore and subtidal) by means of visual censuses adopting an after-control-impact (ACI) experimental design. It appears that the marina affects the structure and composition of benthic communities of both the midshore and the lowshore. Little effect was evident on shallow subtidal assemblage structure. The results of the present study clearly show habitat-specific responses of coastal benthic assemblages to the presence of infrastructure. Copyright © 2011 Elsevier Ltd. All rights reserved.

  4. Biodynamic modelling and the prediction of accumulated trace metal concentrations in the polychaete Arenicola marina.

    PubMed

    Casado-Martinez, M Carmen; Smith, Brian D; DelValls, T Angel; Luoma, Samuel N; Rainbow, Philip S

    2009-10-01

    The use of biodynamic models to understand metal uptake directly from sediments by deposit-feeding organisms still represents a special challenge. In this study, accumulated concentrations of Cd, Zn and Ag predicted by biodynamic modelling in the lugworm Arenicola marina have been compared to measured concentrations in field populations in several UK estuaries. The biodynamic model predicted accumulated field Cd concentrations remarkably accurately, and predicted bioaccumulated Ag concentrations were in the range of those measured in lugworms collected from the field. For Zn the model showed less but still good comparability, accurately predicting Zn bioaccumulation in A. marina at high sediment concentrations but underestimating accumulated Zn in the worms from sites with low and intermediate levels of Zn sediment contamination. Therefore, it appears that the physiological parameters experimentally derived for A. marina are applicable to the conditions encountered in these environments and that the assumptions made in the model are plausible.

  5. The remote sensing of algae

    NASA Technical Reports Server (NTRS)

    Thorne, J. F.

    1977-01-01

    State agencies need rapid, synoptic and inexpensive methods for lake assessment to comply with the 1972 Amendments to the Federal Water Pollution Control Act. Low altitude aerial photography may be useful in providing information on algal type and quantity. Photography must be calibrated properly to remove sources of error including airlight, surface reflectance and scene-to-scene illumination differences. A 550-nm narrow wavelength band black and white photographic exposure provided a better correlation to algal biomass than either red or infrared photographic exposure. Of all the biomass parameters tested, depth-integrated chlorophyll a concentration correlated best to remote sensing data. Laboratory-measured reflectance of selected algae indicate that different taxonomic classes of algae may be discriminated on the basis of their reflectance spectra.

  6. The remote sensing of algae

    NASA Technical Reports Server (NTRS)

    Thorne, J. F.

    1977-01-01

    State agencies need rapid, synoptic and inexpensive methods for lake assessment to comply with the 1972 Amendments to the Federal Water Pollution Control Act. Low altitude aerial photography may be useful in providing information on algal type and quantity. Photography must be calibrated properly to remove sources of error including airlight, surface reflectance and scene-to-scene illumination differences. A 550-nm narrow wavelength band black and white photographic exposure provided a better correlation to algal biomass than either red or infrared photographic exposure. Of all the biomass parameters tested, depth-integrated chlorophyll a concentration correlated best to remote sensing data. Laboratory-measured reflectance of selected algae indicate that different taxonomic classes of algae may be discriminated on the basis of their reflectance spectra.

  7. Algae control for hydrogeneration canals

    SciTech Connect

    Grahovac, P.

    1997-02-16

    The purpose of this Cooperative Research and Development Agreement (CRADA) was to assess and develop control practices for nuisance algae growth in power canal that delivers water to hydro-generation facilities. This growth results in expenditures related not only to lost generation but also labor and materials costs associated with implementing remediation procedures. On an industry-wide basis these costs associated with nuisance algal growth are estimated to be several million dollars per year.

  8. Ruegeria marina sp. nov., isolated from marine sediment.

    PubMed

    Huo, Ying-Yi; Xu, Xue-Wei; Li, Xue; Liu, Chen; Cui, Heng-Lin; Wang, Chun-Sheng; Wu, Min

    2011-02-01

    A Gram-negative, neutrophilic and rod-shaped bacterium, strain ZH17(T), was isolated from a marine sediment of the East China Sea and subjected to a polyphasic taxonomic characterization. The isolate grew in the presence of 0-7.5 % (w/v) NaCl and at pH 6.5-9.0; optimum growth was observed with 0.5-3.0 % (w/v) NaCl and at pH 7.5. Chemotaxonomic analysis showed ubiquinone-10 as predominant respiratory quinone and C(18 : 1)ω7c, 11-methyl C(18 : 1)ω7c, C(16 : 0), C(12 : 0) 3-OH and C(16 : 0) 2-OH as major fatty acids. The genomic DNA G+C content was 63.5 mol%. Comparative 16S rRNA gene sequence analysis revealed that the isolate belongs to the genus Ruegeria. Strain ZH17(T) exhibited the closest phylogenetic affinity to the type strain of Ruegeria pomeroyi, with 97.2 % sequence similarity, and less than 97 % sequence similarity with respect to other described species of the genus Ruegeria. The DNA-DNA reassociation value between strain ZH17(T) and R. pomeroyi DSM 15171(T) was 50.7 %. On the basis of phenotypic and genotypic data, strain ZH17(T) represents a novel species of the genus Ruegeria, for which the name Ruegeria marina sp. nov. (type strain ZH17(T) =CGMCC 1.9108(T) =JCM 16262(T)) is proposed.

  9. Sexual Recruitment in Zostera marina: Progress toward a Predictive Model.

    PubMed

    Furman, Bradley T; Peterson, Bradley J

    2015-01-01

    Ecophysiological stress and physical disturbance are capable of structuring meadows through a combination of direct biomass removal and recruitment limitation; however, predicting these effects at landscape scales has rarely been successful. To model environmental influence on sexual recruitment in perennial Zostera marina, we selected a sub-tidal, light-replete study site with seasonal extremes in temperature and wave energy. During an 8-year observation period, areal coverage increased from 4.8 to 42.7%. Gains were stepwise in pattern, attributable to annual recruitment of patches followed by centrifugal growth and coalescence. Recruitment varied from 13 to 4,894 patches per year. Using a multiple linear regression approach, we examined the association between patch appearance and relative wave energy, atmospheric condition and water temperature. Two models were developed, one appropriate for the dispersal of naked seeds, and another for rafted flowers. Results indicated that both modes of sexual recruitment varied as functions of wind, temperature, rainfall and wave energy, with a regime shift in wind-wave energy corresponding to periods of rapid colonization within our site. Temporal correlations between sexual recruitment and time-lagged climatic summaries highlighted floral induction, seed bank and small patch development as periods of vulnerability. Given global losses in seagrass coverage, regions of recovery and re-colonization will become increasingly important. Lacking landscape-scale process models for seagrass recruitment, temporally explicit statistical approaches presented here could be used to forecast colonization trajectories and to provide managers with real-time estimates of future meadow performance; i.e., when to expect a good year in terms of seagrass expansion. To facilitate use as forecasting tools, we did not use statistical composites or normalized variables as our predictors. This study, therefore, represents a first step toward linking

  10. Citreicella marina sp. nov., isolated from deep-sea sediment.

    PubMed

    Lai, Qiliang; Fu, Yuanyuan; Wang, Jianning; Chen, Shuangxi; Zhong, Huanzi; Sun, Fengqin; Shao, Zongze

    2011-04-01

    A taxonomic study was carried out on a novel strain, designated CK-I3-6(T), which was isolated from deep-sea sediment of the south-west Indian Ocean Ridge. Cells were Gram-reaction-negative, oxidase- and catalase-positive, rod-shaped and non-motile. Growth was observed at 4-38 °C and in 1-12 % (w/v) NaCl. Cells were able to degrade gelatin and oxidize thiosulfate but did not reduce nitrate. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain CK-I3-6(T) belonged to the genus Citreicella with a sequence similarity of 97.3 % to Citreicella thiooxidans CHLG 1(T), while similarities with other taxa were <95.7 %. DNA-DNA hybridization showed that strain CK-I3-6(T) and C. thiooxidans CHLG 1(T) showed a low DNA-DNA relatedness (48±3 %). The principal fatty acids were C(16 : 0) (7.8 %), C(18 : 1)ω7c (66.6 %), summed feature 3 (C(16 : 1)ω6c and/or C(16 : 1)ω7c; 6.3 %) and C(19 : 0)ω8c cyclo (10.0 %). The chromosomal DNA G+C content was 67.5 mol%. On the basis of the combined genotypic and phenotypic data, strain CK-I3-6(T) represents a novel species of the genus Citreicella, for which the name Citreicella marina sp. nov. is proposed. The type strain is CK-I3-6(T) ( = CCTCC AB 209064(T)  = LMG 25230(T)  = MCCC 1A03060(T)).

  11. Isoflurane, sevoflurane and desflurane use in cane toads (Rhinella marina)

    PubMed Central

    Morrison, Kaleigh E.; Strahl-Heldreth, Danielle; Clark-Price, Stuart C.

    2016-01-01

    Anaesthetic chamber concentrations of isoflurane, sevoflurane and desflurane that resulted in loss of righting reflex within 15 minutes in 50 per cent of toads (Rhinella marina) exposed (ED50-LRR<15MIN) were identified. The median and range ED50-LRR<15MIN was 1.4 (0.9–1.4) per cent for isoflurane, 1.75 (1.1–1.9) per cent for sevoflurane and 4.4 (4.3–5.5) per cent for desflurane. Subsequently, toads were exposed to 1.5 times the ED50-LRR<15MIN and times to loss and return of righting reflex were identified. All toads for all anaesthetics lost righting reflex. The median and range loss of righting reflex was 4:00 (3:00–5:30) minutes for isoflurane, 4:45 (3:30–7:00) minutes for sevoflurane, and 4:15 (4:00–5:30) minutes for desflurane and was not different between anaesthetics. Time to return of righting reflex was 175 (123–211) minutes for isoflurane, 192 (116–383) minutes for sevoflurane and 74 (52–220) minutes for desflurane. Time to return of righting reflex was significantly shorter for desflurane compared with isoflurane or sevoflurane. The use of isoflurane, sevoflurane or desflurane can be used to provide immobilisation to cane toads and potentially other anurans. Induction times are likely similar when using an anaesthetic chamber to provide anaesthesia. However recovery time may take twice as long when utilising isoflurane or sevoflurane over desflurane. PMID:27651914

  12. Sexual Recruitment in Zostera marina: Progress toward a Predictive Model

    PubMed Central

    2015-01-01

    Ecophysiological stress and physical disturbance are capable of structuring meadows through a combination of direct biomass removal and recruitment limitation; however, predicting these effects at landscape scales has rarely been successful. To model environmental influence on sexual recruitment in perennial Zostera marina, we selected a sub-tidal, light-replete study site with seasonal extremes in temperature and wave energy. During an 8-year observation period, areal coverage increased from 4.8 to 42.7%. Gains were stepwise in pattern, attributable to annual recruitment of patches followed by centrifugal growth and coalescence. Recruitment varied from 13 to 4,894 patches per year. Using a multiple linear regression approach, we examined the association between patch appearance and relative wave energy, atmospheric condition and water temperature. Two models were developed, one appropriate for the dispersal of naked seeds, and another for rafted flowers. Results indicated that both modes of sexual recruitment varied as functions of wind, temperature, rainfall and wave energy, with a regime shift in wind-wave energy corresponding to periods of rapid colonization within our site. Temporal correlations between sexual recruitment and time-lagged climatic summaries highlighted floral induction, seed bank and small patch development as periods of vulnerability. Given global losses in seagrass coverage, regions of recovery and re-colonization will become increasingly important. Lacking landscape-scale process models for seagrass recruitment, temporally explicit statistical approaches presented here could be used to forecast colonization trajectories and to provide managers with real-time estimates of future meadow performance; i.e., when to expect a good year in terms of seagrass expansion. To facilitate use as forecasting tools, we did not use statistical composites or normalized variables as our predictors. This study, therefore, represents a first step toward linking

  13. Halogenated Compounds from Marine Algae

    PubMed Central

    Cabrita, Maria Teresa; Vale, Carlos; Rauter, Amélia Pilar

    2010-01-01

    Marine algae produce a cocktail of halogenated metabolites with potential commercial value. Structures exhibited by these compounds go from acyclic entities with a linear chain to complex polycyclic molecules. Their medical and pharmaceutical application has been investigated for a few decades, however other properties, such as antifouling, are not to be discarded. Many compounds were discovered in the last years, although the need for new drugs keeps this field open as many algal species are poorly screened. The ecological role of marine algal halogenated metabolites has somehow been overlooked. This new research field will provide valuable and novel insight into the marine ecosystem dynamics as well as a new approach to comprehending biodiversity. Furthermore, understanding interactions between halogenated compound production by algae and the environment, including anthropogenic or global climate changes, is a challenging target for the coming years. Research of halogenated metabolites has been more focused on macroalgae than on phytoplankton. However, phytoplankton could be a very promising material since it is the base of the marine food chain with quick adaptation to environmental changes, which undoubtedly has consequences on secondary metabolism. This paper reviews recent progress on this field and presents trends on the role of marine algae as producers of halogenated compounds. PMID:20948909

  14. Parasites in algae mass culture.

    PubMed

    Carney, Laura T; Lane, Todd W

    2014-01-01

    Parasites are now known to be ubiquitous across biological systems and can play an important role in modulating algal populations. However, there is a lack of extensive information on their role in artificial ecosystems such as algal production ponds and photobioreactors. Parasites have been implicated in the demise of algal blooms. Because individual mass culture systems often tend to be unialgal and a select few algal species are in wide scale application, there is an increased potential for parasites to have a devastating effect on commercial scale monoculture. As commercial algal production continues to expand with a widening variety of applications, including biofuel, food and pharmaceuticals, the parasites associated with algae will become of greater interest and potential economic impact. A number of important algal parasites have been identified in algal mass culture systems in the last few years and this number is sure to grow as the number of commercial algae ventures increases. Here, we review the research that has identified and characterized parasites infecting mass cultivated algae, the techniques being proposed and or developed to control them, and the potential impact of parasites on the future of the algal biomass industry.

  15. Parasites in algae mass culture

    PubMed Central

    Carney, Laura T.; Lane, Todd W.

    2014-01-01

    Parasites are now known to be ubiquitous across biological systems and can play an important role in modulating algal populations. However, there is a lack of extensive information on their role in artificial ecosystems such as algal production ponds and photobioreactors. Parasites have been implicated in the demise of algal blooms. Because individual mass culture systems often tend to be unialgal and a select few algal species are in wide scale application, there is an increased potential for parasites to have a devastating effect on commercial scale monoculture. As commercial algal production continues to expand with a widening variety of applications, including biofuel, food and pharmaceuticals, the parasites associated with algae will become of greater interest and potential economic impact. A number of important algal parasites have been identified in algal mass culture systems in the last few years and this number is sure to grow as the number of commercial algae ventures increases. Here, we review the research that has identified and characterized parasites infecting mass cultivated algae, the techniques being proposed and or developed to control them, and the potential impact of parasites on the future of the algal biomass industry. PMID:24936200

  16. Synthetic polyester from algae oil.

    PubMed

    Roesle, Philipp; Stempfle, Florian; Hess, Sandra K; Zimmerer, Julia; Río Bártulos, Carolina; Lepetit, Bernard; Eckert, Angelika; Kroth, Peter G; Mecking, Stefan

    2014-06-23

    Current efforts to technically use microalgae focus on the generation of fuels with a molecular structure identical to crude oil based products. Here we suggest a different approach for the utilization of algae by translating the unique molecular structures of algae oil fatty acids into higher value chemical intermediates and materials. A crude extract from a microalga, the diatom Phaeodactylum tricornutum, was obtained as a multicomponent mixture containing amongst others unsaturated fatty acid (16:1, 18:1, and 20:5) phosphocholine triglycerides. Exposure of this crude algae oil to CO and methanol with the known catalyst precursor [{1,2-(tBu2 PCH2)2C6H4}Pd(OTf)](OTf) resulted in isomerization/methoxycarbonylation of the unsaturated fatty acids into a mixture of linear 1,17- and 1,19-diesters in high purity (>99 %). Polycondensation with a mixture of the corresponding diols yielded a novel mixed polyester-17/19.17/19 with an advantageously high melting and crystallization temperature.

  17. Halogenated compounds from marine algae.

    PubMed

    Cabrita, Maria Teresa; Vale, Carlos; Rauter, Amélia Pilar

    2010-08-09

    Marine algae produce a cocktail of halogenated metabolites with potential commercial value. Structures exhibited by these compounds go from acyclic entities with a linear chain to complex polycyclic molecules. Their medical and pharmaceutical application has been investigated for a few decades, however other properties, such as antifouling, are not to be discarded. Many compounds were discovered in the last years, although the need for new drugs keeps this field open as many algal species are poorly screened. The ecological role of marine algal halogenated metabolites has somehow been overlooked. This new research field will provide valuable and novel insight into the marine ecosystem dynamics as well as a new approach to comprehending biodiversity. Furthermore, understanding interactions between halogenated compound production by algae and the environment, including anthropogenic or global climate changes, is a challenging target for the coming years. Research of halogenated metabolites has been more focused on macroalgae than on phytoplankton. However, phytoplankton could be a very promising material since it is the base of the marine food chain with quick adaptation to environmental changes, which undoubtedly has consequences on secondary metabolism. This paper reviews recent progress on this field and presents trends on the role of marine algae as producers of halogenated compounds.

  18. Bioaccumulation of nickel by algae

    SciTech Connect

    Wang, H.K.; Wood, J.M.

    1984-02-01

    Six strains of algae and one Euglena sp. were tested for their ability to bioaccumulate nickel. Radioactive /sup 63/Ni was used together with a microplate technique to determine the conditions for nickel removal by axenic cultures of cyanobacteria, green algae, and one euglenoid. The cyanobacteria tested were found to be more sensitive to nickel toxicity than the green algae or the Euglena sp. The concentration factor (CF) for nickel was determined under a variety of conditions and found to be in the range from 0 to 3.0 x 10/sup 3/. The effect of environmental variables on nickel uptake was examined, and a striking pH effect for biaccumulation was observed, with most of the algal strains accumulating nickel optimally at approximately pH 8.0. Competition experiments for binding sites between nickel and other cations as well as with other complexing anions, showed that /sup 63/Ni uptake was affected only by cobalt and by humic acids.

  19. New species of Parapharyngodon (Nematoda: Pharyngodonidae) in Rhinella marina (Anura: Bufonidae) from Grenada, West Indies

    USGS Publications Warehouse

    Bursey, Charles; Drake, Michael; Cole, Rebecca; Sterner, Mauritz; Pinckney, Rhonda; Zieger, Ulrike

    2013-01-01

    Parapharyngodon grenadaensis n. sp. (Nematoda: Pharyngodonidae) from the large intestine of the cane toad, Rhinella marina, is described and illustrated. Parapharyngodon grenadaensis n. sp. is the 48th species assigned to the genus and the 16th species from the Neotropical region. It differs from other species in the genus by possessing 4 pairs of caudal papillae, an echinate anterior cloacal lip, and a blunt spicule of 67–104 μm. This is only the second report of R. marina harboring a species of Parapharyngodon.

  20. New species of Parapharyngodon (Nematoda: Pharyngodonidae) in Rhinella marina (Anura: Bufonidae) from Grenada, West Indies.

    PubMed

    Bursey, Charles; Drake, Michael; Cole, Rebecca; Sterner Iii, Mauritz; Pinckney, Rhonda; Zieger, Ulrike

    2013-06-01

    Parapharyngodon grenadaensis n. sp. (Nematoda: Pharyngodonidae) from the large intestine of the cane toad, Rhinella marina, is described and illustrated. Parapharyngodon grenadaensis n. sp. is the 48th species assigned to the genus and the 16th species from the Neotropical region. It differs from other species in the genus by possessing 4 pairs of caudal papillae, an echinate anterior cloacal lip, and a blunt spicule of 67-104 μm. This is only the second report of R. marina harboring a species of Parapharyngodon.

  1. Profiling Private Dock and Marina-Slip Holders at Corps of Engineers Projects

    DTIC Science & Technology

    1998-03-01

    Inc. 56 482 538 90 Hartwell Lake Portman Marina 30 500 530 94 Wolf Creek Dam Jamestown Marina 29 500 529 95 Wolf Creek Dam Wolf Creek 0 526 526...provided as Table 2. A greater number of private docks was located on Lake Sidney Lanier than at any other Corps project. As a result, the State of... Georgia records more than 52 percent of all dock permits issued by the Corps —more than all other Corps projects combined. Community-dock permits were

  2. Stochastic Forecasting of Algae Blooms in Lakes

    SciTech Connect

    Wang, Peng; Tartakovsky, Daniel M.; Tartakovsky, Alexandre M.

    2013-01-15

    We consider the development of harmful algae blooms (HABs) in a lake with uncertain nutrients inflow. Two general frameworks, Fokker-Planck equation and the PDF methods, are developed to quantify the resultant concentration uncertainty of various algae groups, via deriving a deterministic equation of their joint probability density function (PDF). A computational example is examined to study the evolution of cyanobacteria (the blue-green algae) and the impacts of initial concentration and inflow-outflow ratio.

  3. Microbial communities in sediment from Zostera marina patches, but not the Z. marina leaf or root microbiomes, vary in relation to distance from patch edge.

    PubMed

    Ettinger, Cassandra L; Voerman, Sofie E; Lang, Jenna M; Stachowicz, John J; Eisen, Jonathan A

    2017-01-01

    Zostera marina (also known as eelgrass) is a foundation species in coastal and marine ecosystems worldwide and is a model for studies of seagrasses (a paraphyletic group in the order Alismatales) that include all the known fully submerged marine angiosperms. In recent years, there has been a growing appreciation of the potential importance of the microbial communities (i.e., microbiomes) associated with various plant species. Here we report a study of variation in Z. marina microbiomes from a field site in Bodega Bay, CA. We characterized and then compared the microbial communities of root, leaf and sediment samples (using 16S ribosomal RNA gene PCR and sequencing) and associated environmental parameters from the inside, edge and outside of a single subtidal Z. marina patch. Multiple comparative approaches were used to examine associations between microbiome features (e.g., diversity, taxonomic composition) and environmental parameters and to compare sample types and sites. Microbial communities differed significantly between sample types (root, leaf and sediment) and in sediments from different sites (inside, edge, outside). Carbon:Nitrogen ratio and eelgrass density were both significantly correlated to sediment community composition. Enrichment of certain taxonomic groups in each sample type was detected and analyzed in regard to possible functional implications (especially regarding sulfur metabolism). Our results are mostly consistent with prior work on seagrass associated microbiomes with a few differences and additional findings. From a functional point of view, the most significant finding is that many of the taxa that differ significantly between sample types and sites are closely related to ones commonly associated with various aspects of sulfur and nitrogen metabolism. Though not a traditional model organism, we believe that Z. marina can become a model for studies of marine plant-microbiome interactions.

  4. Microbial communities in sediment from Zostera marina patches, but not the Z. marina leaf or root microbiomes, vary in relation to distance from patch edge

    PubMed Central

    Ettinger, Cassandra L.; Voerman, Sofie E.; Lang, Jenna M.; Stachowicz, John J.

    2017-01-01

    Background Zostera marina (also known as eelgrass) is a foundation species in coastal and marine ecosystems worldwide and is a model for studies of seagrasses (a paraphyletic group in the order Alismatales) that include all the known fully submerged marine angiosperms. In recent years, there has been a growing appreciation of the potential importance of the microbial communities (i.e., microbiomes) associated with various plant species. Here we report a study of variation in Z. marina microbiomes from a field site in Bodega Bay, CA. Methods We characterized and then compared the microbial communities of root, leaf and sediment samples (using 16S ribosomal RNA gene PCR and sequencing) and associated environmental parameters from the inside, edge and outside of a single subtidal Z. marina patch. Multiple comparative approaches were used to examine associations between microbiome features (e.g., diversity, taxonomic composition) and environmental parameters and to compare sample types and sites. Results Microbial communities differed significantly between sample types (root, leaf and sediment) and in sediments from different sites (inside, edge, outside). Carbon:Nitrogen ratio and eelgrass density were both significantly correlated to sediment community composition. Enrichment of certain taxonomic groups in each sample type was detected and analyzed in regard to possible functional implications (especially regarding sulfur metabolism). Discussion Our results are mostly consistent with prior work on seagrass associated microbiomes with a few differences and additional findings. From a functional point of view, the most significant finding is that many of the taxa that differ significantly between sample types and sites are closely related to ones commonly associated with various aspects of sulfur and nitrogen metabolism. Though not a traditional model organism, we believe that Z. marina can become a model for studies of marine plant-microbiome interactions. PMID

  5. Photobioreactors for mass cultivation of algae.

    PubMed

    Ugwu, C U; Aoyagi, H; Uchiyama, H

    2008-07-01

    Algae have attracted much interest for production of foods, bioactive compounds and also for their usefulness in cleaning the environment. In order to grow and tap the potentials of algae, efficient photobioreactors are required. Although a good number of photobioreactors have been proposed, only a few of them can be practically used for mass production of algae. One of the major factors that limits their practical application in algal mass cultures is mass transfer. Thus, a thorough understanding of mass transfer rates in photobioreactors is necessary for efficient operation of mass algal cultures. In this review article, various photobioreactors that are very promising for mass production of algae are discussed.

  6. Negative effects of blue mussel ( Mytilus edulis) presence in eelgrass ( Zostera marina) beds in Flensborg fjord, Denmark

    NASA Astrophysics Data System (ADS)

    Vinther, Hanne Fogh; Laursen, Jens Sund; Holmer, Marianne

    2008-03-01

    The effect of blue mussel ( Mytilus edulis) presence in eelgrass ( Zostera marina) beds was studied from June 2004 to July 2005 in Flensborg fjord, Denmark. The field experiments were conducted at two stations, one with only Z. marina (Eelgrass station) present and one where M. edulis were present in the Z. marina beds (Mixed station). Zostera marina parameters were measured (growth of leaves, shoot density, leaf length, and nutrient content) in combination with epiphyte cover and sediment parameters (sulphate reduction rates, sediment nutrient fluxes, organic content, C, N and P content) to examine possible positive and negative effects of the mussels on eelgrass performance. The fluxes of ammonium from the sediments were stimulated at all sampling dates at the Mixed station, and possibly stimulated epiphyte growth at this station. Further 15N signals in epiphytes from the Mixed station suggested that excretion products from the mussels were important nitrogen sources at this station. Sulphate reduction rates were enhanced at the Mixed station and also sediment sulphide concentrations increased under mussel influence, which may have resulted in sulphide toxicity and decreased growth of Z. marina at this station. The study indicates that for Z. marina beds in Flensborg Fjord the effects of M. edulis in seagrass beds are primarily negative, and raises the question whether this leads to negative effects on the stability and expansion of Z. marina beds.

  7. ESCHERICHIA COLI AND TOTAL COLIFORMS IN WATER AND SEDIMENTS AT LAKE MARINAS

    EPA Science Inventory

    Escherichia coli, a fecal coliform, and total coliforms were monitored between September 1999 to October 2001 in five marinas on Lake Texoma, located on the Oklahoma and Texas border. General trend was that densities of E. coli were lower in the summer season due to the lower ...

  8. 76 FR 18391 - Safety Zone; Texas International Boat Show Power Boat Races; Corpus Christi Marina, Corpus...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-04-04

    ... Races; Corpus Christi Marina, Corpus Christi, TX AGENCY: Coast Guard, DHS. ACTION: Temporary final rule... American Tri-Hull Championship will consist of a series of power boat races for approximately 8-12 vessels that are 18-feet long. The temporary safety zone is necessary for the safety of race participants...

  9. Population structure and genetic diversity among eelgrass (Zostera marina) beds and depths in San Francisco Bay.

    PubMed

    Ort, Brian S; Cohen, C Sarah; Boyer, Katharyn E; Wyllie-Echeverria, Sandy

    2012-07-01

    The seagrass Zostera marina is widely distributed in coastal regions throughout much of the northern hemisphere, forms the foundation of an important ecological habitat, and is suffering population declines. Studies in the Atlantic and Pacific oceans indicate that the degree of population genetic differentiation is location dependent. San Francisco Bay, California, USA, is a high-current, high-wind environment where rafting of seed-bearing shoots has the potential to enhance genetic connectivity among Z. marina populations. We tested Z. marina from six locations, including one annual population, within the bay to assess population differentiation and to compare levels of within-population genetic diversity. Using 7 microsatellite loci, we found significant differentiation among all populations. The annual population had significantly higher clonal diversity than the others but showed no detectible differences in heterozygosity or allelic richness. There appears to be sufficient input of genetic variation through sexual reproduction or immigration into the perennial populations to prevent significant declines in the number and frequency of alleles. In additional depth comparisons, we found differentiation among deep and shallow portions in 1 of 3 beds evaluated. Genetic drift, sweepstakes recruitment, dispersal limitation, and possibly natural selection may have combined to produce genetic differentiation over a spatial scale of 3-30 km in Z. marina. This implies that the scale of genetic differentiation may be smaller than expected for seagrasses in other locations too. We suggest that populations in close proximity may not be interchangeable for use as restoration material.

  10. OCCURRENCE OF METYL TERT-BUTYL ETHER (MTBE) AT FIVE MARINAS IN LAKE TEXOMA

    EPA Science Inventory



    Occurrence of methyl tert-butyl ether (MTBE) in five marinas was monitored between June 1999 and November 2000 in Lake Texoma located on the border of Oklahoma and Texas. MTBE is a commonly used gasoline additive and a suspected carcinogen. Lake water was collected at loc...

  11. 77 FR 21868 - Safety Zone; Marina Salvage, Bellingham Bay, Bellingham, WA

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-04-12

    ..., WA AGENCY: Coast Guard, DHS. ACTION: Temporary final rule. SUMMARY: The Coast Guard is establishing a safety zone in and around the Squalicum Harbor Marina, located in Bellingham, WA. This action is... necessary to protect vessels, persons and law enforcement vessels in ] Bellingham, WA, from hazards created...

  12. Biochemical characterization of the eelgrass Zostera marina at its southern distribution limit in the North Pacific

    USGS Publications Warehouse

    Cabello-Pasini, Alejandro; Munoz-Salazar, R.; Ward, D.H.

    2004-01-01

    The eelgrass Zostera marina L. is distributed along the Baja California Peninsula (Mexico) where it is exposed to a wide range of irradiances and temperatures that could promote changes in its biochemical composition. Consequently, the objective of this study was to characterize the variations in the levels of chlorophyll, carbohydrates, proteins, fiber, ash and calories in the shoots of Z. marina from the north (San Quintin) and south (Ojo de Liebre and San Ignacio lagoons) of the peninsula. Temperature in the southern lagoons was 5-6??C higher than in the northern lagoon; likewise, in situ irradiance was two-fold greater in the south than in the north. As a result of the lower irradiance levels, the concentration of chlorophyll in the shoots of Z. marina was twice as high (1.7 mg gWW-1) in the northern lagoon than in the southern ones (0.8 mg gWW-1). Similar to chlorophyll levels, the concentration of soluble carbohydrates in the shoots was greater in the northern lagoon than in the southern ones, suggesting that the high levels of chlorophyll are enough to compensate for the low irradiance levels and to maintain a positive carbon balance at San Quintin. On the other hand, the levels of proteins in the shoots from the north of the peninsula were slightly lower than those from the southern populations. In general, these results suggest that the different environmental conditions to which Z. marina is exposed along the peninsula impact its biochemical composition.

  13. 18 CFR 1304.403 - Marina sewage pump-out stations and holding tanks.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... pump-out facilities to shore-based treatment plants or intermediate transfer facilities; (j) A reliable... 18 Conservation of Power and Water Resources 2 2014-04-01 2014-04-01 false Marina sewage pump-out stations and holding tanks. 1304.403 Section 1304.403 Conservation of Power and Water Resources TENNESSEE...

  14. 18 CFR 1304.403 - Marina sewage pump-out stations and holding tanks.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... pump-out facilities to shore-based treatment plants or intermediate transfer facilities; (j) A reliable... 18 Conservation of Power and Water Resources 2 2012-04-01 2012-04-01 false Marina sewage pump-out stations and holding tanks. 1304.403 Section 1304.403 Conservation of Power and Water Resources TENNESSEE...

  15. 18 CFR 1304.403 - Marina sewage pump-out stations and holding tanks.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... pump-out facilities to shore-based treatment plants or intermediate transfer facilities; (j) A reliable... 18 Conservation of Power and Water Resources 2 2013-04-01 2012-04-01 true Marina sewage pump-out stations and holding tanks. 1304.403 Section 1304.403 Conservation of Power and Water Resources TENNESSEE...

  16. EFFECTS OF EROSION AND MACROALGAE ON INTERTIDAL EELGRASS (ZOSTERA MARINA) IN A NORTHEASTERN PACIFIC ESTUARY (USA)

    EPA Science Inventory

    Eelgrass (Zostera marina) in open-coast northeastern Pacific estuaries is primarily intertidal, yet little research has been done on the natural factors controlling its upper intertidal growth limits. This two-year study in the Yaquina Estuary (Newport, Oregon, USA) evaluated the...

  17. ESCHERICHIA COLI AND TOTAL COLIFORMS IN WATER AND SEDIMENTS AT LAKE MARINAS

    EPA Science Inventory

    Escherichia coli, a fecal coliform, and total coliforms were monitored between September 1999 to October 2001 in five marinas on Lake Texoma, located on the Oklahoma and Texas border. General trend was that densities of E. coli were lower in the summer season due to the lower ...

  18. 76 FR 38020 - Safety Zone; Bay Point Fireworks, Bay Point Marina; Marblehead, OH

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-29

    ... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; Bay Point Fireworks, Bay Point Marina.... This Zone is intended to restrict vessels from portions of Lake Erie for the Bay Point Fireworks. This... fireworks displays. DATES: This regulation is effective from 10 p.m. on July 2, 2011 through 10:20 p.m....

  19. OCCURRENCE OF METYL TERT-BUTYL ETHER (MTBE) AT FIVE MARINAS IN LAKE TEXOMA

    EPA Science Inventory



    Occurrence of methyl tert-butyl ether (MTBE) in five marinas was monitored between June 1999 and November 2000 in Lake Texoma located on the border of Oklahoma and Texas. MTBE is a commonly used gasoline additive and a suspected carcinogen. Lake water was collected at loc...

  20. EFFECTS OF EROSION AND MACROALGAE ON INTERTIDAL EELGRASS (ZOSTERA MARINA) IN A NORTHEASTERN PACIFIC ESTUARY (USA)

    EPA Science Inventory

    Eelgrass (Zostera marina) in open-coast northeastern Pacific estuaries is primarily intertidal, yet little research has been done on the natural factors controlling its upper intertidal growth limits. This two-year study in the Yaquina Estuary (Newport, Oregon, USA) evaluated the...

  1. 33 CFR 162.200 - Marina del Rey, Calif.; restricted area.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 2 2010-07-01 2010-07-01 false Marina del Rey, Calif.; restricted area. 162.200 Section 162.200 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) PORTS AND WATERWAYS SAFETY INLAND WATERWAYS NAVIGATION REGULATIONS § 162.200...

  2. 33 CFR 162.200 - Marina del Rey, Calif.; restricted area.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 2 2011-07-01 2011-07-01 false Marina del Rey, Calif.; restricted area. 162.200 Section 162.200 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) PORTS AND WATERWAYS SAFETY INLAND WATERWAYS NAVIGATION REGULATIONS § 162.200...

  3. The cane or marine toad, Rhinella marina (Anura, Bufonidae): two genetically and morphologically distinct species.

    PubMed

    Acevedo, Aldemar A; Lampo, Margarita; Cipriani, Roberto

    2016-04-18

    Rhinella marina is a Neotropical toad that has been introduced widely worldwide. Its toxic effects to frog-eating predators threaten the native and domestic fauna of some regions where it has been introduced. Despite previous studies suggesting two genetically distinct cryptic species within R. marina, one east and one west of the Andes, its taxonomic status remained unresolved due to the absence of morphological complementary evidence. For the first time, data from two mitochondrial genes (ND3 and CR) and 23 morphometric landmarks are combined to evaluate the taxonomic status of this species. Our results support the hypothesis of two separate evolutionary lineages within R. marina and demonstrate that these lineages have significantly diverged in skull shape. We identified two distinct morphotypes, one eastern and one Andean western, with no overlapping morphospaces. The geographic pattern of genetic variation was consistent with a stable structured population with no evidence of recent demographic or geographic expansions. The concordance between the observed geographic patterns in morphometric and genic traits calls for the recognition of two species under R. marina name.

  4. [Adaptability of mangrove Avicennia marina seedlings to simulated tide-inundated times].

    PubMed

    Liao, Bao-wen; Qiu, Feng-ying; Zhang, Liu-en; Han, Jing; Guan, Wei

    2010-05-01

    A laboratory test on the effects of differents simulated tide-inundated times with 2, 4, 6, 8, 10, 12, 14, 16, 18, 20, 22, 24 h x d(-1) on the growth of Avicennia marina seedlings was conducted. The ten growth information indices including chlorophyll, root vigor, growth, biomass and photosynthetic rate were mensurated. The principal components analysis was made combining the ten growth information indices. The 210 d experimental results showed that the chlorophyll, root vigor, growth and biomass would rise first and then fall as the extension of the inundate time; and they changed suddenly at the threshold inundate time 16 h x d(-1). The growth and biomass of Avicennia marina seedlings with more than 16 hours tide-inundated time per day were less than them with no more than 16 hours tide-inundated time per day. The maximum value of stem increment each month, leaf blade increment each month, dry weight of stem, dry weight of root and total biomass were under the 10 hours tide-inundated time per day. It concluded that Avicennia marina seedlings would grow adaptively with less than 16 hours tide-inundated time per day, 8-12 hours of tide-inundated time per day is the most suitable for the growth of Avicennia marina seedlings, while 16 h x d(-1) is a critical tide-inundated time when the plant responded to be obviously inadaptable.

  5. ["Depilation" by micro-algae?].

    PubMed

    Ditrich, H

    1996-01-01

    Itching, reddening and depilation of body hairs was reported by swimmers in the Attersee-lake in Austria. Initially, an environmental crime was suspected. However, further investigations showed that a biological cause was probably responsible for these symptoms. The accrustations found on body hairs turned out in the scanning electron microscope to be dried mucus containing numerous diatoms. The prevailing micro-algae were identified as Cyclotella comensis. Thus, although the phenomenon had a natural, harmless cause, it may happen again given the appropriate environmental conditions.

  6. Engineered antifouling microtopographies: the role of Reynolds number in a model that predicts attachment of zoospores of Ulva and cells of Cobetia marina.

    PubMed

    Magin, Chelsea M; Long, Christopher J; Cooper, Scott P; Ista, Linnea K; López, Gabriel P; Brennan, Anthony B

    2010-08-01

    A correlation between the attachment density of cells from two phylogenetic groups (prokaryotic Bacteria and eukaryotic Plantae), with surface roughness is reported for the first time. The results represent a paradigm shift in the understanding of cell attachment, which is a critical step in the biofouling process. The model predicts that the attachment densities of zoospores of the green alga, Ulva, and cells of the marine bacterium, Cobetia marina, scale inversely with surface roughness. The size and motility of the bacterial cells and algal spores were incorporated into the attachment model by multiplying the engineered roughness index (ERI(II)), which is a representation of surface energy, by the Reynolds number (Re) of the cells. The results showed a negative linear correlation of normalized, transformed attachment density for both organisms with ERI(II) x Re (R(2) = 0.77). These studies demonstrate for the first time that organisms respond in a uniform manner to a model, which incorporates surface energy and the Reynolds number of the organism.

  7. Transcriptome sequencing and analysis of leaf tissue of Avicennia marina using the Illumina platform.

    PubMed

    Huang, Jianzi; Lu, Xiang; Zhang, Wanke; Huang, Rongfeng; Chen, Shouyi; Zheng, Yizhi

    2014-01-01

    Avicennia marina is a widely distributed mangrove species that thrives in high-salinity habitats. It plays a significant role in supporting coastal ecosystem and holds unique potential for studying molecular mechanisms underlying ecological adaptation. Despite and sometimes because of its numerous merits, this species is facing increasing pressure of exploitation and deforestation. Both study on adaptation mechanisms and conservation efforts necessitate more genomic resources for A. marina. In this study, we used Illumina sequencing of an A. marina foliar cDNA library to generate a transcriptome dataset for gene and marker discovery. We obtained 40 million high-quality reads and assembled them into 91,125 unigenes with a mean length of 463 bp. These unigenes covered most of the publicly available A. marina Sanger ESTs and greatly extended the repertoire of transcripts for this species. A total of 54,497 and 32,637 unigenes were annotated based on homology to sequences in the NCBI non-redundant and the Swiss-prot protein databases, respectively. Both Gene Ontology (GO) analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis revealed some transcriptomic signatures of stress adaptation for this halophytic species. We also detected an extraordinary amount of transcripts derived from fungal endophytes and demonstrated the utility of transcriptome sequencing in surveying endophyte diversity without isolating them out of plant tissues. Additionally, we identified 3,423 candidate simple sequence repeats (SSRs) from 3,141 unigenes with a density of one SSR locus every 8.25 kb sequence. Our transcriptomic data will provide valuable resources for ecological, genetic and evolutionary studies in A. marina.

  8. Transcriptome Sequencing and Analysis of Leaf Tissue of Avicennia marina Using the Illumina Platform

    PubMed Central

    Zhang, Wanke; Huang, Rongfeng; Chen, Shouyi; Zheng, Yizhi

    2014-01-01

    Avicennia marina is a widely distributed mangrove species that thrives in high-salinity habitats. It plays a significant role in supporting coastal ecosystem and holds unique potential for studying molecular mechanisms underlying ecological adaptation. Despite and sometimes because of its numerous merits, this species is facing increasing pressure of exploitation and deforestation. Both study on adaptation mechanisms and conservation efforts necessitate more genomic resources for A. marina. In this study, we used Illumina sequencing of an A. marina foliar cDNA library to generate a transcriptome dataset for gene and marker discovery. We obtained 40 million high-quality reads and assembled them into 91,125 unigenes with a mean length of 463 bp. These unigenes covered most of the publicly available A. marina Sanger ESTs and greatly extended the repertoire of transcripts for this species. A total of 54,497 and 32,637 unigenes were annotated based on homology to sequences in the NCBI non-redundant and the Swiss-prot protein databases, respectively. Both Gene Ontology (GO) analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis revealed some transcriptomic signatures of stress adaptation for this halophytic species. We also detected an extraordinary amount of transcripts derived from fungal endophytes and demonstrated the utility of transcriptome sequencing in surveying endophyte diversity without isolating them out of plant tissues. Additionally, we identified 3,423 candidate simple sequence repeats (SSRs) from 3,141 unigenes with a density of one SSR locus every 8.25 kb sequence. Our transcriptomic data will provide valuable resources for ecological, genetic and evolutionary studies in A. marina. PMID:25265387

  9. Chapter F. The Loma Prieta, California, Earthquake of October 17, 1989 - Marina District

    USGS Publications Warehouse

    O'Rourke, Thomas D.

    1992-01-01

    During the earthquake, a total land area of about 4,300 km2 was shaken with seismic intensities that can cause significant damage to structures. The area of the Marina District of San Francisco is only 4.0 km2--less than 0.1 percent of the area most strongly affected by the earthquake--but its significance with respect to engineering, seismology, and planning far outstrips its proportion of shaken terrain and makes it a centerpiece for lessons learned from the earthquake. The Marina District provides perhaps the most comprehensive case history of seismic effects at a specific site developed for any earthquake. The reports assembled in this chapter, which provide an account of these seismic effects, constitute a unique collection of studies on site, as well as infrastructure and societal, response that cover virtually all aspects of the earthquake, ranging from incoming ground waves to the outgoing airwaves used for emergency communication. The Marina District encompasses the area bounded by San Francisco Bay on the north, the Presidio on the west, and Lombard Street and Van Ness Avenue on the south and east, respectively. Nearly all of the earthquake damage in the Marina District, however, occurred within a considerably smaller area of about 0.75 km2, bounded by San Francisco Bay and Baker, Chestnut, and Buchanan Streets. At least five major aspects of earthquake response in the Marina District are covered by the reports in this chapter: (1) dynamic site response, (2) soil liquefaction, (3) lifeline performance, (4) building performance, and (5) emergency services.

  10. Establishment of Avicennia marina mangroves on accreting coastline at Sungai Haji Dorani, Selangor, Malaysia

    NASA Astrophysics Data System (ADS)

    Tamin, Noraini Mohd.; Zakaria, Rozainah; Hashim, Roslan; Yin, Yu

    2011-10-01

    Avicennia marina saplings were established within a restoration area at Sg. Hj. Dorani, Malaysia between May and August 2010. Sapling establishment was achieved following the construction of segmented and hard breakwater as mitigating measure against coastal erosion. Geostructures known as brush faschines were installed within the restoration area as secondary sediment and seed traps. There was a steady increase in the sand content of the soil from 5% in November 2008 to 18% in May 2010. The dominant soil content was silt but it fluctuated and declined slightly over the same period, between 80% in November 2008 and 72% in May 2010. The accreting shoreline behind the breakwater had stabilised within 18 months. Subsequently, the first batch of A. marina wild seedlings or wildings was established on the mud surface in September 2009. Only about 10% of these wildings survived and showed high survival rate (90%) over the next eight months. Wildings that were naturally established near mother trees showed good growth performance. No wilding was established after the fruiting season in August 2010 as all seeds that were dispersed into the restoration area were washed away by September 2010. Tall, A. marina wild saplings (1 m) planted within the restoration area showed higher survival rate (80%) compared to planted saplings of Rhizophora apiculata (30%). Final planting of a thousand 1 m tall A. marina wild saplings was carried out from June 2010, in clumps of 20 and in 1 m × 1 m spacing. By the end of September 2010 clusters of regenerating A. marina mangroves about 1.5 m tall were successfully established on the accreting coastline.

  11. Influence of model selection on the predicted distribution of the seagrass Zostera marina

    NASA Astrophysics Data System (ADS)

    Downie, Anna-Leena; von Numers, Mikael; Boström, Christoffer

    2013-04-01

    There is an increasing need to model the distribution of species and habitats for effective conservation planning, but there is a paucity of models for the marine environment. We used presence (131) and absence (219) records of the marine angiosperm Zostera marina L. from the archipelago of SW Finland, northern Baltic Sea, to model its distribution in a 5400 km2 area. We used depth, slope, turbidity, wave exposure and distance to sandy shores as environmental predictors, and compared a presence-absence method: generalised additive model (GAM), with a presence only method: maximum entropy (Maxent). Models were validated using semi-independent data sets. Both models performed well and described the niche of Z. marina fairly consistently, although there were differences in the way the models weighted the environmental variables, and consequently the spatial predictions differed somewhat. A notable outcome from the process was that with relatively equal model performance, the area actually predicted in geographical space can vary by twofold. The area predicted as suitable for Z. marina by the ensemble was almost half of that predicted by the GAM model by itself. The ensemble of model predictions increased the model predictive capability marginally and clearly shifted the model towards a more conservative prediction, increasing specificity, but at the same time sacrificing sensitivity. The environmental predictors selected into the final models described the potential distribution of Z. marina well and showed that in the northern Baltic the species occupies a narrow niche, typically thriving in shallow and moderately exposed to exposed locations near sandy shores. We conclude that a prediction based on a combination of model results provides a more realistic estimate of the core area suitable for Z. marina and should be the modelling approach implemented in conservation planning and management.

  12. Hydroxyl radical generation by red tide algae.

    PubMed

    Oda, T; Akaike, T; Sato, K; Ishimatsu, A; Takeshita, S; Muramatsu, T; Maeda, H

    1992-04-01

    The unicellular marine phytoplankton Chattonella marina is known to have toxic effects against various living marine organisms, especially fishes. However, details of the mechanism of the toxicity of this plankton remain obscure. Here we demonstrate the generation of superoxide and hydroxyl radicals from a red tide unicellular organism, C. marina, by using ESR spectroscopy with the spin traps 5,5-dimethyl-1-pyrroline-N-oxide (DMPO) and N-t-butyl-alpha-phenylnitrone (PBN), and by using the luminol-enhanced chemiluminescence response. The spin-trapping assay revealed productions of spin adduct of superoxide anion (O2-) (DMPO-OOH) and that of hydroxyl radical (.OH) (DMPO-OH) in the algal suspension, which was not observed in the ultrasonic-ruptured suspension. The addition of superoxide dismutase (500 U/ml) almost completely inhibited the formation of both DMPO-OOH and DMPO-OH, and carbon-centered radicals were generated with the disappearance of DMPO-OH after addition of 5% dimethyl sulfoxide (Me2SO) and 5% ethanol. Furthermore, the generation of methyl and methoxyl radicals, which are thought to be produced by the reaction of hydroxyl radical and Me2SO under aerobic condition, was identified using spin trapping with a combination of PBN and Me2SO. Luminol-enhanced chemiluminescence assay also supported the above observations. These results clearly indicate that C. marina generates and releases the superoxide radical followed by the production of hydroxyl radical to the surrounding environment. The velocity of superoxide generation by C. marina was about 100 times faster than that by mammalian phagocytes per cell basis. The generation of oxygen radical is suggested to be a pathogenic principle in the toxication of red tide to susceptible aquaculture fishes and may be directly correlated with the coastal pollution by red tide.

  13. Cultivation of macroscopic marine algae

    SciTech Connect

    Ryther, J.H.

    1982-11-01

    The red alga Gracilaria tikvahiae may be grown outdoors year-round in central Florida with yields averaging 35.5 g dry wt/m/sup 2/.day, greater than the most productive terrestrial plants. This occurs only when the plants are in a suspended culture, with vigorous aeration and an exchange of 25 or more culture volumes of enriched seawater per day, which is not cost-effective. A culture system was designed in which Gracilaria, stocked at a density of 2 kg wet wt/m/sup 2/, grows to double its biomass in one to two weeks; it is then harvested to its starting density, and anaerobically digested to methane. The biomass is soaked for 6 hours in the digester residue, storing enough nutrients for two weeks' growth in unenriched seawater. The methane is combusted for energy and the waste gas is fed to the culture to provide mixing and CO/sub 2/, eliminating the need for aeration and seawater exchange. The green alga Ulva lactuca, unlike Gracilaria, uses bicarbonate as a photosynthesis carbon source, and can grow at high pH, with little or no free CO/sub 2/. It can therefore produce higher yields than Gracilaria in low water exchange conditions. It is also more efficiently converted to methane than is Gracilaria, but cannot tolerate Florida's summer temperatures so cannot be grown year-round. Attempts are being made to locate or produce a high-temperature tolerant strain.

  14. Take a Dip! Culturing Algae Is Easy.

    ERIC Educational Resources Information Center

    James, Daniel E.

    1983-01-01

    Describes laboratory activities using algae as the organisms of choice. These include examination of typical algal cells, demonstration of alternation of generations, sexual reproduction in Oedogonium, demonstration of phototaxis, effect of nitrate concentration on Ankistrodesmus, and study of competition between two algae in the same environment.…

  15. SSMILes: Measuring the Nutrient Tolerance of Algae.

    ERIC Educational Resources Information Center

    Hedgepeth, David J.

    1995-01-01

    Presents an activity integrating mathematics and science intended to introduce students to the use of metric measurement of mass as a way to increase the meaningfulness of observations about variables in life sciences. Involves measuring the nutrient tolerance of algae. Contains a reproducible algae nutrient graph. (Author/MKR)

  16. Take a Dip! Culturing Algae Is Easy.

    ERIC Educational Resources Information Center

    James, Daniel E.

    1983-01-01

    Describes laboratory activities using algae as the organisms of choice. These include examination of typical algal cells, demonstration of alternation of generations, sexual reproduction in Oedogonium, demonstration of phototaxis, effect of nitrate concentration on Ankistrodesmus, and study of competition between two algae in the same environment.…

  17. Nutritional And Taste Characteristics Of Algae

    NASA Technical Reports Server (NTRS)

    Karel, M.; Nakhost, Z.

    1992-01-01

    Report describes investigation of chemical composition of blue-green algae Synechococcus 6311, as well as preparation of protein isolate from green alga Scenedesmus obliquus and incorporation into variety of food products evaluated for taste. Part of program to investigate growth of microalgae aboard spacecraft for use as food.

  18. SSMILes: Measuring the Nutrient Tolerance of Algae.

    ERIC Educational Resources Information Center

    Hedgepeth, David J.

    1995-01-01

    Presents an activity integrating mathematics and science intended to introduce students to the use of metric measurement of mass as a way to increase the meaningfulness of observations about variables in life sciences. Involves measuring the nutrient tolerance of algae. Contains a reproducible algae nutrient graph. (Author/MKR)

  19. Effect of Dead Algae on Soil Permeability

    SciTech Connect

    Harvey, R.S.

    2003-02-21

    Since existing basins support heavy growths of unicellular green algae which may be killed by temperature variation or by inadvertent pH changes in waste and then deposited on the basin floor, information on the effects of dead algae on soil permeability was needed. This study was designed to show the effects of successive algal kills on the permeability of laboratory soil columns.

  20. Regulation of Oil Biosynthesis in Algae

    DTIC Science & Technology

    2008-06-25

    genes and mutants are currently under investigation for their potential roles in oil biosynthesis in microalgae . 15. SUBJECT TERMS Target genes for oil ...engineering, transcriptional profile comparison, lipid mutants, microalgae oil biosynthesis, enzymes involved in oil body formation in micro algae 16...addressed by exploring oil (triacylglycerol) biosynthesis in microalgae . Many algae including Chlamydomonas accumulate triacylglycerols when cultures

  1. The fast and slow kinetics of chlorophyll a fluorescence induction in plants, algae and cyanobacteria: a viewpoint.

    PubMed

    Papageorgiou, George C; Tsimilli-Michael, Merope; Stamatakis, Kostas

    2007-01-01

    The light-induced/dark-reversible changes in the chlorophyll (Chl) a fluorescence of photosynthetic cells and membranes in the mus-to-several min time window (fluorescence induction, FI; or Kautsky transient) reflect quantum yield changes (quenching/de-quenching) as well as changes in the number of Chls a in photosystem II (PS II; state transitions). Both relate to excitation trapping in PS II and the ensuing photosynthetic electron transport (PSET), and to secondary PSET effects, such as ion translocation across thylakoid membranes and filling or depletion of post-PS II and post-PS I pools of metabolites. In addition, high actinic light doses may depress Chl a fluorescence irreversibly (photoinhibitory lowering; q(I)). FI has been studied quite extensively in plants an algae (less so in cyanobacteria) as it affords a low resolution panoramic view of the photosynthesis process. Total FI comprises two transients, a fast initial (OPS; for Origin, Peak, Steady state) and a second slower transient (SMT; for Steady state, Maximum, Terminal state), whose details are characteristically different in eukaryotic (plants and algae) and prokaryotic (cyanobacteria) oxygenic photosynthetic organisms. In the former, maximal fluorescence output occurs at peak P, with peak M lying much lower or being absent, in which case the PSMT phases are replaced by a monotonous PT fluorescence decay. In contrast, in phycobilisome (PBS)-containing cyanobacteria maximal fluorescence occurs at M which lies much higher than peak P. It will be argued that this difference is caused by a fluorescence lowering trend (state 1 --> 2 transition) that dominates the FI pattern of plants and algae, and correspondingly by a fluorescence increasing trend (state 2 --> 1 transition) that dominates the FI of PBS-containing cyanobacteria. Characteristically, however, the FI pattern of the PBS-minus cyanobacterium Acaryochloris marina resembles the FI patterns of algae and plants and not of the PBS

  2. Potential biomedical applications of marine algae.

    PubMed

    Wang, Hui-Min David; Li, Xiao-Chun; Lee, Duu-Jong; Chang, Jo-Shu

    2017-11-01

    Functional components extracted from algal biomass are widely used as dietary and health supplements with a variety of applications in food science and technology. In contrast, the applications of algae in dermal-related products have received much less attention, despite that algae also possess high potential for the uses in anti-infection, anti-aging, skin-whitening, and skin tumor treatments. This review, therefore, focuses on integrating studies on algae pertinent to human skin care, health and therapy. The active compounds in algae related to human skin treatments are mentioned and the possible mechanisms involved are described. The main purpose of this review is to identify serviceable algae functions in skin treatments to facilitate practical applications in this high-potential area. Copyright © 2017 Elsevier Ltd. All rights reserved.

  3. Composting of waste algae: a review.

    PubMed

    Han, Wei; Clarke, William; Pratt, Steven

    2014-07-01

    Although composting has been successfully used at pilot scale to manage waste algae removed from eutrophied water environments and the compost product applied as a fertiliser, clear guidelines are not available for full scale algae composting. The review reports on the application of composting to stabilize waste algae, which to date has mainly been macro-algae, and identifies the peculiarities of algae as a composting feedstock, these being: relatively low carbon to nitrogen (C/N) ratio, which can result in nitrogen loss as NH3 and even N2O; high moisture content and low porosity, which together make aeration challenging; potentially high salinity, which can have adverse consequence for composting; and potentially have high metals and toxin content, which can affect application of the product as a fertiliser. To overcome the challenges that these peculiarities impose co-compost materials can be employed. Copyright © 2014 Elsevier Ltd. All rights reserved.

  4. Flocculation of model algae under shear.

    SciTech Connect

    Pierce, Flint; Lechman, Jeremy B.

    2010-11-01

    We present results of molecular dynamics simulations of the flocculation of model algae particles under shear. We study the evolution of the cluster size distribution as well as the steady-state distribution as a function of shear rates and algae interaction parameters. Algal interactions are modeled through a DLVO-type potential, a combination of a HS colloid potential (Everaers) and a yukawa/colloid electrostatic potential. The effect of hydrodynamic interactions on aggregation is explored. Cluster strucuture is determined from the algae-algae radial distribution function as well as the structure factor. DLVO parameters including size, salt concentration, surface potential, initial volume fraction, etc. are varied to model different species of algae under a variety of environmental conditions.

  5. The ice nucleation activity of extremophilic algae.

    PubMed

    Kviderova, Jana; Hajek, Josef; Worland, Roger M

    2013-01-01

    Differences in the level of cold acclimation and cryoprotection estimated as ice nucleation activity in snow algae (Chlamydomonas cf. nivalis and Chloromonas nivalis), lichen symbiotic algae (Trebouxia asymmetrica, Trebouxia erici and Trebouxia glomerata), and a mesophilic strain (Chlamydomonas reinhardti) were evaluated. Ice nucleation activity was measured using the freezing droplet method. Measurements were performed using suspensions of cells of A750 (absorbance at 750 nm) ~ 1, 0.1, 0.01 and 0.001 dilutions for each strain. The algae had lower ice nucleation activity, with the exception of Chloromonas nivalis contaminated by bacteria. The supercooling points of the snow algae were higher than those of lichen photobionts. The supercooling points of both, mesophilic and snow Chlamydomonas strains were similar. The lower freezing temperatures of the lichen algae may reflect either the more extreme and more variable environmental conditions of the original localities or the different cellular structure of the strains examined.

  6. Advances in genetic engineering of marine algae.

    PubMed

    Qin, Song; Lin, Hanzhi; Jiang, Peng

    2012-01-01

    Algae are a component of bait sources for animal aquaculture, and they produce abundant valuable compounds for the chemical industry and human health. With today's fast growing demand for algae biofuels and the profitable market for cosmetics and pharmaceuticals made from algal natural products, the genetic engineering of marine algae has been attracting increasing attention as a crucial systemic technology to address the challenge of the biomass feedstock supply for sustainable industrial applications and to modify the metabolic pathway for the more efficient production of high-value products. Nevertheless, to date, only a few marine algae species can be genetically manipulated. In this article, an updated account of the research progress in marine algal genomics is presented along with methods for transformation. In addition, vector construction and gene selection strategies are reviewed. Meanwhile, a review on the progress of bioreactor technologies for marine algae culture is also revisited.

  7. Streptophyte algae and the origin of embryophytes.

    PubMed

    Becker, Burkhard; Marin, Birger

    2009-05-01

    Land plants (embryophytes) evolved from streptophyte green algae, a small group of freshwater algae ranging from scaly, unicellular flagellates (Mesostigma) to complex, filamentous thalli with branching, cell differentiation and apical growth (Charales). Streptophyte algae and embryophytes form the division Streptophyta, whereas the remaining green algae are classified as Chlorophyta. The Charales (stoneworts) are often considered to be sister to land plants, suggesting progressive evolution towards cellular complexity within streptophyte green algae. Many cellular (e.g. phragmoplast, plasmodesmata, hexameric cellulose synthase, structure of flagellated cells, oogamous sexual reproduction with zygote retention) and physiological characters (e.g. type of photorespiration, phytochrome system) originated within streptophyte algae. Phylogenetic studies have demonstrated that Mesostigma (flagellate) and Chlorokybus (sarcinoid) form the earliest divergence within streptophytes, as sister to all other Streptophyta including embryophytes. The question whether Charales, Coleochaetales or Zygnematales are the sister to embryophytes is still (or, again) hotly debated. Projects to study genome evolution within streptophytes including protein families and polyadenylation signals have been initiated. In agreement with morphological and physiological features, many molecular traits believed to be specific for embryophytes have been shown to predate the Chlorophyta/Streptophyta split, or to have originated within streptophyte algae. Molecular phylogenies and the fossil record allow a detailed reconstruction of the early evolutionary events that led to the origin of true land plants, and shaped the current diversity and ecology of streptophyte green algae and their embryophyte descendants. The Streptophyta/Chlorophyta divergence correlates with a remarkably conservative preference for freshwater/marine habitats, and the early freshwater adaptation of streptophyte algae was a major

  8. Streptophyte algae and the origin of embryophytes

    PubMed Central

    Becker, Burkhard; Marin, Birger

    2009-01-01

    Background Land plants (embryophytes) evolved from streptophyte green algae, a small group of freshwater algae ranging from scaly, unicellular flagellates (Mesostigma) to complex, filamentous thalli with branching, cell differentiation and apical growth (Charales). Streptophyte algae and embryophytes form the division Streptophyta, whereas the remaining green algae are classified as Chlorophyta. The Charales (stoneworts) are often considered to be sister to land plants, suggesting progressive evolution towards cellular complexity within streptophyte green algae. Many cellular (e.g. phragmoplast, plasmodesmata, hexameric cellulose synthase, structure of flagellated cells, oogamous sexual reproduction with zygote retention) and physiological characters (e.g. type of photorespiration, phytochrome system) originated within streptophyte algae. Recent Progress Phylogenetic studies have demonstrated that Mesostigma (flagellate) and Chlorokybus (sarcinoid) form the earliest divergence within streptophytes, as sister to all other Streptophyta including embryophytes. The question whether Charales, Coleochaetales or Zygnematales are the sister to embryophytes is still (or, again) hotly debated. Projects to study genome evolution within streptophytes including protein families and polyadenylation signals have been initiated. In agreement with morphological and physiological features, many molecular traits believed to be specific for embryophytes have been shown to predate the Chlorophyta/Streptophyta split, or to have originated within streptophyte algae. Molecular phylogenies and the fossil record allow a detailed reconstruction of the early evolutionary events that led to the origin of true land plants, and shaped the current diversity and ecology of streptophyte green algae and their embryophyte descendants. Conclusions The Streptophyta/Chlorophyta divergence correlates with a remarkably conservative preference for freshwater/marine habitats, and the early freshwater

  9. Algae inhibition experiment and load characteristics of the algae solution

    NASA Astrophysics Data System (ADS)

    Xiong, L.; Gao, J. X.; Zhang, Y. X.; Yang, Z. K.; Zhang, D. Q.; He, W.

    2016-08-01

    It is necessary to inhibit microbial growth in an industrial cooling water system. This paper has developed a Monopolar/Bipolar polarity high voltage pulser with load adaptability for an algal experimental study. The load characteristics of the Chlorella pyrenoidosa solution were examined, and it was found that the solution load is resistive. The resistance is related to the plate area, concentration, and temperature of the solution. Furthermore, the pulser's treatment actually inhibits the algae cell growth. This article also explores the influence of various parameters of electric pulses on the algal effect. After the experiment, the optimum pulse parameters were determined to be an electric field intensity of 750 V/cm, a pulse width per second of 120μs, and monopolar polarity.

  10. Silicon alleviates cadmium toxicity in Avicennia marina (Forsk.) Vierh. seedlings in relation to root anatomy and radial oxygen loss.

    PubMed

    Zhang, Qiong; Yan, Chongling; Liu, Jingchun; Lu, Haoliang; Wang, Wenyun; Du, Jingna; Duan, Hanhui

    2013-11-15

    The effects of Si on growth, the anatomy of the roots, radial oxygen loss (ROL) and Fe/Mn plaque on the root surface were investigated in Avicennia marina (Forsk.) Vierh. seedlings under Cd stress. Si prompted the growth of seedlings and reduced the Cd concentration in the root, stem and leaf of A. marina. Si prompted the development of the apoplastic barrier in the roots, which may be related to the reduction of Cd uptake. The higher amount of ROL and Mn plaque on the root surface due to Si were also related to the promotion of Cd tolerance in A. marina seedlings. Therefore, it is concluded that the alteration of the anatomy of the roots, the increase of ROL and Mn plaque of A. marina seedlings play an important role in alleviation of Cd toxicity due to Si. Copyright © 2013 Elsevier Ltd. All rights reserved.

  11. A comparative evaluation of biological activities and bioactive compounds of the seagrasses Zostera marina and Zostera noltei from southern Portugal.

    PubMed

    Custódio, Luísa; Laukaityte, Simona; Engelen, Aschwin H; Rodrigues, Maria João; Pereira, Hugo; Vizetto-Duarte, Catarina; Barreira, Luísa; Rodríguez, Hortensia; Alberício, Fernando; Varela, João

    2016-01-01

    This work assessed the antioxidant potential, acetylcholinesterase (AChE) inhibition and the in vitro cytotoxic activity of extracts of the seagrasses Zostera marina and Zostera noltei collected from southern Portugal. The total phenolic contents (TPCs), the rosmarinic acid (RA) concentration (HPLC/DAD) and the fatty acid (FA) profile (GC/MS) are also described. Z. marina had the highest TPC, radical scavenging activity against DPPH radicals and copper chelating activity. Z. noltei had metal chelation capacity to copper and iron ions. None of the species was able to inhibit AChE. Both seagrasses had high levels of polyunsaturated FAs. Z. marina significantly and selectively reduced the viability of tumorous neuronal cells. Z. noltei was highly toxic for the three cell lines tested and was selective against hepatocarcinoma cells at the concentration of 100 μg/mL. RA was the main compound identified in Z. marina, but not in Z. noltei.

  12. Determining bathymetric distributions of the eelgrass Zostera marina L. in three turbid estuaries of the eastern North Pacific coast

    EPA Science Inventory

    Improved methods for determining bathymetric distributions of dominant intertidal plants throughout their estuarine range are needed. Zostera marina is a seagrass native to estuaries of the northeastern Pacific and many other sectors of the world ocean. The technique described ...

  13. Determining bathymetric distributions of the eelgrass Zostera marina L. in three turbid estuaries of the eastern North Pacific coast

    EPA Science Inventory

    Improved methods for determining bathymetric distributions of dominant intertidal plants throughout their estuarine range are needed. Zostera marina is a seagrass native to estuaries of the northeastern Pacific and many other sectors of the world ocean. The technique described ...

  14. In Situ Carbon Stable Isotope Tracer Experiments Elucidate Carbon Translocation Rates and Allocation Patterns in Zostera marina L. (eelgrass)

    EPA Science Inventory

    The intertidal seagrass Zostera marina is an important species that provides critical habitat for a number of estuarine species. Despite its widespread distribution, there is limited information on seasonal patterns of carbon dynamics of plants growing in situ, particularly esti...

  15. EFFECTS OF MICROTOPOGRAPHIC VARIATION ON MORPHOMETRICS AND SURVIVAL OF THE ANNUAL FORM OF THE EELGRASS, ZOSTERA MARINA

    EPA Science Inventory

    We sampled a disjunct population of the annual form of the seagrass Zostera marina occurring in the upper intertidal zone of Yaquina Bay, Oregon to determine whether there are differences in recruitment, growth, survivorship and morphology associated with microtopographic locatio...

  16. In Situ Carbon Stable Isotope Tracer Experiments Elucidate Carbon Translocation Rates and Allocation Patterns in Zostera marina L. (eelgrass)

    EPA Science Inventory

    The intertidal seagrass Zostera marina is an important species that provides critical habitat for a number of estuarine species. Despite its widespread distribution, there is limited information on seasonal patterns of carbon dynamics of plants growing in situ, particularly esti...

  17. Algae biodiesel - a feasibility report

    PubMed Central

    2012-01-01

    Background Algae biofuels have been studied numerous times including the Aquatic Species program in 1978 in the U.S., smaller laboratory research projects and private programs. Results Using Molina Grima 2003 and Department of Energy figures, captial costs and operating costs of the closed systems and open systems were estimated. Cost per gallon of conservative estimates yielded $1,292.05 and $114.94 for closed and open ponds respectively. Contingency scenarios were generated in which cost per gallon of closed system biofuels would reach $17.54 under the generous conditions of 60% yield, 50% reduction in the capital costs and 50% hexane recovery. Price per gallon of open system produced fuel could reach $1.94 under generous assumptions of 30% yield and $0.2/kg CO2. Conclusions Current subsidies could allow biodiesel to be produced economically under the generous conditions specified by the model. PMID:22540986

  18. Analysis of transcriptional regulation and tissue-specific expression of Avicennia marina Plasma Membrane Protein 3 suggests it contributes to Na(+) transport and homoeostasis in A. marina.

    PubMed

    Chidambaram, Rajalakshmi; Venkataraman, Gayatri; Parida, Ajay

    2015-07-01

    Plasma membrane proteins (PMP3) play a role in cation homoeostasis. The 5' flanking sequence of stress inducible, Avicennia marina PMP3 (AmPMP3prom) was transcriptionally fused to (a) GUS or (b) GFP-AmPMP3 and analyzed in transgenic tobacco. Tissue-histochemical GUS and GFP:AmPMP3 localization are co-incident under basal and stress conditions. AmPMP3prom directed GUS activity is highest in roots. Basal transcription is conferred by a 388bp segment upstream of the translation start site. A 463bp distal enhancer in the AmPMP3prom confers enhanced expression under salinity in all tissues and also responds to increases in salinity. The effect of a central, stem-specific negative regulatory region is suppressed by the distal enhancer. The A. marina rhizosphere encounters dynamic changes in salinity at the inter-tidal interface. The complex, tissue-specific transcriptional responsiveness of AmPMP3 to salinity appears to have evolved in response to these changes. Under salinity, guard cell and phloem-specific expression of GFP:AmPMP3 is highly enhanced. Mesophyll, trichomes, bundle sheath, parenchymatous cortex and xylem parenchyma also show GFP:AmPMP3 expression. Cis-elements conferring stress, root and vascular-specific expression are enriched in the AmPMP3 promoter. Pronounced vascular-specific AmPMP3 expression suggests a role in salinity induced Na(+) transport, storage, and secretion in A. marina. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  19. DGDG and Glycolipids in Plants and Algae.

    PubMed

    Kalisch, Barbara; Dörmann, Peter; Hölzl, Georg

    2016-01-01

    Photosynthetic organelles in plants and algae are characterized by the high abundance of glycolipids, including the galactolipids mono- and digalactosyldiacylglycerol (MGDG, DGDG) and the sulfolipid sulfoquinovosyldiacylglycerol (SQDG). Glycolipids are crucial to maintain an optimal efficiency of photosynthesis. During phosphate limitation, the amounts of DGDG and SQDG increase in the plastids of plants, and DGDG is exported to extraplastidial membranes to replace phospholipids. Algae often use betaine lipids as surrogate for phospholipids. Glucuronosyldiacylglycerol (GlcADG) is a further glycolipid that accumulates under phosphate deprived conditions. In contrast to plants, a number of eukaryotic algae contain very long chain polyunsaturated fatty acids of 20 or more carbon atoms in their glycolipids. The pathways and genes for galactolipid and sulfolipid synthesis are largely conserved between plants, Chlorophyta, Rhodophyta and algae with complex plastids derived from secondary or tertiary endosymbiosis. However, the relative contribution of the endoplasmic reticulum- and plastid-derived lipid pathways for glycolipid synthesis varies between plants and algae. The genes for glycolipid synthesis encode precursor proteins imported into the photosynthetic organelles. While most eukaryotic algae contain the plant-like galactolipid (MGD1, DGD1) and sulfolipid (SQD1, SQD2) synthases, the red alga Cyanidioschyzon harbors a cyanobacterium-type DGDG synthase (DgdA), and the amoeba Paulinella, derived from a more recent endosymbiosis event, contains cyanobacterium-type enzymes for MGDG and DGDG synthesis (MgdA, MgdE, DgdA).

  20. Algae Biofuel in the Nigerian Energy Context

    NASA Astrophysics Data System (ADS)

    Elegbede, Isa; Guerrero, Cinthya

    2016-05-01

    The issue of energy consumption is one of the issues that have significantly become recognized as an important topic of global discourse. Fossil fuels production reportedly experiencing a gradual depletion in the oil-producing nations of the world. Most studies have relatively focused on biofuel development and adoption, however, the awareness of a prospect in the commercial cultivation of algae having potential to create economic boost in Nigeria, inspired this research. This study aims at exploring the potential of the commercialization of a different but commonly found organism, algae, in Nigeria. Here, parameters such as; water quality, light, carbon, average temperature required for the growth of algae, and additional beneficial nutrients found in algae were analysed. A comparative cum qualitative review of analysis was used as the study made use of empirical findings on the work as well as the author's deductions. The research explored the cultivation of algae with the two major seasonal differences (i.e. rainy and dry) in Nigeria as a backdrop. The results indicated that there was no significant difference in the contribution of algae and other sources of biofuels as a necessity for bioenergy in Nigeria. However, for an effective sustainability of this prospect, adequate measures need to be put in place in form of funding, provision of an economically-enabling environment for the cultivation process as well as proper healthcare service in the face of possible health hazard from technological processes. Further studies can seek to expand on the potential of cultivating algae in the Harmattan season.

  1. Entamoeba marina n. sp.; a New Species of Entamoeba Isolated from Tidal Flat Sediment of Iriomote Island, Okinawa, Japan.

    PubMed

    Shiratori, Takashi; Ishida, Ken-Ichiro

    2016-05-01

    The genus Entamoeba includes anaerobic lobose amoebae, most of which are parasites of various vertebrates and invertebrates. We report a new Entamoeba species, E. marina n. sp. that was isolated from a sample of tidal flat sediment collected at Iriomote Island, Okinawa, Japan. Trophozoites of E. marina were 12.8-32.1 μm in length and 6.8-15.9 μm in width, whereas the cysts were 8.9-15.8 μm in diam. and contained four nuclei. The E. marina cells contained a rounded nucleus with a small centric karyosome and uniformly arranged peripheral chromatin. Although E. marina is morphologically indistinguishable from other tetranucleated cyst-forming Entamoeba species, E. marina can be distinguished from them based on the combination of molecular phylogenetic analyses using SSU rDNA gene and the difference of collection sites. Therefore, we propose E. marina as a new species of the genus Entamoeba. © 2015 The Author(s) Journal of Eukaryotic Microbiology © 2015 International Society of Protistologists.

  2. Errors When Extracting Oil from Algae

    NASA Astrophysics Data System (ADS)

    Murphy, E.; Treat, R.; Ichiuji, T.

    2014-12-01

    Oil is in popular demand, but the worldwide amount of oil is decreasing and prices for it are steadily increasing. Leading scientists have been working to find a solution of attaining oil in an economically and environmentally friendly way. Researchers at the U.S. Department of Energy's Pacific Northwest National Laboratory (PNNL) have determined that "a small mixture of algae and water can be turned into crude oil in less than an hour" (Sheehan, Duhahay, Benemann, Poessler). There are various ways of growing the algae, such as closed loop and open loop methods, as well as processes of extracting oil, such as hydrothermal liquefaction and the hexane-solvent method. Our objective was to grow the algae (C. reinhardtii) and extract oil from it using NaOH and HCl, because we had easy access to those specific chemicals. After two trials of attempted algae growth, we discovered that a bacteria was killing off the algae. This led us to further contemplation on how this dead algae and bacteria are affecting our environment, and the organisms within it. Eutrophication occurs when excess nutrients stimulate rapid growth of algae in an aquatic environment. This can clog waterways and create algal blooms in blue-green algae, as well as neurotoxic red tide phytoplankton. These microscopic algae die upon consumption of the nutrients in water and are degraded by bacteria. The bacteria respires and creates an acidic environment with the spontaneous conversion of carbon dioxide to carbonic acid in water. This process of degradation is exactly what occurred in our 250 mL flask. When the phytoplankton attacked our algae, it created a hypoxic environment, which eliminated any remaining amounts of oxygen, carbon dioxide, and nutrients in the water, resulting in a miniature dead zone. These dead zones can occur almost anywhere where there are algae and bacteria, such as the ocean, and make it extremely difficult for any organism to survive. This experiment helped us realize the

  3. Method and apparatus for processing algae

    SciTech Connect

    Chew, Geoffrey; Reich, Alton J.; Dykes, Jr., H. Waite; Di Salvo, Roberto

    2012-07-03

    Methods and apparatus for processing algae are described in which a hydrophilic ionic liquid is used to lyse algae cells. The lysate separates into at least two layers including a lipid-containing hydrophobic layer and an ionic liquid-containing hydrophilic layer. A salt or salt solution may be used to remove water from the ionic liquid-containing layer before the ionic liquid is reused. The used salt may also be dried and/or concentrated and reused. The method can operate at relatively low lysis, processing, and recycling temperatures, which minimizes the environmental impact of algae processing while providing reusable biofuels and other useful products.

  4. 21 CFR 73.275 - Dried algae meal.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 21 Food and Drugs 1 2010-04-01 2010-04-01 false Dried algae meal. 73.275 Section 73.275 Food and... ADDITIVES EXEMPT FROM CERTIFICATION Foods § 73.275 Dried algae meal. (a) Identity. The color additive dried algae meal is a dried mixture of algae cells (genus Spongiococcum, separated from its culture...

  5. Root metabolic responses to short term anaerobiosis in the temperate sea grass Zostera marina L

    SciTech Connect

    Smith, R.D.; Pregnall, A.M.; Alberte, R.S.

    1986-04-01

    The submerged angiosperm Z. marina grows in highly reducing marine sediments. The roots experience periods of oxygen deprivation at night when photosynthesis-mediated oxygen transport from the shoot ceases. Despite this apparently inhospitable environment, Z. marina is extremely productive. This study sought to determine root metabolic responses to short term anaerobiosis. Roots were incubated for 4 h in the presence of /sup 14/C-sucrose. Amino acids and Krebs cycle intermediates were then extracted and label was quantified. Ethanol and lactate were the most heavily labeled metabolites following short term anaerobiosis. Despite increased synthesis of ethanol during anaerobiosis, endogenous levels do not increase significantly. Instead over 90% of newly synthesized ethanol is released by roots into the incubation medium. The authors conclude that release of ethanol by roots occurs naturally and prevents excessive accumulation of a potentially toxic product.

  6. The effect of wind direction and building surroundings on a marina bay in the Black Sea

    NASA Astrophysics Data System (ADS)

    Katona, Cosmin; Safta, Carmen Anca

    2017-01-01

    The wind effect has usually a major importance in the marina bay. These environmental sites are an interplay between tourist and commercial activities, requiring a high-detailed and definition studies of the dynamic fluid in the harbor. Computational Fluid Dynamics (CFD) has been used elaborately in urban surroundings research. However, most CFD studies were performed for harbors for only a confined number of wind directions and/or without considering the building surroundings effects. This paper presents the results of different simulations based on various wind flows and the CFD simulation of coupled urban wind flow and general wind directions upon a semi-closed area. Thus the importance of wind effects on the evaluation of the marina bay will be pointed out to achieve a safe and secure mooring at the berth and eventually a good potential of renewable energy for an impending green harbor.

  7. The influence of flavonoid amendment on the absorption of cadmium in Avicennia marina roots.

    PubMed

    Li, Jian; Lu, Haoliang; Liu, Jingchun; Hong, Hualong; Yan, Chongling

    2015-10-01

    Flavonoid is a key factor for the tolerance to cadmium in plants. Concentration-dependent kinetics experiment was conducted to investigate the influence of flavonoid amendment on the Cd(2+) uptake in Avicennia marina (Forsk) Vierh. roots. We found that compared with the control, saturation concentration and maximal absorption rate of Cd was higher under flavonoid amendment (p<0.05). When roots were exposed to ion transport inhibitor (LaCl3), flavonoid amendment also facilitated Cd transport in roots. Flavonoids had no influence on Cd(2+) uptake in root cell walls. In conclusion, flavonoids enhance the tolerance to Cd and have a significant stimulative effect on symplasm transport of Cd in A. marina roots. Ca(2+)-channel was not the unique means of symplasm transport for Cd(2+) absorption.

  8. Biology of the Marine Heterotrophic Dinoflagellate Oxyrrhis marina: Current Status and Future Directions

    PubMed Central

    Guo, Zhiling; Zhang, Huan; Liu, Sheng; Lin, Senjie

    2013-01-01

    Heterotrophic dinoflagellates are prevalent protists in marine environments, which play an important role in the carbon cycling and energy flow in the marine planktonic community. Oxyrrhis marina (Dinophyceae), a widespread heterotrophic dinoflagellate, is a model species used for a broad range of ecological, biogeographic, and evolutionary studies. Despite the increasing research effort on this species, there lacks a synthesis of the existing data and a coherent picture of this organism. Here we reviewed the literature to provide an overview of what is known regarding the biology of O. marina, and identify areas where further studies are needed. As an early branch of the dinoflagellate lineage, O. marina shares similarity with typical dinoflagellates in permanent condensed chromosomes, less abundant nucleosome proteins compared to other eukaryotes, multiple gene copies, the occurrence of trans-splicing in nucleus-encoded mRNAs, highly fragmented mitochondrial genome, and disuse of ATG as a start codon for mitochondrial genes. On the other hand, O. marina also exhibits some distinct cytological features (e.g., different flagellar structure, absence of girdle and sulcus or pustules, use of intranuclear spindle in mitosis, presence of nuclear plaque, and absence of birefringent periodic banded chromosomal structure) and genetic features (e.g., a single histone-like DNA-associated protein, cob-cox3 gene fusion, 5′ oligo-U cap in the mitochondrial transcripts of protein-coding genes, the absence of mRNA editing, the presence of stop codon in the fused cob-cox3 mRNA produced by post-transcriptional oligoadenylation, and vestigial plastid genes). The best-studied biology of this dinoflagellate is probably the prey and predators types, which include a wide range of organisms. On the other hand, the abundance of this species in the natural waters and its controlling factors, genome organization and gene expression regulation that underlie the unusual cytological and

  9. Improved oxidation of naringenin to carthamidin and isocarthamidin by Rhodotorula marina.

    PubMed

    Madej, Anna; Popłoński, Jarosław; Huszcza, Ewa

    2014-05-01

    A novel single-step microbial transformation process for the efficient production of carthamidin and isocarthamidin from naringenin by yeast Rhodotorula marina in an aerated bioreactor was described. The biotransformation led to the total product concentration of 233 mg/l. The highest conversion efficiency observed for carthamidin was 0.31 mg/mg of naringenin and for isocarthamidin 0.47 mg/mg of naringenin.

  10. Economic Impacts from Spending by Marina Slip Renters and Private Dock Owners at Lake Sidney Lanier

    DTIC Science & Technology

    2008-02-01

    and private docks at Lake Sid- ney Lanier ( Georgia ), Lake Barkley (Kentucky/Tennessee), and Hartwell Lake ( Georgia /North Carolina/South Carolina...north- ern Georgia . This economic assessment is based on the results of a 1999 survey of the samples of Lake Sidney Lanier marina slip renters and pri...renters, and private dock owners and guests at Lake Sidney Lanier, located in northern Georgia and situated within the U.S. Army Corps of Engineers

  11. Morphology, morphogenesis and molecular phylogeny of a new marine ciliate, Trichototaxis marina n. sp. (Ciliophora, Urostylida).

    PubMed

    Lu, Xiaoteng; Gao, Feng; Shao, Chen; Hu, Xiaozhong; Warren, Alan

    2014-10-01

    The live morphology, infraciliature and morphogenesis of a new urostylid ciliate, Trichototaxis marina n. sp., collected from coastal water in Qingdao, China, were studied based on the observations of live and silver stained specimens. The new species is characterised as follows: body very flexible and contractile, slight to brick-reddish in colour due to irregularly-shaped, brick-red pigments; ca. 70 adoral membranelles; about 17 frontal cirri arranged in a bicorona; average 67 midventral pairs, the right base of each pair being conspicuously larger than the left base; five to seven transverse cirri; constantly two frontoterminal, one buccal and two pretransverse ventral cirri; two or three left marginal rows; right and innermost left marginal rows with 56-92 and 66-106 cirri, respectively; six bipolar dorsal kineties; more than 100 macronuclear nodules. The characteristic morphogenetic feature in T. marina is the development of the left marginal rows, that is, only one left marginal row is newly built the other one or two being retained from the parental cell. Phylogenetic analyses based on small subunit ribosomal gene sequence data reveal a close relationship of T. marina with members of family Pseudokeronopsidae. Copyright © 2014 Elsevier GmbH. All rights reserved.

  12. A Zostera marina manganese superoxide dismutase gene involved in the responses to temperature stress.

    PubMed

    Liu, Jiao; Tang, Xuexi; Wang, You; Zang, Yu; Zhou, Bin

    2016-01-10

    Superoxide dismutase (SOD) is an essential enzyme playing a pivotal role in the protection mechanism against oxidative stress by reducing superoxide radicals. In the present study, the full-length cDNA sequence of manganese superoxide dismutase was identified from Zostera marina (ZmMnSOD) via raid amplification of cDNA ends (RACE) technique and expressed sequence tags (ESTs) analysis. The open reading frame (ORF) encoded a polypeptide of 254 amino acid residues, which shared 69%-77% similarity with previous identified SODs. Analysis of the deduced amino acid revealed conserved features, including functional domains, signature motifs and metal binding sites. Phylogenetic analysis revealed that ZmMnSOD was closer to the SODs from angiosperm than those from other organisms. The mRNA expression level of ZmMnSOD at different temperatures was investigated using real-time PCR and it was significantly up-regulated from 5°C to 15°C, and then dramatically down-regulated. The recombinant ZmMnSOD protein was purified and exhibited Mn(2+) ions dependency specific enzymatic activity and strong antioxidant activity over a wide temperature range. All these results indicate that ZmMnSOD is an authentic member of the plant SOD family and may play important roles in minimizing the effect of oxidative damage in Z. marina against temperature stress and affect the adaptability of Z. marina to global warming. Copyright © 2015 Elsevier B.V. All rights reserved.

  13. Conceptual bases for prey biorecognition and feeding selectivity in the microplanktonic marine phagotroph Oxyrrhis marina.

    PubMed

    Martel, Claire M

    2009-05-01

    It is suspected that phagotrophic marine protozoa might possess feeding receptors that enable them to discern the nutritional quality of individual prey items (during prey-handling) on the basis of their cell-surface biochemistry. This article reviews advances in our understanding of the molecular mechanisms that mediate the biorecognition and selection of nonself (microalgal) prey items by the microplanktonic marine phagotroph Oxyrrhis marina. The potential importance of lectin-glycan interactions is first considered in view of findings which demonstrate that O. marina possesses lectin-like feeding receptors specific for prey-surface (mannose) glycoconjugates. Secondly, some conceptual bases for indirect or 'opsonic' modes of prey biorecognition mediated by soluble prey-labelling proteins are presented. Finally, the possibility that some accounts of selective feeding in O. marina might result from the noxious effects of prey-associated chemicals rather than active 'distaste' by phagotrophic cells is discussed. Recent evidence for toxic superoxide (O(2)(-)) production by marine microalgae is afforded particular attention given that release of O(2)(-) anions can be exacerbated by the binding of mannose-specific lectins to the microalgal cell wall; a novel model for grazing-activated chemical defence is proposed.

  14. [Hydroxyectoine synthesis and release under osmotic shock in Cobetia marina CICC10367].

    PubMed

    Lang, Yajun; Ren, Yanan; Bai, Lin; Zhang, Linghua

    2009-12-01

    To obtain hydroxyectoine-producing strain with tolerance to osmotic shock and improve hydroxyectoine productivity by adopting "bacteria milking" process. We isolated a strain from salt lake, and then carried out the identifications of morphology, physiological and biochemical characteristics of the strain. We also investigated the effects of the medium and its NaCl concentration on the hydroxyectoine synthesis of this strain. Under optimal condition, hydroxyectoine was produced by adopting "bacteria milking" process. A hydroxyectoine-producing strain was obtained and identified as Cobetia marina CICC10367 (C. marina CICC10367). It could enhance hydroxyeceoine synthesis when the medium adopting monosodium glutamate as the sole source of carbon and nitrogen at 90 g/L NaCl. The highest synthesized hydroxyectoine concentration was 694.5 mg/L in the above described medium. After the "bacteria milking" process of six osmotic shock, the total concentration of hydroxyectoine was 4179.0 mg/L, the productivity was 597.0 mg/L/d, and the conversion rate of hydroxyectoine on substrate was 80.2 mg/g. C. marina CICC10367 was able to synthesize hydroxyectoine under NaCl induction and tolerant to osmotic stress. The hydroxyectoine productivity and conversion rate of hydroxyectoine on substrate were both significantly improved by adopting "bacteria milking" process.

  15. Rhizosphere microbiome metagenomics of gray mangroves (Avicennia marina) in the Red Sea.

    PubMed

    Alzubaidy, Hanin; Essack, Magbubah; Malas, Tareq B; Bokhari, Ameerah; Motwalli, Olaa; Kamanu, Frederick Kinyua; Jamhor, Suhaiza Ahmad; Mokhtar, Noor Azlin; Antunes, André; Simões, Marta Filipa; Alam, Intikhab; Bougouffa, Salim; Lafi, Feras F; Bajic, Vladimir B; Archer, John A C

    2016-02-01

    Mangroves are unique, and endangered, coastal ecosystems that play a vital role in the tropical and subtropical environments. A comprehensive description of the microbial communities in these ecosystems is currently lacking, and additional studies are required to have a complete understanding of the functioning and resilience of mangroves worldwide. In this work, we carried out a metagenomic study by comparing the microbial community of mangrove sediment with the rhizosphere microbiome of Avicennia marina, in northern Red Sea mangroves, along the coast of Saudi Arabia. Our results revealed that rhizosphere samples presented similar profiles at the taxonomic and functional levels and differentiated from the microbiome of bulk soil controls. Overall, samples showed predominance by Proteobacteria, Bacteroidetes and Firmicutes, with high abundance of sulfate reducers and methanogens, although specific groups were selectively enriched in the rhizosphere. Functional analysis showed significant enrichment in 'metabolism of aromatic compounds', 'mobile genetic elements', 'potassium metabolism' and 'pathways that utilize osmolytes' in the rhizosphere microbiomes. To our knowledge, this is the first metagenomic study on the microbiome of mangroves in the Red Sea, and the first application of unbiased 454-pyrosequencing to study the rhizosphere microbiome associated with A. marina. Our results provide the first insights into the range of functions and microbial diversity in the rhizosphere and soil sediments of gray mangrove (A. marina) in the Red Sea.

  16. Genetic structure of eelgrass Zostera marina meadows in an embayment with restricted water flow

    USGS Publications Warehouse

    Munoz-Salazar, R.; Talbot, S.L.; Sage, G.K.; Ward, D.H.; Cabello-Pasini, Alejandro

    2006-01-01

    Genetic structure of the seagrass Zostera marina in a coastal lagoon with restricted water flow, and with heterogeneous water residence times and oceanographic characteristics, was assessed using 8 polymorphic microsatellite loci. Analyses of genetic differentiation (??) and Bayesian clustering suggested that the Z. marina population in San Quintin Bay (SQB) is genetically substructured, with at least 4 genetically different groups: (1) West Head, (2) Mouth, (3) East Arm, and (4) East Head. The greatest ?? value was observed between the most distant sites (?? = 0.095). The lowest values were found among sites closest to the mouth of the coastal lagoon (?? = 0.000 to 0.009). The maximum likelihood approach showed that the sites at the mouth have a mixed pattern of gene flow without a unidirectional pattern. In contrast, there was a clear pattern of asymmetrical gene flow from the mouth towards the West Head. These results suggested that the restriction of water flow at the heads, current pattern, and the distance between sites can reduce genetic flow and promote genetic differences within Z. marina meadows in small water embayments such as SQB. Though the population is genetically substructured and a 14 % decline in cover has been detected, this study did not show evidence of a recent genetic bottleneck. In contrast, mouth sites have experienced a recent expansion in their population size, and also perhaps a recent influx of rare alleles from genetically distinct immigrants. ?? Inter-Research 2006.

  17. Collection, Isolation and Culture of Marine Algae.

    ERIC Educational Resources Information Center

    James, Daniel E.

    1984-01-01

    Methods of collecting, isolating, and culturing microscopic and macroscopic marine algae are described. Three different culture media list of chemicals needed and procedures for preparing Erdschreiber's and Provasoli's E. S. media. (BC)

  18. 2011 Biomass Program Platform Peer Review: Algae

    SciTech Connect

    Yang, Joyce

    2012-02-01

    This document summarizes the recommendations and evaluations provided by an independent external panel of experts at the 2011 U.S. Department of Energy Biomass Program’s Algae Platform Review meeting.

  19. Collection, Isolation and Culture of Marine Algae.

    ERIC Educational Resources Information Center

    James, Daniel E.

    1984-01-01

    Methods of collecting, isolating, and culturing microscopic and macroscopic marine algae are described. Three different culture media list of chemicals needed and procedures for preparing Erdschreiber's and Provasoli's E. S. media. (BC)

  20. Pyogenic Flexor Tenosynovitis Caused by Shewanella algae.

    PubMed

    Fluke, Erin C; Carayannopoulos, Nikoletta L; Lindsey, Ronald W

    2016-07-01

    Pyogenic flexor tenosynovitis is an orthopedic emergency most commonly caused by Staphylococcus aureus and streptococci and occasionally, when associated with water exposure, Mycobacterium marinum. Shewanella algae, a gram-negative bacillus found in warm saltwater environments, has infrequently been reported to cause serious soft tissue infections and necrosis. In this case, S. algae caused complicated flexor tenosynovitis requiring open surgical irrigation and debridement. Flexor tenosynovitis caused by S. algae rapidly presented with all 4 Kanavel cardinal signs as well as subcutaneous purulence, ischemia, and necrosis, thus meeting the requirements for Pang et al group III classification of worst prognosis. Because of its rarity and virulence, S. algae should always be considered in cases of flexor tenosynovitis associated with traumatic water exposure to treat and minimize morbidity appropriately.

  1. The Alga Ochromonas danica Produces Bromosulfolipids.

    PubMed

    White, Alexander R; Duggan, Brendan M; Tsai, Shiou-Chuan; Vanderwal, Christopher D

    2016-03-04

    Many halogenases interchangeably incorporate chlorine and bromine into organic molecules. On the basis of an unsubstantiated report that the alga Ochromonas danica, a prodigious producer of chlorosulfolipids, was able to produce bromosulfolipids, we have investigated the promiscuity of its halogenases toward bromine incorporation. We have found that bromosulfolipids are produced with the exact positional and stereochemical selectivity as in the chlorosulfolipid danicalipin A when this alga is grown under modified conditions containing excess bromide ion.

  2. Stochastic Forecasting of Algae Blooms in Lakes

    SciTech Connect

    Wang, Peng; Tartakovsky, Daniel M.; Tartakovsky, Alexandre M.

    2013-01-03

    We consider a general framework to predict the development of harmful algal blooms (HABs) in a lake driven by uncertain parameters. To quantify the concentration uncertainty of those algae groups via their joint probabilistic density function (PDF), we explore an approach based on the Fokker-Planck equation. Our result is presented in an example where abundant nutrients contribute to the proliferation of cyanobacteria and other minor algae groups.

  3. Effect of Interactions Among Algae on Nitrogen Fixation by Blue-Green Algae (Cyanobacteria) in Flooded Soils

    PubMed Central

    Wilson, John T.; Greene, Sarah; Alexander, Martin

    1979-01-01

    Nitrogen fixation (C2H2 reduction) by algae in flooded soil was limited by interactions within the algal community. Nitrogen fixation by either indigenous algae or Tolypothrix tenuis was reduced severalfold by a dense suspension of the green alga Nephrocytium sp. Similarly, interactions between the nitrogen-fixing alga (cyanobacterium) Aulosira 68 and natural densities of indigenous algae limited nitrogen-fixing activity in one of two soils examined. This was demonstrated by developing a variant of Aulosira 68 that was resistant to the herbicide simetryne at concentrations that prevented development of indigenous algae. More nitrogen was fixed by the resistant variant in flooded soil containing herbicide than was fixed in herbicide-free soil by either the indigenous algae or indigenous algae plus the parent strain of Aulosira. Interference from indigenous algae may hamper the development of nitrogen-fixing algae introduced into rice fields in attempts to increase biological nitrogen fixation. PMID:16345463

  4. Antioxidant Activity of Hawaiian Marine Algae

    PubMed Central

    Kelman, Dovi; Posner, Ellen Kromkowski; McDermid, Karla J.; Tabandera, Nicole K.; Wright, Patrick R.; Wright, Anthony D.

    2012-01-01

    Marine algae are known to contain a wide variety of bioactive compounds, many of which have commercial applications in pharmaceutical, medical, cosmetic, nutraceutical, food and agricultural industries. Natural antioxidants, found in many algae, are important bioactive compounds that play an important role against various diseases and ageing processes through protection of cells from oxidative damage. In this respect, relatively little is known about the bioactivity of Hawaiian algae that could be a potential natural source of such antioxidants. The total antioxidant activity of organic extracts of 37 algal samples, comprising of 30 species of Hawaiian algae from 27 different genera was determined. The activity was determined by employing the FRAP (Ferric Reducing Antioxidant Power) assays. Of the algae tested, the extract of Turbinaria ornata was found to be the most active. Bioassay-guided fractionation of this extract led to the isolation of a variety of different carotenoids as the active principles. The major bioactive antioxidant compound was identified as the carotenoid fucoxanthin. These results show, for the first time, that numerous Hawaiian algae exhibit significant antioxidant activity, a property that could lead to their application in one of many useful healthcare or related products as well as in chemoprevention of a variety of diseases including cancer. PMID:22412808

  5. Carotenoids in Algae: Distributions, Biosyntheses and Functions

    PubMed Central

    Takaichi, Shinichi

    2011-01-01

    For photosynthesis, phototrophic organisms necessarily synthesize not only chlorophylls but also carotenoids. Many kinds of carotenoids are found in algae and, recently, taxonomic studies of algae have been developed. In this review, the relationship between the distribution of carotenoids and the phylogeny of oxygenic phototrophs in sea and fresh water, including cyanobacteria, red algae, brown algae and green algae, is summarized. These phototrophs contain division- or class-specific carotenoids, such as fucoxanthin, peridinin and siphonaxanthin. The distribution of α-carotene and its derivatives, such as lutein, loroxanthin and siphonaxanthin, are limited to divisions of Rhodophyta (macrophytic type), Cryptophyta, Euglenophyta, Chlorarachniophyta and Chlorophyta. In addition, carotenogenesis pathways are discussed based on the chemical structures of carotenoids and known characteristics of carotenogenesis enzymes in other organisms; genes and enzymes for carotenogenesis in algae are not yet known. Most carotenoids bind to membrane-bound pigment-protein complexes, such as reaction center, light-harvesting and cytochrome b6f complexes. Water-soluble peridinin-chlorophyll a-protein (PCP) and orange carotenoid protein (OCP) are also established. Some functions of carotenoids in photosynthesis are also briefly summarized. PMID:21747749

  6. Biogas production experimental research using algae.

    PubMed

    Baltrėnas, Pranas; Misevičius, Antonas

    2015-01-01

    The current study is on the the use of macro-algae as feedstock for biogas production. Three types of macro-algae, Cladophora glomerata (CG), Chara fragilis (CF), and Spirogyra neglecta (SN), were chosen for this research. The experimental studies on biogas production were carried out with these algae in a batch bioreactor. In the bioreactor was maintained 35 ± 1°C temperature. The results showed that the most appropriate macro-algae for biogas production are Spirogyra neglecta (SN) and Cladophora glomerata (CG). The average amount of biogas obtained from the processing of SN - 0.23 m(3)/m(3)d, CG - 0.20 m(3)/m(3)d, and CF - 0.12 m(3)/m(3)d. Considering the concentration of methane obtained during the processing of SN and CG, which after eight days and until the end of the experiment exceeded 60%, it can be claimed that biogas produced using these algae is valuable. When processing CF, the concentration of methane reached the level of 50% only by the final day of the experiment, which indicates that this alga is less suitable for biogas production.

  7. Antioxidant activity of Hawaiian marine algae.

    PubMed

    Kelman, Dovi; Posner, Ellen Kromkowski; McDermid, Karla J; Tabandera, Nicole K; Wright, Patrick R; Wright, Anthony D

    2012-02-01

    Marine algae are known to contain a wide variety of bioactive compounds, many of which have commercial applications in pharmaceutical, medical, cosmetic, nutraceutical, food and agricultural industries. Natural antioxidants, found in many algae, are important bioactive compounds that play an important role against various diseases and ageing processes through protection of cells from oxidative damage. In this respect, relatively little is known about the bioactivity of Hawaiian algae that could be a potential natural source of such antioxidants. The total antioxidant activity of organic extracts of 37 algal samples, comprising of 30 species of Hawaiian algae from 27 different genera was determined. The activity was determined by employing the FRAP (Ferric Reducing Antioxidant Power) assays. Of the algae tested, the extract of Turbinaria ornata was found to be the most active. Bioassay-guided fractionation of this extract led to the isolation of a variety of different carotenoids as the active principles. The major bioactive antioxidant compound was identified as the carotenoid fucoxanthin. These results show, for the first time, that numerous Hawaiian algae exhibit significant antioxidant activity, a property that could lead to their application in one of many useful healthcare or related products as well as in chemoprevention of a variety of diseases including cancer.

  8. De novo assembly and characterization of the transcriptome of seagrass Zostera marina using Illumina paired-end sequencing.

    PubMed

    Kong, Fanna; Li, Hong; Sun, Peipei; Zhou, Yang; Mao, Yunxiang

    2014-01-01

    The seagrass Zostera marina is a monocotyledonous angiosperm belonging to a polyphyletic group of plants that can live submerged in marine habitats. Zostera marina L. is one of the most common seagrasses and is considered a cornerstone of marine plant molecular ecology research and comparative studies. However, the mechanisms underlying its adaptation to the marine environment still remain poorly understood due to limited transcriptomic and genomic data. Here we explored the transcriptome of Z. marina leaves under different environmental conditions using Illumina paired-end sequencing. Approximately 55 million sequencing reads were obtained, representing 58,457 transcripts that correspond to 24,216 unigenes. A total of 14,389 (59.41%) unigenes were annotated by blast searches against the NCBI non-redundant protein database. 45.18% and 46.91% of the unigenes had significant similarity with proteins in the Swiss-Prot database and Pfam database, respectively. Among these, 13,897 unigenes were assigned to 57 Gene Ontology (GO) terms and 4,745 unigenes were identified and mapped to 233 pathways via functional annotation against the Kyoto Encyclopedia of Genes and Genomes pathway database (KEGG). We compared the orthologous gene family of the Z. marina transcriptome to Oryza sativa and Pyropia yezoensis and 11,667 orthologous gene families are specific to Z. marina. Furthermore, we identified the photoreceptors sensing red/far-red light and blue light. Also, we identified a large number of genes that are involved in ion transporters and channels including Na+ efflux, K+ uptake, Cl- channels, and H+ pumping. Our study contains an extensive sequencing and gene-annotation analysis of Z. marina. This information represents a genetic resource for the discovery of genes related to light sensing and salt tolerance in this species. Our transcriptome can be further utilized in future studies on molecular adaptation to abiotic stress in Z. marina.

  9. De Novo Assembly and Characterization of the Transcriptome of Seagrass Zostera marina Using Illumina Paired-End Sequencing

    PubMed Central

    Kong, Fanna; Li, Hong; Sun, Peipei; Zhou, Yang; Mao, Yunxiang

    2014-01-01

    Background The seagrass Zostera marina is a monocotyledonous angiosperm belonging to a polyphyletic group of plants that can live submerged in marine habitats. Zostera marina L. is one of the most common seagrasses and is considered a cornerstone of marine plant molecular ecology research and comparative studies. However, the mechanisms underlying its adaptation to the marine environment still remain poorly understood due to limited transcriptomic and genomic data. Principal Findings Here we explored the transcriptome of Z. marina leaves under different environmental conditions using Illumina paired-end sequencing. Approximately 55 million sequencing reads were obtained, representing 58,457 transcripts that correspond to 24,216 unigenes. A total of 14,389 (59.41%) unigenes were annotated by blast searches against the NCBI non-redundant protein database. 45.18% and 46.91% of the unigenes had significant similarity with proteins in the Swiss-Prot database and Pfam database, respectively. Among these, 13,897 unigenes were assigned to 57 Gene Ontology (GO) terms and 4,745 unigenes were identified and mapped to 233 pathways via functional annotation against the Kyoto Encyclopedia of Genes and Genomes pathway database (KEGG). We compared the orthologous gene family of the Z. marina transcriptome to Oryza sativa and Pyropia yezoensis and 11,667 orthologous gene families are specific to Z. marina. Furthermore, we identified the photoreceptors sensing red/far-red light and blue light. Also, we identified a large number of genes that are involved in ion transporters and channels including Na+ efflux, K+ uptake, Cl− channels, and H+ pumping. Conclusions Our study contains an extensive sequencing and gene-annotation analysis of Z. marina. This information represents a genetic resource for the discovery of genes related to light sensing and salt tolerance in this species. Our transcriptome can be further utilized in future studies on molecular adaptation to abiotic stress in

  10. Energetics of Photosystem II charge recombination in Acaryochloris marina studied by thermoluminescence and flash-induced chlorophyll fluorescence measurements.

    PubMed

    Cser, Krisztián; Deák, Zsuzsanna; Telfer, Alison; Barber, James; Vass, Imre

    2008-01-01

    We studied the charge recombination characteristics of Photosystem II (PSII) redox components in whole cells of the chlorophyll (Chl) d-dominated cyanobacterium, Acaryochloris marina, by flash-induced chlorophyll fluorescence and thermoluminescence measurements. Flash-induced chlorophyll fluorescence decay was retarded in the mus and ms time ranges and accelerated in the s time range in Acaryochloris marina relative to that in the Chl a-containing cyanobacterium, Synechocystis PCC 6803. In the presence of 3-(3,4-dichlorophenyl)-1, 1-dimethylurea, which blocks the Q(B) site, the relaxation of fluorescence decay arising from S(2)Q(A)(-) recombination was somewhat faster in Acaryochloris marina than in Synechocystis PCC 6803. Thermoluminescence intensity of the so called B band, arising from the recombination of the S(2)Q(B)(-) charge separated state, was enhanced significantly (2.5 fold) on the basis of equal amounts of PSII in Acaryochloris marina as compared with Synechocystis 6803. Our data show that the energetics of charge recombination is modified in Acaryochloris marina leading to a approximately 15 meV decrease of the free energy gap between the Q(A) and Q(B) acceptors. In addition, the total free energy gap between the ground state and the excited state of the reaction center chlorophyll is at least approximately 25-30 meV smaller in Acaryochloris marina, suggesting that the primary donor species cannot consist entirely of Chl a in Acaryochloris marina, and there is a contribution from Chl d as well.

  11. Hyperspectral imaging of snow algae and green algae from aeroterrestrial habitats.

    PubMed

    Holzinger, Andreas; Allen, Michael C; Deheyn, Dimitri D

    2016-09-01

    Snow algae and green algae living in aeroterrestrial habitats are ideal objects to study adaptation to high light irradiation. Here, we used a detailed description of the spectral properties as a proxy for photo-acclimation/protection in snow algae (Chlamydomonas nivalis, Chlainomonas sp. and Chloromonas sp.) and charophyte green algae (Zygnema sp., Zygogonium ericetorum and Klebsormidium crenulatum). The hyperspectral microscopic mapping and imaging technique allowed us to acquire total absorption spectra of these microalgae in the waveband of 400-900nm. Particularly in Chlamydomonas nivalis and Chlainomonas sp., a high absorbance between 400-550nm was observed, due to naturally occurring secondary carotenoids; in Chloromonas sp. and in the charopyhte algae this high absorbance was missing, the latter being close relatives to land plants. To investigate if cellular water loss has an influence on the spectral properties, the cells were plasmolysed in sorbitol or desiccated at ambient air. While in snow algae, these treatments did hardly change the spectral properties, in the charopyhte algae the condensation of the cytoplasm and plastids increased the absorbance in the lower waveband of 400-500nm. These changes might be ecologically relevant and photoprotective, as aeroterrestrial algae are naturally exposed to occasional water limitation, leading to desiccation, which are conditions usually occurring together with higher irradiation.

  12. Hyperspectral imaging of snow algae and green algae from aeroterrestrial habitats

    PubMed Central

    Holzinger, Andreas; Allen, Michael C.; Deheyn, Dimitri D.

    2016-01-01

    Snow algae and green algae living in aeroterrestrial habitats are ideal obbjects to study adaptation to high light irradiation. Here, we used a detailed description of the spectral properties as a proxy for photo-acclimation/protection in snow algae (Chlamydomonas nivalis, Chlainomonas sp. and Chloromonas sp.) and charopyhte green algae (Zygnema sp., Zygogonium ericetorum and Klebsormidium crenulatum). The hyperspectral microscopic mapping and imaging technique allowed us to acquire total absorbance spectra of these microalgae in the waveband of 400-900 nm. Particularly in Chlamydomonas nivalis and Chlainomonas sp., a high absorbance in the wave band of 400-550 nm was observed, due to naturally occurring secondary carotenoids; in Chloromonas sp. and in the charopyhte algae this was missing, the latter being close relatives to land plants. To investigate if cellular water loss has an influence on the spectral properties, the cells were plasmolysed in sorbitol or desiccated at ambient air. While in snow algae, these treatments did not change the spectral properties, in the charopyhte algae the condensation of the cytoplasm and plastids increased the absorbance in the lower waveband of 400 – 500 nm. These changes might be ecologically relevant and photoprotective, as aeroterrestrial algae are naturally exposed to occasional water limitation, leading to desiccation, which are conditions usually occurring together with higher irradiation. PMID:27442511

  13. PPR proteins of green algae

    PubMed Central

    Tourasse, Nicolas J; Choquet, Yves; Vallon, Olivier

    2013-01-01

    Using the repeat finding algorithm FT-Rep, we have identified 154 pentatricopeptide repeat (PPR) proteins in nine fully sequenced genomes from green algae (with a total of 1201 repeats) and grouped them in 47 orthologous groups. All data are available in a database, PPRdb, accessible online at http://giavap-genomes.ibpc.fr/ppr. Based on phylogenetic trees generated from the repeats, we propose evolutionary scenarios for PPR proteins. Two PPRs are clearly conserved in the entire green lineage: MRL1 is a stabilization factor for the rbcL mRNA, while HCF152 binds in plants to the psbH-petB intergenic region. MCA1 (the stabilization factor for petA) and PPR7 (a short PPR also acting on chloroplast mRNAs) are conserved across the entire Chlorophyta. The other PPRs are clade-specific, with evidence for gene losses, duplications, and horizontal transfer. In some PPR proteins, an additional domain found at the C terminus provides clues as to possible functions. PPR19 and PPR26 possess a methyltransferase_4 domain suggesting involvement in RNA guanosine methylation. PPR18 contains a C-terminal CBS domain, similar to the CBSPPR1 protein found in nucleoids. PPR16, PPR29, PPR37, and PPR38 harbor a SmR (MutS-related) domain similar to that found in land plants pTAC2, GUN1, and SVR7. The PPR-cyclins PPR3, PPR4, and PPR6, in addition, contain a cyclin domain C-terminal to their SmR domain. PPR31 is an unusual PPR-cyclin containing at its N terminus an OctotricoPeptide Repeat (OPR) and a RAP domain. We consider the possibility that PPR proteins with a SmR domain can introduce single-stranded nicks in the plastid chromosome. PMID:24021981

  14. [Algae removal of high algae raw water by coagulation enhanced by ozonation].

    PubMed

    Liu, Hai-Long; Yang, Dong; Zhao, Zhi-Yong; Li, Zheng-Jian; Cheng, Fang-Qin

    2009-07-15

    Apparent molecular weight distribution (AMWD) and resin fractionation were used to characterize organic matters of the raw water. Removal of algae, change and removal of dissolved organic carbon (DOC), disinfection by products (DBPs) control during the preozonation enhanced coagulation treatments in the jar-scale and pilot-scale experiment were studied. Algae activity (AA) was measured and used to elucidate the mechanisms of algae removal by above treatments. Results show that algae removal can be improved distinctively by proper preozonation, as the ozone dose 1.0 mg x L(-1), for instance. Algae removal could be increased from 55%-85% by traditional coagulation to 95% by enhanced coagulation after preozonation; and the best removal achieved 99.3% with ozone 1.0 mg x L(-1) and PACl 3.0 mg x L(-1); the residual THMFP (Trihalomethanes formation potential) was lowered from 117 microg x L(-1) by traditional coagulation to 46 microg x L(-1). But higher dose of ozone (as > or = 2.0 mg x L(-1)) impairs organic matter removal, although it decreases algae activity further. Significant differences were found in algae removal by AA detection between ozonation and traditional coagulation. Traditional coagulation had little effect on AA no matter the different PAC1 doses; while AA decreased clearly after ozonation. AA was lowered below 12 under 0.5-2.0 mg x L(-1) ozonation; and it kept decreasing with increase of ozone dosage. During the following coagulation, coagulant or some of its hydrolysised components enhanced the AA decrease by ozonation. Compared to the method of normal microscopy counting, AA test expresses the influence of algae living state by water treatment processes more clearly; which would provide treatment process designer with more distinct information about algae removal mechanisms and how to arrange the treatment processes to improve algae removal.

  15. Estimation of alga growth stage and lipid content growth rate

    NASA Technical Reports Server (NTRS)

    Embaye, Tsegereda N. (Inventor); Trent, Jonathan D. (Inventor)

    2012-01-01

    Method and system for estimating a growth stage of an alga in an ambient fluid. Measured light beam absorption or reflection values through or from the alga and through an ambient fluid, in each of two or more wavelength sub-ranges, are compared with reference light beam absorption values for corresponding wavelength sub-ranges for in each alga growth stage to determine (1) which alga growth stage, if any, is more likely and (2) whether estimated lipid content of the alga is increasing or has peaked. Alga growth is preferably terminated when lipid content has approximately reached a maximum value.

  16. Phospholipids of New Zealand Edible Brown Algae.

    PubMed

    Vyssotski, Mikhail; Lagutin, Kirill; MacKenzie, Andrew; Mitchell, Kevin; Scott, Dawn

    2017-07-01

    Edible brown algae have attracted interest as a source of beneficial allenic carotenoid fucoxanthin, and glyco- and phospholipids enriched in polyunsaturated fatty acids. Unlike green algae, brown algae contain no or little phosphatidylserine, possessing an unusual aminophospholipid, phosphatidyl-O-[N-(2-hydroxyethyl) glycine], PHEG, instead. When our routinely used technique of (31)P-NMR analysis of phospholipids was applied to the samples of edible New Zealand brown algae, a number of signals corresponding to unidentified phosphorus-containing compounds were observed in total lipids. NI (negative ion) ESI QToF MS spectra confirmed the presence of more familiar phospholipids, and also suggested the presence of PHEG or its isomers. The structure of PHEG was confirmed by comparison with a synthetic standard. An unusual MS fragmentation pattern that was also observed prompted us to synthesise a number of possible candidates, and was found to follow that of phosphatidylhydroxyethyl methylcarbamate, likely an extraction artefact. An unexpected outcome was the finding of ceramidephosphoinositol that has not been reported previously as occurring in brown algae. An uncommon arsenic-containing phospholipid has also been observed and quantified, and its TLC behaviour studied, along with that of the newly synthesised lipids.

  17. Effect of ferrate on green algae removal.

    PubMed

    Kubiňáková, Emília; Híveš, Ján; Gál, Miroslav; Fašková, Andrea

    2017-08-05

    Green algae Cladophora aegagropila, present in cooling water of thermal power plants, causes many problems and complications, especially during summer. However, algae and its metabolites are rarely eliminated by common removal methods. In this work, the elimination efficiency of electrochemically prepared potassium ferrate(VI) on algae from cooling water was investigated. The influence of experimental parameters, such as Fe(VI) dosage, application time, pH of the system, temperature and hydrodynamics of the solution on removal efficiency, was optimized. This study demonstrates that algae C. aegagropila can be effectively removed from cooling water by ferrate. Application of ferrate(VI) at the optimized dosage and under the suitable conditions (temperature, pH) leads to 100% removal of green algae Cladophora from the system. Environmentally friendly reduction products (Fe(III)) and coagulation properties favour the application of ferrate for the treatment of water contaminated with studied microorganisms compared to other methods such as chlorination and use of permanganate, where harmful products are produced.

  18. Oil from algae; salvation from peak oil?

    PubMed

    Rhodes, Christopher J

    2009-01-01

    A review is presented of the use of algae principally to produce biodiesel fuel, as a replacement for conventional fuel derived from petroleum. The imperative for such a strategy is that cheap supplies of crude oil will begin to wane within a decade and land-based crops cannot provide more than a small amount of the fuel the world currently uses, even if food production were allowed to be severely compromised. For comparison, if one tonne of biodiesel might be produced say, from rape-seed per hectare, that same area of land might ideally yield 100 tonnes of biodiesel grown from algae. Placed into perspective, the entire world annual petroleum demand which is now provided for by 31 billion barrels of crude oil might instead be met from algae grown on an area equivalent to 4% of that of the United States. As an additional benefit, in contrast to growing crops it is not necessary to use arable land, since pond-systems might be placed anywhere, even in deserts, and since algae grow well on saline water or wastewaters, no additional burden is imposed on freshwater-a significant advantage, as water shortages threaten. Algae offer the further promise that they might provide future food supplies, beyond what can be offered by land-based agriculture to a rising global population.

  19. Controlled regular locomotion of algae cell microrobots.

    PubMed

    Xie, Shuangxi; Jiao, Niandong; Tung, Steve; Liu, Lianqing

    2016-06-01

    Algae cells can be considered as microrobots from the perspective of engineering. These organisms not only have a strong reproductive ability but can also sense the environment, harvest energy from the surroundings, and swim very efficiently, accommodating all these functions in a body of size on the order of dozens of micrometers. An interesting topic with respect to random swimming motions of algae cells in a liquid is how to precisely control them as microrobots such that they swim according to manually set routes. This study developed an ingenious method to steer swimming cells based on the phototaxis. The method used a varying light signal to direct the motion of the cells. The swimming trajectory, speed, and force of algae cells were analyzed in detail. Then the algae cell could be controlled to swim back and forth, and traverse a crossroad as a microrobot obeying specific traffic rules. Furthermore, their motions along arbitrarily set trajectories such as zigzag, and triangle were realized successfully under optical control. Robotize algae cells can be used to precisely transport and deliver cargo such as drug particles in microfluidic chip for biomedical treatment and pharmacodynamic analysis. The study findings are expected to bring significant breakthrough in biological drives and new biomedical applications.

  20. Biological toxicity of lanthanide elements on algae.

    PubMed

    Tai, Peidong; Zhao, Qing; Su, Dan; Li, Peijun; Stagnitti, Frank

    2010-08-01

    The biological toxicity of lanthanides on marine monocellular algae was investigated. The specific objective of this research was to establish the relationship between the abundance in the seawater of lanthanides and their biological toxicities on marine monocellular algae. The results showed that all single lanthanides had similar toxic effects on Skeletonema costatum. High concentrations of lanthanides (29.04+/-0.61 micromol L(-1)) resulted in 50% reduction in growth of algae compared to the controls (0 micromol L(-1)) after 96 h (96 h-EC50). The biological toxicity of 13 lanthanides on marine monocellular algae was unrelated with the abundance of different lanthanide elements in nature, and the "Harkins rule" was not appropriate for the lanthanides. A mixed solution that contained equivalent concentrations of each lanthanide element had the same inhibition effect on algae cells as each individual lanthanide element at the same total concentration. This phenomenon is unique compared to the groups of other elements in the periodic table. Hence, we speculate that the monocellular organisms might not be able to sufficiently differentiate between the almost chemically identical lanthanide elements. Copyright (c) 2010 Elsevier Ltd. All rights reserved.

  1. Studies on marine algae for haemagglutinic activity.

    PubMed

    Alam, M T; Usmanghani, K

    1994-07-01

    Lectins (agglutinins) are important in medical and immunological applications. Phytohaemagglutinins have been found useful in blood banking. Keeping in view of these facts, the marine algae found at Karachi coastal region have been screened for agglutinic activity by using human erythrocytes of A, B, AB and 0 group. Altogether 53 algal samples were collected and subjected to extraction, fractionation serial dilution and titre determinations. The total marine algae screened for haemagglutinic activity were 44 out of these 14, 13 and 17 belonged to Chlorophyta, Phaeophyta, and Rhodophyta respectively. Among these three groups the Rhodophyta showed the highest number of lytic activity. The green marine alga Valoniopsis pachynema showed a titre value between 2(2) and 2(3), which is statistically significant. In case of brown marine algae Colpomenia sinuosa was found to be active (titre 2(3)), while Dictyota dichotoma, D. indica and Iyengaria stellata, furnished week titre value as 2(2). The red marine algae screened were 17, out of these 4 spp. showed significant activity (titre 2(3)), and these are Gelidium usmanghani, Gracilaria foliifera Hypnea pannosa and Hynea valentiae. While Scinaia fascicularis, Scinaia indica and Champia parvula were found to be weak in their onset on human erythrocytes. The results obtained were quite in agreement with those reported in the literature.

  2. [Functional components in fish and algae oils].

    PubMed

    Conchillo, A; Valencia, I; Puente, A; Ansorena, D; Astiasarán, I

    2006-01-01

    An important area of the development of new functional foods is facussed on finding or applying food components which favour achieving a healthier lipid profile in the organism. The objective of this work was to carry out the characterisation of the lipid fraction of two oils, fish oil and algae oil, to evaluate their potential use as functional ingredients, in relation to the high molecular weight fatty acid content and the presence of sterols and other components of the unsaponificable fraction. Both oils showed a lipid fraction rich in high molecular weight polyunsaturated omega-3 fatty acids, containing a 33.75% in the fish oil and a 43.97% in the algae oil. Eicosapentaenoic acid was the major fatty acid in fish oil, whereas docosahexaenoic was the most abundant fatty acid in algae oil. The omega-6/omega-3 ratio was lower than 0.4 in both oils. In the unsaponificable fraction, algae oil had a Mold lower cholesterol content and a higher proportion of squalene than fish oil. The phytosterol content was significantly higher in the algae oil.

  3. A tale of two seagrasses: Comparing the science and management of Zostera marina and Zostera japonica in the Pacific Northwest - CERF

    EPA Science Inventory

    On the Pacific coast of North America, at least two congeners of Zostera occur: native Z. marina, and introduced, Z. japonica. Z. marina is protected by State and Federal laws as essential fish habitat. Z. japonica is considered “invasive” and therefore, ecologicall...

  4. A tale of two seagrasses: Comparing the science and management of Zostera marina and Zostera japonica in the Pacific Northwest - CERF

    EPA Science Inventory

    On the Pacific coast of North America, at least two congeners of Zostera occur: native Z. marina, and introduced, Z. japonica. Z. marina is protected by State and Federal laws as essential fish habitat. Z. japonica is considered “invasive” and therefore, ecologicall...

  5. Description of Cobetia amphilecti sp. nov., Cobetia litoralis sp. nov. and Cobetia pacifica sp. nov., classification of Halomonas halodurans as a later heterotypic synonym of Cobetia marina and emended descriptions of the genus Cobetia and Cobetia marina.

    PubMed

    Romanenko, Lyudmila A; Tanaka, Naoto; Svetashev, Vassilii I; Falsen, Enevold

    2013-01-01

    A group of five Gram-negative, aerobic, halotolerant, non-pigmented bacteria isolated from shallow sediment samples and invertebrate specimens collected from the Gulf of Alaska and the Sea of Japan was subjected to taxonomic study. On the basis of 16S rRNA gene sequence analysis, the novel isolates were affiliated to the genus Cobetia, sharing the highest sequence similarity of 99.3-99.9 % with Cobetia marina DSM 4741(T). DNA-DNA hybridization experiments between and among the novel strains and C. marina DSM 4741(T) and Cobetia crustatorum JCM 15644(T) revealed that the five strains represent three separate genospecies, which could be differentiated in their morphological, physiological and biochemical characteristics. Halomonas halodurans NBRC 15607(T) was included in this study as it has recently been reported to exhibit high 16S rRNA gene sequence similarity to C. marina DSM 4741(T), and it showed a high DNA relatedness value of 96 % with C. marina DSM 4741(T), indicating that they belong to the same species. On the basis of phylogenetic analysis, DNA-DNA hybridization and phenotypic characterization, three novel species are proposed, named Cobetia amphilecti sp. nov. (type strain KMM 1561(T) = NRIC 0815(T) = CCUG 49560(T)), Cobetia litoralis sp. nov. (type strain KMM 3880(T) =NRIC 0814(T) =CCUG 49563(T)) and Cobetia pacifica sp. nov. (type strain KMM 3879(T) = NRIC 0813(T) = CCUG 49562(T)). It is also proposed that Halomonas halodurans is a later heterotypic synonym of Cobetia marina, and emended descriptions of the genus Cobetia and the species Cobetia marina are provided.

  6. Snow algae-microbe-mineral interactions and implications for snow algae growth

    NASA Astrophysics Data System (ADS)

    Tschauner, O. D.; Harrold, Z.; Hausrath, E.; Garcia, A. H.; Murray, A. E.; Raymond, J. A.; Bartlett, C. L.

    2016-12-01

    Snow algae, which can reach densities of millions of cells per mL [1], can accelerate the melting of snow and ice fields by significantly lowering their albedo [2-4]. Studies have even suggested the effect of snow algae on albedo should be considered in quantitative albedo models. One of the factors controlling snow algae growth is nutrient availability. Previous observations of minerals and microbes attached to the cell walls of snow algae, and the preferential growth of snow algae in dusty snow, have suggested that snow algae-microbe-mineral interactions may help snow algae meet their trace nutrient needs. Understanding how snow algae are able to reach such high concentrations in a low nutrient snow environment is critical for predicting the extent to which snow algae blooms can impact snow albedo, snow and ice melt rate, and global climate change. We use synchrotron X-ray fluorescence (XRF), X-ray diffraction (XRD) and X-ray absorption near edge structure (XANES) to study the interactions between snow algae, microbes and minerals in both field and laboratory samples. Field samples were collected from Mt. Anderson Ridge, CA, and prepared using a Percoll density separation technique to isolate algae cells from bulk dust. Cell and mineral fractions were analyzed using synchrotron micro-XRF, micro-XRD and XANES. Results show the presence of ferric material similar to ferrihydrite surrounding snow alga. Growth experiments of xenic Chloromonas brevispina cultures incubated with Fe-bearing minerals, including nontronite, goethite, pyrite and olivine, suggest Fe-bearing minerals can support snow algae growth. Synchrotron XRF, XRD and XANES analyses of Cr. brevispinaalgae cell communities indicate the formation of cell-associated Fe-bearing mineral phases not present in the unreacted minerals. The sample preparation and synchrotron techniques described herein provide an approach for investigating a wide range of microbe-mineral interactions and their impacts on microbial

  7. Constitution and energetics of photosystem I and photosystem II in the chlorophyll d-dominated cyanobacterium Acaryochloris marina.

    PubMed

    Tomo, Tatsuya; Allakhverdiev, Suleyman I; Mimuro, Mamoru

    2011-01-01

    This mini review presents current topics of discussion about photosystem (PS) I and PS II of photosynthesis in the Acaryochloris marina. A. marina is a photosynthetic cyanobacterium in which chlorophyll (Chl) d is the major antenna pigment (>95%). However, Chl a is always present in a few percent. Chl d absorbs light with a wavelength up to 30 nm red-shifted from Chl a. Therefore, the chlorophyll species of the special pair in PS II has been a matter of debate because if Chl d was the special pair component, the overall energetics must be different in A. marina. The history of this field indicates that a purified sample is necessary for the reliable identification and characterization of the special pair. In view of the spectroscopic data and the redox potential of pheophytin, we discuss the nature of special pair constituents and the localization of the enigmatic Chl a.

  8. Evaluation of Protective Efficacy of Avicennia marina (Forssk.) Vierh Leaves against Complete Freund᾽s Adjuvant-induced Arthritis in Wistar

    PubMed Central

    Zamani Gandomani, Mahdi; Forouzandeh Malati, Elaheh

    2014-01-01

    Aviecennia marina (Avicenniaceae) is an endemic plant that widely distributed in the Southern parts of Iran. This plant has been used as treatment of rheumatism arthritis among the inhabitants of Southern parts of Iran. The Avicennia marina hydroalcoholic extract was prepared and its protective efficacy was investigated using measurement of ankle diameter, total WBC and RBC count, ESR, and Pro-inflammatory cytokines levels in the complete Freund᾽s adjuvant (CFA)-induced arthritic rat. The increment in ESR and total WBC, reduction in RBC count and hemoglobin levels observed in the arthritic animals were also found to be significantly restored in HEA treated rats. A. marina at 400 mg/Kg significantly decreases the serum pro-inflammatory cytokines as well as normalizes ankle diameter of CFA rats. A. marina (400 mg/Kg) significantly normalizes changes observed in arthritic rats to near normal conditions, indicates that A. marina has promising protective efficacy against arthritic rats. PMID:25276195

  9. Evaluation of Protective Efficacy of Avicennia marina (Forssk.) Vierh Leaves against Complete Freund᾽s Adjuvant-induced Arthritis in Wistar.

    PubMed

    Zamani Gandomani, Mahdi; Forouzandeh Malati, Elaheh

    2014-01-01

    Aviecennia marina (Avicenniaceae) is an endemic plant that widely distributed in the Southern parts of Iran. This plant has been used as treatment of rheumatism arthritis among the inhabitants of Southern parts of Iran. The Avicennia marina hydroalcoholic extract was prepared and its protective efficacy was investigated using measurement of ankle diameter, total WBC and RBC count, ESR, and Pro-inflammatory cytokines levels in the complete Freund᾽s adjuvant (CFA)-induced arthritic rat. The increment in ESR and total WBC, reduction in RBC count and hemoglobin levels observed in the arthritic animals were also found to be significantly restored in HEA treated rats. A. marina at 400 mg/Kg significantly decreases the serum pro-inflammatory cytokines as well as normalizes ankle diameter of CFA rats. A. marina (400 mg/Kg) significantly normalizes changes observed in arthritic rats to near normal conditions, indicates that A. marina has promising protective efficacy against arthritic rats.

  10. Genome of the red alga Porphyridium purpureum

    PubMed Central

    Bhattacharya, Debashish; Price, Dana C.; Xin Chan, Cheong; Qiu, Huan; Rose, Nicholas; Ball, Steven; Weber, Andreas P. M.; Cecilia Arias, Maria; Henrissat, Bernard; Coutinho, Pedro M.; Krishnan, Anagha; Zäuner, Simone; Morath, Shannon; Hilliou, Frédérique; Egizi, Andrea; Perrineau, Marie-Mathilde; Yoon, Hwan Su

    2013-01-01

    The limited knowledge we have about red algal genomes comes from the highly specialized extremophiles, Cyanidiophyceae. Here, we describe the first genome sequence from a mesophilic, unicellular red alga, Porphyridium purpureum. The 8,355 predicted genes in P. purpureum, hundreds of which are likely to be implicated in a history of horizontal gene transfer, reside in a genome of 19.7 Mbp with 235 spliceosomal introns. Analysis of light-harvesting complex proteins reveals a nuclear-encoded phycobiliprotein in the alga. We uncover a complex set of carbohydrate-active enzymes, identify the genes required for the methylerythritol phosphate pathway of isoprenoid biosynthesis, and find evidence of sexual reproduction. Analysis of the compact, function-rich genome of P. purpureum suggests that ancestral lineages of red algae acted as mediators of horizontal gene transfer between prokaryotes and photosynthetic eukaryotes, thereby significantly enriching genomes across the tree of photosynthetic life. PMID:23770768

  11. Genome of the red alga Porphyridium purpureum.

    PubMed

    Bhattacharya, Debashish; Price, Dana C; Chan, Cheong Xin; Qiu, Huan; Rose, Nicholas; Ball, Steven; Weber, Andreas P M; Arias, Maria Cecilia; Henrissat, Bernard; Coutinho, Pedro M; Krishnan, Anagha; Zäuner, Simone; Morath, Shannon; Hilliou, Frédérique; Egizi, Andrea; Perrineau, Marie-Mathilde; Yoon, Hwan Su

    2013-01-01

    The limited knowledge we have about red algal genomes comes from the highly specialized extremophiles, Cyanidiophyceae. Here, we describe the first genome sequence from a mesophilic, unicellular red alga, Porphyridium purpureum. The 8,355 predicted genes in P. purpureum, hundreds of which are likely to be implicated in a history of horizontal gene transfer, reside in a genome of 19.7 Mbp with 235 spliceosomal introns. Analysis of light-harvesting complex proteins reveals a nuclear-encoded phycobiliprotein in the alga. We uncover a complex set of carbohydrate-active enzymes, identify the genes required for the methylerythritol phosphate pathway of isoprenoid biosynthesis, and find evidence of sexual reproduction. Analysis of the compact, function-rich genome of P. purpureum suggests that ancestral lineages of red algae acted as mediators of horizontal gene transfer between prokaryotes and photosynthetic eukaryotes, thereby significantly enriching genomes across the tree of photosynthetic life.

  12. Algae control problems and practices workshop

    SciTech Connect

    Pryfogle, P.A.; Ghio, G.

    1996-09-01

    Western water resources are continuously facing increased demand from industry and the public. Consequently, many of these resources are required to perform multiple tasks as they cycle through the ecosystem. Many plants and animals depend upon these resources for growth. Algae are one group of plants associated with nutrient and energy cycles in many aquatic ecosystems. Although most freshwater algae are microscopic in size, they are capable of dominating and proliferating to the extent that the value of the water resource for both industrial and domestic needs is compromised. There is a great diversity of aquatic environments and systems in which algae may be found, and there are many varieties of treatment and control techniques available to reduce the impacts of excessive growth. This workshop was organized to exchange information about these control problems and practices.

  13. Turning Algae into Energy in New Mexico

    ScienceCinema

    Sayre, Richard; Olivares, Jose; Lammers, Peter

    2016-07-12

    Los Alamos National Laboratory, as part of the New Mexico Consortium - comprised of New Mexico's major research universities, the Lab, and key industry partners - is conducting research into using algae as a feed stock for a renewable source of fuels, and other products. There are hundreds of thousands of different algae species on Earth. They account for approximately half of the net photosynthesis on the planet, yet they have not been used in any kind of a large scale by humanity, with just a few exceptions. And yet, the biomass is easy to transform into useful products, including fuels, and they contain many other natural products that have high value. In this video Los Alamos and New Mexico State University scientists outline the opportunities and challenges of using science to turn algae into energy.

  14. Turning Algae into Energy in New Mexico

    SciTech Connect

    Sayre, Richard; Olivares, Jose; Lammers, Peter

    2013-07-29

    Los Alamos National Laboratory, as part of the New Mexico Consortium - comprised of New Mexico's major research universities, the Lab, and key industry partners - is conducting research into using algae as a feed stock for a renewable source of fuels, and other products. There are hundreds of thousands of different algae species on Earth. They account for approximately half of the net photosynthesis on the planet, yet they have not been used in any kind of a large scale by humanity, with just a few exceptions. And yet, the biomass is easy to transform into useful products, including fuels, and they contain many other natural products that have high value. In this video Los Alamos and New Mexico State University scientists outline the opportunities and challenges of using science to turn algae into energy.

  15. Lipids and lipid metabolism in eukaryotic algae.

    PubMed

    Guschina, Irina A; Harwood, John L

    2006-03-01

    Eukaryotic algae are a very diverse group of organisms which inhabit a huge range of ecosystems from the Antarctic to deserts. They account for over half the primary productivity at the base of the food chain. In recent years studies on the lipid biochemistry of algae has shifted from experiments with a few model organisms to encompass a much larger number of, often unusual, algae. This has led to the discovery of new compounds, including major membrane components, as well as the elucidation of lipid signalling pathways. A major drive in recent research have been attempts to discover genes that code for expression of the various proteins involved in the production of very long-chain polyunsaturated fatty acids such as arachidonic, eicosapentaenoic and docosahexaenoic acids. Such work is described here together with information about how environmental factors, such as light, temperature or minerals, can change algal lipid metabolism and how adaptation may take place.

  16. Study of metal bioaccumulation by nuclear microprobe analysis of algae fossils and living algae cells

    NASA Astrophysics Data System (ADS)

    Guo, P.; Wang, J.; Li, X.; Zhu, J.; Reinert, T.; Heitmann, J.; Spemann, D.; Vogt, J.; Flagmeyer, R.-H.; Butz, T.

    2000-03-01

    Microscopic ion-beam analysis of palaeo-algae fossils and living green algae cells have been performed to study the metal bioaccumulation processes. The algae fossils, both single cellular and multicellular, are from the late Neoproterozonic (570 million years ago) ocean and perfectly preserved within a phosphorite formation. The biosorption of the rare earth element ions Nd 3+ by the green algae species euglena gracilis was investigated with a comparison between the normal cells and immobilized ones. The new Leipzig Nanoprobe, LIPSION, was used to produce a proton beam with 2 μm size and 0.5 nA beam current for this study. PIXE and RBS techniques were used for analysis and imaging. The observation of small metal rich spores ( <10 μm) surrounding both of the fossils and the living cells proved the existence of some specific receptor sites which bind metal carrier ligands at the microbic surface. The bioaccumulation efficiency of neodymium by the algae cells was 10 times higher for immobilized algae cells. It confirms the fact that the algae immobilization is an useful technique to improve its metal bioaccumulation.

  17. Light-Promoted Rhodopsin Expression and Starvation Survival in the Marine Dinoflagellate Oxyrrhis marina

    PubMed Central

    Guo, Zhiling; Zhang, Huan; Lin, Senjie

    2014-01-01

    The discovery of microbial rhodopsins in marine proteobacteria changed the dogma that photosynthesis is the only pathway to use the solar energy for biological utilization in the marine environment. Although homologs of these rhodopsins have been identified in dinoflagellates, the diversity of the encoding genes and their physiological roles remain unexplored. As an initial step toward addressing the gap, we conducted high-throughput transcriptome sequencing on Oxyrrhis marina to retrieve rhodopsin transcripts, rapid amplification of cDNA ends to isolate full-length cDNAs of dominant representatives, and quantitative reverse-transcription PCR to investigate their expression under varying conditions. Our phylogenetic analyses showed that O. marina contained both the proton-pumping type (PR) and sensory type (SR) rhodopsins, and the transcriptome data showed that the PR type dominated over the SR type. We compared rhodopsin gene expression for cultures kept under light: dark cycle and continuous darkness in a time course of 24 days without feeding. Although both types of rhodopsin were expressed under the two conditions, the expression levels of PR were much higher than SR, consistent with the transcriptomic data. Furthermore, relative to cultures kept in the dark, rhodopsin expression levels and cell survival rate were both higher in cultures grown in the light. This is the first report of light-dependent promotion of starvation survival and concomitant promotion of PR expression in a eukaryote. While direct evidence needs to come from functional test on rhodopsins in vitro or gene knockout/knockdown experiments, our results suggest that the proton-pumping rhodopsin might be responsible for the light-enhanced survival of O. marina, as previously demonstrated in bacteria. PMID:25506945

  18. Influence of light, temperature and salinity on dissolved organic carbon exudation rates in Zostera marina L.

    PubMed Central

    2012-01-01

    Background Marine angiosperms, seagrasses, are sentinel species of marine ecosystem health and function. Seagrass carbon budgets provide insight on the minimum requirements needed to maintain this valuable resource. Carbon budgets are a balance between C fixation, growth, storage and loss rates, most of which are well characterized. However, relatively few measurements of dissolved organic carbon (DOC) leaf exudation or rhizodeposition rates exist for most seagrass species. Here I evaluate how eelgrass (Zostera marina L.) DOC exudation is affected by a single factor manipulation (light, temperature or salinity). Eelgrass plants were hydroponically exposed to treatments in experimental chambers (separate leaf and rhizome/root compartments) with artificial seawater medium. Regression analysis of changes in the DOC concentration through time was used to calculate DOC exudation rates. Results Exudation rates were similar across all treatments in all experiments. For all experiments, pooled leaf DOC exudation ranged between 0.032 and 0.069 mg C gdw-1 h-1, while rhizodeposition ranged between 0.024 and 0.045 mg C gdw-1 h-1. These rates are consistent with previously published values and provide first-order estimates for mechanistic models. Conclusions Zostera marina carbon losses from either leaf exudation or rhizodeposition account for a small proportion of gross primary production (1.2-4.6%) and appear to be insensitive to short-term (e.g., hours to days) environmental variations in chamber experiments. Based on these preliminary experiments, I suggest that Z. marina DOC exudation may be a passive process and not an active transport process. PMID:22938529

  19. Biology of the Marine Heterotrophic Dinoflagellate Oxyrrhis marina: Current Status and Future Directions.

    PubMed

    Guo, Zhiling; Zhang, Huan; Liu, Sheng; Lin, Senjie

    2013-10-21

    Heterotrophic dinoflagellates are prevalent protists in marine environments, which play an important role in the carbon cycling and energy flow in the marine planktonic community. Oxyrrhismarina (Dinophyceae), a widespread heterotrophic dinoflagellate, is a model species used for a broad range of ecological, biogeographic, and evolutionary studies. Despite the increasing research effort on this species, there lacks a synthesis of the existing data and a coherent picture of this organism. Here we reviewed the literature to provide an overview of what is known regarding the biology of O. marina, and identify areas where further studies are needed. As an early branch of the dinoflagellate lineage, O. marina shares similarity with typical dinoflagellates in permanent condensed chromosomes, less abundant nucleosome proteins compared to other eukaryotes, multiple gene copies, the occurrence of trans-splicing in nucleus-encoded mRNAs, highly fragmented mitochondrial genome, and disuse of ATG as a start codon for mitochondrial genes. On the other hand, O. marina also exhibits some distinct cytological features (e.g., different flagellar structure, absence of girdle and sulcus or pustules, use of intranuclear spindle in mitosis, presence of nuclear plaque, and absence of birefringent periodic banded chromosomal structure) and genetic features (e.g., a single histone-like DNA-associated protein, cob-cox3 gene fusion, 5' oligo-U cap in the mitochondrial transcripts of protein-coding genes, the absence of mRNA editing, the presence of stop codon in the fused cob-cox3 mRNA produced by post-transcriptional oligoadenylation, and vestigial plastid genes). The best-studied biology of this dinoflagellate is probably the prey and predators types, which include a wide range of organisms. On the other hand, the abundance of this species in the natural waters and its controlling factors, genome organization and gene expression regulation that underlie the unusual cytological and

  20. Antiproliferative activity and chemical composition of the venom from the Amazonian toad Rhinella marina (Anura: Bufonidae).

    PubMed

    Schmeda-Hirschmann, Guillermo; Quispe, Cristina; Arana, Gabriel Vargas; Theoduloz, Cristina; Urra, Félix A; Cárdenas, César

    2016-10-01

    Little is known on the composition of Peruvian Amazon toad venoms. The large toad Rhinella marina is common in the cleared tropical forests of the Iquitos region and is regarded as poisonous. The venom from two different populations of R. marina was collected in the Departamento de Loreto, Perú. The samples were assessed for antiproliferative effect and composition. Some 29 compounds were identified or tentatively identified from the venom by spectroscopic and spectrometric means. The main free bufadienolide was marinobufagin 7 while marinobufotoxin 15 and bufalitoxin 9 were the main bufadienolide argininyl diacid derivatives. The alkaloids dehydrobufotenin 28 and bufotenidin 29 were present in both venoms. The main difference in the venoms was the relative ratio of argininyl diacids from bufadienolides to free bufadienolides. The argininyl diacids included derivatives from bufalin, marinobufagin, telocinobufagin, hellebrigenin, resibufogenin and bufotalinin. Four compounds, including undecadienoyl aginine 6 and three argininyl diacids from bufadienolides were tentatively identified for the first time in the samples. The venom showed a strong antiproliferative effect towards MRC-5 normal human lung fibroblasts (0.063-0.247 μg/mL), AGS human gastric adenocarcinoma cells (0.076-0.272 μg/mL), SK-MES-1 human lung cancer cells (0.154-0.296 μg/mL), J82 human bladder carcinoma cells (0.169-0.212 μg/mL), and HL-60 human promyelocytic leukemia (0.071-0.283 μg/mL). The antiproliferative effect is mediated by ROS production and cell cycle arrest in human breast cancer cells (MCF7 and MDA-MB-231). This is the first report on the composition of R. marina venom from the Peruvian Amazon pointing out the need to include different venom samples to get a better picture from the activity and composition of South American toad defense substances. Copyright © 2016 Elsevier Ltd. All rights reserved.

  1. Photosystem Trap Energies and Spectrally-Dependent Energy-Storage Efficiencies in the Chl d-Utilizing Cyanobacterium, Acaryochloris Marina

    NASA Technical Reports Server (NTRS)

    Mielke, Steven P.; Kiang, Nancy Y.; Blankenship, Robert E.; Mauzerall, David

    2012-01-01

    Acaryochloris marina is the only species known to utilize chlorophyll (Chl) d as a principal photopigment. The peak absorption wavelength of Chl d is redshifted approx. 40 nm in vivo relative to Chl a, enabling this cyanobacterium to perform oxygenic phototrophy in niche environments enhanced in far-red light. We present measurements of the in vivo energy-storage (E-S) efficiency of photosynthesis in A. marina, obtained using pulsed photoacoustics (PA) over a 90-nm range of excitation wavelengths in the red and far-red. Together with modeling results, these measurements provide the first direct observation of the trap energies of PSI and PSII, and also the photosystem-specific contributions to the total E-S efficiency. We find the maximum observed efficiency in A. marina (40+/-1% at 735 nm) is higher than in the Chl a cyanobacterium Synechococcus leopoliensis (35+/-1% at 690 nm). The efficiency at peak absorption wavelength is also higher in A. marina (36+/-1% at 710 nm vs. 31+/-1% at 670 nm). In both species, the trap efficiencies are approx. 40% (PSI) and approx. 30% (PSII). The PSI trap in A. marina is found to lie at 740+/-5 nm, in agreement with the value inferred from spectroscopic methods. The best fit of the model to the PA data identifies the PSII trap at 723+/-3 nm, supporting the view that the primary electron-donor is Chl d, probably at the accessory (ChlD1) site. A decrease in efficiency beyond the trap wavelength, consistent with uphill energy transfer, is clearly observed and fit by the model. These results demonstrate that the E-S efficiency in A. marina is not thermodynamically limited, suggesting that oxygenic photosynthesis is viable in even redder light environments.

  2. Biofilm Growth and Near-Infrared Radiation-Driven Photosynthesis of the Chlorophyll d-Containing Cyanobacterium Acaryochloris marina

    PubMed Central

    Behrendt, Lars; Schrameyer, Verena; Qvortrup, Klaus; Lundin, Luisa; Sørensen, Søren J.; Larkum, Anthony W. D.

    2012-01-01

    The cyanobacterium Acaryochloris marina is the only known phototroph harboring chlorophyll (Chl) d. It is easy to cultivate it in a planktonic growth mode, and A. marina cultures have been subject to detailed biochemical and biophysical characterization. In natural situations, A. marina is mainly found associated with surfaces, but this growth mode has not been studied yet. Here, we show that the A. marina type strain MBIC11017 inoculated into alginate beads forms dense biofilm-like cell clusters, as in natural A. marina biofilms, characterized by strong O2 concentration gradients that change with irradiance. Biofilm growth under both visible radiation (VIS, 400 to 700 nm) and near-infrared radiation (NIR, ∼700 to 730 nm) yielded maximal cell-specific growth rates of 0.38 per day and 0.64 per day, respectively. The population doubling times were 1.09 and 1.82 days for NIR and visible light, respectively. The photosynthesis versus irradiance curves showed saturation at a photon irradiance of Ek (saturating irradiance) >250 μmol photons m−2 s−1 for blue light but no clear saturation at 365 μmol photons m−2 s−1 for NIR. The maximal gross photosynthesis rates in the aggregates were ∼1,272 μmol O2 mg Chl d−1 h−1 (NIR) and ∼1,128 μmol O2 mg Chl d−1 h−1 (VIS). The photosynthetic efficiency (α) values were higher in NIR-irradiated cells [(268 ± 0.29) × 10−6 m2 mg Chl d−1 (mean ± standard deviation)] than under blue light [(231 ± 0.22) × 10−6 m2 mg Chl d−1]. A. marina is well adapted to a biofilm growth mode under both visible and NIR irradiance and under O2 conditions ranging from anoxia to hyperoxia, explaining its presence in natural niches with similar environmental conditions. PMID:22467501

  3. Notable alkaline tolerance of Kocuria marina isolate from blood of a pediatric patient with continuous intravenous epoprostenol therapy.

    PubMed

    Horiuchi, Ayaka; Kubota, Noriko; Hidaka, Eiko; Shimabukuro, Atsuya; Yasukochi, Satoshi; Nakamura, Tomohiko; Oana, Kozue; Kawakami, Yoshiyuki

    2015-09-01

    This study was the first to describe the hitherto deficiently evaluated alkaline tolerance of Kocuria marina isolate from a pediatric patient with continuous intravenous epoprostenol dosing therapy. Our isolate from blood of a 7-year-old Japanese boy was finally identified as K. marina by the morphological, cultural, and biochemical properties together with the comparative sequence analyses of the 16S rRNA genes. The K. marina isolate, the causative agent of catheter-related blood-stream infection, was not only revealed to be salt tolerant (NaCl 15%), but also demonstrated to be stably survived with no apparent decrease of cell counts for long periods (120 h) in an alkaline environment (pH 8, 9, 10, and 11) at 35 °C. Its remarkable tolerance to the stresses of high alkalinity compared with a clinical Staphylococcus aureus strain should provide consistent interpretation that the environment of high alkalinity (pH 10.2-10.8) measures should be insufficient to inactivate almost all the causative agents including K. marina strains in the solution of epoprostenol (pH 10.4) (Flolan(®), GlaxoSmithKline, Ltd., Tokyo, Japan.). To the best of our knowledge, the first description of the property of being tolerant to high alkalinity that the K. marina isolate exhibited was noteworthy and a useful piece of information. In conclusion, we believe that the present study should be a notification regarding the potential risk of catheter-related blood-stream infections due to K. marina, suggestive of an alkalophile, especially in patients receiving continuous intravenous epoprostenol dosing therapy. Copyright © 2015 Japanese Society of Chemotherapy and The Japanese Association for Infectious Diseases. Published by Elsevier Ltd. All rights reserved.

  4. An assessment of site suitability for marina construction in Istanbul, Turkey, using GIS and AHP multicriteria decision analysis.

    PubMed

    Gumusay, Mustafa Umit; Koseoglu, Gokalp; Bakirman, Tolga

    2016-12-01

    Marinas play a key role in sea transportation and tourism. The problem of an insufficient marina capacity has revealed in terms of sea traffic due to the demographic structure and increasing tourism potential of Istanbul which is the biggest metropolitan city of Turkey and has around 600-km-long coastline. Therefore, the study area is mainly focused on the Marmara Sea shoreline of Istanbul. Rather than traditional methods, a rapid and cost-effective solution which considers natural and urban environment conditions is essential to satisfy the need for a marina site selection. Thanks to the latest improvements in geographic information systems, it is convenient to perform location selection analysis of marinas taking advantages of geology, land use, demography and accessibility data sets. The goal of this study is to define the areas that are appropriate for building marinas, with the use of topographic and demographic data in a present shoreline applying analytical hierarchy process multicriteria decision-making method. In this study, erosion, landslide, tsunami, land use, geologically hazardous areas, transfer lines, sea traffic data, neighbourhood scale population, age patterns and house income data have been used. Analytical hierarchy process method is used to give a weight to each data set, and a grading system has been developed for the area selection of marinas. The result maps of the analysis that show study area as classified into four categories from good to not suitable are presented. It is possible to create a decision support system for upper scale plans that enable authorities to perform analysis accurately, cost and time effectively using the proposed methodology that integrates multiple data sets with different scales and types.

  5. Heavy metal contamination in sediments and mangroves from the coast of Red Sea: Avicennia marina as potential metal bioaccumulator.

    PubMed

    Usman, Adel R A; Alkredaa, Raed S; Al-Wabel, M I

    2013-11-01

    The aim of this study was to investigate the concentrations and pollution status of heavy metals (Cu, Cd, Ni, Pb, Zn and Cr) in the mangrove surface sediments from the Farasan Island, Coast of Red Sea, Saudi Arabia. The ability of mangroves (Avicennia marina) to accumulate and translocate heavy metal within their different compartments was also investigated. Five sampling sites were chosen for collection of sediments and different compartments (leaf, branch and root) of A. marina. The results showed that the maximum and average concentrations of Cd, Cu and Pb in the studied area exceeded their world average concentration of shale. Additionally, only the maximum concentration of Zn exceeded its world average shale concentration. Based on the quality guidelines of sediment (SQGs), the collected sediment samples were in moderate to heavy rate for Cu, non-polluted to heavy rate for Pb and Zn, and non-polluted to moderate rate for Cr and Ni. The average metal concentrations of A. marina in the studied area were observed in the order Cu (256.0-356.6mgkg(-1))>Zn (29.5-36.8mgkg(-1))>Cr (8.15-14.9mgkg(-1))>Ni (1.37-4.02mgkg(-1))>Cd (not detectable-1.04mgkg(-1))>Pb (not detectable). Based on bio-concentration factors (BCF), their most obtained values were considered too high (>1), suggesting that A. marina can be considered as a high-efficient plant for bioaccumulation of heavy metals. Among all metals, Cu and Cr were highly bio-accumulated in different parts of A. marina. In terms of heavy metal contamination control via phyto-extraction, our findings suggest also that A. marina may be classified as potential accumulator for Cu in aboveground parts, as indicated by higher metal accumulation in the leaves combined with bio-concentration factor (BCF) and translocation factor (TF) values >1.

  6. Biofilm growth and near-infrared radiation-driven photosynthesis of the chlorophyll d-containing cyanobacterium Acaryochloris marina.

    PubMed

    Behrendt, Lars; Schrameyer, Verena; Qvortrup, Klaus; Lundin, Luisa; Sørensen, Søren J; Larkum, Anthony W D; Kühl, Michael

    2012-06-01

    The cyanobacterium Acaryochloris marina is the only known phototroph harboring chlorophyll (Chl) d. It is easy to cultivate it in a planktonic growth mode, and A. marina cultures have been subject to detailed biochemical and biophysical characterization. In natural situations, A. marina is mainly found associated with surfaces, but this growth mode has not been studied yet. Here, we show that the A. marina type strain MBIC11017 inoculated into alginate beads forms dense biofilm-like cell clusters, as in natural A. marina biofilms, characterized by strong O(2) concentration gradients that change with irradiance. Biofilm growth under both visible radiation (VIS, 400 to 700 nm) and near-infrared radiation (NIR, ∼700 to 730 nm) yielded maximal cell-specific growth rates of 0.38 per day and 0.64 per day, respectively. The population doubling times were 1.09 and 1.82 days for NIR and visible light, respectively. The photosynthesis versus irradiance curves showed saturation at a photon irradiance of E(k) (saturating irradiance) >250 μmol photons m(-2) s(-1) for blue light but no clear saturation at 365 μmol photons m(-2) s(-1) for NIR. The maximal gross photosynthesis rates in the aggregates were ∼1,272 μmol O(2) mg Chl d(-1) h(-1) (NIR) and ∼1,128 μmol O(2) mg Chl d(-1) h(-1) (VIS). The photosynthetic efficiency (α) values were higher in NIR-irradiated cells [(268 ± 0.29) × 10(-6) m(2) mg Chl d(-1) (mean ± standard deviation)] than under blue light [(231 ± 0.22) × 10(-6) m(2) mg Chl d(-1)]. A. marina is well adapted to a biofilm growth mode under both visible and NIR irradiance and under O(2) conditions ranging from anoxia to hyperoxia, explaining its presence in natural niches with similar environmental conditions.

  7. Nutrient and caloric dynamics in Avicennia marina leaves at different developmental and decay stages in Zhangjiang River Estuary, China

    NASA Astrophysics Data System (ADS)

    Zhou, Hai-Chao; Wei, Shu-Dong; Zeng, Qi; Zhang, Li-Hua; Tam, Nora Fung-yee; Lin, Yi-Ming

    2010-03-01

    Avicennia marina is a typical mangrove species in the subtropical coastlines of China. The main objective of this study was to assess nutrient and caloric dynamics in A. marina leaves at different developmental and decay stages. Decomposition studies using litter bags suggested that the time required for the loss of half of the initial dry weight ( t50) was 19 days. The extracts of A. marina leaves contained non-tannin phenolics and tannin phenolics (hydrolysable tannin), but no condensed tannin. Non-tannin phenolics and tannin phenolics contents did not differ significantly from each other at various developmental stages, but decreased rapidly during leaf decomposition. Avicennia marina leaves had high N levels, and both N and P concentrations decreased significantly during senescence. During decomposition, N concentration of the leaf litter increased gradually but the phosphorus concentration showed a decrease in the first week, and both N and P remained the same towards the end of the experiment. The gross caloric value (GCV) of mature leaves was significantly higher than those of young and senescent leaves, while ash-free caloric value (AFCV) did not change significantly during leaf development and senescence. During leaf decomposition, both GCV and AFCV increased gradually and remained the same at late stages. In subtropical Zhangjiang River Estuary, high N levels and lack of condensed tannins in A. marina leaves were responsible for the fast rate of decay. Non-tannin phenolics and tannin phenolics had no great effect on rate of decay. Nitrogen resorption during leaf senescence, and high litter decomposition followed by nitrogen immobilization are the important nutrient conservation strategy for A. marina.

  8. Photosystem Trap Energies and Spectrally-Dependent Energy-Storage Efficiencies in the Chl d-Utilizing Cyanobacterium, Acaryochloris Marina

    NASA Technical Reports Server (NTRS)

    Mielke, Steven P.; Kiang, Nancy Y.; Blankenship, Robert E.; Mauzerall, David

    2012-01-01

    Acaryochloris marina is the only species known to utilize chlorophyll (Chl) d as a principal photopigment. The peak absorption wavelength of Chl d is redshifted approx. 40 nm in vivo relative to Chl a, enabling this cyanobacterium to perform oxygenic phototrophy in niche environments enhanced in far-red light. We present measurements of the in vivo energy-storage (E-S) efficiency of photosynthesis in A. marina, obtained using pulsed photoacoustics (PA) over a 90-nm range of excitation wavelengths in the red and far-red. Together with modeling results, these measurements provide the first direct observation of the trap energies of PSI and PSII, and also the photosystem-specific contributions to the total E-S efficiency. We find the maximum observed efficiency in A. marina (40+/-1% at 735 nm) is higher than in the Chl a cyanobacterium Synechococcus leopoliensis (35+/-1% at 690 nm). The efficiency at peak absorption wavelength is also higher in A. marina (36+/-1% at 710 nm vs. 31+/-1% at 670 nm). In both species, the trap efficiencies are approx. 40% (PSI) and approx. 30% (PSII). The PSI trap in A. marina is found to lie at 740+/-5 nm, in agreement with the value inferred from spectroscopic methods. The best fit of the model to the PA data identifies the PSII trap at 723+/-3 nm, supporting the view that the primary electron-donor is Chl d, probably at the accessory (ChlD1) site. A decrease in efficiency beyond the trap wavelength, consistent with uphill energy transfer, is clearly observed and fit by the model. These results demonstrate that the E-S efficiency in A. marina is not thermodynamically limited, suggesting that oxygenic photosynthesis is viable in even redder light environments.

  9. Two Unrelated 8-Vinyl Reductases Ensure Production of Mature Chlorophylls in Acaryochloris marina

    PubMed Central

    Chen, Guangyu E.; Hitchcock, Andrew; Jackson, Philip J.; Chaudhuri, Roy R.; Dickman, Mark J.; Hunter, C. Neil

    2016-01-01

    ABSTRACT The major photopigment of the cyanobacterium Acaryochloris marina is chlorophyll d, while its direct biosynthetic precursor, chlorophyll a, is also present in the cell. These pigments, along with the majority of chlorophylls utilized by oxygenic phototrophs, carry an ethyl group at the C-8 position of the molecule, having undergone reduction of a vinyl group during biosynthesis. Two unrelated classes of 8-vinyl reductase involved in the biosynthesis of chlorophylls are known to exist, BciA and BciB. The genome of Acaryochloris marina contains open reading frames (ORFs) encoding proteins displaying high sequence similarity to BciA or BciB, although they are annotated as genes involved in transcriptional control (nmrA) and methanogenesis (frhB), respectively. These genes were introduced into an 8-vinyl chlorophyll a-producing ΔbciB strain of Synechocystis sp. strain PCC 6803, and both were shown to restore synthesis of the pigment with an ethyl group at C-8, demonstrating their activities as 8-vinyl reductases. We propose that nmrA and frhB be reassigned as bciA and bciB, respectively; transcript and proteomic analysis of Acaryochloris marina reveal that both bciA and bciB are expressed and their encoded proteins are present in the cell, possibly in order to ensure that all synthesized chlorophyll pigment carries an ethyl group at C-8. Potential reasons for the presence of two 8-vinyl reductases in this strain, which is unique for cyanobacteria, are discussed. IMPORTANCE The cyanobacterium Acaryochloris marina is the best-studied phototrophic organism that uses chlorophyll d for photosynthesis. Unique among cyanobacteria sequenced to date, its genome contains ORFs encoding two unrelated enzymes that catalyze the reduction of the C-8 vinyl group of a precursor molecule to an ethyl group. Carrying a reduced C-8 group may be of particular importance to organisms containing chlorophyll d. Plant genomes also contain orthologs of both of these genes; thus, the

  10. Burial of Zostera marina seeds in sediment inhabited by three polychaetes: Laboratory and field studies

    NASA Astrophysics Data System (ADS)

    Delefosse, M.; Kristensen, E.

    2012-07-01

    The large number of seeds produced by eelgrass, Zostera marina, provides this plant with a potential to disperse widely and colonise new areas. After dispersal, seeds must be buried into sediment for assuring long-term survival, successful germination and safe seedling development. Seeds may be buried passively by sedimentation or actively through sediment reworking by benthic fauna. We evaluated the effect of three polychaetes on the burial rate and depth of eelgrass seeds. Burial was first measured in controlled laboratory experiments using different densities of Nereis (Hediste) diversicolor (400-3200 ind m- 2), Arenicola marina (20-80 ind m- 2), and the invasive Marenzelleria viridis (400-1600 ind m- 2). The obtained results were subsequently compared with burial rates of seed mimics in experimental field plots (1 m2) dominated by the respective polychaetes. High recovery of seeds in the laboratory (97-100%) suggested that none of these polychaetes species feed on eelgrass seeds. N. diversicolor transported seeds rapidly (< 1 day) into its burrow, where they remained buried at a median depth of 0.5 cm. A. marina and M. viridis buried seeds by depositing their faeces on top of the sediment. At their highest abundance, A. marina and M. viridis buried seeds to a median depth of 6.7 cm and 0.5 cm, respectively, after a month. The burial efficiency and depth of these species were, in contrast to N. diversicolor, dependent on animal abundance. Only 2% of seed mimics casted in the field plots were recovered, suggesting that physical dispersion by waves and currents was considerably important for horizontal distribution. However, polychaete affected significantly the vertical distribution of seeds. Overall the effects of these three polychaetes indicate that benthic macroinvertebrates may significantly impact eelgrass seed bank at the ecosystem scale. Some species have a positive effect by burying seeds to shallow depths and thereby reducing seed predation and

  11. Foleyellides rhinellae sp. nov. (Nematoda, Onchocercidae) a new filaria parasitizing Rhinella marina (Anura, Bufonidae) in Mexico.

    PubMed

    García-Prieto, Luis; Ruiz-Torres, Nallely; Osorio-Sarabia, David; Merlo-Serna, Aldo

    2014-09-01

    A new nematode species, Foleyellides rhinellae sp. nov. (Onchocercidae), is described from specimens found in the body cavity of the cane toad, Rhinella marina (Linnaeus) (Anura, Bufonidae), in the Laguna de Coyuca, Guerrero, in the Pacific slope of Mexico. The new species differs from the other nine species of Foleyellides by infecting bufonid anurans and by the number and arrangement of caudal papillae. Other distinguishing feature of the new species is the size of the left spicule (0.16-0.23 long), the smallest recorded among the species included in the genus. Foleyellides rhinellae sp. nov. is the second known species of the genus recorded from amphibians of Mexico.

  12. Microspectroscopy of the photosynthetic compartment of algae.

    PubMed

    Evangelista, Valtere; Frassanito, Anna Maria; Passarelli, Vincenzo; Barsanti, Laura; Gualtieri, Paolo

    2006-01-01

    We performed microspectroscopic evaluation of the pigment composition of the photosynthetic compartments of algae belonging to different taxonomic divisions and higher plants. The feasibility of microspectroscopy for discriminating among species and/or phylogenetic groups was tested on laboratory cultures. Gaussian bands decompositions and a fitting algorithm, together with fourth-derivative transformation of absorbance spectra, provided a reliable discrimination among chlorophylls a, b and c, phycobiliproteins and carotenoids. Comparative analysis of absorption spectra highlighted the evolutionary grouping of the algae into three main lineages in accordance with the most recent endosymbiotic theories.

  13. Use of Brown Algae to Demonstrate Natural Products Techniques.

    ERIC Educational Resources Information Center

    Porter, Lee A.

    1985-01-01

    Background information is provided on the natural products found in marine organisms in general and the brown algae in particular. Also provided are the procedures needed to isolate D-mannitol (a primary metabolite) and cholesterol from brown algae. (JN)

  14. An Overview of Algae Biofuel Production and Potential Environmental Impact

    EPA Science Inventory

    Algae are among the most potentially significant sources of sustainable biofuels in the future of renewable energy. A feedstock with virtually unlimited applicability, algae can metabolize various waste streams (e.g., municipal wastewater, carbon dioxide from industrial flue gas)...

  15. WASP7 BENTHIC ALGAE - MODEL THEORY AND USER'S GUIDE

    EPA Science Inventory

    The standard WASP7 eutrophication module includes nitrogen and phosphorus cycling, dissolved oxygen-organic matter interactions, and phytoplankton kinetics. In many shallow streams and rivers, however, the attached algae (benthic algae, or periphyton, attached to submerged substr...

  16. WASP7 BENTHIC ALGAE - MODEL THEORY AND USER'S GUIDE

    EPA Science Inventory

    The standard WASP7 eutrophication module includes nitrogen and phosphorus cycling, dissolved oxygen-organic matter interactions, and phytoplankton kinetics. In many shallow streams and rivers, however, the attached algae (benthic algae, or periphyton, attached to submerged substr...

  17. Use of Brown Algae to Demonstrate Natural Products Techniques.

    ERIC Educational Resources Information Center

    Porter, Lee A.

    1985-01-01

    Background information is provided on the natural products found in marine organisms in general and the brown algae in particular. Also provided are the procedures needed to isolate D-mannitol (a primary metabolite) and cholesterol from brown algae. (JN)

  18. [Accumulation of polycyclic arenes in Baltic Sea algae].

    PubMed

    Veldre, I A; Itra, A R; Paal'me, L P; Kukk, Kh A

    1985-01-01

    The paper presents data on the level of benzo(a)pyrene (BP) and some other polycyclic arenes in alga and phanerogam specimens from different gulfs of the Baltic Sea. Algae were shown to absorb BP from sea water. The mean concentration of BP in sea water was under 0.004 microgram/1, while in algae it ranged 0.1-21.2 micrograms/kg dry weight. Algae accumulate BP to a higher degree than phanerogams. The highest concentrations of BP were found in algae Enteromorpha while the lowest ones in Furcellaria. In annual green algae, BP level was higher in autumn, i. e. at the end of vegetation period, than in spring. Brown algae Fucus vesiculosus is recommended for monitoring polycyclic arene pollution in the area from Vormsi Island to Käsmu and green algae Cladophora or Enteromorpha in the eastern part of the Finnish Gulf.

  19. An Overview of Algae Biofuel Production and Potential Environmental Impact

    EPA Science Inventory

    Algae are among the most potentially significant sources of sustainable biofuels in the future of renewable energy. A feedstock with virtually unlimited applicability, algae can metabolize various waste streams (e.g., municipal wastewater, carbon dioxide from industrial flue gas)...

  20. Photodegradation of Norfloxacin in aqueous solution containing algae.

    PubMed

    Zhang, Junwei; Fu, Dafang; Wu, Jilong

    2012-01-01

    Photodegradation of Norfloxacin in aqueous solution containing algae under a medium pressure mercury lamp (15 W, lambda(max) = 365 nm) was investigated. Results indicated that the photodegradation of Norfloxacin could be induced by the algae in the heterogeneous algae-water systems. The photodegradation rate of Norfloxacin increased with increasing algae concentration, and was greatly influenced by the temperature and pH of solution. Meanwhile, the cooperation action of algae and Fe(III), and the ultrasound were beneficial to photodegradation of Norfloxacin. The degradation kinetics of Norfloxacin was found to follow the pseudo zero-order reaction in the suspension of algae. In addition, we discussed the photodegradation mechanism of Norfloxacin in the suspension of algae. This work will be helpful for understanding the photochemical degradation of antibiotics in aqueous environment in the presence of algae, for providing a new method to deal with antibiotics pollution.

  1. Morphological characterization of Eustrongylides sp. larvae (Nematoda, Dioctophymatoidea) parasite of Rhinella marina (Amphibia: Bufonidae) from Eastern Amazonia.

    PubMed

    Melo, Francisco Tiago de Vasconcelos; Melo, Caroline do Socorro Barros; Nascimento, Luciana de Cássia Silva do; Giese, Elane Guerreiro; Furtado, Adriano Penha; Santos, Jeannie Nascimento Dos

    2016-06-07

    Absctract Eustrongylides spp. nematodes have birds as final hosts and uses other vertebrates as intermediate/paratenic host (fish, amphibians and reptiles) and have zoonotic potential. In amphibians, the larvae may be located in the subcutaneous tissues, liver and mesentery, between the muscle fibres, especially in the lower limbs. Rhinella marina, which is widely observed in Brazil, has exhibited complex diversity in its helminth fauna, reflecting the unique habitat of the Amazon biome. For the first time, this study describes the morphological aspects of third-stage larvae of Eustrongylides sp. in Rhinella marina from Santa Cruz do Ararí, Marajó Archipelago, Eastern Amazonia, using light and scanning electron microscopy.

  2. Morphological characterization of Eustrongylides sp. larvae (Nematoda, Dioctophymatoidea) parasite of Rhinella marina (Amphibia: Bufonidae) from Eastern Amazonia.

    PubMed

    Melo, Francisco Tiago de Vasconcelos; Melo, Caroline do Socorro Barros; Nascimento, Luciana de Cássia Silva do; Giese, Elane Guerreiro; Furtado, Adriano Penha; Santos, Jeannie Nascimento Dos

    2016-06-07

    Absctract Eustrongylides spp. nematodes have birds as final hosts and uses other vertebrates as intermediate/paratenic host (fish, amphibians and reptiles) and have zoonotic potential. In amphibians, the larvae may be located in the subcutaneous tissues, liver and mesentery, between the muscle fibres, especially in the lower limbs. Rhinella marina, which is widely observed in Brazil, has exhibited complex diversity in its helminth fauna, reflecting the unique habitat of the Amazon biome. For the first time, this study describes the morphological aspects of third-stage larvae of Eustrongylides sp. in Rhinella marina from Santa Cruz do Ararí, Marajó Archipelago, Eastern Amazonia, using light and scanning electron microscopy.

  3. Neonatal sepsis caused by Shewanella algae: A case report.

    PubMed

    Charles, Marie Victor Pravin; Srirangaraj, Sreenivasan; Kali, Arunava

    2015-01-01

    Sepsis remains a leading cause of mortality among neonates, especially in developing countries. Most cases of neonatal sepsis are attributed to Escherichia coli and other members of the Enterobacteriaceae family. Shewanella algae (S. algae) is a gram-negative saprophytic bacillus, commonly associated with the marine environment, which has been isolated from humans. Early onset neonatal sepsis caused by S. algae is uncommon. We report a case of S. algae blood stream infection in a newborn with early onset neonatal sepsis.

  4. How to Identify and Control Water Weeds and Algae.

    ERIC Educational Resources Information Center

    Applied Biochemists, Inc., Mequon, WI.

    Included in this guide to water management are general descriptions of algae, toxic algae, weed problems in lakes, ponds, and canals, and general discussions of mechanical, biological and chemical control methods. In addition, pictures, descriptions, and recommended control methods are given for algae, 6 types of floating weeds, 18 types of…

  5. 21 CFR 73.185 - Haematococcus algae meal.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 21 Food and Drugs 1 2014-04-01 2014-04-01 false Haematococcus algae meal. 73.185 Section 73.185... COLOR ADDITIVES EXEMPT FROM CERTIFICATION Foods § 73.185 Haematococcus algae meal. (a) Identity. (1) The color additive haematococcus algae meal consists of the comminuted and dried cells of the...

  6. 21 CFR 73.185 - Haematococcus algae meal.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 21 Food and Drugs 1 2013-04-01 2013-04-01 false Haematococcus algae meal. 73.185 Section 73.185... COLOR ADDITIVES EXEMPT FROM CERTIFICATION Foods § 73.185 Haematococcus algae meal. (a) Identity. (1) The color additive haematococcus algae meal consists of the comminuted and dried cells of the...

  7. 21 CFR 73.185 - Haematococcus algae meal.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 21 Food and Drugs 1 2010-04-01 2010-04-01 false Haematococcus algae meal. 73.185 Section 73.185... COLOR ADDITIVES EXEMPT FROM CERTIFICATION Foods § 73.185 Haematococcus algae meal. (a) Identity. (1) The color additive haematococcus algae meal consists of the comminuted and dried cells of the...

  8. 21 CFR 73.185 - Haematococcus algae meal.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 21 Food and Drugs 1 2011-04-01 2011-04-01 false Haematococcus algae meal. 73.185 Section 73.185... COLOR ADDITIVES EXEMPT FROM CERTIFICATION Foods § 73.185 Haematococcus algae meal. (a) Identity. (1) The color additive haematococcus algae meal consists of the comminuted and dried cells of the...

  9. 21 CFR 73.185 - Haematococcus algae meal.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 21 Food and Drugs 1 2012-04-01 2012-04-01 false Haematococcus algae meal. 73.185 Section 73.185... COLOR ADDITIVES EXEMPT FROM CERTIFICATION Foods § 73.185 Haematococcus algae meal. (a) Identity. (1) The color additive haematococcus algae meal consists of the comminuted and dried cells of the...

  10. How to Identify and Control Water Weeds and Algae.

    ERIC Educational Resources Information Center

    Applied Biochemists, Inc., Mequon, WI.

    Included in this guide to water management are general descriptions of algae, toxic algae, weed problems in lakes, ponds, and canals, and general discussions of mechanical, biological and chemical control methods. In addition, pictures, descriptions, and recommended control methods are given for algae, 6 types of floating weeds, 18 types of…

  11. 21 CFR 73.275 - Dried algae meal.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... algae meal is a dried mixture of algae cells (genus Spongiococcum, separated from its culture broth), molasses, cornsteep liquor, and a maximum of 0.3 percent ethoxyquin. The algae cells are produced by... the tolerance limitation for ethoxyquin in animal feed prescribed in § 573.380 of this chapter. (c...

  12. 21 CFR 73.275 - Dried algae meal.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... algae meal is a dried mixture of algae cells (genus Spongiococcum, separated from its culture broth), molasses, cornsteep liquor, and a maximum of 0.3 percent ethoxyquin. The algae cells are produced by... the tolerance limitation for ethoxyquin in animal feed prescribed in § 573.380 of this chapter. (c...

  13. 21 CFR 73.275 - Dried algae meal.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... algae meal is a dried mixture of algae cells (genus Spongiococcum, separated from its culture broth), molasses, cornsteep liquor, and a maximum of 0.3 percent ethoxyquin. The algae cells are produced by... the tolerance limitation for ethoxyquin in animal feed prescribed in § 573.380 of this chapter. (c...

  14. 21 CFR 73.275 - Dried algae meal.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... algae meal is a dried mixture of algae cells (genus Spongiococcum, separated from its culture broth), molasses, cornsteep liquor, and a maximum of 0.3 percent ethoxyquin. The algae cells are produced by... the tolerance limitation for ethoxyquin in animal feed prescribed in § 573.380 of this chapter. (c...

  15. Research and development for algae-based technologies in Korea: a review of algae biofuel production.

    PubMed

    Hong, Ji Won; Jo, Seung-Woo; Yoon, Ho-Sung

    2015-03-01

    This review covers recent research and development (R&D) activities in the field of algae-based biofuels in Korea. As South Korea's energy policy paradigm has focused on the development of green energies, the government has funded several algae biofuel R&D consortia and pilot projects. Three major programs have been launched since 2009, and significant efforts are now being made to ensure a sustainable supply of algae-based biofuels. If these R&D projects are executed as planned for the next 10 years, they will enable us to overcome many technical barriers in algae biofuel technologies and help Korea to become one of the leading countries in green energy by 2020.

  16. Spirulina: The Alga That Can End Malnutrition.

    ERIC Educational Resources Information Center

    Fox, Ripley D.

    1985-01-01

    One approach to eliminating malnutrition worldwide is to grow spirulina in recycled village wastes. Spirulina is a blue-green alga and a natural concentrated food. Spirulina can give poor villages a nutritional food supplement they can grow themselves and can reduce infectious disease at the same time. (Author/RM)

  17. Selenium accumulation and metabolism in algae.

    PubMed

    Schiavon, Michela; Ertani, Andrea; Parrasia, Sofia; Vecchia, Francesca Dalla

    2017-08-01

    Selenium (Se) is an intriguing element because it is metabolically required by a variety of organisms, but it may induce toxicity at high doses. Algae primarily absorb selenium in the form of selenate or selenite using mechanisms similar to those reported in plants. However, while Se is needed by several species of microalgae, the essentiality of this element for plants has not been established yet. The study of Se uptake and accumulation strategies in micro- and macro-algae is of pivotal importance, as they represent potential vectors for Se movement in aquatic environments and Se at high levels may affect their growth causing a reduction in primary production. Some microalgae exhibit the capacity of efficiently converting Se to less harmful volatile compounds as a strategy to cope with Se toxicity. Therefore, they play a crucial role in Se-cycling through the ecosystem. On the other side, micro- or macro-algae enriched in Se may be used in Se biofortification programs aimed to improve Se content in human diet via supplementation of valuable food. Indeed, some organic forms of selenium (selenomethionine and methylselenocysteine) are known to act as anticarcinogenic compounds and exert a broad spectrum of beneficial effects in humans and other mammals. Here, we want to give an overview of the developments in the current understanding of Se uptake, accumulation and metabolism in algae, discussing potential ecotoxicological implications and nutritional aspects. Copyright © 2017 Elsevier B.V. All rights reserved.

  18. Research for Developing Renewable Biofuels from Algae

    SciTech Connect

    Black, Paul N.

    2012-12-15

    Task A. Expansion of knowledge related to lipid production and secretion in algae A.1 Lipid biosynthesis in target algal species; Systems biology approaches are being used in combination with recent advances in Chlorella and Chlamydomonas genomics to address lipid accumulation in response to defined nutrient regimes. The UNL Algal Group continues screening additional species of Chlorella and other naturally occurring algae for those with optimal triglyceride production; Of the strains examined by the DOE's Aquatic Species Program, green algae, several species of Chlorella represent the largest group from which oleaginous candidates have been identified; A.1.1. Lipid profiling; Neutral lipid accumulation is routinely monitored by Nile red and BODIPY staining using high throughput strategies to screen for naturally occurring algae that accumulate triglyceride. These strategies complement those using spectrofluorometry to quantify lipid accumulation; Neutral lipid accumulation is routinely monitored by high performance thin-layer chromatography (HPTLC) and high performance liquid chromatography (HPLC) of lipid extracts in conjunction with; Carbon portioning experiments have been completed and the data currently are being analyzed and prepared for publication; Methods in the Black lab were developed to identify and quantify triacylglycerol (TAG), major membrane lipids [diacylglycerol trimethylhomoserine, phosphatidylethanolamine and chloroplast glycolipids], biosynthetic intermediates such as diacylglycerol, phosphatidic acid and lysophospholipids and different species of acyl-coenzyme A (acyl CoA).

  19. [Allelopathic effect of artemisinin on green algae].

    PubMed

    Wu, Ye-Kuan; Yuan, Ling; Huang, Jian-Guo; Li, Long-Yun

    2013-05-01

    To study the growth effects of differing concentrations of artemisinin on green algae and to evaluate the ecological risk. The effects of artemisinin on the growth and the content change of chlorophyll, protein, oxygen, conductivity, SOD, CAT, MDA in Chlorella pyrenoidosa and Scenedesmus oblique were studied through 96 h toxicity tests. Artemisinin accelerated the growth of algae at a lower concentration ( <40 microg . L-1) with content increase of chlorophyll or protein and so on, and it inhibited the growth of algae at higher concentration ( >80 microg . L-1). The content of chlorophyll or protein in algae cells reduced with the increasing concentration of artemisinin, exhibiting the good concentration-effect relationship. SOD and CAT activity was stimulated at low concentrations ( <40 microg . L-1 ) and inhibited at high concentrations ( >80 microg . L- 1). However, MDA content increased significantly with the increase of concentration. According to the seven kinds of indicators changes, the time-response and dose-response suggested that the surfactant first hurt in Ch. pyrenoidosa was damaging membrane by changing membrane lipid molecules soluble. And primary mechanism on Chlorophyta cells might be related to the oxidation damage of lipid and other biological large molecules caused by artemisinin. The large-scale intensive planting of Artemisia annua may reduce the surrounding water productivity.

  20. Laser-fluorescence measurement of marine algae

    NASA Technical Reports Server (NTRS)

    Browell, E. V.

    1980-01-01

    Progress in remote sensing of algae by laser-induced fluorescence is subject of comprehensive report. Existing single-wavelength and four-wavelength systems are reviewed, and new expression for power received by airborne sensor is derived. Result differs by as much as factor of 10 from those previously reported. Detailed error analysis evluates factors affecting accuracy of laser-fluorosensor systems.

  1. Fucoidans — sulfated polysaccharides of brown algae

    NASA Astrophysics Data System (ADS)

    Usov, Anatolii I.; Bilan, M. I.

    2009-08-01

    The methods of isolation of fucoidans and determination of their chemical structures are reviewed. The fucoidans represent sulfated polysaccharides of brown algae, the composition of which varies from simple fucan sulfates to complex heteropolysaccharides. The currently known structures of such biopolymers are presented. A variety of the biological activities of fucoidans is briefly summarised.

  2. Pheromone signaling during sexual reproduction in algae.

    PubMed

    Frenkel, Johannes; Vyverman, Wim; Pohnert, Georg

    2014-08-01

    Algae are found in all aquatic and many terrestrial habitats. They are dominant in phytoplankton and biofilms thereby contributing massively to global primary production. Since algae comprise photosynthetic representatives of the various protoctist groups their physiology and appearance is highly diverse. This diversity is also mirrored in their characteristic life cycles that exhibit various facets of ploidy and duration of the asexual phase as well as gamete morphology. Nevertheless, sexual reproduction in unicellular and colonial algae usually has as common motive that two specialized, sexually compatible haploid gametes establish physical contact and fuse. To guarantee mating success, processes during sexual reproduction are highly synchronized and regulated. This review focuses on sex pheromones of algae that play a key role in these processes. Especially, the diversity of sexual strategies as well as of the compounds involved are the focus of this contribution. Discoveries connected to algal pheromone chemistry shed light on the role of key evolutionary processes, including endosymbiotic events and lateral gene transfer, speciation and adaptation at all phylogenetic levels. But progress in this field might also in the future provide valid tools for the manipulation of aquaculture and environmental processes.

  3. Bromophenols in Marine Algae and Their Bioactivities

    PubMed Central

    Liu, Ming; Hansen, Poul Erik; Lin, Xiukun

    2011-01-01

    Marine algae contain various bromophenols that have been shown to possess a variety of biological activities, including antioxidant, antimicrobial, anticancer, anti-diabetic, and anti-thrombotic effects. Here, we briefly review the recent progress of these marine algal biomaterials, with respect to structure, bioactivities, and their potential application as pharmaceuticals. PMID:21822416

  4. Sterol chemotaxonomy of marine pelagophyte algae.

    PubMed

    Giner, José-Luis; Zhao, Hui; Boyer, Gregory L; Satchwell, Michael F; Andersen, Robert A

    2009-07-01

    Several marine algae of the class Pelagophyceae produce the unusual marine sterol 24-propylidenecholesterol, mainly as the (24E)-isomer. The (24Z)-isomer had previously been considered as a specific biomarker for Aureococcus anophagefferens, the 'brown tide' alga of the Northeast coast of the USA. To test this hypothesis and to generate chemotaxonomic information, the sterol compositions of 42 strains of pelagophyte algae including 17 strains of Aureococcus anophagefferens were determined by GC analysis. A more comprehensive sterol analysis by HPLC and (1)H-NMR was obtained for 17 selected pelagophyte strains. All strains analyzed contained 24-propylidenecholesterol. In all strains belonging to the order Sarcinochrysidales, this sterol was found only as the (E)-isomer, while all strains in the order Pelagomonadales contained the (Z)-isomer, either alone or together with the (E)-isomer. The occurrence of Delta(22) and 24alpha-sterols was limited to the Sarcinochrysidales. The first occurrence of Delta(22)-24-propylcholesterol in an alga, CCMP 1410, was reported. Traces of the rare sterol 26,26-dimethyl-24-methylenecholesterol were detected in Aureococcus anophagefferens, and the (25R)-configuration was proposed, based on biosynthetic considerations. Traces of a novel sterol, 24-propylidenecholesta-5,25-dien-3beta-ol, were detected in several species.

  5. Spirulina: The Alga That Can End Malnutrition.

    ERIC Educational Resources Information Center

    Fox, Ripley D.

    1985-01-01

    One approach to eliminating malnutrition worldwide is to grow spirulina in recycled village wastes. Spirulina is a blue-green alga and a natural concentrated food. Spirulina can give poor villages a nutritional food supplement they can grow themselves and can reduce infectious disease at the same time. (Author/RM)

  6. Dermatitis from purified sea algae toxin (debromoaplysiatoxin).

    PubMed

    Solomon, A E; Stoughton, R B

    1978-09-01

    Cutaneous inflammation was induced by debromoaplysiatoxin, a purified toxin extracted from Lyngbya majuscula Gomont. This alga causes a seaweed dermatitis that occurs in persons who have swum off the coast of Oahu in Hawaii. By topical application, the toxin was found to produce an irritant pustular folliculitis in humans and to cause a severe cutaneous inflammatory reaction in the rabbit and in hairless mice.

  7. Polyamine biosynthetic diversity in plants and algae.

    PubMed

    Fuell, Christine; Elliott, Katherine A; Hanfrey, Colin C; Franceschetti, Marina; Michael, Anthony J

    2010-07-01

    Polyamine biosynthesis in plants differs from other eukaryotes because of the contribution of genes from the cyanobacterial ancestor of the chloroplast. Plants possess an additional biosynthetic route for putrescine formation from arginine, consisting of the enzymes arginine decarboxylase, agmatine iminohydrolase and N-carbamoylputrescine amidohydrolase, derived from the cyanobacterial ancestor. They also synthesize an unusual tetraamine, thermospermine, that has important developmental roles and which is evolutionarily more ancient than spermine in plants and algae. Single-celled green algae have lost the arginine route and are dependent, like other eukaryotes, on putrescine biosynthesis from the ornithine. Some plants like Arabidopsis thaliana and the moss Physcomitrella patens have lost ornithine decarboxylase and are thus dependent on the arginine route. With its dependence on the arginine route, and the pivotal role of thermospermine in growth and development, Arabidopsis represents the most specifically plant mode of polyamine biosynthesis amongst eukaryotes. A number of plants and algae are also able to synthesize unusual polyamines such as norspermidine, norspermine and longer polyamines, and biosynthesis of these amines likely depends on novel aminopropyltransferases similar to thermospermine synthase, with relaxed substrate specificity. Plants have a rich repertoire of polyamine-based secondary metabolites, including alkaloids and hydroxycinnamic amides, and a number of polyamine-acylating enzymes have been recently characterised. With the genetic tools available for Arabidopsis and other model plants and algae, and the increasing capabilities of comparative genomics, the biological roles of polyamines can now be addressed across the plant evolutionary lineage.

  8. Washington State University Algae Biofuels Research

    SciTech Connect

    chen, Shulin; McCormick, Margaret; Sutterlin, Rusty

    2012-12-29

    The goal of this project was to advance algal technologies for the production of biofuels and biochemicals by establishing the Washington State Algae Alliance, a collaboration partnership among two private companies (Targeted Growth, Inc. (TGI), Inventure Chemicals (Inventure) Inc (now Inventure Renewables Inc) and Washington State University (WSU). This project included three major components. The first one was strain development at TGI by genetically engineering cyanobacteria to yield high levels of lipid and other specialty chemicals. The second component was developing an algal culture system at WSU to produce algal biomass as biofuel feedstock year-round in the northern states of the United States. This system included two cultivation modes, the first one was a phototrophic process and the second a heterotrophic process. The phototrophic process would be used for algae production in open ponds during warm seasons; the heterotrophic process would be used in cold seasons so that year-round production of algal lipid would be possible. In warm seasons the heterotrophic process would also produce algal seeds to be used in the phototrophic culture process. Selected strains of green algae and cyanobacteria developed by TGI were tested in the system. The third component was downstream algal biomass processing by Inventure that included efficiently harvesting the usable fuel fractions from the algae mass and effectively isolating and separating the usable components into specific fractions, and converting isolated fractions into green chemicals.

  9. 21 CFR 184.1121 - Red algae.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 21 Food and Drugs 3 2014-04-01 2014-04-01 false Red algae. 184.1121 Section 184.1121 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) DIRECT FOOD... coastal waters. The material is dried and ground or chopped for use in food. (b) The ingredient meets the...

  10. 21 CFR 184.1120 - Brown algae.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 21 Food and Drugs 3 2014-04-01 2014-04-01 false Brown algae. 184.1120 Section 184.1120 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) DIRECT FOOD... chopped for use in food. (b) The ingredient meets the specifications for kelp in the Food Chemicals Codex...

  11. The energy production of juvenile Arenicola marina (Polychaeta) under anoxic and hypoxic conditions

    NASA Astrophysics Data System (ADS)

    Schiedek, Doris; Schöttler, Udo

    1990-06-01

    The mode of anaerobic energy production of juvenile Arenicola marina (0-generation) was investigated under experimental conditions and in the biotope. Under experimental anaerobic conditions, juvenile A. marina produce energy by the pathways known from the adults and other euryoxic invertebrates with succinate and the volatile fatty acids, acetate and propionate, as main end products. However, the juvenile lugworms are less resistent to anoxia than the adults. The reasons for this might be their small glycogen stores and their limited ability to reduce the metabolic rate. Nevertheless, on the tidal flats the juveniles settle particularly in the area next to the high tide line, which offers such extreme conditions that adult lugworms cannot live there. This different behaviour can be explained by the dissimilar ability to use oxygen at very low partial pressures. Juveniles maintain an aerobic energy metabolism even at a PWO 2 of 15 Torr at which adults are forced to produce energy exclusively by the less effective anaerobic mode. In the field, no indications of an anaerobic energy metabolism were detected in juveniles even after an exposure of 8 hours.

  12. Light- and Electron-microscopical Study of Belonocystis marina sp. nov. (Eukaryota: incertae sedis).

    PubMed

    Klimov, Vladimir I; Zlatogursky, Vasily V

    2016-11-01

    BelonocystisRainer, 1968 is an enigmatic protist genus, which currently lacks any supergroup affiliation. The spherical cells of this organism move on the substratum using fine non-branching pseudopodia. The cell surface is surrounded with a spiky covering. Belonocystis marina sp. nov. was studied using light- and electron microscopy. It was clearly shown that the surface structures of Belonocystis were scales, not a capsule. The new species could be distinguished by the morphology of the scales, which had a bulbous base with three "skirts" (circular latticed structures) and a spike consisting of many twisted fibrils. Each scale was associated with a short cytoplasmic outgrowth. The organic nature of these scales was confirmed by energy-dispersive X-ray microanalysis. Large multinucleated stages were discovered in the life-cycle of this organism. A survey of the cell ultrastructure revealed all the common eukaryotic organelles, including mitochondria with tubular cristae. No microtubules were detected in ultrathin sections of pseudopodia. Examination of food vacuole contents confirmed that this organism was bacterivorous. The finding of Belonocystis marina is the first record of the genus in a marine habitat. Many similarities in the scale structure and fine structure of the cell between Belonocystis and Luffisphaera were discussed. Copyright © 2016 Elsevier GmbH. All rights reserved.

  13. NADP(+)-dependent isocitrate dehydrogenase from a psychrophilic bacterium, Psychromonas marina.

    PubMed

    Hirota, Ryo; Tsubouchi, Kango; Takada, Yasuhiro

    2017-07-01

    The gene encoding NADP(+)-dependent isocitrate dehydrogenase (IDH; EC 1.1.1.42) of a psychrophilic bacterium, Psychromonas marina, was cloned and sequenced. The open reading frame of the gene encoding IDH of P. marina (PmIDH) was 2229 bp in length and corresponded to a polypeptide composed of 742 amino acids. The molecular mass of IDH was calculated as 80,426 Da. The deduced amino acid sequence of PmIDH exhibited high degrees of homology with the monomeric IDH from other bacteria such as Colwellia maris (62% identity) and Azotobacter vinelandii (AvIDH) (64%). His-tagged PmIDH overexpressed in Escherichia coli cells was purified and characterized. The optimum temperature of PmIDH activity was about 35 °C; however, the enzyme lost 74% of the activity after incubation for 10 min at 30 °C, indicating that this enzyme is thermolabile. Chimeric enzymes produced through domain swapping between PmIDH and mesophilic AvIDH were constructed and their optimum temperatures and thermostability were determined. The results suggest that regions 2 and 3, especially region 3, of the two IDHs are involved in their catalytic activities and optimum temperature and thermostability for activity.

  14. Transcriptomic resilience to global warming in the seagrass Zostera marina, a marine foundation species.

    PubMed

    Franssen, Susanne U; Gu, Jenny; Bergmann, Nina; Winters, Gidon; Klostermeier, Ulrich C; Rosenstiel, Philip; Bornberg-Bauer, Erich; Reusch, Thorsten B H

    2011-11-29

    Large-scale transcription profiling via direct cDNA sequencing provides important insights as to how foundation species cope with increasing climatic extremes predicted under global warming. Species distributed along a thermal cline, such as the ecologically important seagrass Zostera marina, provide an opportunity to assess temperature effects on gene expression as a function of their long-term adaptation to heat stress. We exposed a southern and northern European population of Zostera marina from contrasting thermal environments to a realistic heat wave in a common-stress garden. In a fully crossed experiment, eight cDNA libraries, each comprising ~125 000 reads, were obtained during and after a simulated heat wave, along with nonstressed control treatments. Although gene-expression patterns during stress were similar in both populations and were dominated by classical heat-shock proteins, transcription profiles diverged after the heat wave. Gene-expression patterns in southern genotypes returned to control values immediately, but genotypes from the northern site failed to recover and revealed the induction of genes involved in protein degradation, indicating failed metabolic compensation to high sea-surface temperature. We conclude that the return of gene-expression patterns during recovery provides critical information on thermal adaptation in aquatic habitats under climatic stress. As a unifying concept for ecological genomics, we propose transcriptomic resilience, analogous to ecological resilience, as an important measure to predict the tolerance of individuals and hence the fate of local populations in the face of global warming.

  15. Photoacclimatory Responses of Zostera marina in the Intertidal and Subtidal Zones.

    PubMed

    Park, Sang Rul; Kim, Sangil; Kim, Young Kyun; Kang, Chang-Keun; Lee, Kun-Seop

    2016-01-01

    Photoacclimatory responses of the seagrass Zostera marina in the intertidal and subtidal zones were investigated by measuring chlorophyll a fluorescence parameters, photosynthetic pigments, leaf δ13C values, and shoot morphology in two bay systems. Intertidal plants had higher carotenoid concentrations than subtidal plants to avoid photodamage under excess light conditions during the day. The maximum relative electron transport rate (rETRmax) and minimum saturation irradiance (Ek) of the intertidal plants were higher than those of the subtidal plants, whereas photosynthetic efficiency (α) and maximum quantum yield (Fv/Fm) were higher in subtidal plants. The intertidal plants also had significantly greater Stern-Volmer non-photochemical quenching (NPQ) than that of the subtidal plants. These results suggest that the subtidal plants photoacclimated to use limited light more efficiently, and the intertidal plants exhibited photosynthetic responses to minimize photodamage at excess irradiance. The δ13C values of leaf tissues were more negative in the intertidal plants than those in the subtidal plants, suggesting that the intertidal plants used atmospheric or dissolved CO2 for photosynthesis during emersion. Effective quantum yield (ΔF/Fm´) in the intertidal plants decreased more slowly after emersion than that in the subtidal plants, indicating higher desiccation tolerance of the intertidal plants. The intertidal plants also recovered more rapidly from desiccation damage than the subtidal plants, suggesting photosynthetic adaptation to desiccation stress. The photosynthetic plasticity of Z. marina in response to variable environmental conditions most likely allows this species to occur in the intertidal and subtidal zones.

  16. Genome sequence of the ocean sediment bacterium Saccharomonospora marina type strain (XMU15T)

    SciTech Connect

    Klenk, Hans-Peter; Lu, Megan; Lucas, Susan; Copeland, A; Pitluck, Sam; Goodwin, Lynne A.; Han, Cliff; Tapia, Roxanne; Brambilla, Evelyne-Marie; Potter, Gabriele; Land, Miriam L; Ivanova, N; Rohde, Manfred; Goker, Markus; Detter, J. Chris; Li, Wen-Jun; Kyrpides, Nikos C; Woyke, Tanja

    2012-01-01

    Saccharomonospora marina Liu et al. 2010 is a member to the genomically so far poorly characterized genus Saccharomonospora in the family Pseudonocardiaceae. Members of the genus Sacharomonospora are of interest because they originate from diverse habitats, such as leaf litter, manure, compost, surface of peat, moist, over-heated grain, and ocean sediment, where they might play a role in the primary degradation of plant material by attacking hemicellulose. Organisms belonging to the genus are usually Gram-positive staining, non-acid fast, and classify among the actinomycetes. Next to S. viridis and S. azurea, S. marina is the third member in the genus Saccharomonospora for with a completely sequenced (permanent draft status) type strain genome will be published. Here we describe the features of this organism, together with the complete genome sequence, and annotation. The 5,965,593 bp long chromosome with its 5,727 protein-coding and 57 RNA genes was sequenced as part of the DOE funded Community Sequencing Program (CSP) 2010 at the Joint Genome Institute (JGI).

  17. Phenology and Growth dynamics of Avicennia marina in the Central Red Sea

    PubMed Central

    Almahasheer, Hanan; Duarte, Carlos M.; Irigoien, Xabier

    2016-01-01

    The formation of nodes, stem elongation and the phenology of stunted Avicennia marina was examined in the Central Red Sea, where Avicennia marina is at the limit of its distribution range and submitted to extremely arid conditions with salinity above 38 psu and water temperature as high as 35° C. The annual node production was rather uniform among locations averaging 9.59 node y−1, which resulted in a plastocron interval, the interval in between production of two consecutive nodes along a stem, of 38 days. However, the internodal length varied significantly between locations, resulting in growth differences possibly reflecting the environmental conditions of locations. The reproductive cycle lasted for approximately 12 months, and was characterized by peak flowering and propagule development in November and January. These phenological observations provide a starting point for research and restoration programs on the ecology of mangroves in the Central Red Sea, while the plastochrone index reported here would allow calculations of the growth and production of the species from simple morphological measurements. PMID:27892956

  18. Sediment-quality assessment using the polychaete Arenicola marina: contamination, bioavailability, and toxicity.

    PubMed

    Ramos-Gómez, Julia; Viguri, Javier R; Luque, Angel; Vale, Carlos; Martín-Díaz, M Laura; DelValls, T Angel

    2011-11-01

    The sediment quality of Cádiz Bay, Las Palmas de Gran Canaria (LPGC) Port, Santander Bay, Algeciras Bay, and Huelva Estuary (Spain) was evaluated by analysing a battery of biochemical biomarkers-activities of biotranformation enzymes ethoxyresorufin O-deethylase [EROD], dibenzylflourescein dealkylase [DBF], and glutathione S-transferase [GST]; activity of antioxidant enzyme glutathione reductase [GR]; and lipid peroxidation [LPO]-in the polychaete Arenicola marina after laboratory sediment exposure. Huelva Estuary polychaetes showed significantly (p < 0.05) enhanced LPO, GST, and EROD activities compared with control lugworms related to metals and presumably polychlorinated biphenyls. EROD activity significant (p < 0.05) induction was associated polycyclic aromatic hydrocarbons after Santander Bay sediment exposure. Nickel appeared to significantly (p < 0.05) induce GR activity and LPO in LPGC Port sediment-exposed organisms. DBF activity significantly (p < 0.05) increased in polychaetes exposed to sediments from sewage-contaminated areas. A. marina was sensitive at the biochemical level. Integration of sediment characterization and biomarker results allowed the identification of polluted sites as well as the cause of possible sediment toxicity.

  19. The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea.

    PubMed

    Olsen, Jeanine L; Rouzé, Pierre; Verhelst, Bram; Lin, Yao-Cheng; Bayer, Till; Collen, Jonas; Dattolo, Emanuela; De Paoli, Emanuele; Dittami, Simon; Maumus, Florian; Michel, Gurvan; Kersting, Anna; Lauritano, Chiara; Lohaus, Rolf; Töpel, Mats; Tonon, Thierry; Vanneste, Kevin; Amirebrahimi, Mojgan; Brakel, Janina; Boström, Christoffer; Chovatia, Mansi; Grimwood, Jane; Jenkins, Jerry W; Jueterbock, Alexander; Mraz, Amy; Stam, Wytze T; Tice, Hope; Bornberg-Bauer, Erich; Green, Pamela J; Pearson, Gareth A; Procaccini, Gabriele; Duarte, Carlos M; Schmutz, Jeremy; Reusch, Thorsten B H; Van de Peer, Yves

    2016-02-18

    Seagrasses colonized the sea on at least three independent occasions to form the basis of one of the most productive and widespread coastal ecosystems on the planet. Here we report the genome of Zostera marina (L.), the first, to our knowledge, marine angiosperm to be fully sequenced. This reveals unique insights into the genomic losses and gains involved in achieving the structural and physiological adaptations required for its marine lifestyle, arguably the most severe habitat shift ever accomplished by flowering plants. Key angiosperm innovations that were lost include the entire repertoire of stomatal genes, genes involved in the synthesis of terpenoids and ethylene signalling, and genes for ultraviolet protection and phytochromes for far-red sensing. Seagrasses have also regained functions enabling them to adjust to full salinity. Their cell walls contain all of the polysaccharides typical of land plants, but also contain polyanionic, low-methylated pectins and sulfated galactans, a feature shared with the cell walls of all macroalgae and that is important for ion homoeostasis, nutrient uptake and O2/CO2 exchange through leaf epidermal cells. The Z. marina genome resource will markedly advance a wide range of functional ecological studies from adaptation of marine ecosystems under climate warming, to unravelling the mechanisms of osmoregulation under high salinities that may further inform our understanding of the evolution of salt tolerance in crop plants.

  20. Adenosine deaminase production by an endophytic bacterium (Lysinibacillus sp.) from Avicennia marina.

    PubMed

    Kathiresan, Kandasamy; Saravanakumar, Kandasamy; Sahu, Sunil Kumar; Sivasankaran, Muthu

    2014-06-01

    The present study was carried out with the following objectives: (1) to isolate the endophytic bacilli strains from the leaves of mangrove plant Avicennia marina, (2) to screen the potential strains for the production of adenosine deaminase, (3) to statistically optimize the factors that influence the enzyme activity in the potent strain, and (4) to identify the potent strain using 16S rRNA sequence and construct its phylogenetic tree. The bacterial strains isolated from the fresh leaves of a mangrove A. marina were assessed for adenosine deaminase activity by plating method. Optimization of reaction process was carried out using response surface methodology of central composite design. The potent strain was identified based on 16S rRNA sequencing and phylogeny. Of five endophytic strains, EMLK1 showed a significant deaminase activity over other four strains. The conditions for maximum activity of the isolated adenosine deaminase are described. The potent strain EMLK1 was identified as Lysinibacillus sp. (JQ710723) being the first report as a mangrove endophyte. Mangrove-derived endophytic bacillus strain Lysinibacillus sp. EMLK1 is proved to be a promising source for the production of adenosine deaminase and this enzyme deserves further studies for purification and its application in disease diagnosis.

  1. Biosynthesis of silver nanoparticles from mangrove plant (Avicennia marina) extract and their potential mosquito larvicidal property.

    PubMed

    Balakrishnan, Srinivasan; Srinivasan, Muthukumarasamy; Mohanraj, Jeyaraj

    2016-09-01

    To identify the larvicidal activities of silver nanoparticles synthesised with Avicennia marina leaf extract against the larvae of Aedes aegypti and Anopheleus stephensi, in vitro larvicidal activities such as LC50 and LC90 were assessed. Further, characterisation such as UV and FTIR analysis were carried out for the synthesised silver nanoparticles. The LC50 value of the synthesised silver nanoparticles was identified as 4.374 and 7.406 mg/L for An. stephensi and Ae. aegypti larvae respectively. Further, the LC90 values are also identified as 4.928 and 9.865 mg/L for An. stephensi and Ae. aegypti species respectively. The synthesised silver nanoparticles have maximum absorption at 420 nm with the average size of 60-95 nm. The FTIR data showed prominent peaks in (3940.57, 3929.00, 3803.63, 3712.97, 2918.30, 2231.64, 1610.50, 1377.17, 1257.59, 1041.59, 1041.56, 775.38, 667.37 and 503.21) different ranges. The biosynthesis of silver nanoparticles with leaf aqueous extract of A. marina provides potential source for the larvicidal activity against mosquito borne diseases. The present study proved the mosquitocidal properties of silver nanoparticles synthesised from mangroves of Vellar estuary. This is an ideal eco-friendly approach for the vector control programs.

  2. Rhinella marina (Amphibia: Bufonidae) Versus Rhabdias paraensis (Nematoda: Rhabdiasidae): Expanding the View on a Natural Infection.

    PubMed

    Santos, Jeannie Nascimento Dos; da Silva, Djane Clarys Baia; Feitosa, Lucas Aristóteles das Neves; Furtado, Adriano Penha; Giese, Elane Guerreiro; de Vasconcelos Melo, Francisco Tiago

    2016-06-01

    Amphibian and reptile lungs are frequently infected with Rhabdias parasites, and this condition ultimately leads to reduced survival, performance, and growth because of granulomatous inflammation, nodule formation, and nematodal pneumonia onset. Here we investigate the histopathological features of naturally infected Rhinella marina by the lung nematode Rhabdias paraensis. A total of 10 host animals were captured in peridomiciliar areas in the eastern Brazilian Amazon, and anatomic-histological analyses were performed on both the infected and non-infected lungs of these amphibians. Helminths were usually found within the secondary and primary septa of infected lungs whereas parasites were not detected within vessels or adhering to tissues. In addition, we observed discrete erythrocytes, diapedesis foci, few granulocytes and erythrocytes in the interseptal spaces, discrete cell infiltration, and a small number of melanomacrophages, and no granulomas or cysts were observed. New aspects related to changes in tissue and helminth-host interactions are discussed for the relationship of R. paraensis × Rhi. marina from the Amazon region.

  3. Phenology and Growth dynamics of Avicennia marina in the Central Red Sea.

    PubMed

    Almahasheer, Hanan; Duarte, Carlos M; Irigoien, Xabier

    2016-11-28

    The formation of nodes, stem elongation and the phenology of stunted Avicennia marina was examined in the Central Red Sea, where Avicennia marina is at the limit of its distribution range and submitted to extremely arid conditions with salinity above 38 psu and water temperature as high as 35° C. The annual node production was rather uniform among locations averaging 9.59 node y(-1), which resulted in a plastocron interval, the interval in between production of two consecutive nodes along a stem, of 38 days. However, the internodal length varied significantly between locations, resulting in growth differences possibly reflecting the environmental conditions of locations. The reproductive cycle lasted for approximately 12 months, and was characterized by peak flowering and propagule development in November and January. These phenological observations provide a starting point for research and restoration programs on the ecology of mangroves in the Central Red Sea, while the plastochrone index reported here would allow calculations of the growth and production of the species from simple morphological measurements.

  4. Inhibitory Activity of Avicennia marina, a Medicinal Plant in Persian Folk Medicine, against HIV and HSV.

    PubMed

    Namazi, Rahele; Zabihollahi, Rezvan; Behbahani, Mandana; Rezaei, Abbas

    2013-01-01

    Avicennia marina (Avicenniaceae) is a species of mangrove tree used for treatment of small pox lesions in Persian folk medicine. The antiviral activity of methanol, ethanol, water, chloroform and n-hexane extracts was evaluated against HIV-1 and HSV. Methanol extract had the highest antiviral activity and the most polar fraction of this extract (fraction D) inhibited HSV with TI and SI values of 57.1 and 133; however, it showed mild activity against HIV with SI value of 6.25 (fraction 3). The anti-HSV activity of active fraction was confirmed using FLASH-PCR. Phytochemical investigation revealed that fraction D encompasses flavonoids compounds. The time-of-addition study demonstrated that fraction D disturbs viral replication after penetrating to the cell. A. marina was endowed with fragments by which found to be able to inhibit replication of HSV after entry but did not show significant potency against HIV-1. This promotes further investigation in anti-HSV drug discovery.

  5. A biliverdin-binding cyanobacteriochrome from the chlorophyll d–bearing cyanobacterium Acaryochloris marina

    PubMed Central

    Narikawa, Rei; Nakajima, Takahiro; Aono, Yuki; Fushimi, Keiji; Enomoto, Gen; Ni-Ni-Win; Itoh, Shigeru; Sato, Moritoshi; Ikeuchi, Masahiko

    2015-01-01

    Cyanobacteriochromes (CBCRs) are linear tetrapyrrole-binding photoreceptors in cyanobacteria that absorb visible and near-ultraviolet light. CBCRs are divided into two types based on the type of chromophore they contain: phycocyanobilin (PCB) or phycoviolobilin (PVB). PCB-binding CBCRs reversibly photoconvert at relatively long wavelengths, i.e., the blue-to-red region, whereas PVB-binding CBCRs reversibly photoconvert at shorter wavelengths, i.e., the near-ultraviolet to green region. Notably, prior to this report, CBCRs containing biliverdin (BV), which absorbs at longer wavelengths than do PCB and PVB, have not been found. Herein, we report that the typical red/green CBCR AM1_1557 from the chlorophyll d–bearing cyanobacterium Acaryochloris marina can bind BV almost comparable to PCB. This BV-bound holoprotein reversibly photoconverts between a far red light–absorbing form (Pfr, λmax = 697 nm) and an orange light–absorbing form (Po, λmax = 622 nm). At room temperature, Pfr fluoresces with a maximum at 730 nm. These spectral features are red-shifted by 48~77 nm compared with those of the PCB-bound domain. Because the absorbance of chlorophyll d is red-shifted compared with that of chlorophyll a, the BV-bound AM1_1557 may be a physiologically relevant feature of A. marina and is potentially useful as an optogenetic switch and/or fluorescence imager. PMID:25609645

  6. Impact of tail-nipping on mortality, growth and reproduction of Arenicola marina

    NASA Astrophysics Data System (ADS)

    Bergman, Magda J. N.; Van Der Veer, Henk W.; Karczmarski, Leszek

    The impact of predation by amputation of regenerating body parts (tail tips) of the lugworm Arenicola marina on species mortality, growth and reproduction has been studied under laboratory conditions by the artificial removal of tail tips at different frequencies. The loss of body weight by amputation was not compensated for by an increased growth. Within a wide range of amputation frequencies, total growth (body growth + amount of tail tip amputated) and reproduction of the lugworm were not affected. Also, both egg development and amount of energy stored in reproduction remained the same. Only at the highest frequency of amputation (once a week) did total growth decrease in the course of time, resulting even in a loss of body weight. The amount of energy stored in reproduction was also significantly less at the highest rate of amputation. Lugworms appeared to be unable to sustain this high level of amputation and the anaerobic sediment conditions in the cuvettes suggest a reduced pumping activity and food intake. Mortality in this group was also higher than in the other groups. The consequences of tail-nipping by flatfish for A. marina in the field situation are discussed.

  7. Phenology and Growth dynamics of Avicennia marina in the Central Red Sea

    NASA Astrophysics Data System (ADS)

    Almahasheer, Hanan; Duarte, Carlos M.; Irigoien, Xabier

    2016-11-01

    The formation of nodes, stem elongation and the phenology of stunted Avicennia marina was examined in the Central Red Sea, where Avicennia marina is at the limit of its distribution range and submitted to extremely arid conditions with salinity above 38 psu and water temperature as high as 35° C. The annual node production was rather uniform among locations averaging 9.59 node y‑1, which resulted in a plastocron interval, the interval in between production of two consecutive nodes along a stem, of 38 days. However, the internodal length varied significantly between locations, resulting in growth differences possibly reflecting the environmental conditions of locations. The reproductive cycle lasted for approximately 12 months, and was characterized by peak flowering and propagule development in November and January. These phenological observations provide a starting point for research and restoration programs on the ecology of mangroves in the Central Red Sea, while the plastochrone index reported here would allow calculations of the growth and production of the species from simple morphological measurements.

  8. Microplastics are taken up by mussels (Mytilus edulis) and lugworms (Arenicola marina) living in natural habitats.

    PubMed

    Van Cauwenberghe, Lisbeth; Claessens, Michiel; Vandegehuchte, Michiel B; Janssen, Colin R

    2015-04-01

    We studied the uptake of microplastics under field conditions. At six locations along the French-Belgian-Dutch coastline we collected two species of marine invertebrates representing different feeding strategies: the blue mussel Mytilus edulis (filter feeder) and the lugworm Arenicola marina (deposit feeder). Additional laboratory experiments were performed to assess possible (adverse) effects of ingestion and translocation of microplastics on the energy metabolism (cellular energy allocation) of these species. Microplastics were present in all organisms collected in the field: on average 0.2 ± 0.3 microplastics g(-1) (M. edulis) and 1.2 ± 2.8 particles g(-1) (A. marina). In a proof of principle laboratory experiment, mussels and lugworms exposed to high concentrations of polystyrene microspheres (110 particles mL(-1) seawater and 110 particles g(-1) sediment, respectively) showed no significant adverse effect on the organisms' overall energy budget. The results are discussed in the context of possible risks as a result of the possible transfer of adsorbed contaminants.

  9. Effects of barium and cadmium on the population development of the marine nematode Rhabditis (Pellioditis) marina.

    PubMed

    Lira, V F; Santos, G A P; Derycke, S; Larrazabal, M E L; Fonsêca-Genevois, V G; Moens, T

    2011-10-01

    Offshore oil and gas drilling often involves the use of fluids containing barium and traces of other heavy metals. These may affect the environment, but information on their toxicity to benthic biota remains scant. Here, we present results of a 10-day bioassay with the marine nematode Rhabditis (Pellioditis) marina at different loads of barium (0-10 ,000 ppm nominal concentrations) and cadmium (0-12 ppm) in the range of concentrations reported from drilling-impacted sediments. Barium did not affect the fitness and population development of R. (P.) marina at concentrations up to 300 ppm, but did cause a decrease in population abundance and an increase in development time from concentrations of 400-2000 ppm onwards. Increased mortality occurred at 4800 ppm Ba. For cadmium, LOEC and EC₅₀ values for total population abundance were 2.95 and 8.82 ppm, respectively. Cd concentrations as low as 2.40 to 2.68 caused a decrease in the abundance of adult nematodes, indicating that assays covering more generations would likely demonstrate yet more pronounced population-level effects. Our results indicate that oil and gas drilling activities may potentially have important implications for the meiobenthos through the toxicity of barium and associated metals like cadmium. Copyright © 2011 Elsevier Ltd. All rights reserved.

  10. Understanding the Ecoydrology of Mangroves: A Simple SPAC Model for Avicennia Marina

    NASA Astrophysics Data System (ADS)

    Perri, Saverio; Viola, Francesco; Valerio Noto, Leonardo; Molini, Annalisa

    2015-04-01

    Mangroves represent one of the most carbon-rich ecosystems in the Tropics, noticeably impacting ecosystem services and the economy of these regions. Whether the ability of mangroves to exclude and tolerate salt has been extensively investigated in the literature - both from the structural and functional point of view - their eco-hydrological characteristics remains largely understudied, despite the crucial link with productivity, efficient carbon storage and fluxes. In this contribution we develop a "first-order" Soil Plant Atmosphere Continuum model for Avicennia Marina, a mangrove able to adapt to hyper-arid intertidal zones and characterized by complex morphological and eco-physiological traits. Among mangroves, Avicennia marina is one of the most tolerant to salinity and arid climatic conditions. Our model, based on a simple macroscopic approach, takes into account the specific characteristics of the mangrove ecosystem and in particular, the salinity of the water in the soil and the levels of salt stress to which the plant may be subjected. Mangrove transpiration is hence obtained by solving the plant and leaf water balance and the leaf energy balance, taking explicitly into account the role of osmotic water potential and salinity in governing plant resistance to water fluxes. The SPAC model of Avicennia is hence tested against experimental data obtained from the literature, showing the reliability and effectiveness of this minimalist model in reproducing observed transpiration fluxes. Finally, sensitivity analysis is used to assess whether uncertainty on the adopted parameters could lead to significant errors in the transpiration assessment.

  11. Endotoxin structures in the psychrophiles Psychromonas marina and Psychrobacter cryohalolentis contain distinctive acyl features.

    PubMed

    Sweet, Charles R; Alpuche, Giancarlo M; Landis, Corinne A; Sandman, Benjamin C

    2014-07-09

    Lipid A is the essential component of endotoxin (Gram-negative lipopolysaccharide), a potent immunostimulatory compound. As the outer surface of the outer membrane, the details of lipid A structure are crucial not only to bacterial pathogenesis but also to membrane integrity. This work characterizes the structure of lipid A in two psychrophiles, Psychromonas marina and Psychrobacter cryohalolentis, and also two mesophiles to which they are related using MALDI-TOF MS and fatty acid methyl ester (FAME) GC-MS. P. marina lipid A is strikingly similar to that of Escherichia coli in organization and total acyl size, but incorporates an unusual doubly unsaturated tetradecadienoyl acyl residue. P. cryohalolentis also shows structural organization similar to a closely related mesophile, Acinetobacter baumannii, however it has generally shorter acyl constituents and shows many acyl variants differing by single methylene (-CH2-) units, a characteristic it shares with the one previously reported psychrotolerant lipid A structure. This work is the first detailed structural characterization of lipid A from an obligate psychrophile and the second from a psychrotolerant species. It reveals distinctive structural features of psychrophilic lipid A in comparison to that of related mesophiles which suggest constitutive adaptations to maintain outer membrane fluidity in cold environments.

  12. Polystyrene influences bacterial assemblages in Arenicola marina-populated aquatic environments in vitro.

    PubMed

    Kesy, Katharina; Oberbeckmann, Sonja; Müller, Felix; Labrenz, Matthias

    2016-12-01

    Plastic is ubiquitous in global oceans and constitutes a newly available habitat for surface-associated bacterial assemblages. Microplastics (plastic particles <5 mm) are especially susceptible to ingestion by marine organisms, as the size of these particles makes them available also to lower trophic levels. Because many marine invertebrates harbour potential pathogens in their guts, we investigated whether bacterial assemblages on polystyrene are selectively modified during their passage through the gut of the lugworm Arenicola marina and are subsequently able to develop pathogenic biofilms. We also examined whether polystyrene acts as a vector for gut biofilm assemblages after subsequent incubation of the egested particles in seawater. Our results showed that after passage through the digestive tract of A. marina, the bacterial assemblages on polystyrene particles and reference glass beads became more similar, harbouring common sediment bacteria. By contrast, only in the presence of polystyrene the potential symbiont Amphritea atlantica was enriched in the investigated biofilms, faeces, and water. Thus, especially in areas of high polystyrene contamination, this polymer may impact the bacterial composition of different habitats, with as yet unknown consequences for the respective ecosystems.

  13. Effects of microplastic on fitness and PCB bioaccumulation by the lugworm Arenicola marina (L.).

    PubMed

    Besseling, Ellen; Wegner, Anna; Foekema, Edwin M; van den Heuvel-Greve, Martine J; Koelmans, Albert A

    2013-01-02

    It has been speculated that marine microplastics may cause negative effects on benthic marine organisms and increase bioaccumulation of persistent organic pollutants (POPs). Here, we provide the first controlled study of plastic effects on benthic organisms including transfer of POPs. The effects of polystyrene (PS) microplastic on survival, activity, and bodyweight, as well as the transfer of 19 polychlorinated biphenyls (PCBs), were assessed in bioassays with Arenicola marina (L.). PS was pre-equilibrated in natively contaminated sediment. A positive relation was observed between microplastic concentration in the sediment and both uptake of plastic particles and weight loss by A. marina. Furthermore, a reduction in feeding activity was observed at a PS dose of 7.4% dry weight. A low PS dose of 0.074% increased bioaccumulation of PCBs by a factor of 1.1-3.6, an effect that was significant for ΣPCBs and several individual congeners. At higher doses, bioaccumulation decreased compared to the low dose, which however, was only significant for PCB105. PS had statistically significant effects on the organisms' fitness and bioaccumulation, but the magnitude of the effects was not high. This may be different for sites with different plastic concentrations, or plastics with a higher affinity for POPs.

  14. Monitoring of the booster biocide dichlofluanid in water and marine sediment of Greek marinas.

    PubMed

    Hamwijk, C; Schouten, A; Foekema, E M; Ravensberg, J C; Collombon, M T; Schmidt, K; Kugler, M

    2005-09-01

    Dichlofluanid (N-dichlorofluoromethylthio-N'-dimethyl-N-phenylsulphamide) is used as booster biocide in antifouling paints. The occurrence of dichlofluanid and its metabolite DMSA (N'-dimethyl-N-phenyl-sulphamide) was monitored in seawater and marine sediment from three Greek marinas. Seawater and sediment samples were collected at three representative positions and one suspected hotspot in each marina and shipped to the laboratory for chemical analysis. As part of the project, an analytical method had been developed and validated. Furthermore, some additional experiments were carried out to investigate the potential contribution of paint particle bound dichlofluanid on the total concentration in the sediment. As expected, given its known high hydrolytic degradation rate, no detectable concentrations of dichlofluanid were measured in any of the seawater samples. DMSA was detected in seawater samples at very low concentrations varying from <3 ng l(-1) (LOD) to 36 ng l(-1). During method validation, it had already been demonstrated that dichlofluanid is unstable in sediment and can therefore only be determined as its metabolite DMSA. In a separate experiment, in which marine sediment was spiked with artificial paint particles containing dichlofluanid and then analysed according to the validated method, it was demonstrated that if there is any dichlofluanid originating from paint particles, this would be determined as DMSA. No DMSA was detected in any of the sediment samples. It could therefore be concluded that there were no significant concentrations of dichlofluanid in the sediment samples.

  15. Easy visualization of the protist Oxyrrhis marina grazing on a live fluorescently labelled heterotrophic nanoflagellate.

    PubMed

    Martín-Cereceda, Mercedes; Williams, Richard A J; Novarino, Gianfranco

    2008-07-01

    Planktonic heterotrophic flagellates are ubiquitous eukaryotic microorganisms that play a crucial role in carbon and nutrient fluxes through pelagic food webs. Here we illustrate for the first time a grazing model of planktonic dinoflagellate, Oxyrrhis marina, on the heterotrophic nanoflagellate Goniomonas amphinema, using the DNA-binding fluorescent dye Hoechst 33342. A solution of 1 microg/mL of the fluorochrome allowed viability of the prey for at least 48 hours, provided low fluorescence quenching, and labelled the flagellate without masking the cytoplasm. After 2 hours of contact between the fluorescent prey and the predator, O. marina population had preyed on live G. amphinema at an ingestion rate of 2.2 prey Oxyrrhis (-1) h(-1). Results show that this model is a time-effective and inexpensive approach for the direct observation of heterotrophic flagellate grazing. The fact that prey remain alive while predation occurs, as well as the low rate of quenching, could be of help in studying the fate of real-time trophic interactions between protists in microbial webs.

  16. Paraoerskovia marina gen. nov., sp. nov., an actinobacterium isolated from marine sediment.

    PubMed

    Khan, Shams Tabrez; Harayama, Shigeaki; Tamura, Tomohiko; Ando, Katsuhiko; Takagi, Motoki; Kazuo, Shin-ya

    2009-08-01

    A Gram-positive-staining, facultatively anaerobic bacterial strain, CTT-37T, was isolated from a marine sediment sample collected from Tottori city, located on the shore of the Sea of Japan. A 16S rRNA gene sequence comparison indicated that the isolate represents a novel clade that clusters with members of the families Cellulomonadaceae and Sanguibacteraceae. Strain CTT-37T shared maximum 16S rRNA gene sequence similarity of 96.4% with Oerskovia paurometabola DSM 14281T and 96.2% with Oerskovia enterophila DSM 43852T. The DNA-DNA hybridization value between strain CTT-37T and O. enterophila JCM 7350T was 10-12%. The following chemotaxonomic characteristics of strain CTT-37T were markedly different from those of strains in the genus Oerskovia. The cell wall contained L-serine in the peptidoglycan interpeptide bridge. The predominant menaquinone was MK-9 (H4); other quinones detected were MK-9 and MK-9(H2). The only polar lipid was phosphatidylglycerol and the G+C content of the DNA was 70 mol%. Differences in phenotypic characteristics and large phylogenetic distances between strain CTT-37T and all members of the genus Oerskovia supported the classification of CTT-37T within a new genus and species, for which the name Paraoerskovia marina gen. nov., sp. nov. is proposed. The type strain of Paraoerskovia marina is CTT-37T (=NBRC 104352T=DSM 21750T).

  17. Evaluation of antiherpetic activity of crude extract and fractions of Avicenna marina, in vitro.

    PubMed

    Behbahani, Mandana; Zadeh, Mehrnaz Shanehsaz; Mohabatkar, Hassan

    2013-03-01

    This study was carried out to check antiherpetic substances of crude methanol leaf extract of Avicenna marina and its column chromatographic fractions. Herpes simplex virus 2 (HSV-2) is a harmful pathogen especially in highly susceptible individuals. The antiherpetic activity of crude methanol extract and sub-fractions was performed in different concentrations (20, 2, 0.2, and 0.02μg/ml) by use of plaque-forming unit (PFU) assay and real time polymerase chain reaction (PCR) assay. The most active fraction analyzed by NMR contained luteolin 7-O-methylether 3'-O-beta-d-glucoside (LMEG). The other active fraction was detected by HPLC as luteolin. The apparent effective concentrations for 50% plaque reduction (EC50) of crude methanol extract, LMEG, luteolin and ACV were 10, 5, 16.6 and 2.97μg/ml, respectively. The three extracts showed no cytotoxic effect on Vero cell line at concentrations of 32μg/ml or below. According to the consequences of time-of-addition studies, antiherpetic compound LMEG exerted an inhibitory effect on the early stage of HSV-2 infection during which it was added. In conclusion, LMEG isolated from A. marina could probably inhibit HSV attachment to the cell membrane and its entry into the cell. Copyright © 2013 Elsevier B.V. All rights reserved.

  18. Characterisation of esterases as potential biomarkers of pesticide exposure in the lugworm Arenicola marina (Annelida: Polychaeta).

    PubMed

    Hannam, Marie L; Hagger, Josephine A; Jones, Malcolm B; Galloway, Tamara S

    2008-03-01

    Here, we identify and characterise cholinesterase (ChE) and carboxylesterase (CbE) activities in the body tissues of the sediment dwelling worm Arenicola marina. Exposure to the organophosphorus pesticide azamethiphos yielded an in vitro IC50 of 5 microg l(-1) for propionylcholinesterase (PChE). PChE was significantly inhibited in vivo after a 10 day exposure to 100 microg l(-1) azamethiphos, equivalent to the recommended aquatic application rate (ANOVA; F=2.75, P=0.033). To determine sensitivity to environmental conditions, A. marina were exposed for 10 days to field collected sediments. PChE activity was significantly lower in worms exposed to sediments from an estuary classified to be at high risk from point source pollution by the UK Environment Agency (ANOVA; F=15.33, P<0.001). Whilst causality cannot be directly attributed from these latter exposures, they provide an important illustration of the potential utility of esterase activity as a biomarker of environmental quality in this ecologically relevant sentinel species.

  19. Fungi and Bacteria in or on Leaves of Eelgrass (Zostera marina L.) from Chesapeake Bay †

    PubMed Central

    Newell, Steven Y.

    1981-01-01

    Samples of green and brown leaves of eelgrass (Zostera marina L.) were incubated in seawater without an additional carbon source. Parallel leaf samples were used for acridine orange bacterial counting and water-soluble aniline blue estimation of fungal biovolume. The incubations produced no evidence that there is an eelgrass counterpart for the chytridialean symbiont which is very common in turtlegrass (Thalassia testudinum König). Sterile mycelium (i.e., living mycelium without identifiable propagules) was the most prevalent fungal form on incubated samples from submerged sites, whereas Dendryphiella salina and Sigmoidea sp. (marina?) were prevalent on brown leaves from the wrack line. Attempts to assay fungal biovolume in field samples indicated that the sterile mycelium observed after incubation represented the outgrowth of formerly dormant propagules or weakly established microcolonies. It was calculated that fungal biomass could not account for more than 0.5% of leaf mass, and it was probably much smaller than this, for no fungal structures were observed even in concentrated leaf homogenates. Bacterial densities fell within the range reported for other particulate substrates. A speculative estimate of bacterial productivity was 1.4× the standing stock per day. PMID:16345773

  20. A tale of two seagrasses: Comparing the science and management of Zostera marina and Zostera japonica in the Pacific Northwest

    EPA Science Inventory

    On the Pacific coast of North America, at least two congeners of Zostera occur: native Zostera marina, and introduced, Z. japonica. Z. japonica is considered “invasive” and therefore, ecologically and economically harmful by some, while others consider it benign or perhaps benef...

  1. WATER QUALITY AT FIVE MARINAS IN LAKE TEXOMA AS RELATED TO METHYL TERT-BUTYL ETHER (MTBE)

    EPA Science Inventory

    Occurrence of methyl tert-butyl ether (MTBE) in five marinas was monitored between June 1999 and November 2000 in Lake Texoma located on the border of Oklahoma and Texas. MTBE is a commonly used gasoline additive and a suspected carcinogen. Lake water was collected at locations i...

  2. APPARENT LACK OF VESICULAR-ARBUSCULAR MYCORRHIZA (VAM) IN SEAGRASSES ZOSTERA MARINA L. AND THALASSIA TESTUDIUM BANKS EX KONIG

    EPA Science Inventory

    We examined two populations of Zostera marina L. and one of Thalassia testudinum Banks ex Konig for presence of vesicular-arbuscular mycorrhiza (VAM). None of these plants showed any VAM colonization. In addition, we were unable to find any literature references on the presence o...

  3. Fine-scale spatial distribution of the common lugworm Arenicola marina, and effects of intertidal clam fishing

    NASA Astrophysics Data System (ADS)

    Boldina, Inna; Beninger, Peter G.

    2014-04-01

    Despite its ubiquity and its role as an ecosystem engineer on temperate intertidal mudflats, little is known of the spatial ecology of the lugworm Arenicola marina. We estimated lugworm densities and analyzed the spatial distribution of A. marina on a French Atlantic mudflat subjected to long-term clam digging activities, and compared these to a nearby pristine reference mudflat, using a combination of geostatistical techniques: point-pattern analysis, autocorrelation, and wavelet analysis. Lugworm densities were an order of magnitude greater at the reference site. Although A. marina showed an aggregative spatial distribution at both sites, the characteristics and intensity of aggregation differed markedly between sites. The reference site showed an inhibition process (regular distribution) at distances <7.5 cm, whereas the impacted site showed a random distribution at this scale. At distances from 15 cm to several tens of meters, the spatial distribution of A. marina was clearly aggregated at both sites; however, the autocorrelation strength was much weaker at the impacted site. In addition, the non-impacted site presented multi-scale spatial distribution, which was not evident at the impacted site. The differences observed between the spatial distributions of the fishing-impacted vs. the non-impacted site reflect similar findings for other components of these two mudflat ecosystems, suggesting common community-level responses to prolonged mechanical perturbation: a decrease in naturally-occurring aggregation. This change may have consequences for basic biological characteristics such as reproduction, recruitment, growth, and feeding.

  4. Combined toxicity of cadmium and copper in Avicennia marina seedlings and the regulation of exogenous jasmonic acid.

    PubMed

    Yan, Zhongzheng; Li, Xiuzhen; Chen, Jun; Tam, Nora Fung-Yee

    2015-03-01

    Seedlings of Avicennia marina were exposed to single and combined metal treatments of cadmium (Cd) and copper (Cu) in a factorial design, and the combined toxicity of Cu and Cd was tested. The effects of the exogenous jasmonic acid (JA) on chlorophyll concentration, lipid peroxidation, Cd and Cu uptake, antioxidative capacity, endogenous JA concentration, and type-2 metallothionein gene (AmMT2) expression in seedlings of A. marina exposed to combined metal treatments were also investigated. A binary mixture of low-dose Cd (9 µmolL(-1)) and high-dose Cu (900 µmolL(-1)) showed toxicity to the seedlings, indicated by the significant augmentation in leaf malondialdehyde (MDA) and reduction in leaf chlorophylls. The toxicity of the combined metals was significantly alleviated by the addition of exogenous JA at 1 µmolL(-1), and the chlorophyll and MDA contents were found to be restored to levels comparable to those of the control. Compare to treatment with Cd and Cu only, 1 and 10 µmolL(-1) JA significantly enhanced the ascorbate peroxidase activity, and 10 µmolL(-1) JA significantly decreased the uptake of Cd in A. marina leaves. The relative expression of leaf AmMT2 gene was also significantly enhanced by 1 and 10 µmolL(-1) JA, which helped reduce Cd toxicity in A. marina seedlings. Copyright © 2014 Elsevier Inc. All rights reserved.

  5. Sediment Properties as Important Predictors of Carbon Storage in Zostera marina Meadows: A Comparison of Four European Areas

    PubMed Central

    Dahl, Martin; Deyanova, Diana; Gütschow, Silvia; Asplund, Maria E.; Lyimo, Liberatus D.; Karamfilov, Ventzislav; Santos, Rui; Björk, Mats; Gullström, Martin

    2016-01-01

    Seagrass ecosystems are important natural carbon sinks but their efficiency varies greatly depending on species composition and environmental conditions. What causes this variation is not fully known and could have important implications for management and protection of the seagrass habitat to continue to act as a natural carbon sink. Here, we assessed sedimentary organic carbon in Zostera marina meadows (and adjacent unvegetated sediment) in four distinct areas of Europe (Gullmar Fjord on the Swedish Skagerrak coast, Askö in the Baltic Sea, Sozopol in the Black Sea and Ria Formosa in southern Portugal) down to ~35 cm depth. We also tested how sedimentary organic carbon in Z. marina meadows relates to different sediment characteristics, a range of seagrass-associated variables and water depth. The seagrass carbon storage varied greatly among areas, with an average organic carbon content ranging from 2.79 ± 0.50% in the Gullmar Fjord to 0.17 ± 0.02% in the area of Sozopol. We found that a high proportion of fine grain size, high porosity and low density of the sediment is strongly related to high carbon content in Z. marina sediment. We suggest that sediment properties should be included as an important factor when evaluating high priority areas in management of Z. marina generated carbon sinks. PMID:27936111

  6. WATER QUALITY AT FIVE MARINAS IN LAKE TEXOMA AS RELATED TO METHYL TERT-BUTYL ETHER (MTBE)

    EPA Science Inventory

    Occurrence of methyl tert-butyl ether (MTBE) in five marinas was monitored between June 1999 and November 2000 in Lake Texoma located on the border of Oklahoma and Texas. MTBE is a commonly used gasoline additive and a suspected carcinogen. Lake water was collected at locations i...

  7. EFFECTS OF RECREATIONAL CLAM HARVESTING ON EELGRASS (ZOSTERA MARINA) AND ASSOCIATED INFAUNAL INVERTEBRATES: IN SITU MANIPULATIVE EXPERIMENTS

    EPA Science Inventory

    The effect of recreational clam harvesting on eelgrass (Zostera marina) was experimentally tested by raking or digging for clams in experimental 1-m2 plots located in a Yaquina Bay (Newport, OR) eelgrass meadow. After three monthly treatments, eelgrass measures of biomass, prima...

  8. A tale of two seagrasses: Comparing the science and management of Zostera marina and Zostera japonica in the Pacific Northwest

    EPA Science Inventory

    On the Pacific coast of North America, at least two congeners of Zostera occur: native Zostera marina, and introduced, Z. japonica. Z. japonica is considered “invasive” and therefore, ecologically and economically harmful by some, while others consider it benign or perhaps benef...

  9. EFFECTS OF RECREATIONAL CLAM HARVESTING ON EELGRASS (ZOSTERA MARINA) AND ASSOCIATED INFAUNAL INVERTEBRATES: IN SITU MANIPULATIVE EXPERIMENTS

    EPA Science Inventory

    The effect of recreational clam harvesting on eelgrass (Zostera marina) was experimentally tested by raking or digging for clams in experimental 1-m2 plots located in a Yaquina Bay (Newport, OR) eelgrass meadow. After three monthly treatments, eelgrass measures of biomass, prima...

  10. Zostera marina (eelgrass) growth and survival along a gradient ofnutrients and turbidity in the lower Chesapeake Bay

    USGS Publications Warehouse

    Moore, K.A.; Neckles, H.A.; Orth, R.J.

    1996-01-01

    Survival of transplanted Zostera marina L. (eelgrass), Z. marina growth,and environmental conditions were studied concurrently at a number of sitesin a southwestern tributary of the Chesapeake Bay to elucidate the factorslimiting macrophyte distribution in this region. Consistent differences insurvival of the transplants were observed, with no long-term survival at anyof the sites that were formerly vegetated with this species but thatcurrently remain unvegetated. Therefore, the current distribution of Z.marina likely represents the extent of suitable environmental conditions inthe region, and the lack of recovery into historically vegetated sites is notsolely due to lack of propagules. Poor long-term survival was related toseasonally high levels of water column light attenuation. Fall transplantsdied by the end of summer following exposure to levels of high springturbidity (K(d) > 3.0). Accumulation of an epiphyte matrix during the latespring (0.36 to 1.14 g g-1 dry wt) may also have contributed to thisstress. Differences in water column nutrient levels among sites during thefall and winter (10 to 15 ??M dissolved inorganic nitrogen and 1 ??Mdissolved inorganic phosphates) had no observable effect on epiphyteaccumulation or macrophyte growth. Salinity effects were minor and there wereno symptoms of disease. Although summertime conditions resulted indepressions in growth, they did not alone limit long-term survival. It issuggested that water quality conditions enhancing adequate seagrass growthduring the spring may be key to long-term Z. marina survival and successfulrecolonization in this region.

  11. An effective seed protection method for planting Zostera marina (eelgrass) seeds: Implications for their large-scale restoration.

    PubMed

    Zhang, Pei-Dong; Fang, Chao; Liu, Jie; Xu, Qiang; Li, Wen-Tao; Liu, Yan-Shan

    2015-06-15

    We describe an innovative method of planting Zostera marina (eelgrass) seeds in which hessian bags filled with high-silted sediments are used as a seed protecting device. Here, we evaluated the effectiveness of the method through a field seed-sowing experiment over a three year period. The suitable seed planting density required by the seeds of Z. marina in this method was also investigated. In the spring following seed distribution, seedling establishment rate of Z. marina subjected to different seed densities of 200-500seedsbag(-1) ranged from 16% to 26%. New eelgrass patches from seed were fully developed and well maintained after 2-3years following distribution. The seed planting density of 400seedsbag(-1) may be the most suitable for the establishment of new eelgrass patches. Our results demonstrate that seed-based restoration can be an effective restoration tool and the technique presented should be considered for future large-scale Z. marina restoration projects. Copyright © 2015 Elsevier Ltd. All rights reserved.

  12. Feeding by the heterotrophic dinoflagellate Oxyrrhis marina on the red-tide raphidophyte Heterosigma akashiwo: a potential biological method to control red tides using mass-cultured grazers.

    PubMed

    Jeong, Hae Jin; Kim, Jae Seong; Yoo, Yeong Du; Kim, Seong Taek; Kim, Tae Hoon; Park, Myung Gil; Lee, Chang Hoon; Seong, Kyeong Ah; Kang, Nam Seon; Shim, Jae Hyung

    2003-01-01

    As part of the development of a method to control the outbreak and persistence of red tides using mass-cultured heterotrophic protist grazers, we measured the growth and ingestion rates of cultured Oxyrrhis marina (a heterotrophic dinoflagellate) on cultured Heterosigma akashiwo (a raphidophyte) in bottles in the laboratory and in mesocosms (ca. 60 liter) in nature, and those of the cultured grazer on natural populations of the red-tide organism in mesocosms set up in nature. In the bottle incubation, specific growth rates of O. marina increased rapidly with increasing concentration of cultured prey up to ca. 950 ng C ml(-1) (equivalent to 9,500 cells ml(-1)), but were saturated at higher concentrations. Maximum specific growth rate (mumax), KGR (prey concentration sustaining 0.5 mumax) and threshold prey concentration of O. marina on H. akashiwo were 1.43 d(-1), 104 ng C ml(-1), and 8.0 ng C ml(-1), respectively. Maximum ingestion and clearance rates of O. marina were 1.27 ng C grazer(-1) d(-1) and 0.3 microl grazer(-1) h(-1), respectively. Cultured O. marina grew well effectively reducing cultured and natural populations of H. akashiwo down to a very low concentration within 3 d in the mesocosms. The growth and ingestion rates of cultured O. marina on natural populations of H. akashiwo in the mesocosms were 39% and 40%, respectively, of those calculated based on the results from the bottle incubation in the laboratory, while growth and ingestion rates of cultured O. marina on cultured H. akashiwo in the mesocosms were 55% and 36%, respectively. Calculated grazing impact by O. marina on natural populations of H. akashiwo suggests that O. marina cultured on a large scale could be used for controlling red tides by H. akashiwo near aquaculture farms that are located in small ponds, lagoons, semi-enclosed bays, and large land-aqua tanks to which fresh seawater should be frequently supplied.

  13. Sulfated polysaccharides as bioactive agents from marine algae.

    PubMed

    Ngo, Dai-Hung; Kim, Se-Kwon

    2013-11-01

    Recently, much attention has been paid by consumers toward natural bioactive compounds as functional ingredients in nutraceuticals. Marine algae are considered as valuable sources of structurally diverse bioactive compounds. Marine algae are rich in sulfated polysaccharides (SPs) such as carrageenans in red algae, fucoidans in brown algae and ulvans in green algae. These SPs exhibit many health beneficial nutraceutical effects such as antioxidant, anti-allergic, anti-human immunodeficiency virus, anticancer and anticoagulant activities. Therefore, marine algae derived SPs have great potential to be further developed as medicinal food products or nutraceuticals in the food industry. This contribution presents an overview of nutraceutical effects and potential health benefits of SPs derived from marine algae.

  14. The transcriptome of the novel dinoflagellate Oxyrrhis marina (Alveolata: Dinophyceae): response to salinity examined by 454 sequencing.

    PubMed

    Lowe, Chris D; Mello, Luciane V; Samatar, Najma; Martin, Laura E; Montagnes, David J S; Watts, Phillip C

    2011-10-20

    The heterotrophic dinoflagellate Oxyrrhis marina is increasingly studied in experimental, ecological and evolutionary contexts. Its basal phylogenetic position within the dinoflagellates make O. marina useful for understanding the origin of numerous unusual features of the dinoflagellate lineage; its broad distribution has lent O. marina to the study of protist biogeography; and nutritive flexibility and eurytopy have made it a common lab rat for the investigation of physiological responses of marine heterotrophic flagellates. Nevertheless, genome-scale resources for O. marina are scarce. Here we present a 454-based transcriptome survey for this organism. In addition, we assess sequence read abundance, as a proxy for gene expression, in response to salinity, an environmental factor potentially important in determining O. marina spatial distributions. Sequencing generated ~57 Mbp of data which assembled into 7, 398 contigs. Approximately 24% of contigs were nominally identified by BLAST. A further clustering of contigs (at ≥ 90% identity) revealed 164 transcript variant clusters, the largest of which (Phosphoribosylaminoimidazole-succinocarboxamide synthase) was composed of 28 variants displaying predominately synonymous variation. In a genomic context, a sample of 5 different genes were demonstrated to occur as tandem repeats, separated by short (~200-340 bp) inter-genic regions. For HSP90 several intergenic variants were detected suggesting a potentially complex genomic arrangement. In response to salinity, analysis of 454 read abundance highlighted 9 and 20 genes over or under expressed at 50 PSU, respectively. However, 454 read abundance and subsequent qPCR validation did not correlate well - suggesting that measures of gene expression via ad hoc analysis of sequence read abundance require careful interpretation. Here we indicate that tandem gene arrangements and the occurrence of multiple transcribed gene variants are common and indicate potentially complex

  15. Water vapor, whence comest thou.

    NASA Technical Reports Server (NTRS)

    Freeman, J. W., Jr.; Hills, H. K.; Vondrak, R. R.

    1972-01-01

    During a 14-hour period on Mar. 7, 1971, the Apollo 14 ALSEP suprathermal ion detector experiment (SIDE) observed an intense, prolonged series of bursts of 48.6-eV ions at the lunar surface. The SIDE mass analyzer showed the mass per unit charge of these ions to be characteristic of water vapor if singly ionized. The event was also observed by the SIDE total ion detectors (TIDs) at the Apollo 14 site and at Apollo 12 (located 183 km to the west). The TID data from SIDE 14 indicate that the energy spectrum was narrower than the 20-eV interval between energy channels. Ion spectra due to the LM exhaust gases are shown to be readily identified by the SIDE and are distinctly different in character from the spectra obtained on March 7. Detailed consideration of other possible sources of water, including the Apollo 14 CSM, leads to the conclusion that the water vapor did not come from a man-made source. Also, it is estimated that the event may have involved a quantity of water much greater than that which has been artificially introduced into the lunar environment. Consequently, it appears to be of lunar origin.

  16. Rhizobial strains isolated from nodules of Medicago marina in southwest Spain are abiotic-stress tolerant and symbiotically diverse.

    PubMed

    Alías-Villegas, Cynthia; Cubo, M Teresa; Lara-Dampier, Victoria; Bellogín, Ramón A; Camacho, María; Temprano, Francisco; Espuny, M Rosario

    2015-10-01

    The isolation and characterisation of nitrogen-fixing root nodule bacteria from Medicago marina, a tolerant legume species, were studied in two areas from southwest Spain. A total of 30 out of 82 isolates with distinct ERIC-PCR fingerprints were analysed on the basis of molecular (PCR-RFLP of the 16S-23S rDNA intergenic spacer region (IGS) with two endonucleases, analysis of the 16S rDNA and symbiotic nodC gene sequences, plasmid profiles and SDS-PAGE of LPS, including the partial sequence of the housekeeping gene glnII and the symbiotic gene nodA of some representatives), physiological (utilisation of sole carbon sources, tolerance to antibiotics, NaCl, heavy metals, temperature and pH) and symbiotic parameters (efficacy on M. marina, M. minima, M. murex, M. orbicularis, M. polymorpha, M. sativa and M. truncatula). All the bacteria isolated from M. marina nodules belonged to Ensifer meliloti, except for one strain that belonged to E. medicae. To determine the nodulation range of M. marina, 10 different Ensifer species were tested for their ability to nodulate on this plant. E. kummerowiae CCBAU 71714 and the E. medicae control strain M19.1 were the only Ensifer species tested that developed nitrogen-fixing nodules on this plant. Most of the M. marina-nodulating strains showed tolerance to stress factors and all of them shared the presence of a gene similar to cadA, a gene that encodes for a PIB-type ATPase, which is a transporter belonging to the large superfamily of ATP-driven pumps involved in the transport of metals across cell membranes. Copyright © 2015 Elsevier GmbH. All rights reserved.

  17. Relationships Between Seed Germinability of Spergularia marina (Caryophyllaceae) and the Formation of Zonal Communities in an Inland Salt Marsh

    PubMed Central

    CARTER, CHRISTY T.; UNGAR, IRWIN A.

    2004-01-01

    • Background and Aims The formation of zonal communities may be attributed to differences in germination across the community and to timing of germination of seeds present in the seed bank. Our goals were two‐fold: (1) to assess the annual germination pattern of Spergularia marina; and (2) to determine whether germination of S. marina differed across zonal communities. • Methods Fresh seeds were buried in an experimental garden in polyester bags. Bags were harvested monthly for 1 year and exposed to differing 12 h/12 h temperature regimes (5/15 °C, 5/25 °C, 15/25 °C and 20/35 °C) with a 12 h dark/12 h light photoperiod. Replicate seeds were exposed to 24 h dark. Seeds were also placed in different zonal communities to assess germinability in the field. • Key Results Spergularia marina has a primary physiological dormancy. Conditional dormancy occurs from December to May and non‐dormancy from June to November. Field germination initiates in the spring when temperatures are cool and salinity is low due to flooding, and ceases in the summer when temperatures exceed germination requirements. Spergularia marina has a light requirement for germination. • Conclusions If seeds become buried in the field or are light inhibited by Phragmites australis, they will remain dormant until they receive an adequate amount of light for germination. Since S. marina can germinate across all zones in a salt‐marsh community, the formation of zonal communities is not determined at the germination stage, but at some later stage of development. PMID:14672911

  18. Genome-wide transcriptomic responses of the seagrasses Zostera marina and Nanozostera noltii under a simulated heatwave confirm functional types.

    PubMed

    Franssen, Susanne U; Gu, Jenny; Winters, Gidon; Huylmans, Ann-Kathrin; Wienpahl, Isabell; Sparwel, Maximiliane; Coyer, James A; Olsen, Jeanine L; Reusch, Thorsten B H; Bornberg-Bauer, Erich

    2014-06-01

    Genome-wide transcription analysis between related species occurring in overlapping ranges can provide insights into the molecular basis underlying different ecological niches. The co-occurring seagrass species, Zostera marina and Nanozostera noltii, are found in marine coastal environments throughout the northern hemisphere. Z. marina is often dominant in subtidal environments and subjected to fewer temperature extremes compared to the predominately intertidal and more stress-tolerant N. noltii. We exposed plants of both species to a realistic heat wave scenario in a common-stress-garden experiment. Using RNA-seq (~7million reads/library), four Z. marina and four N. noltii libraries were compared representing northern (Denmark) and southern (Italy) locations within the co-occurring range of the species' European distribution. A total of 8977 expressed genes were identified, of which 78 were directly related to heat stress. As predicted, both species were negatively affected by the heat wave, but showed markedly different molecular responses. In Z. marina the heat response was similar across locations in response to the heatwave at 26°C, with a complex response in functions related to protein folding, synthesis of ribosomal chloroplast proteins, proteins involved in cell wall modification and heat shock proteins (HSPs). In N. noltii the heat response markedly differed between locations, while HSP genes were not induced in either population. Our results suggest that as coastal seawater temperatures increase, Z. marina will disappear along its southern most ranges, whereas N. noltii will continue to move north. As a consequence, sub- and intertidal habitat partitioning may weaken in more northern regions because the higher thermal tolerance of N. noltii provides a competitive advantage in both habitats. Although previous studies have focused on HSPs, the present study clearly demonstrates that a broader examination of stress related genes is necessary.

  19. Mangrove distribution and mosquito control: transport of Avicennia marina propagules by mosquito-control runnels in southeast Queensland saltmarshes

    NASA Astrophysics Data System (ADS)

    Breitfuss, M. J.; Connolly, R. M.; Dale, P. E. R.

    2003-03-01

    The saltmarsh-mangrove interface generally constitutes the landward boundary for the grey mangrove Avicennia marina var. australasica, the most widespread species on southeast Queensland shores. A. marina produces buoyant propagules, which are dispersed by tidal waters, only infrequently transported to saltmarsh by the highest spring tides. We predicted that runnelling, a form of habitat modification for mosquito control, transports and deposits mangrove propagules to saltmarsh because the runnels carry low-amplitude tides that would not normally inundate higher regions of the marsh. To test this, groups of marked A. marina propagules were released at three runnelled saltmarshes in southeast Queensland during high-amplitude, flooding and low-amplitude, non-flooding tidal events. The distance propagules were transported from their original starting positions on the saltmarsh-mangrove interface was measured and analysed to detect differences among groups at different distances from runnels. Groups of propagules released within 10 m of a runnel were always transported significantly further from the starting position and further up the saltmarsh shore after both flooding and non-flooding tides than any other groups. In addition, the pattern of stranding on saltmarsh for significantly different groups was closely associated with the path of runnel construction so that propagules were located either in the runnel or in depressions linked to the runnel that had been isolated mosquito-breeding pools prior to runnelling. Observations of A. marina plants at other runnelled sites suggest that propagules transported by runnels can establish and develop to maturity, at least in depressions and runnels, in saltmarsh. The fact that runnels transport propagules to regions of the saltmarsh beyond their normal limits of dispersion suggests a possible advantage for landward extension of the intertidal distribution of A. marina at runnelled sites and should be considered in saltmarsh

  20. Assessment of biotic response to heavy metal contamination in Avicennia marina mangrove ecosystems in Sydney Estuary, Australia.

    PubMed

    Nath, Bibhash; Chaudhuri, Punarbasu; Birch, Gavin

    2014-09-01

    Mangrove forests act as a natural filter of land-derived wastewaters along industrialized tropical and sub-tropical coastlines and assist in maintaining a healthy living condition for marine ecosystems. Currently, these intertidal communities are under serious threat from heavy metal contamination induced by human activity associated with rapid urbanization and industrialization. Studies on the biotic responses of these plants to heavy metal contamination are of great significance in estuary management and maintaining coastal ecosystem health. The main objective of the present investigation was to assess the biotic response in Avicennia marina ecosystems to heavy metal contamination through the determination of metal concentrations in leaves, fine nutritive roots and underlying sediments collected in fifteen locations across Sydney Estuary (Australia). Metal concentrations (especially Cu, Pb and Zn) in the underlying sediments of A. marina were enriched to a level (based on Interim Sediment Quality Guidelines) at which adverse biological effects to flora could occasionally occur. Metals accumulated in fine nutritive roots greater than underlying sediments, however, only minor translocation of these metals to A. marina leaves was observed (mean translocation factors, TFs, for all elements <0.13, except for Mn). Translocation factors of essential elements (i.e., common plant micro-nutrients, Cu, Ni, Mn and Zn) were greater than non-essential elements (As, Cd, Co, Cr and Pb), suggesting that A. marina mangroves of this estuary selectively excluded non-essential elements, while regulating essential elements and limiting toxicity to plants. This study supports the notion that A. marina mangroves act as a phytostabilizer in this highly modified estuary thereby protecting the aquatic ecosystem from point or non-point sources of heavy metal contamination.

  1. Changes in subtidal assemblages in a scenario of warming: proliferations of ephemeral benthic algae in the Canary Islands (eastern Atlantic Ocean).

    PubMed

    Sangil, Carlos; Sansón, Marta; Afonso-Carrillo, Julio; Herrera, Rogelio; Rodríguez, Adriana; Martín-García, Laura; Díaz-Villa, Tania

    2012-06-01

    The present work analysed the main changes in subtidal algal assemblages in the last decade in an oceanic archipelago (Canary Islands--eastern Atlantic Ocean). Changes result from increases in cover of ephemeral benthic algae, such as the non-native chlorophyte Pseudotetraspora marina and the native cyanophytes Blennothrix lyngbyacea, Schizothrix calcicola and Schizothrix mexicana. Ephemeral algae overgrow subtidal assemblages which are extensively dominated by Lobophora variegata, but competitively do not exclude other species. Increases in the abundance of species coincided with a warming of about 2 °C in surface seawater temperature (SST) linked to the weakening of the Cold Canary Current and the Northwestern African upwelling. Shifts in the distribution and cover of ephemeral species follow the SST gradient from warmer waters in the western islands to colder waters in the eastern ones. While in the warmest western islands, species have spread quickly colonizing all type of substrates in just a few years (2005-2008), the occurrence of ephemerals towards the coldest eastern islands is yet inconspicuous. Copyright © 2012 Elsevier Ltd. All rights reserved.

  2. Frugivory by insects on mangrove propagules: effects on the early life history of Avicennia marina.

    PubMed

    Minchinton, Todd E; Dalby-Ball, Mia

    2001-10-01

    This study investigates how herbivory by larval insects on fruit of the mangrove Avicennia marina affects the subsequent establishment, growth, and survivorship of its seedlings. Research was done in a temperate mangrove forest in Australia where the larvae of two species of insects were the dominant frugivores: the mangrove fruit fly Euphranta marina and the mangrove plume moth Cenoloba obliteralis. Larvae consumed the cotyledons of fruit, but not their embryonic axes. Damage to the cotyledons of fruit while on the tree was obvious in abscised propagules and the cotyledons of seedlings, indicating that larvae within fruit continue to consume the cotyledons and develop while the propagule disperses and the seedling establishes. We found that 53% of fruit, 69% of abscised propagules, and 80% of the cotyledons of seedlings had been attacked by larval insects. The degree of damage to the cotyledons was positively related to the densities of larvae within the fruit and the number of emergence or exit holes in the surface of the cotyledons. Consequently, the number of exit holes could be used as a proxy for the amount of damage to the cotyledons. An experiment in which we placed propagules with different levels of damage (zero, one, two, or three exit holes) on the forest floor revealed that frugivory did not influence the establishment of seedlings. In another experiment, we monitored the performance of newly established seedlings with cotyledons that had zero exit holes, one or more exit holes, or where we had removed their cotyledons. In both experiments, the growth of seedlings as measured by their heights and number of leaves was negatively related to the degree of frugivory. Consumption of the cotyledons by larvae apparently reduces the energy reserves available for the initial growth of seedlings. The early mortality of seedlings in both experiments was minimal and appeared to be independent of differences in size due to frugivory. Experimentally removing the

  3. Comparing the performance of species distribution models of Zostera marina: Implications for conservation

    NASA Astrophysics Data System (ADS)

    Valle, Mireia; van Katwijk, Marieke M.; de Jong, Dick J.; Bouma, Tjeerd J.; Schipper, Aafke M.; Chust, Guillem; Benito, Blas M.; Garmendia, Joxe M.; Borja, Ángel

    2013-10-01

    Intertidal seagrasses show high variability in their extent and location, with local extinctions and (re-)colonizations being inherent in their population dynamics. Suitable habitats are identified usually using Species Distribution Models (SDM), based upon the overall distribution of the species; thus, accounting solely for spatial variability. To include temporal effects caused by large interannual variability, we constructed SDMs for different combinations and fusions of yearly distribution data. The main objectives were to: (i) assess the spatio-temporal dynamics of an intertidal seagrass bed of Zostera marina; (ii) select the most accurate SDM techniques to model different temporal distribution data subsets of the species; (iii) assess the relative importance of the environmental variables for each data subset; and (iv) evaluate the accuracy of the models to predict species conservation areas, addressing implications for management. To address these objectives, a time series of 14-year distribution data of Zostera marina in the Ems estuary (The Netherlands) was used to build different data subsets: (1) total presence area; (2) a conservative estimate of the total presence area, defined as the area which had been occupied during at least 4 years; (3) core area, defined as the area which had been occupied during at least 2/3 of the total period; and (4-6) three random selections of monitoring years. On average, colonized and disappeared areas of the species in the Ems estuary showed remarkably similar transition probabilities of 12.7% and 12.9%, respectively. SDMs based upon machine-learning methods (Boosted Regression Trees and Random Forest) outperformed regression-based methods. Current velocity and wave exposure were the most important variables predicting the species presence for widely distributed data. Depth and sea floor slope were relevant to predict conservative presence area and core area. It is concluded that, the fusion of the spatial distribution

  4. Uric acid deposits in symbiotic marine algae.

    PubMed

    Clode, Peta L; Saunders, Martin; Maker, Garth; Ludwig, Martha; Atkins, Craig A

    2009-02-01

    The symbiosis between cnidarians and dinoflagellate algae is not understood at the cell or molecular level, yet this relationship is responsible for the formation of thousands of square kilometres of coral reefs. We have investigated the nature of crystalline material prominent within marine algal symbionts of Aiptasia sp. anemones. This material, which has historically been considered to be calcium oxalate, is shown to be uric acid. We demonstrate that these abundant uric acid stores can be mobilized rapidly, thereby allowing the algal symbionts to flourish in an otherwise N-poor environment. This is the first report of uric acid accumulation by symbiotic marine algae. These data provide new insight and considerations for understanding the physiological basis of algal symbioses, and represent a new and previously unconsidered aspect of N metabolism in cnidarian, and a variety of other, marine symbioses.

  5. Hydrogen production by photosynthetic green algae.

    PubMed

    Ghirardi, Maria L

    2006-08-01

    Oxygenic photosynthetic organisms such as cyanobacteria, green algae and diatoms are capable of absorbing light and storing up to 10-13% of its energy into the H-H bond of hydrogen gas. This process, which takes advantage of the photosynthetic apparatus of these organisms to convert sunlight into chemical energy, could conceivably be harnessed for production of significant amounts of energy from a renewable resource, water. The harnessed energy could then be coupled to a fuel cell for electricity generation and recycling of water molecules. In this review, current biochemical understanding of this reaction in green algae, and some of the major challenges facing the development of future commercial algal photobiological systems for H2 production have been discussed.

  6. Engineering algae for biohydrogen and biofuel production.

    PubMed

    Beer, Laura L; Boyd, Eric S; Peters, John W; Posewitz, Matthew C

    2009-06-01

    There is currently substantial interest in utilizing eukaryotic algae for the renewable production of several bioenergy carriers, including starches for alcohols, lipids for diesel fuel surrogates, and H2 for fuel cells. Relative to terrestrial biofuel feedstocks, algae can convert solar energy into fuels at higher photosynthetic efficiencies, and can thrive in salt water systems. Recently, there has been considerable progress in identifying relevant bioenergy genes and pathways in microalgae, and powerful genetic techniques have been developed to engineer some strains via the targeted disruption of endogenous genes and/or transgene expression. Collectively, the progress that has been realized in these areas is rapidly advancing our ability to genetically optimize the production of targeted biofuels.

  7. Algae columns with anodic stripping voltammetric detection

    SciTech Connect

    Kubiak, W.W.; Wang, J.; Darnall, D.

    1989-03-01

    The use of silica-immobilized algal cells for on-line column separation in conjunction with continuous monitoring of trace metals is described. Algae-silica preparations are highly suitable for flow analysis as they couple the unique reactivity patterns and high binding capacity of algal biomass with the hydrodynamic and mechanical features of porous silica. Such advantages are illustrated by using on-line anodic stripping voltammetry and the alga Chlorella pyrenidosa. Selective and exhaustive removal of interfering constituents circumvents common problems such as overlapping peaks and intermetallic effects. Effects of flow rate, pH, operation time, and other variables are reported. The system is characterized by high durability, simplicity, and economy and offers an attractive alternative to prevalent columns used for flow analysis.

  8. Biofuels from algae: challenges and potential.

    PubMed

    Hannon, Michael; Gimpel, Javier; Tran, Miller; Rasala, Beth; Mayfield, Stephen

    2010-09-01

    Algae biofuels may provide a viable alternative to fossil fuels; however, this technology must overcome a number of hurdles before it can compete in the fuel market and be broadly deployed. These challenges include strain identification and improvement, both in terms of oil productivity and crop protection, nutrient and resource allocation and use, and the production of co-products to improve the economics of the entire system. Although there is much excitement about the potential of algae biofuels, much work is still required in the field. In this article, we attempt to elucidate the major challenges to economic algal biofuels at scale, and improve the focus of the scientific community to address these challenges and move algal biofuels from promise to reality.

  9. Biofuels from algae: challenges and potential

    PubMed Central

    Hannon, Michael; Gimpel, Javier; Tran, Miller; Rasala, Beth; Mayfield, Stephen

    2011-01-01

    Algae biofuels may provide a viable alternative to fossil fuels; however, this technology must overcome a number of hurdles before it can compete in the fuel market and be broadly deployed. These challenges include strain identification and improvement, both in terms of oil productivity and crop protection, nutrient and resource allocation and use, and the production of co-products to improve the economics of the entire system. Although there is much excitement about the potential of algae biofuels, much work is still required in the field. In this article, we attempt to elucidate the major challenges to economic algal biofuels at scale, and improve the focus of the scientific community to address these challenges and move algal biofuels from promise to reality. PMID:21833344

  10. Algae-Derived Dietary Ingredients Nourish Animals

    NASA Technical Reports Server (NTRS)

    2015-01-01

    In the 1980s, Columbia, Maryland-based Martek Biosciences Corporation worked with Ames Research Center to pioneer the use of microalgae as a source of essential omega-3 fatty acids, work that led the company to develop its highly successful Formulaid product. Now the Nutritional Products Division of Royal DSM, the company also manufactures DHAgold, a nutritional supplement for pets, livestock and farm-raised fish that uses algae to deliver docosahexaenoic acid (DHA).

  11. Sequestration of CO2 by halotolerant algae

    PubMed Central

    2014-01-01

    The potential of halotolerant algae isolated from natural resources was used to study CO2 fixation and algal lipid production. Biological fixation of CO2 in photobioreactor in presence of salinity is exploited. The CO2 concentration 1060 ppm gave the highest biomass yield (700 mg dry wt/l), the highest total lipid content (10.33%) with 80% of CO2 removal. PMID:24847439

  12. Selenium Uptake and Volatilization by Marine Algae

    NASA Astrophysics Data System (ADS)

    Luxem, Katja E.; Vriens, Bas; Wagner, Bettina; Behra, Renata; Winkel, Lenny H. E.

    2015-04-01

    Selenium (Se) is an essential trace nutrient for humans. An estimated one half to one billion people worldwide suffer from Se deficiency, which is due to low concentrations and bioavailability of Se in soils where crops are grown. It has been hypothesized that more than half of the atmospheric Se deposition to soils is derived from the marine system, where microorganisms methylate and volatilize Se. Based on model results from the late 1980s, the atmospheric flux of these biogenic volatile Se compounds is around 9 Gt/year, with two thirds coming from the marine biosphere. Algae, fungi, and bacteria are known to methylate Se. Although algal Se uptake, metabolism, and methylation influence the speciation and bioavailability of Se in the oceans, these processes have not been quantified under environmentally relevant conditions and are likely to differ among organisms. Therefore, we are investigating the uptake and methylation of the two main inorganic Se species (selenate and selenite) by three globally relevant microalgae: Phaeocystis globosa, the coccolithophorid Emiliania huxleyi, and the diatom Thalassiosira oceanica. Selenium uptake and methylation were quantified in a batch experiment, where parallel gas-tight microcosms in a climate chamber were coupled to a gas-trapping system. For E. huxleyi, selenite uptake was strongly dependent on aqueous phosphate concentrations, which agrees with prior evidence that selenite uptake by phosphate transporters is a significant Se source for marine algae. Selenate uptake was much lower than selenite uptake. The most important volatile Se compounds produced were dimethyl selenide, dimethyl diselenide, and dimethyl selenyl sulfide. Production rates of volatile Se species were larger with increasing intracellular Se concentration and in the decline phase of the alga. Similar experiments are being carried out with P. globosa and T. oceanica. Our results indicate that marine algae are important for the global cycling of Se

  13. Algae as reservoirs for coral pathogens.

    PubMed

    Sweet, Michael J; Bythell, John C; Nugues, Maggy M

    2013-01-01

    Benthic algae are associated with coral death in the form of stress and disease. It's been proposed that they release exudates, which facilitate invasion of potentially pathogenic microbes at the coral-algal interface, resulting in coral disease. However, the original source of these pathogens remains unknown. This study examined the ability of benthic algae to act as reservoirs of coral pathogens by characterizing surface associated microbes associated with major Caribbean and Indo-Pacific algal species/types and by comparing them to potential pathogens of two dominant coral diseases: White Syndrome (WS) in the Indo-Pacific and Yellow Band Disease (YBD) in the Caribbean. Coral and algal sampling was conducted simultaneously at the same sites to avoid spatial effects. Potential pathogens were defined as those absent or rare in healthy corals, increasing in abundance in healthy tissues adjacent to a disease lesion, and dominant in disease lesions. Potentially pathogenic bacteria were detected in both WS and YBD and were also present within the majority of algal species/types (54 and 100% for WS and YBD respectively). Pathogenic ciliates were associated only with WS and not YBD lesions and these were also present in 36% of the Indo-Pacific algal species. Although potential pathogens were associated with many algal species, their presence was inconsistent among replicate algal samples and detection rates were relatively low, suggestive of low density and occurrence. At the community level, coral-associated microbes irrespective of the health of their host differed from algal-associated microbes, supporting that algae and corals have distinctive microbial communities associated with their tissue. We conclude that benthic algae are common reservoirs for a variety of different potential coral pathogens. However, algal-associated microbes alone are unlikely to cause coral death. Initial damage or stress to the coral via other competitive mechanisms is most likely a

  14. Prokaryotic algae associated with Australian proterozoic stromatolites.

    NASA Technical Reports Server (NTRS)

    Licari, G. R.; Cloud, P.

    1972-01-01

    The most favorable sites in which to study the associations between stromatolites and the algae responsible for them are places where a variety of stromatolites of possibly early diagenetic or primary silica occupy a layer of substantial thickness of little metamorphosed ancient sediments. One such place is in northwestern Queensland, Australia. Five cases of association between stromatolites and blue-green algal nannofossils were observed within a 100-m sequence of carbonate rocks in that area.

  15. Fermentation metabolism and its evolution in algae

    PubMed Central

    Catalanotti, Claudia; Yang, Wenqiang; Posewitz, Matthew C.; Grossman, Arthur R.

    2013-01-01

    Fermentation or anoxic metabolism allows unicellular organisms to colonize environments that become anoxic. Free-living unicellular algae capable of a photoautotrophic lifestyle can also use a range of metabolic circuitry associated with different branches of fermentation metabolism. While algae that perform mixed-acid fermentation are widespread, the use of anaerobic respiration is more typical of eukaryotic heterotrophs. The occurrence of a core set of fermentation pathways among the algae provides insights into the evolutionary origins of these pathways, which were likely derived from a common ancestral eukaryote. Based on genomic, transcriptomic, and biochemical studies, anaerobic energy metabolism has been examined in more detail in Chlamydomonas reinhardtii (Chlamydomonas) than in any other photosynthetic protist. This green alga is metabolically flexible and can sustain energy generation and maintain cellular redox balance under a variety of different environmental conditions. Fermentation metabolism in Chlamydomonas appears to be highly controlled, and the flexible use of the different branches of fermentation metabolism has been demonstrated in studies of various metabolic mutants. Additionally, when Chlamydomonas ferments polysaccharides, it has the ability to eliminate part of the reductant (to sustain glycolysis) through the production of H2, a molecule that can be developed as a source of renewable energy. To date, little is known about the specific role(s) of the different branches of fermentation metabolism, how photosynthetic eukaryotes sense changes in environmental O2 levels, and the mechanisms involved in controlling these responses, at both the transcriptional and post-transcriptional levels. In this review, we focus on fermentation metabolism in Chlamydomonas and other protists, with only a brief discussion of plant fermentation when relevant, since it is thoroughly discussed in other articles in this volume. PMID:23734158

  16. Studies on Polyethers Produced by Red Algae

    PubMed Central

    Cen-Pacheco, Francisco; Nordström, Laurette; Souto, María Luisa; Martín, Manuel Norte; Fernández, José Javier; Daranas, Antonio Hernández

    2010-01-01

    Two novel squalene-derived triterpenes, spirodehydrovenustatriol (3) and 14-keto-dehydrothyrsiferol (4) were isolated from the red alga Laurencia viridis, together with two new and unusual C17 terpenoids, adejen A (5) and B (6). These truncated structures possess structural similarities with other known squalene metabolites and their biogenetic origin has been proposed on the basis of an oxidative process of the squalene skeleton. All the structures were elucidated by extensive use of 2D NMR spectroscopic methods. PMID:20479973

  17. Prokaryotic algae associated with Australian proterozoic stromatolites.

    NASA Technical Reports Server (NTRS)

    Licari, G. R.; Cloud, P.

    1972-01-01

    The most favorable sites in which to study the associations between stromatolites and the algae responsible for them are places where a variety of stromatolites of possibly early diagenetic or primary silica occupy a layer of substantial thickness of little metamorphosed ancient sediments. One such place is in northwestern Queensland, Australia. Five cases of association between stromatolites and blue-green algal nannofossils were observed within a 100-m sequence of carbonate rocks in that area.

  18. Algae as Reservoirs for Coral Pathogens

    PubMed Central

    Sweet, Michael J.; Bythell, John C.; Nugues, Maggy M.

    2013-01-01

    Benthic algae are associated with coral death in the form of stress and disease. It's been proposed that they release exudates, which facilitate invasion of potentially pathogenic microbes at the coral-algal interface, resulting in coral disease. However, the original source of these pathogens remains unknown. This study examined the ability of benthic algae to act as reservoirs of coral pathogens by characterizing surface associated microbes associated with major Caribbean and Indo-Pacific algal species/types and by comparing them to potential pathogens of two dominant coral diseases: White Syndrome (WS) in the Indo-Pacific and Yellow Band Disease (YBD) in the Caribbean. Coral and algal sampling was conducted simultaneously at the same sites to avoid spatial effects. Potential pathogens were defined as those absent or rare in healthy corals, increasing in abundance in healthy tissues adjacent to a disease lesion, and dominant in disease lesions. Potentially pathogenic bacteria were detected in both WS and YBD and were also present within the majority of algal species/types (54 and 100% for WS and YBD respectively). Pathogenic ciliates were associated only with WS and not YBD lesions and these were also present in 36% of the Indo-Pacific algal species. Although potential pathogens were associated with many algal species, their presence was inconsistent among replicate algal samples and detection rates were relatively low, suggestive of low density and occurrence. At the community level, coral-associated microbes irrespective of the health of their host differed from algal-associated microbes, supporting that algae and corals have distinctive microbial communities associated with their tissue. We conclude that benthic algae are common reservoirs for a variety of different potential coral pathogens. However, algal-associated microbes alone are unlikely to cause coral death. Initial damage or stress to the coral via other competitive mechanisms is most likely a

  19. Algae: America’s Pathway to Independence

    DTIC Science & Technology

    2007-03-30

    Bioenergy, Biofuel, Energy Policy CLASSIFICATION: Unclassified The United States is dependent on foreign oil to meet 63% of its petroleum demand...source of bioenergy. ALGAE: AMERICA’S PATHWAY TO INDEPENDENCE Ensuring a secure supply of energy is a strategic challenge for...150 years,6 the U.S. will be competing with other nations to procure the 2 finite commodity. The Department of Energy (DOE) estimates that by the

  20. Environmental life cycle comparison of algae to other bioenergy feedstocks.

    PubMed

    Clarens, Andres F; Resurreccion, Eleazer P; White, Mark A; Colosi, Lisa M

    2010-03-01

    Algae are an attractive source of biomass energy since they do not compete with food crops and have higher energy yields per area than terrestrial crops. In spite of these advantages, algae cultivation has not yet been compared with conventional crops from a life cycle perspective. In this work, the impacts associated with algae production were determined using a stochastic life cycle model and compared with switchgrass, canola, and corn farming. The results indicate that these conventional crops have lower environmental impacts than algae in energy use, greenhouse gas emissions, and water regardless of cultivation location. Only in total land use and eutrophication potential do algae perform favorably. The large environmental footprint of algae cultivation is driven predominantly by upstream impacts, such as the demand for CO(2) and fertilizer. To reduce these impacts, flue gas and, to a greater extent, wastewater could be used to offset most of the environmental burdens associated with algae. To demonstrate the benefits of algae production coupled with wastewater treatment, the model was expanded to include three different municipal wastewater effluents as sources of nitrogen and phosphorus. Each provided a significant reduction in the burdens of algae cultivation, and the use of source-separated urine was found to make algae more environmentally beneficial than the terrestrial crops.

  1. Electro-coagulation-flotation process for algae removal.

    PubMed

    Gao, Shanshan; Yang, Jixian; Tian, Jiayu; Ma, Fang; Tu, Gang; Du, Maoan

    2010-05-15

    Algae in surface water have been a long-term issue all over the world, due to their adverse influence on drinking water treatment process as well as drinking water quality. The algae removal by electro-coagulation-flotation (ECF) technology was investigated in this paper. The results indicated that aluminum was an excellent electrode material for algae removal as compared with iron. The optimal parameters determined were: current density=1 mA/cm(2), pH=4-7, water temperature=18-36 degrees C, algae density=0.55 x 10(9)-1.55 x 10(9) cells/L. Under the optimal conditions, 100% of algae removal was achieved with the energy consumption as low as 0.4 kWh/m(3). The ECF performed well in acid and neutral conditions. At low initial pH of 4-7, the cell density of algae was effectively removed in the ECF, mainly through the charge neutralization mechanism; while the algae removal worsened when the pH increased (7-10), and the main mechanism shifted to sweeping flocculation and enmeshment. The mechanisms for algae removal at different pH were also confirmed by atomic force microscopy (AFM) analysis. Furthermore, initial cell density and water temperature could also influence the algae removal. Overall, the results indicated that the ECF technology was effective for algae removal, from both the technical and economical points of view.

  2. Functional properties of carotenoids originating from algae.

    PubMed

    Christaki, Efterpi; Bonos, Eleftherios; Giannenas, Ilias; Florou-Paneri, Panagiota

    2013-01-15

    Carotenoids are isoprenoid molecules which are synthesised de novo by photosynthetic plants, fungi and algae and are responsible for the orange, yellow and some red colours of various fruits and vegetables. Carotenoids are lipophilic compounds, some of which act as provitamins A. These compounds can be divided into xanthophylls and carotenes. Many macroalgae and microalgae are rich in carotenoids, where these compounds aid in the absorption of sunlight. Industrially, these carotenoids are used as food pigments (in dairy products, beverages, etc.), as feed additives, in cosmetics and in pharmaceuticals, especially nowadays when there is an increasing demand by consumers for natural products. Production of carotenoids from algae has many advantages compared to other sources; for example, their production is cheap, easy and environmentally friendly; their extraction is easier, with higher yields, and there is no lack of raw materials or limited seasonal variation. Recently, there has been considerable interest in dietary carotenoids with respect to their antioxidant properties and their ability to reduce the incidence of some chronic diseases where free radicals are involved. Possibly, carotenoids protect cells from oxidative stress by quenching singlet oxygen damage with various mechanisms. Therefore, carotenoids derived from algae could be a leading natural resource in the research for potential functional ingredients. Copyright © 2012 Society of Chemical Industry.

  3. Cytoplasmic inheritance of organelles in brown algae.

    PubMed

    Motomura, Taizo; Nagasato, Chikako; Kimura, Kei

    2010-03-01

    Brown algae, together with diatoms and chrysophytes, are a member of the heterokonts. They have either a characteristic life cycle of diplohaplontic alternation of gametophytic and sporophytic generations that are isomorphic or heteromorphic, or a diplontic life cycle. Isogamy, anisogamy and oogamy have been recognized as the mode of sexual reproduction. Brown algae are the characteristic group having elaborated multicellular organization within the heterokonts. In this study, cytoplasmic inheritance of chloroplasts, mitochondria and centrioles was examined, with special focus on sexual reproduction and subsequent zygote development. In oogamy, chloroplasts and mitochondria are inherited maternally. In isogamy, chloroplasts in sporophyte cells are inherited biparentally (maternal or paternal); however, mitochondria (or mitochondrial DNA) derived from the female gamete only remained during zygote development after fertilization. Centrioles in zygotes are definitely derived from the male gamete, irrespective of the sexual reproduction pattern. Female centrioles in zygotes are selectively broken down within 1-2 h after fertilization. The remaining male centrioles play a crucial role as a part of the centrosome for microtubule organization, mitosis, determination of the cytokinetic plane and cytokinesis, as well as for maintaining multicellularity and regular morphogenesis in brown algae.

  4. New records of marine algae in Vietnam

    NASA Astrophysics Data System (ADS)

    Le Hau, Nhu; Ly, Bui Minh; Van Huynh, Tran; Trung, Vo Thanh

    2015-06-01

    In May, 2013, a scientific expedition was organized by the Vietnam Academy of Science and Technology (VAST) and the Far Eastern Branch of the Russian Academy of Sciences (FEBRAS) through the frame of the VAST-FEBRAS International Collaboration Program. The expedition went along the coast of Vietnam from Quang Ninh to Kien Giang. The objective was to collect natural resources to investigate the biological and biochemical diversity of the territorial waters of Vietnam. Among the collected algae, six taxa are new records for the Vietnam algal flora. They are the red algae Titanophora pikeana (Dickie) Feldmann from Cu Lao Xanh Island, Laurencia natalensis Kylin from Tho Chu Island, Coelothrix irregularis (Harvey) Børgesen from Con Dao Island, the green algae Caulerpa oligophylla Montagne, Caulerpa andamanensis (W.R. Taylor) Draisma, Prudhomme et Sauvage from Phu Quy Island, and Caulerpa falcifolia Harvey & Bailey from Ly Son Island. The seaweed flora of Vietnam now counts 833 marine algal taxa, including 415 Rhodophyta, 147 Phaeophyceae, 183 Chlorophyta, and 88 Cyanobacteria.

  5. Antibody Production in Plants and Green Algae.

    PubMed

    Yusibov, Vidadi; Kushnir, Natasha; Streatfield, Stephen J

    2016-04-29

    Monoclonal antibodies (mAbs) have a wide range of modern applications, including research, diagnostic, therapeutic, and industrial uses. Market demand for mAbs is high and continues to grow. Although mammalian systems, which currently dominate the biomanufacturing industry, produce effective and safe recombinant mAbs, they have a limited manufacturing capacity and high costs. Bacteria, yeast, and insect cell systems are highly scalable and cost effective but vary in their ability to produce appropriate posttranslationally modified mAbs. Plants and green algae are emerging as promising production platforms because of their time and cost efficiencies, scalability, lack of mammalian pathogens, and eukaryotic posttranslational protein modification machinery. So far, plant- and algae-derived mAbs have been produced predominantly as candidate therapeutics for infectious diseases and cancer. These candidates have been extensively evaluated in animal models, and some have shown efficacy in clinical trials. Here, we review ongoing efforts to advance the production of mAbs in plants and algae.

  6. Deoxyribonucleotide biosynthesis in synchronous algae cells.

    PubMed

    Feller, W; Schimpff-Weiland, G; Follmann, H

    1980-09-01

    Synchronous cells of the green alga, Scenedesmus obliquus, cultured in a 14-h/10-h light/dark regime, contain a peak of ribonucleoside-diphosphate reductase activity and maximum deoxyribonucleoside 5'-triphosphate concentrations at the 12th hour of the cell cycle, coinciding with DNA synthesis and preceding the formation of eight daughter cells. The intracellular dTTP pool reaches 4.5 pmol and the other pools 2-3 pmol/10(6) cells. Algal reductase activity is sensitive to cycloheximide, but not to lincomycin. These correlations demonstrate the functioning of the NDP leads to dNDP leads to dNTP pathway of DNA precursor biosynthesis in plant cells. In the presence of 20 micrograms 5-fluorodeoxyuridine/ml, an inhibitor of thymidylate synthesis, the dTTP pool is rapidly depleted and DNA synthesis ceases. 5-Fluorouracil and methotrexate produce similar effects. At the same time the ribonucleotide reductase activity and also the dATP pool are greatly increased, especially when fluorodeoxyuridine treatment is combined with continued illumination of the algae. In contrast, arabinosylcytosine, an inhibitor of DNA replication, has no effect on ribonucleotide reduction. The control of de novo enzyme synthesis in the eucaryotic algae therefore appears to depend on the presence of dTTP (or a related nucleotide), but not directly coupled to DNA synthesis. This interdependence resembles the situation observed in HeLa cells, while it may differ in detail from control mechanisms of ribonucleotide reductase studied in bacteria.

  7. Screening for bioactive compounds from algae.

    PubMed

    Plaza, M; Santoyo, S; Jaime, L; García-Blairsy Reina, G; Herrero, M; Señoráns, F J; Ibáñez, E

    2010-01-20

    In the present work, a comprehensive methodology to carry out the screening for novel natural functional compounds is presented. To do that, a new strategy has been developed including the use of unexplored natural sources (i.e., algae and microalgae) together with environmentally clean extraction techniques and advanced analytical tools. The developed procedure allows also estimating the functional activities of the different extracts obtained and even more important, to correlate these activities with their particular chemical composition. By applying this methodology it has been possible to carry out the screening for bioactive compounds in the algae Himanthalia elongata and the microalgae Synechocystis sp. Both algae produced active extracts in terms of both antioxidant and antimicrobial activity. The obtained pressurized liquid extracts were chemically characterized by GC-MS and HPLC-DAD. Different fatty acids and volatile compounds with antimicrobial activity were identified, such as phytol, fucosterol, neophytadiene or palmitic, palmitoleic and oleic acids. Based on the results obtained, ethanol was selected as the most appropriate solvent to extract this kind of compounds from the natural sources studied.

  8. Regulating cellular trace metal economy in algae

    DOE PAGES

    Blaby-Haas, Crysten E.; Merchant, Sabeeha S.

    2017-06-30

    As indispensable protein cofactors, Fe, Mn, Cu and Zn are at the center of multifaceted acclimation mechanisms that have evolved to ensure extracellular supply meets intracellular demand. In starting with selective transport at the plasma membrane and ending in protein metalation, metal homeostasis in algae involves regulated trafficking of metal ions across membranes, intracellular compartmentalization by proteins and organelles, and metal-sparing/recycling mechanisms to optimize metal-use efficiency. Overlaid on these processes are additional circuits that respond to the metabolic state as well as to the prior metal status of the cell. Here, we focus on recent progress made toward understanding themore » pathways by which the single-celled, green alga Chlamydomonas reinhardtii controls its cellular trace metal economy. We also compare these mechanisms to characterized and putative processes in other algal lineages. Photosynthetic microbes continue to provide insight into cellular regulation and handling of Cu, Fe, Zn and Mn as a function of the nutritional supply and cellular demand for metal cofactors. We found that new experimental tools such as RNA-Seq and subcellular metal imaging are bringing us closer to a molecular understanding of acclimation to supply dynamics in algae and beyond.« less

  9. Regulating cellular trace metal economy in algae.

    PubMed

    Blaby-Haas, Crysten E; Merchant, Sabeeha S

    2017-10-01

    As indispensable protein cofactors, Fe, Mn, Cu and Zn are at the center of multifaceted acclimation mechanisms that have evolved to ensure extracellular supply meets intracellular demand. Starting with selective transport at the plasma membrane and ending in protein metalation, metal homeostasis in algae involves regulated trafficking of metal ions across membranes, intracellular compartmentalization by proteins and organelles, and metal-sparing/recycling mechanisms to optimize metal-use efficiency. Overlaid on these processes are additional circuits that respond to the metabolic state as well as to the prior metal status of the cell. In this review, we focus on recent progress made toward understanding the pathways by which the single-celled, green alga Chlamydomonas reinhardtii controls its cellular trace metal economy. We also compare these mechanisms to characterized and putative processes in other algal lineages. Photosynthetic microbes continue to provide insight into cellular regulation and handling of Cu, Fe, Zn and Mn as a function of the nutritional supply and cellular demand for metal cofactors. New experimental tools such as RNA-Seq and subcellular metal imaging are bringing us closer to a molecular understanding of acclimation to supply dynamics in algae and beyond. Copyright © 2017 Elsevier Ltd. All rights reserved.

  10. [Pharmacology and toxicology of Spirulina alga].

    PubMed

    Chamorro, G; Salazar, M; Favila, L; Bourges, H

    1996-01-01

    Spirulina, a unicellular filamentous blue-green alga has been consumed by man since ancient times in Mexico and central Africa. It is currently grown in many countries by synthetic methods. Initially the interest in Spirulina was on its nutritive value: it was found almost equal to other plant proteins. More recently, some preclinical testing suggests it has several therapeutic properties such as hypocholesterolemic, immunological, antiviral and antimutagenic. This has led to more detailed evaluations such as nucleic acid content and presence of toxic metals, biogenic toxins and organic chemicals: they have shown absence or presence at tolerable levels according to the recommendations of international regulatory agencies. In animal experiments for acute, subchronic and chronic toxicity, reproduction, mutagenicity, and teratogenicity the algae did not cause body or organ toxicity. In all instances, the Spirulina administered to the animals were at much higher amounts than those expected for human consumption. On the other hand there is scant information of the effects of the algae in humans. This area needs more research.

  11. Performance and economics of the PV hybrid power system at Dangling Rope Marina, Utah

    NASA Astrophysics Data System (ADS)

    Rosenthal, Andrew L.

    1999-03-01

    The National Park Service has operated a large photovoltaic (PV) hybrid power system at the Dangling Rope Marina since August 1996. Performance and economic analyses for this system based on its first year of operation have been published elsewhere [1,2]. Now, as the system enters its third year of operation, recent changes to the site electrical load and impending additions to the PV array raise new interest in this site as the subject of analysis and evaluation. In 1998, energy conservation measures reduced the site electrical load by 10-12%. At the same time, funding has been allocated to expand the PV array by 40% in 1999. This paper analyzes the effects that these changes will have on the site's fuel use and 20-year life cycle cost.

  12. Proteomic profile of Ortleppascaris sp.: A helminth parasite of Rhinella marina in the Amazonian region.

    PubMed

    E Silva, Jefferson Pereira; Furtado, Adriano Penha; Dos Santos, Jeannie Nascimento

    2014-08-01

    Ortleppascaris sp. is a helminth that, in its larval stage, infects the liver parenchyma of the amphibian Rhinella marina, resulting in severe physiological and pathological changes. This study used a proteomic approach to determine the overall profile of proteins expressed in a somatic extract from the nematodes to investigate the relationship between the parasite and its host. A total of 60 abundant proteins were selected from the two-dimensional electrophoresis, identified by peptide mass fingerprinting, and grouped based on their Gene Ontology by the biological processes in which they are potentially involved. Important helminthic derivatives, such as the immunoreactive As37 antigen, guanylyl cyclases, proteolytic enzymes, and other proteins conserved among different parasites, were identified through homology. This study represents a new approach to helminth-related proteomic studies using an amphibian animal model. Furthermore, this study identified protein markers that are important to the host-parasite relationship and the viability, development, infectivity, and virulence of helminths.

  13. Proteomic profile of Ortleppascaris sp.: A helminth parasite of Rhinella marina in the Amazonian region

    PubMed Central

    e Silva, Jefferson Pereira; Furtado, Adriano Penha; dos Santos, Jeannie Nascimento

    2014-01-01

    Ortleppascaris sp. is a helminth that, in its larval stage, infects the liver parenchyma of the amphibian Rhinella marina, resulting in severe physiological and pathological changes. This study used a proteomic approach to determine the overall profile of proteins expressed in a somatic extract from the nematodes to investigate the relationship between the parasite and its host. A total of 60 abundant proteins were selected from the two-dimensional electrophoresis, identified by peptide mass fingerprinting, and grouped based on their Gene Ontology by the biological processes in which they are potentially involved. Important helminthic derivatives, such as the immunoreactive As37 antigen, guanylyl cyclases, proteolytic enzymes, and other proteins conserved among different parasites, were identified through homology. This study represents a new approach to helminth-related proteomic studies using an amphibian animal model. Furthermore, this study identified protein markers that are important to the host–parasite relationship and the viability, development, infectivity, and virulence of helminths. PMID:25161903

  14. Release and Consumption of DMSP from Emiliania Huxleyi during grazing by Oxyrrhis Marina

    NASA Technical Reports Server (NTRS)

    Wolfe, Gordon V.; Sherr, Evelyn B.; Sherr, Barry F.

    1994-01-01

    Degradation and release to solution of intracellular dimethylsulfoniopropionate (DMSP) from Emiliania huxleyi 370 was observed during grazing by the heterotrophic dinoflagellate Oxyrrhis marina in 24 h bottle incubations. Between 30 and 70% of the lost algal DMSP was metabolized by the grazers without production of dimethylsulfide (DMS) when grazer densities were 150 to 450/ml. The rest was released to solution and about 30% was converted to DMS by bacteria associated with the grazer culture. These experiments demonstrate that grazing by herbivorous protists may be an important sink for DMSP in marine waters, removing a potential source of DMS. Microzooplankton grazing may also indirectly increase the production of DMS by transferring algal DMSP to the dissolved pool, making it available for bacterial metabolism.

  15. Kocuria marina BS-15 a biosurfactant producing halophilic bacteria isolated from solar salt works in India

    PubMed Central

    Sarafin, Yesurethinam; Donio, Mariathasan Birdilla Selva; Velmurugan, Subramanian; Michaelbabu, Mariavincent; Citarasu, Thavasimuthu

    2014-01-01

    Biosurfactant screening was made among the eight halophilic bacterial genera isolated from Kovalam solar salt works in Kanyakumari of India. After initial screening, Kocuria sp. (Km), Kurthia sp. (Ku) and Halococcus sp. (Hc) were found to have positive biosurfactant activity. Biosurfactant derived from Kocuria sp. emulsified more than 50% of the crude oil, coconut oil, sunflower oil, olive oil and kerosene when compared to the other strains. Further, Kocuria marina BS-15 derived biosurfactant was purified and characterized by TLC, FTIR and GC–MS analysis. The TLC analysis revealed that, the purified biosurfactants belong to the lipopeptide group. The IR spectrum results revealed that functional groups are R2C 000000000000 000000000000 000000000000 111111111111 000000000000 111111111111 000000000000 000000000000 000000000000 NN, alkenes and N–H. The GC–MS analysis confirmed the compound as Nonanoic acid and Cyclopropane with the retention time of 12.78 and 24.65, respectively. PMID:25473358

  16. Sediment accumulation and mercury (Hg) flux in Avicennia marina forest of Deep Bay, China

    NASA Astrophysics Data System (ADS)

    Li, Ruili; Chai, Minwei; Guo, Meixian; Qiu, Guo Yu

    2016-08-01

    To investigate the rate of sediment accumulation and mercury (Hg) flux in Avicennia marina forest of Deep Bay, China, sediment cores were analyzed. The results showed that Hg concentrations were much higher at all depths compared to the background level. A high correlation between Hg and total organic carbon (TOC) indicated their similar anthropogenic origin. Sedimentation rate was estimated to be 1.38 cm a-1 by 210Pb geochronology. The increase in the mass sediment accumulation rates was rapid (range: 0.5-0.94 g cm-2 a-1), and the Hg fluxes ranged between 76 and 116 ng cm-2 a-1 during the last three decades. The reduction in both Hg concentrations and flux during the last decade may be due to the adoption of contamination control policies. Our results support the notion that the Hg fluxes determined from the sediment cores reveal the effects of anthropogenic influences from the areas around Deep Bay.

  17. Photovoltaic DER System Could Save USPS $25,000 per Year in Marina del Rey, California

    SciTech Connect

    Not Available

    2002-11-01

    In numerous projects, government agencies are demonstrating the economic and environmental value of using distributed energy resources (DER) to provide reliable electricity for Federal facilities. These projects also show how renewable DER systems such as photovoltaics (PV) can be effectively integrated into utility power grids to provide added power during peak demand periods in populous regions and states. This four-page case study describes a recent project in which the United States Postal Service (USPS) worked with the U.S. Department of Energy (DOE) Federal Energy Management Program (FEMP), a national laboratory, the local utility, and a private company to install a PV DER system at the USPS Marina Processing and Distribution Center in Inglewood, California. This system is expected to shave 10% off the facility's 1.2-megawatt peak power demand and save more $25,000 per year in utility costs.

  18. Pyrosequencing-Based Seasonal Observation of Prokaryotic Diversity in Pneumatophore-Associated Soil of Avicennia marina.

    PubMed

    Sanka Loganathachetti, Dinesh; Sadaiappan, Balamurugan; Poosakkannu, Anbu; Muthuraman, Sundararaman

    2016-01-01

    Pneumatophores are aerial roots developing from the main roots of mangrove plants away from the gravity. The below ground pneumatophore-associated soil prokaryotic community of Avicennia marina was studied by amplicon pyrosequencing (39,378 reads) during monsoon and summer seasons. Apart from the most dominant phylum Proteobacteria in both seasons, the second most were Acidobacteria (summer) and Cyanobacteria/Chloroplast (monsoon). Similarly, Acidobacteria_Gp10 and Cyanobacteria were the second most abundant at class level during summer and monsoon, respectively. Archaeal phylum Thaumarchaeota was the most abundant followed by Crenarchaeota and Euryarchaeota. The classes detected in our study were Thermoprotei, Halobacteria, and Methanomicrobia. The highest richness and diversity were observed during summer for bacteria, whereas the same phenomena for archaea in monsoon at 97% sequence similarity. To the best of our knowledge, this is the first attempt to catalog the prokaryotic diversity of pnueumatophore-associated soil.

  19. Experimental assessment of critical anthropogenic sediment burial in eelgrass Zostera marina.

    PubMed

    Munkes, Britta; Schubert, Philipp R; Karez, Rolf; Reusch, Thorsten B H

    2015-11-15

    Seagrass meadows, one of the world's most important and productive coastal habitats, are threatened by a range of anthropogenic actions. Burial of seagrass plants due to coastal activities is one important anthropogenic pressure leading to the decline of local populations. In our study, we assessed the response of eelgrass Zostera marina to sediment burial from physiological, morphological, and population parameters. In a full factorial field experiment, burial level (5-20cm) and burial duration (4-16weeks) were manipulated. Negative effects were visible even at the lowest burial level (5cm) and shortest duration (4weeks), with increasing effects over time and burial level. Buried seagrasses showed higher shoot mortality, delayed growth and flowering and lower carbohydrate storage. The observed effects will likely have an impact on next year's survival of buried plants. Our results have implications for the management of this important coastal plant.

  20. The marine bacteria Cobetia marina DSMZ 4741 synthesizes an unexpected K-antigen-like exopolysaccharide.

    PubMed

    Lelchat, Florian; Cérantola, Stéphane; Brandily, Christophe; Colliec-Jouault, Sylvia; Baudoux, Anne-Claire; Ojima, Takao; Boisset, Claire

    2015-06-25

    We have studied the exopolysaccharide produced by Cobetia marina DSMZ 4741, a marine bacterium isolated from coastal seawater. This strain is able to produce a polysaccharide in presence of carbon sources as glucose, mannitol and alginate. The maximum production occurs in aerobic condition, during the end of the exponential phase. The polymer is a non-viscous, acidic heteropolysaccharide of 270kDa constituted of a repeating unit of: This kind of chemical structure is generally related to K-antigen polysaccharide of pathogenic Escherichia coli strains. This is the first time this type of EPS is described from a marine bacterium. Moreover the polysaccharide exhibits a pyruvate substitution on its 3-deoxy-d-manno-oct-2-ulosonic acid (KDO) residue never encountered before. The discovery of such an unexpected EPS with high biotechnological potential is a new incentive for a better exploration of bioactive marine resources.

  1. Screening of antifouling biocides around a pleasure boat marina in the Baltic Sea after legal restrictions.

    PubMed

    Kylin, Henrik; Haglund, Kurt

    2010-10-01

    Copper, zinc, and Irgarol 1051 concentrations were determined around a pleasure boat marina in the Stockholm Archipelago. Copper concentrations in water were twice as high (6.62 μg L⁻¹) in 2004 as 1992-1993, zinc concentrations six times higher (20.0 μg L⁻¹). Concentrations in bladder wrack (Fucus vesiculosus) had also risen. Irgarol concentrations in water were similar (~0.17 μg L⁻¹) in 1996 and 2004, while concentrations in bladder wrack halved from 1993 to 2004. The peak concentrations of copper and Irgarol in water have shifted indicating that the main source in the 1990 s were local boats, but in 2004 visiting boats.

  2. Benthic assemblages, biodiversity and invasiveness in marinas and commercial harbours: an investigation using a bioindicator group.

    PubMed

    Megina, Cesar; González-Duarte, Manuel M; López-González, Pablo J

    2016-01-01

    Fouling communities on artificial marine structures are generally different from benthic communities in natural rocky habitats. However, they may also differ among different types of artificial structures. Two artificial structures in direct contact with arriving vessels were compared: floating pontoons within recreational marinas, and sea-walls within commercial harbours. Natural rocky habitats were used as a reference, and the genus Eudendrium (Cnidaria, Hydrozoa) was chosen as a bioindicator. The assemblages were different among the three types of habitat studied, with different species characterising each habitat. The probability of finding an invasive Eudendrium species was significantly higher on pontoons. Diversity was the lowest on pontoons, but it was not significantly different between sea-walls and natural rocks. In general, a barrier to the spread of exotic species exists between harbours and natural rocky habitats. Floating pontoons seem to be a less suitable habitat for native fauna and a key element in marine biological invasions.

  3. Performance and economics of the PV hybrid power system at Dangling Rope Marina, Utah

    SciTech Connect

    Rosenthal, A.L.

    1999-03-01

    The National Park Service has operated a large photovoltaic (PV) hybrid power system at the Dangling Rope Marina since August 1996. Performance and economic analyses for this system based on its first year of operation have been published elsewhere [1,2]. Now, as the system enters its third year of operation, recent changes to the site electrical load and impending additions to the PV array raise new interest in this site as the subject of analysis and evaluation. In 1998, energy conservation measures reduced the site electrical load by 10{endash}12{percent}. At the same time, funding has been allocated to expand the PV array by 40{percent} in 1999. This paper analyzes the effects that these changes will have on the site{close_quote}s fuel use and 20-year life cycle cost. {copyright} {ital 1999 American Institute of Physics.}

  4. Exploiting intraspecific competitive mechanisms to control invasive cane toads (Rhinella marina)

    PubMed Central

    Crossland, Michael R.; Haramura, Takashi; Salim, Angela A.; Capon, Robert J.; Shine, Richard

    2012-01-01

    If invasive species use chemical weapons to suppress the viability of conspecifics, we may be able to exploit those species-specific chemical cues for selective control of the invader. Cane toads (Rhinella marina) are spreading through tropical Australia, with negative effects on native species. The tadpoles of cane toads eliminate intraspecific competitors by locating and consuming newly laid eggs. Our laboratory trials show that tadpoles find those eggs by searching for the powerful bufadienolide toxins (especially, bufogenins) that toads use to deter predators. Using those toxins as bait, funnel-traps placed in natural waterbodies achieved near-complete eradication of cane toad tadpoles with minimal collateral damage (because most native (non-target) species are repelled by the toads' toxins). More generally, communication systems that have evolved for intraspecific conflict provide novel opportunities for invasive-species control. PMID:22696528

  5. Cerium Binding Activity of Pectins Isolated from the Seagrasses Zostera marina and Phyllospadix iwatensis

    PubMed Central

    Khotimchenko, Yuri; Khozhaenko, Elena; Kovalev, Valeri; Khotimchenko, Maxim

    2012-01-01

    Cerium binding activity of three different water soluble pectin compounds of different origin was studied in a batch sorption system. The Langmuir, Freundlich and BET sorption models were adopted to describe the binding reactions between metal ions and pectin molecules. The Langmuir model provided the best fit. Within the pH range from 4.0 to 6.0, the largest amount of the cerium ions was bound by pectin isolated from the seagrass Phylospadix iwatensis in comparison to pectin extracted from the seagrass Zostera marina and pectin obtained from citrus peel (commercial grade). The Langmuir constants were also highest for the pectin samples isolated from the seagrass P. iwatensis. The results obtained from this study suggest that pectin is a prospective source for the development of radioisotope-removing pharmaceuticals. PMID:22690146

  6. Invader immunology: invasion history alters immune system function in cane toads (Rhinella marina) in tropical Australia.

    PubMed

    Brown, Gregory P; Phillips, Benjamin L; Dubey, Sylvain; Shine, Richard

    2015-01-01

    Because an individual's investment into the immune system may modify its dispersal rate, immune function may evolve rapidly in an invader. We collected cane toads (Rhinella marina) from sites spanning their 75-year invasion history in Australia, bred them, and raised their progeny in standard conditions. Evolved shifts in immune function should manifest as differences in immune responses among the progeny of parents collected in different locations. Parental location did not affect the offspring's cell-mediated immune response or stress response, but blood from the offspring of invasion-front toads had more neutrophils, and was more effective at phagocytosis and killing bacteria. These latter measures of immune function are negatively correlated with rate of dispersal in free-ranging toads. Our results suggest that the invasion of tropical Australia by cane toads has resulted in rapid genetically based compensatory shifts in the aspects of immune responses that are most compromised by the rigours of long-distance dispersal.

  7. Distribution and characteristics of marine litter on the Marina beach, Chennai, India

    NASA Astrophysics Data System (ADS)

    Dhanapal, R.

    2013-05-01

    The types, quantities, and distribution of marine litter found on the beach of the Marina, Chennai, India were surveyed during 2010-2011 season wise. Litter items were sorted into material and usage categories. The counts and weights of the litter were counted and measured. The plastic-type litter (63.4 kg) is the most dominant material category followed by polythene (10.6 kg), metal (5.3 kg) and glass (15.2 kg). Cloth (66.0 kg) is the dominant usage category followed by rubber (45.7 kg) and wood (70.0 kg). Based on the typological results three dominant litter sources were identified viz., land-based, vessel-based and fishery-based sources. t test help recognize dominant litter sources.t; t;

  8. Characterisation of Major Histocompatibility Complex Class I in the Australian Cane Toad, Rhinella marina

    PubMed Central

    Lillie, Mette; Shine, Richard; Belov, Katherine

    2014-01-01

    The Major Histocompatibility Complex (MHC) class I is a highly variable gene family that encodes cell-surface receptors vital for recognition of intracellular pathogens and initiation of immune responses. The MHC class I has yet to be characterised in bufonid toads (Order: Anura; Suborder: Neobatrachia; Family: Bufonidae), a large and diverse family of anurans. Here we describe the characterisation of a classical MHC class I gene in the Australian cane toad, Rhinella marina. From 25 individuals sampled from the Australian population, we found only 3 alleles at this classical class I locus. We also found large number of class I alpha 1 alleles, implying an expansion of class I loci in this species. The low classical class I genetic diversity is likely the result of repeated bottleneck events, which arose as a result of the cane toad's complex history of introductions as a biocontrol agent and its subsequent invasion across Australia. PMID:25093458

  9. Size matters: insights from an allometric approach to evaluate control methods for invasive Australian Rhinella marina.

    PubMed

    Beaty, Lynne E; Salice, Christopher J

    2013-10-01

    Invasive species are costly and difficult to control. In order to gain a mechanistic understanding of potential control measures, individual-based models uniquely parameterized to reflect the salient life-history characteristics of invasive species are useful. Using invasive Australian Rhinella marina as a case study, we constructed a cohort- and individual-based population simulation that incorporates growth and body size of terrestrial stages. We used this allometric approach to examine the efficacy of nontraditional control methods (i.e., tadpole alarm chemicals and native meat ants) that may have indirect effects on population dynamics mediated by effects on body size. We compared population estimates resulting from these control methods with traditional hand removal. We also conducted a sensitivity analysis to investigate the effect that model parameters, specifically those associated with growth and body size, had on adult population estimates. Incremental increases in hand removal of adults and juveniles caused nonlinear decreases in adult population estimates, suggesting less return with increased investment in hand-removal efforts. Applying tadpole alarm chemicals or meat ants decreased adult population estimates on the same level as removing 15-25% of adults and juveniles by hand. The combined application of tadpole alarm chemicals and meat ants resulted in approximately 80% decrease in adult abundance, the largest of any applied control method. In further support of the nontraditional control methods, which greatly affected the metamorph stage, our model was most sensitive to changes in metamorph survival, juvenile survival, metamorph growth rate, and adult survival. Our results highlight the use and insights that can be gained from individual-based models that incorporate growth and body size and the potential success that nontraditional control methods could have in controlling established, invasive Rhinella marina populations.

  10. Mortality rate estimation for eelgrass Zostera marina (Potamogetonaceae) using projections from Leslie matrices.

    PubMed

    Flores Uzeta, Olga; Solana Arellano, Elena; Echavarría Heras, Héctor

    2008-09-01

    The main goal of this study is to provide estimations of mean mortality rate of vegetative shoots of the seagrass Zostera marina in a meadow near Ensenada Baja California, using a technique that minimizes destructive sampling. Using cohorts and Leslie matrices, three life tables were constructed, each representing a season within the period of monthly sampling (April 1999 to April 2000). Ages for the cohorts were established in terms of Plastochrone Interval (PI). The matrices were projected through time to estimate the mean total number of individuals at time t, n(t) as well as mortality. We found no statistical differences between observed and predicted mean values for these variables (t = -0.11, p = 0.92 for n(t) and t = 0.69, p = 0.5 for mean rate of mortality). We found high correlation coefficient values between observed and projected values for monthly number of individuals (r = 0.70, p = 0.007) and monthly mortality rates (r = 0.81, p = 0.001). If at a certain time t a sudden environmental change occurs, and as long as the perturbation does not provoke the killing of all the individuals of a given age i for 0 < or = i < or = x - 1, there will be a prevailing number of individuals of age or stage x at a time t+1. This nondestructive technique reduces the number of field visits and samples needed for the demographic analysis of Z. marina, and therefore decreases the disturbance caused by researches to the ecosystem.

  11. Photoacclimatory Responses of Zostera marina in the Intertidal and Subtidal Zones

    PubMed Central

    Park, Sang Rul; Kim, Sangil; Kim, Young Kyun; Kang, Chang-Keun; Lee, Kun-Seop

    2016-01-01

    Photoacclimatory responses of the seagrass Zostera marina in the intertidal and subtidal zones were investigated by measuring chlorophyll a fluorescence parameters, photosynthetic pigments, leaf δ13C values, and shoot morphology in two bay systems. Intertidal plants had higher carotenoid concentrations than subtidal plants to avoid photodamage under excess light conditions during the day. The maximum relative electron transport rate (rETRmax) and minimum saturation irradiance (Ek) of the intertidal plants were higher than those of the subtidal plants, whereas photosynthetic efficiency (α) and maximum quantum yield (Fv/Fm) were higher in subtidal plants. The intertidal plants also had significantly greater Stern–Volmer non-photochemical quenching (NPQ) than that of the subtidal plants. These results suggest that the subtidal plants photoacclimated to use limited light more efficiently, and the intertidal plants exhibited photosynthetic responses to minimize photodamage at excess irradiance. The δ13C values of leaf tissues were more negative in the intertidal plants than those in the subtidal plants, suggesting that the intertidal plants used atmospheric or dissolved CO2 for photosynthesis during emersion. Effective quantum yield (ΔF/Fm´) in the intertidal plants decreased more slowly after emersion than that in the subtidal plants, indicating higher desiccation tolerance of the intertidal plants. The intertidal plants also recovered more rapidly from desiccation damage than the subtidal plants, suggesting photosynthetic adaptation to desiccation stress. The photosynthetic plasticity of Z. marina in response to variable environmental conditions most likely allows this species to occur in the intertidal and subtidal zones. PMID:27227327

  12. Antibacterial potential of biosynthesised silver nanoparticles using Avicennia marina mangrove plant

    NASA Astrophysics Data System (ADS)

    Gnanadesigan, M.; Anand, M.; Ravikumar, S.; Maruthupandy, M.; Syed Ali, M.; Vijayakumar, V.; Kumaraguru, A. K.

    2012-06-01

    The present study was aimed to identify the antibacterial potential of biosynthesised silver nanoparticles using different plant parts (leaves, bark and root) of Avicenna marina mangrove plant. Of the selected three different parts, the leaf extract showed the maximum synthesis of silver nanoparticles. The in vitro antibacterial assay (100 μg disk-1 concentration) showed the results of maximum zone of inhibition with the E. coli (18.40 ± 0.97 mm), and minimum (10.87 ± 1.33 mm) zone of inhibition with S. aureus but the concentrations of MIC and MBC values ranged between 6.25 and 50.0 μg ml-1 between the selected bacterial strains. The FTIR results of most potent leaf extract-synthesized silver nanoparticles showed the prominent peaks (620.967; 1,061.02; 1,116.58; 1,187.94; 1,280.50; 1,353.79; 1,384.64; 1,598.50; 1,629.56; 2,854.14 and 2,927.42) in different ranges. Further, the results of XRD analysis showed the 2 θ intense values (38.11 and 70.57) within the ranges of Bragg's reflection. In addition, the AFM analysis showed the results of particle sizes (71-110 nm), particle roughness (11.8 nm), maximum height of the particle roughness (111.8 nm), and average maximum height of the particle roughness (57.5 nm). It can be concluded from the present findings that, the biosynthesis of silver nanoparticles from the leaf extract of A. marina can be used as potential antibacterial agents.

  13. Occurrence, fate, and fluxes of perfluorochemicals (PFCs) in an urban catchment: Marina Reservoir, Singapore.

    PubMed

    Nguyen, Viet Tung; Gin, Karina Yew-Hoong; Reinhard, Martin; Liu, Changhui

    2012-01-01

    A study was carried out to characterize the occurrence, sources and sinks of perfluorochemicals (PFCs) in the Marina Catchment and Reservoir, Singapore. Salinity depth profiles indicated the reservoir was stratified with lower layers consisting of sea water (salinity ranging from 32 to 35 g L(-1)) and a brackish surface layer containing approximately 14-65% seawater. The PFC mixture detected in catchment waters contained perfluoroalkyl carboxylates (PFCAs), particularly perfluorooctanoate (PFOA), perfluorohexanoate (PFHpA), perfluorooctane sulfonate (PFOS) and PFC transformation products. PFC concentrations in storm runoff were generally higher than those in dry weather flow of canals and rivers. PFC concentration profiles measured during storm events indicated 'first flush' behavior, probably because storm water is leaching PFC compounds from non-point sources present in the catchment area. Storm runoff carries high concentrations of suspended solids (SS), which suggests that PFC transport is via SS. In Marina Bay, PFCs are deposited in the sediments along with the SS. In sediments, the total PFC concentration was 4,700 ng kg(-1), approximately 200 times higher than in the bottom water layers. Total perfluoroalkyl sulfonates (PFSAs), particularly PFOS and 6:2 fluoro telomer sulfonate (6:2 FtS) were dominant PFCs in the sediments. PFC sorption by sediments varied with perfluorocarbon chain length, type of functional group and sediment characteristics. A first approximation analysis based on SS transport suggested that the annual PFC input into the reservoir was approximately 35 ± 12 kg y(-1). Contributions of SS, dry weather flow of river/canals, and rainfall were approximately 70, 25 and 5%, respectively. This information will be useful for improving strategies to protect the reservoir from PFC contamination.

  14. DESICCATION INDEX: A MEASURE OF DAMAGE CAUSED BY ADVERSE AERIAL EXPOSURE ON INTERTIDAL EELGRASS (ZOSTERA MARINA) IN AN OREGON (USA) ESTUARY

    EPA Science Inventory

    Eelgrass (Zostera marina) blade necrosis resulting from intertidal aerial exposure is describe. A desiccation index was developed to quantitatively assess this damage. This index was then used to evaluate the extent of desiccation damage across intertidal bathymetric slopes (st...

  15. DESICCATION INDEX: A MEASURE OF DAMAGE CAUSED BY ADVERSE AERIAL EXPOSURE ON INTERTIDAL EELGRASS (ZOSTERA MARINA) IN AN OREGON (USA) ESTUARY

    EPA Science Inventory

    Eelgrass (Zostera marina) blade necrosis resulting from intertidal aerial exposure is describe. A desiccation index was developed to quantitatively assess this damage. This index was then used to evaluate the extent of desiccation damage across intertidal bathymetric slopes (st...

  16. Hydrogenases in green algae: do they save the algae's life and solve our energy problems?

    PubMed

    Happe, Thomas; Hemschemeier, Anja; Winkler, Martin; Kaminski, Annette

    2002-06-01

    Green algae are the only known eukaryotes with both oxygenic photosynthesis and a hydrogen metabolism. Recent physiological and genetic discoveries indicate a close connection between these metabolic pathways. The anaerobically inducible hydA genes of algae encode a special type of highly active [Fe]-hydrogenase. Electrons from reducing equivalents generated during fermentation enter the photosynthetic electron transport chain via the plastoquinone pool. They are transferred to the hydrogenase by photosystem I and ferredoxin. Thus, the [Fe]-hydrogenase is an electron 'valve' that enables the algae to survive under anaerobic conditions. During sulfur deprivation, illuminated algal cultures evolve large quantities of hydrogen gas, and this promises to be an alternative future energy source.

  17. Algae to Economically Viable Low-Carbon-Footprint Oil.

    PubMed

    Bhujade, Ramesh; Chidambaram, Mandan; Kumar, Avnish; Sapre, Ajit

    2017-06-07

    Algal oil as an alternative to fossil fuel has attracted attention since the 1940s, when it was discovered that many microalgae species can produce large amounts of lipids. Economics and energy security were the motivational factors for a spurt in algae research during the 1970s, 1990s, and early 2000s. Whenever crude prices declined, research on algae stopped. The scenario today is different. Even given low and volatile crude prices ($30-$50/barrel), interest in algae continues all over the world. Algae, with their cure-all characteristics, have the potential to provide sustainable solutions to problems in the energy-food-climate nexus. However, after years of effort, there are no signs of algae-to-biofuel technology being commercialized. This article critically reviews past work; summarizes the current status of the technology; and based on the lessons learned, provides a balanced perspective on a potential path toward commercialization of algae-to-oil technology.

  18. Exploring the potential of algae/bacteria interactions.

    PubMed

    Kouzuma, Atsushi; Watanabe, Kazuya

    2015-06-01

    Algae are primary producers in aquatic ecosystems, where heterotrophic bacteria grow on organics produced by algae and recycle nutrients. Ecological studies have identified the co-occurrence of particular species of algae and bacteria, suggesting the presence of their specific interactions. Algae/bacteria interactions are categorized into nutrient exchange, signal transduction and gene transfer. Studies have examined how these interactions shape aquatic communities and influence geochemical cycles in the natural environment. In parallel, efforts have been made to exploit algae for biotechnology processes, such as water treatment and bioenergy production, where bacteria influence algal activities in various ways. We suggest that better understanding of mechanisms underlying algae/bacteria interactions will facilitate the development of more efficient and/or as-yet-unexploited biotechnology processes. Copyright © 2015 Elsevier Ltd. All rights reserved.

  19. Global dynamics of zooplankton and harmful algae in flowing habitats

    NASA Astrophysics Data System (ADS)

    Hsu, Sze-Bi; Wang, Feng-Bin; Zhao, Xiao-Qiang

    This paper is devoted to the study of two advection-dispersion-reaction models arising from the dynamics of harmful algae and zooplankton in flowing-water habitats where a main channel is coupled to a hydraulic storage zone, representing an ensemble of fringing coves on the shoreline. For the system modeling the dynamics of algae and their toxin that contains little limiting nutrient, we establish a threshold type result on the global attractivity in terms of the basic reproduction ratio for algae. For the model with zooplankton that eat the algae and are inhibited by the toxin produced by algae, we show that there exists a coexistence steady state and the zooplankton is uniformly persistent provided that two basic reproduction ratios for algae and zooplankton are greater than unity.

  20. Microplate technique for determining accumulation of metals by algae

    SciTech Connect

    Hassett, J.M.; Jennett, J.C.; Smith, J.E.

    1981-05-01

    A microplate technique was developed to determine the conditions under which pure cultures of algae removed heavy metals from aqueous solutions. Variables investigated included algal species and strain, culture age (11 and 44 days), metal (mercury, lead, cadmium, and zinc), pH, effects of different buffer solutions, and time of exposure. Plastic, U-bottomed microtiter plates were used in conjunction with heavy metal radionuclides to determine concentration factors for metal-alga combinations. The technique developed was rapid, statistically reliable, and economical of materials and cells. All species of algae studied removed mercury from solution. Green algae proved better at accumulating cadmium than did blue-green algae. No alga studied removed zinc, perhaps because cells were maintained in the dark during the labeling period. Chlamydomonas sp. proved superior in ability to remove lead from solution.

  1. Polyphenol-rich Avicennia marina leaf extracts induce apoptosis in human breast and liver cancer cells and in a nude mouse xenograft model.

    PubMed

    Huang, Cheng; Lu, Chung-Kuang; Tu, Ming-Chin; Chang, Jia-Hua; Chen, Yen-Ju; Tu, Yu-Hsuan; Huang, Hsiu-Chen

    2016-06-14

    Avicennia marina is the most abundant and common mangrove species and has been used as a traditional medicine for skin diseases, rheumatism, ulcers, and smallpox. However, its anticancer activities and polyphenol contents remain poorly characterized. Thus, here we investigated anticancer activities of secondary A. marina metabolites that were purified by sequential soxhlet extraction in water, ethanol, methanol, and ethyl acetate (EtOAc). Experiments were performed in three human breast cancer cell lines (AU565, MDA-MB-231, and BT483), two human liver cancer cell lines (HepG2 and Huh7), and one normal cell line (NIH3T3). The chemotherapeutic potential of A. marina extracts was evaluated in a xenograft mouse model. The present data show that EtOAc extracts of A. marina leaves have the highest phenolic and flavonoid contents and anticancer activities and, following column chromatography, the EtOAc fractions F2-5, F3-2-9, and F3-2-10 showed higher cytotoxic effects than the other fractions. 1H-NMR and 13C-NMR profiles indicated that the F3-2-10 fraction contained avicennones D and E. EtOAc extracts of A. marina leaves also suppressed xenograft MDA-MB-231 tumor growth in nude mice, suggesting that EtOAc extracts of A. marina leaves may provide a useful treatment for breast cancer.

  2. Marine Isolates of Trimastix marina Form a Plesiomorphic Deep-branching Lineage within Preaxostyla, Separate from Other Known Trimastigids (Paratrimastix n. gen.).

    PubMed

    Zhang, Qianqian; Táborský, Petr; Silberman, Jeffrey D; Pánek, Tomáš; Čepička, Ivan; Simpson, Alastair G B

    2015-09-01

    Trimastigids are free-living, anaerobic protists that are closely related to the symbiotic oxymonads, forming together the taxon Preaxostyla (Excavata: Metamonada). We isolated fourteen new strains morphologically corresponding to two species assigned to Trimastix (until now the only genus of trimastigids), Trimastix marina and Trimastix pyriformis. Unexpectedly, marine strains of Trimastix marina branch separately from freshwater strains of this morphospecies in SSU rRNA gene trees, and instead form the sister group of all other Preaxostyla. This position is confirmed by three-gene phylogenies. Ultrastructural examination of a marine isolate of Trimastix marina demonstrates a combination of trimastigid-like features (e.g. preaxostyle-like I fibre) and ancestral characters (e.g. absence of thickened flagellar vane margins), consistent with inclusion of marine T. marina within Preaxostyla, but also supporting its distinctiveness from 'freshwater T. marina' and its deep-branching position within Preaxostyla. Since these results indicate paraphyly of Trimastix as currently understood, we transfer the other better-studied trimastigids to Paratrimastix n. gen. and Paratrimastigidae n. fam. The freshwater form previously identified as T. marina is described as Paratrimastix eleionoma n. sp., and Trimastix pyriformis becomes Paratrimastix pyriformis n. comb. Because of its phylogenetic position, 'true' Trimastix is potentially important for understanding the evolution of mitochondrion-related organelles in metamonads.

  3. Polyphenol-rich Avicennia marina leaf extracts induce apoptosis in human breast and liver cancer cells and in a nude mouse xenograft model

    PubMed Central

    Tu, Ming-Chin; Chang, Jia-Hua; Chen, Yen-Ju; Tu, Yu-Hsuan; Huang, Hsiu-Chen

    2016-01-01

    Avicennia marina is the most abundant and common mangrove species and has been used as a traditional medicine for skin diseases, rheumatism, ulcers, and smallpox. However, its anticancer activities and polyphenol contents remain poorly characterized. Thus, here we investigated anticancer activities of secondary A. marina metabolites that were purified by sequential soxhlet extraction in water, ethanol, methanol, and ethyl acetate (EtOAc). Experiments were performed in three human breast cancer cell lines (AU565, MDA-MB-231, and BT483), two human liver cancer cell lines (HepG2 and Huh7), and one normal cell line (NIH3T3). The chemotherapeutic potential of A. marina extracts was evaluated in a xenograft mouse model. The present data show that EtOAc extracts of A. marina leaves have the highest phenolic and flavonoid contents and anticancer activities and, following column chromatography, the EtOAc fractions F2-5, F3-2-9, and F3-2-10 showed higher cytotoxic effects than the other fractions. 1H-NMR and 13C-NMR profiles indicated that the F3-2-10 fraction contained avicennones D and E. EtOAc extracts of A. marina leaves also suppressed xenograft MDA-MB-231 tumor growth in nude mice, suggesting that EtOAc extracts of A. marina leaves may provide a useful treatment for breast cancer. PMID:27078842

  4. The role of marinas and recreational boating in the occurrence and distribution of exotic caprellids (Crustacea: Amphipoda) in the Western Mediterranean: Mallorca Island as a case study

    NASA Astrophysics Data System (ADS)

    Ros, Macarena; Vázquez-Luis, Maite; Guerra-García, José M.

    2013-10-01

    In the Mediterranean Sea, the number of alien marine crustacean species has increased over the past two decades. However, knowledge about small alien marine crustaceans, like caprellid amphipods, is still very scarce. To understand the role of marinas and recreational boating in the early step of the invasion process by non-indigenous caprellids, we studied the recreational boating pressure and the spatial distribution of caprellid species in Mallorca Island. We collected caprellids from 14 marinas and 9 exposed intertidal rocky shores between November 2011 and April 2012 and we analyzed the differences in habitat use of native and exotic caprellids. Eight caprellid species, six native and two exotic, were found. Alien caprellids were only present in marinas, reaching high densities of population. The analysis of recreational boating pressure reveals that Palma-Migjorn is the area that is subject to the highest potential risk of introduction of exotic species via ship fouling. In the secondary dispersal of alien caprellids, the study reflects that recreational boating seems effective as a secondary vector in the transport of exotic species from marinas to marinas but not from marinas to natural and exposed areas. An illustrated key of caprellids from Balearic Island is provided to differentiate native and non-indigenous species.

  5. Bromophenols from marine algae with potential anti-diabetic activities

    NASA Astrophysics Data System (ADS)

    Lin, Xiukun; Liu, Ming

    2012-12-01

    Marine algae contain various bromophenols with a variety of biological activities, including antimicrobial, anticancer, and anti-diabetic effects. Here, we briefly review the recent progress in researches on the biomaterials from marine algae, emphasizing the relationship between the structure and the potential anti-diabetic applications. Bromophenols from marine algae display their hyperglycemic effects by inhibiting the activities of protein tyrosine phosphatase 1B, α-glucosidase, as well as other mechanisms.

  6. Algae to Bio-Crude in Less Than 60 Minutes

    ScienceCinema

    Elliott, Doug

    2016-07-12

    Engineers have created a chemical process that produces useful crude oil just minutes after engineers pour in harvested algae -- a verdant green paste with the consistency of pea soup. The PNNL team combined several chemical steps into one continuous process that starts with an algae slurry that contains as much as 80 to 90 percent water. Most current processes require the algae to be dried -- an expensive process that takes a lot of energy. The research has been licensed by Genifuel Corp.

  7. Method for producing hydrogen and oxygen by use of algae

    DOEpatents

    Greenbaum, E.

    1982-06-16

    Efficiency of process for producing H/sub 2/ by subjecting algae in an aqueous phase to light irradiation is increased by culturing algae which has been bleached during a first period of irradiation in a culture medium in an aerobic atmosphere until it has regained color and then subjecting this algae to a second period of irradiation wherein hydrogen is produced at an enhanced rate.

  8. Method for producing hydrogen and oxygen by use of algae

    DOEpatents

    Greenbaum, Elias

    1984-01-01

    Efficiency of process for producing H.sub.2 by subjecting algae in an aqueous phase to light irradiation is increased by culturing algae which has been bleached during a first period of irradiation in a culture medium in an aerobic atmosphere until it has regained color and then subjecting this algae to a second period of irradiation wherein hydrogen is produced at an enhanced rate.

  9. Algae to Bio-Crude in Less Than 60 Minutes

    SciTech Connect

    Elliott, Doug

    2013-12-17

    Engineers have created a chemical process that produces useful crude oil just minutes after engineers pour in harvested algae -- a verdant green paste with the consistency of pea soup. The PNNL team combined several chemical steps into one continuous process that starts with an algae slurry that contains as much as 80 to 90 percent water. Most current processes require the algae to be dried -- an expensive process that takes a lot of energy. The research has been licensed by Genifuel Corp.

  10. Method and apparatus for iterative lysis and extraction of algae

    DOEpatents

    Chew, Geoffrey; Boggs, Tabitha; Dykes, Jr., H. Waite H.; Doherty, Stephen J.

    2015-12-01

    A method and system for processing algae involves the use of an ionic liquid-containing clarified cell lysate to lyse algae cells. The resulting crude cell lysate may be clarified and subsequently used to lyse algae cells. The process may be repeated a number of times before a clarified lysate is separated into lipid and aqueous phases for further processing and/or purification of desired products.

  11. Freshwater Cyanobacteria (Blue-Green Algae) Toxins: Isolation and Characterization

    DTIC Science & Technology

    1990-05-01

    division Cyanophyta , commonly called blue -green algae cr cyanobacteria . Although cyanobacteria are found in almost any environment ranging from hot...p ecst Available Copy ~’ COPy Ni AD FRESHWATER CYANOBACTERIA ( BLUE -GREEN ALGAE ) TOXINS:’ I ISOLATION AND CHARACTERIZATION < DTIC ANNUAL/FINAL...AA I 78 11. TITLE (In•.ju . ’,curry Ci.si fication) Freshwater Cyanobacteria ( blue -green algae ) Toxins: Isolatior and CharacteriZation 12. PERSONAL

  12. Freshwater Cyanobacteria (Blue-Green Algae) Toxins: Isolation and Characterization

    DTIC Science & Technology

    1989-01-15

    exclusively caused by strains of species that are members of the L division Cyanophyta , commonly called blue -green algae or cyanobacteria . Although...0 0 Lfl (NAD FRESHWATER CYANOBACTERIA ( BLUE -GREEN ALGAE ) TOXINS: ISOLATION AND CHARACTERIZATION ANNCUAL REPORT Wayne W. Carmichael Sarojini Bose...Frederick, Maryland 21701-5012 62770A 6277GA871 AA 378 11 TITLE &who* Secwn~y C11mrfaon) Freshwater Cyanobacteria ( blue -green algae ) Toxins: Isolation

  13. Overall Energy Considerations for Algae Species Comparison and Selection in Algae-to-Fuels Processes

    SciTech Connect

    Link, D.; Kail, B.; Curtis, W.; Tuerk,A.

    2011-01-01

    The controlled growth of microalgae as a feedstock for alternative transportation fuel continues to receive much attention. Microalgae have the characteristics of rapid growth rate, high oil (lipid) content, and ability to be grown in unconventional scenarios. Algae have also been touted as beneficial for CO{sub 2} reuse, as algae can be grown using CO{sub 2} emissions from fossil-based energy generation. Moreover, algae does not compete in the food chain, lessening the 'food versus fuel' debate. Most often, it is assumed that either rapid production rate or high oii content should be the primary factor in algae selection for algae-to-fuels production systems. However, many important characteristics of algae growth and lipid production must be considered for species selection, growth condition, and scale-up. Under light limited, high density, photoautotrophic conditions, the inherent growth rate of an organism does not affect biomass productivity, carbon fixation rate, and energy fixation rate. However, the oil productivity is organism dependent, due to physiological differences in how the organisms allocate captured photons for growth and oil production and due to the differing conditions under which organisms accumulate oils. Therefore, many different factors must be considered when assessing the overall energy efficiency of fuel production for a given algae species. Two species, Chlorella vulgaris and Botryococcus braunii, are popular choices when discussing algae-to-fuels systems. Chlorella is a very robust species, often outcompeting other species in mixed-culture systems, and produces a lipid that is composed primarily of free fatty acids and glycerides. Botryococcus is regarded as a slower growing species, and the lipid that it produces is characterized by high hydrocarbon content, primarily C28-C34 botryococcenes. The difference in growth rates is often considered to be an advantage oiChlorella. However, the total energy captured by each algal species in

  14. Acetone, butanol, and ethanol production from wastewater algae.

    PubMed

    Ellis, Joshua T; Hengge, Neal N; Sims, Ronald C; Miller, Charles D

    2012-05-01

    Acetone, butanol, and ethanol (ABE) fermentation by Clostridium saccharoperbutylacetonicum N1-4 using wastewater algae biomass as a carbon source was demonstrated. Algae from the Logan City Wastewater Lagoon system grow naturally at high rates providing an abundant source of renewable algal biomass. Batch fermentations were performed with 10% algae as feedstock. Fermentation of acid/base pretreated algae produced 2.74 g/L of total ABE, as compared with 7.27 g/L from pretreated algae supplemented with 1% glucose. Additionally, 9.74 g/L of total ABE was produced when xylanase and cellulase enzymes were supplemented to the pretreated algae media. The 1% glucose supplement increased total ABE production approximately 160%, while supplementing with enzymes resulted in a 250% increase in total ABE production when compared to production from pretreated algae with no supplementation of extraneous sugar and enzymes. Additionally, supplementation of enzymes produced the highest total ABE production yield of 0.311 g/g and volumetric productivity of 0.102 g/Lh. The use of non-pretreated algae produced 0.73 g/L of total ABE. The ability to engineer novel methods to produce these high value products from an abundant and renewable feedstock such as algae could have significant implications in stimulating domestic energy economies.

  15. Algae Bioreactor Using Submerged Enclosures with Semi-Permeable Membranes

    NASA Technical Reports Server (NTRS)

    Trent, Jonathan D (Inventor); Gormly, Sherwin J (Inventor); Embaye, Tsegereda N (Inventor); Delzeit, Lance D (Inventor); Flynn, Michael T (Inventor); Liggett, Travis A (Inventor); Buckwalter, Patrick W (Inventor); Baertsch, Robert (Inventor)

    2013-01-01

    Methods for producing hydrocarbons, including oil, by processing algae and/or other micro-organisms in an aquatic environment. Flexible bags (e.g., plastic) with CO.sub.2/O.sub.2 exchange membranes, suspended at a controllable depth in a first liquid (e.g., seawater), receive a second liquid (e.g., liquid effluent from a "dead zone") containing seeds for algae growth. The algae are cultivated and harvested in the bags, after most of the second liquid is removed by forward osmosis through liquid exchange membranes. The algae are removed and processed, and the bags are cleaned and reused.

  16. Method and apparatus for lysing and processing algae

    DOEpatents

    Chew, Geoffrey; Reich, Alton J.; Dykes, Jr., H. Waite H.; Di Salvo, Roberto

    2013-03-05

    Methods and apparatus for processing algae are described in which a hydrophilic ionic liquid is used to lyse algae cells at lower temperatures than existing algae processing methods. A salt or salt solution is used as a separation agent and to remove water from the ionic liquid, allowing the ionic liquid to be reused. The used salt may be dried or concentrated and reused. The relatively low lysis temperatures and recycling of the ionic liquid and salt reduce the environmental impact of the algae processing while providing biofuels and other useful products.

  17. Application of synthetic biology in cyanobacteria and algae.

    PubMed

    Wang, Bo; Wang, Jiangxin; Zhang, Weiwen; Meldrum, Deirdre R

    2012-01-01

    Cyanobacteria and algae are becoming increasingly attractive cell factories for producing renewable biofuels and chemicals due to their ability to capture solar energy and CO(2) and their relatively simple genetic background for genetic manipulation. Increasing research efforts from the synthetic biology approach have been made in recent years to modify cyanobacteria and algae for various biotechnological applications. In this article, we critically review recent progresses in developing genetic tools for characterizing or manipulating cyanobacteria and algae, the applications of genetically modified strains for synthesizing renewable products such as biofuels and chemicals. In addition, the emergent challenges in the development and application of synthetic biology for cyanobacteria and algae are also discussed.

  18. Exploring the potential of using algae in cosmetics.

    PubMed

    Wang, Hui-Min David; Chen, Ching-Chun; Huynh, Pauline; Chang, Jo-Shu

    2015-05-01

    The applications of microalgae in cosmetic products have recently received more attention in the treatment of skin problems, such as aging, tanning and pigment disorders. There are also potential uses in the areas of anti-aging, skin-whitening, and pigmentation reduction products. While algae species have already been used in some cosmetic formulations, such as moisturizing and thickening agents, algae remain largely untapped as an asset in this industry due to an apparent lack of utility as a primary active ingredient. This review article focuses on integrating studies on algae pertinent to skin health and beauty, with the purpose of identifying serviceable algae functions in practical cosmetic uses.

  19. Rhabdias paraensis sp. nov.: a parasite of the lungs of Rhinella marina (Amphibia: Bufonidae) from Brazilian Amazonia.

    PubMed

    Santos, Jeannie Nascimento dos; Melo, Francisco Tiago de Vasconcelos; Nascimento, Luciana de Cássia Silva do; Nascimento, Daisy Esther Batista do; Giese, Elane Guerreiro; Furtado, Adriano Penha

    2011-06-01

    The nematode parasites of Rhinella marina include species of the genus Rhabdias (Rhabdiasidae: Rhabditoidea). The present study describes Rhabdias paraensis sp. nov., which parasitizes the lungs of R. marina in Brazilian Amazonia. Of the more than 70 known species of this genus, 18 are parasites of bufonids, of which, eight are Neotropical. The new species described here is similar to Rhabdias alabialis in the absence of lips is different by the presence of conspicuous cephalic papillae. We describe details of the four rows of pores, which are distributed equally along the whole of the length of the body and connected with hypodermal cells, using histology and scanning electron microscopy. Other histological aspects of the internal structure of this nematode are also described.

  20. [Marina de Vasconcellos and the social sciences in Rio de Janeiro: a study of the social circles].

    PubMed

    Ribeiro, Adelia Maria Miglievich

    2008-06-01

    An investigation of the career of one of the "founding mothers" of the social sciences in Rio de Janeiro, Marina de Vasconcellos, successor of Arthur Ramos, is one way of understanding how anthropology was established in Rio de Janeiro. Conflicts and alliances, continuities and discontinuities, lie behind the pioneering Brazilian Society of Anthropology and Ethnology and the Institute of Social Sciences, both at Faculdade Nacional de Filosofia. Marina de Vasconcellos' professional life bore the marks of the clash between different schools of thought regarding anthropology at a time when university courses were being introduced. As a professor, she was committed to educating new professionals, and in 1968, she was steadfast in the struggle for university autonomy. The study leads to a reflection upon the criteria for success in academia, countering the view that this depends entirely on the publication of books and articles.