Genetic algorithms as discovery programs
Hilliard, M.R.; Liepins, G.
1986-01-01
Genetic algorithms are mathematical counterparts to natural selection and gene recombination. As such, they have provided one of the few significant breakthroughs in machine learning. Used with appropriate reward functions and apportionment of credit, they have been successfully applied to gas pipeline operation, x-ray registration and mathematical optimization problems. This paper discusses the basics of genetic algorithms, describes a few successes, and reports on current progress at Oak Ridge National Laboratory in applications to set covering and simulated robots.
Algorithmic Trading with Developmental and Linear Genetic Programming
NASA Astrophysics Data System (ADS)
Wilson, Garnett; Banzhaf, Wolfgang
A developmental co-evolutionary genetic programming approach (PAM DGP) and a standard linear genetic programming (LGP) stock trading systemare applied to a number of stocks across market sectors. Both GP techniques were found to be robust to market fluctuations and reactive to opportunities associated with stock price rise and fall, with PAMDGP generating notably greater profit in some stock trend scenarios. Both algorithms were very accurate at buying to achieve profit and selling to protect assets, while exhibiting bothmoderate trading activity and the ability to maximize or minimize investment as appropriate. The content of the trading rules produced by both algorithms are also examined in relation to stock price trend scenarios.
NASA Technical Reports Server (NTRS)
Wang, Lui; Bayer, Steven E.
1991-01-01
Genetic algorithms are mathematical, highly parallel, adaptive search procedures (i.e., problem solving methods) based loosely on the processes of natural genetics and Darwinian survival of the fittest. Basic genetic algorithms concepts are introduced, genetic algorithm applications are introduced, and results are presented from a project to develop a software tool that will enable the widespread use of genetic algorithm technology.
EVOLVING RETRIEVAL ALGORITHMS WITH A GENETIC PROGRAMMING SCHEME
J. THEILER; ET AL
1999-06-01
The retrieval of scene properties (surface temperature, material type, vegetation health, etc.) from remotely sensed data is the ultimate goal of many earth observing satellites. The algorithms that have been developed for these retrievals are informed by physical models of how the raw data were generated. This includes models of radiation as emitted and/or rejected by the scene, propagated through the atmosphere, collected by the optics, detected by the sensor, and digitized by the electronics. To some extent, the retrieval is the inverse of this ''forward'' modeling problem. But in contrast to this forward modeling, the practical task of making inferences about the original scene usually requires some ad hoc assumptions, good physical intuition, and a healthy dose of trial and error. The standard MTI data processing pipeline will employ algorithms developed with this traditional approach. But we will discuss some preliminary research on the use of a genetic programming scheme to ''evolve'' retrieval algorithms. Such a scheme cannot compete with the physical intuition of a remote sensing scientist, but it may be able to automate some of the trial and error. In this scenario, a training set is used, which consists of multispectral image data and the associated ''ground truth;'' that is, a registered map of the desired retrieval quantity. The genetic programming scheme attempts to combine a core set of image processing primitives to produce an IDL (Interactive Data Language) program which estimates this retrieval quantity from the raw data.
Evolving retrieval algorithms with a genetic programming scheme
NASA Astrophysics Data System (ADS)
Theiler, James P.; Harvey, Neal R.; Brumby, Steven P.; Szymanski, John J.; Alferink, Steve; Perkins, Simon J.; Porter, Reid B.; Bloch, Jeffrey J.
1999-10-01
The retrieval of scene properties (surface temperature, material type, vegetation health, etc.) from remotely sensed data is the ultimate goal of many earth observing satellites. The algorithms that have been developed for these retrievals are informed by physical models of how the raw data were generated. This includes models of radiation as emitted and/or reflected by the scene, propagated through the atmosphere, collected by the optics, detected by the sensor, and digitized by the electronics. To some extent, the retrieval is the inverse of this 'forward' modeling problem. But in contrast to this forward modeling, the practical task of making inferences about the original scene usually requires some ad hoc assumptions, good physical intuition, and a healthy dose of trial and error. The standard MTI data processing pipeline will employ algorithms developed with this traditional approach. But we will discuss some preliminary research on the use of a genetic programming scheme to 'evolve' retrieval algorithms. Such a scheme cannot compete with the physical intuition of a remote sensing scientist, but it may be able to automate some of the trial and error. In this scenario, a training set is used, which consists of multispectral image data and the associated 'ground truth;' that is, a registered map of the desired retrieval quantity. The genetic programming scheme attempts to combine a core set of image processing primitives to produce an IDL (Interactive Data Language) program which estimates this retrieval quantity from the raw data.
Empirical study of self-configuring genetic programming algorithm performance and behaviour
NASA Astrophysics Data System (ADS)
Semenkin, E.; Semenkina, M.
2015-01-01
The behaviour of the self-configuring genetic programming algorithm with a modified uniform crossover operator that implements a selective pressure on the recombination stage, is studied over symbolic programming problems. The operator's probabilistic rates interplay is studied and the role of operator variants on algorithm performance is investigated. Algorithm modifications based on the results of investigations are suggested. The performance improvement of the algorithm is demonstrated by the comparative analysis of suggested algorithms on the benchmark and real world problems.
Bardsiri, Mahshid Khatibi; Eftekhari, Mahdi; Mousavi, Reza
2015-01-01
In this study the problem of protein fold recognition, that is a classification task, is solved via a hybrid of evolutionary algorithms namely multi-gene Genetic Programming (GP) and Genetic Algorithm (GA). Our proposed method consists of two main stages and is performed on three datasets taken from the literature. Each dataset contains different feature groups and classes. In the first step, multi-gene GP is used for producing binary classifiers based on various feature groups for each class. Then, different classifiers obtained for each class are combined via weighted voting so that the weights are determined through GA. At the end of the first step, there is a separate binary classifier for each class. In the second stage, the obtained binary classifiers are combined via GA weighting in order to generate the overall classifier. The final obtained classifier is superior to the previous works found in the literature in terms of classification accuracy. PMID:25786796
NASA Astrophysics Data System (ADS)
Theofilatos, Konstantinos; Georgopoulos, Efstratios; Likothanassis, Spiridon
2009-09-01
In this paper, a variation of traditional Genetic Programming(GP) is used to model the MagnetoencephaloGram(MEG) of Epileptic Patients. This variation is Linear Genetic Programming(LGP). LGP is a particular subset of GP wherein computer programs in population are represented as a sequence of instructions from imperative programming language or machine language. The derived models from this method were simplified using genetic algorithms. The proposed method was used to model the MEG signal of epileptic patients using 6 different datasets. Each dataset uses different number of previous values of MEG to predict the next value. The models were tested in datasets different from the ones which were used to produce them and the results were very promising.
NASA Astrophysics Data System (ADS)
Sastry, Kumara Narasimha
2007-03-01
Effective and efficient rnultiscale modeling is essential to advance both the science and synthesis in a, wide array of fields such as physics, chemistry, materials science; biology, biotechnology and pharmacology. This study investigates the efficacy and potential of rising genetic algorithms for rnultiscale materials modeling and addresses some of the challenges involved in designing competent algorithms that solve hard problems quickly, reliably and accurately. In particular, this thesis demonstrates the use of genetic algorithms (GAs) and genetic programming (GP) in multiscale modeling with the help of two non-trivial case studies in materials science and chemistry. The first case study explores the utility of genetic programming (GP) in multi-timescaling alloy kinetics simulations. In essence, GP is used to bridge molecular dynamics and kinetic Monte Carlo methods to span orders-of-magnitude in simulation time. Specifically, GP is used to regress symbolically an inline barrier function from a limited set of molecular dynamics simulations to enable kinetic Monte Carlo that simulate seconds of real time. Results on a non-trivial example of vacancy-assisted migration on a surface of a face-centered cubic (fcc) Copper-Cobalt (CuxCo 1-x) alloy show that GP predicts all barriers with 0.1% error from calculations for less than 3% of active configurations, independent of type of potentials used to obtain the learning set of barriers via molecular dynamics. The resulting method enables 2--9 orders-of-magnitude increase in real-time dynamics simulations taking 4--7 orders-of-magnitude less CPU time. The second case study presents the application of multiobjective genetic algorithms (MOGAs) in multiscaling quantum chemistry simulations. Specifically, MOGAs are used to bridge high-level quantum chemistry and semiempirical methods to provide accurate representation of complex molecular excited-state and ground-state behavior. Results on ethylene and benzene---two common
NASA Astrophysics Data System (ADS)
Biswas, Papun; Chakraborti, Debjani
2010-10-01
This paper describes how the genetic algorithms (GAs) can be efficiently used to fuzzy goal programming (FGP) formulation of optimal power flow problems having multiple objectives. In the proposed approach, the different constraints, various relationships of optimal power flow calculations are fuzzily described. In the model formulation of the problem, the membership functions of the defined fuzzy goals are characterized first for measuring the degree of achievement of the aspiration levels of the goals specified in the decision making context. Then, the achievement function for minimizing the regret for under-deviations from the highest membership value (unity) of the defined membership goals to the extent possible on the basis of priorities is constructed for optimal power flow problems. In the solution process, the GA method is employed to the FGP formulation of the problem for achievement of the highest membership value (unity) of the defined membership functions to the extent possible in the decision making environment. In the GA based solution search process, the conventional Roulette wheel selection scheme, arithmetic crossover and random mutation are taken into consideration to reach a satisfactory decision. The developed method has been tested on IEEE 6-generator 30-bus System. Numerical results show that this method is promising for handling uncertain constraints in practical power systems.
General cardinality genetic algorithms
Koehler; Bhattacharyya; Vose
1997-01-01
A complete generalization of the Vose genetic algorithm model from the binary to higher cardinality case is provided. Boolean AND and EXCLUSIVE-OR operators are replaced by multiplication and addition over rings of integers. Walsh matrices are generalized with finite Fourier transforms for higher cardinality usage. Comparison of results to the binary case are provided. PMID:10021767
Genetic algorithms and MCML program for recovery of optical properties of homogeneous turbid media
Morales Cruzado, Beatriz; y Montiel, Sergio Vázquez; Atencio, José Alberto Delgado
2013-01-01
In this paper, we present and validate a new method for optical properties recovery of turbid media with slab geometry. This method is an iterative method that compares diffuse reflectance and transmittance, measured using integrating spheres, with those obtained using the known algorithm MCML. The search procedure is based in the evolution of a population due to selection of the best individual, i.e., using a genetic algorithm. This new method includes several corrections such as non-linear effects in integrating spheres measurements and loss of light due to the finite size of the sample. As a potential application and proof-of-principle experiment of this new method, we use this new algorithm in the recovery of optical properties of blood samples at different degrees of coagulation. PMID:23504404
Using Dynamic Programming and Genetic Algorithms to Reduce Erosion Risks From Forest Roads
NASA Astrophysics Data System (ADS)
Madej, M.; Eschenbach, E.; Teasley, R.; Diaz, C.; Wartella, J.; Simi, J.
2002-12-01
Many anadromous fisheries streams in the Pacific Northwest have been damaged by various land use activities, including timber harvest and road construction. Unpaved forest roads can cause erosion and downstream sedimentation damage in anadromous fish-bearing streams. Although road decommissioning and road upgrading activities have been conducted on many of these roads, these activities have usually been implemented and evaluated on a site-specific basis without the benefit of a watershed perspective. Land managers still struggle with designing the most effective road treatment plan to minimize erosion while keeping costs reasonable across a large land base. Trade-offs between costs of different levels of treatment and the net effect on reducing sediment risks to streams need to be quantified. For example, which problems should be treated first, and by what treatment method? Is it better to fix one large problem or 100 small problems? If sediment reduction to anadromous fish-bearing streams is the desired outcome of road treatment activities, a more rigorous evaluation of risks and optimization of treatments is needed. Two approaches, Dynamic Programming (DP) and Genetic Algorithms (GA), were successfully used to determine the most effective treatment levels for roads and stream crossings in a pilot study basin with approximately 200 road segments and stream crossings and in an actual watershed with approximately 600 road segments and crossings. The optimization models determine the treatment levels for roads and crossings that maximize the total sediment saved within a watershed while maintaining the total treatment cost within the specified budget. The optimization models import GIS data on roads and crossings and export the optimal treatment level for each road and crossing to the GIS watershed model.
NASA Astrophysics Data System (ADS)
Gladwin, D.; Stewart, P.; Stewart, J.
2011-02-01
This article addresses the problem of maintaining a stable rectified DC output from the three-phase AC generator in a series-hybrid vehicle powertrain. The series-hybrid prime power source generally comprises an internal combustion (IC) engine driving a three-phase permanent magnet generator whose output is rectified to DC. A recent development has been to control the engine/generator combination by an electronically actuated throttle. This system can be represented as a nonlinear system with significant time delay. Previously, voltage control of the generator output has been achieved by model predictive methods such as the Smith Predictor. These methods rely on the incorporation of an accurate system model and time delay into the control algorithm, with a consequent increase in computational complexity in the real-time controller, and as a necessity relies to some extent on the accuracy of the models. Two complementary performance objectives exist for the control system. Firstly, to maintain the IC engine at its optimal operating point, and secondly, to supply a stable DC supply to the traction drive inverters. Achievement of these goals minimises the transient energy storage requirements at the DC link, with a consequent reduction in both weight and cost. These objectives imply constant velocity operation of the IC engine under external load disturbances and changes in both operating conditions and vehicle speed set-points. In order to achieve these objectives, and reduce the complexity of implementation, in this article a controller is designed by the use of Genetic Programming methods in the Simulink modelling environment, with the aim of obtaining a relatively simple controller for the time-delay system which does not rely on the implementation of real time system models or time delay approximations in the controller. A methodology is presented to utilise the miriad of existing control blocks in the Simulink libraries to automatically evolve optimal control
Genetic Algorithms and Local Search
NASA Technical Reports Server (NTRS)
Whitley, Darrell
1996-01-01
The first part of this presentation is a tutorial level introduction to the principles of genetic search and models of simple genetic algorithms. The second half covers the combination of genetic algorithms with local search methods to produce hybrid genetic algorithms. Hybrid algorithms can be modeled within the existing theoretical framework developed for simple genetic algorithms. An application of a hybrid to geometric model matching is given. The hybrid algorithm yields results that improve on the current state-of-the-art for this problem.
Constraints in Genetic Programming
NASA Technical Reports Server (NTRS)
Janikow, Cezary Z.
1996-01-01
Genetic programming refers to a class of genetic algorithms utilizing generic representation in the form of program trees. For a particular application, one needs to provide the set of functions, whose compositions determine the space of program structures being evolved, and the set of terminals, which determine the space of specific instances of those programs. The algorithm searches the space for the best program for a given problem, applying evolutionary mechanisms borrowed from nature. Genetic algorithms have shown great capabilities in approximately solving optimization problems which could not be approximated or solved with other methods. Genetic programming extends their capabilities to deal with a broader variety of problems. However, it also extends the size of the search space, which often becomes too large to be effectively searched even by evolutionary methods. Therefore, our objective is to utilize problem constraints, if such can be identified, to restrict this space. In this publication, we propose a generic constraint specification language, powerful enough for a broad class of problem constraints. This language has two elements -- one reduces only the number of program instances, the other reduces both the space of program structures as well as their instances. With this language, we define the minimal set of complete constraints, and a set of operators guaranteeing offspring validity from valid parents. We also show that these operators are not less efficient than the standard genetic programming operators if one preprocesses the constraints - the necessary mechanisms are identified.
NASA Astrophysics Data System (ADS)
Liu, Hua-Long; Liu, Hua-Dong
2014-10-01
Partial discharge (PD) in power transformers is one of the prime reasons resulting in insulation degradation and power faults. Hence, it is of great importance to study the techniques of the detection and localization of PD in theory and practice. The detection and localization of PD employing acoustic emission (AE) techniques, as a kind of non-destructive testing, plus due to the advantages of powerful capability of locating and high precision, have been paid more and more attention. The localization algorithm is the key factor to decide the localization accuracy in AE localization of PD. Many kinds of localization algorithms exist for the PD source localization adopting AE techniques including intelligent and non-intelligent algorithms. However, the existed algorithms possess some defects such as the premature convergence phenomenon, poor local optimization ability and unsuitability for the field applications. To overcome the poor local optimization ability and easily caused premature convergence phenomenon of the fundamental genetic algorithm (GA), a new kind of improved GA is proposed, namely the sequence quadratic programming-genetic algorithm (SQP-GA). For the hybrid optimization algorithm, SQP-GA, the sequence quadratic programming (SQP) algorithm which is used as a basic operator is integrated into the fundamental GA, so the local searching ability of the fundamental GA is improved effectively and the premature convergence phenomenon is overcome. Experimental results of the numerical simulations of benchmark functions show that the hybrid optimization algorithm, SQP-GA, is better than the fundamental GA in the convergence speed and optimization precision, and the proposed algorithm in this paper has outstanding optimization effect. At the same time, the presented SQP-GA in the paper is applied to solve the ultrasonic localization problem of PD in transformers, then the ultrasonic localization method of PD in transformers based on the SQP-GA is proposed. And
NASA Astrophysics Data System (ADS)
Qiu, J. P.; Niu, D. X.
Micro-grid is one of the key technologies of the future energy supplies. Take economic planning. reliability, and environmental protection of micro grid as a basis for the analysis of multi-strategy objective programming problems for micro grid which contains wind power, solar power, and battery and micro gas turbine. Establish the mathematical model of each power generation characteristics and energy dissipation. and change micro grid planning multi-objective function under different operating strategies to a single objective model based on AHP method. Example analysis shows that in combination with dynamic ant mixed genetic algorithm can get the optimal power output of this model.
NASA Astrophysics Data System (ADS)
Chen, Zheng; Mi, Chris Chunting; Xiong, Rui; Xu, Jun; You, Chenwen
2014-02-01
This paper introduces an online and intelligent energy management controller to improve the fuel economy of a power-split plug-in hybrid electric vehicle (PHEV). Based on analytic analysis between fuel-rate and battery current at different driveline power and vehicle speed, quadratic equations are applied to simulate the relationship between battery current and vehicle fuel-rate. The power threshold at which engine is turned on is optimized by genetic algorithm (GA) based on vehicle fuel-rate, battery state of charge (SOC) and driveline power demand. The optimal battery current when the engine is on is calculated using quadratic programming (QP) method. The proposed algorithm can control the battery current effectively, which makes the engine work more efficiently and thus reduce the fuel-consumption. Moreover, the controller is still applicable when the battery is unhealthy. Numerical simulations validated the feasibility of the proposed controller.
NASA Astrophysics Data System (ADS)
Paino, A.; Keller, J.; Popescu, M.; Stone, K.
2014-06-01
In this paper we present an approach that uses Genetic Programming (GP) to evolve novel feature extraction algorithms for greyscale images. Our motivation is to create an automated method of building new feature extraction algorithms for images that are competitive with commonly used human-engineered features, such as Local Binary Pattern (LBP) and Histogram of Oriented Gradients (HOG). The evolved feature extraction algorithms are functions defined over the image space, and each produces a real-valued feature vector of variable length. Each evolved feature extractor breaks up the given image into a set of cells centered on every pixel, performs evolved operations on each cell, and then combines the results of those operations for every cell using an evolved operator. Using this method, the algorithm is flexible enough to reproduce both LBP and HOG features. The dataset we use to train and test our approach consists of a large number of pre-segmented image "chips" taken from a Forward Looking Infrared Imagery (FLIR) camera mounted on the hood of a moving vehicle. The goal is to classify each image chip as either containing or not containing a buried object. To this end, we define the fitness of a candidate solution as the cross-fold validation accuracy of the features generated by said candidate solution when used in conjunction with a Support Vector Machine (SVM) classifier. In order to validate our approach, we compare the classification accuracy of an SVM trained using our evolved features with the accuracy of an SVM trained using mainstream feature extraction algorithms, including LBP and HOG.
Scheduling with genetic algorithms
NASA Technical Reports Server (NTRS)
Fennel, Theron R.; Underbrink, A. J., Jr.; Williams, George P. W., Jr.
1994-01-01
In many domains, scheduling a sequence of jobs is an important function contributing to the overall efficiency of the operation. At Boeing, we develop schedules for many different domains, including assembly of military and commercial aircraft, weapons systems, and space vehicles. Boeing is under contract to develop scheduling systems for the Space Station Payload Planning System (PPS) and Payload Operations and Integration Center (POIC). These applications require that we respect certain sequencing restrictions among the jobs to be scheduled while at the same time assigning resources to the jobs. We call this general problem scheduling and resource allocation. Genetic algorithms (GA's) offer a search method that uses a population of solutions and benefits from intrinsic parallelism to search the problem space rapidly, producing near-optimal solutions. Good intermediate solutions are probabalistically recombined to produce better offspring (based upon some application specific measure of solution fitness, e.g., minimum flowtime, or schedule completeness). Also, at any point in the search, any intermediate solution can be accepted as a final solution; allowing the search to proceed longer usually produces a better solution while terminating the search at virtually any time may yield an acceptable solution. Many processes are constrained by restrictions of sequence among the individual jobs. For a specific job, other jobs must be completed beforehand. While there are obviously many other constraints on processes, it is these on which we focussed for this research: how to allocate crews to jobs while satisfying job precedence requirements and personnel, and tooling and fixture (or, more generally, resource) requirements.
Messy genetic algorithms: Recent developments
Kargupta, H.
1996-09-01
Messy genetic algorithms define a rare class of algorithms that realize the need for detecting appropriate relations among members of the search domain in optimization. This paper reviews earlier works in messy genetic algorithms and describes some recent developments. It also describes the gene expression messy GA (GEMGA)--an {Omicron}({Lambda}{sup {kappa}}({ell}{sup 2} + {kappa})) sample complexity algorithm for the class of order-{kappa} delineable problems (problems that can be solved by considering no higher than order-{kappa} relations) of size {ell} and alphabet size {Lambda}. Experimental results are presented to demonstrate the scalability of the GEMGA.
Scheduling Jobs with Genetic Algorithms
NASA Astrophysics Data System (ADS)
Ferrolho, António; Crisóstomo, Manuel
Most scheduling problems are NP-hard, the time required to solve the problem optimally increases exponentially with the size of the problem. Scheduling problems have important applications, and a number of heuristic algorithms have been proposed to determine relatively good solutions in polynomial time. Recently, genetic algorithms (GA) are successfully used to solve scheduling problems, as shown by the growing numbers of papers. GA are known as one of the most efficient algorithms for solving scheduling problems. But, when a GA is applied to scheduling problems various crossovers and mutations operators can be applicable. This paper presents and examines a new concept of genetic operators for scheduling problems. A software tool called hybrid and flexible genetic algorithm (HybFlexGA) was developed to examine the performance of various crossover and mutation operators by computing simulations of job scheduling problems.
NASA Astrophysics Data System (ADS)
Huang, Wen-Cheng; Yuan, Lun-Chin; Lee, Chi-Ming
2002-12-01
The objective of this paper is to present a genetic algorithm-based stochastic dynamic programming (GA-based SDP) to cope with the dimensionality problem of a multiple-reservoir system. The joint long-term operation of a parallel reservoir system in the Feitsui and Shihmen reservoirs in northern Taiwan demonstrates the successful application of the proposed GA-based SDP model. Within the case study system it is believed that GA is a useful technique in supporting optimization. Though the employment of GA-based SDP may be time consuming as it proceeds through generation by generation, the model can overcome the "dimensionality curse" in searching solutions. Simulation results show Feitsui's surplus water can be utilized efficiently to fill Shihmen's deficit water without affecting Feitsui's main purpose as Taipei city's water supply. The optimal joint operation suggests that Feitsui, on average, can provide 650,000 m3/day and 920,000 m3/day to Shihmen during the wet season and dry season, respectively.
Genetic Algorithm Approaches for Actuator Placement
NASA Technical Reports Server (NTRS)
Crossley, William A.
2000-01-01
This research investigated genetic algorithm approaches for smart actuator placement to provide aircraft maneuverability without requiring hinged flaps or other control surfaces. The effort supported goals of the Multidisciplinary Design Optimization focus efforts in NASA's Aircraft au program. This work helped to properly identify various aspects of the genetic algorithm operators and parameters that allow for placement of discrete control actuators/effectors. An improved problem definition, including better definition of the objective function and constraints, resulted from this research effort. The work conducted for this research used a geometrically simple wing model; however, an increasing number of potential actuator placement locations were incorporated to illustrate the ability of the GA to determine promising actuator placement arrangements. This effort's major result is a useful genetic algorithm-based approach to assist in the discrete actuator/effector placement problem.
Simultaneous stabilization using genetic algorithms
Benson, R.W.; Schmitendorf, W.E. . Dept. of Mechanical Engineering)
1991-01-01
This paper considers the problem of simultaneously stabilizing a set of plants using full state feedback. The problem is converted to a simple optimization problem which is solved by a genetic algorithm. Several examples demonstrate the utility of this method. 14 refs., 8 figs.
Programming parallel vision algorithms
Shapiro, L.G.
1988-01-01
Computer vision requires the processing of large volumes of data and requires parallel architectures and algorithms to be useful in real-time, industrial applications. The INSIGHT dataflow language was designed to allow encoding of vision algorithms at all levels of the computer vision paradigm. INSIGHT programs, which are relational in nature, can be translated into a graph structure that represents an architecture for solving a particular vision problem or a configuration of a reconfigurable computational network. The authors consider here INSIGHT programs that produce a parallel net architecture for solving low-, mid-, and high-level vision tasks.
Problem solving with genetic algorithms and Splicer
NASA Technical Reports Server (NTRS)
Bayer, Steven E.; Wang, Lui
1991-01-01
Genetic algorithms are highly parallel, adaptive search procedures (i.e., problem-solving methods) loosely based on the processes of population genetics and Darwinian survival of the fittest. Genetic algorithms have proven useful in domains where other optimization techniques perform poorly. The main purpose of the paper is to discuss a NASA-sponsored software development project to develop a general-purpose tool for using genetic algorithms. The tool, called Splicer, can be used to solve a wide variety of optimization problems and is currently available from NASA and COSMIC. This discussion is preceded by an introduction to basic genetic algorithm concepts and a discussion of genetic algorithm applications.
Genetic Algorithm for Optimization: Preprocessor and Algorithm
NASA Technical Reports Server (NTRS)
Sen, S. K.; Shaykhian, Gholam A.
2006-01-01
Genetic algorithm (GA) inspired by Darwin's theory of evolution and employed to solve optimization problems - unconstrained or constrained - uses an evolutionary process. A GA has several parameters such the population size, search space, crossover and mutation probabilities, and fitness criterion. These parameters are not universally known/determined a priori for all problems. Depending on the problem at hand, these parameters need to be decided such that the resulting GA performs the best. We present here a preprocessor that achieves just that, i.e., it determines, for a specified problem, the foregoing parameters so that the consequent GA is a best for the problem. We stress also the need for such a preprocessor both for quality (error) and for cost (complexity) to produce the solution. The preprocessor includes, as its first step, making use of all the information such as that of nature/character of the function/system, search space, physical/laboratory experimentation (if already done/available), and the physical environment. It also includes the information that can be generated through any means - deterministic/nondeterministic/graphics. Instead of attempting a solution of the problem straightway through a GA without having/using the information/knowledge of the character of the system, we would do consciously a much better job of producing a solution by using the information generated/created in the very first step of the preprocessor. We, therefore, unstintingly advocate the use of a preprocessor to solve a real-world optimization problem including NP-complete ones before using the statistically most appropriate GA. We also include such a GA for unconstrained function optimization problems.
New Results in Astrodynamics Using Genetic Algorithms
NASA Technical Reports Server (NTRS)
Coverstone-Carroll, V.; Hartmann, J. W.; Williams, S. N.; Mason, W. J.
1998-01-01
Generic algorithms have gained popularity as an effective procedure for obtaining solutions to traditionally difficult space mission optimization problems. In this paper, a brief survey of the use of genetic algorithms to solve astrodynamics problems is presented and is followed by new results obtained from applying a Pareto genetic algorithm to the optimization of low-thrust interplanetary spacecraft missions.
Learning Intelligent Genetic Algorithms Using Japanese Nonograms
ERIC Educational Resources Information Center
Tsai, Jinn-Tsong; Chou, Ping-Yi; Fang, Jia-Cen
2012-01-01
An intelligent genetic algorithm (IGA) is proposed to solve Japanese nonograms and is used as a method in a university course to learn evolutionary algorithms. The IGA combines the global exploration capabilities of a canonical genetic algorithm (CGA) with effective condensed encoding, improved fitness function, and modified crossover and…
Excursion-Set-Mediated Genetic Algorithm
NASA Technical Reports Server (NTRS)
Noever, David; Baskaran, Subbiah
1995-01-01
Excursion-set-mediated genetic algorithm (ESMGA) is embodiment of method of searching for and optimizing computerized mathematical models. Incorporates powerful search and optimization techniques based on concepts analogous to natural selection and laws of genetics. In comparison with other genetic algorithms, this one achieves stronger condition for implicit parallelism. Includes three stages of operations in each cycle, analogous to biological generation.
Genetic Algorithms with Local Minimum Escaping Technique
NASA Astrophysics Data System (ADS)
Tamura, Hiroki; Sakata, Kenichiro; Tang, Zheng; Ishii, Masahiro
In this paper, we propose a genetic algorithm(GA) with local minimum escaping technique. This proposed method uses the local minimum escaping techique. It can escape from the local minimum by correcting parameters when genetic algorithm falls into a local minimum. Simulations are performed to scheduling problem without buffer capacity using this proposed method, and its validity is shown.
Cao, Buwen; Luo, Jiawei; Liang, Cheng; Wang, Shulin; Song, Dan
2015-10-01
The identification of protein complexes in protein-protein interaction (PPI) networks has greatly advanced our understanding of biological organisms. Existing computational methods to detect protein complexes are usually based on specific network topological properties of PPI networks. However, due to the inherent complexity of the network structures, the identification of protein complexes may not be fully addressed by using single network topological property. In this study, we propose a novel MultiObjective Evolutionary Programming Genetic Algorithm (MOEPGA) which integrates multiple network topological features to detect biologically meaningful protein complexes. Our approach first systematically analyzes the multiobjective problem in terms of identifying protein complexes from PPI networks, and then constructs the objective function of the iterative algorithm based on three common topological properties of protein complexes from the benchmark dataset, finally we describe our algorithm, which mainly consists of three steps, population initialization, subgraph mutation and subgraph selection operation. To show the utility of our method, we compared MOEPGA with several state-of-the-art algorithms on two yeast PPI datasets. The experiment results demonstrate that the proposed method can not only find more protein complexes but also achieve higher accuracy in terms of fscore. Moreover, our approach can cover a certain number of proteins in the input PPI network in terms of the normalized clustering score. Taken together, our method can serve as a powerful framework to detect protein complexes in yeast PPI networks, thereby facilitating the identification of the underlying biological functions. PMID:26298638
Saving Resources with Plagues in Genetic Algorithms
de Vega, F F; Cantu-Paz, E; Lopez, J I; Manzano, T
2004-06-15
The population size of genetic algorithms (GAs) affects the quality of the solutions and the time required to find them. While progress has been made in estimating the population sizes required to reach a desired solution quality for certain problems, in practice the sizing of populations is still usually performed by trial and error. These trials might lead to find a population that is large enough to reach a satisfactory solution, but there may still be opportunities to optimize the computational cost by reducing the size of the population. This paper presents a technique called plague that periodically removes a number of individuals from the population as the GA executes. Recently, the usefulness of the plague has been demonstrated for genetic programming. The objective of this paper is to extend the study of plagues to genetic algorithms. We experiment with deceptive trap functions, a tunable difficult problem for GAs, and the experiments show that plagues can save computational time while maintaining solution quality and reliability.
Fuzzy Information Retrieval Using Genetic Algorithms and Relevance Feedback.
ERIC Educational Resources Information Center
Petry, Frederick E.; And Others
1993-01-01
Describes an approach that combines concepts from information retrieval, fuzzy set theory, and genetic programing to improve weighted Boolean query formulation via relevance feedback. Highlights include background on information retrieval systems; genetic algorithms; subproblem formulation; and preliminary results based on a testbed. (Contains 12…
Genetic-Algorithm Tool For Search And Optimization
NASA Technical Reports Server (NTRS)
Wang, Lui; Bayer, Steven
1995-01-01
SPLICER computer program used to solve search and optimization problems. Genetic algorithms adaptive search procedures (i.e., problem-solving methods) based loosely on processes of natural selection and Darwinian "survival of fittest." Algorithms apply genetically inspired operators to populations of potential solutions in iterative fashion, creating new populations while searching for optimal or nearly optimal solution to problem at hand. Written in Think C.
NASA Astrophysics Data System (ADS)
Hsu, Chih-Ming
2014-12-01
Portfolio optimisation is an important issue in the field of investment/financial decision-making and has received considerable attention from both researchers and practitioners. However, besides portfolio optimisation, a complete investment procedure should also include the selection of profitable investment targets and determine the optimal timing for buying/selling the investment targets. In this study, an integrated procedure using data envelopment analysis (DEA), artificial bee colony (ABC) and genetic programming (GP) is proposed to resolve a portfolio optimisation problem. The proposed procedure is evaluated through a case study on investing in stocks in the semiconductor sub-section of the Taiwan stock market for 4 years. The potential average 6-month return on investment of 9.31% from 1 November 2007 to 31 October 2011 indicates that the proposed procedure can be considered a feasible and effective tool for making outstanding investment plans, and thus making profits in the Taiwan stock market. Moreover, it is a strategy that can help investors to make profits even when the overall stock market suffers a loss.
Genetic-algorithm-based tri-state neural networks
NASA Astrophysics Data System (ADS)
Uang, Chii-Maw; Chen, Wen-Gong; Horng, Ji-Bin
2002-09-01
A new method, using genetic algorithms, for constructing a tri-state neural network is presented. The global searching features of the genetic algorithms are adopted to help us easily find the interconnection weight matrix of a bipolar neural network. The construction method is based on the biological nervous systems, which evolve the parameters encoded in genes. Taking the advantages of conventional (binary) genetic algorithms, a two-level chromosome structure is proposed for training the tri-state neural network. A Matlab program is developed for simulating the network performances. The results show that the proposed genetic algorithms method not only has the features of accurate of constructing the interconnection weight matrix, but also has better network performance.
Genetic algorithms at UC Davis/LLNL
Vemuri, V.R.
1993-12-31
A tutorial introduction to genetic algorithms is given. This brief tutorial should serve the purpose of introducing the subject to the novice. The tutorial is followed by a brief commentary on the term project reports that follow.
Genetic algorithms and supernovae type Ia analysis
Bogdanos, Charalampos; Nesseris, Savvas E-mail: nesseris@nbi.dk
2009-05-15
We introduce genetic algorithms as a means to analyze supernovae type Ia data and extract model-independent constraints on the evolution of the Dark Energy equation of state w(z) {identical_to} P{sub DE}/{rho}{sub DE}. Specifically, we will give a brief introduction to the genetic algorithms along with some simple examples to illustrate their advantages and finally we will apply them to the supernovae type Ia data. We find that genetic algorithms can lead to results in line with already established parametric and non-parametric reconstruction methods and could be used as a complementary way of treating SNIa data. As a non-parametric method, genetic algorithms provide a model-independent way to analyze data and can minimize bias due to premature choice of a dark energy model.
Self-adaptive parameters in genetic algorithms
NASA Astrophysics Data System (ADS)
Pellerin, Eric; Pigeon, Luc; Delisle, Sylvain
2004-04-01
Genetic algorithms are powerful search algorithms that can be applied to a wide range of problems. Generally, parameter setting is accomplished prior to running a Genetic Algorithm (GA) and this setting remains unchanged during execution. The problem of interest to us here is the self-adaptive parameters adjustment of a GA. In this research, we propose an approach in which the control of a genetic algorithm"s parameters can be encoded within the chromosome of each individual. The parameters" values are entirely dependent on the evolution mechanism and on the problem context. Our preliminary results show that a GA is able to learn and evaluate the quality of self-set parameters according to their degree of contribution to the resolution of the problem. These results are indicative of a promising approach to the development of GAs with self-adaptive parameter settings that do not require the user to pre-adjust parameters at the outset.
Adaptive sensor fusion using genetic algorithms
Fitzgerald, D.S.; Adams, D.G.
1994-08-01
Past attempts at sensor fusion have used some form of Boolean logic to combine the sensor information. As an alteniative, an adaptive ``fuzzy`` sensor fusion technique is described in this paper. This technique exploits the robust capabilities of fuzzy logic in the decision process as well as the optimization features of the genetic algorithm. This paper presents a brief background on fuzzy logic and genetic algorithms and how they are used in an online implementation of adaptive sensor fusion.
Genetic algorithm dose minimization for an operational layout.
McLawhorn, S. L.; Kornreich, D. E.; Dudziak, Donald J.
2002-01-01
In an effort to reduce the dose to operating technicians performing fixed-time procedures on encapsulated source material, a program has been developed to optimize the layout of workstations within a facility by use of a genetic algorithm. Taking into account the sources present at each station and the time required to complete each procedure, the program utilizes a point kernel dose calculation tool for dose estimates. The genetic algorithm driver employs the dose calculation code as a cost function to determine the optimal spatial arrangement of workstations to minimize the total worker dose.
Reactive power optimization by genetic algorithm
Iba, Kenji )
1994-05-01
This paper presents a new approach to optimal reactive power planning based on a genetic algorithm. Many outstanding methods to this problem have been proposed in the past. However, most of these approaches have the common defect of being caught to a local minimum solution. The integer problem which yields integer value solutions for discrete controllers/banks still remains as a difficult one. The genetic algorithm is a kind of search algorithm based on the mechanics of natural selection and genetics. This algorithm can search for a global solution using multiple paths and treat integer problems naturally. The proposed method was applied to practical 51-bus and 224-bus systems to show its feasibility and capabilities. Although this method is not as fast as sophisticated traditional methods, the concept is quite promising and useful.
Genetic algorithms as global random search methods
NASA Technical Reports Server (NTRS)
Peck, Charles C.; Dhawan, Atam P.
1995-01-01
Genetic algorithm behavior is described in terms of the construction and evolution of the sampling distributions over the space of candidate solutions. This novel perspective is motivated by analysis indicating that that schema theory is inadequate for completely and properly explaining genetic algorithm behavior. Based on the proposed theory, it is argued that the similarities of candidate solutions should be exploited directly, rather than encoding candidate solution and then exploiting their similarities. Proportional selection is characterized as a global search operator, and recombination is characterized as the search process that exploits similarities. Sequential algorithms and many deletion methods are also analyzed. It is shown that by properly constraining the search breadth of recombination operators, convergence of genetic algorithms to a global optimum can be ensured.
Genetic algorithms as global random search methods
NASA Technical Reports Server (NTRS)
Peck, Charles C.; Dhawan, Atam P.
1995-01-01
Genetic algorithm behavior is described in terms of the construction and evolution of the sampling distributions over the space of candidate solutions. This novel perspective is motivated by analysis indicating that the schema theory is inadequate for completely and properly explaining genetic algorithm behavior. Based on the proposed theory, it is argued that the similarities of candidate solutions should be exploited directly, rather than encoding candidate solutions and then exploiting their similarities. Proportional selection is characterized as a global search operator, and recombination is characterized as the search process that exploits similarities. Sequential algorithms and many deletion methods are also analyzed. It is shown that by properly constraining the search breadth of recombination operators, convergence of genetic algorithms to a global optimum can be ensured.
Algorithmic advances in stochastic programming
Morton, D.P.
1993-07-01
Practical planning problems with deterministic forecasts of inherently uncertain parameters often yield unsatisfactory solutions. Stochastic programming formulations allow uncertain parameters to be modeled as random variables with known distributions, but the size of the resulting mathematical programs can be formidable. Decomposition-based algorithms take advantage of special structure and provide an attractive approach to such problems. We consider two classes of decomposition-based stochastic programming algorithms. The first type of algorithm addresses problems with a ``manageable`` number of scenarios. The second class incorporates Monte Carlo sampling within a decomposition algorithm. We develop and empirically study an enhanced Benders decomposition algorithm for solving multistage stochastic linear programs within a prespecified tolerance. The enhancements include warm start basis selection, preliminary cut generation, the multicut procedure, and decision tree traversing strategies. Computational results are presented for a collection of ``real-world`` multistage stochastic hydroelectric scheduling problems. Recently, there has been an increased focus on decomposition-based algorithms that use sampling within the optimization framework. These approaches hold much promise for solving stochastic programs with many scenarios. A critical component of such algorithms is a stopping criterion to ensure the quality of the solution. With this as motivation, we develop a stopping rule theory for algorithms in which bounds on the optimal objective function value are estimated by sampling. Rules are provided for selecting sample sizes and terminating the algorithm under which asymptotic validity of confidence interval statements for the quality of the proposed solution can be verified. Issues associated with the application of this theory to two sampling-based algorithms are considered, and preliminary empirical coverage results are presented.
Combinatorial Multiobjective Optimization Using Genetic Algorithms
NASA Technical Reports Server (NTRS)
Crossley, William A.; Martin. Eric T.
2002-01-01
The research proposed in this document investigated multiobjective optimization approaches based upon the Genetic Algorithm (GA). Several versions of the GA have been adopted for multiobjective design, but, prior to this research, there had not been significant comparisons of the most popular strategies. The research effort first generalized the two-branch tournament genetic algorithm in to an N-branch genetic algorithm, then the N-branch GA was compared with a version of the popular Multi-Objective Genetic Algorithm (MOGA). Because the genetic algorithm is well suited to combinatorial (mixed discrete / continuous) optimization problems, the GA can be used in the conceptual phase of design to combine selection (discrete variable) and sizing (continuous variable) tasks. Using a multiobjective formulation for the design of a 50-passenger aircraft to meet the competing objectives of minimizing takeoff gross weight and minimizing trip time, the GA generated a range of tradeoff designs that illustrate which aircraft features change from a low-weight, slow trip-time aircraft design to a heavy-weight, short trip-time aircraft design. Given the objective formulation and analysis methods used, the results of this study identify where turboprop-powered aircraft and turbofan-powered aircraft become more desirable for the 50 seat passenger application. This aircraft design application also begins to suggest how a combinatorial multiobjective optimization technique could be used to assist in the design of morphing aircraft.
Research on Routing Selection Algorithm Based on Genetic Algorithm
NASA Astrophysics Data System (ADS)
Gao, Guohong; Zhang, Baojian; Li, Xueyong; Lv, Jinna
The hereditary algorithm is a kind of random searching and method of optimizing based on living beings natural selection and hereditary mechanism. In recent years, because of the potentiality in solving complicate problems and the successful application in the fields of industrial project, hereditary algorithm has been widely concerned by the domestic and international scholar. Routing Selection communication has been defined a standard communication model of IP version 6.This paper proposes a service model of Routing Selection communication, and designs and implements a new Routing Selection algorithm based on genetic algorithm.The experimental simulation results show that this algorithm can get more resolution at less time and more balanced network load, which enhances search ratio and the availability of network resource, and improves the quality of service.
An investigation of messy genetic algorithms
NASA Technical Reports Server (NTRS)
Goldberg, David E.; Deb, Kalyanmoy; Korb, Bradley
1990-01-01
Genetic algorithms (GAs) are search procedures based on the mechanics of natural selection and natural genetics. They combine the use of string codings or artificial chromosomes and populations with the selective and juxtapositional power of reproduction and recombination to motivate a surprisingly powerful search heuristic in many problems. Despite their empirical success, there has been a long standing objection to the use of GAs in arbitrarily difficult problems. A new approach was launched. Results to a 30-bit, order-three-deception problem were obtained using a new type of genetic algorithm called a messy genetic algorithm (mGAs). Messy genetic algorithms combine the use of variable-length strings, a two-phase selection scheme, and messy genetic operators to effect a solution to the fixed-coding problem of standard simple GAs. The results of the study of mGAs in problems with nonuniform subfunction scale and size are presented. The mGA approach is summarized, both its operation and the theory of its use. Experiments on problems of varying scale, varying building-block size, and combined varying scale and size are presented.
Stochastic search in structural optimization - Genetic algorithms and simulated annealing
NASA Technical Reports Server (NTRS)
Hajela, Prabhat
1993-01-01
An account is given of illustrative applications of genetic algorithms and simulated annealing methods in structural optimization. The advantages of such stochastic search methods over traditional mathematical programming strategies are emphasized; it is noted that these methods offer a significantly higher probability of locating the global optimum in a multimodal design space. Both genetic-search and simulated annealing can be effectively used in problems with a mix of continuous, discrete, and integer design variables.
Genetic algorithms: What computers can learn from Darwin
Walbridge, C.T. )
1989-01-01
In this article the author posits a field of computing based on the genetic algorithm. This approach to programming mimics evolution by utilizing a computer to solve problems on a trial and error basis and ascertain the best answer through natural selection of the best of the computer's guesses. The author discusses the viability of this system in comparison to that of artificial intelligence.
A Parallel Genetic Algorithm for Automated Electronic Circuit Design
NASA Technical Reports Server (NTRS)
Lohn, Jason D.; Colombano, Silvano P.; Haith, Gary L.; Stassinopoulos, Dimitris; Norvig, Peter (Technical Monitor)
2000-01-01
We describe a parallel genetic algorithm (GA) that automatically generates circuit designs using evolutionary search. A circuit-construction programming language is introduced and we show how evolution can generate practical analog circuit designs. Our system allows circuit size (number of devices), circuit topology, and device values to be evolved. We present experimental results as applied to analog filter and amplifier design tasks.
Robot path planning using a genetic algorithm
NASA Technical Reports Server (NTRS)
Cleghorn, Timothy F.; Baffes, Paul T.; Wang, Liu
1988-01-01
Robot path planning can refer either to a mobile vehicle such as a Mars Rover, or to an end effector on an arm moving through a cluttered workspace. In both instances there may exist many solutions, some of which are better than others, either in terms of distance traversed, energy expended, or joint angle or reach capabilities. A path planning program has been developed based upon a genetic algorithm. This program assumes global knowledge of the terrain or workspace, and provides a family of good paths between the initial and final points. Initially, a set of valid random paths are constructed. Successive generations of valid paths are obtained using one of several possible reproduction strategies similar to those found in biological communities. A fitness function is defined to describe the goodness of the path, in this case including length, slope, and obstacle avoidance considerations. It was found that with some reproduction strategies, the average value of the fitness function improved for successive generations, and that by saving the best paths of each generation, one could quite rapidly obtain a collection of good candidate solutions.
Equilibrium stellar systems with genetic algorithms
NASA Astrophysics Data System (ADS)
Gularte, E.; Carpintero, D. D.
In 1979, M Schwarzschild showed that it is possible to build an equilibrium triaxial stellar system. However, the linear programmation used to that goal was not able to determine the uniqueness of the solution, nor even if that solution was the optimum one. Genetic algorithms are ideal tools to find a solution to this problem. In this work, we use a genetic algorithm to reproduce an equilibrium spherical stellar system from a suitable set of predefined orbits, obtaining the best solution attainable with the provided set. FULL TEXT IN SPANISH
Genetic Algorithms for Digital Quantum Simulations
NASA Astrophysics Data System (ADS)
Las Heras, U.; Alvarez-Rodriguez, U.; Solano, E.; Sanz, M.
2016-06-01
We propose genetic algorithms, which are robust optimization techniques inspired by natural selection, to enhance the versatility of digital quantum simulations. In this sense, we show that genetic algorithms can be employed to increase the fidelity and optimize the resource requirements of digital quantum simulation protocols while adapting naturally to the experimental constraints. Furthermore, this method allows us to reduce not only digital errors but also experimental errors in quantum gates. Indeed, by adding ancillary qubits, we design a modular gate made out of imperfect gates, whose fidelity is larger than the fidelity of any of the constituent gates. Finally, we prove that the proposed modular gates are resilient against different gate errors.
Applying a Genetic Algorithm to Reconfigurable Hardware
NASA Technical Reports Server (NTRS)
Wells, B. Earl; Weir, John; Trevino, Luis; Patrick, Clint; Steincamp, Jim
2004-01-01
This paper investigates the feasibility of applying genetic algorithms to solve optimization problems that are implemented entirely in reconfgurable hardware. The paper highlights the pe$ormance/design space trade-offs that must be understood to effectively implement a standard genetic algorithm within a modem Field Programmable Gate Array, FPGA, reconfgurable hardware environment and presents a case-study where this stochastic search technique is applied to standard test-case problems taken from the technical literature. In this research, the targeted FPGA-based platform and high-level design environment was the Starbridge Hypercomputing platform, which incorporates multiple Xilinx Virtex II FPGAs, and the Viva TM graphical hardware description language.
Facial Composite System Using Genetic Algorithm
NASA Astrophysics Data System (ADS)
Zahradníková, Barbora; Duchovičová, Soňa; Schreiber, Peter
2014-12-01
The article deals with genetic algorithms and their application in face identification. The purpose of the research is to develop a free and open-source facial composite system using evolutionary algorithms, primarily processes of selection and breeding. The initial testing proved higher quality of the final composites and massive reduction in the composites processing time. System requirements were specified and future research orientation was proposed in order to improve the results.
The Applications of Genetic Algorithms in Medicine.
Ghaheri, Ali; Shoar, Saeed; Naderan, Mohammad; Hoseini, Sayed Shahabuddin
2015-11-01
A great wealth of information is hidden amid medical research data that in some cases cannot be easily analyzed, if at all, using classical statistical methods. Inspired by nature, metaheuristic algorithms have been developed to offer optimal or near-optimal solutions to complex data analysis and decision-making tasks in a reasonable time. Due to their powerful features, metaheuristic algorithms have frequently been used in other fields of sciences. In medicine, however, the use of these algorithms are not known by physicians who may well benefit by applying them to solve complex medical problems. Therefore, in this paper, we introduce the genetic algorithm and its applications in medicine. The use of the genetic algorithm has promising implications in various medical specialties including radiology, radiotherapy, oncology, pediatrics, cardiology, endocrinology, surgery, obstetrics and gynecology, pulmonology, infectious diseases, orthopedics, rehabilitation medicine, neurology, pharmacotherapy, and health care management. This review introduces the applications of the genetic algorithm in disease screening, diagnosis, treatment planning, pharmacovigilance, prognosis, and health care management, and enables physicians to envision possible applications of this metaheuristic method in their medical career.]. PMID:26676060
The Applications of Genetic Algorithms in Medicine
Ghaheri, Ali; Shoar, Saeed; Naderan, Mohammad; Hoseini, Sayed Shahabuddin
2015-01-01
A great wealth of information is hidden amid medical research data that in some cases cannot be easily analyzed, if at all, using classical statistical methods. Inspired by nature, metaheuristic algorithms have been developed to offer optimal or near-optimal solutions to complex data analysis and decision-making tasks in a reasonable time. Due to their powerful features, metaheuristic algorithms have frequently been used in other fields of sciences. In medicine, however, the use of these algorithms are not known by physicians who may well benefit by applying them to solve complex medical problems. Therefore, in this paper, we introduce the genetic algorithm and its applications in medicine. The use of the genetic algorithm has promising implications in various medical specialties including radiology, radiotherapy, oncology, pediatrics, cardiology, endocrinology, surgery, obstetrics and gynecology, pulmonology, infectious diseases, orthopedics, rehabilitation medicine, neurology, pharmacotherapy, and health care management. This review introduces the applications of the genetic algorithm in disease screening, diagnosis, treatment planning, pharmacovigilance, prognosis, and health care management, and enables physicians to envision possible applications of this metaheuristic method in their medical career.] PMID:26676060
Predicting complex mineral structures using genetic algorithms.
Mohn, Chris E; Kob, Walter
2015-10-28
We show that symmetry-adapted genetic algorithms are capable of finding the ground state of a range of complex crystalline phases including layered- and incommensurate super-structures. This opens the way for the atomistic prediction of complex crystal structures of functional materials and mineral phases. PMID:26441052
MULTIOBJECTIVE PARALLEL GENETIC ALGORITHM FOR WASTE MINIMIZATION
In this research we have developed an efficient multiobjective parallel genetic algorithm (MOPGA) for waste minimization problems. This MOPGA integrates PGAPack (Levine, 1996) and NSGA-II (Deb, 2000) with novel modifications. PGAPack is a master-slave parallel implementation of a...
Multiobjective Genetic Algorithm applied to dengue control.
Florentino, Helenice O; Cantane, Daniela R; Santos, Fernando L P; Bannwart, Bettina F
2014-12-01
Dengue fever is an infectious disease caused by a virus of the Flaviridae family and transmitted to the person by a mosquito of the genus Aedes aegypti. This disease has been a global public health problem because a single mosquito can infect up to 300 people and between 50 and 100 million people are infected annually on all continents. Thus, dengue fever is currently a subject of research, whether in the search for vaccines and treatments for the disease or efficient and economical forms of mosquito control. The current study aims to study techniques of multiobjective optimization to assist in solving problems involving the control of the mosquito that transmits dengue fever. The population dynamics of the mosquito is studied in order to understand the epidemic phenomenon and suggest strategies of multiobjective programming for mosquito control. A Multiobjective Genetic Algorithm (MGA_DENGUE) is proposed to solve the optimization model treated here and we discuss the computational results obtained from the application of this technique. PMID:25230238
Genetic Algorithms for Multiple-Choice Problems
NASA Astrophysics Data System (ADS)
Aickelin, Uwe
2010-04-01
This thesis investigates the use of problem-specific knowledge to enhance a genetic algorithm approach to multiple-choice optimisation problems.It shows that such information can significantly enhance performance, but that the choice of information and the way it is included are important factors for success.Two multiple-choice problems are considered.The first is constructing a feasible nurse roster that considers as many requests as possible.In the second problem, shops are allocated to locations in a mall subject to constraints and maximising the overall income.Genetic algorithms are chosen for their well-known robustness and ability to solve large and complex discrete optimisation problems.However, a survey of the literature reveals room for further research into generic ways to include constraints into a genetic algorithm framework.Hence, the main theme of this work is to balance feasibility and cost of solutions.In particular, co-operative co-evolution with hierarchical sub-populations, problem structure exploiting repair schemes and indirect genetic algorithms with self-adjusting decoder functions are identified as promising approaches.The research starts by applying standard genetic algorithms to the problems and explaining the failure of such approaches due to epistasis.To overcome this, problem-specific information is added in a variety of ways, some of which are designed to increase the number of feasible solutions found whilst others are intended to improve the quality of such solutions.As well as a theoretical discussion as to the underlying reasons for using each operator,extensive computational experiments are carried out on a variety of data.These show that the indirect approach relies less on problem structure and hence is easier to implement and superior in solution quality.
Fault detection using genetic programming
NASA Astrophysics Data System (ADS)
Zhang, Liang; B. Jack, Lindsay; Nandi, Asoke K.
2005-03-01
Genetic programming (GP) is a stochastic process for automatically generating computer programs. GP has been applied to a variety of problems which are too wide to reasonably enumerate. As far as the authors are aware, it has rarely been used in condition monitoring (CM). In this paper, GP is used to detect faults in rotating machinery. Featuresets from two different machines are used to examine the performance of two-class normal/fault recognition. The results are compared with a few other methods for fault detection: Artificial neural networks (ANNs) have been used in this field for many years, while support vector machines (SVMs) also offer successful solutions. For ANNs and SVMs, genetic algorithms have been used to do feature selection, which is an inherent function of GP. In all cases, the GP demonstrates performance which equals or betters that of the previous best performing approaches on these data sets. The training times are also found to be considerably shorter than the other approaches, whilst the generated classification rules are easy to understand and independently validate.
Genetic algorithms for the vehicle routing problem
NASA Astrophysics Data System (ADS)
Volna, Eva
2016-06-01
The Vehicle Routing Problem (VRP) is one of the most challenging combinatorial optimization tasks. This problem consists in designing the optimal set of routes for fleet of vehicles in order to serve a given set of customers. Evolutionary algorithms are general iterative algorithms for combinatorial optimization. These algorithms have been found to be very effective and robust in solving numerous problems from a wide range of application domains. This problem is known to be NP-hard; hence many heuristic procedures for its solution have been suggested. For such problems it is often desirable to obtain approximate solutions, so they can be found fast enough and are sufficiently accurate for the purpose. In this paper we have performed an experimental study that indicates the suitable use of genetic algorithms for the vehicle routing problem.
Production scheduling and rescheduling with genetic algorithms.
Bierwirth, C; Mattfeld, D C
1999-01-01
A general model for job shop scheduling is described which applies to static, dynamic and non-deterministic production environments. Next, a Genetic Algorithm is presented which solves the job shop scheduling problem. This algorithm is tested in a dynamic environment under different workload situations. Thereby, a highly efficient decoding procedure is proposed which strongly improves the quality of schedules. Finally, this technique is tested for scheduling and rescheduling in a non-deterministic environment. It is shown by experiment that conventional methods of production control are clearly outperformed at reasonable run-time costs. PMID:10199993
Application of Genetic Algorithms in Seismic Tomography
NASA Astrophysics Data System (ADS)
Soupios, Pantelis; Akca, Irfan; Mpogiatzis, Petros; Basokur, Ahmet; Papazachos, Constantinos
2010-05-01
In the earth sciences several inverse problems that require data fitting and parameter estimation are nonlinear and can involve a large number of unknown parameters. Consequently, the application of analytical inversion or optimization techniques may be quite restrictive. In practice, most analytical methods are local in nature and rely on a linearized form of the problem in question, adopting an iterative procedure using partial derivatives to improve an initial model. This approach can lead to a dependence of the final model solution on the starting model and is prone to entrapment in local misfit minima. Moreover, the calculation of derivatives can be computationally inefficient and create instabilities when numerical approximations are used. In contrast to these local minimization methods, global techniques that do not rely on partial derivatives, are independent of the form of the data misfit criterion, and are computationally robust. Such methods often use random processes to sample a selected wider span of the model space. In this situation, randomly generated models are assessed in terms of their data-fitting quality and the process may be stopped after a certain number of acceptable models is identified or continued until a satisfactory data fit is achieved. A new class of methods known as genetic algorithms achieves the aforementioned approximation through novel model representation and manipulations. Genetic algorithms (GAs) were originally developed in the field of artificial intelligence by John Holland more than 20 years ago, but even in this field it is less than a decade that the methodology has been more generally applied and only recently did the methodology attract the attention of the earth sciences community. Applications have been generally concentrated in geophysics and in particular seismology. As awareness of genetic algorithms grows there surely will be many more and varied applications to earth science problems. In the present work, the
Genetic algorithms for minimal source reconstructions
Lewis, P.S.; Mosher, J.C.
1993-12-01
Under-determined linear inverse problems arise in applications in which signals must be estimated from insufficient data. In these problems the number of potentially active sources is greater than the number of observations. In many situations, it is desirable to find a minimal source solution. This can be accomplished by minimizing a cost function that accounts from both the compatibility of the solution with the observations and for its ``sparseness``. Minimizing functions of this form can be a difficult optimization problem. Genetic algorithms are a relatively new and robust approach to the solution of difficult optimization problems, providing a global framework that is not dependent on local continuity or on explicit starting values. In this paper, the authors describe the use of genetic algorithms to find minimal source solutions, using as an example a simulation inspired by the reconstruction of neural currents in the human brain from magnetoencephalographic (MEG) measurements.
The genetic algorithms for trajectory optimization
NASA Astrophysics Data System (ADS)
Janin, G.; Gomez-Tierno, M. A.
1985-10-01
Possible difficulties encountered when solving space flight trajectory optimization problems are recalled. The need of a global optimization scheme is realized. Nondeterministic methods, called here stochastic methods, seem to be good candidates for solving these types of problems. A particular class of such methods, modelled upon search strategies employed in natural adaptation, is proposed here: the genetic algorithms. Two models, the mutation-selection and the crossover-selection, are discussed and remarks resulting from applications to test problems and space flight problems are made. It is concluded that a considerable effort is still needed for developing efficient schemes using genetic algorithms. However, they appear to offer an entirely original way for solving a large class of global optimization problems and they are particularly well-suited for parallel processing to be used in the fifth generation computers.
Fashion sketch design by interactive genetic algorithms
NASA Astrophysics Data System (ADS)
Mok, P. Y.; Wang, X. X.; Xu, J.; Kwok, Y. L.
2012-11-01
Computer aided design is vitally important for the modern industry, particularly for the creative industry. Fashion industry faced intensive challenges to shorten the product development process. In this paper, a methodology is proposed for sketch design based on interactive genetic algorithms. The sketch design system consists of a sketch design model, a database and a multi-stage sketch design engine. First, a sketch design model is developed based on the knowledge of fashion design to describe fashion product characteristics by using parameters. Second, a database is built based on the proposed sketch design model to define general style elements. Third, a multi-stage sketch design engine is used to construct the design. Moreover, an interactive genetic algorithm (IGA) is used to accelerate the sketch design process. The experimental results have demonstrated that the proposed method is effective in helping laypersons achieve satisfied fashion design sketches.
PSS Parameters Tuning Using Genetic Algorithm
NASA Astrophysics Data System (ADS)
Abdulrahim, M.; Almoula, Zakaria Fadl; Al-Hafid, Hafid
2008-10-01
Optimal tuning of power system stabilizer (PSS) parameters using genetic algorithm with single objective function is presented in this paper. A Single Machine Infinite Bus (SMIB) system is considered. The main objective of this research paper is to investigate the suitability of genetic algorithm for effective tuning of parameters of the power system stabilizer in a single machine infinite bus system. A conventional speed based lead-lag PSS is used. A simple and effective method of tuning the parameters of PSS is proposed which is posed as an optimization formulation by maximizing the damping of modes of oscillations of the SMIB system over a wide range of loading conditions and different system configurations. It is found that GA based PSS with single objective design shows improved dynamic performance over Conventional PSS over a wide range of operating conditions and different system parameters.
Efficient genetic algorithms using discretization scheduling.
McLay, Laura A; Goldberg, David E
2005-01-01
In many applications of genetic algorithms, there is a tradeoff between speed and accuracy in fitness evaluations when evaluations use numerical methods with varying discretization. In these types of applications, the cost and accuracy vary from discretization errors when implicit or explicit quadrature is used to estimate the function evaluations. This paper examines discretization scheduling, or how to vary the discretization within the genetic algorithm in order to use the least amount of computation time for a solution of a desired quality. The effectiveness of discretization scheduling can be determined by comparing its computation time to the computation time of a GA using a constant discretization. There are three ingredients for the discretization scheduling: population sizing, estimated time for each function evaluation and predicted convergence time analysis. Idealized one- and two-dimensional experiments and an inverse groundwater application illustrate the computational savings to be achieved from using discretization scheduling. PMID:16156928
Allocating Railway Platforms Using A Genetic Algorithm
NASA Astrophysics Data System (ADS)
Clarke, M.; Hinde, C. J.; Withall, M. S.; Jackson, T. W.; Phillips, I. W.; Brown, S.; Watson, R.
This paper describes an approach to automating railway station platform allocation. The system uses a Genetic Algorithm (GA) to find how a station’s resources should be allocated. Real data is used which needs to be transformed to be suitable for the automated system. Successful or ‘fit’ allocations provide a solution that meets the needs of the station schedule including platform re-occupation and various other constraints. The system associates the train data to derive the station requirements. The Genetic Algorithm is used to derive platform allocations. Finally, the system may be extended to take into account how further parameters that are external to the station have an effect on how an allocation should be applied. The system successfully allocates around 1000 trains to platforms in around 30 seconds requiring a genome of around 1000 genes to achieve this.
Genetic algorithms in adaptive fuzzy control
NASA Technical Reports Server (NTRS)
Karr, C. Lucas; Harper, Tony R.
1992-01-01
Researchers at the U.S. Bureau of Mines have developed adaptive process control systems in which genetic algorithms (GA's) are used to augment fuzzy logic controllers (FLC's). GA's are search algorithms that rapidly locate near-optimum solutions to a wide spectrum of problems by modeling the search procedures of natural genetics. FLC's are rule based systems that efficiently manipulate a problem environment by modeling the 'rule-of-thumb' strategy used in human decision making. Together, GA's and FLC's possess the capabilities necessary to produce powerful, efficient, and robust adaptive control systems. To perform efficiently, such control systems require a control element to manipulate the problem environment, an analysis element to recognize changes in the problem environment, and a learning element to adjust fuzzy membership functions in response to the changes in the problem environment. Details of an overall adaptive control system are discussed. A specific computer-simulated chemical system is used to demonstrate the ideas presented.
Medical image segmentation using genetic algorithms.
Maulik, Ujjwal
2009-03-01
Genetic algorithms (GAs) have been found to be effective in the domain of medical image segmentation, since the problem can often be mapped to one of search in a complex and multimodal landscape. The challenges in medical image segmentation arise due to poor image contrast and artifacts that result in missing or diffuse organ/tissue boundaries. The resulting search space is therefore often noisy with a multitude of local optima. Not only does the genetic algorithmic framework prove to be effective in coming out of local optima, it also brings considerable flexibility into the segmentation procedure. In this paper, an attempt has been made to review the major applications of GAs to the domain of medical image segmentation. PMID:19272859
Genetic Algorithms for Digital Quantum Simulations.
Las Heras, U; Alvarez-Rodriguez, U; Solano, E; Sanz, M
2016-06-10
We propose genetic algorithms, which are robust optimization techniques inspired by natural selection, to enhance the versatility of digital quantum simulations. In this sense, we show that genetic algorithms can be employed to increase the fidelity and optimize the resource requirements of digital quantum simulation protocols while adapting naturally to the experimental constraints. Furthermore, this method allows us to reduce not only digital errors but also experimental errors in quantum gates. Indeed, by adding ancillary qubits, we design a modular gate made out of imperfect gates, whose fidelity is larger than the fidelity of any of the constituent gates. Finally, we prove that the proposed modular gates are resilient against different gate errors. PMID:27341220
Predicting mining activity with parallel genetic algorithms
Talaie, S.; Leigh, R.; Louis, S.J.; Raines, G.L.
2005-01-01
We explore several different techniques in our quest to improve the overall model performance of a genetic algorithm calibrated probabilistic cellular automata. We use the Kappa statistic to measure correlation between ground truth data and data predicted by the model. Within the genetic algorithm, we introduce a new evaluation function sensitive to spatial correctness and we explore the idea of evolving different rule parameters for different subregions of the land. We reduce the time required to run a simulation from 6 hours to 10 minutes by parallelizing the code and employing a 10-node cluster. Our empirical results suggest that using the spatially sensitive evaluation function does indeed improve the performance of the model and our preliminary results also show that evolving different rule parameters for different regions tends to improve overall model performance. Copyright 2005 ACM.
Modeling a magnetostrictive transducer using genetic algorithm
NASA Astrophysics Data System (ADS)
Almeida, L. A. L.; Deep, G. S.; Lima, A. M. N.; Neff, H.
2001-05-01
This work reports on the applicability of the genetic algorithm (GA) to the problem of parameter determination of magnetostrictive transducers. A combination of the Jiles-Atherton hysteresis model with a quadratic moment rotation model is simulated using known parameters of a sensor. The simulated sensor data are then used as input data for the GA parameter calculation method. Taking the previously known parameters, the accuracy of the GA parameter calculation method can be evaluated.
Quantum-Inspired Genetic Algorithm or Quantum Genetic Algorithm: Which Is It?
NASA Astrophysics Data System (ADS)
Jones, Erika
2015-04-01
Our everyday work focuses on genetic algorithms (GAs) related to quantum computing where we call ``related'' algorithms those falling into one of two classes: (1) GAs run on classical computers but making use of quantum mechanical (QM) constructs and (2) GAs run on quantum hardware. Though convention has yet to be set with respect to usage of the accepted terms quantum-inspired genetic algorithm (QIGA) and quantum genetic algorithm (QGA), we find the two terms highly suitable respectively as labels for the aforementioned classes. With these specific definitions in mind, the difference between the QIGA and QGA is greater than might first be appreciated, particularly by those coming from a perspective emphasizing GA use as a general computational tool irrespective of QM aspects (1) suggested by QIGAs and (2) inherent in QGAs. We offer a theoretical standpoint highlighting key differences-both obvious, and more significantly, subtle-to be considered in general design of a QIGA versus that of a QGA.
A hybrid genetic algorithm for resolving closely spaced objects
NASA Technical Reports Server (NTRS)
Abbott, R. J.; Lillo, W. E.; Schulenburg, N.
1995-01-01
A hybrid genetic algorithm is described for performing the difficult optimization task of resolving closely spaced objects appearing in space based and ground based surveillance data. This application of genetic algorithms is unusual in that it uses a powerful domain-specific operation as a genetic operator. Results of applying the algorithm to real data from telescopic observations of a star field are presented.
Genetic algorithm optimization of atomic clusters
Morris, J.R.; Deaven, D.M.; Ho, K.M.; Wang, C.Z.; Pan, B.C.; Wacker, J.G.; Turner, D.E. |
1996-12-31
The authors have been using genetic algorithms to study the structures of atomic clusters and related problems. This is a problem where local minima are easy to locate, but barriers between the many minima are large, and the number of minima prohibit a systematic search. They use a novel mating algorithm that preserves some of the geometrical relationship between atoms, in order to ensure that the resultant structures are likely to inherit the best features of the parent clusters. Using this approach, they have been able to find lower energy structures than had been previously obtained. Most recently, they have been able to turn around the building block idea, using optimized structures from the GA to learn about systematic structural trends. They believe that an effective GA can help provide such heuristic information, and (conversely) that such information can be introduced back into the algorithm to assist in the search process.
Economic Dispatch Using Genetic Algorithm Based Hybrid Approach
Tahir Nadeem Malik; Aftab Ahmad; Shahab Khushnood
2006-07-01
Power Economic Dispatch (ED) is vital and essential daily optimization procedure in the system operation. Present day large power generating units with multi-valves steam turbines exhibit a large variation in the input-output characteristic functions, thus non-convexity appears in the characteristic curves. Various mathematical and optimization techniques have been developed, applied to solve economic dispatch (ED) problem. Most of these are calculus-based optimization algorithms that are based on successive linearization and use the first and second order differentiations of objective function and its constraint equations as the search direction. They usually require heat input, power output characteristics of generators to be of monotonically increasing nature or of piecewise linearity. These simplifying assumptions result in an inaccurate dispatch. Genetic algorithms have used to solve the economic dispatch problem independently and in conjunction with other AI tools and mathematical programming approaches. Genetic algorithms have inherent ability to reach the global minimum region of search space in a short time, but then take longer time to converge the solution. GA based hybrid approaches get around this problem and produce encouraging results. This paper presents brief survey on hybrid approaches for economic dispatch, an architecture of extensible computational framework as common environment for conventional, genetic algorithm and hybrid approaches based solution for power economic dispatch, the implementation of three algorithms in the developed framework. The framework tested on standard test systems for its performance evaluation. (authors)
Solving a multistage partial inspection problem using genetic algorithms
Heredia-Langner, Alejandro ); Montgomery, D C.; Carlyle, W M.
2002-01-01
Traditionally, the multistage inspection problem has been formulated as consisting of a decision schedule where some manufacturing stages receive full inspection and the rest none. Dynamic programming and heuristic methods (like local search) are the most commonly used solution techniques. A highly constrained multistage inspection problem is presented where all stages must receive partial rectifying inspection and it is solved using a real-valued genetic algorithm. This solution technique can handle multiple objectives and quality constraints effectively.
Enhanced algorithms for stochastic programming
Krishna, A.S.
1993-09-01
In this dissertation, we present some of the recent advances made in solving two-stage stochastic linear programming problems of large size and complexity. Decomposition and sampling are two fundamental components of techniques to solve stochastic optimization problems. We describe improvements to the current techniques in both these areas. We studied different ways of using importance sampling techniques in the context of Stochastic programming, by varying the choice of approximation functions used in this method. We have concluded that approximating the recourse function by a computationally inexpensive piecewise-linear function is highly efficient. This reduced the problem from finding the mean of a computationally expensive functions to finding that of a computationally inexpensive function. Then we implemented various variance reduction techniques to estimate the mean of a piecewise-linear function. This method achieved similar variance reductions in orders of magnitude less time than, when we directly applied variance-reduction techniques directly on the given problem. In solving a stochastic linear program, the expected value problem is usually solved before a stochastic solution and also to speed-up the algorithm by making use of the information obtained from the solution of the expected value problem. We have devised a new decomposition scheme to improve the convergence of this algorithm.
Using a genetic algorithm to solve fluid-flow problems
Pryor, R.J. )
1990-06-01
Genetic algorithms are based on the mechanics of the natural selection and natural genetics processes. These algorithms are finding increasing application to a wide variety of engineering optimization and machine learning problems. In this paper, the authors demonstrate the use of a genetic algorithm to solve fluid flow problems. Specifically, the authors use the algorithm to solve the one-dimensional flow equations for a pipe.
Genetic Algorithm Tuned Fuzzy Logic for Gliding Return Trajectories
NASA Technical Reports Server (NTRS)
Burchett, Bradley T.
2003-01-01
The problem of designing and flying a trajectory for successful recovery of a reusable launch vehicle is tackled using fuzzy logic control with genetic algorithm optimization. The plant is approximated by a simplified three degree of freedom non-linear model. A baseline trajectory design and guidance algorithm consisting of several Mamdani type fuzzy controllers is tuned using a simple genetic algorithm. Preliminary results show that the performance of the overall system is shown to improve with genetic algorithm tuning.
Comparison of genetic algorithms with conjugate gradient methods
NASA Technical Reports Server (NTRS)
Bosworth, J. L.; Foo, N. Y.; Zeigler, B. P.
1972-01-01
Genetic algorithms for mathematical function optimization are modeled on search strategies employed in natural adaptation. Comparisons of genetic algorithms with conjugate gradient methods, which were made on an IBM 1800 digital computer, show that genetic algorithms display superior performance over gradient methods for functions which are poorly behaved mathematically, for multimodal functions, and for functions obscured by additive random noise. Genetic methods offer performance comparable to gradient methods for many of the standard functions.
Fuzzy controller design by parallel genetic algorithms
NASA Astrophysics Data System (ADS)
Mondelli, G.; Castellano, G.; Attolico, Giovanni; Distante, Arcangelo
1998-03-01
Designing a fuzzy system involves defining membership functions and constructing rules. Carrying out these two steps manually often results in a poorly performing system. Genetic Algorithms (GAs) has proved to be a useful tool for designing optimal fuzzy controller. In order to increase the efficiency and effectiveness of their application, parallel GAs (PAGs), evolving synchronously several populations with different balances between exploration and exploitation, have been implemented using a SIMD machine (APE100/Quadrics). The parameters to be identified are coded in such a way that the algorithm implicitly provides a compact fuzzy controller, by finding only necessary rules and removing useless inputs from them. Early results, working on a fuzzy controller implementing the wall-following task for a real vehicle as a test case, provided better fitness values in less generations with respect to previous experiments made using a sequential implementation of GAs.
Genetic algorithm for disassembly process planning
NASA Astrophysics Data System (ADS)
Kongar, Elif; Gupta, Surendra M.
2002-02-01
When a product reaches its end of life, there are several options available for processing it including reuse, remanufacturing, recycling, and disposing (the least desirable option). In almost all cases, a certain level of disassembly may be necessary. Thus, finding an optimal (or near optimal) disassembly sequence is crucial to increasing the efficiency of the process. Disassembly operations are labor intensive, can be costly, have unique characteristics and cannot be considered as reverse of assembly operations. Since the complexity of determining the best disassembly sequence increases with the increase in the number of parts of the product, it is extremely crucial that an efficient methodology for disassembly process planning be developed. In this paper, we present a genetic algorithm for disassembly process planning. A case example is considered to demonstrate the functionality of the algorithm.
Dominant takeover regimes for genetic algorithms
NASA Technical Reports Server (NTRS)
Noever, David; Baskaran, Subbiah
1995-01-01
The genetic algorithm (GA) is a machine-based optimization routine which connects evolutionary learning to natural genetic laws. The present work addresses the problem of obtaining the dominant takeover regimes in the GA dynamics. Estimated GA run times are computed for slow and fast convergence in the limits of high and low fitness ratios. Using Euler's device for obtaining partial sums in closed forms, the result relaxes the previously held requirements for long time limits. Analytical solution reveal that appropriately accelerated regimes can mark the ascendancy of the most fit solution. In virtually all cases, the weak (logarithmic) dependence of convergence time on problem size demonstrates the potential for the GA to solve large N-P complete problems.
Designing conducting polymers using genetic algorithms
NASA Astrophysics Data System (ADS)
Giro, R.; Cyrillo, M.; Galvão, D. S.
2002-11-01
We have developed a new methodology to design conducting polymers with pre-specified properties. The methodology is based on the use of genetic algorithms (GAs) coupled to Negative Factor Counting technique. We present the results for a case study of polyanilines, one of the most important families of conducting polymers. The methodology proved to be able of generating automatic solutions for the problem of determining the optimum relative concentration for binary and ternary disordered polyaniline alloys exhibiting metallic properties. The methodology is completely general and can be used to design new classes of materials.
Modeling of Nonlinear Systems using Genetic Algorithm
NASA Astrophysics Data System (ADS)
Hayashi, Kayoko; Yamamoto, Toru; Kawada, Kazuo
In this paper, a newly modeling system by using Genetic Algorithm (GA) is proposed. The GA is an evolutionary computational method that simulates the mechanisms of heredity or evolution of living things, and it is utilized in optimization and in searching for optimized solutions. Most process systems have nonlinearities, so it is necessary to anticipate exactly such systems. However, it is difficult to make a suitable model for nonlinear systems, because most nonlinear systems have a complex structure. Therefore the newly proposed method of modeling for nonlinear systems uses GA. Then, according to the newly proposed scheme, the optimal structure and parameters of the nonlinear model are automatically generated.
Genetic algorithms for modelling and optimisation
NASA Astrophysics Data System (ADS)
McCall, John
2005-12-01
Genetic algorithms (GAs) are a heuristic search and optimisation technique inspired by natural evolution. They have been successfully applied to a wide range of real-world problems of significant complexity. This paper is intended as an introduction to GAs aimed at immunologists and mathematicians interested in immunology. We describe how to construct a GA and the main strands of GA theory before speculatively identifying possible applications of GAs to the study of immunology. An illustrative example of using a GA for a medical optimal control problem is provided. The paper also includes a brief account of the related area of artificial immune systems.
Applications of Genetic Programming in Cancer Research
Worzel, William P.; Yu, Jianjun; Almal, Arpit A.; Chinnaiyan, Arul M.
2012-01-01
The theory of Darwinian evolution is the fundamental keystones of modern biology. Late in the last century, computer scientists began adapting its principles, in particular natural selection, to complex computational challenges, leading to the emergence of evolutionary algorithms. The conceptual model of selective pressure and recombination in evolutionary algorithms allows scientists to efficiently search high dimensional space for solutions to complex problems. In the last decade, genetic programming has been developed and extensively applied for analysis of molecular data to classify cancer subtypes and characterize the mechanisms of cancer pathogenesis and development. This article reviews current successes using genetic programming and discusses its potential impact in cancer research and treatment in the near future. PMID:18929677
A genetic algorithm solution to the unit commitment problem
Kazarlis, S.A.; Bakirtzis, A.G.; Petridis, V.
1996-02-01
This paper presents a Genetic Algorithm (GA) solution to the Unit Commitment problem. GAs are general purpose optimization techniques based on principles inspired from the biological evolution using metaphors of mechanisms such as natural selection, genetic recombination and survival of the fittest. A simple Ga algorithm implementation using the standard crossover and mutation operators could locate near optimal solutions but in most cases failed to converge to the optimal solution. However, using the Varying Quality Function technique and adding problem specific operators, satisfactory solutions to the Unit Commitment problem were obtained. Test results for systems of up to 100 units and comparisons with results obtained using Lagrangian Relaxation and Dynamic Programming are also reported.
National Dairy Genetic Evaluation Program
Technology Transfer Automated Retrieval System (TEKTRAN)
The National Dairy Genetic Evaluation Program is a continuation of ongoing USDA collaboration with the U.S. dairy industry on genetic evaluation of dairy cattle since 1908. Data are provided by dairy records processing centers (yield, health, pedigree, and reproduction traits), breed registry societ...
Adaptive sensor tasking using genetic algorithms
NASA Astrophysics Data System (ADS)
Shea, Peter J.; Kirk, Joe; Welchons, Dave
2007-04-01
Today's battlefield environment contains a large number of sensors, and sensor types, onboard multiple platforms. The set of sensor types includes SAR, EO/IR, GMTI, AMTI, HSI, MSI, and video, and for each sensor type there may be multiple sensing modalities to select from. In an attempt to maximize sensor performance, today's sensors employ either static tasking approaches or require an operator to manually change sensor tasking operations. In a highly dynamic environment this leads to a situation whereby the sensors become less effective as the sensing environments deviates from the assumed conditions. Through a Phase I SBIR effort we developed a system architecture and a common tasking approach for solving the sensor tasking problem for a multiple sensor mix. As part of our sensor tasking effort we developed a genetic algorithm based task scheduling approach and demonstrated the ability to automatically task and schedule sensors in an end-to-end closed loop simulation. Our approach allows for multiple sensors as well as system and sensor constraints. This provides a solid foundation for our future efforts including incorporation of other sensor types. This paper will describe our approach for scheduling using genetic algorithms to solve the sensor tasking problem in the presence of resource constraints and required task linkage. We will conclude with a discussion of results for a sample problem and of the path forward.
Instrument design and optimization using genetic algorithms
Hoelzel, Robert; Bentley, Phillip M.; Fouquet, Peter
2006-10-15
This article describes the design of highly complex physical instruments by using a canonical genetic algorithm (GA). The procedure can be applied to all instrument designs where performance goals can be quantified. It is particularly suited to the optimization of instrument design where local optima in the performance figure of merit are prevalent. Here, a GA is used to evolve the design of the neutron spin-echo spectrometer WASP which is presently being constructed at the Institut Laue-Langevin, Grenoble, France. A comparison is made between this artificial intelligence approach and the traditional manual design methods. We demonstrate that the search of parameter space is more efficient when applying the genetic algorithm, and the GA produces a significantly better instrument design. Furthermore, it is found that the GA increases flexibility, by facilitating the reoptimization of the design after changes in boundary conditions during the design phase. The GA also allows the exploration of 'nonstandard' magnet coil geometries. We conclude that this technique constitutes a powerful complementary tool for the design and optimization of complex scientific apparatus, without replacing the careful thought processes employed in traditional design methods.
Optimisation of nonlinear motion cueing algorithm based on genetic algorithm
NASA Astrophysics Data System (ADS)
Asadi, Houshyar; Mohamed, Shady; Rahim Zadeh, Delpak; Nahavandi, Saeid
2015-04-01
Motion cueing algorithms (MCAs) are playing a significant role in driving simulators, aiming to deliver the most accurate human sensation to the simulator drivers compared with a real vehicle driver, without exceeding the physical limitations of the simulator. This paper provides the optimisation design of an MCA for a vehicle simulator, in order to find the most suitable washout algorithm parameters, while respecting all motion platform physical limitations, and minimising human perception error between real and simulator driver. One of the main limitations of the classical washout filters is that it is attuned by the worst-case scenario tuning method. This is based on trial and error, and is effected by driving and programmers experience, making this the most significant obstacle to full motion platform utilisation. This leads to inflexibility of the structure, production of false cues and makes the resulting simulator fail to suit all circumstances. In addition, the classical method does not take minimisation of human perception error and physical constraints into account. Production of motion cues and the impact of different parameters of classical washout filters on motion cues remain inaccessible for designers for this reason. The aim of this paper is to provide an optimisation method for tuning the MCA parameters, based on nonlinear filtering and genetic algorithms. This is done by taking vestibular sensation error into account between real and simulated cases, as well as main dynamic limitations, tilt coordination and correlation coefficient. Three additional compensatory linear blocks are integrated into the MCA, to be tuned in order to modify the performance of the filters successfully. The proposed optimised MCA is implemented in MATLAB/Simulink software packages. The results generated using the proposed method show increased performance in terms of human sensation, reference shape tracking and exploiting the platform more efficiently without reaching
Implementation of genetic algorithm for distribution systems loss minimum re-configuration
Nara, K.; Shiose, A. ); Kitagawa, M.; Ishihara, T. )
1992-08-01
In this paper, a distribution systems loss minimum reconfiguration method by genetic algorithm is proposed. The problem is a complex mixed integer programming problem and is very difficult to solve by a mathematical programming approach. A genetic algorithm (GA) is a search or optimization algorithm based on the mechanics of natural selection and natural genetics. Since GA is suitable to solve combinatorial optimization problems, it can be successfully applied to problems of loss minimum in distribution systems. Numerical examples demonstrate the validity and effectiveness of the proposed methodology.
A genetic algorithm to reduce stream channel cross section data
Berenbrock, C.
2006-01-01
A genetic algorithm (GA) was used to reduce cross section data for a hypothetical example consisting of 41 data points and for 10 cross sections on the Kootenai River. The number of data points for the Kootenai River cross sections ranged from about 500 to more than 2,500. The GA was applied to reduce the number of data points to a manageable dataset because most models and other software require fewer than 100 data points for management, manipulation, and analysis. Results indicated that the program successfully reduced the data. Fitness values from the genetic algorithm were lower (better) than those in a previous study that used standard procedures of reducing the cross section data. On average, fitnesses were 29 percent lower, and several were about 50 percent lower. Results also showed that cross sections produced by the genetic algorithm were representative of the original section and that near-optimal results could be obtained in a single run, even for large problems. Other data also can be reduced in a method similar to that for cross section data.
Multidisciplinary design optimization using genetic algorithms
NASA Astrophysics Data System (ADS)
Unal, Resit
1994-12-01
Multidisciplinary design optimization (MDO) is an important step in the conceptual design and evaluation of launch vehicles since it can have a significant impact on performance and life cycle cost. The objective is to search the system design space to determine values of design variables that optimize the performance characteristic subject to system constraints. Gradient-based optimization routines have been used extensively for aerospace design optimization. However, one limitation of gradient based optimizers is their need for gradient information. Therefore, design problems which include discrete variables can not be studied. Such problems are common in launch vehicle design. For example, the number of engines and material choices must be integer values or assume only a few discrete values. In this study, genetic algorithms are investigated as an approach to MDO problems involving discrete variables and discontinuous domains. Optimization by genetic algorithms (GA) uses a search procedure which is fundamentally different from those gradient based methods. Genetic algorithms seek to find good solutions in an efficient and timely manner rather than finding the best solution. GA are designed to mimic evolutionary selection. A population of candidate designs is evaluated at each iteration, and each individual's probability of reproduction (existence in the next generation) depends on its fitness value (related to the value of the objective function). Progress toward the optimum is achieved by the crossover and mutation operations. GA is attractive since it uses only objective function values in the search process, so gradient calculations are avoided. Hence, GA are able to deal with discrete variables. Studies report success in the use of GA for aircraft design optimization studies, trajectory analysis, space structure design and control systems design. In these studies reliable convergence was achieved, but the number of function evaluations was large compared
Multidisciplinary design optimization using genetic algorithms
NASA Technical Reports Server (NTRS)
Unal, Resit
1994-01-01
Multidisciplinary design optimization (MDO) is an important step in the conceptual design and evaluation of launch vehicles since it can have a significant impact on performance and life cycle cost. The objective is to search the system design space to determine values of design variables that optimize the performance characteristic subject to system constraints. Gradient-based optimization routines have been used extensively for aerospace design optimization. However, one limitation of gradient based optimizers is their need for gradient information. Therefore, design problems which include discrete variables can not be studied. Such problems are common in launch vehicle design. For example, the number of engines and material choices must be integer values or assume only a few discrete values. In this study, genetic algorithms are investigated as an approach to MDO problems involving discrete variables and discontinuous domains. Optimization by genetic algorithms (GA) uses a search procedure which is fundamentally different from those gradient based methods. Genetic algorithms seek to find good solutions in an efficient and timely manner rather than finding the best solution. GA are designed to mimic evolutionary selection. A population of candidate designs is evaluated at each iteration, and each individual's probability of reproduction (existence in the next generation) depends on its fitness value (related to the value of the objective function). Progress toward the optimum is achieved by the crossover and mutation operations. GA is attractive since it uses only objective function values in the search process, so gradient calculations are avoided. Hence, GA are able to deal with discrete variables. Studies report success in the use of GA for aircraft design optimization studies, trajectory analysis, space structure design and control systems design. In these studies reliable convergence was achieved, but the number of function evaluations was large compared
Training product unit neural networks with genetic algorithms
NASA Technical Reports Server (NTRS)
Janson, D. J.; Frenzel, J. F.; Thelen, D. C.
1991-01-01
The training of product neural networks using genetic algorithms is discussed. Two unusual neural network techniques are combined; product units are employed instead of the traditional summing units and genetic algorithms train the network rather than backpropagation. As an example, a neural netork is trained to calculate the optimum width of transistors in a CMOS switch. It is shown how local minima affect the performance of a genetic algorithm, and one method of overcoming this is presented.
Genetic algorithm and particle swarm optimization combined with Powell method
NASA Astrophysics Data System (ADS)
Bento, David; Pinho, Diana; Pereira, Ana I.; Lima, Rui
2013-10-01
In recent years, the population algorithms are becoming increasingly robust and easy to use, based on Darwin's Theory of Evolution, perform a search for the best solution around a population that will progress according to several generations. This paper present variants of hybrid genetic algorithm - Genetic Algorithm and a bio-inspired hybrid algorithm - Particle Swarm Optimization, both combined with the local method - Powell Method. The developed methods were tested with twelve test functions from unconstrained optimization context.
Inversion for seismic anisotropy using genetic algorithms
Horne, S. Univ. of Edinburgh . Dept. of Geology and Geophysics); MacBeth, C. . Dept. of Geology and Geophysics)
1994-11-01
A general inversion scheme based on a genetic algorithm is developed to invert seismic observations for anisotropic parameters. The technique is applied to the inversion of shear-wave observations from two azimuthal VSP data sets from the Conoco test site in Oklahoma. Horizontal polarizations and time-delays are inverted for hexagonal and orthorhombic symmetries. The model solutions are consistent with previous studies using trial and error matching of full waveform synthetics. The shear-wave splitting observations suggest the presence of a shear-wave line singularity and are consistent with a dipping fracture system which is known to exist at the test site. Application of the inversion scheme prior to full waveform modeling demonstrates that a considerable saving in time is possible while retaining the same degree of accuracy.
Genetic Algorithm Approaches to Prebiobiotic Chemistry Modeling
NASA Technical Reports Server (NTRS)
Lohn, Jason; Colombano, Silvano
1997-01-01
We model an artificial chemistry comprised of interacting polymers by specifying two initial conditions: a distribution of polymers and a fixed set of reversible catalytic reactions. A genetic algorithm is used to find a set of reactions that exhibit a desired dynamical behavior. Such a technique is useful because it allows an investigator to determine whether a specific pattern of dynamics can be produced, and if it can, the reaction network found can be then analyzed. We present our results in the context of studying simplified chemical dynamics in theorized protocells - hypothesized precursors of the first living organisms. Our results show that given a small sample of plausible protocell reaction dynamics, catalytic reaction sets can be found. We present cases where this is not possible and also analyze the evolved reaction sets.
PDE Nozzle Optimization Using a Genetic Algorithm
NASA Technical Reports Server (NTRS)
Billings, Dana; Turner, James E. (Technical Monitor)
2000-01-01
Genetic algorithms, which simulate evolution in natural systems, have been used to find solutions to optimization problems that seem intractable to standard approaches. In this study, the feasibility of using a GA to find an optimum, fixed profile nozzle for a pulse detonation engine (PDE) is demonstrated. The objective was to maximize impulse during the detonation wave passage and blow-down phases of operation. Impulse of each profile variant was obtained by using the CFD code Mozart/2.0 to simulate the transient flow. After 7 generations, the method has identified a nozzle profile that certainly is a candidate for optimum solution. The constraints on the generality of this possible solution remain to be clarified.
Birefringent filter design by use of a modified genetic algorithm.
Wen, Mengtao; Yao, Jianping
2006-06-10
A modified genetic algorithm is proposed for the optimization of fiber birefringent filters. The orientation angles and the element lengths are determined by the genetic algorithm to minimize the sidelobe levels of the filters. Being different from the normal genetic algorithm, the algorithm proposed reduces the problem space of the birefringent filter design to achieve faster speed and better performance. The design of 4-, 8-, and 14-section birefringent filters with an improved sidelobe suppression ratio is realized. A 4-section birefringent filter designed with the algorithm is experimentally realized. PMID:16761031
On the scalability of parallel genetic algorithms.
Cantú-Paz, E; Goldberg, D E
1999-01-01
This paper examines the scalability of several types of parallel genetic algorithms (GAs). The objective is to determine the optimal number of processors that can be used by each type to minimize the execution time. The first part of the paper considers algorithms with a single population. The investigation focuses on an implementation where the population is distributed to several processors, but the results are applicable to more common master-slave implementations, where the population is entirely stored in a master processor and multiple slaves are used to evaluate the fitness. The second part of the paper deals with parallel GAs with multiple populations. It first considers a bounding case where the connectivity, the migration rate, and the frequency of migrations are set to their maximal values. Then, arbitrary regular topologies with lower migration rates are considered and the frequency of migrations is set to its lowest value. The investigationis mainly theoretical, but experimental evidence with an additively-decomposable function is included to illustrate the accuracy of the theory. In all cases, the calculations show that the optimal number of processors that minimizes the execution time is directly proportional to the square root of the population size and the fitness evaluation time. Since these two factors usually increase as the domain becomes more difficult, the results of the paper suggest that parallel GAs can integrate large numbers of processors and significantly reduce the execution time of many practical applications. PMID:10578030
Spacecraft Attitude Maneuver Planning Using Genetic Algorithms
NASA Technical Reports Server (NTRS)
Kornfeld, Richard P.
2004-01-01
A key enabling technology that leads to greater spacecraft autonomy is the capability to autonomously and optimally slew the spacecraft from and to different attitudes while operating under a number of celestial and dynamic constraints. The task of finding an attitude trajectory that meets all the constraints is a formidable one, in particular for orbiting or fly-by spacecraft where the constraints and initial and final conditions are of time-varying nature. This approach for attitude path planning makes full use of a priori constraint knowledge and is computationally tractable enough to be executed onboard a spacecraft. The approach is based on incorporating the constraints into a cost function and using a Genetic Algorithm to iteratively search for and optimize the solution. This results in a directed random search that explores a large part of the solution space while maintaining the knowledge of good solutions from iteration to iteration. A solution obtained this way may be used as is or as an initial solution to initialize additional deterministic optimization algorithms. A number of representative case examples for time-fixed and time-varying conditions yielded search times that are typically on the order of minutes, thus demonstrating the viability of this method. This approach is applicable to all deep space and planet Earth missions requiring greater spacecraft autonomy, and greatly facilitates navigation and science observation planning.
A Parallel Genetic Algorithm for Automated Electronic Circuit Design
NASA Technical Reports Server (NTRS)
Long, Jason D.; Colombano, Silvano P.; Haith, Gary L.; Stassinopoulos, Dimitris
2000-01-01
issues in the GA, it is possible to have idle processors. However, as long as the load at each processing node is similar, the processors are kept busy nearly all of the time. In applying GAs to circuit design, a suitable genetic representation 'is that of a circuit-construction program. We discuss one such circuit-construction programming language and show how evolution can generate useful analog circuit designs. This language has the desirable property that virtually all sets of combinations of primitives result in valid circuit graphs. Our system allows circuit size (number of devices), circuit topology, and device values to be evolved. Using a parallel genetic algorithm and circuit simulation software, we present experimental results as applied to three analog filter and two amplifier design tasks. For example, a figure shows an 85 dB amplifier design evolved by our system, and another figure shows the performance of that circuit (gain and frequency response). In all tasks, our system is able to generate circuits that achieve the target specifications.
Self-adaptive genetic algorithms with simulated binary crossover.
Deb, K; Beyer, H G
2001-01-01
Self-adaptation is an essential feature of natural evolution. However, in the context of function optimization, self-adaptation features of evolutionary search algorithms have been explored mainly with evolution strategy (ES) and evolutionary programming (EP). In this paper, we demonstrate the self-adaptive feature of real-parameter genetic algorithms (GAs) using a simulated binary crossover (SBX) operator and without any mutation operator. The connection between the working of self-adaptive ESs and real-parameter GAs with the SBX operator is also discussed. Thereafter, the self-adaptive behavior of real-parameter GAs is demonstrated on a number of test problems commonly used in the ES literature. The remarkable similarity in the working principle of real-parameter GAs and self-adaptive ESs shown in this study suggests the need for emphasizing further studies on self-adaptive GAs. PMID:11382356
The potential of genetic algorithms for conceptual design of rotor systems
NASA Technical Reports Server (NTRS)
Crossley, William A.; Wells, Valana L.; Laananen, David H.
1993-01-01
The capabilities of genetic algorithms as a non-calculus based, global search method make them potentially useful in the conceptual design of rotor systems. Coupling reasonably simple analysis tools to the genetic algorithm was accomplished, and the resulting program was used to generate designs for rotor systems to match requirements similar to those of both an existing helicopter and a proposed helicopter design. This provides a comparison with the existing design and also provides insight into the potential of genetic algorithms in design of new rotors.
A Test of Genetic Algorithms in Relevance Feedback.
ERIC Educational Resources Information Center
Lopez-Pujalte, Cristina; Guerrero Bote, Vicente P.; Moya Anegon, Felix de
2002-01-01
Discussion of information retrieval, query optimization techniques, and relevance feedback focuses on genetic algorithms, which are derived from artificial intelligence techniques. Describes an evaluation of different genetic algorithms using a residual collection method and compares results with the Ide dec-hi method (Salton and Buckley, 1990…
Specific optimization of genetic algorithm on special algebras
NASA Astrophysics Data System (ADS)
Habiballa, Hashim; Novak, Vilem; Dyba, Martin; Schenk, Jiri
2016-06-01
Searching for complex finite algebras can be succesfully done by the means of genetic algorithm as we showed in former works. This genetic algorithm needs specific optimization of crossover and mutation. We present details about these optimizations which are already implemented in software application for this task - EQCreator.
A "Hands on" Strategy for Teaching Genetic Algorithms to Undergraduates
ERIC Educational Resources Information Center
Venables, Anne; Tan, Grace
2007-01-01
Genetic algorithms (GAs) are a problem solving strategy that uses stochastic search. Since their introduction (Holland, 1975), GAs have proven to be particularly useful for solving problems that are "intractable" using classical methods. The language of genetic algorithms (GAs) is heavily laced with biological metaphors from evolutionary…
MM Algorithms for Geometric and Signomial Programming.
Lange, Kenneth; Zhou, Hua
2014-02-01
This paper derives new algorithms for signomial programming, a generalization of geometric programming. The algorithms are based on a generic principle for optimization called the MM algorithm. In this setting, one can apply the geometric-arithmetic mean inequality and a supporting hyperplane inequality to create a surrogate function with parameters separated. Thus, unconstrained signomial programming reduces to a sequence of one-dimensional minimization problems. Simple examples demonstrate that the MM algorithm derived can converge to a boundary point or to one point of a continuum of minimum points. Conditions under which the minimum point is unique or occurs in the interior of parameter space are proved for geometric programming. Convergence to an interior point occurs at a linear rate. Finally, the MM framework easily accommodates equality and inequality constraints of signomial type. For the most important special case, constrained quadratic programming, the MM algorithm involves very simple updates. PMID:24634545
MM Algorithms for Geometric and Signomial Programming
Lange, Kenneth; Zhou, Hua
2013-01-01
This paper derives new algorithms for signomial programming, a generalization of geometric programming. The algorithms are based on a generic principle for optimization called the MM algorithm. In this setting, one can apply the geometric-arithmetic mean inequality and a supporting hyperplane inequality to create a surrogate function with parameters separated. Thus, unconstrained signomial programming reduces to a sequence of one-dimensional minimization problems. Simple examples demonstrate that the MM algorithm derived can converge to a boundary point or to one point of a continuum of minimum points. Conditions under which the minimum point is unique or occurs in the interior of parameter space are proved for geometric programming. Convergence to an interior point occurs at a linear rate. Finally, the MM framework easily accommodates equality and inequality constraints of signomial type. For the most important special case, constrained quadratic programming, the MM algorithm involves very simple updates. PMID:24634545
Advanced optimization of permanent magnet wigglers using a genetic algorithm
Hajima, Ryoichi
1995-12-31
In permanent magnet wigglers, magnetic imperfection of each magnet piece causes field error. This field error can be reduced or compensated by sorting magnet pieces in proper order. We showed a genetic algorithm has good property for this sorting scheme. In this paper, this optimization scheme is applied to the case of permanent magnets which have errors in the direction of field. The result shows the genetic algorithm is superior to other algorithms.
Transonic Wing Shape Optimization Using a Genetic Algorithm
NASA Technical Reports Server (NTRS)
Holst, Terry L.; Pulliam, Thomas H.; Kwak, Dochan (Technical Monitor)
2002-01-01
A method for aerodynamic shape optimization based on a genetic algorithm approach is demonstrated. The algorithm is coupled with a transonic full potential flow solver and is used to optimize the flow about transonic wings including multi-objective solutions that lead to the generation of pareto fronts. The results indicate that the genetic algorithm is easy to implement, flexible in application and extremely reliable.
A New Challenge for Compression Algorithms: Genetic Sequences.
ERIC Educational Resources Information Center
Grumbach, Stephane; Tahi, Fariza
1994-01-01
Analyzes the properties of genetic sequences that cause the failure of classical algorithms used for data compression. A lossless algorithm, which compresses the information contained in DNA and RNA sequences by detecting regularities such as palindromes, is presented. This algorithm combines substitutional and statistical methods and appears to…
Genetic algorithm-based form error evaluation
NASA Astrophysics Data System (ADS)
Cui, Changcai; Li, Bing; Huang, Fugui; Zhang, Rencheng
2007-07-01
Form error evaluation of geometrical products is a nonlinear optimization problem, for which a solution has been attempted by different methods with some complexity. A genetic algorithm (GA) was developed to deal with the problem, which was proved simple to understand and realize, and its key techniques have been investigated in detail. Firstly, the fitness function of GA was discussed emphatically as a bridge between GA and the concrete problems to be solved. Secondly, the real numbers-based representation of the desired solutions in the continual space optimization problem was discussed. Thirdly, many improved evolutionary strategies of GA were described on emphasis. These evolutionary strategies were the selection operation of 'odd number selection plus roulette wheel selection', the crossover operation of 'arithmetic crossover between near relatives and far relatives' and the mutation operation of 'adaptive Gaussian' mutation. After evolutions from generation to generation with the evolutionary strategies, the initial population produced stochastically around the least-squared solutions of the problem would be updated and improved iteratively till the best chromosome or individual of GA appeared. Finally, some examples were given to verify the evolutionary method. Experimental results show that the GA-based method can find desired solutions that are superior to the least-squared solutions except for a few examples in which the GA-based method can obtain similar results to those by the least-squared method. Compared with other optimization techniques, the GA-based method can obtain almost equal results but with less complicated models and computation time.
Random Volumetric MRI Trajectories via Genetic Algorithms
Curtis, Andrew Thomas; Anand, Christopher Kumar
2008-01-01
A pseudorandom, velocity-insensitive, volumetric k-space sampling trajectory is designed for use with balanced steady-state magnetic resonance imaging. Individual arcs are designed independently and do not fit together in the way that multishot spiral, radial or echo-planar trajectories do. Previously, it was shown that second-order cone optimization problems can be defined for each arc independent of the others, that nulling of zeroth and higher moments can be encoded as constraints, and that individual arcs can be optimized in seconds. For use in steady-state imaging, sampling duty cycles are predicted to exceed 95 percent. Using such pseudorandom trajectories, aliasing caused by under-sampling manifests itself as incoherent noise. In this paper, a genetic algorithm (GA) is formulated and numerically evaluated. A large set of arcs is designed using previous methods, and the GA choses particular fit subsets of a given size, corresponding to a desired acquisition time. Numerical simulations of 1 second acquisitions show good detail and acceptable noise for large-volume imaging with 32 coils. PMID:18604305
Closed Loop System Identification with Genetic Algorithms
NASA Technical Reports Server (NTRS)
Whorton, Mark S.
2004-01-01
High performance control design for a flexible space structure is challenging since high fidelity plant models are di.cult to obtain a priori. Uncertainty in the control design models typically require a very robust, low performance control design which must be tuned on-orbit to achieve the required performance. Closed loop system identi.cation is often required to obtain a multivariable open loop plant model based on closed-loop response data. In order to provide an accurate initial plant model to guarantee convergence for standard local optimization methods, this paper presents a global parameter optimization method using genetic algorithms. A minimal representation of the state space dynamics is employed to mitigate the non-uniqueness and over-parameterization of general state space realizations. This control-relevant system identi.cation procedure stresses the joint nature of the system identi.cation and control design problem by seeking to obtain a model that minimizes the di.erence between the predicted and actual closed-loop performance.
Lunar Habitat Optimization Using Genetic Algorithms
NASA Technical Reports Server (NTRS)
SanScoucie, M. P.; Hull, P. V.; Tinker, M. L.; Dozier, G. V.
2007-01-01
Long-duration surface missions to the Moon and Mars will require bases to accommodate habitats for the astronauts. Transporting the materials and equipment required to build the necessary habitats is costly and difficult. The materials chosen for the habitat walls play a direct role in protection against each of the mentioned hazards. Choosing the best materials, their configuration, and the amount required is extremely difficult due to the immense size of the design region. Clearly, an optimization method is warranted for habitat wall design. Standard optimization techniques are not suitable for problems with such large search spaces; therefore, a habitat wall design tool utilizing genetic algorithms (GAs) has been developed. GAs use a "survival of the fittest" philosophy where the most fit individuals are more likely to survive and reproduce. This habitat design optimization tool is a multiobjective formulation of up-mass, heat loss, structural analysis, meteoroid impact protection, and radiation protection. This Technical Publication presents the research and development of this tool as well as a technique for finding the optimal GA search parameters.
Genetic algorithm for bundle adjustment in aerial panoramic stitching
NASA Astrophysics Data System (ADS)
Zhang, Chunxiao; Wen, Gaojin; Wu, Chunnan; Wang, Hongmin; Shang, Zhiming; Zhang, Qian
2015-03-01
This paper presents a genetic algorithm for bundle adjustment in aerial panoramic stitching. Compared with the conventional LM (Levenberg-Marquardt) algorithm for bundle adjustment, the proposed bundle adjustment combining the genetic algorithm optimization eliminates the possibility of sticking into the local minimum, and not requires the initial estimation of desired parameters, naturally avoiding the associated steps, that includes the normalization of matches, the computation of homography transformation, the calculations of rotation transformation and the focal length. Since the proposed bundle adjustment is composed of the directional vectors of matches, taking the advantages of genetic algorithm (GA), the Jacobian matrix and the normalization of residual error are not involved in the searching process. The experiment verifies that the proposed bundle adjustment based on the genetic algorithm can yield the global solution even in the unstable aerial imaging condition.
Variable Size Genetic Network Programming
NASA Astrophysics Data System (ADS)
Katagiri, Hironobu; Hirasawa, Kotaro; Hu, Jinglu; Murata, Junichi
Genetic Network Programming (GNP) is a kind of volutionary methods, which evolves arbitrary directed graph programs. Previously, the program size of GNP was fixed. In the paper, a new method is proposed, where the program size is adaptively changed depending on the frequency of the use of nodes. To control and to decide a program size are important and difficult problems in Evolutionary Computation, especially, a well-known crossover operator tends to cause bloat. We introduce two additional operators, add operator and delete operator, that can change the number of each kind of nodes based on whether a node function is important in the environment or not. Simulation results shows that the proposed method brings about extremely better results compared with ordinary fixed size GNP.
Improving Search Properties in Genetic Programming
NASA Technical Reports Server (NTRS)
Janikow, Cezary Z.; DeWeese, Scott
1997-01-01
With the advancing computer processing capabilities, practical computer applications are mostly limited by the amount of human programming required to accomplish a specific task. This necessary human participation creates many problems, such as dramatically increased cost. To alleviate the problem, computers must become more autonomous. In other words, computers must be capable to program/reprogram themselves to adapt to changing environments/tasks/demands/domains. Evolutionary computation offers potential means, but it must be advanced beyond its current practical limitations. Evolutionary algorithms model nature. They maintain a population of structures representing potential solutions to the problem at hand. These structures undergo a simulated evolution by means of mutation, crossover, and a Darwinian selective pressure. Genetic programming (GP) is the most promising example of an evolutionary algorithm. In GP, the structures that evolve are trees, which is a dramatic departure from previously used representations such as strings in genetic algorithms. The space of potential trees is defined by means of their elements: functions, which label internal nodes, and terminals, which label leaves. By attaching semantic interpretation to those elements, trees can be interpreted as computer programs (given an interpreter), evolved architectures, etc. JSC has begun exploring GP as a potential tool for its long-term project on evolving dextrous robotic capabilities. Last year we identified representation redundancies as the primary source of inefficiency in GP. Subsequently, we proposed a method to use problem constraints to reduce those redundancies, effectively reducing GP complexity. This method was implemented afterwards at the University of Missouri. This summer, we have evaluated the payoff from using problem constraints to reduce search complexity on two classes of problems: learning boolean functions and solving the forward kinematics problem. We have also
NASA Astrophysics Data System (ADS)
Wu, Q. H.; Ma, J. T.
1993-09-01
A primary investigation into application of genetic algorithms in optimal reactive power dispatch and voltage control is presented. The application was achieved, based on (the United Kingdom) National Grid 48 bus network model, using a novel genetic search approach. Simulation results, compared with that obtained using nonlinear programming methods, are included to show the potential of applications of the genetic search methodology in power system economical and secure operations.
Genetic Network Programming with Intron-Like Nodes
NASA Astrophysics Data System (ADS)
Mabu, Shingo; Chen, Yan; Eto, Shinji; Shimada, Kaoru; Hirasawa, Kotaro
Recently, Genetic Network Programming (GNP) has been proposed, which is an extension of Genetic Algorithm(GA) and Genetic Programming(GP). GNP can make compact programs and can memorize the past history in it implicitly, because it expresses the solution by directed graphs and therefore, it can reuse the nodes. In this research, intron-like nodes are introduced for improving the performance of GNP. The aim of introducing intron-like nodes is to use every node as much as possible. It is found from simulations that the intron-like nodes are useful for improving the training speed and generalization ability.
Genetic Algorithm Based Neural Networks for Nonlinear Optimization
1994-09-28
This software develops a novel approach to nonlinear optimization using genetic algorithm based neural networks. To our best knowledge, this approach represents the first attempt at applying both neural network and genetic algorithm techniques to solve a nonlinear optimization problem. The approach constructs a neural network structure and an appropriately shaped energy surface whose minima correspond to optimal solutions of the problem. A genetic algorithm is employed to perform a parallel and powerful search ofmore » the energy surface.« less
Aerodynamic optimum design of transonic turbine cascades using Genetic Algorithms
NASA Astrophysics Data System (ADS)
Li, Jun; Feng, Zhenping; Chang, Jianzhong; Shen, Zuda
1997-06-01
This paper presents an aerodynamic optimum design method for transonic turbine cascades based on the Genetic Algorithms coupled to the inviscid flow Euler solver and the boundary-layer calculation. The Genetic Algorithms control the evolution of a population of cascades towards an optimum design. The fitness value of each string is evaluated using the flow solver. The design procedure has been developed and the behavior of the genetic algorithms has been tested. The objective functions of the design examples are the minimum mean-square deviation between the aimed pressure and computed pressure and the minimum amount of user expertise.
A genetic algorithm approach to recognition and data mining
Punch, W.F.; Goodman, E.D.; Min, Pei
1996-12-31
We review here our use of genetic algorithm (GA) and genetic programming (GP) techniques to perform {open_quotes}data mining,{close_quotes} the discovery of particular/important data within large datasets, by finding optimal data classifications using known examples. Our first experiments concentrated on the use of a K-nearest neighbor algorithm in combination with a GA. The GA selected weights for each feature so as to optimize knn classification based on a linear combination of features. This combined GA-knn approach was successfully applied to both generated and real-world data. We later extended this work by substituting a GP for the GA. The GP-knn could not only optimize data classification via linear combinations of features but also determine functional relationships among the features. This allowed for improved performance and new information on important relationships among features. We review the effectiveness of the overall approach on examples from biology and compare the effectiveness of the GA and GP.
Investigation of image feature extraction by a genetic algorithm
NASA Astrophysics Data System (ADS)
Brumby, Steven P.; Theiler, James P.; Perkins, Simon J.; Harvey, Neal R.; Szymanski, John J.; Bloch, Jeffrey J.; Mitchell, Melanie
1999-11-01
We describe the implementation and performance of a genetic algorithm which generates image feature extraction algorithms for remote sensing applications. We describe our basis set of primitive image operators and present our chromosomal representation of a complete algorithm. Our initial application has been geospatial feature extraction using publicly available multi-spectral aerial-photography data sets. We present the preliminary results of our analysis of the efficiency of the classic genetic operations of crossover and mutation for our application, and discuss our choice of evolutionary control parameters. We exhibit some of our evolved algorithms, and discuss possible avenues for future progress.
GenMin: An enhanced genetic algorithm for global optimization
NASA Astrophysics Data System (ADS)
Tsoulos, Ioannis G.; Lagaris, I. E.
2008-06-01
A new method that employs grammatical evolution and a stopping rule for finding the global minimum of a continuous multidimensional, multimodal function is considered. The genetic algorithm used is a hybrid genetic algorithm in conjunction with a local search procedure. We list results from numerical experiments with a series of test functions and we compare with other established global optimization methods. The accompanying software accepts objective functions coded either in Fortran 77 or in C++. Program summaryProgram title: GenMin Catalogue identifier: AEAR_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AEAR_v1_0.html Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 35 810 No. of bytes in distributed program, including test data, etc.: 436 613 Distribution format: tar.gz Programming language: GNU-C++, GNU-C, GNU Fortran 77 Computer: The tool is designed to be portable in all systems running the GNU C++ compiler Operating system: The tool is designed to be portable in all systems running the GNU C++ compiler RAM: 200 KB Word size: 32 bits Classification: 4.9 Nature of problem: A multitude of problems in science and engineering are often reduced to minimizing a function of many variables. There are instances that a local optimum does not correspond to the desired physical solution and hence the search for a better solution is required. Local optimization techniques are frequently trapped in local minima. Global optimization is hence the appropriate tool. For example, solving a nonlinear system of equations via optimization, employing a least squares type of objective, one may encounter many local minima that do not correspond to solutions (i.e. they are far from zero). Solution method: Grammatical evolution and a stopping rule. Running time: Depending on the
An algorithm for genetic testing of frontotemporal lobar degeneration
Rademakers, R.; Huey, E.D.; Boxer, A.L.; Mayeux, R.; Miller, B.L.; Boeve, B.F.
2011-01-01
Objective: To derive an algorithm for genetic testing of patients with frontotemporal lobar degeneration (FTLD). Methods: A literature search was performed to review the clinical and pathologic phenotypes and family history associated with each FTLD gene. Results: Based on the literature review, an algorithm was developed to allow clinicians to use the clinical and neuroimaging phenotypes of the patient and the family history and autopsy information to decide whether or not genetic testing is warranted, and if so, the order for appropriate tests. Conclusions: Recent findings in genetics, pathology, and imaging allow clinicians to use the clinical presentation of the patient with FTLD to inform genetic testing decisions. PMID:21282594
Successful technical trading agents using genetic programming.
Othling, Andrew S.; Kelly, John A.; Pryor, Richard J.; Farnsworth, Grant V.
2004-10-01
Genetic programming (GP) has proved to be a highly versatile and useful tool for identifying relationships in data for which a more precise theoretical construct is unavailable. In this project, we use a GP search to develop trading strategies for agent based economic models. These strategies use stock prices and technical indicators, such as the moving average convergence/divergence and various exponentially weighted moving averages, to generate buy and sell signals. We analyze the effect of complexity constraints on the strategies as well as the relative performance of various indicators. We also present innovations in the classical genetic programming algorithm that appear to improve convergence for this problem. Technical strategies developed by our GP algorithm can be used to control the behavior of agents in economic simulation packages, such as ASPEN-D, adding variety to the current market fundamentals approach. The exploitation of arbitrage opportunities by technical analysts may help increase the efficiency of the simulated stock market, as it does in the real world. By improving the behavior of simulated stock markets, we can better estimate the effects of shocks to the economy due to terrorism or natural disasters.
Improved genetic algorithm for fast path planning of USV
NASA Astrophysics Data System (ADS)
Cao, Lu
2015-12-01
Due to the complex constraints, more uncertain factors and critical real-time demand of path planning for USV(Unmanned Surface Vehicle), an approach of fast path planning based on voronoi diagram and improved Genetic Algorithm is proposed, which makes use of the principle of hierarchical path planning. First the voronoi diagram is utilized to generate the initial paths and then the optimal path is searched by using the improved Genetic Algorithm, which use multiprocessors parallel computing techniques to improve the traditional genetic algorithm. Simulation results verify that the optimal time is greatly reduced and path planning based on voronoi diagram and the improved Genetic Algorithm is more favorable in the real-time operation.
Optimization of computer-generated binary holograms using genetic algorithms
NASA Astrophysics Data System (ADS)
Cojoc, Dan; Alexandrescu, Adrian
1999-11-01
The aim of this paper is to compare genetic algorithms against direct point oriented coding in the design of binary phase Fourier holograms, computer generated. These are used as fan-out elements for free space optical interconnection. Genetic algorithms are optimization methods which model the natural process of genetic evolution. The configuration of the hologram is encoded to form a chromosome. To start the optimization, a population of different chromosomes randomly generated is considered. The chromosomes compete, mate and mutate until the best chromosome is obtained according to a cost function. After explaining the operators that are used by genetic algorithms, this paper presents two examples with 32 X 32 genes in a chromosome. The crossover type and the number of mutations are shown to be important factors which influence the convergence of the algorithm. GA is demonstrated to be a useful tool to design namely binary phase holograms of complicate structures.
Genetic Algorithms Applied to Multi-Objective Aerodynamic Shape Optimization
NASA Technical Reports Server (NTRS)
Holst, Terry L.
2005-01-01
A genetic algorithm approach suitable for solving multi-objective problems is described and evaluated using a series of aerodynamic shape optimization problems. Several new features including two variations of a binning selection algorithm and a gene-space transformation procedure are included. The genetic algorithm is suitable for finding Pareto optimal solutions in search spaces that are defined by any number of genes and that contain any number of local extrema. A new masking array capability is included allowing any gene or gene subset to be eliminated as decision variables from the design space. This allows determination of the effect of a single gene or gene subset on the Pareto optimal solution. Results indicate that the genetic algorithm optimization approach is flexible in application and reliable. The binning selection algorithms generally provide Pareto front quality enhancements and moderate convergence efficiency improvements for most of the problems solved.
Genetic Algorithms Applied to Multi-Objective Aerodynamic Shape Optimization
NASA Technical Reports Server (NTRS)
Holst, Terry L.
2004-01-01
A genetic algorithm approach suitable for solving multi-objective optimization problems is described and evaluated using a series of aerodynamic shape optimization problems. Several new features including two variations of a binning selection algorithm and a gene-space transformation procedure are included. The genetic algorithm is suitable for finding pareto optimal solutions in search spaces that are defined by any number of genes and that contain any number of local extrema. A new masking array capability is included allowing any gene or gene subset to be eliminated as decision variables from the design space. This allows determination of the effect of a single gene or gene subset on the pareto optimal solution. Results indicate that the genetic algorithm optimization approach is flexible in application and reliable. The binning selection algorithms generally provide pareto front quality enhancements and moderate convergence efficiency improvements for most of the problems solved.
Koza, J R
1994-01-01
The recently-developed genetic programming paradigm is used to evolve a computer program to classify a given protein segment as being a transmembrane domain or non-transmembrane area of the protein. Genetic programming starts with a primordial ooze of randomly generated computer programs composed of available programmatic ingredients and then genetically breeds the population of programs using the Darwinian principle of survival of the fittest and an analog of the naturally occurring genetic operation of crossover (sexual recombination). Automatic function definition enables genetic programming to dynamically create subroutines dynamically during the run. Genetic programming is given a training set of differently-sized protein segments and their correct classification (but no biochemical knowledge, such as hydrophobicity values). Correlation is used as the fitness measure to drive the evolutionary process. The best genetically-evolved program achieves an out-of-sample correlation of 0.968 and an out-of-sample error rate of 1.6%. This error rate is better than that reported for four other algorithms reported at the First International Conference on Intelligent Systems for Molecular Biology. Our genetically evolved program is an instance of an algorithm discovered by an automated learning paradigm that is superior to that written by human investigators. PMID:7584397
Internal quantum efficiency analysis of solar cell by genetic algorithm
Xiong, Kanglin; Yang, Hui; Lu, Shulong; Zhou, Taofei; Wang, Rongxin; Qiu, Kai; Dong, Jianrong; Jiang, Desheng
2010-11-15
To investigate factors limiting the performance of a GaAs solar cell, genetic algorithm is employed to fit the experimentally measured internal quantum efficiency (IQE) in the full spectra range. The device parameters such as diffusion lengths and surface recombination velocities are extracted. Electron beam induced current (EBIC) is performed in the base region of the cell with obtained diffusion length agreeing with the fit result. The advantage of genetic algorithm is illustrated. (author)
Superscattering of light optimized by a genetic algorithm
Mirzaei, Ali Miroshnichenko, Andrey E.; Shadrivov, Ilya V.; Kivshar, Yuri S.
2014-07-07
We analyse scattering of light from multi-layer plasmonic nanowires and employ a genetic algorithm for optimizing the scattering cross section. We apply the mode-expansion method using experimental data for material parameters to demonstrate that our genetic algorithm allows designing realistic core-shell nanostructures with the superscattering effect achieved at any desired wavelength. This approach can be employed for optimizing both superscattering and cloaking at different wavelengths in the visible spectral range.
Genetic optimization of the HSTAMIDS landmine detection algorithm
NASA Astrophysics Data System (ADS)
Konduri, Ravi K.; Solomon, Geoff Z.; DeJong, Keith; Duvoisin, Herbert A.; Bartosz, Elizabeth E.
2004-09-01
CyTerra's dual sensor HSTAMIDS system has demonstrated exceptional landmine detection capabilities in extensive government-run field tests. Further optimization of the highly successful PentAD-class algorithms for Humanitarian Demining (HD) use (to enhance detection (Pd) and to lower the false alarm rate (FAR)) may be possible. PentAD contains several input parameters, making such optimization computationally intensive. Genetic algorithm techniques, which formerly provided substantial improvement in the detection performance of the metal detector sensor algorithm alone, have been applied to optimize the numerical values of the dual-sensor algorithm parameters. Genetic algorithm techniques have also been applied to choose among several sub-models and fusion techniques to potentially train the HSTAMIDS HD system in new ways. In this presentation we discuss the performance of the resulting algorithm as applied to field data.
Application of genetic algorithms to autopiloting in aerial combat simulation
NASA Astrophysics Data System (ADS)
Kim, Dai Hyun; Erwin, Daniel A.; Kostrzewski, Andrew A.; Kim, Jeongdal; Savant, Gajendra D.
1998-10-01
An autopilot algorithm that controls a fighter aircraft in simulated aerial combat is presented. A fitness function, whose arguments are the control settings of the simulated fighter, is continuously maximized by a fuzzied genetic algorithm. Results are presented for one-to-one combat simulated on a personal computer. Generalization to many-to-many combat is discussed.
Multiple Query Evaluation Based on an Enhanced Genetic Algorithm.
ERIC Educational Resources Information Center
Tamine, Lynda; Chrisment, Claude; Boughanem, Mohand
2003-01-01
Explains the use of genetic algorithms to combine results from multiple query evaluations to improve relevance in information retrieval. Discusses niching techniques, relevance feedback techniques, and evolution heuristics, and compares retrieval results obtained by both genetic multiple query evaluation and classical single query evaluation…
Optimization of genomic selection training populations with a genetic algorithm
Technology Transfer Automated Retrieval System (TEKTRAN)
In this article, we derive a computationally efficient statistic to measure the reliability of estimates of genetic breeding values for a fixed set of genotypes based on a given training set of genotypes and phenotypes. We adopt a genetic algorithm scheme to find a training set of certain size from ...
Research on Laser Marking Speed Optimization by Using Genetic Algorithm
Wang, Dongyun; Yu, Qiwei; Zhang, Yu
2015-01-01
Laser Marking Machine is the most common coding equipment on product packaging lines. However, the speed of laser marking has become a bottleneck of production. In order to remove this bottleneck, a new method based on a genetic algorithm is designed. On the basis of this algorithm, a controller was designed and simulations and experiments were performed. The results show that using this algorithm could effectively improve laser marking efficiency by 25%. PMID:25955831
Genetic algorithm and the application for job shop group scheduling
NASA Astrophysics Data System (ADS)
Mao, Jianzhong; Wu, Zhiming
1995-08-01
Genetic algorithm (GA) is a heuristic and random search technique mimicking nature. This paper first presents the basic principle of GA, the definition and the function of the genetic operators, and the principal character of GA. On the basis of these, the paper proposes using GA as a new solution method of the job-shop group scheduling problem, discusses the coded representation method of the feasible solution, and the particular limitation to the genetic operators.
Immune allied genetic algorithm for Bayesian network structure learning
NASA Astrophysics Data System (ADS)
Song, Qin; Lin, Feng; Sun, Wei; Chang, KC
2012-06-01
Bayesian network (BN) structure learning is a NP-hard problem. In this paper, we present an improved approach to enhance efficiency of BN structure learning. To avoid premature convergence in traditional single-group genetic algorithm (GA), we propose an immune allied genetic algorithm (IAGA) in which the multiple-population and allied strategy are introduced. Moreover, in the algorithm, we apply prior knowledge by injecting immune operator to individuals which can effectively prevent degeneration. To illustrate the effectiveness of the proposed technique, we present some experimental results.
An Agent Inspired Reconfigurable Computing Implementation of a Genetic Algorithm
NASA Technical Reports Server (NTRS)
Weir, John M.; Wells, B. Earl
2003-01-01
Many software systems have been successfully implemented using an agent paradigm which employs a number of independent entities that communicate with one another to achieve a common goal. The distributed nature of such a paradigm makes it an excellent candidate for use in high speed reconfigurable computing hardware environments such as those present in modem FPGA's. In this paper, a distributed genetic algorithm that can be applied to the agent based reconfigurable hardware model is introduced. The effectiveness of this new algorithm is evaluated by comparing the quality of the solutions found by the new algorithm with those found by traditional genetic algorithms. The performance of a reconfigurable hardware implementation of the new algorithm on an FPGA is compared to traditional single processor implementations.
The Genetic Programming of Industrial Microorganisms.
ERIC Educational Resources Information Center
Hopwood, David A.
1981-01-01
Traces the development of the field of industrial microbial genetics, describing a range of techniques for genetic programing. Includes a discussion of site-directed mutagenesis, protoplast fusion, and recombinant DNA manipulations. (CS)
A genetic-based algorithm for personalized resistance training
Kiely, J; Suraci, B; Collins, DJ; de Lorenzo, D; Pickering, C; Grimaldi, KA
2016-01-01
Association studies have identified dozens of genetic variants linked to training responses and sport-related traits. However, no intervention studies utilizing the idea of personalised training based on athlete's genetic profile have been conducted. Here we propose an algorithm that allows achieving greater results in response to high- or low-intensity resistance training programs by predicting athlete's potential for the development of power and endurance qualities with the panel of 15 performance-associated gene polymorphisms. To develop and validate such an algorithm we performed two studies in independent cohorts of male athletes (study 1: athletes from different sports (n = 28); study 2: soccer players (n = 39)). In both studies athletes completed an eight-week high- or low-intensity resistance training program, which either matched or mismatched their individual genotype. Two variables of explosive power and aerobic fitness, as measured by the countermovement jump (CMJ) and aerobic 3-min cycle test (Aero3) were assessed pre and post 8 weeks of resistance training. In study 1, the athletes from the matched groups (i.e. high-intensity trained with power genotype or low-intensity trained with endurance genotype) significantly increased results in CMJ (P = 0.0005) and Aero3 (P = 0.0004). Whereas, athletes from the mismatched group (i.e. high-intensity trained with endurance genotype or low-intensity trained with power genotype) demonstrated non-significant improvements in CMJ (P = 0.175) and less prominent results in Aero3 (P = 0.0134). In study 2, soccer players from the matched group also demonstrated significantly greater (P < 0.0001) performance changes in both tests compared to the mismatched group. Among non- or low responders of both studies, 82% of athletes (both for CMJ and Aero3) were from the mismatched group (P < 0.0001). Our results indicate that matching the individual's genotype with the appropriate training modality leads to more effective
A genetic-based algorithm for personalized resistance training.
Jones, N; Kiely, J; Suraci, B; Collins, D J; de Lorenzo, D; Pickering, C; Grimaldi, K A
2016-06-01
Association studies have identified dozens of genetic variants linked to training responses and sport-related traits. However, no intervention studies utilizing the idea of personalised training based on athlete's genetic profile have been conducted. Here we propose an algorithm that allows achieving greater results in response to high- or low-intensity resistance training programs by predicting athlete's potential for the development of power and endurance qualities with the panel of 15 performance-associated gene polymorphisms. To develop and validate such an algorithm we performed two studies in independent cohorts of male athletes (study 1: athletes from different sports (n = 28); study 2: soccer players (n = 39)). In both studies athletes completed an eight-week high- or low-intensity resistance training program, which either matched or mismatched their individual genotype. Two variables of explosive power and aerobic fitness, as measured by the countermovement jump (CMJ) and aerobic 3-min cycle test (Aero3) were assessed pre and post 8 weeks of resistance training. In study 1, the athletes from the matched groups (i.e. high-intensity trained with power genotype or low-intensity trained with endurance genotype) significantly increased results in CMJ (P = 0.0005) and Aero3 (P = 0.0004). Whereas, athletes from the mismatched group (i.e. high-intensity trained with endurance genotype or low-intensity trained with power genotype) demonstrated non-significant improvements in CMJ (P = 0.175) and less prominent results in Aero3 (P = 0.0134). In study 2, soccer players from the matched group also demonstrated significantly greater (P < 0.0001) performance changes in both tests compared to the mismatched group. Among non- or low responders of both studies, 82% of athletes (both for CMJ and Aero3) were from the mismatched group (P < 0.0001). Our results indicate that matching the individual's genotype with the appropriate training modality leads to more effective
Cloud identification using genetic algorithms and massively parallel computation
NASA Technical Reports Server (NTRS)
Buckles, Bill P.; Petry, Frederick E.
1996-01-01
As a Guest Computational Investigator under the NASA administered component of the High Performance Computing and Communication Program, we implemented a massively parallel genetic algorithm on the MasPar SIMD computer. Experiments were conducted using Earth Science data in the domains of meteorology and oceanography. Results obtained in these domains are competitive with, and in most cases better than, similar problems solved using other methods. In the meteorological domain, we chose to identify clouds using AVHRR spectral data. Four cloud speciations were used although most researchers settle for three. Results were remarkedly consistent across all tests (91% accuracy). Refinements of this method may lead to more timely and complete information for Global Circulation Models (GCMS) that are prevalent in weather forecasting and global environment studies. In the oceanographic domain, we chose to identify ocean currents from a spectrometer having similar characteristics to AVHRR. Here the results were mixed (60% to 80% accuracy). Given that one is willing to run the experiment several times (say 10), then it is acceptable to claim the higher accuracy rating. This problem has never been successfully automated. Therefore, these results are encouraging even though less impressive than the cloud experiment. Successful conclusion of an automated ocean current detection system would impact coastal fishing, naval tactics, and the study of micro-climates. Finally we contributed to the basic knowledge of GA (genetic algorithm) behavior in parallel environments. We developed better knowledge of the use of subpopulations in the context of shared breeding pools and the migration of individuals. Rigorous experiments were conducted based on quantifiable performance criteria. While much of the work confirmed current wisdom, for the first time we were able to submit conclusive evidence. The software developed under this grant was placed in the public domain. An extensive user
A parallel genetic algorithm for the set partitioning problem
Levine, D.
1994-05-01
In this dissertation the author reports on his efforts to develop a parallel genetic algorithm and apply it to the solution of set partitioning problem -- a difficult combinatorial optimization problem used by many airlines as a mathematical model for flight crew scheduling. He developed a distributed steady-state genetic algorithm in conjunction with a specialized local search heuristic for solving the set partitioning problem. The genetic algorithm is based on an island model where multiple independent subpopulations each run a steady-state genetic algorithm on their subpopulation and occasionally fit strings migrate between the subpopulations. Tests on forty real-world set partitioning problems were carried out on up to 128 nodes of an IBM SP1 parallel computer. The authors found that performance, as measured by the quality of the solution found and the iteration on which it was found, improved as additional subpopulation found and the iteration on which it was found, improved as additional subpopulations were added to the computation. With larger numbers of subpopulations the genetic algorithm was regularly able to find the optimal solution to problems having up to a few thousand integer variables. In two cases, high-quality integer feasible solutions were found for problems with 36,699 and 43,749 integer variables, respectively. A notable limitation they found was the difficulty solving problems with many constraints.
Mutual information image registration based on improved bee evolutionary genetic algorithm
NASA Astrophysics Data System (ADS)
Xu, Gang; Tu, Jingzhi
2009-07-01
In recent years, the mutual information is regarded as a more efficient similarity metrics in the image registration. According to the features of mutual information image registration, the Bee Evolution Genetic Algorithm (BEGA) is chosen for optimizing parameters, which imitates swarm mating. Besides, we try our best adaptively set the initial parameters to improve the BEGA. The programming result shows the wonderful precision of the algorithm.
Virus-Evolutionary Liner Genetic Programming
NASA Astrophysics Data System (ADS)
Tamura, Kenji; Mutoh, Atsuko; Nakamura, Tsuyoshi; Itoh, Hidenori
Many kinds of evolutionary methods have been proposed. GA and GP in particular have been demonstrated its effectiveness in various problems these days, and many systems have been proposed. One is Virus-Evolutionary Genetic Algorithm (VE-GA), and the other is Linear Genetic Programming in C (LGPC). Each of systems is reported its performance. VE-GA is the coevolution system that host individual and virus individuals. That can spread schema effectively among the host individuals by using the virus infection and virus incorporation. LGPC implements the GP by representing the individuals to one dimension as if GA. LGPC can reduce a search cost of pointer and save the machine memory, and can reduce the time to implements GP programs. We proposed that a system introduce virus individuals in LGPC, and the analyzed performance of the system at two problems. Our system can spread schema among the population, and search solution effectively. The results of computer simulation show that this system can search for solution depending on LGPC applying problem's character compare with LGPC. A search cost of pointer
Liu, Dong-sheng; Fan, Shu-jiang
2014-01-01
In order to offer mobile customers better service, we should classify the mobile user firstly. Aimed at the limitations of previous classification methods, this paper puts forward a modified decision tree algorithm for mobile user classification, which introduced genetic algorithm to optimize the results of the decision tree algorithm. We also take the context information as a classification attributes for the mobile user and we classify the context into public context and private context classes. Then we analyze the processes and operators of the algorithm. At last, we make an experiment on the mobile user with the algorithm, we can classify the mobile user into Basic service user, E-service user, Plus service user, and Total service user classes and we can also get some rules about the mobile user. Compared to C4.5 decision tree algorithm and SVM algorithm, the algorithm we proposed in this paper has higher accuracy and more simplicity. PMID:24688389
A Modified Decision Tree Algorithm Based on Genetic Algorithm for Mobile User Classification Problem
Liu, Dong-sheng; Fan, Shu-jiang
2014-01-01
In order to offer mobile customers better service, we should classify the mobile user firstly. Aimed at the limitations of previous classification methods, this paper puts forward a modified decision tree algorithm for mobile user classification, which introduced genetic algorithm to optimize the results of the decision tree algorithm. We also take the context information as a classification attributes for the mobile user and we classify the context into public context and private context classes. Then we analyze the processes and operators of the algorithm. At last, we make an experiment on the mobile user with the algorithm, we can classify the mobile user into Basic service user, E-service user, Plus service user, and Total service user classes and we can also get some rules about the mobile user. Compared to C4.5 decision tree algorithm and SVM algorithm, the algorithm we proposed in this paper has higher accuracy and more simplicity. PMID:24688389
Atmospheric Downscaling using Genetic Programming
NASA Astrophysics Data System (ADS)
Zerenner, Tanja; Venema, Victor; Simmer, Clemens
2013-04-01
Coupling models for the different components of the Soil-Vegetation-Atmosphere-System requires up-and downscaling procedures. Subject of our work is the downscaling scheme used to derive high resolution forcing data for land-surface and subsurface models from coarser atmospheric model output. The current downscaling scheme [Schomburg et. al. 2010, 2012] combines a bi-quadratic spline interpolation, deterministic rules and autoregressive noise. For the development of the scheme, training and validation data sets have been created by carrying out high-resolution runs of the atmospheric model. The deterministic rules in this scheme are partly based on known physical relations and partly determined by an automated search for linear relationships between the high resolution fields of the atmospheric model output and high resolution data on surface characteristics. Up to now deterministic rules are available for downscaling surface pressure and partially, depending on the prevailing weather conditions, for near surface temperature and radiation. Aim of our work is to improve those rules and to find deterministic rules for the remaining variables, which require downscaling, e.g. precipitation or near surface specifc humidity. To accomplish that, we broaden the search by allowing for interdependencies between different atmospheric parameters, non-linear relations, non-local and time-lagged relations. To cope with the vast number of possible solutions, we use genetic programming, a method from machine learning, which is based on the principles of natural evolution. We are currently working with GPLAB, a Genetic Programming toolbox for Matlab. At first we have tested the GP system to retrieve the known physical rule for downscaling surface pressure, i.e. the hydrostatic equation, from our training data. We have found this to be a simple task to the GP system. Furthermore we have improved accuracy and efficiency of the GP solution by implementing constant variation and
On Using Surrogates with Genetic Programming.
Hildebrandt, Torsten; Branke, Jürgen
2015-01-01
One way to accelerate evolutionary algorithms with expensive fitness evaluations is to combine them with surrogate models. Surrogate models are efficiently computable approximations of the fitness function, derived by means of statistical or machine learning techniques from samples of fully evaluated solutions. But these models usually require a numerical representation, and therefore cannot be used with the tree representation of genetic programming (GP). In this paper, we present a new way to use surrogate models with GP. Rather than using the genotype directly as input to the surrogate model, we propose using a phenotypic characterization. This phenotypic characterization can be computed efficiently and allows us to define approximate measures of equivalence and similarity. Using a stochastic, dynamic job shop scenario as an example of simulation-based GP with an expensive fitness evaluation, we show how these ideas can be used to construct surrogate models and improve the convergence speed and solution quality of GP. PMID:24967694
Forecasting the solar cycle with genetic algorithms
NASA Astrophysics Data System (ADS)
Orfila, A.; Ballester, J. L.; Oliver, R.; Alvarez, A.; Tintoré, J.
2002-04-01
In the past, it has been postulated that the irregular dynamics of the solar cycle may embed a low order chaotic process (Weiss 1988, 1994; Spiegel 1994) which, if true, implies that the future behaviour of solar activity should be predictable. Here, starting from the historical record of Zürich sunspot numbers, we build a dynamical model of the solar cycle which allows us to make a long-term forecast of its behaviour. Firstly, the deterministic part of the time series has been reconstructed using the Singular Spectrum Analysis and then an evolutionary algorithm (Alvarez et al. 2001), based on Darwinian theories of natural selection and survival and ideally suited for non-linear time series, has been applied. Then, the predictive capability of the algorithm has been tested by comparing the behaviour of solar cycles 19-22 with forecasts made with the algorithm, obtaining results which show reasonable agreement with the known behaviour of those cycles. Next, the forecast of the future behaviour of solar cycle 23 has been performed and the results point out that the level of activity during this cycle will be somewhat smaller than in the two previous ones.
Community detection based on modularity and an improved genetic algorithm
NASA Astrophysics Data System (ADS)
Shang, Ronghua; Bai, Jing; Jiao, Licheng; Jin, Chao
2013-03-01
Complex networks are widely applied in every aspect of human society, and community detection is a research hotspot in complex networks. Many algorithms use modularity as the objective function, which can simplify the algorithm. In this paper, a community detection method based on modularity and an improved genetic algorithm (MIGA) is put forward. MIGA takes the modularity Q as the objective function, which can simplify the algorithm, and uses prior information (the number of community structures), which makes the algorithm more targeted and improves the stability and accuracy of community detection. Meanwhile, MIGA takes the simulated annealing method as the local search method, which can improve the ability of local search by adjusting the parameters. Compared with the state-of-art algorithms, simulation results on computer-generated and four real-world networks reflect the effectiveness of MIGA.
Distributed genetic algorithms for the floorplan design problem
NASA Technical Reports Server (NTRS)
Cohoon, James P.; Hegde, Shailesh U.; Martin, Worthy N.; Richards, Dana S.
1991-01-01
Designing a VLSI floorplan calls for arranging a given set of modules in the plane to minimize the weighted sum of area and wire-length measures. A method of solving the floorplan design problem using distributed genetic algorithms is presented. Distributed genetic algorithms, based on the paleontological theory of punctuated equilibria, offer a conceptual modification to the traditional genetic algorithms. Experimental results on several problem instances demonstrate the efficacy of this method and indicate the advantages of this method over other methods, such as simulated annealing. The method has performed better than the simulated annealing approach, both in terms of the average cost of the solutions found and the best-found solution, in almost all the problem instances tried.
A genetic algorithm approach in interface and surface structure optimization
Zhang, Jian
2010-01-01
The thesis is divided into two parts. In the first part a global optimization method is developed for the interface and surface structures optimization. Two prototype systems are chosen to be studied. One is Si[001] symmetric tilted grain boundaries and the other is Ag/Au induced Si(111) surface. It is found that Genetic Algorithm is very efficient in finding lowest energy structures in both cases. Not only existing structures in the experiments can be reproduced, but also many new structures can be predicted using Genetic Algorithm. Thus it is shown that Genetic Algorithm is a extremely powerful tool for the material structures predictions. The second part of the thesis is devoted to the explanation of an experimental observation of thermal radiation from three-dimensional tungsten photonic crystal structures. The experimental results seems astounding and confusing, yet the theoretical models in the paper revealed the physics insight behind the phenomena and can well reproduced the experimental results.
NASA Technical Reports Server (NTRS)
Rogers, David
1991-01-01
G/SPLINES are a hybrid of Friedman's Multivariable Adaptive Regression Splines (MARS) algorithm with Holland's Genetic Algorithm. In this hybrid, the incremental search is replaced by a genetic search. The G/SPLINE algorithm exhibits performance comparable to that of the MARS algorithm, requires fewer least squares computations, and allows significantly larger problems to be considered.
NASA Astrophysics Data System (ADS)
Vasant, P.; Ganesan, T.; Elamvazuthi, I.
2012-11-01
A fairly reasonable result was obtained for non-linear engineering problems using the optimization techniques such as neural network, genetic algorithms, and fuzzy logic independently in the past. Increasingly, hybrid techniques are being used to solve the non-linear problems to obtain better output. This paper discusses the use of neuro-genetic hybrid technique to optimize the geological structure mapping which is known as seismic survey. It involves the minimization of objective function subject to the requirement of geophysical and operational constraints. In this work, the optimization was initially performed using genetic programming, and followed by hybrid neuro-genetic programming approaches. Comparative studies and analysis were then carried out on the optimized results. The results indicate that the hybrid neuro-genetic hybrid technique produced better results compared to the stand-alone genetic programming method.
Programming Cells: Towardsan automated “Genetic Compiler”
Clancy, Kevin; Voigt, Christopher A.
2010-01-01
I. Summary The increasing scale and sophistication of genetic engineering will necessitate a new generation of computer-aided design (CAD). For large genetic programs, keeping track of the DNA on the level of nucleotides becomes tedious and error prone. To push the size of projects, it is important to abstract the designer from the process of part selection and optimization. The vision is to specify genetic programs in a higher-level language, which a genetic compiler could automatically convert into a DNA sequence. Steps towards this goal include: defining the semantics of the higher-level language, algorithms to select and assemble parts, and biophysical methods to link DNA sequence to function. These will be coupled to graphic design interfaces and simulation packages to aid in the prediction of program dynamics, optimize genes, and scan projects for errors. PMID:20702081
A systematic study of genetic algorithms with genotype editing
Huang, C. F.; Rocha, L. M.
2004-01-01
This paper presents our systematic study on an RNA-editing computational model of Genetic Algorithms (GA). This model is constructed based on several genetic editing characteristics that are gleaned from the RNA editing system as observed in several organisms. We have expanded the traditional Genetic Algorithm with artificial editing mechanisms as proposed by [15]. The incorporation of editing mechanisms provides a means for artificial agents with genetic descriptions to gain greater phenotypic plasticity, which may be environmentally regulated. The systematic study of this RNA-editing model has shed some light into the evolutionary implications of RNA editing and how to select proper RNA editors for design of more robust GAS. The results will also show promising applications to complex real-world problems. We expect that the framework proposed will both facilitate determining the evolutionary role of RNA editing in biology, and advance the current state of research in Evolutionary Computation.
Acoustic design of rotor blades using a genetic algorithm
NASA Technical Reports Server (NTRS)
Wells, V. L.; Han, A. Y.; Crossley, W. A.
1995-01-01
A genetic algorithm coupled with a simplified acoustic analysis was used to generate low-noise rotor blade designs. The model includes thickness, steady loading and blade-vortex interaction noise estimates. The paper presents solutions for several variations in the fitness function, including thickness noise only, loading noise only, and combinations of the noise types. Preliminary results indicate that the analysis provides reasonable assessments of the noise produced, and that genetic algorithm successfully searches for 'good' designs. The results show that, for a given required thrust coefficient, proper blade design can noticeably reduce the noise produced at some expense to the power requirements.
Use of a genetic algorithm to analyze robust stability problems
Murdock, T.M.; Schmitendorf, W.E.; Forrest, S.
1990-01-01
This note resents a genetic algorithm technique for testing the stability of a characteristic polynomial whose coefficients are functions of unknown but bounded parameters. This technique is fast and can handle a large number of parametric uncertainties. We also use this method to determine robust stability margins for uncertain polynomials. Several benchmark examples are included to illustrate the two uses of the algorithm. 27 refs., 4 figs.
Constrained minimization of smooth functions using a genetic algorithm
NASA Technical Reports Server (NTRS)
Moerder, Daniel D.; Pamadi, Bandu N.
1994-01-01
The use of genetic algorithms for minimization of differentiable functions that are subject to differentiable constraints is considered. A technique is demonstrated for converting the solution of the necessary conditions for a constrained minimum into an unconstrained function minimization. This technique is extended as a global constrained optimization algorithm. The theory is applied to calculating minimum-fuel ascent control settings for an energy state model of an aerospace plane.
Genetic algorithm for extracting rules in discrete domain
Neruda, R.
1995-09-20
We propose a genetic algorithm that evolves families of rules from a set of examples. Inputs and outputs of the problem are discrete and nominal values which makes it difficult to use alternative learning methods that implicitly regard a metric space. A way how to encode sets of rules is presented together with special variants of genetic operators suitable for this encoding. The solution found by means of this process can be used as a core of a rule-based expert system.
Polyglot Programming in Applications Used for Genetic Data Analysis
Nowak, Robert M.
2014-01-01
Applications used for the analysis of genetic data process large volumes of data with complex algorithms. High performance, flexibility, and a user interface with a web browser are required by these solutions, which can be achieved by using multiple programming languages. In this study, I developed a freely available framework for building software to analyze genetic data, which uses C++, Python, JavaScript, and several libraries. This system was used to build a number of genetic data processing applications and it reduced the time and costs of development. PMID:25197633
Polyglot programming in applications used for genetic data analysis.
Nowak, Robert M
2014-01-01
Applications used for the analysis of genetic data process large volumes of data with complex algorithms. High performance, flexibility, and a user interface with a web browser are required by these solutions, which can be achieved by using multiple programming languages. In this study, I developed a freely available framework for building software to analyze genetic data, which uses C++, Python, JavaScript, and several libraries. This system was used to build a number of genetic data processing applications and it reduced the time and costs of development. PMID:25197633
RNA-RNA interaction prediction using genetic algorithm
2014-01-01
Background RNA-RNA interaction plays an important role in the regulation of gene expression and cell development. In this process, an RNA molecule prohibits the translation of another RNA molecule by establishing stable interactions with it. In the RNA-RNA interaction prediction problem, two RNA sequences are given as inputs and the goal is to find the optimal secondary structure of two RNAs and between them. Some different algorithms have been proposed to predict RNA-RNA interaction structure. However, most of them suffer from high computational time. Results In this paper, we introduce a novel genetic algorithm called GRNAs to predict the RNA-RNA interaction. The proposed algorithm is performed on some standard datasets with appropriate accuracy and lower time complexity in comparison to the other state-of-the-art algorithms. In the proposed algorithm, each individual is a secondary structure of two interacting RNAs. The minimum free energy is considered as a fitness function for each individual. In each generation, the algorithm is converged to find the optimal secondary structure (minimum free energy structure) of two interacting RNAs by using crossover and mutation operations. Conclusions This algorithm is properly employed for joint secondary structure prediction. The results achieved on a set of known interacting RNA pairs are compared with the other related algorithms and the effectiveness and validity of the proposed algorithm have been demonstrated. It has been shown that time complexity of the algorithm in each iteration is as efficient as the other approaches. PMID:25114714
Structural pattern recognition using genetic algorithms with specialized operators.
Khoo, K G; Suganthan, P N
2003-01-01
This paper presents a genetic algorithm (GA)-based optimization procedure for structural pattern recognition in a model-based recognition system using attributed relational graph (ARG) matching technique. The objective of our work is to improve the GA-based ARG matching procedures leading to a faster convergence rate and better quality mapping between a scene ARG and a set of given model ARGs. In this study, potential solutions are represented by integer strings indicating the mapping between scene and model vertices. The fitness of each solution string is computed by accumulating the similarity between the unary and binary attributes of the matched vertex pairs. We propose novel crossover and mutation operators, specifically for this problem. With these specialized genetic operators, the proposed algorithm converges to better quality solutions at a faster rate than the standard genetic algorithm (SGA). In addition, the proposed algorithm is also capable of recognizing multiple instances of any model object. An efficient pose-clustering algorithm is used to eliminate occasional wrong mappings and to determine the presence/pose of the model in the scene. We demonstrate the superior performance of our proposed algorithm using extensive experimental results. PMID:18238167
Optimal caching algorithm based on dynamic programming
NASA Astrophysics Data System (ADS)
Guo, Changjie; Xiang, Zhe; Zhong, Yuzhuo; Long, Jidong
2001-07-01
With the dramatic growth of multimedia streams, the efficient distribution of stored videos has become a major concern. There are two basic caching strategies: the whole caching strategy and the caching strategy based on layered encoded video, the latter can satisfy the requirement of the highly heterogeneous access to the Internet. Conventional caching strategies assign each object a cache gain by calculating popularity or density popularity, and determine which videos and which layers should be cached. In this paper, we first investigate the delivery model of stored video based on proxy, and propose two novel caching algorithms, DPLayer (for layered encoded caching scheme) and DPWhole (for whole caching scheme) for multimedia proxy caching. The two algorithms are based on the resource allocation model of dynamic programming to select the optimal subset of objects to be cached in proxy. Simulation proved that our algorithms achieve better performance than other existing schemes. We also analyze the computational complexity and space complexity of the algorithms, and introduce a regulative parameter to compress the states space of the dynamic programming problem and reduce the complexity of algorithms.
Genetic Algorithm-Based Test Data Generation for Multiple Paths via Individual Sharing
Gong, Dunwei
2014-01-01
The application of genetic algorithms in automatically generating test data has aroused broad concerns and obtained delightful achievements in recent years. However, the efficiency of genetic algorithm-based test data generation for path testing needs to be further improved. In this paper, we establish a mathematical model of generating test data for multiple paths coverage. Then, a multipopulation genetic algorithm with individual sharing is presented to solve the established model. We not only analyzed the performance of the proposed method theoretically, but also applied it to various programs under test. The experimental results show that the proposed method can improve the efficiency of generating test data for many paths' coverage significantly. PMID:25691894
Biased Random-Key Genetic Algorithms for the Winner Determination Problem in Combinatorial Auctions.
de Andrade, Carlos Eduardo; Toso, Rodrigo Franco; Resende, Mauricio G C; Miyazawa, Flávio Keidi
2015-01-01
In this paper we address the problem of picking a subset of bids in a general combinatorial auction so as to maximize the overall profit using the first-price model. This winner determination problem assumes that a single bidding round is held to determine both the winners and prices to be paid. We introduce six variants of biased random-key genetic algorithms for this problem. Three of them use a novel initialization technique that makes use of solutions of intermediate linear programming relaxations of an exact mixed integer linear programming model as initial chromosomes of the population. An experimental evaluation compares the effectiveness of the proposed algorithms with the standard mixed linear integer programming formulation, a specialized exact algorithm, and the best-performing heuristics proposed for this problem. The proposed algorithms are competitive and offer strong results, mainly for large-scale auctions. PMID:25299242
Genetic algorithms, path relinking, and the flowshop sequencing problem.
Reeves, C R; Yamada, T
1998-01-01
In a previous paper, a simple genetic algorithm (GA) was developed for finding (approximately) the minimum makespan of the n-job, m-machine permutation flowshop sequencing problem (PFSP). The performance of the algorithm was comparable to that of a naive neighborhood search technique and a proven simulated annealing algorithm. However, recent results have demonstrated the superiority of a tabu search method in solving the PFSP. In this paper, we reconsider the implementation of a GA for this problem and show that by taking into account the features of the landscape generated by the operators used, we are able to improve its performance significantly. PMID:10021740
Genetic algorithm for chromaticity correction in diffraction limited storage rings
NASA Astrophysics Data System (ADS)
Ehrlichman, M. P.
2016-04-01
A multiobjective genetic algorithm is developed for optimizing nonlinearities in diffraction limited storage rings. This algorithm determines sextupole and octupole strengths for chromaticity correction that deliver optimized dynamic aperture and beam lifetime. The algorithm makes use of dominance constraints to breed desirable properties into the early generations. The momentum aperture is optimized indirectly by constraining the chromatic tune footprint and optimizing the off-energy dynamic aperture. The result is an effective and computationally efficient technique for correcting chromaticity in a storage ring while maintaining optimal dynamic aperture and beam lifetime.
Genetic-Annealing Algorithm in Grid Environment for Scheduling Problems
NASA Astrophysics Data System (ADS)
Cruz-Chávez, Marco Antonio; Rodríguez-León, Abelardo; Ávila-Melgar, Erika Yesenia; Juárez-Pérez, Fredy; Cruz-Rosales, Martín H.; Rivera-López, Rafael
This paper presents a parallel hybrid evolutionary algorithm executed in a grid environment. The algorithm executes local searches using simulated annealing within a Genetic Algorithm to solve the job shop scheduling problem. Experimental results of the algorithm obtained in the "Tarantula MiniGrid" are shown. Tarantula was implemented by linking two clusters from different geographic locations in Mexico (Morelos-Veracruz). The technique used to link the two clusters and configure the Tarantula MiniGrid is described. The effects of latency in communication between the two clusters are discussed. It is shown that the evolutionary algorithm presented is more efficient working in Grid environments because it can carry out major exploration and exploitation of the solution space.
The study of Genetic Algorithm by Hierarchical Coded for the MMRCPSP
NASA Astrophysics Data System (ADS)
Shi-man, Xie; Chen, Jian-wei; Xuan, Zhao-yan
In order to solve the problem of Multi-Mode Resource Constrained Project Scheduling Problem (MMRCPSP), this paper suggests Genetic Algorithm (GA) by hierarchical coded. In the first layer, the chromosomes are used to choose the activity sequence. In the second layer, the chromosomes are used to decide the combination of activity modes. The chromosomes produced by the Activities Resource Competition Relation (ARCR) are coded by binary code. That is to say, the subsequent operation will be improved by mature algorithm including selection, crossover and mutation. Finally, programing used PSBLIB standard data shows that this algorithm is feasible.
Filter Circuit Design by Parallel Genetic Programming
NASA Astrophysics Data System (ADS)
Yano, Yuichi; Kato, Toshiji; Inoue, Kaoru; Miki, Mitsunori
Genetic Programming (GP) is an extension of Genetic Algorithm(GA) to handle more structural problems. In this paper, an approach to filter circuit design by GP is proposed. By designing a gene which includes not only the parameters of consisting elements, but also the structural information of the circuit, it becomes possible to apply the proposed approach to various types of filter circuits. GP depends much on trial and error due to its probabilitic nature. To decrease this uncertainty and ensure the progress of the evolution, Parallel GP with multiple populations with the island model is also proposed. An MPI-based cluster system is used for realization of this parallel computing where each island correspondsd to each node. A lowpass and an asymmetric bandpass filters are designed. One hundred times of trials for multiple populations with and without migrations are tested in the design of lowpass filter to confirm the validity of the proposed method. In the asymmetric bandpass filter design, the results are compared with those of the circuit designed by hand to confirm the effectiveness of the proposed method. The proposed approach is applicable to various types of filter circuits. It can contribute to an automated design procedure, where it would require a expirenced designer if done by hand. It is also possible to obtain a new circuit design which would not be possible if done by hand.
The multi-niche crowding genetic algorithm: Analysis and applications
Cedeno, W.
1995-09-01
The ability of organisms to evolve and adapt to the environment has provided mother nature with a rich and diverse set of species. Only organisms well adapted to their environment can survive from one generation to the next, transferring on the traits, that made them successful, to their offspring. Competition for resources and the ever changing environment drives some species to extinction and at the same time others evolve to maintain the delicate balance in nature. In this disertation we present the multi-niche crowding genetic algorithm, a computational metaphor to the survival of species in ecological niches in the face of competition. The multi-niche crowding genetic algorithm maintains stable subpopulations of solutions in multiple niches in multimodal landscapes. The algorithm introduces the concept of crowding selection to promote mating among members with qirnilar traits while allowing many members of the population to participate in mating. The algorithm uses worst among most similar replacement policy to promote competition among members with similar traits while allowing competition among members of different niches as well. We present empirical and theoretical results for the success of the multiniche crowding genetic algorithm for multimodal function optimization. The properties of the algorithm using different parameters are examined. We test the performance of the algorithm on problems of DNA Mapping, Aquifer Management, and the File Design Problem. Applications that combine the use of heuristics and special operators to solve problems in the areas of combinatorial optimization, grouping, and multi-objective optimization. We conclude by presenting the advantages and disadvantages of the algorithm and describing avenues for future investigation to answer other questions raised by this study.
Hybrid methods using genetic algorithms for global optimization.
Renders, J M; Flasse, S P
1996-01-01
This paper discusses the trade-off between accuracy, reliability and computing time in global optimization. Particular compromises provided by traditional methods (Quasi-Newton and Nelder-Mead's simplex methods) and genetic algorithms are addressed and illustrated by a particular application in the field of nonlinear system identification. Subsequently, new hybrid methods are designed, combining principles from genetic algorithms and "hill-climbing" methods in order to find a better compromise to the trade-off. Inspired by biology and especially by the manner in which living beings adapt themselves to their environment, these hybrid methods involve two interwoven levels of optimization, namely evolution (genetic algorithms) and individual learning (Quasi-Newton), which cooperate in a global process of optimization. One of these hybrid methods appears to join the group of state-of-the-art global optimization methods: it combines the reliability properties of the genetic algorithms with the accuracy of Quasi-Newton method, while requiring a computation time only slightly higher than the latter. PMID:18263027
Experiences with the PGAPack Parallel Genetic Algorithm library
Levine, D.; Hallstrom, P.; Noelle, D.; Walenz, B.
1997-07-01
PGAPack is the first widely distributed parallel genetic algorithm library. Since its release, several thousand copies have been distributed worldwide to interested users. In this paper we discuss the key components of the PGAPack design philosophy and present a number of application examples that use PGAPack.
USING GENETIC ALGORITHMS TO DESIGN ENVIRONMENTALLY FRIENDLY PROCESSES
Genetic algorithm calculations are applied to the design of chemical processes to achieve improvements in environmental and economic performance. By finding the set of Pareto (i.e., non-dominated) solutions one can see how different objectives, such as environmental and economic ...
Optimization of reliability allocation strategies through use of genetic algorithms
Campbell, J.E.; Painton, L.A.
1996-08-01
This paper examines a novel optimization technique called genetic algorithms and its application to the optimization of reliability allocation strategies. Reliability allocation should occur in the initial stages of design, when the objective is to determine an optimal breakdown or allocation of reliability to certain components or subassemblies in order to meet system specifications. The reliability allocation optimization is applied to the design of a cluster tool, a highly complex piece of equipment used in semiconductor manufacturing. The problem formulation is presented, including decision variables, performance measures and constraints, and genetic algorithm parameters. Piecewise ``effort curves`` specifying the amount of effort required to achieve a certain level of reliability for each component of subassembly are defined. The genetic algorithm evolves or picks those combinations of ``effort`` or reliability levels for each component which optimize the objective of maximizing Mean Time Between Failures while staying within a budget. The results show that the genetic algorithm is very efficient at finding a set of robust solutions. A time history of the optimization is presented, along with histograms or the solution space fitness, MTBF, and cost for comparative purposes.
Crossover Improvement for the Genetic Algorithm in Information Retrieval.
ERIC Educational Resources Information Center
Vrajitoru, Dana
1998-01-01
In information retrieval (IR), the aim of genetic algorithms (GA) is to help a system to find, in a huge documents collection, a good reply to a query expressed by the user. Analysis of phenomena seen during the implementation of a GA for IR has led to a new crossover operation, which is introduced and compared to other learning methods.…
Applying Genetic Algorithms To Query Optimization in Document Retrieval.
ERIC Educational Resources Information Center
Horng, Jorng-Tzong; Yeh, Ching-Chang
2000-01-01
Proposes a novel approach to automatically retrieve keywords and then uses genetic algorithms to adapt the keyword weights. Discusses Chinese text retrieval, term frequency rating formulas, vector space models, bigrams, the PAT-tree structure for information retrieval, query vectors, and relevance feedback. (Author/LRW)
A parallel genetic algorithm for the set partitioning problem
Levine, D.
1996-12-31
This paper describes a parallel genetic algorithm developed for the solution of the set partitioning problem- a difficult combinatorial optimization problem used by many airlines as a mathematical model for flight crew scheduling. The genetic algorithm is based on an island model where multiple independent subpopulations each run a steady-state genetic algorithm on their own subpopulation and occasionally fit strings migrate between the subpopulations. Tests on forty real-world set partitioning problems were carried out on up to 128 nodes of an IBM SP1 parallel computer. We found that performance, as measured by the quality of the solution found and the iteration on which it was found, improved as additional subpopulations were added to the computation. With larger numbers of subpopulations the genetic algorithm was regularly able to find the optimal solution to problems having up to a few thousand integer variables. In two cases, high- quality integer feasible solutions were found for problems with 36, 699 and 43,749 integer variables, respectively. A notable limitation we found was the difficulty solving problems with many constraints.
Concurrent genetic algorithms for optimization of large structures
Adeli, H.; Cheng, N. )
1994-07-01
In a recent article, the writers presented an augmented Lagrangian genetic algorithm for optimization of structures. The optimization of large structures such as high-rise building structures and space stations with several hundred members by the hybrid genetic algorithm requires the creation of thousands of strings in the population and the corresponding large number of structural analyses. In this paper, the writers extend their previous work by presenting two concurrent augmented Lagrangian genetic algorithms for optimization of large structures utilizing the multiprocessing capabilities of high-performance computers such as the Cray Y-MP 8/864 supercomputer. Efficiency of the algorithms has been investigated by applying them to four space structures including two high-rise building structures. It is observed that the performance of both algorithms improves with the size of the structure, making them particularly suitable for optimization of large structures. A maximum parallel processing speed of 7.7 is achieved for a 35-story tower (with 1,262 elements and 936 degrees of freedom), using eight processors. 9 refs.
Optimization of phononic filters via genetic algorithms
NASA Astrophysics Data System (ADS)
Hussein, M. I.; El-Beltagy, M. A.
2007-12-01
A phononic crystal is commonly characterized by its dispersive frequency spectrum. With appropriate spatial distribution of the constituent material phases, spectral stop bands could be generated. Moreover, it is possible to control the number, the width, and the location of these bands within a frequency range of interest. This study aims at exploring the relationship between unit cell configuration and frequency spectrum characteristics. Focusing on 1D layered phononic crystals, and longitudinal wave propagation in the direction normal to the layering, the unit cell features of interest are the number of layers and the material phase and relative thickness of each layer. An evolutionary search for binary- and ternary-phase cell designs exhibiting a series of stop bands at predetermined frequencies is conducted. A specially formulated representation and set of genetic operators that break the symmetries in the problem are developed for this purpose. An array of optimal designs for a range of ratios in Young's modulus and density are obtained and the corresponding objective values (the degrees to which the resulting bands match the predetermined targets) are examined as a function of these ratios. It is shown that a rather complex filtering objective could be met with a high degree of success. Structures composed of the designed phononic crystals are excellent candidates for use in a wide range of applications including sound and vibration filtering.
An Adaptive Immune Genetic Algorithm for Edge Detection
NASA Astrophysics Data System (ADS)
Li, Ying; Bai, Bendu; Zhang, Yanning
An adaptive immune genetic algorithm (AIGA) based on cost minimization technique method for edge detection is proposed. The proposed AIGA recommends the use of adaptive probabilities of crossover, mutation and immune operation, and a geometric annealing schedule in immune operator to realize the twin goals of maintaining diversity in the population and sustaining the fast convergence rate in solving the complex problems such as edge detection. Furthermore, AIGA can effectively exploit some prior knowledge and information of the local edge structure in the edge image to make vaccines, which results in much better local search ability of AIGA than that of the canonical genetic algorithm. Experimental results on gray-scale images show the proposed algorithm perform well in terms of quality of the final edge image, rate of convergence and robustness to noise.
Virus evolutionary genetic algorithm for task collaboration of logistics distribution
NASA Astrophysics Data System (ADS)
Ning, Fanghua; Chen, Zichen; Xiong, Li
2005-12-01
In order to achieve JIT (Just-In-Time) level and clients' maximum satisfaction in logistics collaboration, a Virus Evolutionary Genetic Algorithm (VEGA) was put forward under double constraints of logistics resource and operation sequence. Based on mathematic description of a multiple objective function, the algorithm was designed to schedule logistics tasks with different due dates and allocate them to network members. By introducing a penalty item, make span and customers' satisfaction were expressed in fitness function. And a dynamic adaptive probability of infection was used to improve performance of local search. Compared to standard Genetic Algorithm (GA), experimental result illustrates the performance superiority of VEGA. So the VEGA can provide a powerful decision-making technique for optimizing resource configuration in logistics network.
Study of genetic direct search algorithms for function optimization
NASA Technical Reports Server (NTRS)
Zeigler, B. P.
1974-01-01
The results are presented of a study to determine the performance of genetic direct search algorithms in solving function optimization problems arising in the optimal and adaptive control areas. The findings indicate that: (1) genetic algorithms can outperform standard algorithms in multimodal and/or noisy optimization situations, but suffer from lack of gradient exploitation facilities when gradient information can be utilized to guide the search. (2) For large populations, or low dimensional function spaces, mutation is a sufficient operator. However for small populations or high dimensional functions, crossover applied in about equal frequency with mutation is an optimum combination. (3) Complexity, in terms of storage space and running time, is significantly increased when population size is increased or the inversion operator, or the second level adaptation routine is added to the basic structure.
Large-scale sequential quadratic programming algorithms
Eldersveld, S.K.
1992-09-01
The problem addressed is the general nonlinear programming problem: finding a local minimizer for a nonlinear function subject to a mixture of nonlinear equality and inequality constraints. The methods studied are in the class of sequential quadratic programming (SQP) algorithms, which have previously proved successful for problems of moderate size. Our goal is to devise an SQP algorithm that is applicable to large-scale optimization problems, using sparse data structures and storing less curvature information but maintaining the property of superlinear convergence. The main features are: 1. The use of a quasi-Newton approximation to the reduced Hessian of the Lagrangian function. Only an estimate of the reduced Hessian matrix is required by our algorithm. The impact of not having available the full Hessian approximation is studied and alternative estimates are constructed. 2. The use of a transformation matrix Q. This allows the QP gradient to be computed easily when only the reduced Hessian approximation is maintained. 3. The use of a reduced-gradient form of the basis for the null space of the working set. This choice of basis is more practical than an orthogonal null-space basis for large-scale problems. The continuity condition for this choice is proven. 4. The use of incomplete solutions of quadratic programming subproblems. Certain iterates generated by an active-set method for the QP subproblem are used in place of the QP minimizer to define the search direction for the nonlinear problem. An implementation of the new algorithm has been obtained by modifying the code MINOS. Results and comparisons with MINOS and NPSOL are given for the new algorithm on a set of 92 test problems.
Scheduling trucks in container terminals using a genetic algorithm
NASA Astrophysics Data System (ADS)
Ng, W. C.; Mak, K. L.; Zhang, Y. X.
2007-01-01
Trucks are the most popular transport equipment in most mega-terminals, and scheduling them to minimize makespan is a challenge that this article addresses and attempts to resolve. Specifically, the problem of scheduling a fleet of trucks to perform a set of transportation jobs with sequence-dependent processing times and different ready times is investigated, and the use of a genetic algorithm (GA) to address the scheduling problem is proposed. The scheduling problem is formulated as a mixed integer program. It is noted that the scheduling problem is NP-hard and the computational effort required to solve even small-scale test problems is prohibitively large. A crossover scheme has been developed for the proposed GA. Computational experiments are carried out to compare the performance of the proposed GA with that of GAs using six popular crossover schemes. Computational results show that the proposed GA performs best, with its solutions on average 4.05% better than the best solutions found by the other six GAs.
Genetic Algorithm (GA)-Based Inclinometer Layout Optimization.
Liang, Weijie; Zhang, Ping; Chen, Xianping; Cai, Miao; Yang, Daoguo
2015-01-01
This paper presents numerical simulation results of an airflow inclinometer with sensitivity studies and thermal optimization of the printed circuit board (PCB) layout for an airflow inclinometer based on a genetic algorithm (GA). Due to the working principle of the gas sensor, the changes of the ambient temperature may cause dramatic voltage drifts of sensors. Therefore, eliminating the influence of the external environment for the airflow is essential for the performance and reliability of an airflow inclinometer. In this paper, the mechanism of an airflow inclinometer and the influence of different ambient temperatures on the sensitivity of the inclinometer will be examined by the ANSYS-FLOTRAN CFD program. The results show that with changes of the ambient temperature on the sensing element, the sensitivity of the airflow inclinometer is inversely proportional to the ambient temperature and decreases when the ambient temperature increases. GA is used to optimize the PCB thermal layout of the inclinometer. The finite-element simulation method (ANSYS) is introduced to simulate and verify the results of our optimal thermal layout, and the results indicate that the optimal PCB layout greatly improves (by more than 50%) the sensitivity of the inclinometer. The study may be useful in the design of PCB layouts that are related to sensitivity improvement of gas sensors. PMID:25897500
Applying fuzzy theory and genetic algorithm to interpolate precipitation
NASA Astrophysics Data System (ADS)
Chang, C. L.; Lo, S. L.; Yu, S. L.
2005-11-01
A watershed management program is usually based on the results of watershed modeling. Accurate modeling results are decided by the appropriate parameters and input data. Rainfall is the most important input for watershed modeling. Precipitation characteristics, such as rainfall intensity and duration, usually exhibit significant spatial variation, even within small watersheds. Therefore, properly describing the spatial variation of rainfall is essential for predicting the water movement in a watershed. Varied circumstances require a variety of suitable methods for interpolating and estimating precipitation. In this study, a modified method, combining the inverse distance method and fuzzy theory, was applied to precipitation interpolation. Meanwhile, genetic algorithm (GA) was used to determine the parameters of fuzzy membership functions, which represent the relationship between the location without rainfall records and its surrounding rainfall gauges. The objective in the optimization process is to minimize the estimated error of precipitation. The results show that the estimated error is usually reduced by this method. Particularly, when there are large and irregular elevation differences between the interpolated area and its vicinal rainfall gauging stations, it is important to consider the effect of elevation differences, in addition to the effect of horizontal distances. Reliable modeling results can substantially lower the cost for the watershed management strategy.
Genetic Algorithm (GA)-Based Inclinometer Layout Optimization
Liang, Weijie; Zhang, Ping; Chen, Xianping; Cai, Miao; Yang, Daoguo
2015-01-01
This paper presents numerical simulation results of an airflow inclinometer with sensitivity studies and thermal optimization of the printed circuit board (PCB) layout for an airflow inclinometer based on a genetic algorithm (GA). Due to the working principle of the gas sensor, the changes of the ambient temperature may cause dramatic voltage drifts of sensors. Therefore, eliminating the influence of the external environment for the airflow is essential for the performance and reliability of an airflow inclinometer. In this paper, the mechanism of an airflow inclinometer and the influence of different ambient temperatures on the sensitivity of the inclinometer will be examined by the ANSYS-FLOTRAN CFD program. The results show that with changes of the ambient temperature on the sensing element, the sensitivity of the airflow inclinometer is inversely proportional to the ambient temperature and decreases when the ambient temperature increases. GA is used to optimize the PCB thermal layout of the inclinometer. The finite-element simulation method (ANSYS) is introduced to simulate and verify the results of our optimal thermal layout, and the results indicate that the optimal PCB layout greatly improves (by more than 50%) the sensitivity of the inclinometer. The study may be useful in the design of PCB layouts that are related to sensitivity improvement of gas sensors. PMID:25897500
Global structual optimizations of surface systems with a genetic algorithm
Chuang, Feng-Chuan
2005-05-01
Global structural optimizations with a genetic algorithm were performed for atomic cluster and surface systems including aluminum atomic clusters, Si magic clusters on the Si(111) 7 x 7 surface, silicon high-index surfaces, and Ag-induced Si(111) reconstructions. First, the global structural optimizations of neutral aluminum clusters Al{sub n} (n up to 23) were performed using a genetic algorithm coupled with a tight-binding potential. Second, a genetic algorithm in combination with tight-binding and first-principles calculations were performed to study the structures of magic clusters on the Si(111) 7 x 7 surface. Extensive calculations show that the magic cluster observed in scanning tunneling microscopy (STM) experiments consist of eight Si atoms. Simulated STM images of the Si magic cluster exhibit a ring-like feature similar to STM experiments. Third, a genetic algorithm coupled with a highly optimized empirical potential were used to determine the lowest energy structure of high-index semiconductor surfaces. The lowest energy structures of Si(105) and Si(114) were determined successfully. The results of Si(105) and Si(114) are reported within the framework of highly optimized empirical potential and first-principles calculations. Finally, a genetic algorithm coupled with Si and Ag tight-binding potentials were used to search for Ag-induced Si(111) reconstructions at various Ag and Si coverages. The optimized structural models of {radical}3 x {radical}3, 3 x 1, and 5 x 2 phases were reported using first-principles calculations. A novel model is found to have lower surface energy than the proposed double-honeycomb chained (DHC) model both for Au/Si(111) 5 x 2 and Ag/Si(111) 5 x 2 systems.
JavaGenes and Condor: Cycle-Scavenging Genetic Algorithms
NASA Technical Reports Server (NTRS)
Globus, Al; Langhirt, Eric; Livny, Miron; Ramamurthy, Ravishankar; Soloman, Marvin; Traugott, Steve
2000-01-01
A genetic algorithm code, JavaGenes, was written in Java and used to evolve pharmaceutical drug molecules and digital circuits. JavaGenes was run under the Condor cycle-scavenging batch system managing 100-170 desktop SGI workstations. Genetic algorithms mimic biological evolution by evolving solutions to problems using crossover and mutation. While most genetic algorithms evolve strings or trees, JavaGenes evolves graphs representing (currently) molecules and circuits. Java was chosen as the implementation language because the genetic algorithm requires random splitting and recombining of graphs, a complex data structure manipulation with ample opportunities for memory leaks, loose pointers, out-of-bound indices, and other hard to find bugs. Java garbage-collection memory management, lack of pointer arithmetic, and array-bounds index checking prevents these bugs from occurring, substantially reducing development time. While a run-time performance penalty must be paid, the only unacceptable performance we encountered was using standard Java serialization to checkpoint and restart the code. This was fixed by a two-day implementation of custom checkpointing. JavaGenes is minimally integrated with Condor; in other words, JavaGenes must do its own checkpointing and I/O redirection. A prototype Java-aware version of Condor was developed using standard Java serialization for checkpointing. For the prototype to be useful, standard Java serialization must be significantly optimized. JavaGenes is approximately 8700 lines of code and a few thousand JavaGenes jobs have been run. Most jobs ran for a few days. Results include proof that genetic algorithms can evolve directed and undirected graphs, development of a novel crossover operator for graphs, a paper in the journal Nanotechnology, and another paper in preparation.
An enhanced algorithm for multiple sequence alignment of protein sequences using genetic algorithm
Kumar, Manish
2015-01-01
One of the most fundamental operations in biological sequence analysis is multiple sequence alignment (MSA). The basic of multiple sequence alignment problems is to determine the most biologically plausible alignments of protein or DNA sequences. In this paper, an alignment method using genetic algorithm for multiple sequence alignment has been proposed. Two different genetic operators mainly crossover and mutation were defined and implemented with the proposed method in order to know the population evolution and quality of the sequence aligned. The proposed method is assessed with protein benchmark dataset, e.g., BALIBASE, by comparing the obtained results to those obtained with other alignment algorithms, e.g., SAGA, RBT-GA, PRRP, HMMT, SB-PIMA, CLUSTALX, CLUSTAL W, DIALIGN and PILEUP8 etc. Experiments on a wide range of data have shown that the proposed algorithm is much better (it terms of score) than previously proposed algorithms in its ability to achieve high alignment quality. PMID:27065770
An enhanced algorithm for multiple sequence alignment of protein sequences using genetic algorithm.
Kumar, Manish
2015-01-01
One of the most fundamental operations in biological sequence analysis is multiple sequence alignment (MSA). The basic of multiple sequence alignment problems is to determine the most biologically plausible alignments of protein or DNA sequences. In this paper, an alignment method using genetic algorithm for multiple sequence alignment has been proposed. Two different genetic operators mainly crossover and mutation were defined and implemented with the proposed method in order to know the population evolution and quality of the sequence aligned. The proposed method is assessed with protein benchmark dataset, e.g., BALIBASE, by comparing the obtained results to those obtained with other alignment algorithms, e.g., SAGA, RBT-GA, PRRP, HMMT, SB-PIMA, CLUSTALX, CLUSTAL W, DIALIGN and PILEUP8 etc. Experiments on a wide range of data have shown that the proposed algorithm is much better (it terms of score) than previously proposed algorithms in its ability to achieve high alignment quality. PMID:27065770
Evaluation of algorithms used to order markers on genetic maps.
Mollinari, M; Margarido, G R A; Vencovsky, R; Garcia, A A F
2009-12-01
When building genetic maps, it is necessary to choose from several marker ordering algorithms and criteria, and the choice is not always simple. In this study, we evaluate the efficiency of algorithms try (TRY), seriation (SER), rapid chain delineation (RCD), recombination counting and ordering (RECORD) and unidirectional growth (UG), as well as the criteria PARF (product of adjacent recombination fractions), SARF (sum of adjacent recombination fractions), SALOD (sum of adjacent LOD scores) and LHMC (likelihood through hidden Markov chains), used with the RIPPLE algorithm for error verification, in the construction of genetic linkage maps. A linkage map of a hypothetical diploid and monoecious plant species was simulated containing one linkage group and 21 markers with fixed distance of 3 cM between them. In all, 700 F(2) populations were randomly simulated with 100 and 400 individuals with different combinations of dominant and co-dominant markers, as well as 10 and 20% of missing data. The simulations showed that, in the presence of co-dominant markers only, any combination of algorithm and criteria may be used, even for a reduced population size. In the case of a smaller proportion of dominant markers, any of the algorithms and criteria (except SALOD) investigated may be used. In the presence of high proportions of dominant markers and smaller samples (around 100), the probability of repulsion linkage increases between them and, in this case, use of the algorithms TRY and SER associated to RIPPLE with criterion LHMC would provide better results. PMID:19639011
Efficient Improvement of Silage Additives by Using Genetic Algorithms
Davies, Zoe S.; Gilbert, Richard J.; Merry, Roger J.; Kell, Douglas B.; Theodorou, Michael K.; Griffith, Gareth W.
2000-01-01
The enormous variety of substances which may be added to forage in order to manipulate and improve the ensilage process presents an empirical, combinatorial optimization problem of great complexity. To investigate the utility of genetic algorithms for designing effective silage additive combinations, a series of small-scale proof of principle silage experiments were performed with fresh ryegrass. Having established that significant biochemical changes occur over an ensilage period as short as 2 days, we performed a series of experiments in which we used 50 silage additive combinations (prepared by using eight bacterial and other additives, each of which was added at six different levels, including zero [i.e., no additive]). The decrease in pH, the increase in lactate concentration, and the free amino acid concentration were measured after 2 days and used to calculate a “fitness” value that indicated the quality of the silage (compared to a control silage made without additives). This analysis also included a “cost” element to account for different total additive levels. In the initial experiment additive levels were selected randomly, but subsequently a genetic algorithm program was used to suggest new additive combinations based on the fitness values determined in the preceding experiments. The result was very efficient selection for silages in which large decreases in pH and high levels of lactate occurred along with low levels of free amino acids. During the series of five experiments, each of which comprised 50 treatments, there was a steady increase in the amount of lactate that accumulated; the best treatment combination was that used in the last experiment, which produced 4.6 times more lactate than the untreated silage. The additive combinations that were found to yield the highest fitness values in the final (fifth) experiment were assessed to determine a range of biochemical and microbiological quality parameters during full-term silage
A simple algorithm for optimization and model fitting: AGA (asexual genetic algorithm)
NASA Astrophysics Data System (ADS)
Cantó, J.; Curiel, S.; Martínez-Gómez, E.
2009-07-01
Context: Mathematical optimization can be used as a computational tool to obtain the optimal solution to a given problem in a systematic and efficient way. For example, in twice-differentiable functions and problems with no constraints, the optimization consists of finding the points where the gradient of the objective function is zero and using the Hessian matrix to classify the type of each point. Sometimes, however it is impossible to compute these derivatives and other type of techniques must be employed such as the steepest descent/ascent method and more sophisticated methods such as those based on the evolutionary algorithms. Aims: We present a simple algorithm based on the idea of genetic algorithms (GA) for optimization. We refer to this algorithm as AGA (asexual genetic algorithm) and apply it to two kinds of problems: the maximization of a function where classical methods fail and model fitting in astronomy. For the latter case, we minimize the chi-square function to estimate the parameters in two examples: the orbits of exoplanets by taking a set of radial velocity data, and the spectral energy distribution (SED) observed towards a YSO (Young Stellar Object). Methods: The algorithm AGA may also be called genetic, although it differs from standard genetic algorithms in two main aspects: a) the initial population is not encoded; and b) the new generations are constructed by asexual reproduction. Results: Applying our algorithm in optimizing some complicated functions, we find the global maxima within a few iterations. For model fitting to the orbits of exoplanets and the SED of a YSO, we estimate the parameters and their associated errors.
Automatic reactor model synthesis with genetic programming.
Dürrenmatt, David J; Gujer, Willi
2012-01-01
Successful modeling of wastewater treatment plant (WWTP) processes requires an accurate description of the plant hydraulics. Common methods such as tracer experiments are difficult and costly and thus have limited applicability in practice; engineers are often forced to rely on their experience only. An implementation of grammar-based genetic programming with an encoding to represent hydraulic reactor models as program trees should fill this gap: The encoding enables the algorithm to construct arbitrary reactor models compatible with common software used for WWTP modeling by linking building blocks, such as continuous stirred-tank reactors. Discharge measurements and influent and effluent concentrations are the only required inputs. As shown in a synthetic example, the technique can be used to identify a set of reactor models that perform equally well. Instead of being guided by experience, the most suitable model can now be chosen by the engineer from the set. In a second example, temperature measurements at the influent and effluent of a primary clarifier are used to generate a reactor model. A virtual tracer experiment performed on the reactor model has good agreement with a tracer experiment performed on-site. PMID:22277238
NASA Astrophysics Data System (ADS)
Karthik, Victor U.; Sivasuthan, Sivamayam; Hoole, Samuel Ratnajeevan H.
2014-02-01
The computational algorithms for device synthesis and nondestructive evaluation (NDE) are often the same. In both we have a goal - a particular field configuration yielding the design performance in synthesis or to match exterior measurements in NDE. The geometry of the design or the postulated interior defect is then computed. Several optimization methods are available for this. The most efficient like conjugate gradients are very complex to program for the required derivative information. The least efficient zeroth order algorithms like the genetic algorithm take much computational time but little programming effort. This paper reports launching a Genetic Algorithm kernel on thousands of compute unified device architecture (CUDA) threads exploiting the NVIDIA graphics processing unit (GPU) architecture. The efficiency of parallelization, although below that on shared memory supercomputer architectures, is quite effective in cutting down solution time into the realm of the practicable. We carry this further into multi-physics electro-heat problems where the parameters of description are in the electrical problem and the object function in the thermal problem. Indeed, this is where the derivative of the object function in the heat problem with respect to the parameters in the electrical problem is the most difficult to compute for gradient methods, and where the genetic algorithm is most easily implemented.
Packing Boxes into Multiple Containers Using Genetic Algorithm
NASA Astrophysics Data System (ADS)
Menghani, Deepak; Guha, Anirban
2016-07-01
Container loading problems have been studied extensively in the literature and various analytical, heuristic and metaheuristic methods have been proposed. This paper presents two different variants of a genetic algorithm framework for the three-dimensional container loading problem for optimally loading boxes into multiple containers with constraints. The algorithms are designed so that it is easy to incorporate various constraints found in real life problems. The algorithms are tested on data of standard test cases from literature and are found to compare well with the benchmark algorithms in terms of utilization of containers. This, along with the ability to easily incorporate a wide range of practical constraints, makes them attractive for implementation in real life scenarios.
Selection Intensity in Genetic Algorithms with Generation Gaps
Cantu-Paz, E.
2000-01-19
This paper presents calculations of the selection intensity of common selection and replacement methods used in genetic algorithms (GAs) with generation gaps. The selection intensity measures the increase of the average fitness of the population after selection, and it can be used to predict the average fitness of the population at each iteration as well as the number of steps until the population converges to a unique solution. In addition, the theory explains the fast convergence of some algorithms with small generation gaps. The accuracy of the calculations was verified experimentally with a simple test function. The results of this study facilitate comparisons between different algorithms, and provide a tool to adjust the selection pressure, which is indispensable to obtain robust algorithms.
The ordered clustered travelling salesman problem: a hybrid genetic algorithm.
Ahmed, Zakir Hussain
2014-01-01
The ordered clustered travelling salesman problem is a variation of the usual travelling salesman problem in which a set of vertices (except the starting vertex) of the network is divided into some prespecified clusters. The objective is to find the least cost Hamiltonian tour in which vertices of any cluster are visited contiguously and the clusters are visited in the prespecified order. The problem is NP-hard, and it arises in practical transportation and sequencing problems. This paper develops a hybrid genetic algorithm using sequential constructive crossover, 2-opt search, and a local search for obtaining heuristic solution to the problem. The efficiency of the algorithm has been examined against two existing algorithms for some asymmetric and symmetric TSPLIB instances of various sizes. The computational results show that the proposed algorithm is very effective in terms of solution quality and computational time. Finally, we present solution to some more symmetric TSPLIB instances. PMID:24701148
A novel pipeline based FPGA implementation of a genetic algorithm
NASA Astrophysics Data System (ADS)
Thirer, Nonel
2014-05-01
To solve problems when an analytical solution is not available, more and more bio-inspired computation techniques have been applied in the last years. Thus, an efficient algorithm is the Genetic Algorithm (GA), which imitates the biological evolution process, finding the solution by the mechanism of "natural selection", where the strong has higher chances to survive. A genetic algorithm is an iterative procedure which operates on a population of individuals called "chromosomes" or "possible solutions" (usually represented by a binary code). GA performs several processes with the population individuals to produce a new population, like in the biological evolution. To provide a high speed solution, pipelined based FPGA hardware implementations are used, with a nstages pipeline for a n-phases genetic algorithm. The FPGA pipeline implementations are constraints by the different execution time of each stage and by the FPGA chip resources. To minimize these difficulties, we propose a bio-inspired technique to modify the crossover step by using non identical twins. Thus two of the chosen chromosomes (parents) will build up two new chromosomes (children) not only one as in classical GA. We analyze the contribution of this method to reduce the execution time in the asynchronous and synchronous pipelines and also the possibility to a cheaper FPGA implementation, by using smaller populations. The full hardware architecture for a FPGA implementation to our target ALTERA development card is presented and analyzed.
Strain gage selection in loads equations using a genetic algorithm
NASA Technical Reports Server (NTRS)
1994-01-01
Traditionally, structural loads are measured using strain gages. A loads calibration test must be done before loads can be accurately measured. In one measurement method, a series of point loads is applied to the structure, and loads equations are derived via the least squares curve fitting algorithm using the strain gage responses to the applied point loads. However, many research structures are highly instrumented with strain gages, and the number and selection of gages used in a loads equation can be problematic. This paper presents an improved technique using a genetic algorithm to choose the strain gages used in the loads equations. Also presented are a comparison of the genetic algorithm performance with the current T-value technique and a variant known as the Best Step-down technique. Examples are shown using aerospace vehicle wings of high and low aspect ratio. In addition, a significant limitation in the current methods is revealed. The genetic algorithm arrived at a comparable or superior set of gages with significantly less human effort, and could be applied in instances when the current methods could not.
Distributed Query Plan Generation Using Multiobjective Genetic Algorithm
Panicker, Shina; Vijay Kumar, T. V.
2014-01-01
A distributed query processing strategy, which is a key performance determinant in accessing distributed databases, aims to minimize the total query processing cost. One way to achieve this is by generating efficient distributed query plans that involve fewer sites for processing a query. In the case of distributed relational databases, the number of possible query plans increases exponentially with respect to the number of relations accessed by the query and the number of sites where these relations reside. Consequently, computing optimal distributed query plans becomes a complex problem. This distributed query plan generation (DQPG) problem has already been addressed using single objective genetic algorithm, where the objective is to minimize the total query processing cost comprising the local processing cost (LPC) and the site-to-site communication cost (CC). In this paper, this DQPG problem is formulated and solved as a biobjective optimization problem with the two objectives being minimize total LPC and minimize total CC. These objectives are simultaneously optimized using a multiobjective genetic algorithm NSGA-II. Experimental comparison of the proposed NSGA-II based DQPG algorithm with the single objective genetic algorithm shows that the former performs comparatively better and converges quickly towards optimal solutions for an observed crossover and mutation probability. PMID:24963513
Using genetic algorithms to construct a network for financial prediction
NASA Astrophysics Data System (ADS)
Patel, Devesh
1996-03-01
Traditional forecasting models such as the Box-Jenkins ARIMA model are almost all based on models that assume a linear relationship amongst variables and cannot approximate the non- linear relationship that exists amongst variables in real-world data such as stock-price data. Artificial neural networks, on the other hand, consist of two or more levels of nonlinearity that have been successfully used to approximate the underlying relationships of time series data. Neural networks however, pose a design problem: their optimum topology and training rule parameters including learning rate and momentum, for the problem at hand need to be determined. In this paper, we use genetic algorithms to determine these design parameters. In general genetic algorithms are an optimization method that find solutions to a problem by an evolutionary process based on natural selection. The genetic algorithm searches through the network parameter space and the neural network learning algorithm evaluates the selected parameters. We then use the optimally configured network to predict the stock market price of a blue-chip company on the UK market.
Human-competitive evolution of quantum computing artefacts by Genetic Programming.
Massey, Paul; Clark, John A; Stepney, Susan
2006-01-01
We show how Genetic Programming (GP) can be used to evolve useful quantum computing artefacts of increasing sophistication and usefulness: firstly specific quantum circuits, then quantum programs, and finally system-independent quantum algorithms. We conclude the paper by presenting a human-competitive Quantum Fourier Transform (QFT) algorithm evolved by GP. PMID:16536889
Scope of Gradient and Genetic Algorithms in Multivariable Function Optimization
NASA Technical Reports Server (NTRS)
Shaykhian, Gholam Ali; Sen, S. K.
2007-01-01
Global optimization of a multivariable function - constrained by bounds specified on each variable and also unconstrained - is an important problem with several real world applications. Deterministic methods such as the gradient algorithms as well as the randomized methods such as the genetic algorithms may be employed to solve these problems. In fact, there are optimization problems where a genetic algorithm/an evolutionary approach is preferable at least from the quality (accuracy) of the results point of view. From cost (complexity) point of view, both gradient and genetic approaches are usually polynomial-time; there are no serious differences in this regard, i.e., the computational complexity point of view. However, for certain types of problems, such as those with unacceptably erroneous numerical partial derivatives and those with physically amplified analytical partial derivatives whose numerical evaluation involves undesirable errors and/or is messy, a genetic (stochastic) approach should be a better choice. We have presented here the pros and cons of both the approaches so that the concerned reader/user can decide which approach is most suited for the problem at hand. Also for the function which is known in a tabular form, instead of an analytical form, as is often the case in an experimental environment, we attempt to provide an insight into the approaches focusing our attention toward accuracy. Such an insight will help one to decide which method, out of several available methods, should be employed to obtain the best (least error) output. *
Optimization of solar air collector using genetic algorithm and artificial bee colony algorithm
NASA Astrophysics Data System (ADS)
Şencan Şahin, Arzu
2012-11-01
Thermal performance of solar air collector depends on many parameters as inlet air temperature, air velocity, collector slope and properties related to collector. In this study, the effect of the different parameters which affect the performance of the solar air collector are investigated. In order to maximize the thermal performance of a solar air collector genetic algorithm (GA) and artificial bee colony algorithm (ABC) have been used. The results obtained indicate that GA and ABC algorithms can be applied successfully for the optimization of the thermal performance of solar air collector.
NASA Astrophysics Data System (ADS)
Salami, M. J. E.; Tijani, I. B.; Abdullateef, A. I.; Aibinu, M. A.
2013-12-01
A hybrid optimization algorithm using Differential Evolution (DE) and Genetic Algorithm (GA) is proposed in this study to address the problem of network parameters determination associated with the Nonlinear Autoregressive with eXogenous inputs Network (NARX-network). The proposed algorithm involves a two level optimization scheme to search for both optimal network architecture and weights. The DE at the upper level is formulated as combinatorial optimization to search for the network architecture while the associated network weights that minimize the prediction error is provided by the GA at the lower level. The performance of the algorithm is evaluated on identification of a laboratory rotary motion system. The system identification results show the effectiveness of the proposed algorithm for nonparametric model development.
Duan, Qian-Qian; Yang, Gen-Ke; Pan, Chang-Chun
2014-01-01
A hybrid optimization algorithm combining finite state method (FSM) and genetic algorithm (GA) is proposed to solve the crude oil scheduling problem. The FSM and GA are combined to take the advantage of each method and compensate deficiencies of individual methods. In the proposed algorithm, the finite state method makes up for the weakness of GA which is poor at local searching ability. The heuristic returned by the FSM can guide the GA algorithm towards good solutions. The idea behind this is that we can generate promising substructure or partial solution by using FSM. Furthermore, the FSM can guarantee that the entire solution space is uniformly covered. Therefore, the combination of the two algorithms has better global performance than the existing GA or FSM which is operated individually. Finally, a real-life crude oil scheduling problem from the literature is used for conducting simulation. The experimental results validate that the proposed method outperforms the state-of-art GA method. PMID:24772031
Genetic algorithms and their use in Geophysical Problems
Parker, Paul B.
1999-04-01
Genetic algorithms (GAs), global optimization methods that mimic Darwinian evolution are well suited to the nonlinear inverse problems of geophysics. A standard genetic algorithm selects the best or ''fittest'' models from a ''population'' and then applies operators such as crossover and mutation in order to combine the most successful characteristics of each model and produce fitter models. More sophisticated operators have been developed, but the standard GA usually provides a robust and efficient search. Although the choice of parameter settings such as crossover and mutation rate may depend largely on the type of problem being solved, numerous results show that certain parameter settings produce optimal performance for a wide range of problems and difficulties. In particular, a low (about half of the inverse of the population size) mutation rate is crucial for optimal results, but the choice of crossover method and rate do not seem to affect performance appreciably. Optimal efficiency is usually achieved with smaller (< 50) populations. Lastly, tournament selection appears to be the best choice of selection methods due to its simplicity and its autoscaling properties. However, if a proportional selection method is used such as roulette wheel selection, fitness scaling is a necessity, and a high scaling factor (> 2.0) should be used for the best performance. Three case studies are presented in which genetic algorithms are used to invert for crustal parameters. The first is an inversion for basement depth at Yucca mountain using gravity data, the second an inversion for velocity structure in the crust of the south island of New Zealand using receiver functions derived from teleseismic events, and the third is a similar receiver function inversion for crustal velocities beneath the Mendocino Triple Junction region of Northern California. The inversions demonstrate that genetic algorithms are effective in solving problems with reasonably large numbers of free
A Dedicated Genetic Algorithm for Localization of Moving Magnetic Objects
Alimi, Roger; Weiss, Eyal; Ram-Cohen, Tsuriel; Geron, Nir; Yogev, Idan
2015-01-01
A dedicated Genetic Algorithm (GA) has been developed to localize the trajectory of ferromagnetic moving objects within a bounded perimeter. Localization of moving ferromagnetic objects is an important tool because it can be employed in situations when the object is obscured. This work is innovative for two main reasons: first, the GA has been tuned to provide an accurate and fast solution to the inverse magnetic field equations problem. Second, the algorithm has been successfully tested using real-life experimental data. Very accurate trajectory localization estimations were obtained over a wide range of scenarios. PMID:26393598
Detection of parametric curves based on genetic algorithm
NASA Astrophysics Data System (ADS)
Li, Haimin; Wu, Chengke
1998-09-01
Detection of curves with special shapes has been put on great interest in the fields of image processing and recognition. Some commonly used algorithms such as Hough Transform and Generalized Radon Transform are global search methods. When the number of parameters increases, their efficiencies decrease rapidly because of the expansion of parameter space. To solve this problem, a new method based on Genetic Algorithm is presented which combines a local search procedure to improve its performance. Experimental results show that the proposed method improves search efficiency greatly.
Mass spectrometry cancer data classification using wavelets and genetic algorithm.
Nguyen, Thanh; Nahavandi, Saeid; Creighton, Douglas; Khosravi, Abbas
2015-12-21
This paper introduces a hybrid feature extraction method applied to mass spectrometry (MS) data for cancer classification. Haar wavelets are employed to transform MS data into orthogonal wavelet coefficients. The most prominent discriminant wavelets are then selected by genetic algorithm (GA) to form feature sets. The combination of wavelets and GA yields highly distinct feature sets that serve as inputs to classification algorithms. Experimental results show the robustness and significant dominance of the wavelet-GA against competitive methods. The proposed method therefore can be applied to cancer classification models that are useful as real clinical decision support systems for medical practitioners. PMID:26611346
a Genetic Algorithm for Urban Transit Routing Problem
NASA Astrophysics Data System (ADS)
Chew, Joanne Suk Chun; Lee, Lai Soon
The Urban Transit Routing Problem (UTRP) involves solving a set of transit route networks, which proved to be a highly complex multi-constrained problem. In this study, a bus route network to find an efficient network to meet customer demands given information on link travel times is considered. An evolutionary optimization technique, called Genetic Algorithm is proposed to solve the UTRP. The main objective is to minimize the passenger costs where the quality of the route sets is evaluated by a set of parameters. Initial computational experiments show that the proposed algorithm performs better than the benchmark results for Mandl's problems.
Optimization of multilayer cylindrical cloaks using genetic algorithms and NEWUOA
NASA Astrophysics Data System (ADS)
Sakr, Ahmed A.; Abdelmageed, Alaa K.
2016-06-01
The problem of minimizing the scattering from a multilayer cylindrical cloak is studied. Both TM and TE polarizations are considered. A two-stage optimization procedure using genetic algorithms and NEWUOA (new unconstrained optimization algorithm) is adopted for realizing the cloak using homogeneous isotropic layers. The layers are arranged such that they follow a repeated pattern of alternating DPS and DNG materials. The results show that a good level of invisibility can be realized using a reasonable number of layers. Maintaining the cloak performance over a finite range of frequencies without sacrificing the level of invisibility is achieved.
Genetic Algorithm for Initial Orbit Determination with Too Short Arc
NASA Astrophysics Data System (ADS)
Li, X. R.; Wang, X.
2016-01-01
The sky surveys of space objects have obtained a huge quantity of too-short-arc (TSA) observation data. However, the classical method of initial orbit determination (IOD) can hardly get reasonable results for the TSAs. The IOD is reduced to a two-stage hierarchical optimization problem containing three variables for each stage. Using the genetic algorithm, a new method of the IOD for TSAs is established, through the selection of optimizing variables as well as the corresponding genetic operator for specific problems. Numerical experiments based on the real measurements show that the method can provide valid initial values for the follow-up work.
NASA Astrophysics Data System (ADS)
Windarto, Indratno, S. W.; Nuraini, N.; Soewono, E.
2014-02-01
Genetic algorithm is an optimization method based on the principles of genetics and natural selection in life organisms. The algorithm begins by defining the optimization variables, defining the cost function (in a minimization problem) or the fitness function (in a maximization problem) and selecting genetic algorithm parameters. The main procedures in genetic algorithm are generating initial population, selecting some chromosomes (individual) as parent's individual, mating, and mutation. In this paper, binary and continuous genetic algorithms were implemented to estimate growth rate and carrying capacity parameter from poultry data cited from literature. For simplicity, all genetic algorithm parameters (selection rate and mutation rate) are set to be constant along implementation of the algorithm. It was found that by selecting suitable mutation rate, both algorithms can estimate these parameters well. Suitable range for mutation rate in continuous genetic algorithm is wider than the binary one.
Inverting the parameters of an earthquake-ruptured fault with a genetic algorithm
NASA Astrophysics Data System (ADS)
Yu, Ting-To; Fernàndez, Josè; Rundle, John B.
1998-03-01
Natural selection is the spirit of the genetic algorithm (GA): by keeping the good genes in the current generation, thereby producing better offspring during evolution. The crossover function ensures the heritage of good genes from parent to offspring. Meanwhile, the process of mutation creates a special gene, the character of which does not exist in the parent generation. A program based on genetic algorithms using C language is constructed to invert the parameters of an earthquake-ruptured fault. The verification and application of this code is shown to demonstrate its capabilities. It is determined that this code is able to find the global extreme and can be used to solve more practical problems with constraints gathered from other sources. It is shown that GA is superior to other inverting schema in many aspects. This easy handling and yet powerful algorithm should have many suitable applications in the field of geosciences.
Optimal Design of Geodetic Network Using Genetic Algorithms
NASA Astrophysics Data System (ADS)
Vajedian, Sanaz; Bagheri, Hosein
2010-05-01
A geodetic network is a network which is measured exactly by techniques of terrestrial surveying based on measurement of angles and distances and can control stability of dams, towers and their around lands and can monitor deformation of surfaces. The main goals of an optimal geodetic network design process include finding proper location of control station (First order Design) as well as proper weight of observations (second order observation) in a way that satisfy all the criteria considered for quality of the network with itself is evaluated by the network's accuracy, reliability (internal and external), sensitivity and cost. The first-order design problem, can be dealt with as a numeric optimization problem. In this designing finding unknown coordinates of network stations is an important issue. For finding these unknown values, network geodetic observations that are angle and distance measurements must be entered in an adjustment method. In this regard, using inverse problem algorithms is needed. Inverse problem algorithms are methods to find optimal solutions for given problems and include classical and evolutionary computations. The classical approaches are analytical methods and are useful in finding the optimum solution of a continuous and differentiable function. Least squares (LS) method is one of the classical techniques that derive estimates for stochastic variables and their distribution parameters from observed samples. The evolutionary algorithms are adaptive procedures of optimization and search that find solutions to problems inspired by the mechanisms of natural evolution. These methods generate new points in the search space by applying operators to current points and statistically moving toward more optimal places in the search space. Genetic algorithm (GA) is an evolutionary algorithm considered in this paper. This algorithm starts with definition of initial population, and then the operators of selection, replication and variation are applied
Atmospheric Downscaling using Genetic Programming
NASA Astrophysics Data System (ADS)
Zerenner, T.; Venema, V.; Simmer, C.
2013-12-01
The coupling of models for the different components of the soil-vegetation-atmosphere system is required to understand component interactions and feedback processes. The Transregional Collaborative Research Center 32 (TR 32) has developed a coupled modeling platform, TerrSysMP, consisting of the atmospheric model COSMO, the land-surface model CLM, and the hydrological model ParFlow. These component models are usually operated at different resolutions in space and time owing to the dominant processes. These different scales should also be considered in the coupling mode, because it is for instance unfeasible to run the computationally quite expensive atmospheric models at the usually much higher spatial resolution required by hydrological models. Thus up- and downscaling procedures are required at the interface between atmospheric model and land-surface/subsurface models. Here we present an advanced atmospheric downscaling scheme, that creates realistic fine-scale fields (e.g. 400 m resolution) of the atmospheric state variables from the coarse atmospheric model output (e.g. 2.8 km resolution). The mixed physical/statistical scheme is developed from a training data set of high-resolution atmospheric model runs covering a range different weather conditions using Genetic Programming (GP). GP originates from machine learning: From a set of functions (arithmetic expressions, IF-statements, etc.) and terminals (constants or variables) GP generates potential solutions to a given problem while minimizing a fitness or cost function. We use a multi-objective approach that aims at fitting spatial structures, spatially distributed variance and spatio-temporal correlation of the fields. We account for the spatio-temporal nature of the data in two ways. On the one hand we offer GP potential predictors, which are based on our physical understanding of the atmospheric processes involved (spatial and temporal gradients, etc.). On the other hand we include functions operating on
A pipelined FPGA implementation of an encryption algorithm based on genetic algorithm
NASA Astrophysics Data System (ADS)
Thirer, Nonel
2013-05-01
With the evolution of digital data storage and exchange, it is essential to protect the confidential information from every unauthorized access. High performance encryption algorithms were developed and implemented by software and hardware. Also many methods to attack the cipher text were developed. In the last years, the genetic algorithm has gained much interest in cryptanalysis of cipher texts and also in encryption ciphers. This paper analyses the possibility to use the genetic algorithm as a multiple key sequence generator for an AES (Advanced Encryption Standard) cryptographic system, and also to use a three stages pipeline (with four main blocks: Input data, AES Core, Key generator, Output data) to provide a fast encryption and storage/transmission of a large amount of data.
Genetic algorithm application in optimization of wireless sensor networks.
Norouzi, Ali; Zaim, A Halim
2014-01-01
There are several applications known for wireless sensor networks (WSN), and such variety demands improvement of the currently available protocols and the specific parameters. Some notable parameters are lifetime of network and energy consumption for routing which play key role in every application. Genetic algorithm is one of the nonlinear optimization methods and relatively better option thanks to its efficiency for large scale applications and that the final formula can be modified by operators. The present survey tries to exert a comprehensive improvement in all operational stages of a WSN including node placement, network coverage, clustering, and data aggregation and achieve an ideal set of parameters of routing and application based WSN. Using genetic algorithm and based on the results of simulations in NS, a specific fitness function was achieved, optimized, and customized for all the operational stages of WSNs. PMID:24693235
Adaptive process control using fuzzy logic and genetic algorithms
NASA Technical Reports Server (NTRS)
Karr, C. L.
1993-01-01
Researchers at the U.S. Bureau of Mines have developed adaptive process control systems in which genetic algorithms (GA's) are used to augment fuzzy logic controllers (FLC's). GA's are search algorithms that rapidly locate near-optimum solutions to a wide spectrum of problems by modeling the search procedures of natural genetics. FLC's are rule based systems that efficiently manipulate a problem environment by modeling the 'rule-of-thumb' strategy used in human decision making. Together, GA's and FLC's possess the capabilities necessary to produce powerful, efficient, and robust adaptive control systems. To perform efficiently, such control systems require a control element to manipulate the problem environment, and a learning element to adjust to the changes in the problem environment. Details of an overall adaptive control system are discussed. A specific laboratory acid-base pH system is used to demonstrate the ideas presented.
Adaptive Process Control with Fuzzy Logic and Genetic Algorithms
NASA Technical Reports Server (NTRS)
Karr, C. L.
1993-01-01
Researchers at the U.S. Bureau of Mines have developed adaptive process control systems in which genetic algorithms (GA's) are used to augment fuzzy logic controllers (FLC's). GA's are search algorithms that rapidly locate near-optimum solutions to a wide spectrum of problems by modeling the search procedures of natural genetics. FLC's are rule based systems that efficiently manipulate a problem environment by modeling the 'rule-of-thumb' strategy used in human decision-making. Together, GA's and FLC's possess the capabilities necessary to produce powerful, efficient, and robust adaptive control systems. To perform efficiently, such control systems require a control element to manipulate the problem environment, an analysis element to recognize changes in the problem environment, and a learning element to adjust to the changes in the problem environment. Details of an overall adaptive control system are discussed. A specific laboratory acid-base pH system is used to demonstrate the ideas presented.
A sustainable genetic algorithm for satellite resource allocation
NASA Technical Reports Server (NTRS)
Abbott, R. J.; Campbell, M. L.; Krenz, W. C.
1995-01-01
A hybrid genetic algorithm is used to schedule tasks for 8 satellites, which can be modelled as a robot whose task is to retrieve objects from a two dimensional field. The objective is to find a schedule that maximizes the value of objects retrieved. Typical of the real-world tasks to which this corresponds is the scheduling of ground contacts for a communications satellite. An important feature of our application is that the amount of time available for running the scheduler is not necessarily known in advance. This requires that the scheduler produce reasonably good results after a short period but that it also continue to improve its results if allowed to run for a longer period. We satisfy this requirement by developing what we call a sustainable genetic algorithm.
Designing a competent simple genetic algorithm for search and optimization
NASA Astrophysics Data System (ADS)
Reed, Patrick; Minsker, Barbara; Goldberg, David E.
2000-12-01
Simple genetic algorithms have been used to solve many water resources problems, but specifying the parameters that control how adaptive search is performed can be a difficult and time-consuming trial-and-error process. However, theoretical relationships for population sizing and timescale analysis have been developed that can provide pragmatic tools for vastly limiting the number of parameter combinations that must be considered. The purpose of this technical note is to summarize these relationships for the water resources community and to illustrate their practical utility in a long-term groundwater monitoring design application. These relationships, which model the effects of the primary operators of a simple genetic algorithm (selection, recombination, and mutation), provide a highly efficient method for ensuring convergence to near-optimal or optimal solutions. Application of the method to a monitoring design test case identified robust parameter values using only three trial runs.
Genetic Algorithm Application in Optimization of Wireless Sensor Networks
Norouzi, Ali; Zaim, A. Halim
2014-01-01
There are several applications known for wireless sensor networks (WSN), and such variety demands improvement of the currently available protocols and the specific parameters. Some notable parameters are lifetime of network and energy consumption for routing which play key role in every application. Genetic algorithm is one of the nonlinear optimization methods and relatively better option thanks to its efficiency for large scale applications and that the final formula can be modified by operators. The present survey tries to exert a comprehensive improvement in all operational stages of a WSN including node placement, network coverage, clustering, and data aggregation and achieve an ideal set of parameters of routing and application based WSN. Using genetic algorithm and based on the results of simulations in NS, a specific fitness function was achieved, optimized, and customized for all the operational stages of WSNs. PMID:24693235
Design of PID-type controllers using multiobjective genetic algorithms.
Herreros, Alberto; Baeyens, Enrique; Perán, José R
2002-10-01
The design of a PID controller is a multiobjective problem. A plant and a set of specifications to be satisfied are given. The designer has to adjust the parameters of the PID controller such that the feedback interconnection of the plant and the controller satisfies the specifications. These specifications are usually competitive and any acceptable solution requires a tradeoff among them. An approach for adjusting the parameters of a PID controller based on multiobjective optimization and genetic algorithms is presented in this paper. The MRCD (multiobjective robust control design) genetic algorithm has been employed. The approach can be easily generalized to design multivariable coupled and decentralized PID loops and has been successfully validated for a large number of experimental cases. PMID:12398277
Optimum Actuator Selection with a Genetic Algorithm for Aircraft Control
NASA Technical Reports Server (NTRS)
Rogers, James L.
2004-01-01
The placement of actuators on a wing determines the control effectiveness of the airplane. One approach to placement maximizes the moments about the pitch, roll, and yaw axes, while minimizing the coupling. For example, the desired actuators produce a pure roll moment without at the same time causing much pitch or yaw. For a typical wing, there is a large set of candidate locations for placing actuators, resulting in a substantially larger number of combinations to examine in order to find an optimum placement satisfying the mission requirements and mission constraints. A genetic algorithm has been developed for finding the best placement for four actuators to produce an uncoupled pitch moment. The genetic algorithm has been extended to find the minimum number of actuators required to provide uncoupled pitch, roll, and yaw control. A simplified, untapered, unswept wing is the model for each application.
GAz: a genetic algorithm for photometric redshift estimation
NASA Astrophysics Data System (ADS)
Hogan, Robert; Fairbairn, Malcolm; Seeburn, Navin
2015-05-01
We present a new approach to the problem of estimating the redshift of galaxies from photometric data. The approach uses a genetic algorithm combined with non-linear regression to model the 2SLAQ LRG data set with SDSS DR7 photometry. The genetic algorithm explores the very large space of high order polynomials while only requiring optimization of a small number of terms. We find a σrms = 0.0408 ± 0.0006 for redshifts in the range 0.4 < z < 0.7. These results are competitive with the current state-of-the-art but can be presented simply as a polynomial which does not require the user to run any code. We demonstrate that the method generalizes well to other data sets and redshift ranges by testing it on SDSS DR11 and on simulated data. For other data sets or applications the code has been made available at https://github.com/rbrthogan/GAz.
Calibration of FRESIM for Singapore expressway using genetic algorithm
Cheu, R.L.; Jin, X.; Srinivasa, D.; Ng, K.C.; Ng, Y.L.
1998-11-01
FRESIM is a microscopic time-stepping simulation model for freeway corridor traffic operations. To enable FRESIM to realistically simulate expressway traffic flow in Singapore, parameters that govern the movement of vehicles needed to be recalibrated for local traffic conditions. This paper presents the application of a genetic algorithm as an optimization method for finding a suitable combination of FRESIM parameter values. The calibration is based on field data collected on weekdays over a 5.8 km segment of the Ayer Rajar Expressway. Independent calibrations have been made for evening peak and midday off-peak traffic. The results show that the genetic algorithm is able to search for two sets of parameter values that enable FRESIM to produce 30-s loop-detector volume and speed (averaged across all lanes) closely matching the field data under two different traffic conditions. The two sets of parameter values are found to produce a consistently good match for data collected in different days.
Bellucci, Michael A; Coker, David F
2011-07-28
We describe a new method for constructing empirical valence bond potential energy surfaces using a parallel multilevel genetic program (PMLGP). Genetic programs can be used to perform an efficient search through function space and parameter space to find the best functions and sets of parameters that fit energies obtained by ab initio electronic structure calculations. Building on the traditional genetic program approach, the PMLGP utilizes a hierarchy of genetic programming on two different levels. The lower level genetic programs are used to optimize coevolving populations in parallel while the higher level genetic program (HLGP) is used to optimize the genetic operator probabilities of the lower level genetic programs. The HLGP allows the algorithm to dynamically learn the mutation or combination of mutations that most effectively increase the fitness of the populations, causing a significant increase in the algorithm's accuracy and efficiency. The algorithm's accuracy and efficiency is tested against a standard parallel genetic program with a variety of one-dimensional test cases. Subsequently, the PMLGP is utilized to obtain an accurate empirical valence bond model for proton transfer in 3-hydroxy-gamma-pyrone in gas phase and protic solvent. PMID:21806098
Adaptable Constrained Genetic Programming: Extensions and Applications
NASA Technical Reports Server (NTRS)
Janikow, Cezary Z.
2005-01-01
An evolutionary algorithm applies evolution-based principles to problem solving. To solve a problem, the user defines the space of potential solutions, the representation space. Sample solutions are encoded in a chromosome-like structure. The algorithm maintains a population of such samples, which undergo simulated evolution by means of mutation, crossover, and survival of the fittest principles. Genetic Programming (GP) uses tree-like chromosomes, providing very rich representation suitable for many problems of interest. GP has been successfully applied to a number of practical problems such as learning Boolean functions and designing hardware circuits. To apply GP to a problem, the user needs to define the actual representation space, by defining the atomic functions and terminals labeling the actual trees. The sufficiency principle requires that the label set be sufficient to build the desired solution trees. The closure principle allows the labels to mix in any arity-consistent manner. To satisfy both principles, the user is often forced to provide a large label set, with ad hoc interpretations or penalties to deal with undesired local contexts. This unfortunately enlarges the actual representation space, and thus usually slows down the search. In the past few years, three different methodologies have been proposed to allow the user to alleviate the closure principle by providing means to define, and to process, constraints on mixing the labels in the trees. Last summer we proposed a new methodology to further alleviate the problem by discovering local heuristics for building quality solution trees. A pilot system was implemented last summer and tested throughout the year. This summer we have implemented a new revision, and produced a User's Manual so that the pilot system can be made available to other practitioners and researchers. We have also designed, and partly implemented, a larger system capable of dealing with much more powerful heuristics.
Optical design with the aid of a genetic algorithm.
van Leijenhorst, D C; Lucasius, C B; Thijssen, J M
1996-01-01
Natural evolution is widely accepted as being the process underlying the design and optimization of the sensory functions of biological organisms. Using a genetic algorithm, this process is extended to the automatic optimization and design of optical systems, e.g. as used in astronomical telescopes. The results of this feasibility study indicate that various types of aberrations can be corrected quickly and simultaneously, even on small computers. PMID:8924643
Investigation of range extension with a genetic algorithm
Austin, A. S., LLNL
1998-03-04
Range optimization is one of the tasks associated with the development of cost- effective, stand-off, air-to-surface munitions systems. The search for the optimal input parameters that will result in the maximum achievable range often employ conventional Monte Carlo techniques. Monte Carlo approaches can be time-consuming, costly, and insensitive to mutually dependent parameters and epistatic parameter effects. An alternative search and optimization technique is available in genetic algorithms. In the experiments discussed in this report, a simplified platform motion simulator was the fitness function for a genetic algorithm. The parameters to be optimized were the inputs to this motion generator and the simulator`s output (terminal range) was the fitness measure. The parameters of interest were initial launch altitude, initial launch speed, wing angle-of-attack, and engine ignition time. The parameter values the GA produced were validated by Monte Carlo investigations employing a full-scale six-degree-of-freedom (6 DOF) simulation. The best results produced by Monte Carlo processes using values based on the GA derived parameters were within - 1% of the ranges generated by the simplified model using the evolved parameter values. This report has five sections. Section 2 discusses the motivation for the range extension investigation and reviews the surrogate flight model developed as a fitness function for the genetic algorithm tool. Section 3 details the representation and implementation of the task within the genetic algorithm framework. Section 4 discusses the results. Section 5 concludes the report with a summary and suggestions for further research.
Optimal design of plasmonic waveguide using multiobjective genetic algorithm
NASA Astrophysics Data System (ADS)
Jung, Jaehoon
2016-01-01
An approach for multiobjective optimal design of a plasmonic waveguide is presented. We use a multiobjective extension of a genetic algorithm to find the Pareto-optimal geometries. The design variables are the geometrical parameters of the waveguide. The objective functions are chosen as the figure of merit defined as the ratio between the propagation distance and effective mode size and the normalized coupling length between adjacent waveguides at the telecom wavelength of 1550 nm.
A genetic algorithm for ground-based telescope observation scheduling
NASA Astrophysics Data System (ADS)
Mahoney, William; Veillet, Christian; Thanjavur, Karun
2012-09-01
A prototype genetic algorithm (GA) is being developed to provide assisted and ultimately automated observation scheduling functionality. Harnessing the logic developed for manual queue preparation, the GA can build suitable sets of queues for the potential combinations of environmental and atmospheric conditions. Evolving one step further, the GA can select the most suitable observation for any moment in time, based on allocated priorities, agency balances, and realtime availability of the skies' condition.
OPTIMIZATION OF LONG RURAL FEEDERS USING A GENETIC ALGORITHM
Wishart, Michael; Ledwich, Gerard; Ghosh, Arindam; Ivanovich, Grujica
2010-06-15
This paper describes the optimization of conductor size and the voltage regulator location and magnitude of long rural distribution lines. The optimization minimizes the lifetime cost of the lines, including capital costs and losses while observing voltage drop and operational constraints using a Genetic Algorithm (GA). The GA optimization is applied to a real Single Wire Earth Return (SWER) network in regional Queensland and results are presented.
A Study of Penalty Function Methods for Constraint Handling with Genetic Algorithm
NASA Technical Reports Server (NTRS)
Ortiz, Francisco
2004-01-01
COMETBOARDS (Comparative Evaluation Testbed of Optimization and Analysis Routines for Design of Structures) is a design optimization test bed that can evaluate the performance of several different optimization algorithms. A few of these optimization algorithms are the sequence of unconstrained minimization techniques (SUMT), sequential linear programming (SLP) and the sequential quadratic programming techniques (SQP). A genetic algorithm (GA) is a search technique that is based on the principles of natural selection or "survival of the fittest". Instead of using gradient information, the GA uses the objective function directly in the search. The GA searches the solution space by maintaining a population of potential solutions. Then, using evolving operations such as recombination, mutation and selection, the GA creates successive generations of solutions that will evolve and take on the positive characteristics of their parents and thus gradually approach optimal or near-optimal solutions. By using the objective function directly in the search, genetic algorithms can be effectively applied in non-convex, highly nonlinear, complex problems. The genetic algorithm is not guaranteed to find the global optimum, but it is less likely to get trapped at a local optimum than traditional gradient-based search methods when the objective function is not smooth and generally well behaved. The purpose of this research is to assist in the integration of genetic algorithm (GA) into COMETBOARDS. COMETBOARDS cast the design of structures as a constrained nonlinear optimization problem. One method used to solve constrained optimization problem with a GA to convert the constrained optimization problem into an unconstrained optimization problem by developing a penalty function that penalizes infeasible solutions. There have been several suggested penalty function in the literature each with there own strengths and weaknesses. A statistical analysis of some suggested penalty functions
Neural-network-biased genetic algorithms for materials design
NASA Astrophysics Data System (ADS)
Patra, Tarak; Meenakshisundaram, Venkatesh; Simmons, David
Machine learning tools have been progressively adopted by the materials science community to accelerate design of materials with targeted properties. However, in the search for new materials exhibiting properties and performance beyond that previously achieved, machine learning approaches are frequently limited by two major shortcomings. First, they are intrinsically interpolative. They are therefore better suited to the optimization of properties within the known range of accessible behavior than to the discovery of new materials with extremal behavior. Second, they require the availability of large datasets, which in some fields are not available and would be prohibitively expensive to produce. Here we describe a new strategy for combining genetic algorithms, neural networks and other machine learning tools, and molecular simulation to discover materials with extremal properties in the absence of pre-existing data. Predictions from progressively constructed machine learning tools are employed to bias the evolution of a genetic algorithm, with fitness evaluations performed via direct molecular dynamics simulation. We survey several initial materials design problems we have addressed with this framework and compare its performance to that of standard genetic algorithm approaches. We acknowledge the W. M. Keck Foundation for support of this work.
Genetic Algorithm Optimizes Q-LAW Control Parameters
NASA Technical Reports Server (NTRS)
Lee, Seungwon; von Allmen, Paul; Petropoulos, Anastassios; Terrile, Richard
2008-01-01
A document discusses a multi-objective, genetic algorithm designed to optimize Lyapunov feedback control law (Q-law) parameters in order to efficiently find Pareto-optimal solutions for low-thrust trajectories for electronic propulsion systems. These would be propellant-optimal solutions for a given flight time, or flight time optimal solutions for a given propellant requirement. The approximate solutions are used as good initial solutions for high-fidelity optimization tools. When the good initial solutions are used, the high-fidelity optimization tools quickly converge to a locally optimal solution near the initial solution. Q-law control parameters are represented as real-valued genes in the genetic algorithm. The performances of the Q-law control parameters are evaluated in the multi-objective space (flight time vs. propellant mass) and sorted by the non-dominated sorting method that assigns a better fitness value to the solutions that are dominated by a fewer number of other solutions. With the ranking result, the genetic algorithm encourages the solutions with higher fitness values to participate in the reproduction process, improving the solutions in the evolution process. The population of solutions converges to the Pareto front that is permitted within the Q-law control parameter space.
MAC protocol for ad hoc networks using a genetic algorithm.
Elizarraras, Omar; Panduro, Marco; Méndez, Aldo L; Reyna, Alberto
2014-01-01
The problem of obtaining the transmission rate in an ad hoc network consists in adjusting the power of each node to ensure the signal to interference ratio (SIR) and the energy required to transmit from one node to another is obtained at the same time. Therefore, an optimal transmission rate for each node in a medium access control (MAC) protocol based on CSMA-CDMA (carrier sense multiple access-code division multiple access) for ad hoc networks can be obtained using evolutionary optimization. This work proposes a genetic algorithm for the transmission rate election considering a perfect power control, and our proposition achieves improvement of 10% compared with the scheme that handles the handshaking phase to adjust the transmission rate. Furthermore, this paper proposes a genetic algorithm that solves the problem of power combining, interference, data rate, and energy ensuring the signal to interference ratio in an ad hoc network. The result of the proposed genetic algorithm has a better performance (15%) compared to the CSMA-CDMA protocol without optimizing. Therefore, we show by simulation the effectiveness of the proposed protocol in terms of the throughput. PMID:25140339
MAC Protocol for Ad Hoc Networks Using a Genetic Algorithm
Elizarraras, Omar; Panduro, Marco; Méndez, Aldo L.
2014-01-01
The problem of obtaining the transmission rate in an ad hoc network consists in adjusting the power of each node to ensure the signal to interference ratio (SIR) and the energy required to transmit from one node to another is obtained at the same time. Therefore, an optimal transmission rate for each node in a medium access control (MAC) protocol based on CSMA-CDMA (carrier sense multiple access-code division multiple access) for ad hoc networks can be obtained using evolutionary optimization. This work proposes a genetic algorithm for the transmission rate election considering a perfect power control, and our proposition achieves improvement of 10% compared with the scheme that handles the handshaking phase to adjust the transmission rate. Furthermore, this paper proposes a genetic algorithm that solves the problem of power combining, interference, data rate, and energy ensuring the signal to interference ratio in an ad hoc network. The result of the proposed genetic algorithm has a better performance (15%) compared to the CSMA-CDMA protocol without optimizing. Therefore, we show by simulation the effectiveness of the proposed protocol in terms of the throughput. PMID:25140339
Edge detection in medical images using a genetic algorithm.
Gudmundsson, M; El-Kwae, E A; Kabuka, M R
1998-06-01
An algorithm is developed that detects well-localized, unfragmented, thin edges in medical images based on optimization of edge configurations using a genetic algorithm (GA). Several enhancements were added to improve the performance of the algorithm over a traditional GA. The edge map is split into connected subregions to reduce the solution space and simplify the problem. The edge-map is then optimized in parallel using incorporated genetic operators that perform transforms on edge structures. Adaptation is used to control operator probabilities based on their participation. The GA was compared to the simulated annealing (SA) approach using ideal and actual medical images from different modalities including magnetic resonance imaging (MRI), computed tomography (CT), and ultrasound. Quantitative comparisons were provided based on the Pratt figure of merit and on the cost-function minimization. The detected edges were thin, continuous, and well localized. Most of the basic edge features were detected. Results for different medical image modalities are promising and encourage further investigation to improve the accuracy and experiment with different cost functions and genetic operators. PMID:9735910
Genetic algorithm testbed for expert system testing. Final report
Roache, E.
1996-01-01
In recent years, the electric utility industry has developed advisory and control software that makes use of expert system technology. The validation of the underlying knowledge representation in these expert systems is critical to their success. Most expert systems currently deployed have been validated by certifying that the expert system provides appropriate conclusions for specific test cases. While this type of testing is important, it does not test cases where unexpected inputs are presented to the expert system and potential errors are exposed. Exhaustive testing is not typically an option due to the complexity of the knowledge representation and the combinatorial effects associated with checking all possible inputs through all possible execution paths. Genetic algorithms are general purpose search techniques modeled on natural adaptive systems and selective breeding methods. Genetic algorithms have been used successfully for parameter optimization and efficient search. The goal of this project was to confirm or reject the hypothesis that genetic algorithms (GAs) are useful in expert system validation. The GA system specifically targeted errors in the study`s expert system that would be exposed by unexpected input cases. The GA system found errors in the expert system and the hypothesis was confirmed. This report describes the process and results of the project.
Modeling the Volcanic Source at Long Valley, CA, Using a Genetic Algorithm Technique
NASA Technical Reports Server (NTRS)
Tiampo, Kristy F.
1999-01-01
In this project, we attempted to model the deformation pattern due to the magmatic source at Long Valley caldera using a real-value coded genetic algorithm (GA) inversion similar to that found in Michalewicz, 1992. The project has been both successful and rewarding. The genetic algorithm, coded in the C programming language, performs stable inversions over repeated trials, with varying initial and boundary conditions. The original model used a GA in which the geophysical information was coded into the fitness function through the computation of surface displacements for a Mogi point source in an elastic half-space. The program was designed to invert for a spherical magmatic source - its depth, horizontal location and volume - using the known surface deformations. It also included the capability of inverting for multiple sources.
An Airborne Conflict Resolution Approach Using a Genetic Algorithm
NASA Technical Reports Server (NTRS)
Mondoloni, Stephane; Conway, Sheila
2001-01-01
An airborne conflict resolution approach is presented that is capable of providing flight plans forecast to be conflict-free with both area and traffic hazards. This approach is capable of meeting constraints on the flight plan such as required times of arrival (RTA) at a fix. The conflict resolution algorithm is based upon a genetic algorithm, and can thus seek conflict-free flight plans meeting broader flight planning objectives such as minimum time, fuel or total cost. The method has been applied to conflicts occurring 6 to 25 minutes in the future in climb, cruise and descent phases of flight. The conflict resolution approach separates the detection, trajectory generation and flight rules function from the resolution algorithm. The method is capable of supporting pilot-constructed resolutions, cooperative and non-cooperative maneuvers, and also providing conflict resolution on trajectories forecast by an onboard FMC.
Comparing a Coevolutionary Genetic Algorithm for Multiobjective Optimization
NASA Technical Reports Server (NTRS)
Lohn, Jason D.; Kraus, William F.; Haith, Gary L.; Clancy, Daniel (Technical Monitor)
2002-01-01
We present results from a study comparing a recently developed coevolutionary genetic algorithm (CGA) against a set of evolutionary algorithms using a suite of multiobjective optimization benchmarks. The CGA embodies competitive coevolution and employs a simple, straightforward target population representation and fitness calculation based on developmental theory of learning. Because of these properties, setting up the additional population is trivial making implementation no more difficult than using a standard GA. Empirical results using a suite of two-objective test functions indicate that this CGA performs well at finding solutions on convex, nonconvex, discrete, and deceptive Pareto-optimal fronts, while giving respectable results on a nonuniform optimization. On a multimodal Pareto front, the CGA finds a solution that dominates solutions produced by eight other algorithms, yet the CGA has poor coverage across the Pareto front.
Feature extraction from multiple data sources using genetic programming
NASA Astrophysics Data System (ADS)
Szymanski, John J.; Brumby, Steven P.; Pope, Paul A.; Eads, Damian R.; Esch-Mosher, Diana M.; Galassi, Mark C.; Harvey, Neal R.; McCulloch, Hersey D.; Perkins, Simon J.; Porter, Reid B.; Theiler, James P.; Young, Aaron C.; Bloch, Jeffrey J.; David, Nancy A.
2002-08-01
Feature extraction from imagery is an important and long-standing problem in remote sensing. In this paper, we report on work using genetic programming to perform feature extraction simultaneously from multispectral and digital elevation model (DEM) data. We use the GENetic Imagery Exploitation (GENIE) software for this purpose, which produces image-processing software that inherently combines spatial and spectral processing. GENIE is particularly useful in exploratory studies of imagery, such as one often does in combining data from multiple sources. The user trains the software by painting the feature of interest with a simple graphical user interface. GENIE then uses genetic programming techniques to produce an image-processing pipeline. Here, we demonstrate evolution of image processing algorithms that extract a range of land cover features including towns, wildfire burnscars, and forest. We use imagery from the DOE/NNSA Multispectral Thermal Imager (MTI) spacecraft, fused with USGS 1:24000 scale DEM data.
Feature extraction from multiple data sources using genetic programming.
Szymanski, J. J.; Brumby, Steven P.; Pope, P. A.; Eads, D. R.; Galassi, M. C.; Harvey, N. R.; Perkins, S. J.; Porter, R. B.; Theiler, J. P.; Young, A. C.; Bloch, J. J.; David, N. A.; Esch-Mosher, D. M.
2002-01-01
Feature extration from imagery is an important and long-standing problem in remote sensing. In this paper, we report on work using genetic programming to perform feature extraction simultaneously from multispectral and digital elevation model (DEM) data. The tool used is the GENetic Imagery Exploitation (GENIE) software, which produces image-processing software that inherently combines spatial and spectral processing. GENIE is particularly useful in exploratory studies of imagery, such as one often does in combining data from multiple sources. The user trains the software by painting the feature of interest with a simple graphical user interface. GENIE then uses genetic programming techniques to produce an image-processing pipeline. Here, we demonstrate evolution of image processing algorithms that extract a range of land-cover features including towns, grasslands, wild fire burn scars, and several types of forest. We use imagery from the DOE/NNSA Multispectral Thermal Imager (MTI) spacecraft, fused with USGS 1:24000 scale DEM data.
NASA Astrophysics Data System (ADS)
Jiang, Tianzi; Cui, Qinghua; Shi, Guihua; Ma, Songde
2003-08-01
In this paper, a novel hybrid algorithm combining genetic algorithms and tabu search is presented. In the proposed hybrid algorithm, the idea of tabu search is applied to the crossover operator. We demonstrate that the hybrid algorithm can be applied successfully to the protein folding problem based on a hydrophobic-hydrophilic lattice model. The results show that in all cases the hybrid algorithm works better than a genetic algorithm alone. A comparison with other methods is also made.
A Multi-Objective Genetic Algorithm for Outlier Removal.
Nahum, Oren E; Yosipof, Abraham; Senderowitz, Hanoch
2015-12-28
Quantitative structure activity relationship (QSAR) or quantitative structure property relationship (QSPR) models are developed to correlate activities for sets of compounds with their structure-derived descriptors by means of mathematical models. The presence of outliers, namely, compounds that differ in some respect from the rest of the data set, compromise the ability of statistical methods to derive QSAR models with good prediction statistics. Hence, outliers should be removed from data sets prior to model derivation. Here we present a new multi-objective genetic algorithm for the identification and removal of outliers based on the k nearest neighbors (kNN) method. The algorithm was used to remove outliers from three different data sets of pharmaceutical interest (logBBB, factor 7 inhibitors, and dihydrofolate reductase inhibitors), and its performances were compared with those of five other methods for outlier removal. The results suggest that the new algorithm provides filtered data sets that (1) better maintain the internal diversity of the parent data sets and (2) give rise to QSAR models with much better prediction statistics. Equally good filtered data sets in terms of these metrics were obtained when another objective function was added to the algorithm (termed "preservation"), forcing it to remove certain compounds with low probability only. This option is highly useful when specific compounds should be preferably kept in the final data set either because they have favorable activities or because they represent interesting molecular scaffolds. We expect this new algorithm to be useful in future QSAR applications. PMID:26553402
Optimizing scheduling problem using an estimation of distribution algorithm and genetic algorithm
NASA Astrophysics Data System (ADS)
Qun, Jiang; Yang, Ou; Dong, Shi-Du
2007-12-01
This paper presents a methodology for using heuristic search methods to optimize scheduling problem. Specifically, an Estimation of Distribution Algorithm (EDA)- Population Based Incremental Learning (PBIL), and Genetic Algorithm (GA) have been applied to finding effective arrangement of curriculum schedule of Universities. To our knowledge, EDAs have been applied to fewer real world problems compared to GAs, and the goal of the present paper is to expand the application domain of this technique. The experimental results indicate a good applicability of PBIL to optimize scheduling problem.
Automatic Data Filter Customization Using a Genetic Algorithm
NASA Technical Reports Server (NTRS)
Mandrake, Lukas
2013-01-01
This work predicts whether a retrieval algorithm will usefully determine CO2 concentration from an input spectrum of GOSAT (Greenhouse Gases Observing Satellite). This was done to eliminate needless runtime on atmospheric soundings that would never yield useful results. A space of 50 dimensions was examined for predictive power on the final CO2 results. Retrieval algorithms are frequently expensive to run, and wasted effort defeats requirements and expends needless resources. This algorithm could be used to help predict and filter unneeded runs in any computationally expensive regime. Traditional methods such as the Fischer discriminant analysis and decision trees can attempt to predict whether a sounding will be properly processed. However, this work sought to detect a subsection of the dimensional space that can be simply filtered out to eliminate unwanted runs. LDAs (linear discriminant analyses) and other systems examine the entire data and judge a "best fit," giving equal weight to complex and problematic regions as well as simple, clear-cut regions. In this implementation, a genetic space of "left" and "right" thresholds outside of which all data are rejected was defined. These left/right pairs are created for each of the 50 input dimensions. A genetic algorithm then runs through countless potential filter settings using a JPL computer cluster, optimizing the tossed-out data s yield (proper vs. improper run removal) and number of points tossed. This solution is robust to an arbitrary decision boundary within the data and avoids the global optimization problem of whole-dataset fitting using LDA or decision trees. It filters out runs that would not have produced useful CO2 values to save needless computation. This would be an algorithmic preprocessing improvement to any computationally expensive system.
An implementation of continuous genetic algorithm in parameter estimation of predator-prey model
NASA Astrophysics Data System (ADS)
Windarto
2016-03-01
Genetic algorithm is an optimization method based on the principles of genetics and natural selection in life organisms. The main components of this algorithm are chromosomes population (individuals population), parent selection, crossover to produce new offspring, and random mutation. In this paper, continuous genetic algorithm was implemented to estimate parameters in a predator-prey model of Lotka-Volterra type. For simplicity, all genetic algorithm parameters (selection rate and mutation rate) are set to be constant along implementation of the algorithm. It was found that by selecting suitable mutation rate, the algorithms can estimate these parameters well.
High-Speed General Purpose Genetic Algorithm Processor.
Hoseini Alinodehi, Seyed Pourya; Moshfe, Sajjad; Saber Zaeimian, Masoumeh; Khoei, Abdollah; Hadidi, Khairollah
2016-07-01
In this paper, an ultrafast steady-state genetic algorithm processor (GAP) is presented. Due to the heavy computational load of genetic algorithms (GAs), they usually take a long time to find optimum solutions. Hardware implementation is a significant approach to overcome the problem by speeding up the GAs procedure. Hence, we designed a digital CMOS implementation of GA in [Formula: see text] process. The proposed processor is not bounded to a specific application. Indeed, it is a general-purpose processor, which is capable of performing optimization in any possible application. Utilizing speed-boosting techniques, such as pipeline scheme, parallel coarse-grained processing, parallel fitness computation, parallel selection of parents, dual-population scheme, and support for pipelined fitness computation, the proposed processor significantly reduces the processing time. Furthermore, by relying on a built-in discard operator the proposed hardware may be used in constrained problems that are very common in control applications. In the proposed design, a large search space is achievable through the bit string length extension of individuals in the genetic population by connecting the 32-bit GAPs. In addition, the proposed processor supports parallel processing, in which the GAs procedure can be run on several connected processors simultaneously. PMID:26241984
Longest jobs first algorithm in solving job shop scheduling using adaptive genetic algorithm (GA)
NASA Astrophysics Data System (ADS)
Alizadeh Sahzabi, Vahid; Karimi, Iman; Alizadeh Sahzabi, Navid; Mamaani Barnaghi, Peiman
2011-12-01
In this paper, genetic algorithm was used to solve job shop scheduling problems. One example discussed in JSSP (Job Shop Scheduling Problem) and I described how we can solve such these problems by genetic algorithm. The goal in JSSP is to gain the shortest process time. Furthermore I proposed a method to obtain best performance on performing all jobs in shortest time. The method mainly, is according to Genetic algorithm (GA) and crossing over between parents always follows the rule which the longest process is at the first in the job queue. In the other word chromosomes is suggested to sorts based on the longest processes to shortest i.e. "longest job first" says firstly look which machine contains most processing time during its performing all its jobs and that is the bottleneck. Secondly, start sort those jobs which are belonging to that specific machine descending. Based on the achieved results," longest jobs first" is the optimized status in job shop scheduling problems. In our results the accuracy would grow up to 94.7% for total processing time and the method improved 4% the accuracy of performing all jobs in the presented example.
Longest jobs first algorithm in solving job shop scheduling using adaptive genetic algorithm (GA)
NASA Astrophysics Data System (ADS)
Alizadeh Sahzabi, Vahid; Karimi, Iman; Alizadeh Sahzabi, Navid; Mamaani Barnaghi, Peiman
2012-01-01
In this paper, genetic algorithm was used to solve job shop scheduling problems. One example discussed in JSSP (Job Shop Scheduling Problem) and I described how we can solve such these problems by genetic algorithm. The goal in JSSP is to gain the shortest process time. Furthermore I proposed a method to obtain best performance on performing all jobs in shortest time. The method mainly, is according to Genetic algorithm (GA) and crossing over between parents always follows the rule which the longest process is at the first in the job queue. In the other word chromosomes is suggested to sorts based on the longest processes to shortest i.e. "longest job first" says firstly look which machine contains most processing time during its performing all its jobs and that is the bottleneck. Secondly, start sort those jobs which are belonging to that specific machine descending. Based on the achieved results," longest jobs first" is the optimized status in job shop scheduling problems. In our results the accuracy would grow up to 94.7% for total processing time and the method improved 4% the accuracy of performing all jobs in the presented example.
Models, algorithms and programs for phylogeny reconciliation.
Doyon, Jean-Philippe; Ranwez, Vincent; Daubin, Vincent; Berry, Vincent
2011-09-01
Gene sequences contain a gold mine of phylogenetic information. But unfortunately for taxonomists this information does not only tell the story of the species from which it was collected. Genes have their own complex histories which record speciation events, of course, but also many other events. Among them, gene duplications, transfers and losses are especially important to identify. These events are crucial to account for when reconstructing the history of species, and they play a fundamental role in the evolution of genomes, the diversification of organisms and the emergence of new cellular functions. We review reconciliations between gene and species trees, which are rigorous approaches for identifying duplications, transfers and losses that mark the evolution of a gene family. Existing reconciliation models and algorithms are reviewed and difficulties in modeling gene transfers are discussed. We also compare different reconciliation programs along with their advantages and disadvantages. PMID:21949266
A Hybrid Metaheuristic for Biclustering Based on Scatter Search and Genetic Algorithms
NASA Astrophysics Data System (ADS)
Nepomuceno, Juan A.; Troncoso, Alicia; Aguilar–Ruiz, Jesús S.
In this paper a hybrid metaheuristic for biclustering based on Scatter Search and Genetic Algorithms is presented. A general scheme of Scatter Search has been used to obtain high-quality biclusters, but a way of generating the initial population and a method of combination based on Genetic Algorithms have been chosen. Experimental results from yeast cell cycle and human B-cell lymphoma are reported. Finally, the performance of the proposed hybrid algorithm is compared with a genetic algorithm recently published.
Ebtehaj, Isa; Bonakdari, Hossein
2014-01-01
The existence of sediments in wastewater greatly affects the performance of the sewer and wastewater transmission systems. Increased sedimentation in wastewater collection systems causes problems such as reduced transmission capacity and early combined sewer overflow. The article reviews the performance of the genetic algorithm (GA) and imperialist competitive algorithm (ICA) in minimizing the target function (mean square error of observed and predicted Froude number). To study the impact of bed load transport parameters, using four non-dimensional groups, six different models have been presented. Moreover, the roulette wheel selection method is used to select the parents. The ICA with root mean square error (RMSE) = 0.007, mean absolute percentage error (MAPE) = 3.5% show better results than GA (RMSE = 0.007, MAPE = 5.6%) for the selected model. All six models return better results than the GA. Also, the results of these two algorithms were compared with multi-layer perceptron and existing equations. PMID:25429460
The mGA1.0: A common LISP implementation of a messy genetic algorithm
NASA Technical Reports Server (NTRS)
Goldberg, David E.; Kerzic, Travis
1990-01-01
Genetic algorithms (GAs) are finding increased application in difficult search, optimization, and machine learning problems in science and engineering. Increasing demands are being placed on algorithm performance, and the remaining challenges of genetic algorithm theory and practice are becoming increasingly unavoidable. Perhaps the most difficult of these challenges is the so-called linkage problem. Messy GAs were created to overcome the linkage problem of simple genetic algorithms by combining variable-length strings, gene expression, messy operators, and a nonhomogeneous phasing of evolutionary processing. Results on a number of difficult deceptive test functions are encouraging with the mGA always finding global optima in a polynomial number of function evaluations. Theoretical and empirical studies are continuing, and a first version of a messy GA is ready for testing by others. A Common LISP implementation called mGA1.0 is documented and related to the basic principles and operators developed by Goldberg et. al. (1989, 1990). Although the code was prepared with care, it is not a general-purpose code, only a research version. Important data structures and global variations are described. Thereafter brief function descriptions are given, and sample input data are presented together with sample program output. A source listing with comments is also included.
Fringe Pattern Demodulation by Independent Windows Fitting Using Genetic Algorithms
NASA Astrophysics Data System (ADS)
Toledo, L. E.; Cuevas, F. J.
2008-04-01
It is presented a new method to retrieve the phase map from a fringe pattern with closed and sub-sampled fringes. The Fringe Processing on Independent Windows method (FPIW) find a parametric function that estimate the phase of a given segmented region that comes from the fringe pattern. FPIW method is a modification of the Window Fringe Pattern Demodulation technique (WFPD), that uses a genetic algorithm to find the parametric function. A population of randomly generated chromosomes, that codifies different parametric functions, is used by the genetic algorithm to simulate natural selection. A fitness value is associated to all chromosomes by a function that uses two criterion in FPIW method: fringe similarity between the segmented interferogram and the fringe pattern generated by the cosine of the phase given by the parametric function, and the smoothness of these function. The best chromosome produced by the evolution is decoded to obtain the parametric function that estimates the phase in a given region. The genetic algorithm is applied on a set of partially overlapped windows extracted from the original fringe pattern. The independent phases obtained by the GA's, are used to reconstruct the whole phase field. A given window is chosen to be the reference. Phase in adjacent windows is spliced with the phase in the reference window to form a phase map of the joined regions. The RMS value between reference phase and adjacent phase is minimized in the overlapped area to find the DC bias and the correct concavity of the adjacent phase, so continuity between reference and adjacent spliced phase is assured. The new phase map is used as the new reference. This process is repeated until the whole phase map is reconstructed.
Genetic algorithms for the construction of D-optimal designs
Heredia-Langner, Alejandro; Carlyle, W M.; Montgomery, D C.; Borror, Connie M.; Runger, George C.
2003-01-01
Computer-generated designs are useful for situations where standard factorial, fractional factorial or response surface designs cannot be easily employed. Alphabetically-optimal designs are the most widely used type of computer-generated designs, and of these, the D-optimal (or D-efficient) class of designs are extremely popular. D-optimal designs are usually constructed by algorithms that sequentially add and delete points from a potential design based using a candidate set of points spaced over the region of interest. We present a technique to generate D-efficient designs using genetic algorithms (GA). This approach eliminates the need to explicitly consider a candidate set of experimental points and it can handle highly constrained regions while maintaining a level of performance comparable to more traditional design construction techniques.
Genetic Algorithms: A New Method for Neutron Beam Spectral Characterization
David W. Freeman
2000-06-04
A revolutionary new concept for solving the neutron spectrum unfolding problem using genetic algorithms (GAs) has recently been introduced. GAs are part of a new field of evolutionary solution techniques that mimic living systems with computer-simulated chromosome solutions that mate, mutate, and evolve to create improved solutions. The original motivation for the research was to improve spectral characterization of neutron beams associated with boron neutron capture therapy (BNCT). The GA unfolding technique has been successfully applied to problems with moderate energy resolution (up to 47 energy groups). Initial research indicates that the GA unfolding technique may well be superior to popular unfolding methods in common use. Research now under way at Kansas State University is focused on optimizing the unfolding algorithm and expanding its energy resolution to unfold detailed beam spectra based on multiple foil measurements. Indications are that the final code will significantly outperform current, state-of-the-art codes in use by the scientific community.
A genetic algorithm based method for docking flexible molecules
Judson, R.S.; Jaeger, E.P.; Treasurywala, A.M.
1993-11-01
The authors describe a computational method for docking flexible molecules into protein binding sites. The method uses a genetic algorithm (GA) to search the combined conformation/orientation space of the molecule to find low energy conformation. Several techniques are described that increase the efficiency of the basic search method. These include the use of several interacting GA subpopulations or niches; the use of a growing algorithm that initially docks only a small part of the molecule; and the use of gradient minimization during the search. To illustrate the method, they dock Cbz-GlyP-Leu-Leu (ZGLL) into thermolysin. This system was chosen because a well refined crystal structure is available and because another docking method had previously been tested on this system. Their method is able to find conformations that lie physically close to and in some cases lower in energy than the crystal conformation in reasonable periods of time on readily available hardware.
Genetic algorithm for multiple bus line coordination on urban arterial.
Yang, Zhen; Wang, Wei; Chen, Shuyan; Ding, Haoyang; Li, Xiaowei
2015-01-01
Bus travel time on road section is defined and analyzed with the effect of multiple bus lines. An analytical model is formulated to calculate the total red time a bus encounters when travelling along the arterial. Genetic algorithm is used to optimize the offset scheme of traffic signals to minimize the total red time that all bus lines encounter in two directions of the arterial. The model and algorithm are applied to the major part of Zhongshan North Street in the city of Nanjing. The results show that the methods in this paper can reduce total red time of all the bus lines by 31.9% on the object arterial and thus improve the traffic efficiency of the whole arterial and promote public transport priority. PMID:25663837
An Island Grouping Genetic Algorithm for Fuzzy Partitioning Problems
Salcedo-Sanz, S.; Del Ser, J.; Geem, Z. W.
2014-01-01
This paper presents a novel fuzzy clustering technique based on grouping genetic algorithms (GGAs), which are a class of evolutionary algorithms especially modified to tackle grouping problems. Our approach hinges on a GGA devised for fuzzy clustering by means of a novel encoding of individuals (containing elements and clusters sections), a new fitness function (a superior modification of the Davies Bouldin index), specially tailored crossover and mutation operators, and the use of a scheme based on a local search and a parallelization process, inspired from an island-based model of evolution. The overall performance of our approach has been assessed over a number of synthetic and real fuzzy clustering problems with different objective functions and distance measures, from which it is concluded that the proposed approach shows excellent performance in all cases. PMID:24977235
Application of genetic algorithms to tuning fuzzy control systems
NASA Technical Reports Server (NTRS)
Espy, Todd; Vombrack, Endre; Aldridge, Jack
1993-01-01
Real number genetic algorithms (GA) were applied for tuning fuzzy membership functions of three controller applications. The first application is our 'Fuzzy Pong' demonstration, a controller that controls a very responsive system. The performance of the automatically tuned membership functions exceeded that of manually tuned membership functions both when the algorithm started with randomly generated functions and with the best manually-tuned functions. The second GA tunes input membership functions to achieve a specified control surface. The third application is a practical one, a motor controller for a printed circuit manufacturing system. The GA alters the positions and overlaps of the membership functions to accomplish the tuning. The applications, the real number GA approach, the fitness function and population parameters, and the performance improvements achieved are discussed. Directions for further research in tuning input and output membership functions and in tuning fuzzy rules are described.
Rabow, A. A.; Scheraga, H. A.
1996-01-01
We have devised a Cartesian combination operator and coding scheme for improving the performance of genetic algorithms applied to the protein folding problem. The genetic coding consists of the C alpha Cartesian coordinates of the protein chain. The recombination of the genes of the parents is accomplished by: (1) a rigid superposition of one parent chain on the other, to make the relation of Cartesian coordinates meaningful, then, (2) the chains of the children are formed through a linear combination of the coordinates of their parents. The children produced with this Cartesian combination operator scheme have similar topology and retain the long-range contacts of their parents. The new scheme is significantly more efficient than the standard genetic algorithm methods for locating low-energy conformations of proteins. The considerable superiority of genetic algorithms over Monte Carlo optimization methods is also demonstrated. We have also devised a new dynamic programming lattice fitting procedure for use with the Cartesian combination operator method. The procedure finds excellent fits of real-space chains to the lattice while satisfying bond-length, bond-angle, and overlap constraints. PMID:8880904
Autosegmentation of ultrasonic images by the genetic algorithm
NASA Astrophysics Data System (ADS)
Jiang, Ching-Fen
2001-07-01
The textural-feature-based segmentation methods were widely applied to the segmentation problems of ultrasonic images. However the manual selection of textural features in the previous approaches not only makes these segmentation methods inadaptable but could lead to the results with bias. Herein we propose an auto-feature-selection algorithm to solve the problems. This algorithm includes three steps: The feature library composed of 32 textural features was established at first. The genetic algorithm was then used to auto-select the features and give each of them different weight according to their importance. The fitness of each gene was evaluated by five factors including region dissimilarity, number of edge points, edge fragmentation, edge thickness, and curvature. Finally, K-means process classified the image into 3 different tissues using the selected features with different weights. The segmentation outcomes of various ultrasonic images by this auto-feature selection algorithm have shown better correspondence with human comprehension in comparison with the results of previous works. In addition, it provides a more adaptive way to adjust the weight of the features used for clustering process and therefore to avoid takeover by the big-value features. This problem has been paid little attention in the traditional K-means process in which all the features have the same weight.
Eliciting spatial statistics from geological experts using genetic algorithms
NASA Astrophysics Data System (ADS)
Walker, Matthew; Curtis, Andrew
2014-07-01
A new method to obtain the statistics of a geostatistical model is introduced. The method elicits the statistical information from a geological expert directly, by iteratively updating a population of vectors of statistics, based on the expert's subjective opinion of the corresponding geological simulations. Thus, it does not require the expert to have knowledge of the mathematical and statistical details of the model. The process uses a genetic algorithm to generate new vectors. We demonstrate the methodology for a particular geostatistical model used to model rock pore-space, which simulates the spatial distribution of matrix and pores over a 2-D grid, using multipoint statistics specified by conditional probabilities. Experts were asked to use the algorithm to estimate the statistics of a given target pore-space image with known statistics; thus, their numerical rates of convergence could be calculated. Convergence was measured for all experts, showing that the algorithm can be used to find appropriate probabilities given the expert's subjective input. However, considerable and apparently irreducible residual misfit was found between the true statistics and the estimates of statistics obtained by the experts, with the root-mean-square error on the conditional probabilities typically >0.1. This is interpreted as the limit of the experts' abilities to distinguish between realizations of different spatial statistics using the algorithm. More accurate discrimination is therefore likely to require complementary elicitation techniques or sources of information independent of expert opinion.
Optimization in optical systems revisited: Beyond genetic algorithms
NASA Astrophysics Data System (ADS)
Gagnon, Denis; Dumont, Joey; Dubé, Louis
2013-05-01
Designing integrated photonic devices such as waveguides, beam-splitters and beam-shapers often requires optimization of a cost function over a large solution space. Metaheuristics - algorithms based on empirical rules for exploring the solution space - are specifically tailored to those problems. One of the most widely used metaheuristics is the standard genetic algorithm (SGA), based on the evolution of a population of candidate solutions. However, the stochastic nature of the SGA sometimes prevents access to the optimal solution. Our goal is to show that a parallel tabu search (PTS) algorithm is more suited to optimization problems in general, and to photonics in particular. PTS is based on several search processes using a pool of diversified initial solutions. To assess the performance of both algorithms (SGA and PTS), we consider an integrated photonics design problem, the generation of arbitrary beam profiles using a two-dimensional waveguide-based dielectric structure. The authors acknowledge financial support from the Natural Sciences and Engineering Research Council of Canada (NSERC).
Full design of fuzzy controllers using genetic algorithms
NASA Technical Reports Server (NTRS)
Homaifar, Abdollah; Mccormick, ED
1992-01-01
This paper examines the applicability of genetic algorithms (GA) in the complete design of fuzzy logic controllers. While GA has been used before in the development of rule sets or high performance membership functions, the interdependence between these two components dictates that they should be designed together simultaneously. GA is fully capable of creating complete fuzzy controllers given the equations of motion of the system, eliminating the need for human input in the design loop. We show the application of this new method to the development of a cart controller.
Genetic Algorithm based Decentralized PI Type Controller: Load Frequency Control
NASA Astrophysics Data System (ADS)
Dwivedi, Atul; Ray, Goshaidas; Sharma, Arun Kumar
2016-05-01
This work presents a design of decentralized PI type Linear Quadratic (LQ) controller based on genetic algorithm (GA). The proposed design technique allows considerable flexibility in defining the control objectives and it does not consider any knowledge of the system matrices and moreover it avoids the solution of algebraic Riccati equation. To illustrate the results of this work, a load-frequency control problem is considered. Simulation results reveal that the proposed scheme based on GA is an alternative and attractive approach to solve load-frequency control problem from both performance and design point of views.
Optimal brushless DC motor design using genetic algorithms
NASA Astrophysics Data System (ADS)
Rahideh, A.; Korakianitis, T.; Ruiz, P.; Keeble, T.; Rothman, M. T.
2010-11-01
This paper presents a method for the optimal design of a slotless permanent magnet brushless DC (BLDC) motor with surface mounted magnets using a genetic algorithm. Characteristics of the motor are expressed as functions of motor geometries. The objective function is a combination of losses, volume and cost to be minimized simultaneously. Electrical and mechanical requirements (i.e. voltage, torque and speed) and other limitations (e.g. upper and lower limits of the motor geometries) are cast into constraints of the optimization problem. One sample case is used to illustrate the design and optimization technique.
Evaluation of Mechanical Losses in Piezoelectric Plates using Genetic algorithm
NASA Astrophysics Data System (ADS)
Arnold, F. J.; Gonçalves, M. S.; Massaro, F. R.; Martins, P. S.
Numerical methods are used for the characterization of piezoelectric ceramics. A procedure based on genetic algorithm is applied to find the physical coefficients and mechanical losses. The coefficients are estimated from a minimum scoring of cost function. Electric impedances are calculated from Mason's model including mechanical losses constant and dependent on frequency as a linear function. The results show that the electric impedance percentage error in the investigated interval of frequencies decreases when mechanical losses depending on frequency are inserted in the model. A more accurate characterization of the piezoelectric ceramics mechanical losses should be considered as frequency dependent.
Simulating and Synthesizing Substructures Using Neural Network and Genetic Algorithms
NASA Technical Reports Server (NTRS)
Liu, Youhua; Kapania, Rakesh K.; VanLandingham, Hugh F.
1997-01-01
The feasibility of simulating and synthesizing substructures by computational neural network models is illustrated by investigating a statically indeterminate beam, using both a 1-D and a 2-D plane stress modelling. The beam can be decomposed into two cantilevers with free-end loads. By training neural networks to simulate the cantilever responses to different loads, the original beam problem can be solved as a match-up between two subsystems under compatible interface conditions. The genetic algorithms are successfully used to solve the match-up problem. Simulated results are found in good agreement with the analytical or FEM solutions.
Application of Genetic Algorithms in Nonlinear Heat Conduction Problems
Khan, Waqar A.
2014-01-01
Genetic algorithms are employed to optimize dimensionless temperature in nonlinear heat conduction problems. Three common geometries are selected for the analysis and the concept of minimum entropy generation is used to determine the optimum temperatures under the same constraints. The thermal conductivity is assumed to vary linearly with temperature while internal heat generation is assumed to be uniform. The dimensionless governing equations are obtained for each selected geometry and the dimensionless temperature distributions are obtained using MATLAB. It is observed that GA gives the minimum dimensionless temperature in each selected geometry. PMID:24695517
Random search optimization based on genetic algorithm and discriminant function
NASA Technical Reports Server (NTRS)
Kiciman, M. O.; Akgul, M.; Erarslanoglu, G.
1990-01-01
The general problem of optimization with arbitrary merit and constraint functions, which could be convex, concave, monotonic, or non-monotonic, is treated using stochastic methods. To improve the efficiency of the random search methods, a genetic algorithm for the search phase and a discriminant function for the constraint-control phase were utilized. The validity of the technique is demonstrated by comparing the results to published test problem results. Numerical experimentation indicated that for cases where a quick near optimum solution is desired, a general, user-friendly optimization code can be developed without serious penalties in both total computer time and accuracy.
Parameterization of interatomic potential by genetic algorithms: A case study
Ghosh, Partha S. Arya, A.; Dey, G. K.; Ranawat, Y. S.
2015-06-24
A framework for Genetic Algorithm based methodology is developed to systematically obtain and optimize parameters for interatomic force field functions for MD simulations by fitting to a reference data base. This methodology is applied to the fitting of ThO{sub 2} (CaF{sub 2} prototype) – a representative of ceramic based potential fuel for nuclear applications. The resulting GA optimized parameterization of ThO{sub 2} is able to capture basic structural, mechanical, thermo-physical properties and also describes defect structures within the permissible range.
Applications of genetic algorithms and neural networks to interatomic potentials
NASA Astrophysics Data System (ADS)
Hobday, Steven; Smith, Roger; BelBruno, Joe
1999-06-01
Applications of two modern artificial intelligence (AI) techniques, genetic algorithms (GA) and neural networks (NN) to computer simulations are reported. It is shown that the GA are very useful tools for determining the minimum energy structures of clusters of atoms described by interatomic potential functions and generally outperform other optimisation methods for this task. A number of applications are given including covalent, and close packed structures of single or multi-component atomic species. It is also shown that (many body) interatomic potential functions for multi-component systems can be derived by training a specially constructed NN on a variety of structural data.
A Comparison of Genetic Programming Variants for Hyper-Heuristics
Harris, Sean
2015-03-01
Modern society is faced with ever more complex problems, many of which can be formulated as generate-and-test optimization problems. General-purpose optimization algorithms are not well suited for real-world scenarios where many instances of the same problem class need to be repeatedly and efficiently solved, such as routing vehicles over highways with constantly changing traffic flows, because they are not targeted to a particular scenario. Hyper-heuristics automate the design of algorithms to create a custom algorithm for a particular scenario. Hyper-heuristics typically employ Genetic Programming (GP) and this project has investigated the relationship between the choice of GP and performance in Hyper-heuristics. Results are presented demonstrating the existence of problems for which there is a statistically significant performance differential between the use of different types of GP.
NASA Technical Reports Server (NTRS)
Kobayashi, Takahisa; Simon, Donald L.
2002-01-01
As part of the NASA Aviation Safety Program, a unique model-based diagnostics method that employs neural networks and genetic algorithms for aircraft engine performance diagnostics has been developed and demonstrated at the NASA Glenn Research Center against a nonlinear gas turbine engine model. Neural networks are applied to estimate the internal health condition of the engine, and genetic algorithms are used for sensor fault detection, isolation, and quantification. This hybrid architecture combines the excellent nonlinear estimation capabilities of neural networks with the capability to rank the likelihood of various faults given a specific sensor suite signature. The method requires a significantly smaller data training set than a neural network approach alone does, and it performs the combined engine health monitoring objectives of performance diagnostics and sensor fault detection and isolation in the presence of nominal and degraded engine health conditions.
Peng, Bin; Liu, Ke-ling; Li, Zhi-min; Wang, Yue-song; Huang, Tu-jiang
2002-06-01
Genetic algorithm (GA) is used in automatic qualitative analysis by a sequential inductively coupled plasma spectrometer (ICP-AES) and a computer program is developed in this paper. No any standard samples are needed, and spectroscopic interferences can be eliminated. All elements and their concentration ranges of an unknown sample can be reported. The replication rate Pr, crossover rate Pc, and mutation rate of the genetic algorithm were adjusted to be 0.6, 0.4 and 0 respectively. The analytical results of GA are in good agreement with the reference values. It indicates that, combined with the intensity information, the GA can be applied to spectroscopic qualitative analysis and expected to become an effective method in qualitative analysis in ICP-AES after further work. PMID:12938334
Soewono, C. N.; Takaki, N.
2012-07-01
In this work genetic algorithm was proposed to solve fuel loading pattern optimization problem in thorium fueled heavy water reactor. The objective function of optimization was to maximize the conversion ratio and minimize power peaking factor. Those objectives were simultaneously optimized using non-dominated Pareto-based population ranking optimal method. Members of non-dominated population were assigned selection probabilities based on their rankings in a manner similar to Baker's single criterion ranking selection procedure. A selected non-dominated member was bred through simple mutation or one-point crossover process to produce a new member. The genetic algorithm program was developed in FORTRAN 90 while neutronic calculation and analysis was done by COREBN code, a module of core burn-up calculation for SRAC. (authors)
Structural health monitoring feature design by genetic programming
NASA Astrophysics Data System (ADS)
Harvey, Dustin Y.; Todd, Michael D.
2014-09-01
Structural health monitoring (SHM) systems provide real-time damage and performance information for civil, aerospace, and other high-capital or life-safety critical structures. Conventional data processing involves pre-processing and extraction of low-dimensional features from in situ time series measurements. The features are then input to a statistical pattern recognition algorithm to perform the relevant classification or regression task necessary to facilitate decisions by the SHM system. Traditional design of signal processing and feature extraction algorithms can be an expensive and time-consuming process requiring extensive system knowledge and domain expertise. Genetic programming, a heuristic program search method from evolutionary computation, was recently adapted by the authors to perform automated, data-driven design of signal processing and feature extraction algorithms for statistical pattern recognition applications. The proposed method, called Autofead, is particularly suitable to handle the challenges inherent in algorithm design for SHM problems where the manifestation of damage in structural response measurements is often unclear or unknown. Autofead mines a training database of response measurements to discover information-rich features specific to the problem at hand. This study provides experimental validation on three SHM applications including ultrasonic damage detection, bearing damage classification for rotating machinery, and vibration-based structural health monitoring. Performance comparisons with common feature choices for each problem area are provided demonstrating the versatility of Autofead to produce significant algorithm improvements on a wide range of problems.
Echoed time series predictions, neural networks and genetic algorithms
NASA Astrophysics Data System (ADS)
Conway, A.
This work aims to illustrate a potentially serious and previously unrecognised problem in using Neural Networks (NNs), and possibly other techniques, to predict Time Series (TS). It also demonstrates how a new training scheme using a genetic algorithm can alleviate this problem. Although it is already established that NNs can predict TS such as Sunspot Number (SSN) with reasonable success, the accuracy of these predictions is often judged solely by an RMS or related error. The use of this type of error overlooks the presence of what we have termed echoing, where the NN outputs its most recent input as its prediction. Therefore, a method of detecting echoed predictions is introduced, called time-shifting. Reasons for the presence of echo are discussed and then related to the choice of TS sampling. Finally, a new specially designed training scheme is described, which is a hybrid of a genetic algorithm search and back propagation. With this method we have successfully trained NNs to predict without any echo.
Internal Lattice Reconfiguration for Diversity Tuning in Cellular Genetic Algorithms
Morales-Reyes, Alicia; Erdogan, Ahmet T.
2012-01-01
Cellular Genetic Algorithms (cGAs) have attracted the attention of researchers due to their high performance, ease of implementation and massive parallelism. Maintaining an adequate balance between exploitative and explorative search is essential when studying evolutionary optimization techniques. In this respect, cGAs inherently possess a number of structural configuration parameters that are able to sustain diversity during evolution. In this study, the internal reconfiguration of the lattice is proposed to constantly or adaptively control the exploration-exploitation trade-off. Genetic operators are characterized in their simplest form since algorithmic performance is assessed on implemented reconfiguration mechanisms. Moreover, internal reconfiguration allows the adjacency of individuals to be maintained. Hence, any improvement in performance is only a consequence of topological changes. Two local selection methods presenting opposite selection pressures are used in order to evaluate the influence of the proposed techniques. Problems ranging from continuous to real world and combinatorial are tackled. Empirical results are supported statistically in terms of efficiency and efficacy. PMID:22859973
Generation of Compliant Mechanisms using Hybrid Genetic Algorithm
NASA Astrophysics Data System (ADS)
Sharma, D.; Deb, K.
2014-10-01
Compliant mechanism is a single piece elastic structure which can deform to perform the assigned task. In this work, compliant mechanisms are evolved using a constraint based bi-objective optimization formulation which requires one user defined parameter ( η). This user defined parameter limits a gap between a desired path and an actual path traced by the compliant mechanism. The non-linear and discrete optimization problems are solved using the hybrid Genetic Algorithm (GA) wherein domain specific initialization, two-dimensional crossover operator and repairing techniques are adopted. A bit-wise local search method is used with elitist non-dominated sorting genetic algorithm to further refine the compliant mechanisms. Parallel computations are performed on the master-slave architecture to reduce the computation time. A parametric study is carried out for η value which suggests a range to evolve topologically different compliant mechanisms. The applied and boundary conditions to the compliant mechanisms are considered the variables that are evolved by the hybrid GA. The post-analysis of results unveils that the complaint mechanisms are always supported at unique location that can evolve the non-dominated solutions.
Road Detection by Neural and Genetic Algorithm in Urban Environment
NASA Astrophysics Data System (ADS)
Barsi, A.
2012-07-01
In the urban object detection challenge organized by the ISPRS WG III/4 high geometric and radiometric resolution aerial images about Vaihingen/Stuttgart, Germany are distributed. The acquired data set contains optical false color, near infrared images and airborne laserscanning data. The presented research focused exclusively on the optical image, so the elevation information was ignored. The road detection procedure has been built up of two main phases: a segmentation done by neural networks and a compilation made by genetic algorithms. The applied neural networks were support vector machines with radial basis kernel function and self-organizing maps with hexagonal network topology and Euclidean distance function for neighborhood management. The neural techniques have been compared by hyperbox classifier, known from the statistical image classification practice. The compilation of the segmentation is realized by a novel application of the common genetic algorithm and by differential evolution technique. The genes were implemented to detect the road elements by evaluating a special binary fitness function. The results have proven that the evolutional technique can automatically find major road segments.
Feature Subset Selection, Class Separability, and Genetic Algorithms
Cantu-Paz, E
2004-01-21
The performance of classification algorithms in machine learning is affected by the features used to describe the labeled examples presented to the inducers. Therefore, the problem of feature subset selection has received considerable attention. Genetic approaches to this problem usually follow the wrapper approach: treat the inducer as a black box that is used to evaluate candidate feature subsets. The evaluations might take a considerable time and the traditional approach might be unpractical for large data sets. This paper describes a hybrid of a simple genetic algorithm and a method based on class separability applied to the selection of feature subsets for classification problems. The proposed hybrid was compared against each of its components and two other feature selection wrappers that are used widely. The objective of this paper is to determine if the proposed hybrid presents advantages over the other methods in terms of accuracy or speed in this problem. The experiments used a Naive Bayes classifier and public-domain and artificial data sets. The experiments suggest that the hybrid usually finds compact feature subsets that give the most accurate results, while beating the execution time of the other wrappers.
Actuator Placement Via Genetic Algorithm for Aircraft Morphing
NASA Technical Reports Server (NTRS)
Crossley, William A.; Cook, Andrea M.
2001-01-01
This research continued work that began under the support of NASA Grant NAG1-2119. The focus of this effort was to continue investigations of Genetic Algorithm (GA) approaches that could be used to solve an actuator placement problem by treating this as a discrete optimization problem. In these efforts, the actuators are assumed to be "smart" devices that change the aerodynamic shape of an aircraft wing to alter the flow past the wing, and, as a result, provide aerodynamic moments that could provide flight control. The earlier work investigated issued for the problem statement, developed the appropriate actuator modeling, recognized the importance of symmetry for this problem, modified the aerodynamic analysis routine for more efficient use with the genetic algorithm, and began a problem size study to measure the impact of increasing problem complexity. The research discussed in this final summary further investigated the problem statement to provide a "combined moment" problem statement to simultaneously address roll, pitch and yaw. Investigations of problem size using this new problem statement provided insight into performance of the GA as the number of possible actuator locations increased. Where previous investigations utilized a simple wing model to develop the GA approach for actuator placement, this research culminated with application of the GA approach to a high-altitude unmanned aerial vehicle concept to demonstrate that the approach is valid for an aircraft configuration.
An Introduction to Genetic Algorithms and to Their Use in Information Retrieval.
ERIC Educational Resources Information Center
Jones, Gareth; And Others
1994-01-01
Genetic algorithms, a class of nondeterministic algorithms in which the role of chance makes the precise nature of a solution impossible to guarantee, seem to be well suited to combinatorial-optimization problems in information retrieval. Provides an introduction to techniques and characteristics of genetic algorithms and illustrates their…
Combining neural networks and genetic algorithms for hydrological flow forecasting
NASA Astrophysics Data System (ADS)
Neruda, Roman; Srejber, Jan; Neruda, Martin; Pascenko, Petr
2010-05-01
We present a neural network approach to rainfall-runoff modeling for small size river basins based on several time series of hourly measured data. Different neural networks are considered for short time runoff predictions (from one to six hours lead time) based on runoff and rainfall data observed in previous time steps. Correlation analysis shows that runoff data, short time rainfall history, and aggregated API values are the most significant data for the prediction. Neural models of multilayer perceptron and radial basis function networks with different numbers of units are used and compared with more traditional linear time series predictors. Out of possible 48 hours of relevant history of all the input variables, the most important ones are selected by means of input filters created by a genetic algorithm. The genetic algorithm works with population of binary encoded vectors defining input selection patterns. Standard genetic operators of two-point crossover, random bit-flipping mutation, and tournament selection were used. The evaluation of objective function of each individual consists of several rounds of building and testing a particular neural network model. The whole procedure is rather computational exacting (taking hours to days on a desktop PC), thus a high-performance mainframe computer has been used for our experiments. Results based on two years worth data from the Ploucnice river in Northern Bohemia suggest that main problems connected with this approach to modeling are ovetraining that can lead to poor generalization, and relatively small number of extreme events which makes it difficult for a model to predict the amplitude of the event. Thus, experiments with both absolute and relative runoff predictions were carried out. In general it can be concluded that the neural models show about 5 per cent improvement in terms of efficiency coefficient over liner models. Multilayer perceptrons with one hidden layer trained by back propagation algorithm and
An Evolved Wavelet Library Based on Genetic Algorithm
Vaithiyanathan, D.; Seshasayanan, R.; Kunaraj, K.; Keerthiga, J.
2014-01-01
As the size of the images being captured increases, there is a need for a robust algorithm for image compression which satiates the bandwidth limitation of the transmitted channels and preserves the image resolution without considerable loss in the image quality. Many conventional image compression algorithms use wavelet transform which can significantly reduce the number of bits needed to represent a pixel and the process of quantization and thresholding further increases the compression. In this paper the authors evolve two sets of wavelet filter coefficients using genetic algorithm (GA), one for the whole image portion except the edge areas and the other for the portions near the edges in the image (i.e., global and local filters). Images are initially separated into several groups based on their frequency content, edges, and textures and the wavelet filter coefficients are evolved separately for each group. As there is a possibility of the GA settling in local maximum, we introduce a new shuffling operator to prevent the GA from this effect. The GA used to evolve filter coefficients primarily focuses on maximizing the peak signal to noise ratio (PSNR). The evolved filter coefficients by the proposed method outperform the existing methods by a 0.31 dB improvement in the average PSNR and a 0.39 dB improvement in the maximum PSNR. PMID:25405225
Integrating GIS and genetic algorithms for automating land partitioning
NASA Astrophysics Data System (ADS)
Demetriou, Demetris; See, Linda; Stillwell, John
2014-08-01
Land consolidation is considered to be the most effective land management planning approach for controlling land fragmentation and hence improving agricultural efficiency. Land partitioning is a basic process of land consolidation that involves the subdivision of land into smaller sub-spaces subject to a number of constraints. This paper explains the development of a module called LandParcelS (Land Parcelling System) that integrates geographical information systems and a genetic algorithm to automate the land partitioning process by designing and optimising land parcels in terms of their shape, size and value. This new module has been applied to two land blocks that are part of a larger case study area in Cyprus. Partitioning is carried out by guiding a Thiessen polygon process within ArcGIS and it is treated as a multiobjective problem. The results suggest that a step forward has been made in solving this complex spatial problem, although further research is needed to improve the algorithm. The contribution of this research extends land partitioning and space partitioning in general, since these approaches may have relevance to other spatial processes that involve single or multi-objective problems that could be solved in the future by spatial evolutionary algorithms.
Experience with a Genetic Algorithm Implemented on a Multiprocessor Computer
NASA Technical Reports Server (NTRS)
Plassman, Gerald E.; Sobieszczanski-Sobieski, Jaroslaw
2000-01-01
Numerical experiments were conducted to find out the extent to which a Genetic Algorithm (GA) may benefit from a multiprocessor implementation, considering, on one hand, that analyses of individual designs in a population are independent of each other so that they may be executed concurrently on separate processors, and, on the other hand, that there are some operations in a GA that cannot be so distributed. The algorithm experimented with was based on a gaussian distribution rather than bit exchange in the GA reproductive mechanism, and the test case was a hub frame structure of up to 1080 design variables. The experimentation engaging up to 128 processors confirmed expectations of radical elapsed time reductions comparing to a conventional single processor implementation. It also demonstrated that the time spent in the non-distributable parts of the algorithm and the attendant cross-processor communication may have a very detrimental effect on the efficient utilization of the multiprocessor machine and on the number of processors that can be used effectively in a concurrent manner. Three techniques were devised and tested to mitigate that effect, resulting in efficiency increasing to exceed 99 percent.
Optimization of an antenna array using genetic algorithms
Kiehbadroudinezhad, Shahideh; Noordin, Nor Kamariah; Sali, A.; Abidin, Zamri Zainal
2014-06-01
An array of antennas is usually used in long distance communication. The observation of celestial objects necessitates a large array of antennas, such as the Giant Metrewave Radio Telescope (GMRT). Optimizing this kind of array is very important when observing a high performance system. The genetic algorithm (GA) is an optimization solution for these kinds of problems that reconfigures the position of antennas to increase the u-v coverage plane or decrease the sidelobe levels (SLLs). This paper presents how to optimize a correlator antenna array using the GA. A brief explanation about the GA and operators used in this paper (mutation and crossover) is provided. Then, the results of optimization are discussed. The results show that the GA provides efficient and optimum solutions among a pool of candidate solutions in order to achieve the desired array performance for the purposes of radio astronomy. The proposed algorithm is able to distribute the u-v plane more efficiently than GMRT with a more than 95% distribution ratio at snapshot, and to fill the u-v plane from a 20% to more than 68% filling ratio as the number of generations increases in the hour tracking observations. Finally, the algorithm is able to reduce the SLL to –21.75 dB.
Ancestral genome inference using a genetic algorithm approach.
Gao, Nan; Yang, Ning; Tang, Jijun
2013-01-01
Recent advancement of technologies has now made it routine to obtain and compare gene orders within genomes. Rearrangements of gene orders by operations such as reversal and transposition are rare events that enable researchers to reconstruct deep evolutionary histories. An important application of genome rearrangement analysis is to infer gene orders of ancestral genomes, which is valuable for identifying patterns of evolution and for modeling the evolutionary processes. Among various available methods, parsimony-based methods (including GRAPPA and MGR) are the most widely used. Since the core algorithms of these methods are solvers for the so called median problem, providing efficient and accurate median solver has attracted lots of attention in this field. The "double-cut-and-join" (DCJ) model uses the single DCJ operation to account for all genome rearrangement events. Because mathematically it is much simpler than handling events directly, parsimony methods using DCJ median solvers has better speed and accuracy. However, the DCJ median problem is NP-hard and although several exact algorithms are available, they all have great difficulties when given genomes are distant. In this paper, we present a new algorithm that combines genetic algorithm (GA) with genomic sorting to produce a new method which can solve the DCJ median problem in limited time and space, especially in large and distant datasets. Our experimental results show that this new GA-based method can find optimal or near optimal results for problems ranging from easy to very difficult. Compared to existing parsimony methods which may severely underestimate the true number of evolutionary events, the sorting-based approach can infer ancestral genomes which are much closer to their true ancestors. The code is available at http://phylo.cse.sc.edu. PMID:23658708
NASA Astrophysics Data System (ADS)
Huang, Xiaobiao; Safranek, James
2014-09-01
Nonlinear dynamics optimization is carried out for a low emittance upgrade lattice of SPEAR3 in order to improve its dynamic aperture and Touschek lifetime. Two multi-objective optimization algorithms, a genetic algorithm and a particle swarm algorithm, are used for this study. The performance of the two algorithms are compared. The result shows that the particle swarm algorithm converges significantly faster to similar or better solutions than the genetic algorithm and it does not require seeding of good solutions in the initial population. These advantages of the particle swarm algorithm may make it more suitable for many accelerator optimization applications.
Solving Integer Programming Problems by Using Artificial Bee Colony Algorithm
NASA Astrophysics Data System (ADS)
Akay, Bahriye; Karaboga, Dervis
This paper presents a study that applies the Artificial Bee Colony algorithm to integer programming problems and compares its performance with those of Particle Swarm Optimization algorithm variants and Branch and Bound technique presented to the literature. In order to cope with integer programming problems, in neighbour solution production unit, solutions are truncated to the nearest integer values. The experimental results show that Artificial Bee Colony algorithm can handle integer programming problems efficiently and Artificial Bee Colony algorithm can be considered to be very robust by the statistics calculated such as mean, median, standard deviation.
Algorithm and program for information processing with the filin apparatus
NASA Technical Reports Server (NTRS)
Gurin, L. S.; Morkrov, V. S.; Moskalenko, Y. I.; Tsoy, K. A.
1979-01-01
The reduction of spectral radiation data from space sources is described. The algorithm and program for identifying segments of information obtained from the Film telescope-spectrometer on the Salyut-4 are presented. The information segments represent suspected X-ray sources. The proposed algorithm is an algorithm of the lowest level. Following evaluation, information free of uninformative segments is subject to further processing with algorithms of a higher level. The language used is FORTRAN 4.
Bornholdt, S.; Graudenz, D.
1993-07-01
A learning algorithm based on genetic algorithms for asymmetric neural networks with an arbitrary structure is presented. It is suited for the learning of temporal patterns and leads to stable neural networks with feedback.
Evaluation of dynamic programming among the existing stereo matching algorithms
NASA Astrophysics Data System (ADS)
Huat, Teo Chee; Manap, Nurulfajar bin Abd
2015-05-01
There are various types of existing stereo matching algorithms on image processing which applied on stereo vision images to get better results of disparity depth map. One of them is the dynamic programming method. On this research is to perform an evaluation on the performance between the dynamic programming with other existing method as comparison. The algorithm used on the dynamic programming is the global optimization which provides better process on stereo images like its accuracy and its computational efficiency compared to other existing stereo matching algorithms. The dynamic programming algorithm used on this research is the current method as its disparity estimates at a particular pixel and all the other pixels unlike the old methods which with scanline based of dynamic programming. There will be details on every existing methods presented on this paper with the comparison between the dynamic programming and the existing methods. This can propose the dynamic programming method to be used on many applications in image processing.
Application of a genetic algorithm to wind turbine design
Selig, M.S.; Coverstone-Carroll, V.L.
1995-09-01
This paper presents an optimization procedure for stall-regulated horizontal-axis wind-turbines. A hybrid approach is used that combines the advantages of a genetic algorithm and an inverse design method. This method is used to determine the optimum blade pitch and blade chord and twist distributions that maximize the annual energy production. To illustrate the method, a family of 25 wind turbines was designed to examine the sensitivity of annual energy production to changes in the rotor blade length and peak rotor power. Trends are revealed that should aid in the design of new rotors for existing turbines. In the second application, a series of five wind turbines was designed to determine the benefits of specifically tailoring wind turbine blades for the average wind speed at a particular site. The results have important practical implications related to rotors designed for the Midwest versus those where the average wind speed may be greater.
An Intelligent Model for Pairs Trading Using Genetic Algorithms
Huang, Chien-Feng; Hsu, Chi-Jen; Chen, Chi-Chung; Chang, Bao Rong; Li, Chen-An
2015-01-01
Pairs trading is an important and challenging research area in computational finance, in which pairs of stocks are bought and sold in pair combinations for arbitrage opportunities. Traditional methods that solve this set of problems mostly rely on statistical methods such as regression. In contrast to the statistical approaches, recent advances in computational intelligence (CI) are leading to promising opportunities for solving problems in the financial applications more effectively. In this paper, we present a novel methodology for pairs trading using genetic algorithms (GA). Our results showed that the GA-based models are able to significantly outperform the benchmark and our proposed method is capable of generating robust models to tackle the dynamic characteristics in the financial application studied. Based upon the promising results obtained, we expect this GA-based method to advance the research in computational intelligence for finance and provide an effective solution to pairs trading for investment in practice. PMID:26339236
Improving ecological forecasts of copepod community dynamics using genetic algorithms
NASA Astrophysics Data System (ADS)
Record, N. R.; Pershing, A. J.; Runge, J. A.; Mayo, C. A.; Monger, B. C.; Chen, C.
2010-08-01
The validity of computational models is always in doubt. Skill assessment and validation are typically done by demonstrating that output is in agreement with empirical data. We test this approach by using a genetic algorithm to parameterize a biological-physical coupled copepod population dynamics computation. The model is applied to Cape Cod Bay, Massachusetts, and is designed for operational forecasting. By running twin experiments on terms in this dynamical system, we demonstrate that a good fit to data does not necessarily imply a valid parameterization. An ensemble of good fits, however, provides information on the accuracy of parameter values, on the functional importance of parameters, and on the ability to forecast accurately with an incorrect set of parameters. Additionally, we demonstrate that the technique is a useful tool for operational forecasting.
An adaptive genetic algorithm for crystal structure prediction
Wu, Shunqing; Ji, Min; Wang, Cai-Zhuang; Nguyen, Manh Cuong; Zhao, Xin; Umemoto, K.; Wentzcovitch, R. M.; Ho, Kai-Ming
2013-12-18
We present a genetic algorithm (GA) for structural search that combines the speed of structure exploration by classical potentials with the accuracy of density functional theory (DFT) calculations in an adaptive and iterative way. This strategy increases the efficiency of the DFT-based GA by several orders of magnitude. This gain allows a considerable increase in the size and complexity of systems that can be studied by first principles. The performance of the method is illustrated by successful structure identifications of complex binary and ternary intermetallic compounds with 36 and 54 atoms per cell, respectively. The discovery of a multi-TPa Mg-silicate phase with unit cell containing up to 56 atoms is also reported. Such a phase is likely to be an essential component of terrestrial exoplanetary mantles.
Merging of synchrotron serial crystallographic data by a genetic algorithm.
Zander, Ulrich; Cianci, Michele; Foos, Nicolas; Silva, Catarina S; Mazzei, Luca; Zubieta, Chloe; de Maria, Alejandro; Nanao, Max H
2016-09-01
Recent advances in macromolecular crystallography have made it practical to rapidly collect hundreds of sub-data sets consisting of small oscillations of incomplete data. This approach, generally referred to as serial crystallography, has many uses, including an increased effective dose per data set, the collection of data from crystals without harvesting (in situ data collection) and studies of dynamic events such as catalytic reactions. However, selecting which data sets from this type of experiment should be merged can be challenging and new methods are required. Here, it is shown that a genetic algorithm can be used for this purpose, and five case studies are presented in which the merging statistics are significantly improved compared with conventional merging of all data. PMID:27599735
Optimization of Power Coefficient of Wind Turbine Using Genetic Algorithm
NASA Astrophysics Data System (ADS)
Rajakumar, Sappani; Ravindran, Durairaj; Sivakumar, Mahalingam; Venkatachalam, Gopalan; Muthukumar, Shunmugavelu
2016-06-01
In the design of a wind turbine, the goal is to attain the highest possible power output under specified atmospheric conditions. The optimization of power coefficient of horizontal axis wind turbine has been carried out by integration of blade element momentum method and genetic algorithm (GA). The design variables considered are wind velocity, angle of attack and tip speed ratio. The objective function is power coefficient of wind turbine. The different combination of design variables are optimized using GA and then the Power coefficient is optimized. The optimized design variables are validated with the experimental results available in the literature. By this optimization work the optimum design variables of wind turbine can be found economically than experimental work. NACA44XX series airfoils are considered for this optimization work.
An Intelligent Model for Pairs Trading Using Genetic Algorithms.
Huang, Chien-Feng; Hsu, Chi-Jen; Chen, Chi-Chung; Chang, Bao Rong; Li, Chen-An
2015-01-01
Pairs trading is an important and challenging research area in computational finance, in which pairs of stocks are bought and sold in pair combinations for arbitrage opportunities. Traditional methods that solve this set of problems mostly rely on statistical methods such as regression. In contrast to the statistical approaches, recent advances in computational intelligence (CI) are leading to promising opportunities for solving problems in the financial applications more effectively. In this paper, we present a novel methodology for pairs trading using genetic algorithms (GA). Our results showed that the GA-based models are able to significantly outperform the benchmark and our proposed method is capable of generating robust models to tackle the dynamic characteristics in the financial application studied. Based upon the promising results obtained, we expect this GA-based method to advance the research in computational intelligence for finance and provide an effective solution to pairs trading for investment in practice. PMID:26339236
Alien Genetic Algorithm for Exploration of Search Space
NASA Astrophysics Data System (ADS)
Patel, Narendra; Padhiyar, Nitin
2010-10-01
Genetic Algorithm (GA) is a widely accepted population based stochastic optimization technique used for single and multi objective optimization problems. Various versions of modifications in GA have been proposed in last three decades mainly addressing two issues, namely increasing convergence rate and increasing probability of global minima. While both these. While addressing the first issue, GA tends to converge to a local optima and addressing the second issue corresponds the large computational efforts. Thus, to reduce the contradictory effects of these two aspects, we propose a modification in GA by adding an alien member in the population at every generation. Addition of an Alien member in the current population at every generation increases the probability of obtaining global minima at the same time maintaining higher convergence rate. With two test cases, we have demonstrated the efficacy of the proposed GA by comparing with the conventional GA.
Evolutionary Design of Rule Changing Artificial Society Using Genetic Algorithms
NASA Astrophysics Data System (ADS)
Wu, Yun; Kanoh, Hitoshi
Socioeconomic phenomena, cultural progress and political organization have recently been studied by creating artificial societies consisting of simulated agents. In this paper we propose a new method to design action rules of agents in artificial society that can realize given requests using genetic algorithms (GAs). In this paper we propose an efficient method for designing the action rules of agents that will constitute an artificial society that meets a specified demand by using a GAs. In the proposed method, each chromosome in the GA population represents a candidate set of action rules and the number of rule iterations. While a conventional method applies distinct rules in order of precedence, the present method applies a set of rules repeatedly for a certain period. The present method is aiming at both firm evolution of agent population and continuous action by that. Experimental results using the artificial society proved that the present method can generate artificial society which fills a demand in high probability.
Genetic Algorithms and Nucleation in VIH-AIDS transition.
NASA Astrophysics Data System (ADS)
Barranon, Armando
2003-03-01
VIH to AIDS transition has been modeled via a genetic algorithm that uses boom-boom principle and where population evolution is simulated with a cellular automaton based on SIR model. VIH to AIDS transition is signed by nucleation of infected cells and low probability of infection are obtained for different mutation rates in agreement with clinical results. A power law is obtained with a critical exponent close to the critical exponent of cubic, spherical percolation, colossal magnetic resonance, Ising Model and liquid-gas phase transition in heavy ion collisions. Computations were carried out at UAM-A Supercomputing Lab and author acknowledges financial support from Division of CBI at UAM-A.
Strawberry Maturity Neural Network Detectng System Based on Genetic Algorithm
NASA Astrophysics Data System (ADS)
Xu, Liming
The quick and non-detective detection of agriculture product is one of the measures to increase the precision and productivity of harvesting and grading. Having analyzed H frequency of different maturities in different light intensities, the results show that H frequency for the same maturity has little influence in different light intensities; Under the same light intensity, three strawberry maturities are changing in order. After having confirmed the H frequency section to distinguish the different strawberry maturity, the triplelayer feed-forward neural network system to detect strawberry maturity was designed by using genetic algorithm. The test results show that the detecting precision ratio is 91.7%, it takes 160ms to distinguish one strawberry. Therefore, the online non-detective detecting the strawberry maturity could be realized.
Tuning of active vibration controllers for ACTEX by genetic algorithm
NASA Astrophysics Data System (ADS)
Kwak, Moon K.; Denoyer, Keith K.
1999-06-01
This paper is concerned with the optimal tuning of digitally programmable analog controllers on the ACTEX-1 smart structures flight experiment. The programmable controllers for each channel include a third order Strain Rate Feedback (SRF) controller, a fifth order SRF controller, a second order Positive Position Feedback (PPF) controller, and a fourth order PPF controller. Optimal manual tuning of several control parameters can be a difficult task even though the closed-loop control characteristics of each controller are well known. Hence, the automatic tuning of individual control parameters using Genetic Algorithms is proposed in this paper. The optimal control parameters of each control law are obtained by imposing a constraint on the closed-loop frequency response functions using the ACTEX mathematical model. The tuned control parameters are then uploaded to the ACTEX electronic control electronics and experiments on the active vibration control are carried out in space. The experimental results on ACTEX will be presented.
Optimizing the controllability of arbitrary networks with genetic algorithm
NASA Astrophysics Data System (ADS)
Li, Xin-Feng; Lu, Zhe-Ming
2016-04-01
Recently, as the controllability of complex networks attracts much attention, how to optimize networks' controllability has become a common and urgent problem. In this paper, we develop an efficient genetic algorithm oriented optimization tool to optimize the controllability of arbitrary networks consisting of both state nodes and control nodes under Popov-Belevitch-Hautus rank condition. The experimental results on a number of benchmark networks show the effectiveness of this method and the evolution of network topology is captured. Furthermore, we explore how network structure affects its controllability and find that the sparser a network is, the more control nodes are needed to control it and the larger the differences between node degrees, the more control nodes are needed to achieve the full control. Our framework provides an alternative to controllability optimization and can be applied to arbitrary networks without any limitations.
Optimal Design of RF Energy Harvesting Device Using Genetic Algorithm
NASA Astrophysics Data System (ADS)
Mori, T.; Sato, Y.; Adriano, R.; Igarashi, H.
2015-11-01
This paper presents optimal design of an RF energy harvesting device using genetic algorithm (GA). In the present RF harvester, a planar spiral antenna (PSA) is loaded with matching and rectifying circuits. On the first stage of the optimal design, the shape parameters of PSA are optimized using . Then, the equivalent circuit of the optimized PSA is derived for optimization of the circuits. Finally, the parameters of RF energy harvesting circuit are optimized to maximize the output power using GA. It is shown that the present optimization increases the output power by a factor of five. The manufactured energy harvester starts working when the input electric field is greater than 0.5 V/m.
Genetic Algorithm Optimization of a Cost Competitive Hybrid Rocket Booster
NASA Technical Reports Server (NTRS)
Story, George
2014-01-01
Performance, reliability and cost have always been drivers in the rocket business. Hybrid rockets have been late entries into the launch business due to substantial early development work on liquid rockets and later on solid rockets. Slowly the technology readiness level of hybrids has been increasing due to various large scale testing and flight tests of hybrid rockets. A remaining issue is the cost of hybrids vs the existing launch propulsion systems. This paper will review the known state of the art hybrid development work to date and incorporate it into a genetic algorithm to optimize the configuration based on various parameters. A cost module will be incorporated to the code based on the weights of the components. The design will be optimized on meeting the performance requirements at the lowest cost.
Genetic Algorithm Optimization of a Cost Competitive Hybrid Rocket Booster
NASA Technical Reports Server (NTRS)
Story, George
2015-01-01
Performance, reliability and cost have always been drivers in the rocket business. Hybrid rockets have been late entries into the launch business due to substantial early development work on liquid rockets and solid rockets. Slowly the technology readiness level of hybrids has been increasing due to various large scale testing and flight tests of hybrid rockets. One remaining issue is the cost of hybrids versus the existing launch propulsion systems. This paper will review the known state-of-the-art hybrid development work to date and incorporate it into a genetic algorithm to optimize the configuration based on various parameters. A cost module will be incorporated to the code based on the weights of the components. The design will be optimized on meeting the performance requirements at the lowest cost.
A new perspective on dark energy modeling via genetic algorithms
Nesseris, Savvas; García-Bellido, Juan E-mail: juan.garciabellido@uam.es
2012-11-01
We use Genetic Algorithms to extract information from several cosmological probes, such as the type Ia supernovae (SnIa), the Baryon Acoustic Oscillations (BAO) and the growth rate of matter perturbations. This is done by implementing a model independent and bias-free reconstruction of the various scales and distances that characterize the data, like the luminosity d{sub L}(z) and the angular diameter distance d{sub A}(z) in the SnIa and BAO data, respectively, or the dependence with redshift of the matter density Ω{sub m}(a) in the growth rate data, fσ{sub 8}(z). These quantities can then be used to reconstruct the expansion history of the Universe, and the resulting Dark Energy (DE) equation of state w(z) in the context of FRW models, or the mass radial function Ω{sub M}(r) in LTB models. In this way, the reconstruction is completely independent of our prior bias. Furthermore, we use this method to test the Etherington relation, ie the well-known relation between the luminosity and the angular diameter distance, η≡d{sub L}(z)/(1+z){sup 2}d{sub A}(z), which is equal to 1 in metric theories of gravity. We find that the present data seem to suggest a 3-σ deviation from one at redshifts z ∼ 0.5. Finally, we present a novel way, within the Genetic Algorithm paradigm, to analytically estimate the errors on the reconstructed quantities by calculating a Path Integral over all possible functions that may contribute to the likelihood. We show that this can be done regardless of the data being correlated or uncorrelated with each other and we also explicitly demonstrate that our approach is in good agreement with other error estimation techniques like the Fisher Matrix approach and the Bootstrap Monte Carlo.
Modelling and genetic algorithm based optimisation of inverse supply chain
NASA Astrophysics Data System (ADS)
Bányai, T.
2009-04-01
(Recycling of household appliances with emphasis on reuse options). The purpose of this paper is the presentation of a possible method for avoiding the unnecessary environmental risk and landscape use through unprovoked large supply chain of collection systems of recycling processes. In the first part of the paper the author presents the mathematical model of recycling related collection systems (applied especially for wastes of electric and electronic products) and in the second part of the work a genetic algorithm based optimisation method will be demonstrated, by the aid of which it is possible to determine the optimal structure of the inverse supply chain from the point of view economical, ecological and logistic objective functions. The model of the inverse supply chain is based on a multi-level, hierarchical collection system. In case of this static model it is assumed that technical conditions are permanent. The total costs consist of three parts: total infrastructure costs, total material handling costs and environmental risk costs. The infrastructure-related costs are dependent only on the specific fixed costs and the specific unit costs of the operation points (collection, pre-treatment, treatment, recycling and reuse plants). The costs of warehousing and transportation are represented by the material handling related costs. The most important factors determining the level of environmental risk cost are the number of out of time recycled (treated or reused) products, the number of supply chain objects and the length of transportation routes. The objective function is the minimization of the total cost taking into consideration the constraints. However a lot of research work discussed the design of supply chain [8], but most of them concentrate on linear cost functions. In the case of this model non-linear cost functions were used. The non-linear cost functions and the possible high number of objects of the inverse supply chain leaded to the problem of choosing a
A test sheet generating algorithm based on intelligent genetic algorithm and hierarchical planning
NASA Astrophysics Data System (ADS)
Gu, Peipei; Niu, Zhendong; Chen, Xuting; Chen, Wei
2013-03-01
In recent years, computer-based testing has become an effective method to evaluate students' overall learning progress so that appropriate guiding strategies can be recommended. Research has been done to develop intelligent test assembling systems which can automatically generate test sheets based on given parameters of test items. A good multisubject test sheet depends on not only the quality of the test items but also the construction of the sheet. Effective and efficient construction of test sheets according to multiple subjects and criteria is a challenging problem. In this paper, a multi-subject test sheet generation problem is formulated and a test sheet generating approach based on intelligent genetic algorithm and hierarchical planning (GAHP) is proposed to tackle this problem. The proposed approach utilizes hierarchical planning to simplify the multi-subject testing problem and adopts genetic algorithm to process the layered criteria, enabling the construction of good test sheets according to multiple test item requirements. Experiments are conducted and the results show that the proposed approach is capable of effectively generating multi-subject test sheets that meet specified requirements and achieve good performance.
A test sheet generating algorithm based on intelligent genetic algorithm and hierarchical planning
NASA Astrophysics Data System (ADS)
Gu, Peipei; Niu, Zhendong; Chen, Xuting; Chen, Wei
2012-04-01
In recent years, computer-based testing has become an effective method to evaluate students' overall learning progress so that appropriate guiding strategies can be recommended. Research has been done to develop intelligent test assembling systems which can automatically generate test sheets based on given parameters of test items. A good multisubject test sheet depends on not only the quality of the test items but also the construction of the sheet. Effective and efficient construction of test sheets according to multiple subjects and criteria is a challenging problem. In this paper, a multi-subject test sheet generation problem is formulated and a test sheet generating approach based on intelligent genetic algorithm and hierarchical planning (GAHP) is proposed to tackle this problem. The proposed approach utilizes hierarchical planning to simplify the multi-subject testing problem and adopts genetic algorithm to process the layered criteria, enabling the construction of good test sheets according to multiple test item requirements. Experiments are conducted and the results show that the proposed approach is capable of effectively generating multi-subject test sheets that meet specified requirements and achieve good performance.
Use of genetic algorithm for the selection of EEG features
NASA Astrophysics Data System (ADS)
Asvestas, P.; Korda, A.; Kostopoulos, S.; Karanasiou, I.; Ouzounoglou, A.; Sidiropoulos, K.; Ventouras, E.; Matsopoulos, G.
2015-09-01
Genetic Algorithm (GA) is a popular optimization technique that can detect the global optimum of a multivariable function containing several local optima. GA has been widely used in the field of biomedical informatics, especially in the context of designing decision support systems that classify biomedical signals or images into classes of interest. The aim of this paper is to present a methodology, based on GA, for the selection of the optimal subset of features that can be used for the efficient classification of Event Related Potentials (ERPs), which are recorded during the observation of correct or incorrect actions. In our experiment, ERP recordings were acquired from sixteen (16) healthy volunteers who observed correct or incorrect actions of other subjects. The brain electrical activity was recorded at 47 locations on the scalp. The GA was formulated as a combinatorial optimizer for the selection of the combination of electrodes that maximizes the performance of the Fuzzy C Means (FCM) classification algorithm. In particular, during the evolution of the GA, for each candidate combination of electrodes, the well-known (Σ, Φ, Ω) features were calculated and were evaluated by means of the FCM method. The proposed methodology provided a combination of 8 electrodes, with classification accuracy 93.8%. Thus, GA can be the basis for the selection of features that discriminate ERP recordings of observations of correct or incorrect actions.
South American foF2 database using genetic algorithms
NASA Astrophysics Data System (ADS)
Gularte, Erika; Bilitza, Dieter; Carpintero, Daniel; Jaen, Juliana
2016-07-01
We present the first step towards a new database of the ionospheric parameter foF2 for the South American region. The foF2 parameter, being the maximum of the ionospheric electronic density profile and its main sculptor, is of great interest not only in atmospheric studies but also in the realm of radio propagation. Due to its importance, its large variability and the difficulty to model it in time and space, it was the subject of an intense study since decades ago. The current databases, used by the IRI (International Reference Ionosphere) model, and based on Fourier expansions, has been built in the 60s from the available ionosondes at that time; therefore, it is still short of South American data. The main goal of this work is to upgrade the database, incorporating the now available data compiled by the RAPEAS (Red Argentina para el Estudio de la Atmósfera Superior, Argentine Network for the Study of the Upper Atmosphere) network. Also, we developed an algorithm to study the foF2 variability, based on the modern technique of genetic algorithms, which has been successfully applied on other disciplines. One of the main advantages of this technique is its ability in working with many variables and with unfavorable samples. The results are compared with the IRI databases, and improvements to the latter are suggested. Finally, it is important to notice that the new database is designed so that new available data can be easily incorporated.
Human emotion detector based on genetic algorithm using lip features
NASA Astrophysics Data System (ADS)
Brown, Terrence; Fetanat, Gholamreza; Homaifar, Abdollah; Tsou, Brian; Mendoza-Schrock, Olga
2010-04-01
We predicted human emotion using a Genetic Algorithm (GA) based lip feature extractor from facial images to classify all seven universal emotions of fear, happiness, dislike, surprise, anger, sadness and neutrality. First, we isolated the mouth from the input images using special methods, such as Region of Interest (ROI) acquisition, grayscaling, histogram equalization, filtering, and edge detection. Next, the GA determined the optimal or near optimal ellipse parameters that circumvent and separate the mouth into upper and lower lips. The two ellipses then went through fitness calculation and were followed by training using a database of Japanese women's faces expressing all seven emotions. Finally, our proposed algorithm was tested using a published database consisting of emotions from several persons. The final results were then presented in confusion matrices. Our results showed an accuracy that varies from 20% to 60% for each of the seven emotions. The errors were mainly due to inaccuracies in the classification, and also due to the different expressions in the given emotion database. Detailed analysis of these errors pointed to the limitation of detecting emotion based on the lip features alone. Similar work [1] has been done in the literature for emotion detection in only one person, we have successfully extended our GA based solution to include several subjects.
Optimal Robust Motion Controller Design Using Multiobjective Genetic Algorithm
Svečko, Rajko
2014-01-01
This paper describes the use of a multiobjective genetic algorithm for robust motion controller design. Motion controller structure is based on a disturbance observer in an RIC framework. The RIC approach is presented in the form with internal and external feedback loops, in which an internal disturbance rejection controller and an external performance controller must be synthesised. This paper involves novel objectives for robustness and performance assessments for such an approach. Objective functions for the robustness property of RIC are based on simple even polynomials with nonnegativity conditions. Regional pole placement method is presented with the aims of controllers' structures simplification and their additional arbitrary selection. Regional pole placement involves arbitrary selection of central polynomials for both loops, with additional admissible region of the optimized pole location. Polynomial deviation between selected and optimized polynomials is measured with derived performance objective functions. A multiobjective function is composed of different unrelated criteria such as robust stability, controllers' stability, and time-performance indexes of closed loops. The design of controllers and multiobjective optimization procedure involve a set of the objectives, which are optimized simultaneously with a genetic algorithm—differential evolution. PMID:24987749
Genetic algorithm parameter optimization: applied to sensor coverage
NASA Astrophysics Data System (ADS)
Sahin, Ferat; Abbate, Giuseppe
2004-08-01
Genetic Algorithms are powerful tools, which when set upon a solution space will search for the optimal answer. These algorithms though have some associated problems, which are inherent to the method such as pre-mature convergence and lack of population diversity. These problems can be controlled with changes to certain parameters such as crossover, selection, and mutation. This paper attempts to tackle these problems in GA by having another GA controlling these parameters. The values for crossover parameter are: one point, two point, and uniform. The values for selection parameters are: best, worst, roulette wheel, inside 50%, outside 50%. The values for the mutation parameter are: random and swap. The system will include a control GA whose population will consist of different parameters settings. While this GA is attempting to find the best parameters it will be advancing into the search space of the problem and refining the population. As the population changes due to the search so will the optimal parameters. For every control GA generation each of the individuals in the population will be tested for fitness by being run through the problem GA with the assigned parameters. During these runs the population used in the next control generation is compiled. Thus, both the issue of finding the best parameters and the solution to the problem are attacked at the same time. The goal is to optimize the sensor coverage in a square field. The test case used was a 30 by 30 unit field with 100 sensor nodes. Each sensor node had a coverage area of 3 by 3 units. The algorithm attempts to optimize the sensor coverage in the field by moving the nodes. The results show that the control GA will provide better results when compared to a system with no parameter changes.
Genetic programming approach to extracting features from remotely sensed imagery
Theiler, J. P.; Perkins, S. J.; Harvey, N. R.; Szymanski, J. J.; Brumby, Steven P.
2001-01-01
Multi-instrument data sets present an interesting challenge to feature extraction algorithm developers. Beyond the immediate problems of spatial co-registration, the remote sensing scientist must explore a complex algorithm space in which both spatial and spectral signatures may be required to identify a feature of interest. We describe a genetic programming/supervised classifier software system, called Genie, which evolves and combines spatio-spectral image processing tools for remotely sensed imagery. We describe our representation of candidate image processing pipelines, and discuss our set of primitive image operators. Our primary application has been in the field of geospatial feature extraction, including wildfire scars and general land-cover classes, using publicly available multi-spectral imagery (MSI) and hyper-spectral imagery (HSI). Here, we demonstrate our system on Landsat 7 Enhanced Thematic Mapper (ETM+) MSI. We exhibit an evolved pipeline, and discuss its operation and performance.
A genetic algorithmic approach to antenna null-steering using a cluster computer.
NASA Astrophysics Data System (ADS)
Recine, Greg; Cui, Hong-Liang
2001-06-01
We apply a genetic algorithm (GA) to the problem of electronically steering the maximums and nulls of an antenna array to desired positions (null toward enemy listener/jammer, max toward friendly listener/transmitter). The antenna pattern itself is computed using NEC2 which is called by the main GA program. Since a GA naturally lends itself to parallelization, this simulation was applied to our new twin 64-node cluster computers (Gemini). Design issues and uses of the Gemini cluster in our group are also discussed.
NASA Astrophysics Data System (ADS)
Xu, Dexiang
This dissertation presents a novel method of designing finite word length Finite Impulse Response (FIR) digital filters using a Real Parameter Parallel Genetic Algorithm (RPPGA). This algorithm is derived from basic Genetic Algorithms which are inspired by natural genetics principles. Both experimental results and theoretical studies in this work reveal that the RPPGA is a suitable method for determining the optimal or near optimal discrete coefficients of finite word length FIR digital filters. Performance of RPPGA is evaluated by comparing specifications of filters designed by other methods with filters designed by RPPGA. The parallel and spatial structures of the algorithm result in faster and more robust optimization than basic genetic algorithms. A filter designed by RPPGA is implemented in hardware to attenuate high frequency noise in a data acquisition system for collecting seismic signals. These studies may lead to more applications of the Real Parameter Parallel Genetic Algorithms in Electrical Engineering.
Orbit design and estimation for surveillance missions using genetic algorithms
NASA Astrophysics Data System (ADS)
Abdelkhalik, Osama Mohamed Omar
2005-11-01
The problem of observing a given set of Earth target sites within an assigned time frame is examined. Attention is given mainly to visiting these sites as sub-satellite nadir points. Solutions to this problem in the literature require thrusters to continuously maneuver the satellite from one site to another. A natural solution is proposed. A natural solution is a gravitational orbit that enables the spacecraft to satisfy the mission requirements without maneuvering. Optimization of a penalty function is performed to find natural solutions for satellite orbit configurations. This penalty function depends on the mission objectives. Two mission objectives are considered: maximum observation time and maximum resolution. The penalty function poses multi minima and a genetic algorithm technique is used to solve this problem. In the case that there is no one orbit satisfying the mission requirements, a multi-orbit solution is proposed. In a multi-orbit solution, the set of target sites is split into two groups. Then the developed algorithm is used to search for a natural solution for each group. The satellite has to be maneuvered between the two solution orbits. Genetic algorithms are used to find the optimal orbit transfer between the two orbits using impulsive thrusters. A new formulation for solving the orbit maneuver problem using genetic algorithms is developed. The developed formulation searches for a minimum fuel consumption maneuver and guarantees that the satellite will be transferred exactly to the final orbit even if the solution is non-optimal. The results obtained demonstrate the feasibility of finding natural solutions for many case studies. The problem of the design of suitable satellite constellation for Earth observing applications is addressed. Two cases are considered. The first is the remote sensing missions for a particular region with high frequency and small swath width. The second is the interferometry radar Earth observation missions. In satellite
Synthesizing Dynamic Programming Algorithms from Linear Temporal Logic Formulae
NASA Technical Reports Server (NTRS)
Rosu, Grigore; Havelund, Klaus
2001-01-01
The problem of testing a linear temporal logic (LTL) formula on a finite execution trace of events, generated by an executing program, occurs naturally in runtime analysis of software. We present an algorithm which takes an LTL formula and generates an efficient dynamic programming algorithm. The generated algorithm tests whether the LTL formula is satisfied by a finite trace of events given as input. The generated algorithm runs in linear time, its constant depending on the size of the LTL formula. The memory needed is constant, also depending on the size of the formula.
NASA Astrophysics Data System (ADS)
Biswas, S.; Goswami, S. K.
2010-10-01
In the present paper an attempt has been made to place the distributed generation at an optimal location so as to improve the technical as well as economical performance. Among technical issues the sag performance and the loss have been considered. Genetic algorithm method has been used as the optimization technique in this problem. For sag analysis the impact of 3-phase symmetrical short circuit faults is considered. Total load disturbed during the faults is considered as an indicator of sag performance. The solution algorithm is demonstrated on a 34 bus radial distribution system with some lateral branches. For simplicity only one DG of predefined capacity is considered. MATLAB has been used as the programming environment.
Genetic algorithms for adaptive real-time control in space systems
NASA Technical Reports Server (NTRS)
Vanderzijp, J.; Choudry, A.
1988-01-01
Genetic Algorithms that are used for learning as one way to control the combinational explosion associated with the generation of new rules are discussed. The Genetic Algorithm approach tends to work best when it can be applied to a domain independent knowledge representation. Applications to real time control in space systems are discussed.
User-Based Document Clustering by Redescribing Subject Descriptions with a Genetic Algorithm.
ERIC Educational Resources Information Center
Gordon, Michael D.
1991-01-01
Discussion of clustering of documents and queries in information retrieval systems focuses on the use of a genetic algorithm to adapt subject descriptions so that documents become more effective in matching relevant queries. Various types of clustering are explained, and simulation experiments used to test the genetic algorithm are described. (27…
Order-Based Fitness Functions for Genetic Algorithms Applied to Relevance Feedback.
ERIC Educational Resources Information Center
Lopez-Pujalte, Cristina; Guerrero-Bote, Vicente P.; de Moya-Anegon, Felix
2003-01-01
Discusses genetic algorithms in information retrieval, especially for relevance feedback, and evaluates the efficacy of a genetic algorithm with various order-based fitness functions for relevance feedback in a test database. Compares results with the Ide dec-hi method, one of the best traditional methods. (Contains 56 references.) (Author/LRW)
Using genetic algorithms to select and create features for pattern classification. Technical report
Chang, E.I.; Lippmann, R.P.
1991-03-11
Genetic algorithms were used to select and create features and to select reference exemplar patterns for machine vision and speech pattern classification tasks. On a 15-feature machine-vision inspection task, it was found that genetic algorithms performed no better than conventional approaches to feature selection but required much more computation. For a speech recognition task, genetic algorithms required no more computation time than traditional approaches but reduced the number of features required by a factor of five (from 153 to 33 features). On a difficult artificial machine-vision task, genetic algorithms were able to create new features (polynomial functions of the original features) that reduced classification error rates from 10 to almost 0 percent. Neural net and nearest-neighbor classifiers were unable to provide such low error rates using only the original features. Genetic algorithms were also used to reduce the number of reference exemplar patterns and to select the value of k for a k-nearest-neighbor classifier. On a .338 training pattern vowel recognition problem with 10 classes, genetic algorithms simultaneously reduced the number of stored exemplars from 338 to 63 and selected k without significantly decreasing classification accuracy. In all applications, genetic algorithms were easy to apply and found good solutions in many fewer trials than would be required by an exhaustive search. Run times were long but not unreasonable. These results suggest that genetic algorithms may soon be practical for pattern classification problems as faster serial and parallel computers are developed.
On a programming language for graph algorithms
NASA Technical Reports Server (NTRS)
Rheinboldt, W. C.; Basili, V. R.; Mesztenyi, C. K.
1971-01-01
An algorithmic language, GRAAL, is presented for describing and implementing graph algorithms of the type primarily arising in applications. The language is based on a set algebraic model of graph theory which defines the graph structure in terms of morphisms between certain set algebraic structures over the node set and arc set. GRAAL is modular in the sense that the user specifies which of these mappings are available with any graph. This allows flexibility in the selection of the storage representation for different graph structures. In line with its set theoretic foundation, the language introduces sets as a basic data type and provides for the efficient execution of all set and graph operators. At present, GRAAL is defined as an extension of ALGOL 60 (revised) and its formal description is given as a supplement to the syntactic and semantic definition of ALGOL. Several typical graph algorithms are written in GRAAL to illustrate various features of the language and to show its applicability.
Genetic algorithms applied to nonlinear and complex domains
Barash, D; Woodin, A E
1999-06-01
The dissertation, titled ''Genetic Algorithms Applied to Nonlinear and Complex Domains'', describes and then applies a new class of powerful search algorithms (GAS) to certain domains. GAS are capable of solving complex and nonlinear problems where many parameters interact to produce a ''final'' result such as the optimization of the laser pulse in the interaction of an atom with an intense laser field. GAS can very efficiently locate the global maximum by searching parameter space in problems which are unsuitable for a search using traditional methods. In particular, the dissertation contains new scientific findings in two areas. First, the dissertation examines the interaction of an ultra-intense short laser pulse with atoms. GAS are used to find the optimal frequency for stabilizing atoms in the ionization process. This leads to a new theoretical formulation, to explain what is happening during the ionization process and how the electron is responding to finite (real-life) laser pulse shapes. It is shown that the dynamics of the process can be very sensitive to the ramp of the pulse at high frequencies. The new theory which is formulated, also uses a novel concept (known as the (t,t') method) to numerically solve the time-dependent Schrodinger equation Second, the dissertation also examines the use of GAS in modeling decision making problems. It compares GAS with traditional techniques to solve a class of problems known as Markov Decision Processes. The conclusion of the dissertation should give a clear idea of where GAS are applicable, especially in the physical sciences, in problems which are nonlinear and complex, i.e. difficult to analyze by other means.
Genetic algorithms applied to nonlinear and complex domains
Barash, D; Woodin, A E
1999-06-01
The dissertation, titled ''Genetic Algorithms Applied to Nonlinear and Complex Domains'', describes and then applies a new class of powerful search algorithms (GAS) to certain domains. GAS are capable of solving complex and nonlinear problems where many parameters interact to produce a final result such as the optimization of the laser pulse in the interaction of an atom with an intense laser field. GAS can very efficiently locate the global maximum by searching parameter space in problems which are unsuitable for a search using traditional methods. In particular, the dissertation contains new scientific findings in two areas. First, the dissertation examines the interaction of an ultra-intense short laser pulse with atoms. GAS are used to find the optimal frequency for stabilizing atoms in the ionization process. This leads to a new theoretical formulation, to explain what is happening during the ionization process and how the electron is responding to finite (real-life) laser pulse shapes. It is shown that the dynamics of the process can be very sensitive to the ramp of the pulse at high frequencies. The new theory which is formulated, also uses a novel concept (known as the (t,t') method) to numerically solve the time-dependent Schrodinger equation Second, the dissertation also examines the use of GAS in modeling decision making problems. It compares GAS with traditional techniques to solve a class of problems known as Markov Decision Processes. The conclusion of the dissertation should give a clear idea of where GAS are applicable, especially in the physical sciences, in problems which are nonlinear and complex, i.e. difficult to analyze by other means.
Modelling and genetic algorithm based optimisation of inverse supply chain
NASA Astrophysics Data System (ADS)
Bányai, T.
2009-04-01
(Recycling of household appliances with emphasis on reuse options). The purpose of this paper is the presentation of a possible method for avoiding the unnecessary environmental risk and landscape use through unprovoked large supply chain of collection systems of recycling processes. In the first part of the paper the author presents the mathematical model of recycling related collection systems (applied especially for wastes of electric and electronic products) and in the second part of the work a genetic algorithm based optimisation method will be demonstrated, by the aid of which it is possible to determine the optimal structure of the inverse supply chain from the point of view economical, ecological and logistic objective functions. The model of the inverse supply chain is based on a multi-level, hierarchical collection system. In case of this static model it is assumed that technical conditions are permanent. The total costs consist of three parts: total infrastructure costs, total material handling costs and environmental risk costs. The infrastructure-related costs are dependent only on the specific fixed costs and the specific unit costs of the operation points (collection, pre-treatment, treatment, recycling and reuse plants). The costs of warehousing and transportation are represented by the material handling related costs. The most important factors determining the level of environmental risk cost are the number of out of time recycled (treated or reused) products, the number of supply chain objects and the length of transportation routes. The objective function is the minimization of the total cost taking into consideration the constraints. However a lot of research work discussed the design of supply chain [8], but most of them concentrate on linear cost functions. In the case of this model non-linear cost functions were used. The non-linear cost functions and the possible high number of objects of the inverse supply chain leaded to the problem of choosing a
SPLICER - A GENETIC ALGORITHM TOOL FOR SEARCH AND OPTIMIZATION, VERSION 1.0 (MACINTOSH VERSION)
NASA Technical Reports Server (NTRS)
Wang, L.
1994-01-01
SPLICER is a genetic algorithm tool which can be used to solve search and optimization problems. Genetic algorithms are adaptive search procedures (i.e. problem solving methods) based loosely on the processes of natural selection and Darwinian "survival of the fittest." SPLICER provides the underlying framework and structure for building a genetic algorithm application. These algorithms apply genetically-inspired operators to populations of potential solutions in an iterative fashion, creating new populations while searching for an optimal or near-optimal solution to the problem at hand. SPLICER 1.0 was created using a modular architecture that includes a Genetic Algorithm Kernel, interchangeable Representation Libraries, Fitness Modules and User Interface Libraries, and well-defined interfaces between these components. The architecture supports portability, flexibility, and extensibility. SPLICER comes with all source code and several examples. For instance, a "traveling salesperson" example searches for the minimum distance through a number of cities visiting each city only once. Stand-alone SPLICER applications can be used without any programming knowledge. However, to fully utilize SPLICER within new problem domains, familiarity with C language programming is essential. SPLICER's genetic algorithm (GA) kernel was developed independent of representation (i.e. problem encoding), fitness function or user interface type. The GA kernel comprises all functions necessary for the manipulation of populations. These functions include the creation of populations and population members, the iterative population model, fitness scaling, parent selection and sampling, and the generation of population statistics. In addition, miscellaneous functions are included in the kernel (e.g., random number generators). Different problem-encoding schemes and functions are defined and stored in interchangeable representation libraries. This allows the GA kernel to be used with any
A dynamic programming algorithm for RNA structure prediction including pseudoknots.
Rivas, E; Eddy, S R
1999-02-01
We describe a dynamic programming algorithm for predicting optimal RNA secondary structure, including pseudoknots. The algorithm has a worst case complexity of O(N6) in time and O(N4) in storage. The description of the algorithm is complex, which led us to adopt a useful graphical representation (Feynman diagrams) borrowed from quantum field theory. We present an implementation of the algorithm that generates the optimal minimum energy structure for a single RNA sequence, using standard RNA folding thermodynamic parameters augmented by a few parameters describing the thermodynamic stability of pseudoknots. We demonstrate the properties of the algorithm by using it to predict structures for several small pseudoknotted and non-pseudoknotted RNAs. Although the time and memory demands of the algorithm are steep, we believe this is the first algorithm to be able to fold optimal (minimum energy) pseudoknotted RNAs with the accepted RNA thermodynamic model. PMID:9925784
A modified genetic algorithm with fuzzy roulette wheel selection for job-shop scheduling problems
NASA Astrophysics Data System (ADS)
Thammano, Arit; Teekeng, Wannaporn
2015-05-01
The job-shop scheduling problem is one of the most difficult production planning problems. Since it is in the NP-hard class, a recent trend in solving the job-shop scheduling problem is shifting towards the use of heuristic and metaheuristic algorithms. This paper proposes a novel metaheuristic algorithm, which is a modification of the genetic algorithm. This proposed algorithm introduces two new concepts to the standard genetic algorithm: (1) fuzzy roulette wheel selection and (2) the mutation operation with tabu list. The proposed algorithm has been evaluated and compared with several state-of-the-art algorithms in the literature. The experimental results on 53 JSSPs show that the proposed algorithm is very effective in solving the combinatorial optimization problems. It outperforms all state-of-the-art algorithms on all benchmark problems in terms of the ability to achieve the optimal solution and the computational time.
RSA cipher algorithm improvements and VC programming realization
NASA Astrophysics Data System (ADS)
Wei, Xianmin
2011-10-01
This paper discusses the RSA algorithm basic mathematical principle, on the basis to propose a faster design improvement. Programming with Visual C proved that the operation speed of improved RSA algorithm is greatly faster than the speed without improvement. However, the security of anti-crack ability has not been adversely affected.
Duplication of coding segments in genetic programming
Haynes, T.
1996-12-31
Research into the utility of non-coding segments, or introns, in genetic-based encodings has shown that they expedite the evolution of solutions in domains by protecting building blocks against destructive crossover. We consider a genetic programming system where non-coding segments can be removed, and the resultant chromosomes returned into the population. This parsimonious repair leads to premature convergence, since as we remove the naturally occurring non-coding segments, we strip away their protective backup feature. We then duplicate the coding segments in the repaired chromosomes, and place the modified chromosomes into the population. The duplication method significantly improves the learning rate in the domain we have considered. We also show that this method can be applied to other domains.
Genetic algorithms approach for the extraction of the polygonal approximation of planar objects
NASA Astrophysics Data System (ADS)
Erives, Hector; Parra-Loera, Ramon
1996-06-01
A new approach to the extraction of the polygonal approximation is presented. The method obtains a smaller set of the important features by means of an evolutionary algorithm. A genetic approach with some heuristics, improves contour approximation search by starting with a parallel search at various points in the contour. The algorithm uses genetic algorithms to encode a polygonal approximation as a chromosome and evolve it to provide a polygonal approximation. Experimental results are provided.
Aerodynamic Shape Optimization Using A Real-Number-Encoded Genetic Algorithm
NASA Technical Reports Server (NTRS)
Holst, Terry L.; Pulliam, Thomas H.
2001-01-01
A new method for aerodynamic shape optimization using a genetic algorithm with real number encoding is presented. The algorithm is used to optimize three different problems, a simple hill climbing problem, a quasi-one-dimensional nozzle problem using an Euler equation solver and a three-dimensional transonic wing problem using a nonlinear potential solver. Results indicate that the genetic algorithm is easy to implement and extremely reliable, being relatively insensitive to design space noise.
NASA Astrophysics Data System (ADS)
Zhang, Aizhu; Sun, Genyun; Wang, Zhenjie
2015-12-01
The serious information redundancy in hyperspectral images (HIs) cannot contribute to the data analysis accuracy, instead it require expensive computational resources. Consequently, to identify the most useful and valuable information from the HIs, thereby improve the accuracy of data analysis, this paper proposed a novel hyperspectral band selection method using the hybrid genetic algorithm and gravitational search algorithm (GA-GSA). In the proposed method, the GA-GSA is mapped to the binary space at first. Then, the accuracy of the support vector machine (SVM) classifier and the number of selected spectral bands are utilized to measure the discriminative capability of the band subset. Finally, the band subset with the smallest number of spectral bands as well as covers the most useful and valuable information is obtained. To verify the effectiveness of the proposed method, studies conducted on an AVIRIS image against two recently proposed state-of-the-art GSA variants are presented. The experimental results revealed the superiority of the proposed method and indicated that the method can indeed considerably reduce data storage costs and efficiently identify the band subset with stable and high classification precision.
User Profile Creation Using Genetic Algorithm with Kullback Leibler Divergence
NASA Astrophysics Data System (ADS)
Hidekazu, Yanagimoto; Sigeru, Omatu
In this paper we propose a user profile creation method using the Kullback Leibler divergence. To cope with information flood, many information filtering systems have been developed up to now. In the information filtering systems it is important to create a user profile which represents user's interests correctly. Since almost all information filtering systems are developed with techniques of information retrieval, machine learning, and pattern recognition, they often use a linear function as a discriminant function. To classify information in the field of document classification more precisely, the systems have been reported which use a non-linear function as a discriminant function. The proposed method is to use the Kullback Leibler divergence as a discriminant function which denotes to user's interest in the information filtering system. To identify an optimal discriminat function with documents which a user evaluates, we use the real-coded genetic algorithm. We compare the present method with the other one using a linear discriminant function and confirm the effectiveness of the proposing method.
Genetic algorithm optimized triply compensated pulses in NMR spectroscopy
NASA Astrophysics Data System (ADS)
Manu, V. S.; Veglia, Gianluigi
2015-11-01
Sensitivity and resolution in NMR experiments are affected by magnetic field inhomogeneities (of both external and RF), errors in pulse calibration, and offset effects due to finite length of RF pulses. To remedy these problems, built-in compensation mechanisms for these experimental imperfections are often necessary. Here, we propose a new family of phase-modulated constant-amplitude broadband pulses with high compensation for RF inhomogeneity and heteronuclear coupling evolution. These pulses were optimized using a genetic algorithm (GA), which consists in a global optimization method inspired by Nature's evolutionary processes. The newly designed π and π / 2 pulses belong to the 'type A' (or general rotors) symmetric composite pulses. These GA-optimized pulses are relatively short compared to other general rotors and can be used for excitation and inversion, as well as refocusing pulses in spin-echo experiments. The performance of the GA-optimized pulses was assessed in Magic Angle Spinning (MAS) solid-state NMR experiments using a crystalline U-13C, 15N NAVL peptide as well as U-13C, 15N microcrystalline ubiquitin. GA optimization of NMR pulse sequences opens a window for improving current experiments and designing new robust pulse sequences.
Robust Sparse Matching and Motion Estimation Using Genetic Algorithms
NASA Astrophysics Data System (ADS)
Shahbazi, M.; Sohn, G.; Théau, J.; Ménard, P.
2015-03-01
In this paper, we propose a robust technique using genetic algorithm for detecting inliers and estimating accurate motion parameters from putative correspondences containing any percentage of outliers. The proposed technique aims to increase computational efficiency and modelling accuracy in comparison with the state-of-the-art via the following contributions: i) guided generation of initial populations for both avoiding degenerate solutions and increasing the rate of useful hypotheses, ii) replacing random search with evolutionary search, iii) possibility of evaluating the individuals of every population by parallel computation, iv) being performable on images with unknown internal orientation parameters, iv) estimating the motion model via detecting a minimum, however more than enough, set of inliers, v) ensuring the robustness of the motion model against outliers, degeneracy and poorperspective camera models, vi) making no assumptions about the probability distribution of inliers and/or outliers residuals from the estimated motion model, vii) detecting all the inliers by setting the threshold on their residuals adaptively with regard to the uncertainty of the estimated motion model and the position of the matches. The proposed method was evaluated both on synthetic data and real images. The results were compared with the most popular techniques from the state-of-the-art, including RANSAC, MSAC, MLESAC, Least Trimmed Squares and Least Median of Squares. Experimental results proved that the proposed approach perform better than others in terms of accuracy of motion estimation, accuracy of inlier detection and the computational efficiency.
Reducing aerodynamic vibration with piezoelectric actuators: a genetic algorithm optimization
NASA Astrophysics Data System (ADS)
Hu, Zhenning; Jakiela, Mark; Pitt, Dale M.; Burnham, Jay K.
2004-07-01
Modern high performance aircraft fly at high speeds and high angles of attack. This can result in "buffet" aerodynamics, an unsteady turbulent flow that causes vibrations of the wings, tails, and body of the aircraft. This can result in decreased performance and ride quality, and fatigue failures. We are experimenting with controlling these vibrations by using piezoceramic actuators attached to the inner and outer skin of the aircraft. In this project, a tail or wing is investigated. A "generic" tail finite element model is studied in which individual actuators are assumed to exactly cover individual finite elements. Various optimizations of the orientations and power consumed by these actuators are then performed. Real coded genetic algorithms are used to perform the optimizations and a design space approximation technique is used to minimize costly finite element runs. An important result is the identification of a power consumption threshold for the entire system. Below the threshold, vibration control performance of optimized systems decreases with decreasing values of power supplied to the entire system.
Constrained genetic algorithms for optimizing multi-use reservoir operation
NASA Astrophysics Data System (ADS)
Chang, Li-Chiu; Chang, Fi-John; Wang, Kuo-Wei; Dai, Shin-Yi
2010-08-01
To derive an optimal strategy for reservoir operations to assist the decision-making process, we propose a methodology that incorporates the constrained genetic algorithm (CGA) where the ecological base flow requirements are considered as constraints to water release of reservoir operation when optimizing the 10-day reservoir storage. Furthermore, a number of penalty functions designed for different types of constraints are integrated into reservoir operational objectives to form the fitness function. To validate the applicability of this proposed methodology for reservoir operations, the Shih-Men Reservoir and its downstream water demands are used as a case study. By implementing the proposed CGA in optimizing the operational performance of the Shih-Men Reservoir for the last 20 years, we find this method provides much better performance in terms of a small generalized shortage index (GSI) for human water demands and greater ecological base flows for most of the years than historical operations do. We demonstrate the CGA approach can significantly improve the efficiency and effectiveness of water supply capability to both human and ecological base flow requirements and thus optimize reservoir operations for multiple water users. The CGA can be a powerful tool in searching for the optimal strategy for multi-use reservoir operations in water resources management.
Sequence-Specific Copolymer Compatibilizers designed via a Genetic Algorithm
NASA Astrophysics Data System (ADS)
Meenakshisundaram, Venkatesh; Patra, Tarak; Hung, Jui-Hsiang; Simmons, David
For several decades, block copolymers have been employed as surfactants to reduce interfacial energy for applications from emulsification to surface adhesion. While the simplest approach employs symmetric diblocks, studies have examined asymmetric diblocks, multiblock copolymers, gradient copolymers, and copolymer-grafted nanoparticles. However, there exists no established approach to determining the optimal copolymer compatibilizer sequence for a given application. Here we employ molecular dynamics simulations within a genetic algorithm to identify copolymer surfactant sequences yielding maximum reductions the interfacial energy of model immiscible polymers. The optimal copolymer sequence depends significantly on surfactant concentration. Most surprisingly, at high surface concentrations, where the surfactant achieves the greatest interfacial energy reduction, specific non-periodic sequences are found to significantly outperform any regularly blocky sequence. This emergence of polymer sequence-specificity within a non-sequenced environment adds to a recent body of work suggesting that specific sequence may have the potential to play a greater role in polymer properties than previously understood. We acknowledge the W. M. Keck Foundation for financial support of this research.
A Moving Target Environment for Computer Configurations Using Genetic Algorithms
Crouse, Michael; Fulp, Errin W.
2011-10-31
Moving Target (MT) environments for computer systems provide security through diversity by changing various system properties that are explicitly defined in the computer configuration. Temporal diversity can be achieved by making periodic configuration changes; however in an infrastructure of multiple similarly purposed computers diversity must also be spatial, ensuring multiple computers do not simultaneously share the same configuration and potential vulnerabilities. Given the number of possible changes and their potential interdependencies discovering computer configurations that are secure, functional, and diverse is challenging. This paper describes how a Genetic Algorithm (GA) can be employed to find temporally and spatially diverse secure computer configurations. In the proposed approach a computer configuration is modeled as a chromosome, where an individual configuration setting is a trait or allele. The GA operates by combining multiple chromosomes (configurations) which are tested for feasibility and ranked based on performance which will be measured as resistance to attack. The result of successive iterations of the GA are secure configurations that are diverse due to the crossover and mutation processes. Simulations results will demonstrate this approach can provide at MT environment for a large infrastructure of similarly purposed computers by discovering temporally and spatially diverse secure configurations.
Toward Developing Genetic Algorithms to Aid in Critical Infrastructure Modeling
Not Available
2007-05-01
Today’s society relies upon an array of complex national and international infrastructure networks such as transportation, telecommunication, financial and energy. Understanding these interdependencies is necessary in order to protect our critical infrastructure. The Critical Infrastructure Modeling System, CIMS©, examines the interrelationships between infrastructure networks. CIMS© development is sponsored by the National Security Division at the Idaho National Laboratory (INL) in its ongoing mission for providing critical infrastructure protection and preparedness. A genetic algorithm (GA) is an optimization technique based on Darwin’s theory of evolution. A GA can be coupled with CIMS© to search for optimum ways to protect infrastructure assets. This includes identifying optimum assets to enforce or protect, testing the addition of or change to infrastructure before implementation, or finding the optimum response to an emergency for response planning. This paper describes the addition of a GA to infrastructure modeling for infrastructure planning. It first introduces the CIMS© infrastructure modeling software used as the modeling engine to support the GA. Next, the GA techniques and parameters are defined. Then a test scenario illustrates the integration with CIMS© and the preliminary results.
Shape: automatic conformation prediction of carbohydrates using a genetic algorithm
2009-01-01
Background Detailed experimental three dimensional structures of carbohydrates are often difficult to acquire. Molecular modelling and computational conformation prediction are therefore commonly used tools for three dimensional structure studies. Modelling procedures generally require significant training and computing resources, which is often impractical for most experimental chemists and biologists. Shape has been developed to improve the availability of modelling in this field. Results The Shape software package has been developed for simplicity of use and conformation prediction performance. A trivial user interface coupled to an efficient genetic algorithm conformation search makes it a powerful tool for automated modelling. Carbohydrates up to a few hundred atoms in size can be investigated on common computer hardware. It has been shown to perform well for the prediction of over four hundred bioactive oligosaccharides, as well as compare favourably with previously published studies on carbohydrate conformation prediction. Conclusion The Shape fully automated conformation prediction can be used by scientists who lack significant modelling training, and performs well on computing hardware such as laptops and desktops. It can also be deployed on computer clusters for increased capacity. The prediction accuracy under the default settings is good, as it agrees well with experimental data and previously published conformation prediction studies. This software is available both as open source and under commercial licenses. PMID:20298520
Inner Random Restart Genetic Algorithm for Practical Delivery Schedule Optimization
NASA Astrophysics Data System (ADS)
Sakurai, Yoshitaka; Takada, Kouhei; Onoyama, Takashi; Tsukamoto, Natsuki; Tsuruta, Setsuo
A delivery route optimization that improves the efficiency of real time delivery or a distribution network requires solving several tens to hundreds but less than 2 thousands cities Traveling Salesman Problems (TSP) within interactive response time (less than about 3 second), with expert-level accuracy (less than about 3% of error rate). Further, to make things more difficult, the optimization is subjects to special requirements or preferences of each various delivery sites, persons, or societies. To meet these requirements, an Inner Random Restart Genetic Algorithm (Irr-GA) is proposed and developed. This method combines meta-heuristics such as random restart and GA having different types of simple heuristics. Such simple heuristics are 2-opt and NI (Nearest Insertion) methods, each applied for gene operations. The proposed method is hierarchical structured, integrating meta-heuristics and heuristics both of which are multiple but simple. This method is elaborated so that field experts as well as field engineers can easily understand to make the solution or method easily customized and extended according to customers' needs or taste. Comparison based on the experimental results and consideration proved that the method meets the above requirements more than other methods judging from not only optimality but also simplicity, flexibility, and expandability in order for this method to be practically used.
Bicriteria Network Optimization Problem using Priority-based Genetic Algorithm
NASA Astrophysics Data System (ADS)
Gen, Mitsuo; Lin, Lin; Cheng, Runwei
Network optimization is being an increasingly important and fundamental issue in the fields such as engineering, computer science, operations research, transportation, telecommunication, decision support systems, manufacturing, and airline scheduling. In many applications, however, there are several criteria associated with traversing each edge of a network. For example, cost and flow measures are both important in the networks. As a result, there has been recent interest in solving Bicriteria Network Optimization Problem. The Bicriteria Network Optimization Problem is known a NP-hard. The efficient set of paths may be very large, possibly exponential in size. Thus the computational effort required to solve it can increase exponentially with the problem size in the worst case. In this paper, we propose a genetic algorithm (GA) approach used a priority-based chromosome for solving the bicriteria network optimization problem including maximum flow (MXF) model and minimum cost flow (MCF) model. The objective is to find the set of Pareto optimal solutions that give possible maximum flow with minimum cost. This paper also combines Adaptive Weight Approach (AWA) that utilizes some useful information from the current population to readjust weights for obtaining a search pressure toward a positive ideal point. Computer simulations show the several numerical experiments by using some difficult-to-solve network design problems, and show the effectiveness of the proposed method.
Improvement of unsupervised texture classification based on genetic algorithms
NASA Astrophysics Data System (ADS)
Okumura, Hiroshi; Togami, Yuuki; Arai, Kohei
2004-11-01
At the previous conference, the authors are proposed a new unsupervised texture classification method based on the genetic algorithms (GA). In the method, the GA are employed to determine location and size of the typical textures in the target image. The proposed method consists of the following procedures: 1) the determination of the number of classification category; 2) each chromosome used in the GA consists of coordinates of center pixel of each training area candidate and those size; 3) 50 chromosomes are generated using random number; 4) fitness of each chromosome is calculated; the fitness is the product of the Classification Reliability in the Mixed Texture Cases (CRMTC) and the Stability of NZMV against Scanning Field of View Size (SNSFS); 5) in the selection operation in the GA, the elite preservation strategy is employed; 6) in the crossover operation, multi point crossover is employed and two parent chromosomes are selected by the roulette strategy; 7) in mutation operation, the locuses where the bit inverting occurs are decided by a mutation rate; 8) go to the procedure 4. However, this method has not been automated because it requires not only target image but also the number of categories for classification. In this paper, we describe some improvement for implementation of automated texture classification. Some experiments are conducted to evaluate classification capability of the proposed method by using images from Brodatz's photo album and actual airborne multispectral scanner. The experimental results show that the proposed method can select appropriate texture samples and can provide reasonable classification results.
Optimizing SRF Gun Cavity Profiles in a Genetic Algorithm Framework
Alicia Hofler, Pavel Evtushenko, Frank Marhauser
2009-09-01
Automation of DC photoinjector designs using a genetic algorithm (GA) based optimization is an accepted practice in accelerator physics. Allowing the gun cavity field profile shape to be varied can extend the utility of this optimization methodology to superconducting and normal conducting radio frequency (SRF/RF) gun based injectors. Finding optimal field and cavity geometry configurations can provide guidance for cavity design choices and verify existing designs. We have considered two approaches for varying the electric field profile. The first is to determine the optimal field profile shape that should be used independent of the cavity geometry, and the other is to vary the geometry of the gun cavity structure to produce an optimal field profile. The first method can provide a theoretical optimal and can illuminate where possible gains can be made in field shaping. The second method can produce more realistically achievable designs that can be compared to existing designs. In this paper, we discuss the design and implementation for these two methods for generating field profiles for SRF/RF guns in a GA based injector optimization scheme and provide preliminary results.
Application of genetic algorithm on optimization of laser beam shaping.
Tsai, Cheng-Mu; Fang, Yi-Chin; Lin, Chia-Te
2015-06-15
This study proposes a newly developed optimization method for an aspherical lens system employed in a refractive laser beam shaping system, which performs transformations on laser spots such that they are transformed into flat-tops of any size. In this paper, a genetic algorithm (GA) with multipoint search is proposed as the optimization method, together with macro language in optical simulation software, in order to search for ideal and optimized parameters. In comparison to a traditional two-dimensional (2D) computational method, using the one-dimensional (1D) computation for laser beam shaping can search for the optimal solution approximately twice as fast (after experiments). The optimal results show that when the laser spot shrinks from 3 mm to 1.07 mm, 88% uniformity is achieved, and when the laser spot increases from 3 mm to 5.273 mm, 90% uniformity is achieved. The distances between the lenses for both systems described above are even smaller than the thickness for the first lens, enabling us to conclude that our design objectives of extra light and slimness in the system are achieved. PMID:26193566
Innovative Applications of Genetic Algorithms to Problems in Accelerator Physics
Hofler, Alicia; Terzic, Balsa; Kramer, Matthew; Zvezdin, Anton; Morozov, Vasiliy; Roblin, Yves; Lin, Fanglei; Jarvis, Colin
2013-01-01
The genetic algorithm (GA) is a relatively new technique that implements the principles nature uses in biological evolution in order to optimize a multidimensional nonlinear problem. The GA works especially well for problems with a large number of local extrema, where traditional methods (such as conjugate gradient, steepest descent, and others) fail or, at best, underperform. The field of accelerator physics, among others, abounds with problems which lend themselves to optimization via GAs. In this paper, we report on the successful application of GAs in several problems related to the existing CEBAF facility, the proposed MEIC at Jefferson Lab, and a radio frequency (RF) gun based injector. These encouraging results are a step forward in optimizing accelerator design and provide an impetus for application of GAs to other problems in the field. To that end, we discuss the details of the GAs used, including a newly devised enhancement, which leads to improved convergence to the optimum and make recommendations for future GA developments and accelerator applications.
Genetic algorithm optimized triply compensated pulses in NMR spectroscopy.
Manu, V S; Veglia, Gianluigi
2015-11-01
Sensitivity and resolution in NMR experiments are affected by magnetic field inhomogeneities (of both external and RF), errors in pulse calibration, and offset effects due to finite length of RF pulses. To remedy these problems, built-in compensation mechanisms for these experimental imperfections are often necessary. Here, we propose a new family of phase-modulated constant-amplitude broadband pulses with high compensation for RF inhomogeneity and heteronuclear coupling evolution. These pulses were optimized using a genetic algorithm (GA), which consists in a global optimization method inspired by Nature's evolutionary processes. The newly designed π and π/2 pulses belong to the 'type A' (or general rotors) symmetric composite pulses. These GA-optimized pulses are relatively short compared to other general rotors and can be used for excitation and inversion, as well as refocusing pulses in spin-echo experiments. The performance of the GA-optimized pulses was assessed in Magic Angle Spinning (MAS) solid-state NMR experiments using a crystalline U-(13)C, (15)N NAVL peptide as well as U-(13)C, (15)N microcrystalline ubiquitin. GA optimization of NMR pulse sequences opens a window for improving current experiments and designing new robust pulse sequences. PMID:26473327
Improved satellite image compression and reconstruction via genetic algorithms
NASA Astrophysics Data System (ADS)
Babb, Brendan; Moore, Frank; Peterson, Michael; Lamont, Gary
2008-10-01
A wide variety of signal and image processing applications, including the US Federal Bureau of Investigation's fingerprint compression standard [3] and the JPEG-2000 image compression standard [26], utilize wavelets. This paper describes new research that demonstrates how a genetic algorithm (GA) may be used to evolve transforms that outperform wavelets for satellite image compression and reconstruction under conditions subject to quantization error. The new approach builds upon prior work by simultaneously evolving real-valued coefficients representing matched forward and inverse transform pairs at each of three levels of a multi-resolution analysis (MRA) transform. The training data for this investigation consists of actual satellite photographs of strategic urban areas. Test results show that a dramatic reduction in the error present in reconstructed satellite images may be achieved without sacrificing the compression capabilities of the forward transform. The transforms evolved during this research outperform previous start-of-the-art solutions, which optimized coefficients for the reconstruction transform only. These transforms also outperform wavelets, reducing error by more than 0.76 dB at a quantization level of 64. In addition, transforms trained using representative satellite images do not perform quite as well when subsequently tested against images from other classes (such as fingerprints or portraits). This result suggests that the GA developed for this research is automatically learning to exploit specific attributes common to the class of images represented in the training population.
Optimal vaccination schedule search using genetic algorithm over MPI technology
2012-01-01
Background Immunological strategies that achieve the prevention of tumor growth are based on the presumption that the immune system, if triggered before tumor onset, could be able to defend from specific cancers. In supporting this assertion, in the last decade active immunization approaches prevented some virus-related cancers in humans. An immunopreventive cell vaccine for the non-virus-related human breast cancer has been recently developed. This vaccine, called Triplex, targets the HER-2-neu oncogene in HER-2/neu transgenic mice and has shown to almost completely prevent HER-2/neu-driven mammary carcinogenesis when administered with an intensive and life-long schedule. Methods To better understand the preventive efficacy of the Triplex vaccine in reduced schedules we employed a computational approach. The computer model developed allowed us to test in silico specific vaccination schedules in the quest for optimality. Specifically here we present a parallel genetic algorithm able to suggest optimal vaccination schedule. Results & Conclusions The enormous complexity of combinatorial space to be explored makes this approach the only possible one. The suggested schedule was then tested in vivo, giving good results. Finally, biologically relevant outcomes of optimization are presented. PMID:23148787
Coil optimization for electromagnetic levitation using a genetic like algorithm
NASA Astrophysics Data System (ADS)
Royer, Z. L.; Tackes, C.; LeSar, R.; Napolitano, R. E.
2013-06-01
The technique of electromagnetic levitation (EML) provides a means for thermally processing an electrically conductive specimen in a containerless manner. For the investigation of metallic liquids and related melting or freezing transformations, the elimination of substrate-induced nucleation affords access to much higher undercooling than otherwise attainable. With heating and levitation both arising from the currents induced by the coil, the performance of any EML system depends on controlling the balance between lifting forces and heating effects, as influenced by the levitation coil geometry. In this work, a genetic algorithm is developed and utilized to optimize the design of electromagnetic levitation coils. The optimization is targeted specifically to reduce the steady-state temperature of the stably levitated metallic specimen. Reductions in temperature of nominally 70 K relative to that obtained with the initial design are achieved through coil optimization, and the results are compared with experiments for aluminum. Additionally, the optimization method is shown to be robust, generating a small range of converged results from a variety of initial starting conditions. While our optimization criterion was set to achieve the lowest possible sample temperature, the method is general and can be used to optimize for other criteria as well.
Orbit determination by genetic algorithm and application to GEO observation
NASA Astrophysics Data System (ADS)
Hinagawa, Hideaki; Yamaoka, Hitoshi; Hanada, Toshiya
2014-02-01
This paper demonstrates an initial orbit determination method that solves the problem by a genetic algorithm using two well-known solutions for the Lambert's problem: universal variable method and Battin method. This paper also suggests an intuitive error evaluation method in terms of rotational angle and orbit shape by separating orbit elements into two groups. As reference orbit, mean orbit elements (original two-lines elements) and osculating orbit elements considering the J2 effect are adopted and compared. Our proposed orbit determination method has been tested with actual optical observations of a geosynchronous spacecraft. It should be noted that this demonstration of the orbit determination is limited to one test case. This observation was conducted during approximately 70 min on 2013/05/15 UT. Our method was compared with the orbit elements propagated by SGP4 using the TLE of the spacecraft. The result indicates that our proposed method had a slightly better performance on estimating orbit shape than Gauss's methods and Escobal's method by 120 km. In addition, the result of the rotational angle is closer to the osculating orbit elements than the mean orbit elements by 0.02°, which supports that the estimated orbit is valid.
Improved interpretation of satellite altimeter data using genetic algorithms
NASA Technical Reports Server (NTRS)
Messa, Kenneth; Lybanon, Matthew
1992-01-01
Genetic algorithms (GA) are optimization techniques that are based on the mechanics of evolution and natural selection. They take advantage of the power of cumulative selection, in which successive incremental improvements in a solution structure become the basis for continued development. A GA is an iterative procedure that maintains a 'population' of 'organisms' (candidate solutions). Through successive 'generations' (iterations) the population as a whole improves in simulation of Darwin's 'survival of the fittest'. GA's have been shown to be successful where noise significantly reduces the ability of other search techniques to work effectively. Satellite altimetry provides useful information about oceanographic phenomena. It provides rapid global coverage of the oceans and is not as severely hampered by cloud cover as infrared imagery. Despite these and other benefits, several factors lead to significant difficulty in interpretation. The GA approach to the improved interpretation of satellite data involves the representation of the ocean surface model as a string of parameters or coefficients from the model. The GA searches in parallel, a population of such representations (organisms) to obtain the individual that is best suited to 'survive', that is, the fittest as measured with respect to some 'fitness' function. The fittest organism is the one that best represents the ocean surface model with respect to the altimeter data.
Binocular self-calibration performed via adaptive genetic algorithm based on laser line imaging
NASA Astrophysics Data System (ADS)
Apolinar Muñoz Rodríguez, J.; Mejía Alanís, Francisco Carlos
2016-07-01
An accurate technique to perform binocular self-calibration by means of an adaptive genetic algorithm based on a laser line is presented. In this calibration, the genetic algorithm computes the vision parameters through simulated binary crossover (SBX). To carry it out, the genetic algorithm constructs an objective function from the binocular geometry of the laser line projection. Then, the SBX minimizes the objective function via chromosomes recombination. In this algorithm, the adaptive procedure determines the search space via line position to obtain the minimum convergence. Thus, the chromosomes of vision parameters provide the minimization. The approach of the proposed adaptive genetic algorithm is to calibrate and recalibrate the binocular setup without references and physical measurements. This procedure leads to improve the traditional genetic algorithms, which calibrate the vision parameters by means of references and an unknown search space. It is because the proposed adaptive algorithm avoids errors produced by the missing of references. Additionally, the three-dimensional vision is carried out based on the laser line position and vision parameters. The contribution of the proposed algorithm is corroborated by an evaluation of accuracy of binocular calibration, which is performed via traditional genetic algorithms.
Functional Localization of Genetic Network Programming
NASA Astrophysics Data System (ADS)
Eto, Shinji; Hirasawa, Kotaro; Hu, Jinglu
According to the knowledge of brain science, it is suggested that there exists cerebral functional localization, which means that a specific part of the cerebrum is activated depending on various kinds of information human receives. The aim of this paper is to build an artificial model to realize functional localization based on Genetic Network Programming (GNP), a new evolutionary computation method recently developed. GNP has a directed graph structure suitable for realizing functional localization. We studied the basic characteristics of the proposed system by making GNP work in a functionally localized way.
A scalable parallel algorithm for multiple objective linear programs
NASA Technical Reports Server (NTRS)
Wiecek, Malgorzata M.; Zhang, Hong
1994-01-01
This paper presents an ADBASE-based parallel algorithm for solving multiple objective linear programs (MOLP's). Job balance, speedup and scalability are of primary interest in evaluating efficiency of the new algorithm. Implementation results on Intel iPSC/2 and Paragon multiprocessors show that the algorithm significantly speeds up the process of solving MOLP's, which is understood as generating all or some efficient extreme points and unbounded efficient edges. The algorithm gives specially good results for large and very large problems. Motivation and justification for solving such large MOLP's are also included.
Accurate construction of consensus genetic maps via integer linear programming.
Wu, Yonghui; Close, Timothy J; Lonardi, Stefano
2011-01-01
We study the problem of merging genetic maps, when the individual genetic maps are given as directed acyclic graphs. The computational problem is to build a consensus map, which is a directed graph that includes and is consistent with all (or, the vast majority of) the markers in the input maps. However, when markers in the individual maps have ordering conflicts, the resulting consensus map will contain cycles. Here, we formulate the problem of resolving cycles in the context of a parsimonious paradigm that takes into account two types of errors that may be present in the input maps, namely, local reshuffles and global displacements. The resulting combinatorial optimization problem is, in turn, expressed as an integer linear program. A fast approximation algorithm is proposed, and an additional speedup heuristic is developed. Our algorithms were implemented in a software tool named MERGEMAP which is freely available for academic use. An extensive set of experiments shows that MERGEMAP consistently outperforms JOINMAP, which is the most popular tool currently available for this task, both in terms of accuracy and running time. MERGEMAP is available for download at http://www.cs.ucr.edu/~yonghui/mgmap.html. PMID:20479505
In-Space Radiator Shape Optimization using Genetic Algorithms
NASA Technical Reports Server (NTRS)
Hull, Patrick V.; Kittredge, Ken; Tinker, Michael; SanSoucie, Michael
2006-01-01
Future space exploration missions will require the development of more advanced in-space radiators. These radiators should be highly efficient and lightweight, deployable heat rejection systems. Typical radiators for in-space heat mitigation commonly comprise a substantial portion of the total vehicle mass. A small mass savings of even 5-10% can greatly improve vehicle performance. The objective of this paper is to present the development of detailed tools for the analysis and design of in-space radiators using evolutionary computation techniques. The optimality criterion is defined as a two-dimensional radiator with a shape demonstrating the smallest mass for the greatest overall heat transfer, thus the end result is a set of highly functional radiator designs. This cross-disciplinary work combines topology optimization and thermal analysis design by means of a genetic algorithm The proposed design tool consists of the following steps; design parameterization based on the exterior boundary of the radiator, objective function definition (mass minimization and heat loss maximization), objective function evaluation via finite element analysis (thermal radiation analysis) and optimization based on evolutionary algorithms. The radiator design problem is defined as follows: the input force is a driving temperature and the output reaction is heat loss. Appropriate modeling of the space environment is added to capture its effect on the radiator. The design parameters chosen for this radiator shape optimization problem fall into two classes, variable height along the width of the radiator and a spline curve defining the -material boundary of the radiator. The implementation of multiple design parameter schemes allows the user to have more confidence in the radiator optimization tool upon demonstration of convergence between the two design parameter schemes. This tool easily allows the user to manipulate the driving temperature regions thus permitting detailed design of in
A novel pseudoderivative-based mutation operator for real-coded adaptive genetic algorithms
Kanwal, Maxinder S; Ramesh, Avinash S; Huang, Lauren A
2013-01-01
Recent development of large databases, especially those in genetics and proteomics, is pushing the development of novel computational algorithms that implement rapid and accurate search strategies. One successful approach has been to use artificial intelligence and methods, including pattern recognition (e.g. neural networks) and optimization techniques (e.g. genetic algorithms). The focus of this paper is on optimizing the design of genetic algorithms by using an adaptive mutation rate that is derived from comparing the fitness values of successive generations. We propose a novel pseudoderivative-based mutation rate operator designed to allow a genetic algorithm to escape local optima and successfully continue to the global optimum. Once proven successful, this algorithm can be implemented to solve real problems in neurology and bioinformatics. As a first step towards this goal, we tested our algorithm on two 3-dimensional surfaces with multiple local optima, but only one global optimum, as well as on the N-queens problem, an applied problem in which the function that maps the curve is implicit. For all tests, the adaptive mutation rate allowed the genetic algorithm to find the global optimal solution, performing significantly better than other search methods, including genetic algorithms that implement fixed mutation rates. PMID:24627784
A weight based genetic algorithm for selecting views
NASA Astrophysics Data System (ADS)
Talebian, Seyed H.; Kareem, Sameem A.
2013-03-01
Data warehouse is a technology designed for supporting decision making. Data warehouse is made by extracting large amount of data from different operational systems; transforming it to a consistent form and loading it to the central repository. The type of queries in data warehouse environment differs from those in operational systems. In contrast to operational systems, the analytical queries that are issued in data warehouses involve summarization of large volume of data and therefore in normal circumstance take a long time to be answered. On the other hand, the result of these queries must be answered in a short time to enable managers to make decisions as short time as possible. As a result, an essential need in this environment is in improving the performances of queries. One of the most popular methods to do this task is utilizing pre-computed result of queries. In this method, whenever a new query is submitted by the user instead of calculating the query on the fly through a large underlying database, the pre-computed result or views are used to answer the queries. Although, the ideal option would be pre-computing and saving all possible views, but, in practice due to disk space constraint and overhead due to view updates it is not considered as a feasible choice. Therefore, we need to select a subset of possible views to save on disk. The problem of selecting the right subset of views is considered as an important challenge in data warehousing. In this paper we suggest a Weighted Based Genetic Algorithm (WBGA) for solving the view selection problem with two objectives.
GRAVITATIONAL LENS MODELING WITH GENETIC ALGORITHMS AND PARTICLE SWARM OPTIMIZERS
Rogers, Adam; Fiege, Jason D.
2011-02-01
Strong gravitational lensing of an extended object is described by a mapping from source to image coordinates that is nonlinear and cannot generally be inverted analytically. Determining the structure of the source intensity distribution also requires a description of the blurring effect due to a point-spread function. This initial study uses an iterative gravitational lens modeling scheme based on the semilinear method to determine the linear parameters (source intensity profile) of a strongly lensed system. Our 'matrix-free' approach avoids construction of the lens and blurring operators while retaining the least-squares formulation of the problem. The parameters of an analytical lens model are found through nonlinear optimization by an advanced genetic algorithm (GA) and particle swarm optimizer (PSO). These global optimization routines are designed to explore the parameter space thoroughly, mapping model degeneracies in detail. We develop a novel method that determines the L-curve for each solution automatically, which represents the trade-off between the image {chi}{sup 2} and regularization effects, and allows an estimate of the optimally regularized solution for each lens parameter set. In the final step of the optimization procedure, the lens model with the lowest {chi}{sup 2} is used while the global optimizer solves for the source intensity distribution directly. This allows us to accurately determine the number of degrees of freedom in the problem to facilitate comparison between lens models and enforce positivity on the source profile. In practice, we find that the GA conducts a more thorough search of the parameter space than the PSO.
The use of genetic algorithms to model protoplanetary discs
NASA Astrophysics Data System (ADS)
Hetem, Annibal; Gregorio-Hetem, Jane
2007-12-01
The protoplanetary discs of T Tauri and Herbig Ae/Be stars have previously been studied using geometric disc models to fit their spectral energy distribution (SED). The simulations provide a means to reproduce the signatures of various circumstellar structures, which are related to different levels of infrared excess. With the aim of improving our previous model, which assumed a simple flat-disc configuration, we adopt here a reprocessing flared-disc model that assumes hydrostatic, radiative equilibrium. We have developed a method to optimize the parameter estimation based on genetic algorithms (GAs). This paper describes the implementation of the new code, which has been applied to Herbig stars from the Pico dos Dias Survey catalogue, in order to illustrate the quality of the fitting for a variety of SED shapes. The star AB Aur was used as a test of the GA parameter estimation, and demonstrates that the new code reproduces successfully a canonical example of the flared-disc model. The GA method gives a good quality of fit, but the range of input parameters must be chosen with caution, as unrealistic disc parameters can be derived. It is confirmed that the flared-disc model fits the flattened SEDs typical of Herbig stars; however, embedded objects (increasing SED slope) and debris discs (steeply decreasing SED slope) are not well fitted with this configuration. Even considering the limitation of the derived parameters, the automatic process of SED fitting provides an interesting tool for the statistical analysis of the circumstellar luminosity of large samples of young stars.
Yoshimaru, Eriko S.; Randtke, Edward A.; Pagel, Mark D.; Cárdenas-Rodríguez, Julio
2016-01-01
Pulsed Chemical Exchange Saturation Transfer (CEST) MRI experimental parameters and RF saturation pulse shapes were optimized using a multiobjective genetic algorithm. The optimization was carried out for RF saturation duty cycles of 50% and 90%, and results were compared to continuous wave saturation and Gaussian waveform. In both simulation and phantom experiments, continuous wave saturation performed the best, followed by parameters and shapes optimized by the genetic algorithm and then followed by Gaussian waveform. We have successfully demonstrated that the genetic algorithm is able to optimize pulse CEST parameters and that the results are translatable to clinical scanners. PMID:26778301
Self-calibration of a noisy multiple-sensor system with genetic algorithms
NASA Astrophysics Data System (ADS)
Brooks, Richard R.; Iyengar, S. Sitharama; Chen, Jianhua
1996-01-01
This paper explores an image processing application of optimization techniques which entails interpreting noisy sensor data. The application is a generalization of image correlation; we attempt to find the optimal gruence which matches two overlapping gray-scale images corrupted with noise. Both taboo search and genetic algorithms are used to find the parameters which match the two images. A genetic algorithm approach using an elitist reproduction scheme is found to provide significantly superior results. The presentation includes a graphic presentation of the paths taken by tabu search and genetic algorithms when trying to find the best possible match between two corrupted images.
NASA Astrophysics Data System (ADS)
Yoshimaru, Eriko S.; Randtke, Edward A.; Pagel, Mark D.; Cárdenas-Rodríguez, Julio
2016-02-01
Pulsed Chemical Exchange Saturation Transfer (CEST) MRI experimental parameters and RF saturation pulse shapes were optimized using a multiobjective genetic algorithm. The optimization was carried out for RF saturation duty cycles of 50% and 90%, and results were compared to continuous wave saturation and Gaussian waveform. In both simulation and phantom experiments, continuous wave saturation performed the best, followed by parameters and shapes optimized by the genetic algorithm and then followed by Gaussian waveform. We have successfully demonstrated that the genetic algorithm is able to optimize pulse CEST parameters and that the results are translatable to clinical scanners.
Predicting Student Grades in Learning Management Systems with Multiple Instance Genetic Programming
ERIC Educational Resources Information Center
Zafra, Amelia; Ventura, Sebastian
2009-01-01
The ability to predict a student's performance could be useful in a great number of different ways associated with university-level learning. In this paper, a grammar guided genetic programming algorithm, G3P-MI, has been applied to predict if the student will fail or pass a certain course and identifies activities to promote learning in a…
Radar simulation program upgrade and algorithm development
NASA Technical Reports Server (NTRS)
Britt, Charles L.
1991-01-01
The NASA Radar Simulation Program is a comprehensive calculation of the expected output of an airborne coherent pulse Doppler radar system viewing a low level microburst along or near the approach path. Inputs to the program include the radar system parameters and data files that contain the characteristics of the microbursts to be simulated, the ground clutter map, and the discrete target data base which provides a simulation of the moving ground clutter. For each range bin, the simulation calculates the received signal amplitude level by integrating the product of the antenna gain pattern and the scattering source amplitude and phase of a spherical shell volume segment defined by the pulse width, radar range, and ground plane intersection. A series of in-phase and quadrature pulses are generated and stored for further processing if desired. In addition, various signal processing techniques are used to derive the simulated velocity and hazard measurements, and store them for use in plotting and display programs.
Sensitivity of blackbody effective emissivity to wavelength and temperature: By genetic algorithm
Ejigu, E. K.; Liedberg, H. G.
2013-09-11
A variable-temperature blackbody (VTBB) is used to calibrate an infrared radiation thermometer (pyrometer). The effective emissivity (ε{sub eff}) of a VTBB is dependent on temperature and wavelength other than the geometry of the VTBB. In the calibration process the effective emissivity is often assumed to be constant within the wavelength and temperature range. There are practical situations where the sensitivity of the effective emissivity needs to be known and correction has to be applied. We present a method using a genetic algorithm to investigate the sensitivity of the effective emissivity to wavelength and temperature variation. Two matlab® programs are generated: the first to model the radiance temperature calculation and the second to connect the model to the genetic algorithm optimization toolbox. The effective emissivity parameter is taken as a chromosome and optimized at each wavelength and temperature point. The difference between the contact temperature (reading from a platinum resistance thermometer or liquid in glass thermometer) and radiance temperature (calculated from the ε{sub eff} values) is used as an objective function where merit values are calculated and best fit ε{sub eff} values selected. The best fit ε{sub eff} values obtained as a solution show how sensitive they are to temperature and wavelength parameter variation. Uncertainty components that arise from wavelength and temperature variation are determined based on the sensitivity analysis. Numerical examples are considered for illustration.
Genetic programs constructed from layered logic gates in single cells
Moon, Tae Seok; Lou, Chunbo; Tamsir, Alvin; Stanton, Brynne C.; Voigt, Christopher A.
2014-01-01
Genetic programs function to integrate environmental sensors, implement signal processing algorithms and control expression dynamics1. These programs consist of integrated genetic circuits that individually implement operations ranging from digital logic to dynamic circuits2–6, and they have been used in various cellular engineering applications, including the implementation of process control in metabolic networks and the coordination of spatial differentiation in artificial tissues. A key limitation is that the circuits are based on biochemical interactions occurring in the confined volume of the cell, so the size of programs has been limited to a few circuits1,7. Here we apply part mining and directed evolution to build a set of transcriptional AND gates in Escherichia coli. Each AND gate integrates two promoter inputs and controls one promoter output. This allows the gates to be layered by having the output promoter of an upstream circuit serve as the input promoter for a downstream circuit. Each gate consists of a transcription factor that requires a second chaperone protein to activate the output promoter. Multiple activator–chaperone pairs are identified from type III secretion pathways in different strains of bacteria. Directed evolution is applied to increase the dynamic range and orthogonality of the circuits. These gates are connected in different permutations to form programs, the largest of which is a 4-input AND gate that consists of 3 circuits that integrate 4 inducible systems, thus requiring 11 regulatory proteins. Measuring the performance of individual gates is sufficient to capture the behaviour of the complete program. Errors in the output due to delays (faults), a common problem for layered circuits, are not observed. This work demonstrates the successful layering of orthogonal logic gates, a design strategy that could enable the construction of large, integrated circuits in single cells. PMID:23041931
Double Motor Coordinated Control Based on Hybrid Genetic Algorithm and CMAC
NASA Astrophysics Data System (ADS)
Cao, Shaozhong; Tu, Ji
A novel hybrid cerebellar model articulation controller (CMAC) and online adaptive genetic algorithm (GA) controller is introduced to control two Brushless DC motor (BLDCM) which applied in a biped robot. Genetic Algorithm simulates the random learning among the individuals of a group, and CMAC simulates the self-learning of an individual. To validate the ability and superiority of the novel algorithm, experiments have been done in MATLAB/SIMULINK. Analysis among GA, hybrid GA-CMAC and CMAC feed-forward control is also given. The results prove that the torque ripple of the coordinated control system is eliminated by using the hybrid GA-CMAC algorithm.
Evaluation of a statewide program in genetic diseases.
Mitchell, J A; Petroski, G
1998-07-01
We used the Genetics Office Automation System (GOAS), a database management system designed to facilitate collection and analysis of medical genetic data, to evaluate the Missouri Genetics Disease Program (MGDP). From 1985 through 1995, patient data were collected at four tertiary care genetic centers. The number of genetic visits per 100,000 people more than doubled from 1985 through 1995. The results of subpopulation analyses indicate that the MGDP has facilitated improvements in: (1) services for newborns and infants, (2) rural outreach programs, and (3) evaluation of the incidence and impact of genetic disorders. PMID:9677054
Suspended sediment modeling using genetic programming and soft computing techniques
NASA Astrophysics Data System (ADS)
Kisi, Ozgur; Dailr, Ali Hosseinzadeh; Cimen, Mesut; Shiri, Jalal
2012-07-01
SummaryModeling suspended sediment load is an important factor in water resources engineering as it crucially affects the design and management of water resources structures. In this study the genetic programming (GP) technique was applied for estimating the daily suspended sediment load in two stations in Cumberland River in U.S. Daily flow and sediment data from 1972 to 1989 were used to train and test the applied genetic programming models. The effect of various GP operators on sediment load estimation was investigated. The optimal fitness function, operator functions, linking function and learning algorithm were obtained for modeling daily suspended sediment. The GP estimates were compared with those of the Adaptive Neuro-Fuzzy Inference System (ANFIS), Artificial Neural Networks (ANNs) and Support Vector Machine (SVM) results, in term of coefficient of determination, mean absolute error, coefficient of residual mass and variance accounted for. The comparison results indicated that the GP is superior to the ANFIS, ANN and SVM models in estimating daily suspended sediment load.
Multitask visual learning using genetic programming.
Jaśkowski, Wojciech; Krawiec, Krzysztof; Wieloch, Bartosz
2008-01-01
We propose a multitask learning method of visual concepts within the genetic programming (GP) framework. Each GP individual is composed of several trees that process visual primitives derived from input images. Two trees solve two different visual tasks and are allowed to share knowledge with each other by commonly calling the remaining GP trees (subfunctions) included in the same individual. The performance of a particular tree is measured by its ability to reproduce the shapes contained in the training images. We apply this method to visual learning tasks of recognizing simple shapes and compare it to a reference method. The experimental verification demonstrates that such multitask learning often leads to performance improvements in one or both solved tasks, without extra computational effort. PMID:19053494
Genetic Algorithm for Initial Orbit Determination with Too Short Arc (Continued)
NASA Astrophysics Data System (ADS)
Li, X. R.; Wang, X.
2016-03-01
When using the genetic algorithm to solve the problem of too-short-arc (TSA) determination, due to the difference of computing processes between the genetic algorithm and classical method, the methods for outliers editing are no longer applicable. In the genetic algorithm, the robust estimation is acquired by means of using different loss functions in the fitness function, then the outlier problem of TSAs is solved. Compared with the classical method, the application of loss functions in the genetic algorithm is greatly simplified. Through the comparison of results of different loss functions, it is clear that the methods of least median square and least trimmed square can greatly improve the robustness of TSAs, and have a high breakdown point.
Genetic algorithms - A new technique for solving the neutron spectrum unfolding problem
NASA Astrophysics Data System (ADS)
Freeman, David W.; Ray Edwards, D.; Bolon, Albert E.
1999-04-01
A new technique utilizing genetic algorithms has been applied to the Bonner sphere neutron spectrum unfolding problem. Genetic algorithms are part of a relatively new field of "evolutionary" solution techniques that mimic living systems with computer-simulated "chromosome" solutions. Solutions mate and mutate to create better solutions. Several benchmark problems, considered representative of radiation protection environments, have been evaluated using the newly developed UMRGA code which implements the genetic algorithm unfolding technique. The results are compared with results from other well-established unfolding codes. The genetic algorithm technique works remarkably well and produces solutions with relatively high spectral qualities. UMRGA appears to be a superior technique in the absence of a priori data - it does not rely on "lucky" guesses of input spectra. Calculated personnel doses associated with the unfolded spectra match benchmark values within a few percent.
NASA Technical Reports Server (NTRS)
Wang, Lui; Valenzuela-Rendon, Manuel
1993-01-01
The Space Station Freedom will require the supply of items in a regular fashion. A schedule for the delivery of these items is not easy to design due to the large span of time involved and the possibility of cancellations and changes in shuttle flights. This paper presents the basic concepts of a genetic algorithm model, and also presents the results of an effort to apply genetic algorithms to the design of propellant resupply schedules. As part of this effort, a simple simulator and an encoding by which a genetic algorithm can find near optimal schedules have been developed. Additionally, this paper proposes ways in which robust schedules, i.e., schedules that can tolerate small changes, can be found using genetic algorithms.
Genetic Algorithm Calibration of Probabilistic Cellular Automata for Modeling Mining Permit Activity
Louis, S.J.; Raines, G.L.
2003-01-01
We use a genetic algorithm to calibrate a spatially and temporally resolved cellular automata to model mining activity on public land in Idaho and western Montana. The genetic algorithm searches through a space of transition rule parameters of a two dimensional cellular automata model to find rule parameters that fit observed mining activity data. Previous work by one of the authors in calibrating the cellular automaton took weeks - the genetic algorithm takes a day and produces rules leading to about the same (or better) fit to observed data. These preliminary results indicate that genetic algorithms are a viable tool in calibrating cellular automata for this application. Experience gained during the calibration of this cellular automata suggests that mineral resource information is a critical factor in the quality of the results. With automated calibration, further refinements of how the mineral-resource information is provided to the cellular automaton will probably improve our model.
NASA Astrophysics Data System (ADS)
Que, Dashun; Li, Gang; Yue, Peng
2007-12-01
An adaptive optimization watermarking algorithm based on Genetic Algorithm (GA) and discrete wavelet transform (DWT) is proposed in this paper. The core of this algorithm is the fitness function optimization model for digital watermarking based on GA. The embedding intensity for digital watermarking can be modified adaptively, and the algorithm can effectively ensure the imperceptibility of watermarking while the robustness is ensured. The optimization model research may provide a new idea for anti-coalition attacks of digital watermarking algorithm. The paper has fulfilled many experiments, including the embedding and extracting experiments of watermarking, the influence experiments by the weighting factor, the experiments of embedding same watermarking to the different cover image, the experiments of embedding different watermarking to the same cover image, the comparative analysis experiments between this optimization algorithm and human visual system (HVS) algorithm and etc. The simulation results and the further analysis show the effectiveness and advantage of the new algorithm, which also has versatility and expandability. And meanwhile it has better ability of anti-coalition attacks. Moreover, the robustness and security of watermarking algorithm are improved by scrambling transformation and chaotic encryption while preprocessing the watermarking.
EDGA: A Population Evolution Direction-Guided Genetic Algorithm for Protein-Ligand Docking.
Guan, Boxin; Zhang, Changsheng; Ning, Jiaxu
2016-07-01
Protein-ligand docking can be formulated as a search algorithm associated with an accurate scoring function. However, most current search algorithms cannot show good performance in docking problems, especially for highly flexible docking. To overcome this drawback, this article presents a novel and robust optimization algorithm (EDGA) based on the Lamarckian genetic algorithm (LGA) for solving flexible protein-ligand docking problems. This method applies a population evolution direction-guided model of genetics, in which search direction evolves to the optimum solution. The method is more efficient to find the lowest energy of protein-ligand docking. We consider four search methods-a tradition genetic algorithm, LGA, SODOCK, and EDGA-and compare their performance in docking of six protein-ligand docking problems. The results show that EDGA is the most stable, reliable, and successful. PMID:26895461
Fernandez-Lozano, C.; Canto, C.; Gestal, M.; Andrade-Garda, J. M.; Rabuñal, J. R.; Dorado, J.; Pazos, A.
2013-01-01
Given the background of the use of Neural Networks in problems of apple juice classification, this paper aim at implementing a newly developed method in the field of machine learning: the Support Vector Machines (SVM). Therefore, a hybrid model that combines genetic algorithms and support vector machines is suggested in such a way that, when using SVM as a fitness function of the Genetic Algorithm (GA), the most representative variables for a specific classification problem can be selected. PMID:24453933
NASA Astrophysics Data System (ADS)
Spinella-Mamo, V.; Paranjape, M.
2009-02-01
Both ferrofluidics and genetic algorithms are relatively new fields. Due to complex physical interactions, ferrofluidic topographies and assemblies have only been solved using finite time step, Lattice Boltzmann, and finite-element methods in very simple magnetic field configurations. In this paper, we show that it is possible (and highly advantageous) to employ genetic algorithms to solve for the fluid topographies, which can be extended to include more complex magnetic fields.
Truss Optimization for a Manned Nuclear Electric Space Vehicle using Genetic Algorithms
NASA Technical Reports Server (NTRS)
Benford, Andrew; Tinker, Michael L.
2004-01-01
The purpose of this paper is to utilize the genetic algorithm (GA) optimization method for structural design of a nuclear propulsion vehicle. Genetic algorithms provide a guided, random search technique that mirrors biological adaptation. To verify the GA capabilities, other traditional optimization methods were used to generate results for comparison to the GA results, first for simple two-dimensional structures, and then for full-scale three-dimensional truss designs.
Development of Web-Based Menu Planning Support System and its Solution Using Genetic Algorithm
NASA Astrophysics Data System (ADS)
Kashima, Tomoko; Matsumoto, Shimpei; Ishii, Hiroaki
2009-10-01
Recently lifestyle-related diseases have become an object of public concern, while at the same time people are being more health conscious. As an essential factor for causing the lifestyle-related diseases, we assume that the knowledge circulation on dietary habits is still insufficient. This paper focuses on everyday meals close to our life and proposes a well-balanced menu planning system as a preventive measure of lifestyle-related diseases. The system is developed by using a Web-based frontend and it provides multi-user services and menu information sharing capabilities like social networking services (SNS). The system is implemented on a Web server running Apache (HTTP server software), MySQL (database management system), and PHP (scripting language for dynamic Web pages). For the menu planning, a genetic algorithm is applied by understanding this problem as multidimensional 0-1 integer programming.
Optimal groundwater remediation using artificial neural networks and the genetic algorithm
Rogers, L.L.
1992-08-01
An innovative computational approach for the optimization of groundwater remediation is presented which uses artificial neural networks (ANNs) and the genetic algorithm (GA). In this approach, the ANN is trained to predict an aspect of the outcome of a flow and transport simulation. Then the GA searches through realizations or patterns of pumping and uses the trained network to predict the outcome of the realizations. This approach has advantages of parallel processing of the groundwater simulations and the ability to ``recycle`` or reuse the base of knowledge formed by these simulations. These advantages offer reduction of computational burden of the groundwater simulations relative to a more conventional approach which uses nonlinear programming (NLP) with a quasi-newtonian search. Also the modular nature of this approach facilitates substitution of different groundwater simulation models.
Genetic algorithm based design optimization of a permanent magnet brushless dc motor
NASA Astrophysics Data System (ADS)
Upadhyay, P. R.; Rajagopal, K. R.
2005-05-01
Genetic algorithm (GA) based design optimization of a permanent magnet brushless dc motor is presented in this paper. A 70 W, 350 rpm, ceiling fan motor with radial-filed configuration is designed by considering the efficiency as the objective function. Temperature-rise and motor weight are the constraints and the slot electric loading, magnet-fraction, slot-fraction, airgap, and airgap flux density are the design variables. The efficiency and the phase-inductance of the motor designed using the developed CAD program are improved by using the GA based optimization technique; from 84.75% and 5.55 mH to 86.06% and 2.4 mH, respectively.
NASA Technical Reports Server (NTRS)
Tinker, Michael L.; Steincamp, James W.; Stewart, Eric T.; Patton, Bruce W.; Pannell, William P.; Newby, Ronald L.; Coffman, Mark E.; Qualls, A. L.; Bancroft, S.; Molvik, Greg
2003-01-01
The Nuclear Electric Vehicle Optimization Toolset (NEVOT) optimizes the design of all major Nuclear Electric Propulsion (NEP) vehicle subsystems for a defined mission within constraints and optimization parameters chosen by a user. The tool uses a Genetic Algorithm (GA) search technique to combine subsystem designs and evaluate the fitness of the integrated design to fulfill a mission. The fitness of an individual is used within the GA to determine its probability of survival through successive generations in which the designs with low fitness are eliminated and replaced with combinations or mutations of designs with higher fitness. The program can find optimal solutions for different sets of fitness metrics without modification and can create and evaluate vehicle designs that might never be conceived of through traditional design techniques. It is anticipated that the flexible optimization methodology will expand present knowledge of the design trade-offs inherent in designing nuclear powered space vehicles and lead to improved NEP designs.
Visibility conflict resolution for multiple antennae and multi-satellites via genetic algorithm
NASA Astrophysics Data System (ADS)
Lee, Junghyun; Hyun, Chung; Ahn, Hyosung; Wang, Semyung; Choi, Sujin; Jung, Okchul; Chung, Daewon; Ko, Kwanghee
Satellite mission control systems typically are operated by scheduling missions to the visibility between ground stations and satellites. The communication for the mission is achieved by interacting with satellite visibility and ground station support. Specifically, the satellite forms a cone-type visibility passing over a ground station, and the antennas of ground stations support the satellite. When two or more satellites pass by at the same time or consecutively, the satellites may generate a visibility conflict. As the number of satellites increases, solving visibility conflict becomes important issue. In this study, we propose a visibility conflict resolution algorithm of multi-satellites by using a genetic algorithm (GA). The problem is converted to scheduling optimization modeling. The visibility of satellites and the supports of antennas are considered as tasks and resources individually. The visibility of satellites is allocated to the total support time of antennas as much as possible for users to obtain the maximum benefit. We focus on a genetic algorithm approach because the problem is complex and not defined explicitly. The genetic algorithm can be applied to such a complex model since it only needs an objective function and can approach a global optimum. However, the mathematical proof of global optimality for the genetic algorithm is very challenging. Therefore, we apply a greedy algorithm and show that our genetic approach is reasonable by comparing with the performance of greedy algorithm application.
Ensemble of hybrid genetic algorithm for two-dimensional phase unwrapping
NASA Astrophysics Data System (ADS)
Balakrishnan, D.; Quan, C.; Tay, C. J.
2013-06-01
The phase unwrapping is the final and trickiest step in any phase retrieval technique. Phase unwrapping by artificial intelligence methods (optimization algorithms) such as hybrid genetic algorithm, reverse simulated annealing, particle swarm optimization, minimum cost matching showed better results than conventional phase unwrapping methods. In this paper, Ensemble of hybrid genetic algorithm with parallel populations is proposed to solve the branch-cut phase unwrapping problem. In a single populated hybrid genetic algorithm, the selection, cross-over and mutation operators are applied to obtain new population in every generation. The parameters and choice of operators will affect the performance of the hybrid genetic algorithm. The ensemble of hybrid genetic algorithm will facilitate to have different parameters set and different choice of operators simultaneously. Each population will use different set of parameters and the offspring of each population will compete against the offspring of all other populations, which use different set of parameters. The effectiveness of proposed algorithm is demonstrated by phase unwrapping examples and advantages of the proposed method are discussed.
Optimisation in radiotherapy. II: Programmed and inversion optimisation algorithms.
Ebert, M
1997-12-01
This is the second article in a three part examination of optimisation in radiotherapy. The previous article established the bases of optimisation in radiotherapy, and the formulation of the optimisation problem. This paper outlines several algorithms that have been used in radiotherapy, for searching for the best irradiation strategy within the full set of possible strategies. Two principle classes of algorithm are considered--those associated with mathematical programming which employ specific search techniques, linear programming-type searches or artificial intelligence--and those which seek to perform a numerical inversion of the optimisation problem, finishing with deterministic iterative inversion. PMID:9503694
ERIC Educational Resources Information Center
Tran, Huu-Khoa; Chiou, Juing -Shian; Peng, Shou-Tao
2016-01-01
In this paper, the feasibility of a Genetic Algorithm Optimization (GAO) education software based Fuzzy Logic Controller (GAO-FLC) for simulating the flight motion control of Unmanned Aerial Vehicles (UAVs) is designed. The generated flight trajectories integrate the optimized Scaling Factors (SF) fuzzy controller gains by using GAO algorithm. The…
Automated Test Assembly for Cognitive Diagnosis Models Using a Genetic Algorithm
ERIC Educational Resources Information Center
Finkelman, Matthew; Kim, Wonsuk; Roussos, Louis A.
2009-01-01
Much recent psychometric literature has focused on cognitive diagnosis models (CDMs), a promising class of instruments used to measure the strengths and weaknesses of examinees. This article introduces a genetic algorithm to perform automated test assembly alongside CDMs. The algorithm is flexible in that it can be applied whether the goal is to…
ERIC Educational Resources Information Center
Chen, Hsinchun
1995-01-01
Presents an overview of artificial-intelligence-based inductive learning techniques and their use in information science research. Three methods are discussed: the connectionist Hopfield network; the symbolic ID3/ID5R; evolution-based genetic algorithms. The knowledge representations and algorithms of these methods are examined in the context of…
A Fuzzy Genetic Algorithm Approach to an Adaptive Information Retrieval Agent.
ERIC Educational Resources Information Center
Martin-Bautista, Maria J.; Vila, Maria-Amparo; Larsen, Henrik Legind
1999-01-01
Presents an approach to a Genetic Information Retrieval Agent Filter (GIRAF) that filters and ranks documents retrieved from the Internet according to users' preferences by using a Genetic Algorithm and fuzzy set theory to handle the imprecision of users' preferences and users' evaluation of the retrieved documents. (Author/LRW)
An algorithm for the solution of dynamic linear programs
NASA Technical Reports Server (NTRS)
Psiaki, Mark L.
1989-01-01
The algorithm's objective is to efficiently solve Dynamic Linear Programs (DLP) by taking advantage of their special staircase structure. This algorithm constitutes a stepping stone to an improved algorithm for solving Dynamic Quadratic Programs, which, in turn, would make the nonlinear programming method of Successive Quadratic Programs more practical for solving trajectory optimization problems. The ultimate goal is to being trajectory optimization solution speeds into the realm of real-time control. The algorithm exploits the staircase nature of the large constraint matrix of the equality-constrained DLPs encountered when solving inequality-constrained DLPs by an active set approach. A numerically-stable, staircase QL factorization of the staircase constraint matrix is carried out starting from its last rows and columns. The resulting recursion is like the time-varying Riccati equation from multi-stage LQR theory. The resulting factorization increases the efficiency of all of the typical LP solution operations over that of a dense matrix LP code. At the same time numerical stability is ensured. The algorithm also takes advantage of dynamic programming ideas about the cost-to-go by relaxing active pseudo constraints in a backwards sweeping process. This further decreases the cost per update of the LP rank-1 updating procedure, although it may result in more changes of the active set that if pseudo constraints were relaxed in a non-stagewise fashion. The usual stability of closed-loop Linear/Quadratic optimally-controlled systems, if it carries over to strictly linear cost functions, implies that the saving due to reduced factor update effort may outweigh the cost of an increased number of updates. An aerospace example is presented in which a ground-to-ground rocket's distance is maximized. This example demonstrates the applicability of this class of algorithms to aerospace guidance. It also sheds light on the efficacy of the proposed pseudo constraint relaxation
NASA Astrophysics Data System (ADS)
Kanagaraj, G.; Ponnambalam, S. G.; Jawahar, N.; Mukund Nilakantan, J.
2014-10-01
This article presents an effective hybrid cuckoo search and genetic algorithm (HCSGA) for solving engineering design optimization problems involving problem-specific constraints and mixed variables such as integer, discrete and continuous variables. The proposed algorithm, HCSGA, is first applied to 13 standard benchmark constrained optimization functions and subsequently used to solve three well-known design problems reported in the literature. The numerical results obtained by HCSGA show competitive performance with respect to recent algorithms for constrained design optimization problems.
An Evaluation of Potentials of Genetic Algorithm in Shortest Path Problem
NASA Astrophysics Data System (ADS)
Hassany Pazooky, S.; Rahmatollahi Namin, Sh; Soleymani, A.; Samadzadegan, F.
2009-04-01
One of the most typical issues considered in combinatorial systems in transportation networks, is the shortest path problem. In such networks, routing has a significant impact on the network's performance. Due to natural complexity in transportation networks and strong impact of routing in different fields of decision making, such as traffic management and vehicle routing problem (VRP), appropriate solutions to solve this problem are crucial to be determined. During last years, in order to solve the shortest path problem, different solutions are proposed. These techniques are divided into two categories of classic and evolutionary approaches. Two well-known classic algorithms are Dijkstra and A*. Dijkstra is known as a robust, but time consuming algorithm in finding the shortest path problem. A* is also another algorithm very similar to Dijkstra, less robust but with a higher performance. On the other hand, Genetic algorithms are introduced as most applicable evolutionary algorithms. Genetic Algorithm uses a parallel search method in several parts of the domain and is not trapped in local optimums. In this paper, the potentiality of Genetic algorithm for finding the shortest path is evaluated by making a comparison between this algorithm and classic algorithms (Dijkstra and A*). Evaluation of the potential of these techniques on a transportation network in an urban area shows that due to the problem of classic methods in their small search space, GA had a better performance in finding the shortest path.
GASAT: a genetic local search algorithm for the satisfiability problem.
Lardeux, Frédéric; Saubion, Frédéric; Hao, Jin-Kao
2006-01-01
This paper presents GASAT, a hybrid algorithm for the satisfiability problem (SAT). The main feature of GASAT is that it includes a recombination stage based on a specific crossover and a tabu search stage. We have conducted experiments to evaluate the different components of GASAT and to compare its overall performance with state-of-the-art SAT algorithms. These experiments show that GASAT provides very competitive results. PMID:16831107
Genetic programming based ensemble system for microarray data classification.
Liu, Kun-Hong; Tong, Muchenxuan; Xie, Shu-Tong; Yee Ng, Vincent To
2015-01-01
Recently, more and more machine learning techniques have been applied to microarray data analysis. The aim of this study is to propose a genetic programming (GP) based new ensemble system (named GPES), which can be used to effectively classify different types of cancers. Decision trees are deployed as base classifiers in this ensemble framework with three operators: Min, Max, and Average. Each individual of the GP is an ensemble system, and they become more and more accurate in the evolutionary process. The feature selection technique and balanced subsampling technique are applied to increase the diversity in each ensemble system. The final ensemble committee is selected by a forward search algorithm, which is shown to be capable of fitting data automatically. The performance of GPES is evaluated using five binary class and six multiclass microarray datasets, and results show that the algorithm can achieve better results in most cases compared with some other ensemble systems. By using elaborate base classifiers or applying other sampling techniques, the performance of GPES may be further improved. PMID:25810748
Nonlinear inversion of potential-field data using a hybrid-encoding genetic algorithm
Chen, C.; Xia, J.; Liu, J.; Feng, G.
2006-01-01
Using a genetic algorithm to solve an inverse problem of complex nonlinear geophysical equations is advantageous because it does not require computer gradients of models or "good" initial models. The multi-point search of a genetic algorithm makes it easier to find the globally optimal solution while avoiding falling into a local extremum. As is the case in other optimization approaches, the search efficiency for a genetic algorithm is vital in finding desired solutions successfully in a multi-dimensional model space. A binary-encoding genetic algorithm is hardly ever used to resolve an optimization problem such as a simple geophysical inversion with only three unknowns. The encoding mechanism, genetic operators, and population size of the genetic algorithm greatly affect search processes in the evolution. It is clear that improved operators and proper population size promote the convergence. Nevertheless, not all genetic operations perform perfectly while searching under either a uniform binary or a decimal encoding system. With the binary encoding mechanism, the crossover scheme may produce more new individuals than with the decimal encoding. On the other hand, the mutation scheme in a decimal encoding system will create new genes larger in scope than those in the binary encoding. This paper discusses approaches of exploiting the search potential of genetic operations in the two encoding systems and presents an approach with a hybrid-encoding mechanism, multi-point crossover, and dynamic population size for geophysical inversion. We present a method that is based on the routine in which the mutation operation is conducted in the decimal code and multi-point crossover operation in the binary code. The mix-encoding algorithm is called the hybrid-encoding genetic algorithm (HEGA). HEGA provides better genes with a higher probability by a mutation operator and improves genetic algorithms in resolving complicated geophysical inverse problems. Another significant
NASA Astrophysics Data System (ADS)
Ushijima, Timothy T.; Yeh, William W.-G.
2013-10-01
An optimal experimental design algorithm is developed to select locations for a network of observation wells that provide maximum information about unknown groundwater pumping in a confined, anisotropic aquifer. The design uses a maximal information criterion that chooses, among competing designs, the design that maximizes the sum of squared sensitivities while conforming to specified design constraints. The formulated optimization problem is non-convex and contains integer variables necessitating a combinatorial search. Given a realistic large-scale model, the size of the combinatorial search required can make the problem difficult, if not impossible, to solve using traditional mathematical programming techniques. Genetic algorithms (GAs) can be used to perform the global search; however, because a GA requires a large number of calls to a groundwater model, the formulated optimization problem still may be infeasible to solve. As a result, proper orthogonal decomposition (POD) is applied to the groundwater model to reduce its dimensionality. Then, the information matrix in the full model space can be searched without solving the full model. Results from a small-scale test case show identical optimal solutions among the GA, integer programming, and exhaustive search methods. This demonstrates the GA's ability to determine the optimal solution. In addition, the results show that a GA with POD model reduction is several orders of magnitude faster in finding the optimal solution than a GA using the full model. The proposed experimental design algorithm is applied to a realistic, two-dimensional, large-scale groundwater problem. The GA converged to a solution for this large-scale problem.
Optimization of simulation models with GADELO: a multi-population genetic algorithm.
Elketroussi, M; Fan, D P
1994-02-01
In this paper, a new Genetic Algorithm based on the Dynamic Exploration of Local Optima (GADELO) was used to estimate the parameters of the MRD (Micro-population model of Risk-group Dynamics) micro-population model for smoking cessation by minimizing a deviation function between the model's predictions and the smoking cessation data of the Multiple Risk Factor Intervention Trial (MRFIT). The efficiency and accuracy of the GADELO estimations were consistently superior to those obtained using the standard genetic algorithm or the simplex algorithm of Nelder-Mead. PMID:8175209
Constraint identification and algorithm stabilization for degenerate nonlinear programs.
Wright, S. J.; Mathematics and Computer Science
2003-01-01
In the vicinity of a solution of a nonlinear programming problem at which both strict complementarity and linear independence of the active constraints may fail to hold, we describe a technique for distinguishing weakly active from strongly active constraints. We show that this information can be used to modify the sequential quadratic programming algorithm so that it exhibits superlinear convergence to the solution under assumptions weaker than those made in previous analyses.
Comprehensive bidding strategies with genetic programming/finite state automata
Richter, C.W. Jr.; Sheble, G.B.; Ashlock, D.
1999-11-01
This research is an extension of the authors' previous work in double auctions aimed at developing bidding strategies for electric utilities which trade electricity competitively. The improvements detailed in this paper come from using data structures which combine genetic programming and finite state automata termed GP-Automata. The strategies developed by the method described here are adaptive--reacting to inputs--whereas the previously developed strategies were only suitable in the particular scenario for which they had been designed. The strategies encoded in the GP-Automata are tested in an auction simulator. The simulator pits them against other distribution companies (distcos) and generation companies (gencos), buying and selling power via double auctions implemented in regional commodity exchanges. The GP-Automata are evolved with a genetic algorithm so that they possess certain characteristics. In addition to designing successful bidding strategies (whose usage would result in higher profits) the resulting strategies can also be designed to imitate certain types of trading behaviors. The resulting strategies can be implemented directly in on-line trading, or can be used as realistic competitors in an off-line trading simulator.
NASA Astrophysics Data System (ADS)
Bigdeli, Kasra; Hare, Warren; Tesfamariam, Solomon
2012-04-01
Passive dampers can be used to connect two adjacent structures in order to mitigate earthquakes induced pounding damages. Theoretical and experimental studies have confirmed efficiency and applicability of various connecting devices, such as viscous damper, MR damper, etc. However, few papers employed optimization methods to find the optimal mechanical properties of the dampers, and in most papers, dampers are assumed to be uniform. In this study, we optimized the optimal damping coefficients of viscous dampers considering a general case of non-uniform damping coefficients. Since the derivatives of objective function to damping coefficients are not known, to optimize damping coefficients, a heuristic search method, i.e. the genetic algorithm, is employed. Each structure is modeled as a multi degree of freedom dynamic system consisting of lumped-masses, linear springs and dampers. In order to examine dynamic behavior of the structures, simulations in frequency domain are carried out. A pseudo-excitation based on Kanai-Tajimi spectrum is used as ground acceleration. The optimization results show that relaxing the uniform dampers coefficient assumption generates significant improvement in coupling effectiveness. To investigate efficiency of genetic algorithm, solution quality and solution time of genetic algorithm are compared with those of Nelder-Mead algorithm.
Phase Reconstruction from FROG Using Genetic Algorithms[Frequency-Resolved Optical Gating
Omenetto, F.G.; Nicholson, J.W.; Funk, D.J.; Taylor, A.J.
1999-04-12
The authors describe a new technique for obtaining the phase and electric field from FROG measurements using genetic algorithms. Frequency-Resolved Optical Gating (FROG) has gained prominence as a technique for characterizing ultrashort pulses. FROG consists of a spectrally resolved autocorrelation of the pulse to be measured. Typically a combination of iterative algorithms is used, applying constraints from experimental data, and alternating between the time and frequency domain, in order to retrieve an optical pulse. The authors have developed a new approach to retrieving the intensity and phase from FROG data using a genetic algorithm (GA). A GA is a general parallel search technique that operates on a population of potential solutions simultaneously. Operators in a genetic algorithm, such as crossover, selection, and mutation are based on ideas taken from evolution.
NASA Astrophysics Data System (ADS)
Sharifi, Mani; Rezaei Moayed, Reza; Haratizadeh, Sara
2011-09-01
This paper presents two models for redundancy allocation problem (RAP) with cold standby redundancy policy subject to weight and cost constraints. Also, each element of the system can be damaged exponentially. And, damaged elements can be repaired exponentially by hiring some repairmen. The problem is to determine: (1) element type used in the system, (2) number of elements, and (3) number of repairmen. As the models are not solvable by exact solution methods in reasonable CPU time, an efficient genetic algorithm is developed for it. The genetic algorithm (GA) is hybridized with a local search procedure. Also, the algorithm accepts infeasible solutions after penalizing them based on their amounts of infeasibilities. Thereby, by using these two features, an efficient genetic algorithm is obtained.
The convergence analysis of parallel genetic algorithm based on allied strategy
NASA Astrophysics Data System (ADS)
Lin, Feng; Sun, Wei; Chang, K. C.
2010-04-01
Genetic algorithms (GAs) have been applied to many difficult optimization problems such as track assignment and hypothesis managements for multisensor integration and data fusion. However, premature convergence has been a main problem for GAs. In order to prevent premature convergence, we introduce an allied strategy based on biological evolution and present a parallel Genetic Algorithm with the allied strategy (PGAAS). The PGAAS can prevent premature convergence, increase the optimization speed, and has been successfully applied in a few applications. In this paper, we first present a Markov chain model in the PGAAS. Based on this model, we analyze the convergence property of PGAAS. We then present the proof of global convergence for the PGAAS algorithm. The experiments results show that PGAAS is an efficient and effective parallel Genetic algorithm. Finally, we discuss several potential applications of the proposed methodology.
A Constrained Genetic Algorithm with Adaptively Defined Fitness Function in MRS Quantification
NASA Astrophysics Data System (ADS)
Papakostas, G. A.; Karras, D. A.; Mertzios, B. G.; Graveron-Demilly, D.; van Ormondt, D.
MRS Signal quantification is a rather involved procedure and has attracted the interest of the medical engineering community, regarding the development of computationally efficient methodologies. Significant contributions based on Computational Intelligence tools, such as Neural Networks (NNs), demonstrated a good performance but not without drawbacks already discussed by the authors. On the other hand preliminary application of Genetic Algorithms (GA) has already been reported in the literature by the authors regarding the peak detection problem encountered in MRS quantification using the Voigt line shape model. This paper investigates a novel constrained genetic algorithm involving a generic and adaptively defined fitness function which extends the simple genetic algorithm methodology in case of noisy signals. The applicability of this new algorithm is scrutinized through experimentation in artificial MRS signals interleaved with noise, regarding its signal fitting capabilities. Although extensive experiments with real world MRS signals are necessary, the herein shown performance illustrates the method's potential to be established as a generic MRS metabolites quantification procedure.
Alshamlan, Hala M; Badr, Ghada H; Alohali, Yousef A
2015-06-01
Naturally inspired evolutionary algorithms prove effectiveness when used for solving feature selection and classification problems. Artificial Bee Colony (ABC) is a relatively new swarm intelligence method. In this paper, we propose a new hybrid gene selection method, namely Genetic Bee Colony (GBC) algorithm. The proposed algorithm combines the used of a Genetic Algorithm (GA) along with Artificial Bee Colony (ABC) algorithm. The goal is to integrate the advantages of both algorithms. The proposed algorithm is applied to a microarray gene expression profile in order to select the most predictive and informative genes for cancer classification. In order to test the accuracy performance of the proposed algorithm, extensive experiments were conducted. Three binary microarray datasets are use, which include: colon, leukemia, and lung. In addition, another three multi-class microarray datasets are used, which are: SRBCT, lymphoma, and leukemia. Results of the GBC algorithm are compared with our recently proposed technique: mRMR when combined with the Artificial Bee Colony algorithm (mRMR-ABC). We also compared the combination of mRMR with GA (mRMR-GA) and Particle Swarm Optimization (mRMR-PSO) algorithms. In addition, we compared the GBC algorithm with other related algorithms that have been recently published in the literature, using all benchmark datasets. The GBC algorithm shows superior performance as it achieved the highest classification accuracy along with the lowest average number of selected genes. This proves that the GBC algorithm is a promising approach for solving the gene selection problem in both binary and multi-class cancer classification. PMID:25880524
Developing robotic behavior using a genetic programming model
Pryor, R.J.
1998-01-01
This report describes the methodology for using a genetic programming model to develop tracking behaviors for autonomous, microscale robotic vehicles. The use of such vehicles for surveillance and detection operations has become increasingly important in defense and humanitarian applications. Through an evolutionary process similar to that found in nature, the genetic programming model generates a computer program that when downloaded onto a robotic vehicle`s on-board computer will guide the robot to successfully accomplish its task. Simulations of multiple robots engaged in problem-solving tasks have demonstrated cooperative behaviors. This report also discusses the behavior model produced by genetic programming and presents some results achieved during the study.
Martins, F V C; Carrano, E G; Wanner, E F; Takahashi, R H C; Mateus, G R; Nakamura, F G
2014-01-01
Recent works raised the hypothesis that the assignment of a geometry to the decision variable space of a combinatorial problem could be useful both for providing meaningful descriptions of the fitness landscape and for supporting the systematic construction of evolutionary operators (the geometric operators) that make a consistent usage of the space geometric properties in the search for problem optima. This paper introduces some new geometric operators that constitute the realization of searches along the combinatorial space versions of the geometric entities descent directions and subspaces. The new geometric operators are stated in the specific context of the wireless sensor network dynamic coverage and connectivity problem (WSN-DCCP). A genetic algorithm (GA) is developed for the WSN-DCCP using the proposed operators, being compared with a formulation based on integer linear programming (ILP) which is solved with exact methods. That ILP formulation adopts a proxy objective function based on the minimization of energy consumption in the network, in order to approximate the objective of network lifetime maximization, and a greedy approach for dealing with the system's dynamics. To the authors' knowledge, the proposed GA is the first algorithm to outperform the lifetime of networks as synthesized by the ILP formulation, also running in much smaller computational times for large instances. PMID:24102647
Reveal, A General Reverse Engineering Algorithm for Inference of Genetic Network Architectures
NASA Technical Reports Server (NTRS)
Liang, Shoudan; Fuhrman, Stefanie; Somogyi, Roland
1998-01-01
Given the immanent gene expression mapping covering whole genomes during development, health and disease, we seek computational methods to maximize functional inference from such large data sets. Is it possible, in principle, to completely infer a complex regulatory network architecture from input/output patterns of its variables? We investigated this possibility using binary models of genetic networks. Trajectories, or state transition tables of Boolean nets, resemble time series of gene expression. By systematically analyzing the mutual information between input states and output states, one is able to infer the sets of input elements controlling each element or gene in the network. This process is unequivocal and exact for complete state transition tables. We implemented this REVerse Engineering ALgorithm (REVEAL) in a C program, and found the problem to be tractable within the conditions tested so far. For n = 50 (elements) and k = 3 (inputs per element), the analysis of incomplete state transition tables (100 state transition pairs out of a possible 10(exp 15)) reliably produced the original rule and wiring sets. While this study is limited to synchronous Boolean networks, the algorithm is generalizable to include multi-state models, essentially allowing direct application to realistic biological data sets. The ability to adequately solve the inverse problem may enable in-depth analysis of complex dynamic systems in biology and other fields.
A Genetic Algorithm Approach to Nonlinear Least Squares Estimation
ERIC Educational Resources Information Center
Olinsky, Alan D.; Quinn, John T.; Mangiameli, Paul M.; Chen, Shaw K.
2004-01-01
A common type of problem encountered in mathematics is optimizing nonlinear functions. Many popular algorithms that are currently available for finding nonlinear least squares estimators, a special class of nonlinear problems, are sometimes inadequate. They might not converge to an optimal value, or if they do, it could be to a local rather than…
Genetic algorithms and their applications in accelerator physics
Hofler, Alicia S.
2013-12-01
Multi-objective optimization techniques are widely used in an extremely broad range of fields. Genetic optimization for multi-objective optimization was introduced in the accelerator community in relatively recent times and quickly spread becoming a fundamental tool in multi-dimensional optimization problems. This discussion introduces the basics of the technique and reviews applications in accelerator problems.
Experimental Performance of a Genetic Algorithm for Airborne Strategic Conflict Resolution
NASA Technical Reports Server (NTRS)
Karr, David A.; Vivona, Robert A.; Roscoe, David A.; DePascale, Stephen M.; Consiglio, Maria
2009-01-01
The Autonomous Operations Planner, a research prototype flight-deck decision support tool to enable airborne self-separation, uses a pattern-based genetic algorithm to resolve predicted conflicts between the ownship and traffic aircraft. Conflicts are resolved by modifying the active route within the ownship s flight management system according to a predefined set of maneuver pattern templates. The performance of this pattern-based genetic algorithm was evaluated in the context of batch-mode Monte Carlo simulations running over 3600 flight hours of autonomous aircraft in en-route airspace under conditions ranging from typical current traffic densities to several times that level. Encountering over 8900 conflicts during two simulation experiments, the genetic algorithm was able to resolve all but three conflicts, while maintaining a required time of arrival constraint for most aircraft. Actual elapsed running time for the algorithm was consistent with conflict resolution in real time. The paper presents details of the genetic algorithm s design, along with mathematical models of the algorithm s performance and observations regarding the effectiveness of using complimentary maneuver patterns when multiple resolutions by the same aircraft were required.
Experimental Performance of a Genetic Algorithm for Airborne Strategic Conflict Resolution
NASA Technical Reports Server (NTRS)
Karr, David A.; Vivona, Robert A.; Roscoe, David A.; DePascale, Stephen M.; Consiglio, Maria
2009-01-01
The Autonomous Operations Planner, a research prototype flight-deck decision support tool to enable airborne self-separation, uses a pattern-based genetic algorithm to resolve predicted conflicts between the ownship and traffic aircraft. Conflicts are resolved by modifying the active route within the ownship's flight management system according to a predefined set of maneuver pattern templates. The performance of this pattern-based genetic algorithm was evaluated in the context of batch-mode Monte Carlo simulations running over 3600 flight hours of autonomous aircraft in en-route airspace under conditions ranging from typical current traffic densities to several times that level. Encountering over 8900 conflicts during two simulation experiments, the genetic algorithm was able to resolve all but three conflicts, while maintaining a required time of arrival constraint for most aircraft. Actual elapsed running time for the algorithm was consistent with conflict resolution in real time. The paper presents details of the genetic algorithm's design, along with mathematical models of the algorithm's performance and observations regarding the effectiveness of using complimentary maneuver patterns when multiple resolutions by the same aircraft were required.
Co-evolution of Hetero Multiagent Systems using Genetic Network Programming
NASA Astrophysics Data System (ADS)
Hirasawa, Kotaro; Okubo, Masafumi; Hu, Jinglu; Murata, Junichi; Matsuya, Yuko
Recently, many methods of evolutionary computation such as Genetic Algorithm(GA) and Genetic Programming(GP) have been developed as a basic tool for modeling and optimizing complex systems. GA has the genome of string structure, while the genome in GP is of tree structure. In this paper, a new evolutionary method named Genetic Network Programming(GNP), whose genome has network structure is applied to multiagent sysytems. Hetero Multiagent Sysytems with GNP are studied, where each agent of the same group has its own GNP program in order to build the adaptive agents against changing environments. Specifically, the comparison between Hetero Multiagent Systems and conventional Homo Multiagent Sysytems is carried out in simulations on ants behaviors.
A genetic programming approach for time-series analysis and prediction in space physics.
NASA Astrophysics Data System (ADS)
Jorgensen, A. M.; Brumby, S. P.; Henderson, M. G.
2004-12-01
A central theme in space weather prediction is the ability to predict time-series of relevant quantities, both empirically, and from physics-based models. Empirical models are often based on educated guesses, or intuition. The task of finding an empirical relationship relating quantities can be tedious and time-consuming, especially when a large number of parameters are involved. Genetic Programming (GP) provides a method for automating the guesswork, and can in some instances automatically find functional relationships between data streams. GP is an evolutionary computation technique which is an extension of the Genetic Algorithm framework used for function optimization. In GP an evolutionary algorithm combines elementary function operators in an attempt to build a function which is able to reproduce a training example from a set of input data. We will illustrate how a GP algorithm can be used in space physics by addressing two relevant topics: The prediction of relativistic electron fluxes, and prediction of Dst.
A High-Performance Genetic Algorithm: Using Traveling Salesman Problem as a Case
Tsai, Chun-Wei; Tseng, Shih-Pang; Yang, Chu-Sing
2014-01-01
This paper presents a simple but efficient algorithm for reducing the computation time of genetic algorithm (GA) and its variants. The proposed algorithm is motivated by the observation that genes common to all the individuals of a GA have a high probability of surviving the evolution and ending up being part of the final solution; as such, they can be saved away to eliminate the redundant computations at the later generations of a GA. To evaluate the performance of the proposed algorithm, we use it not only to solve the traveling salesman problem but also to provide an extensive analysis on the impact it may have on the quality of the end result. Our experimental results indicate that the proposed algorithm can significantly reduce the computation time of GA and GA-based algorithms while limiting the degradation of the quality of the end result to a very small percentage compared to traditional GA. PMID:24892038
Abejuela, Harmony Raylen; Osser, David N
2016-01-01
This revision of previous algorithms for the pharmacotherapy of generalized anxiety disorder was developed by the Psychopharmacology Algorithm Project at the Harvard South Shore Program. Algorithms from 1999 and 2010 and associated references were reevaluated. Newer studies and reviews published from 2008-14 were obtained from PubMed and analyzed with a focus on their potential to justify changes in the recommendations. Exceptions to the main algorithm for special patient populations, such as women of childbearing potential, pregnant women, the elderly, and those with common medical and psychiatric comorbidities, were considered. Selective serotonin reuptake inhibitors (SSRIs) are still the basic first-line medication. Early alternatives include duloxetine, buspirone, hydroxyzine, pregabalin, or bupropion, in that order. If response is inadequate, then the second recommendation is to try a different SSRI. Additional alternatives now include benzodiazepines, venlafaxine, kava, and agomelatine. If the response to the second SSRI is unsatisfactory, then the recommendation is to try a serotonin-norepinephrine reuptake inhibitor (SNRI). Other alternatives to SSRIs and SNRIs for treatment-resistant or treatment-intolerant patients include tricyclic antidepressants, second-generation antipsychotics, and valproate. This revision of the GAD algorithm responds to issues raised by new treatments under development (such as pregabalin) and organizes the evidence systematically for practical clinical application. PMID:27384395
A High Fuel Consumption Efficiency Management Scheme for PHEVs Using an Adaptive Genetic Algorithm
Lee, Wah Ching; Tsang, Kim Fung; Chi, Hao Ran; Hung, Faan Hei; Wu, Chung Kit; Chui, Kwok Tai; Lau, Wing Hong; Leung, Yat Wah
2015-01-01
A high fuel efficiency management scheme for plug-in hybrid electric vehicles (PHEVs) has been developed. In order to achieve fuel consumption reduction, an adaptive genetic algorithm scheme has been designed to adaptively manage the energy resource usage. The objective function of the genetic algorithm is implemented by designing a fuzzy logic controller which closely monitors and resembles the driving conditions and environment of PHEVs, thus trading off between petrol versus electricity for optimal driving efficiency. Comparison between calculated results and publicized data shows that the achieved efficiency of the fuzzified genetic algorithm is better by 10% than existing schemes. The developed scheme, if fully adopted, would help reduce over 600 tons of CO2 emissions worldwide every day. PMID:25587974
Song, Jiancai; Xue, Guixiang; Kang, Yanan
2016-01-01
In this paper, a novel method for selecting a navigation satellite subset for a global positioning system (GPS) based on a genetic algorithm is presented. This approach is based on minimizing the factors in the geometric dilution of precision (GDOP) using a modified genetic algorithm (MGA) with an elite conservation strategy, adaptive selection, adaptive mutation, and a hybrid genetic algorithm that can select a subset of the satellites represented by specific numbers in the interval (4 ∼ n) while maintaining position accuracy. A comprehensive simulation demonstrates that the MGA-based satellite selection method effectively selects the correct number of optimal satellite subsets using receiver autonomous integrity monitoring (RAIM) or fault detection and exclusion (FDE). This method is more adaptable and flexible for GPS receivers, particularly for those used in handset equipment and mobile phones. PMID:26943638
A high fuel consumption efficiency management scheme for PHEVs using an adaptive genetic algorithm.
Lee, Wah Ching; Tsang, Kim Fung; Chi, Hao Ran; Hung, Faan Hei; Wu, Chung Kit; Chui, Kwok Tai; Lau, Wing Hong; Leung, Yat Wah
2015-01-01
A high fuel efficiency management scheme for plug-in hybrid electric vehicles (PHEVs) has been developed. In order to achieve fuel consumption reduction, an adaptive genetic algorithm scheme has been designed to adaptively manage the energy resource usage. The objective function of the genetic algorithm is implemented by designing a fuzzy logic controller which closely monitors and resembles the driving conditions and environment of PHEVs, thus trading off between petrol versus electricity for optimal driving efficiency. Comparison between calculated results and publicized data shows that the achieved efficiency of the fuzzified genetic algorithm is better by 10% than existing schemes. The developed scheme, if fully adopted, would help reduce over 600 tons of CO2 emissions worldwide every day. PMID:25587974
Song, Jiancai; Xue, Guixiang; Kang, Yanan
2016-01-01
In this paper, a novel method for selecting a navigation satellite subset for a global positioning system (GPS) based on a genetic algorithm is presented. This approach is based on minimizing the factors in the geometric dilution of precision (GDOP) using a modified genetic algorithm (MGA) with an elite conservation strategy, adaptive selection, adaptive mutation, and a hybrid genetic algorithm that can select a subset of the satellites represented by specific numbers in the interval (4 ∼ n) while maintaining position accuracy. A comprehensive simulation demonstrates that the MGA-based satellite selection method effectively selects the correct number of optimal satellite subsets using receiver autonomous integrity monitoring (RAIM) or fault detection and exclusion (FDE). This method is more adaptable and flexible for GPS receivers, particularly for those used in handset equipment and mobile phones. PMID:26943638
NASA Astrophysics Data System (ADS)
Braiek, A.; Adili, A.; Albouchi, F.; Karkri, M.; Ben Nasrallah, S.
2016-06-01
The aim of this work is to simultaneously identify the conductive and radiative parameters of a semitransparent sample using a photothermal method associated with an inverse problem. The identification of the conductive and radiative proprieties is performed by the minimization of an objective function that represents the errors between calculated temperature and measured signal. The calculated temperature is obtained from a theoretical model built with the thermal quadrupole formalism. Measurement is obtained in the rear face of the sample whose front face is excited by a crenel of heat flux. For identification procedure, a genetic algorithm is developed and used. The genetic algorithm is a useful tool in the simultaneous estimation of correlated or nearly correlated parameters, which can be a limiting factor for the gradient-based methods. The results of the identification procedure show the efficiency and the stability of the genetic algorithm to simultaneously estimate the conductive and radiative properties of clear glass.
Learning to play like a human: case injected genetic algorithms for strategic computer gaming
NASA Astrophysics Data System (ADS)
Louis, Sushil J.; Miles, Chris
2006-05-01
We use case injected genetic algorithms to learn how to competently play computer strategy games that involve long range planning across complex dynamics. Imperfect knowledge presented to players requires them adapt their strategies in order to anticipate opponent moves. We focus on the problem of acquiring knowledge learned from human players, in particular we learn general routing information from a human player in the context of a strike force planning game. By incorporating case injection into a genetic algorithm, we show methods for incorporating general knowledge elicited from human players into future plans. In effect allowing the GA to take important strategic elements from human play and merging those elements into its own strategic thinking. Results show that with an appropriate representation, case injection is effective at biasing the genetic algorithm toward producing plans that contain important strategic elements used by human players.
A Hybrid Neural Network-Genetic Algorithm Technique for Aircraft Engine Performance Diagnostics
NASA Technical Reports Server (NTRS)
Kobayashi, Takahisa; Simon, Donald L.
2001-01-01
In this paper, a model-based diagnostic method, which utilizes Neural Networks and Genetic Algorithms, is investigated. Neural networks are applied to estimate the engine internal health, and Genetic Algorithms are applied for sensor bias detection and estimation. This hybrid approach takes advantage of the nonlinear estimation capability provided by neural networks while improving the robustness to measurement uncertainty through the application of Genetic Algorithms. The hybrid diagnostic technique also has the ability to rank multiple potential solutions for a given set of anomalous sensor measurements in order to reduce false alarms and missed detections. The performance of the hybrid diagnostic technique is evaluated through some case studies derived from a turbofan engine simulation. The results show this approach is promising for reliable diagnostics of aircraft engines.
A multiobjective optimization algorithm is applied to a groundwater quality management problem involving remediation by pump-and-treat (PAT). The multiobjective optimization framework uses the niched Pareto genetic algorithm (NPGA) and is applied to simultaneously minimize the...
Using genetic algorithm to solve a new multi-period stochastic optimization model
NASA Astrophysics Data System (ADS)
Zhang, Xin-Li; Zhang, Ke-Cun
2009-09-01
This paper presents a new asset allocation model based on the CVaR risk measure and transaction costs. Institutional investors manage their strategic asset mix over time to achieve favorable returns subject to various uncertainties, policy and legal constraints, and other requirements. One may use a multi-period portfolio optimization model in order to determine an optimal asset mix. Recently, an alternative stochastic programming model with simulated paths was proposed by Hibiki [N. Hibiki, A hybrid simulation/tree multi-period stochastic programming model for optimal asset allocation, in: H. Takahashi, (Ed.) The Japanese Association of Financial Econometrics and Engineering, JAFFE Journal (2001) 89-119 (in Japanese); N. Hibiki A hybrid simulation/tree stochastic optimization model for dynamic asset allocation, in: B. Scherer (Ed.), Asset and Liability Management Tools: A Handbook for Best Practice, Risk Books, 2003, pp. 269-294], which was called a hybrid model. However, the transaction costs weren't considered in that paper. In this paper, we improve Hibiki's model in the following aspects: (1) The risk measure CVaR is introduced to control the wealth loss risk while maximizing the expected utility; (2) Typical market imperfections such as short sale constraints, proportional transaction costs are considered simultaneously. (3) Applying a genetic algorithm to solve the resulting model is discussed in detail. Numerical results show the suitability and feasibility of our methodology.
Genetic algorithms for optimal reactive power compensation planning on the national grid system
NASA Astrophysics Data System (ADS)
Pilgrim, J. D.
This work investigates the use of Genetic Algorithms (GAs) for optimal Reactive power Compensation Planning (RCP) of practical power systems. In particular, RCP of the transmission system of England and Wales as owned and operated by National Grid is considered. The GA is used to simultaneously solve both the siting problem---optimisation of the installation of new devices---and the operational problem---optimisation of preventive transformer taps and the controller characteristics of dynamic compensation devices. A computer package called Genetic Compensation Placement (GCP) has been developed which uses an Integer coded GA (IGA) to solve the RCP problem. The RCP problem is implemented as a multi-objective optimisation: in the interests of security, the number of system and operational constraint violations and the deviation of the busbar voltages from the ideal are all minimised for the base (intact) case and the contingent cases. In the interests of cost reduction, the reactive power cost is minimised for the base case. The reactive power cost encompasses the costs incurred from the installation of reactive power sources and the utilisation of new and existing dynamic reactive power compensation devices. GCP is compared to SCORPION (a planning program currently being used by National Grid) which uses a combination of linear programming and heuristic back-tracking. Results are presented for a practical test system developed with the cooperation of National Grid, and it is found that GCP produces solutions that are cheaper than solutions found by SCORPION and perform extremely well: an improvement in voltage profiles, a decrease in complex power mismatches, and a reduction in MVolt Amps-reactive (VAr) utilisation were observed.
Xu, Sheng-Hua; Liu, Ji-Ping; Zhang, Fu-Hao; Wang, Liang; Sun, Li-Jian
2015-01-01
A combination of genetic algorithm and particle swarm optimization (PSO) for vehicle routing problems with time windows (VRPTW) is proposed in this paper. The improvements of the proposed algorithm include: using the particle real number encoding method to decode the route to alleviate the computation burden, applying a linear decreasing function based on the number of the iterations to provide balance between global and local exploration abilities, and integrating with the crossover operator of genetic algorithm to avoid the premature convergence and the local minimum. The experimental results show that the proposed algorithm is not only more efficient and competitive with other published results but can also obtain more optimal solutions for solving the VRPTW issue. One new well-known solution for this benchmark problem is also outlined in the following. PMID:26343655
Genetic Algorithm to minimize flowtime in a no-wait flowshop scheduling problem
NASA Astrophysics Data System (ADS)
Chaudhry, Imran A.; Ahmed, Riaz; Munem Khan, Abdul
2014-07-01
No-wait flowshop is an important scheduling environment having application in many industries. This paper addresses a no-wait flowshop scheduling problem, where the objective function is to minimise total flowtime. A Genetic Algorithm (GA) optimization approach implemented in a spreadsheet environment is suggested to solve this important class of problem. The proposed algorithm employs a general purpose genetic algorithm which can be customised with ease to address any objective function without modifying the optimization routine. Performance of the proposed approach is compared with eight previously reported algorithms for two sets of benchmark problems. Experimental analysis shows that the performance of the suggested approach is comparable with earlier approaches in terms of quality of solution.
Zhang Changjiang; Wang Xiaodong
2008-11-06
An efficient typhoon cloud image restoration algorithm is proposed. Having implemented contourlet transform to a typhoon cloud image, noise is reduced in the high sub-bands. Weight median value filter is used to reduce the noise in the contourlet domain. Inverse contourlet transform is done to obtain the de-noising image. In order to enhance the global contrast of the typhoon cloud image, in-complete Beta transform (IBT) is used to determine non-linear gray transform curve so as to enhance global contrast for the de-noising typhoon cloud image. Genetic algorithm is used to obtain the optimal gray transform curve. Information entropy is used as the fitness function of the genetic algorithm. Experimental results show that the new algorithm is able to well enhance the global for the typhoon cloud image while well reducing the noises in the typhoon cloud image.
Xu, Sheng-Hua; Liu, Ji-Ping; Zhang, Fu-Hao; Wang, Liang; Sun, Li-Jian
2015-01-01
A combination of genetic algorithm and particle swarm optimization (PSO) for vehicle routing problems with time windows (VRPTW) is proposed in this paper. The improvements of the proposed algorithm include: using the particle real number encoding method to decode the route to alleviate the computation burden, applying a linear decreasing function based on the number of the iterations to provide balance between global and local exploration abilities, and integrating with the crossover operator of genetic algorithm to avoid the premature convergence and the local minimum. The experimental results show that the proposed algorithm is not only more efficient and competitive with other published results but can also obtain more optimal solutions for solving the VRPTW issue. One new well-known solution for this benchmark problem is also outlined in the following. PMID:26343655
A Genetic Algorithm and Fuzzy Logic Approach for Video Shot Boundary Detection
Thounaojam, Dalton Meitei; Khelchandra, Thongam; Singh, Kh. Manglem; Roy, Sudipta
2016-01-01
This paper proposed a shot boundary detection approach using Genetic Algorithm and Fuzzy Logic. In this, the membership functions of the fuzzy system are calculated using Genetic Algorithm by taking preobserved actual values for shot boundaries. The classification of the types of shot transitions is done by the fuzzy system. Experimental results show that the accuracy of the shot boundary detection increases with the increase in iterations or generations of the GA optimization process. The proposed system is compared to latest techniques and yields better result in terms of F1score parameter. PMID:27127500
Neural network and genetic algorithm technology in data mining of manufacturing quality information
NASA Astrophysics Data System (ADS)
Song, Limei; Qu, Xing-Hua; Ye, Shenghua
2002-03-01
Data Mining of Manufacturing Quality Information (MQI) is the key technology in Quality Lead Control. Of all the data mining methods, Neural Network and Genetic Algorithm is widely used for their strong advantages, such as non-linear, collateral, veracity etc. But if you singly use them, there will be some limitations preventing your research, such as convergence slowly, searching blindness etc. This paper combines their merits and use Genetic BP Algorithm in Data Mining of MQI. It has been successfully used in the key project of Natural Science Foundation of China (NSFC) - Quality Control and Zero-defect Engineering (Project No. 59735120).
An Efficient Functional Test Generation Method For Processors Using Genetic Algorithms
NASA Astrophysics Data System (ADS)
Hudec, Ján; Gramatová, Elena
2015-07-01
The paper presents a new functional test generation method for processors testing based on genetic algorithms and evolutionary strategies. The tests are generated over an instruction set architecture and a processor description. Such functional tests belong to the software-oriented testing. Quality of the tests is evaluated by code coverage of the processor description using simulation. The presented test generation method uses VHDL models of processors and the professional simulator ModelSim. The rules, parameters and fitness functions were defined for various genetic algorithms used in automatic test generation. Functionality and effectiveness were evaluated using the RISC type processor DP32.
A Genetic Algorithm and Fuzzy Logic Approach for Video Shot Boundary Detection.
Thounaojam, Dalton Meitei; Khelchandra, Thongam; Manglem Singh, Kh; Roy, Sudipta
2016-01-01
This paper proposed a shot boundary detection approach using Genetic Algorithm and Fuzzy Logic. In this, the membership functions of the fuzzy system are calculated using Genetic Algorithm by taking preobserved actual values for shot boundaries. The classification of the types of shot transitions is done by the fuzzy system. Experimental results show that the accuracy of the shot boundary detection increases with the increase in iterations or generations of the GA optimization process. The proposed system is compared to latest techniques and yields better result in terms of F1score parameter. PMID:27127500
Simultaneous optimization of the cavity heat load and trip rates in linacs using a genetic algorithm
NASA Astrophysics Data System (ADS)
Terzić, Balša; Hofler, Alicia S.; Reeves, Cody J.; Khan, Sabbir A.; Krafft, Geoffrey A.; Benesch, Jay; Freyberger, Arne; Ranjan, Desh
2014-10-01
In this paper, a genetic algorithm-based optimization is used to simultaneously minimize two competing objectives guiding the operation of the Jefferson Lab's Continuous Electron Beam Accelerator Facility linacs: cavity heat load and radio frequency cavity trip rates. The results represent a significant improvement to the standard linac energy management tool and thereby could lead to a more efficient Continuous Electron Beam Accelerator Facility configuration. This study also serves as a proof of principle of how a genetic algorithm can be used for optimizing other linac-based machines.
Optimal placement of tuning masses on truss structures by genetic algorithms
NASA Technical Reports Server (NTRS)
Ponslet, Eric; Haftka, Raphael T.; Cudney, Harley H.
1993-01-01
Optimal placement of tuning masses, actuators and other peripherals on large space structures is a combinatorial optimization problem. This paper surveys several techniques for solving this problem. The genetic algorithm approach to the solution of the placement problem is described in detail. An example of minimizing the difference between the two lowest frequencies of a laboratory truss by adding tuning masses is used for demonstrating some of the advantages of genetic algorithms. The relative efficiencies of different codings are compared using the results of a large number of optimization runs.
Digit and command interpretation for electronic book using neural network and genetic algorithm.
Lam, H K; Leung, Frank H F
2004-12-01
This paper presents the interpretation of digits and commands using a modified neural network and the genetic algorithm. The modified neural network exhibits a node-to-node relationship which enhances its learning and generalization abilities. A digit-and-command interpreter constructed by the modified neural networks is proposed to recognize handwritten digits and commands. A genetic algorithm is employed to train the parameters of the modified neural networks of the digit-and-command interpreter. The proposed digit-and-command interpreter is successfully realized in an electronic book. Simulation and experimental results will be presented to show the applicability and merits of the proposed approach. PMID:15619928
NASA Astrophysics Data System (ADS)
Gallagher, Kerry; Sambridge, Malcolm; Drijkoningen, Guy
In providing a method for solving non-linear optimization problems Monte Carlo techniques avoid the need for linearization but, in practice, are often prohibitive because of the large number of models that must be considered. A new class of methods known as Genetic Algorithms have recently been devised in the field of Artificial Intelligence. We outline the basic concept of genetic algorithms and discuss three examples. We show that, in locating an optimal model, the new technique is far superior in performance to Monte Carlo techniques in all cases considered. However, Monte Carlo integration is still regarded as an effective method for the subsequent model appraisal.
Chaotic queue-based genetic algorithm for design of a self-tuning fuzzy logic controller
NASA Astrophysics Data System (ADS)
Saini, Sanju; Saini, J. S.
2012-11-01
This paper employs a chaotic queue-based method using logistic equation in a non-canonical genetic algorithm for optimizing the performance of a self-tuning Fuzzy Logic Controller, used for controlling a nonlinear double-coupled system. A comparison has been made with a standard canonical genetic algorithm implemented on the same plant. It has been shown that chaotic queue-method brings an improvement in the performance of the FLC for wide range of set point changes by a more profound initial population spread in the search space.
Thomas, Clayton L.; Lee, Shaun W.
2015-01-01
Mucopolysaccharidosis type IIIA (MPS-IIIA, Sanfilippo syndrome) is a Lysosomal Storage Disease caused by cellular deficiency of N-sulfoglucosamine sulfohydrolase (SGSH). Given the large heterogeneity of genetic mutations responsible for the disease, a comprehensive understanding of the mechanisms by which these mutations affect enzyme function is needed to guide effective therapies. We developed a multiparametric computational algorithm to assess how patient genetic mutations in SGSH affect overall enzyme biogenesis, stability, and function. 107 patient mutations for the SGSH gene were obtained from the Human Gene Mutation Database representing all of the clinical mutations documented for Sanfilippo syndrome. We assessed each mutation individually using ten distinct parameters to give a comprehensive predictive score of the stability and misfolding capacity of the SGSH enzyme resulting from each of these mutations. The predictive score generated by our multiparametric algorithm yielded a standardized quantitative assessment of the severity of a given SGSH genetic mutation toward overall enzyme activity. Application of our algorithm has identified SGSH mutations in which enzymatic malfunction of the gene product is specifically due to impairments in protein folding. These scores provide an assessment of the degree to which a particular mutation could be treated using approaches such as chaperone therapies. Our multiparametric protein biogenesis algorithm advances a key understanding in the overall biochemical mechanism underlying Sanfilippo syndrome. Importantly, the design of our multiparametric algorithm can be tailored to many other diseases of genetic heterogeneity for which protein misfolding phenotypes may constitute a major component of disease manifestation. PMID:25807448
Orozco-Monteagudo, Maykel; Taboada-Crispi, Alberto; Gutierrez-Hernandez, Liliana
2008-11-06
This paper deals with the controversial topic of the selection of the parameters of a genetic algorithm, in this case hierarchical, used for training of multilayer perceptron neural networks for the binary classification. The parameters to select are the crossover and mutation probabilities of the control and parametric genes and the permanency percent. The results can be considered as a guide for using this kind of algorithm.
Hybrid Genetic Algorithm - Local Search Method for Ground-Water Management
NASA Astrophysics Data System (ADS)
Chiu, Y.; Nishikawa, T.; Martin, P.
2008-12-01
Ground-water management problems commonly are formulated as a mixed-integer, non-linear programming problem (MINLP). Relying only on conventional gradient-search methods to solve the management problem is computationally fast; however, the methods may become trapped in a local optimum. Global-optimization schemes can identify the global optimum, but the convergence is very slow when the optimal solution approaches the global optimum. In this study, we developed a hybrid optimization scheme, which includes a genetic algorithm and a gradient-search method, to solve the MINLP. The genetic algorithm identifies a near- optimal solution, and the gradient search uses the near optimum to identify the global optimum. Our methodology is applied to a conjunctive-use project in the Warren ground-water basin, California. Hi- Desert Water District (HDWD), the primary water-manager in the basin, plans to construct a wastewater treatment plant to reduce future septic-tank effluent from reaching the ground-water system. The treated wastewater instead will recharge the ground-water basin via percolation ponds as part of a larger conjunctive-use strategy, subject to State regulations (e.g. minimum distances and travel times). HDWD wishes to identify the least-cost conjunctive-use strategies that control ground-water levels, meet regulations, and identify new production-well locations. As formulated, the MINLP objective is to minimize water-delivery costs subject to constraints including pump capacities, available recharge water, water-supply demand, water-level constraints, and potential new-well locations. The methodology was demonstrated by an enumerative search of the entire feasible solution and comparing the optimum solution with results from the branch-and-bound algorithm. The results also indicate that the hybrid method identifies the global optimum within an affordable computation time. Sensitivity analyses, which include testing different recharge-rate scenarios, pond
Automated docking of peptides and proteins by using a genetic algorithm combined with a tabu search.
Hou, T; Wang, J; Chen, L; Xu, X
1999-08-01
A genetic algorithm (GA) combined with a tabu search (TA) has been applied as a minimization method to rake the appropriate associated sites for some biomolecular systems. In our docking procedure, surface complementarity and energetic complementarity of a ligand with its receptor have been considered separately in a two-stage docking method. The first stage was to find a set of potential associated sites mainly based on surface complementarity using a genetic algorithm combined with a tabu search. This step corresponds with the process of finding the potential binding sites where pharmacophores will bind. In the second stage, several hundreds of GA minimization steps were performed for each associated site derived from the first stage mainly based on the energetic complementarity. After calculations for both of the two stages, we can offer several solutions of associated sites for every complex. In this paper, seven biomolecular systems, including five bound complexes and two unbound complexes, were chosen from the Protein Data Bank (PDB) to test our method. The calculated results were very encouraging-the hybrid minimization algorithm successfully reaches the correct solutions near the best binded modes for these protein complexes. The docking results not only predict the bound complexes very well, but also get a relatively accurate complexed conformation for unbound systems. For the five bound complexes, the results show that surface complementarity is enough to find the precise binding modes, the top solution from the tabu list generally corresponds to the correct binding mode. For the two unbound complexes, due to the conformational changes upon binding, it seems more difficult to get their correct binding conformations. The predicted results show that the correct binding mode also corresponds to a relatively large surface complementarity score. In these two test cases, the correct solution can be found in the top several solutions from the tabu list. For
Research on Formation of Microsatellite Communication with Genetic Algorithm
Wu, Guoqiang; Bai, Yuguang; Sun, Zhaowei
2013-01-01
For the formation of three microsatellites which fly in the same orbit and perform three-dimensional solid mapping for terra, this paper proposes an optimizing design method of space circular formation order based on improved generic algorithm and provides an intersatellite direct spread spectrum communication system. The calculating equation of LEO formation flying satellite intersatellite links is guided by the special requirements of formation-flying microsatellite intersatellite links, and the transmitter power is also confirmed throughout the simulation. The method of space circular formation order optimizing design based on improved generic algorithm is given, and it can keep formation order steady for a long time under various absorb impetus. The intersatellite direct spread spectrum communication system is also provided. It can be found that, when the distance is 1 km and the data rate is 1 Mbps, the input wave matches preferably with the output wave. And LDPC code can improve the communication performance. The correct capability of (512, 256) LDPC code is better than (2, 1, 7) convolution code, distinctively. The design system can satisfy the communication requirements of microsatellites. So, the presented method provides a significant theory foundation for formation-flying and intersatellite communication. PMID:24078796
Mohammad, Othman; Osser, David N
2014-01-01
This new algorithm for the pharmacotherapy of acute mania was developed by the Psychopharmacology Algorithm Project at the Harvard South Shore Program. The authors conducted a literature search in PubMed and reviewed key studies, other algorithms and guidelines, and their references. Treatments were prioritized considering three main considerations: (1) effectiveness in treating the current episode, (2) preventing potential relapses to depression, and (3) minimizing side effects over the short and long term. The algorithm presupposes that clinicians have made an accurate diagnosis, decided how to manage contributing medical causes (including substance misuse), discontinued antidepressants, and considered the patient's childbearing potential. We propose different algorithms for mixed and nonmixed mania. Patients with mixed mania may be treated first with a second-generation antipsychotic, of which the first choice is quetiapine because of its greater efficacy for depressive symptoms and episodes in bipolar disorder. Valproate and then either lithium or carbamazepine may be added. For nonmixed mania, lithium is the first-line recommendation. A second-generation antipsychotic can be added. Again, quetiapine is favored, but if quetiapine is unacceptable, risperidone is the next choice. Olanzapine is not considered a first-line treatment due to its long-term side effects, but it could be second-line. If the patient, whether mixed or nonmixed, is still refractory to the above medications, then depending on what has already been tried, consider carbamazepine, haloperidol, olanzapine, risperidone, and valproate first tier; aripiprazole, asenapine, and ziprasidone second tier; and clozapine third tier (because of its weaker evidence base and greater side effects). Electroconvulsive therapy may be considered at any point in the algorithm if the patient has a history of positive response or is intolerant of medications. PMID:25188733
Optimizing chromatic aberration calibration using a novel genetic algorithm
NASA Astrophysics Data System (ADS)
Fang, Yi-Chin; Liu, Tung-Kuan; MacDonald, John; Chou, Jyh-Horng; Wu, Bo-Wen; Tsai, Hsien-Lin; Chang, En-Hao
2006-10-01
Advances in digitalized image optics has increased the importance of chromatic aberration. The axial and lateral chromatic aberrations of an optical lens depends on the choice of optical glass. Based on statistics from glass companies worldwide, more than 300 optical glasses have been developed for commercial purposes. However, the complexity of optical systems makes it extremely difficult to obtain the right solution to eliminate small chromatic aberration. Even the damped least-squares technique, which is a ray-tracing-based method, is limited owing to its inability to identify an enhanced optical system configuration. Alternatively, this study instead attempts to eliminate even negligible axial and lateral colour aberration by using algorithms involving the theories of geometric optics in triplet lens, binary and real encoding, multiple dynamic crossover and random gene mutation techniques.
NASA Astrophysics Data System (ADS)
Fustes, Diego; Ordóñez, Diego; Dafonte, Carlos; Manteiga, Minia; Arcay, Bernardino
This work presents an algorithm that was developed to select the most relevant areas of a stellar spectrum to extract its basic atmospheric parameters. We consider synthetic spectra obtained from models of stellar atmospheres in the spectral region of the radial velocity spectrograph instrument of the European Space Agency's Gaia space mission. The algorithm that demarcates the areas of the spectra sensitive to each atmospheric parameter (effective temperature and gravity, metallicity, and abundance of alpha elements) is a genetic algorithm, and the parameterization takes place through the learning of artificial neural networks. Due to the high computational cost of processing, we present a distributed implementation in both multiprocessor and multicomputer environments.
Learning Cue Phrase Patterns from Radiology Reports Using a Genetic Algorithm
Patton, Robert M; Beckerman, Barbara G; Potok, Thomas E
2009-01-01
Various computer-assisted technologies have been developed to assist radiologists in detecting cancer; however, the algorithms still lack high degrees of sensitivity and specificity, and must undergo machine learning against a training set with known pathologies in order to further refine the algorithms with higher validity of truth. This work describes an approach to learning cue phrase patterns in radiology reports that utilizes a genetic algorithm (GA) as the learning method. The approach described here successfully learned cue phrase patterns for two distinct classes of radiology reports. These patterns can then be used as a basis for automatically categorizing, clustering, or retrieving relevant data for the user.
Application of BP Neural Network Based on Genetic Algorithm in Quantitative Analysis of Mixed GAS
NASA Astrophysics Data System (ADS)
Chen, Hongyan; Liu, Wenzhen; Qu, Jian; Zhang, Bing; Li, Zhibin
Aiming at the problem of mixed gas detection in neural network and analysis on the principle of gas detection. Combining BP algorithm of genetic algorithm with hybrid gas sensors, a kind of quantitative analysis system of mixed gas is designed. The local minimum of network learning is the main reason which affects the precision of gas analysis. On the basis of the network study to improve the learning algorithms, the analyses and tests for CO, CO2 and HC compounds were tested. The results showed that the above measures effectively improve and enhance the accuracy of the neural network for gas analysis.
A novel method to design S-box based on chaotic map and genetic algorithm
NASA Astrophysics Data System (ADS)
Wang, Yong; Wong, Kwok-Wo; Li, Changbing; Li, Yang
2012-01-01
The substitution box (S-box) is an important component in block encryption algorithms. In this Letter, the problem of constructing S-box is transformed to a Traveling Salesman Problem and a method for designing S-box based on chaos and genetic algorithm is proposed. Since the proposed method makes full use of the traits of chaotic map and evolution process, stronger S-box is obtained. The results of performance test show that the presented S-box has good cryptographic properties, which justify that the proposed algorithm is effective in generating strong S-boxes.
Chaos-based image encryption using a hybrid genetic algorithm and a DNA sequence
NASA Astrophysics Data System (ADS)
Enayatifar, Rasul; Abdullah, Abdul Hanan; Isnin, Ismail Fauzi
2014-05-01
The paper studies a recently developed evolutionary-based image encryption algorithm. A novel image encryption algorithm based on a hybrid model of deoxyribonucleic acid (DNA) masking, a genetic algorithm (GA) and a logistic map is proposed. This study uses DNA and logistic map functions to create the number of initial DNA masks and applies GA to determine the best mask for encryption. The significant advantage of this approach is improving the quality of DNA masks to obtain the best mask that is compatible with plain images. The experimental results and computer simulations both confirm that the proposed scheme not only demonstrates excellent encryption but also resists various typical attacks.
Color tongue image segmentation using fuzzy Kohonen networks and genetic algorithm
NASA Astrophysics Data System (ADS)
Wang, Aimin; Shen, Lansun; Zhao, Zhongxu
2000-04-01
A Tongue Imaging and Analysis System is being developed to acquire digital color tongue images, and to automatically classify and quantify the tongue characteristics for traditional Chinese medical examinations. An important processing step is to segment the tongue pixels into two categories, the tongue body (no coating) and the coating. In this paper, we present a two-stage clustering algorithm that combines Fuzzy Kohonen Clustering Networks and Genetic Algorithm for the segmentation, of which the major concern is to increase the interclass distance and at the same time decrease the intraclass distance. Experimental results confirm the effectiveness of this algorithm.
NASA Astrophysics Data System (ADS)
Zhou, Mandi; Shu, Jiong; Chen, Zhigang; Ji, Minhe
2012-11-01
Hyperspectral imagery has been widely used in terrain classification for its high resolution. Urban vegetation, known as an essential part of the urban ecosystem, can be difficult to discern due to high similarity of spectral signatures among some land-cover classes. In this paper, we investigate a hybrid approach of the genetic-algorithm tuned fuzzy support vector machine (GA-FSVM) technique and apply it to urban vegetation classification from aerial hyperspectral urban imagery. The approach adopts the genetic algorithm to optimize parameters of support vector machine, and employs the K-nearest neighbor algorithm to calculate the membership function for each fuzzy parameter, aiming to reduce the effects of the isolated and noisy samples. Test data come from push-broom hyperspectral imager (PHI) hyperspectral remote sensing image which partially covers a corner of the Shanghai World Exposition Park, while PHI is a hyper-spectral sensor developed by Shanghai Institute of Technical Physics. Experimental results show the GA-FSVM model generates overall accuracy of 71.2%, outperforming the maximum likelihood classifier with 49.4% accuracy and the artificial neural network method with 60.8% accuracy. It indicates GA-FSVM is a promising model for vegetation classification from hyperspectral urban data, and has good advantage in the application of classification involving abundant mixed pixels and small samples problem.
Automating the packing heuristic design process with genetic programming.
Burke, Edmund K; Hyde, Matthew R; Kendall, Graham; Woodward, John
2012-01-01
The literature shows that one-, two-, and three-dimensional bin packing and knapsack packing are difficult problems in operational research. Many techniques, including exact, heuristic, and metaheuristic approaches, have been investigated to solve these problems and it is often not clear which method to use when presented with a new instance. This paper presents an approach which is motivated by the goal of building computer systems which can design heuristic methods. The overall aim is to explore the possibilities for automating the heuristic design process. We present a genetic programming system to automatically generate a good quality heuristic for each instance. It is not necessary to change the methodology depending on the problem type (one-, two-, or three-dimensional knapsack and bin packing problems), and it therefore has a level of generality unmatched by other systems in the literature. We carry out an extensive suite of experiments and compare with the best human designed heuristics in the literature. Note that our heuristic design methodology uses the same parameters for all the experiments. The contribution of this paper is to present a more general packing methodology than those currently available, and to show that, by using this methodology, it is possible for a computer system to design heuristics which are competitive with the human designed heuristics from the literature. This represents the first packing algorithm in the literature able to claim human competitive results in such a wide variety of packing domains. PMID:21609273
Performance of a community detection algorithm based on semidefinite programming
NASA Astrophysics Data System (ADS)
Ricci-Tersenghi, Federico; Javanmard, Adel; Montanari, Andrea
2016-03-01
The problem of detecting communities in a graph is maybe one the most studied inference problems, given its simplicity and widespread diffusion among several disciplines. A very common benchmark for this problem is the stochastic block model or planted partition problem, where a phase transition takes place in the detection of the planted partition by changing the signal-to-noise ratio. Optimal algorithms for the detection exist which are based on spectral methods, but we show these are extremely sensible to slight modification in the generative model. Recently Javanmard, Montanari and Ricci-Tersenghi [1] have used statistical physics arguments, and numerical simulations to show that finding communities in the stochastic block model via semidefinite programming is quasi optimal. Further, the resulting semidefinite relaxation can be solved efficiently, and is very robust with respect to changes in the generative model. In this paper we study in detail several practical aspects of this new algorithm based on semidefinite programming for the detection of the planted partition. The algorithm turns out to be very fast, allowing the solution of problems with O(105) variables in few second on a laptop computer.
Automatic 3D image registration using voxel similarity measurements based on a genetic algorithm
NASA Astrophysics Data System (ADS)
Huang, Wei; Sullivan, John M., Jr.; Kulkarni, Praveen; Murugavel, Murali
2006-03-01
An automatic 3D non-rigid body registration system based upon the genetic algorithm (GA) process is presented. The system has been successfully applied to 2D and 3D situations using both rigid-body and affine transformations. Conventional optimization techniques and gradient search strategies generally require a good initial start location. The GA approach avoids the local minima/maxima traps of conventional optimization techniques. Based on the principles of Darwinian natural selection (survival of the fittest), the genetic algorithm has two basic steps: 1. Randomly generate an initial population. 2. Repeated application of the natural selection operation until a termination measure is satisfied. The natural selection process selects individuals based on their fitness to participate in the genetic operations; and it creates new individuals by inheritance from both parents, genetic recombination (crossover) and mutation. Once the termination criteria are satisfied, the optimum is selected from the population. The algorithm was applied on 2D and 3D magnetic resonance images (MRI). It does not require any preprocessing such as threshold, smoothing, segmentation, or definition of base points or edges. To evaluate the performance of the GA registration, the results were compared with results of the Automatic Image Registration technique (AIR) and manual registration which was used as the gold standard. Results showed that our GA implementation was a robust algorithm and gives very close results to the gold standard. A pre-cropping strategy was also discussed as an efficient preprocessing step to enhance the registration accuracy.