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Sample records for alice isd brooks

  1. lean-ISD.

    ERIC Educational Resources Information Center

    Wallace, Guy W.

    2001-01-01

    Explains lean instructional systems design/development (ISD) as it relates to curriculum architecture design, based on Japan's lean production system. Discusses performance-based systems; ISD models; processes for organizational training and development; curriculum architecture to support job performance; and modular curriculum development. (LRW)

  2. Guidelines for ISDS.

    ERIC Educational Resources Information Center

    United Nations Educational, Scientific, and Cultural Organization, Paris (France).

    As established within the framework of the UNISIST world science information system, the International Serials Data System (ISDS) is an international network of operational national and regional centers, jointly responsible for the creation and maintenance of computer based data banks, which contain essential information for the identification of…

  3. Heme Recognition By a Staphylococcus Aureus IsdE

    SciTech Connect

    Grigg, J.C.; Vermeiren, C.L.; Heinrichs, D.E.; Murphy, M.E.P.

    2009-06-03

    Staphylococcus aureus is a Gram-positive bacterial pathogen and a leading cause of hospital acquired infections. Because the free iron concentration in the human body is too low to support growth, S. aureus must acquire iron from host sources. Heme iron is the most prevalent iron reservoir in the human body and a predominant source of iron for S. aureus. The iron-regulated surface determinant (Isd) system removes heme from host heme proteins and transfers it to IsdE, the cognate substrate-binding lipoprotein of an ATP-binding cassette transporter, for import and subsequent degradation. Herein, we report the crystal structure of the soluble portion of the IsdE lipoprotein in complex with heme. The structure reveals a bi-lobed topology formed by an N- and C-terminal domain bridged by a single {alpha}-helix. The structure places IsdE as a member of the helical backbone metal receptor superfamily. A six-coordinate heme molecule is bound in the groove established at the domain interface, and the heme iron is coordinated in a novel fashion for heme transporters by Met{sup 78} and His{sup 229}. Both heme propionate groups are secured by H-bonds to IsdE main chain and side chain groups. Of these residues, His{sup 299} is essential for IsdE-mediated heme uptake by S. aureus when growth on heme as a sole iron source is measured. Multiple sequence alignments of homologues from several other Gram-positive bacteria, including the human pathogens pyogenes, Bacillus anthracis, and Listeria monocytogenes, suggest that these other systems function equivalently to S. aureus IsdE with respect to heme binding and transport.

  4. Iron-Regulated Surface Determinant (Isd) Proteins of Staphylococcus lugdunensis

    PubMed Central

    Zapotoczna, Marta; Heilbronner, Simon; Speziale, Pietro

    2012-01-01

    Staphylococcus lugdunensis is the only coagulase-negative Staphylococcus species with a locus encoding iron-regulated surface determinant (Isd) proteins. In Staphylococcus aureus, the Isd proteins capture heme from hemoglobin and transfer it across the wall to a membrane-bound transporter, which delivers it into the cytoplasm, where heme oxygenases release iron. The Isd proteins of S. lugdunensis are expressed under iron-restricted conditions. We propose that S. lugdunensis IsdB and IsdC proteins perform the same functions as those of S. aureus. S. lugdunensis IsdB is the only hemoglobin receptor within the isd locus. It specifically binds human hemoglobin with a dissociation constant (Kd) of 23 nM and transfers heme on IsdC. IsdB expression promotes bacterial growth in an iron-limited medium containing human hemoglobin but not mouse hemoglobin. This correlates with weak binding of IsdB to mouse hemoglobin in vitro. Unlike IsdB and IsdC, the proteins IsdJ and IsdK are not sorted to the cell wall in S. lugdunensis. In contrast, IsdJ expressed in S. aureus and Lactococcus lactis is anchored to peptidoglycan, suggesting that S. lugdunensis sortases may differ in signal recognition or could be defective. IsdJ and IsdK are present in the culture supernatant, suggesting that they could acquire heme from the external milieu. The IsdA protein of S. aureus protects bacteria from bactericidal lipids due to its hydrophilic C-terminal domain. IsdJ has a similar region and protected S. aureus and L. lactis as efficiently as IsdA but, possibly due to its location, was less effective in its natural host. PMID:23002220

  5. Four Levels of Moral Conflict in ISD

    NASA Astrophysics Data System (ADS)

    Vartiainen, Tero

    This study introduces a literature-based classification of moral conflicts in information systems development (ISD). The classification describes what moral conflicts an IS professional confronts in ISD as a whole and includes intentional, functional, managerial, and societal levels. The internal structure of moral conflicts is exemplified by means of a philosophical and a business ethics theory. The limitations of the study are considered and practical implications for the teaching of computer ethics are discussed.

  6. ALICE Collaboration

    NASA Astrophysics Data System (ADS)

    Abelev, B.; Adam, J.; Adamová, D.; Aggarwal, M. M.; Aglieri Rinella, G.; Agnello, M.; Agostinelli, A.; Agrawal, N.; Ahammed, Z.; Ahmad, N.; Ahmed, I.; Ahn, S. U.; Ahn, S. A.; Aimo, I.; Aiola, S.; Ajaz, M.; Akindinov, A.; Alam, S. N.; Aleksandrov, D.; Alessandro, B.; Alexandre, D.; Alici, A.; Alkin, A.; Alme, J.; Alt, T.; Altinpinar, S.; Altsybeev, I.; Alves Garcia Prado, C.; Andrei, C.; Andronic, A.; Anguelov, V.; Anielski, J.; Antičić, T.; Antinori, F.; Antonioli, P.; Aphecetche, L.; Appelshäuser, H.; Arcelli, S.; Armesto, N.; Arnaldi, R.; Aronsson, T.; Arsene, I. C.; Arslandok, M.; Augustinus, A.; Averbeck, R.; Awes, T. C.; Azmi, M. D.; Bach, M.; Badalà, A.; Baek, Y. W.; Bagnasco, S.; Bailhache, R.; Bala, R.; Baldisseri, A.; Baltasar Dos Santos Pedrosa, F.; Baral, R. C.; Barbera, R.; Barile, F.; Barnaföldi, G. G.; Barnby, L. S.; Barret, V.; Bartke, J.; Basile, M.; Bastid, N.; Basu, S.; Bathen, B.; Batigne, G.; Batista Camejo, A.; Batyunya, B.; Batzing, P. C.; Baumann, C.; Bearden, I. G.; Beck, H.; Bedda, C.; Behera, N. K.; Belikov, I.; Bellini, F.; Bellwied, R.; Belmont, R.; Belmont-Moreno, E.; Belyaev, V.; Bencedi, G.; Beole, S.; Berceanu, I.; Bercuci, A.; Berdnikov, Y.; Berenyi, D.; Berger, M. E.; Bertens, R. A.; Berzano, D.; Betev, L.; Bhasin, A.; Bhat, I. R.; Bhati, A. K.; Bhattacharjee, B.; Bhom, J.; Bianchi, L.; Bianchi, N.; Bianchin, C.; Bielčík, J.; Bielčíková, J.; Bilandzic, A.; Bjelogrlic, S.; Blanco, F.; Blau, D.; Blume, C.; Bock, F.; Bogdanov, A.; Bøggild, H.; Bogolyubsky, M.; Böhmer, F. V.; Boldizsár, L.; Bombara, M.; Book, J.; Borel, H.; Borissov, A.; Bossú, F.; Botje, M.; Botta, E.; Böttger, S.; Braun-Munzinger, P.; Bregant, M.; Breitner, T.; Broker, T. A.; Browning, T. A.; Broz, M.; Bruna, E.; Bruno, G. E.; Budnikov, D.; Buesching, H.; Bufalino, S.; Buncic, P.; Busch, O.; Buthelezi, Z.; Caffarri, D.; Cai, X.; Caines, H.; Calero Diaz, L.; Caliva, A.; Calvo Villar, E.; Camerini, P.; Carena, F.; Carena, W.; Castillo Castellanos, J.; Casula, E. A. R.; Catanescu, V.; Cavicchioli, C.; Ceballos Sanchez, C.; Cepila, J.; Cerello, P.; Chang, B.; Chapeland, S.; Charvet, J. L.; Chattopadhyay, S.; Chattopadhyay, S.; Chelnokov, V.; Cherney, M.; Cheshkov, C.; Cheynis, B.; Chibante Barroso, V.; Chinellato, D. D.; Chochula, P.; Chojnacki, M.; Choudhury, S.; Christakoglou, P.; Christensen, C. H.; Christiansen, P.; Chujo, T.; Chung, S. U.; Cicalo, C.; Cifarelli, L.; Cindolo, F.; Cleymans, J.; Colamaria, F.; Colella, D.; Collu, A.; Colocci, M.; Conesa Balbastre, G.; Conesa del Valle, Z.; Connors, M. E.; Contreras, J. G.; Cormier, T. M.; Corrales Morales, Y.; Cortese, P.; Cortés Maldonado, I.; Cosentino, M. R.; Costa, F.; Crochet, P.; Cruz Albino, R.; Cuautle, E.; Cunqueiro, L.; Dainese, A.; Danu, A.; Das, D.; Das, I.; Das, K.; Das, S.; Dash, A.; Dash, S.; De, S.; Delagrange, H.; Deloff, A.; Dénes, E.; D'Erasmo, G.; De Caro, A.; de Cataldo, G.; de Cuveland, J.; De Falco, A.; De Gruttola, D.; De Marco, N.; De Pasquale, S.; de Rooij, R.; Diaz Corchero, M. A.; Dietel, T.; Dillenseger, P.; Divià, R.; Di Bari, D.; Di Liberto, S.; Di Mauro, A.; Di Nezza, P.; Djuvsland, Ø.; Dobrin, A.; Dobrowolski, T.; Domenicis Gimenez, D.; Dönigus, B.; Dordic, O.; Dørheim, S.; Dubey, A. K.; Dubla, A.; Ducroux, L.; Dupieux, P.; Dutta Majumdar, A. K.; Hilden, T. E.; Ehlers, R. J.; Elia, D.; Engel, H.; Erazmus, B.; Erdal, H. A.; Eschweiler, D.; Espagnon, B.; Esposito, M.; Estienne, M.; Esumi, S.; Evans, D.; Evdokimov, S.; Fabris, D.; Faivre, J.; Falchieri, D.; Fantoni, A.; Fasel, M.; Fehlker, D.; Feldkamp, L.; Felea, D.; Feliciello, A.; Feofilov, G.; Ferencei, J.; Fernández Téllez, A.; Ferreiro, E. G.; Ferretti, A.; Festanti, A.; Figiel, J.; Figueredo, M. A. S.; Filchagin, S.; Finogeev, D.; Fionda, F. M.; Fiore, E. M.; Floratos, E.; Floris, M.; Foertsch, S.; Foka, P.; Fokin, S.; Fragiacomo, E.; Francescon, A.; Frankenfeld, U.; Fuchs, U.; Furget, C.; Furs, A.; Fusco Girard, M.; Gaardhøje, J. J.; Gagliardi, M.; Gago, A. M.; Gallio, M.; Gangadharan, D. R.; Ganoti, P.; Gao, C.; Garabatos, C.; Garcia-Solis, E.; Gargiulo, C.; Garishvili, I.; Gerhard, J.; Germain, M.; Gheata, A.; Gheata, M.; Ghidini, B.; Ghosh, P.; Ghosh, S. K.; Gianotti, P.; Giubellino, P.; Gladysz-Dziadus, E.; Glässel, P.; Gomez Ramirez, A.; González-Zamora, P.; Gorbunov, S.; Görlich, L.; Gotovac, S.; Graczykowski, L. K.; Grelli, A.; Grigoras, A.; Grigoras, C.; Grigoriev, V.; Grigoryan, A.; Grigoryan, S.; Grinyov, B.; Grion, N.; Grosse-Oetringhaus, J. F.; Grossiord, J.-Y.; Grosso, R.; Guber, F.; Guernane, R.; Guerzoni, B.; Guilbaud, M.; Gulbrandsen, K.; Gulkanyan, H.; Gumbo, M.; Gunji, T.; Gupta, A.; Gupta, R.; Khan, K. H.; Haake, R.; Haaland, Ø.; Hadjidakis, C.; Haiduc, M.; Hamagaki, H.; Hamar, G.; Hanratty, L. D.; Hansen, A.; Harris, J. W.; Hartmann, H.; Harton, A.; Hatzifotiadou, D.; Hayashi, S.; Heckel, S. T.; Heide, M.; Helstrup, H.; Herghelegiu, A.; Herrera Corral, G.; Hess, B. A.; Hetland, K. F.; Hippolyte, B.; Hladky, J.; Hristov, P.; Huang, M.; Humanic, T. J.; Hussain, N.; Hussain, T.; Hutter, D.; Hwang, D. S.; Ilkaev, R.; Ilkiv, I.; Inaba, M.; Innocenti, G. M.; Ionita, C.; Ippolitov, M.; Irfan, M.; Ivanov, M.; Ivanov, V.; Jachołkowski, A.; Jacobs, P. M.; Jahnke, C.; Jang, H. J.; Janik, M. A.; Jayarathna, P. H. S. Y.; Jena, C.; Jena, S.; Jimenez Bustamante, R. T.; Jones, P. G.; Jung, H.; Jusko, A.; Kadyshevskiy, V.; Kalinak, P.; Kalweit, A.; Kamin, J.; Kang, J. H.; Kaplin, V.; Kar, S.; Karasu Uysal, A.; Karavichev, O.; Karavicheva, T.; Karpechev, E.; Kebschull, U.; Keidel, R.; Keijdener, D. L. D.; Keil SVN, M.; Khan, M. M.; Khan, P.; Khan, S. A.; Khanzadeev, A.; Kharlov, Y.; Kileng, B.; Kim, B.; Kim, D. W.; Kim, D. J.; Kim, J. S.; Kim, M.; Kim, M.; Kim, S.; Kim, S. H.; Kim, T.; Kirsch, S.; Kisel, I.; Kiselev, S.; Kisiel, A.; Kiss, G.; Klay, J. L.; Klein, J.; Klein-Bösing, C.; Kluge, A.; Knichel, M. L.; Knospe, A. G.; Kobdaj, C.; Kofarago, M.; Köhler, M. K.; Kollegger, T.; Kolojvari, A.; Kondratiev, V.; Kondratyeva, N.; Konevskikh, A.; Kovalenko, V.; Kowalski, M.; Kox, S.; Koyithatta Meethaleveedu, G.; Kral, J.; Králik, I.; Kravčáková, A.; Krelina, M.; Kretz, M.; Krivda, M.; Krizek, F.; Kryshen, E.; Krzewicki, M.; Kučera, V.; Kucheriaev, Y.; Kugathasan, T.; Kuhn, C.; Kuijer, P. G.; Kulakov, I.; Kumar, J.; Kurashvili, P.; Kurepin, A.; Kurepin, A. B.; Kuryakin, A.; Kushpil, S.; Kweon, M. J.; Kwon, Y.; Ladron de Guevara, P.; Lagana Fernandes, C.; Lakomov, I.; Langoy, R.; Lara, C.; Lardeux, A.; Lattuca, A.; La Pointe, S. L.; La Rocca, P.; Lea, R.; Leardini, L.; Lee, G. R.; Legrand, I.; Lehnert, J.; Lemmon, R. C.; Lenti, V.; Leogrande, E.; Leoncino, M.; León Monzón, I.; Lévai, P.; Li, S.; Lien, J.; Lietava, R.; Lindal, S.; Lindenstruth, V.; Lippmann, C.; Lisa, M. A.; Ljunggren, H. M.; Lodato, D. F.; Loenne, P. I.; Loggins, V. R.; Loginov, V.; Lohner, D.; Loizides, C.; Lopez, X.; López Torres, E.; Lu, X.-G.; Luettig, P.; Lunardon, M.; Luparello, G.; Ma, R.; Maevskaya, A.; Mager, M.; Mahapatra, D. P.; Mahmood, S. M.; Maire, A.; Majka, R. D.; Malaev, M.; Maldonado Cervantes, I.; Malinina, L.; Mal'Kevich, D.; Malzacher, P.; Mamonov, A.; Manceau, L.; Manko, V.; Manso, F.; Manzari, V.; Marchisone, M.; Mareš, J.; Margagliotti, G. V.; Margotti, A.; Marín, A.; Markert, C.; Marquard, M.; Martashvili, I.; Martin, N. A.; Martinengo, P.; Martínez, M. I.; Martínez García, G.; Martin Blanco, J.; Martynov, Y.; Mas, A.; Masciocchi, S.; Masera, M.; Masoni, A.; Massacrier, L.; Mastroserio, A.; Matyja, A.; Mayer, C.; Mazer, J.; Mazzoni, M. A.; Meddi, F.; Menchaca-Rocha, A.; Meninno, E.; Mercado Pérez, J.; Meres, M.; Miake, Y.; Mikhaylov, K.; Milano, L.; Milosevic, J.; Mischke, A.; Mishra, A. N.; Miśkowiec, D.; Mitra, J.; Mitu, C. M.; Mlynarz, J.; Mohammadi, N.; Mohanty, B.; Molnar, L.; Montaño Zetina, L.; Montes, E.; Morando, M.; Moreira De Godoy, D. A.; Moretto, S.; Morreale, A.; Morsch, A.; Muccifora, V.; Mudnic, E.; Mühlheim, D.; Muhuri, S.; Mukherjee, M.; Müller, H.; Munhoz, M. G.; Murray, S.; Musa, L.; Musinsky, J.; Nandi, B. K.; Nania, R.; Nappi, E.; Naru, M. U.; Nattrass, C.; Nayak, K.; Nayak, T. K.; Nazarenko, S.; Nedosekin, A.; Nicassio, M.; Niculescu, M.; Niedziela, J.; Nielsen, B. S.; Nikolaev, S.; Nikulin, S.; Nikulin, V.; Nilsen, B. S.; Noferini, F.; Nomokonov, P.; Nooren, G.; Norman, J.; Nyanin, A.; Nystrand, J.; Oeschler, H.; Oh, S.; Oh, S. K.; Okatan, A.; Okubo, T.; Olah, L.; Oleniacz, J.; Oliveira Da Silva, A. C.; Onderwaater, J.; Oppedisano, C.; Ortiz Velasquez, A.; Oskarsson, A.; Otwinowski, J.; Oyama, K.; Ozdemir, M.; Sahoo, P.; Pachmayer, Y.; Pachr, M.; Pagano, P.; Paić, G.; Pajares, C.; Pal, S. K.; Palmeri, A.; Pant, D.; Papikyan, V.; Pappalardo, G. S.; Pareek, P.; Park, W. J.; Parmar, S.; Passfeld, A.; Patalakha, D. I.; Paticchio, V.; Paul, B.; Pawlak, T.; Peitzmann, T.; Pereira Da Costa, H.; Pereira De Oliveira Filho, E.; Peresunko, D.; Pérez Lara, C. E.; Pesci, A.; Peskov, V.; Pestov, Y.; Petráček, V.; Petran, M.; Petris, M.; Petrovici, M.; Petta, C.; Piano, S.; Pikna, M.; Pillot, P.; Pinazza, O.; Pinsky, L.; Piyarathna, D. B.; Płoskoń, M.; Planinic, M.; Pluta, J.; Pochybova, S.; Podesta-Lerma, P. L. M.; Poghosyan, M. G.; Pohjoisaho, E. H. O.; Polichtchouk, B.; Poljak, N.; Pop, A.; Porteboeuf-Houssais, S.; Porter, J.; Potukuchi, B.; Prasad, S. K.; Preghenella, R.; Prino, F.; Pruneau, C. A.; Pshenichnov, I.; Puccio, M.; Puddu, G.; Pujahari, P.; Punin, V.; Putschke, J.; Qvigstad, H.; Rachevski, A.; Raha, S.; Rajput, S.; Rak, J.; Rakotozafindrabe, A.; Ramello, L.; Raniwala, R.; Raniwala, S.; Räsänen, S. S.; Rascanu, B. T.; Rathee, D.; Rauf, A. W.; Razazi, V.; Read, K. F.; Real, J. S.; Redlich, K.; Reed, R. J.; Rehman, A.; Reichelt, P.; Reicher, M.; Reidt, F.; Renfordt, R.; Reolon, A. R.; Reshetin, A.; Rettig, F.; Revol, J.-P.; Reygers, K.; Riabov, V.; Ricci, R. A.; Richert, T.; Richter, M.; Riedler, P.; Riegler, W.; Riggi, F.; Rivetti, A.; Rocco, E.; Rodríguez Cahuantzi, M.; Rodriguez Manso, A.; Røed, K.; Rogochaya, E.; Rohni, S.; Rohr, D.; Röhrich, D.; Romita, R.; Ronchetti, F.; Ronflette, L.; Rosnet, P.; Rossi, A.; Roukoutakis, F.; Roy, A.; Roy, C.; Roy, P.; Rubio Montero, A. J.; Rui, R.; Russo, R.; Ryabinkin, E.; Ryabov, Y.; Rybicki, A.; Sadovsky, S.; Šafařík, K.; Sahlmuller, B.; Sahoo, R.; Sahu, P. K.; Saini, J.; Sakai, S.; Salgado, C. A.; Salzwedel, J.; Sambyal, S.; Samsonov, V.; Sanchez Castro, X.; Sánchez Rodríguez, F. J.; Šándor, L.; Sandoval, A.; Sano, M.; Santagati, G.; Sarkar, D.; Scapparone, E.; Scarlassara, F.; Scharenberg, R. P.; Schiaua, C.; Schicker, R.; Schmidt, C.; Schmidt, H. R.; Schuchmann, S.; Schukraft, J.; Schulc, M.; Schuster, T.; Schutz, Y.; Schwarz, K.; Schweda, K.; Scioli, G.; Scomparin, E.; Scott, R.; Segato, G.; Seger, J. E.; Sekiguchi, Y.; Selyuzhenkov, I.; Senosi, K.; Seo, J.; Serradilla, E.; Sevcenco, A.; Shabetai, A.; Shabratova, G.; Shahoyan, R.; Shangaraev, A.; Sharma, A.; Sharma, N.; Sharma, S.; Shigaki, K.; Shtejer, K.; Sibiriak, Y.; Siddhanta, S.; Siemiarczuk, T.; Silvermyr, D.; Silvestre, C.; Simatovic, G.; Singaraju, R.; Singh, R.; Singha, S.; Singhal, V.; Sinha, B. C.; Sinha, T.; Sitar, B.; Sitta, M.; Skaali, T. B.; Skjerdal, K.; Slupecki, M.; Smirnov, N.; Snellings, R. J. M.; Søgaard, C.; Soltz, R.; Song, J.; Song, M.; Soramel, F.; Sorensen, S.; Spacek, M.; Spiriti, E.; Sputowska, I.; Spyropoulou-Stassinaki, M.; Srivastava, B. K.; Stachel, J.; Stan, I.; Stefanek, G.; Steinpreis, M.; Stenlund, E.; Steyn, G.; Stiller, J. H.; Stocco, D.; Stolpovskiy, M.; Strmen, P.; Suaide, A. A. P.; Sugitate, T.; Suire, C.; Suleymanov, M.; Sultanov, R.; Šumbera, M.; Susa, T.; Symons, T. J. M.; Szabo, A.; Szanto de Toledo, A.; Szarka, I.; Szczepankiewicz, A.; Szymanski, M.; Takahashi, J.; Tangaro, M. A.; Tapia Takaki, J. D.; Tarantola Peloni, A.; Tarazona Martinez, A.; Tariq, M.; Tarzila, M. G.; Tauro, A.; Tejeda Muñoz, G.; Telesca, A.; Terasaki, K.; Terrevoli, C.; Thäder, J.; Thomas, D.; Tieulent, R.; Timmins, A. R.; Toia, A.; Trubnikov, V.; Trzaska, W. H.; Tsuji, T.; Tumkin, A.; Turrisi, R.; Tveter, T. S.; Ullaland, K.; Uras, A.; Usai, G. L.; Vajzer, M.; Vala, M.; Valencia Palomo, L.; Vallero, S.; Vande Vyvre, P.; Van Der Maarel, J.; Van Hoorne, J. W.; van Leeuwen, M.; Vargas, A.; Vargyas, M.; Varma, R.; Vasileiou, M.; Vasiliev, A.; Vechernin, V.; Veldhoen, M.; Velure, A.; Venaruzzo, M.; Vercellin, E.; Vergara Limón, S.; Vernet, R.; Verweij, M.; Vickovic, L.; Viesti, G.; Viinikainen, J.; Vilakazi, Z.; Villalobos Baillie, O.; Vinogradov, A.; Vinogradov, L.; Vinogradov, Y.; Virgili, T.; Vislavicius, V.; Viyogi, Y. P.; Vodopyanov, A.; Völkl, M. A.; Voloshin, K.; Voloshin, S. A.; Volpe, G.; von Haller, B.; Vorobyev, I.; Vranic, D.; Vrláková, J.; Vulpescu, B.; Vyushin, A.; Wagner, B.; Wagner, J.; Wagner, V.; Wang, M.; Wang, Y.; Watanabe, D.; Weber, M.; Weber, S. G.; Wessels, J. P.; Westerhoff, U.; Wiechula, J.; Wikne, J.; Wilde, M.; Wilk, G.; Wilkinson, J.; Williams, M. C. S.; Windelband, B.; Winn, M.; Yaldo, C. G.; Yamaguchi, Y.; Yang, H.; Yang, P.; Yang, S.; Yano, S.; Yasnopolskiy, S.; Yi, J.; Yin, Z.; Yoo, I.-K.; Yushmanov, I.; Zaborowska, A.; Zaccolo, V.; Zach, C.; Zaman, A.; Zampolli, C.; Zaporozhets, S.; Zarochentsev, A.; Závada, P.; Zaviyalov, N.; Zbroszczyk, H.; Zgura, I. S.; Zhalov, M.; Zhang, H.; Zhang, X.; Zhang, Y.; Zhao, C.; Zhigareva, N.; Zhou, D.; Zhou, F.; Zhou, Y.; Zhou, Zhuo; Zhu, H.; Zhu, J.; Zhu, X.; Zichichi, A.; Zimmermann, A.; Zimmermann, M. B.; Zinovjev, G.; Zoccarato, Y.; Zyzak, M.

    2014-11-01

    The ALICE Collaboration would like to thank all its engineers and technicians for their invaluable contributions to the construction of the experiment and the CERN accelerator teams for the outstanding performance of the LHC complex.

  7. Ruffling of Metalloporphyrins Bound to IsdG And IsdI, Two Heme Degrading Enzymes in Staphylococcus Aureus

    SciTech Connect

    Lee, W.C.; Reniere, M.L.; Skaar, E.P.; Murphy, M.E.P.

    2009-05-19

    IsdG and IsdI are paralogous proteins that are intracellular components of a complex heme uptake system in Staphylococcus aureus. IsdG and IsdI were shown previously to reductively degrade hemin. Crystal structures of the apoproteins show that these proteins belong to a newly identified heme degradation family distinct from canonical eukaryotic and prokaryotic heme oxygenases. Here we report the crystal structures of an inactive N7A variant of IsdG in complex with Fe{sup 3+}-protoporphyrin IX (IsdG-hemin) and of IsdI in complex with cobalt protoporphyrin IX (IsdI-CoPPIX) to 1.8 {angstrom} or better resolution. These structures show that the metalloporphyrins are buried into similar deep clefts such that the propionic acids form salt bridges to two Arg residues. His{sup 77} (IsdG) or His{sup 76} (IsdI), a critical residue required for activity, is coordinated to the Fe{sup 3+} or Co{sup 3+} atoms, respectively. The bound porphyrin rings form extensive steric interactions in the binding cleft such that the rings are highly distorted from the plane. This distortion is best described as ruffled and places the {beta}- and {delta}-meso carbons proximal to the distal oxygen-binding site. In the IsdG-hemin structure, Fe{sup 3+} is pentacoordinate, and the distal side is occluded by the side chain of Ile{sup 55}. However, in the structure of IsdI-CoPPIX, the distal side of the CoPPIX accommodates a chloride ion in a cavity formed through a conformational change in Ile{sup 55}. The chloride ion participates in a hydrogen bond to the side chain amide of Asn{sup 6}. Together the structures suggest a reaction mechanism in which a reactive peroxide intermediate proceeds with nucleophilic oxidation at the {beta}- or {delta}-meso carbon of the hemin.

  8. Why Can't We Bet on ISD Outcomes: ISD ``Form'' as a Predictor of Success

    NASA Astrophysics Data System (ADS)

    Newman, Mike; Pan, Shan L.; Pan, Gary

    The record of failure to deliver large-scale information systems (IS) in a timely fashion that offer value to major commercial and public organizations is legendary. Just looking to critical success factors such as top management support and user involvement in order to understand how to deliver better systems can at best be a partial solution. We seem to overlook an obvious area in our organizations: what can we learn from our information system development (ISD) historical patterns? In order to develop this idea we draw on parallels in sport where current performance and behaviour are believed to be closely linked to historical precedents, or “form”. In that domain, historical patterns are a fallible but valuable predictor of success. Our thesis is that past negative patterns in ISD will tend to repeat themselves without radical intervention. Put another way, failure begets failure. After examining the game of football as an allegory for ISD, we look briefly at two organizations that have experienced a pattern of failure in the IS area in the past but have transformed the way they build IS, moving from negative patterns to successful ones. This chapter ends with suggestions for managers charged with developing new IS as to how they might use their understanding of ISD “form” to improve their chances of success.

  9. Staphylococcus lugdunensis IsdG liberates iron from host heme.

    PubMed

    Haley, Kathryn P; Janson, Eric M; Heilbronner, Simon; Foster, Timothy J; Skaar, Eric P

    2011-09-01

    Staphylococcus lugdunensis is often found as part of the normal flora of human skin but has the potential to cause serious infections even in healthy individuals. It remains unclear what factors enable S. lugdunensis to transition from a skin commensal to an invasive pathogen. Analysis of the complete genome reveals a putative iron-regulated surface determinant (Isd) system encoded within S. lugdunensis. In other bacteria, the Isd system permits the utilization of host heme as a source of nutrient iron to facilitate bacterial growth during infection. In this study, we establish that S. lugdunensis expresses an iron-regulated IsdG-family heme oxygenase that binds and degrades heme. Heme degradation by IsdG results in the release of free iron and the production of the chromophore staphylobilin. IsdG-mediated heme catabolism enables the use of heme as a sole source of iron, establishing IsdG as a pathophysiologically relevant heme oxygenase in S. lugdunensis. Together these findings offer insight into how S. lugdunensis fulfills its nutritional requirements while invading host tissues and establish the S. lugdunensis Isd system as being involved in heme-iron utilization.

  10. Changing Images of Alice.

    ERIC Educational Resources Information Center

    Cleaver, Betty P.; Erdman, Barbara

    This paper examines the depiction of Alice in illustrated versions of "Alice in Wonderland" by Lewis Carroll. The primary concern was to determine if the character of Alice had changed historically through the interpretation of different illustrators and to determine what the changes were and what their impact might have on the interpretation of…

  11. A Strong Independent Community College for the District of Columbia. Testimony of Alice M. Rivlin, Senior Fellow and Director of Greater Washington Research at the Brookings Institution, before the Council of the District of Columbia Committee of the Whole Community College Roundtable

    ERIC Educational Resources Information Center

    Rivlin, Alice M.

    2009-01-01

    In this testimony, the author talks briefly about how the District of Columbia Appleseed and her organization, Greater Washington Research at Brookings, came to sponsor the community college feasibility study they have released. In 2008, both Brookings and DC Appleseed published papers highlighting the importance of providing opportunities for DC…

  12. Brooke-Spiegler syndrome.

    PubMed

    Szepietowski, J C; Wasik, F; Szybejko-Machaj, G; Bieniek, A; Schwartz, R A

    2001-07-01

    The Brooke-Spiegler syndrome is an autosomal dominant one characterized by cylindromas, trichoepitheliomas and occasionally spiradenomas. Within a given family, some members may have cylindromas whereas others may have trichoepitheliomas or both. We describe the coexistence of trichoepithelioma papulosum multiplex (also known as epithelioma adenoides cysticum of Brooke) and cylindromas in a 30-year-old man, and discuss the relationship between these two autosomal dominant syndromes.

  13. The ALICE Electromagnetic Calorimeter

    SciTech Connect

    Awes, Terry C; ALICE, Collaboration

    2010-01-01

    ALICE is the general purpose experiment at the LHC dedicated to the study of heavy-ion collisions. The electromagnetic calorimeter (EMCal) is a late addition to the ALICE suite of detectors with first modules installed in ALICE this year. The EMCal is designed to trigger on high energy gamma-rays and jets, and to enhance the capabilities of ALICE for these measurements. The EMCal is a Pb/scintillator sampling shish-kebab type calorimeter. The EMCal construction, readout, and performance in beam tests at the CERN SPS and PS are described.

  14. The ALICE Electromagnetic Calorimeter

    SciTech Connect

    Awes, Terry C; ALICE, Collaboration

    2010-05-01

    ALICE is the general purpose experiment at the LHC dedicated to the study of heavy-ion collisions. The electromagnetic calorimeter (EMCal) is a late addition to the ALICE suite of detectors with first modules installed in ALICE this year. The EMCal is designed to trigger on high energy gamma-rays and jets, and to enhance the capabilities of ALICE for these measurements. The EMCal is a Pb/scintillator sampling shish-kebab type calorimeter. The EMCal construction, readout, and performance in beam tests at the CERN SPS and PS are described.

  15. Students as Library Detectives and Books as Clues: An Application of ISD in K-12 Schools

    ERIC Educational Resources Information Center

    Moore, Kimberly J.; Knowlton, Dave S.

    2006-01-01

    Instructional Systems Design (ISD) is the systematic development of instructional strategies that are grounded in both learning and instructional theory. ISD is usually overlooked as a useful methodology in K-12 schools. ISD is extremely expensive in terms of the time required to develop instruction, and it often seems more appropriate as an…

  16. KNOW (Knowledge Network of Wisconsin) and ISD (Information Services Division).

    ERIC Educational Resources Information Center

    Wood, Frances K.

    To make scientific, technical, and management information available to the general populace of Wisconsin, the Information Services Division (ISD) of the Wisconsin Department of Public Instruction undertook a project to establish a one-stop center at the University of Wisconsin that could provide users access to more than a dozen campus libraries.…

  17. AECT and ISD...Can We Expand the Relationship?

    ERIC Educational Resources Information Center

    Kemp, Jerold E.

    2003-01-01

    Suggests that AECT (Association for Educational Communications and Technology) should include ISD (instructional systems design) more clearly in its mission. Highlights include the transition from audiovisual education to information technology; innovative instruction; designing instruction with the use of technology; and the federal government's…

  18. Alice Occultation - Gladstone

    NASA Video Gallery

    This animation shows how the count rate observed by New Horizons’ Alice instrument decreases as Pluto’s atmosphere passes in front of the sun. The decreasing count rate is due to the ultraviolet s...

  19. Dolly and Alice

    PubMed Central

    Burk, Dan L.

    2015-01-01

    The opinion of the United States Court of Appeals for the Federal Circuit, In re Roslin Institute, rejecting patent claims to mammals cloned from somatic cells, was rendered about a month before the United States Supreme Court's decision in Alice Corp. v. CLS Bank International. The Alice opinion explicitly sets out the standard for determining whether an invention falls within statutory patentable subject matter. Thus one is thus left to wonder what the Roslin opinion might have looked like had it been decided only a few weeks later, after the Alice decision was published, with the benefit of the Supreme Court's further direction on patentable subject matter. In this essay I explore whether in hindsight the Alice standard might have dictated a different outcome in Roslin, suggesting how the two-part test articulated by the Supreme Court in Alice might apply to a ‘products of nature’ analysis for cloned mammals. Drawing on that analysis, I then use the Roslin case as a vehicle to highlight certain issues with the Supreme Court's current subject matter jurisprudence as applied to biotechnology. By juxtaposing Dolly with Alice, it becomes clear that the Supreme Court has revivified a number of dormant biotechnology patent problems in the guise of subject matter analysis. PMID:27774214

  20. Organizational Culture and ISD Practices: Comparative Literature Review

    NASA Astrophysics Data System (ADS)

    Ovaska, Päivi; Juvonen, Pasi

    This chapter reports results from a study that aims to analyze and compare the literature related to custom IS, packaged, and open source software organizational cultures, and their systems development practices. The comparative analysis is performed using a framework for organizational culture as lenses to the literature. Our study suggests that the beliefs and values of these three communities of practice differ remarkably and make their organizational culture and systems development practices different. The most important differences were found in business milieu, ISD team efforts, ISD approaches, and products and quality. Based on the study we can question the widely held wisdom of methods, techniques, and tools in systems development and managing its efforts. Our study has several implications for research and practice, which are discussed in this chapter.

  1. The ALICE Electromagnetic Calorimeter

    SciTech Connect

    Gadrat, S.

    2010-06-01

    ALICE (A Large Ion Collider Experiment) is the only LHC experiment at CERN fully dedicated to the study of the quark and gluon plasma. Driven by the RHIC results on jet quenching, the ALICE collaboration has proposed to extend the capabilities of the ALICE detector for the study of high momentum photons and jets by adding a large acceptance calorimeter. This EMCal (ElectroMagnetic Calorimeter) is designed to provide an unbiased fast high-p{sub T} trigger and to measure the neutral energy of jets and photons up to 200 GeV. Four over ten supermodules of the calorimeter have been installed and commissioned at CERN in 2009 which represents 40% of the full acceptance.

  2. MAD - Monitoring ALICE Dataflow

    NASA Astrophysics Data System (ADS)

    Chibante Barroso, V.; Costa, F.; Grigoras, C.; Wegrzynek, A.

    2015-12-01

    ALICE (A Large Ion Collider Experiment) is the heavy-ion detector designed to study the physics of strongly interacting matter and the quark-gluon plasma at the CERN Large Hadron Collider (LHC). Following a successful Run 1, which ended in February 2013, the ALICE data acquisition (DAQ) entered a consolidation phase to prepare for Run 2 which will start in the beginning of 2015. A new software tool has been developed by the data acquisition project to improve the monitoring of the experiment's dataflow, from the data readout in the DAQ farm up to its shipment to CERN's main computer centre. This software, called ALICE MAD (Monitoring ALICE Dataflow), uses the MonALISA framework as core module to gather, process, aggregate and distribute monitoring values from the different processes running in the distributed DAQ farm. Data are not only pulled from the data sources to MAD but can also be pushed by dedicated data collectors or the data source processes. A large set of monitored metrics (from the backpressure status on the readout links to event counters in each of the DAQ nodes and aggregated data rates for the whole data acquisition) is needed to provide a comprehensive view of the DAQ status. MAD also injects alarms in the Orthos alarm system whenever abnormal conditions are detected. The MAD web-based GUI uses WebSockets to provide dynamic and on-time status displays for the ALICE shift crew. Designed as a widget-based system, MAD supports an easy integration of new visualization blocks and also customization of the information displayed to the shift crew based on the ALICE activities.

  3. LYE BROOK WILDERNESS, VERMONT.

    USGS Publications Warehouse

    Ayuso, Robert A.; Harrison, D.K.

    1984-01-01

    The Lye Brook Wilderness, in the Green Mountains of Vermont is underlain by gneisses, quartzites, schists, and amphibolites of Precambrian to Ordovician age. A mineral-resource survey determined that only one commodity, quartzite, is present in large quantities and could be a source of dimension stone or crushed stone. Although an anomalously high radioactive area occurs within the Precambrian basement, geochemical studies indicate little promise for the occurrence of significant uranium mineralization or for the occurrence of other mineral or energy resources within the wilderness,

  4. The ALICE Pixel Detector

    NASA Astrophysics Data System (ADS)

    Mercado-Perez, Jorge

    2002-07-01

    The present document is a brief summary of the performed activities during the 2001 Summer Student Programme at CERN under the Scientific Summer at Foreign Laboratories Program organized by the Particles and Fields Division of the Mexican Physical Society (Sociedad Mexicana de Fisica). In this case, the activities were related with the ALICE Pixel Group of the EP-AIT Division, under the supervision of Jeroen van Hunen, research fellow in this group. First, I give an introduction and overview to the ALICE experiment; followed by a description of wafer probing. A brief summary of the test beam that we had from July 13th to July 25th is given as well.

  5. Alice in Debitland.

    ERIC Educational Resources Information Center

    Board of Governors of the Federal Reserve System, Washington, DC.

    Designed for the general public and possibly suitable also for high school economics students, this booklet examines the Electronic Fund Transfer Act (EFT), which protects consumers who use debit cards for the electronic transfer of funds. This commercially adapted version of the character in "Alice in Wonderland," uses a story-teller approach to…

  6. The Socialization of Virtual Teams: Implications for ISD

    NASA Astrophysics Data System (ADS)

    Mullally, Brenda; Stapleton, Larry

    Studies show that Information Systems Development (ISD) projects do not fulfil stakeholder expectations of completion time, quality and budget. (2005) study shows that development is more about social interaction and mutual understanding than following a prescribed method. Systems development is a social process where interactions help to make sense of the reality within which the system is developed (Hirschheirn et al., 1991). Research concentrates on methodology when in fact method may not be the primary problem. Authors have called for further research to investigate the true nature of the current systems development environment in real organisational situations (Fitzgerald, 2000).

  7. Unique Heme-Iron Coordination by the Hemoglobin Receptor IsdB of Staphylococcus aureus

    PubMed Central

    2011-01-01

    Iron is an essential requirement for life for nearly all organisms. The human pathogen Staphylococcus aureus is able to acquire iron from the heme cofactor of hemoglobin (Hb) released from lysed erythrocytes. IsdB, the predominant Hb receptor of S. aureus, is a cell wall-anchored protein that is composed of two NEAT domains. The N-terminal NEAT domain (IsdB-N1) binds Hb, and the C-terminal NEAT domain (IsdB-N2) relays heme to IsdA for transport into the cell. Here we present the 1.45 Å resolution X-ray crystal structure of the IsdB-N2–heme complex. While the structure largely conforms to the eight-strand β-sandwich fold seen in other NEAT domains such as IsdA-N and uses a conserved Tyr residue to coordinate heme-iron, a Met residue is also involved in iron coordination, resulting in a novel Tyr-Met hexacoordinate heme-iron state. The kinetics of the transfer of heme from IsdB-N2 to IsdA-N can be modeled as a two-step process. The rate of transfer of heme between the isolated NEAT domains (82 s–1) was found to be similar to that measured for the full-length proteins. Replacing the iron coordinating Met with Leu did not abrogate high-affinity heme binding but did reduce the heme transfer rate constant by more than half. This unusual Met-Tyr heme coordination may also bestow properties on IsdB that help it to bind heme in different oxidation states or extract heme from hemoglobin. PMID:21574663

  8. ALICE Expert System

    NASA Astrophysics Data System (ADS)

    Ionita, C.; Carena, F.

    2014-06-01

    The ALICE experiment at CERN employs a number of human operators (shifters), who have to make sure that the experiment is always in a state compatible with taking Physics data. Given the complexity of the system and the myriad of errors that can arise, this is not always a trivial task. The aim of this paper is to describe an expert system that is capable of assisting human shifters in the ALICE control room. The system diagnoses potential issues and attempts to make smart recommendations for troubleshooting. At its core, a Prolog engine infers whether a Physics or a technical run can be started based on the current state of the underlying sub-systems. A separate C++ component queries certain SMI objects and stores their state as facts in a Prolog knowledge base. By mining the data stored in different system logs, the expert system can also diagnose errors arising during a run. Currently the system is used by the on-call experts for faster response times, but we expect it to be adopted as a standard tool by regular shifters during the next data taking period.

  9. DEVELOPMENT OF A SENSOR NETWORK TEST BED FOR ISD MATERIALS AND STRUCUTRAL CONDITION MONITORING

    SciTech Connect

    Zeigler, K.; Ferguson, B.; Karapatakis, D.; Herbst, C.; Stripling, C.

    2011-07-06

    The P Reactor at the Savannah River Site is one of the first reactor facilities in the US DOE complex that has been placed in its end state through in situ decommissioning (ISD). The ISD end state consists of a grout-filled concrete civil structure within the concrete frame of the original building. To evaluate the feasibility and utility of remote sensors to provide verification of ISD system conditions and performance characteristics, an ISD Sensor Network Test Bed has been designed and deployed at the Savannah River National Laboratory. The test bed addresses the DOE-EM Technology Need to develop a remote monitoring system to determine and verify ISD system performance. Commercial off-the-shelf sensors have been installed on concrete blocks taken from walls of the P Reactor Building. Deployment of this low-cost structural monitoring system provides hands-on experience with sensor networks. The initial sensor system consists of: (1) Groutable thermistors for temperature and moisture monitoring; (2) Strain gauges for crack growth monitoring; (3) Tiltmeters for settlement monitoring; and (4) A communication system for data collection. Preliminary baseline data and lessons learned from system design and installation and initial field testing will be utilized for future ISD sensor network development and deployment.

  10. IsdB-dependent hemoglobin binding is required for acquisition of heme by Staphylococcus aureus.

    PubMed

    Pishchany, Gleb; Sheldon, Jessica R; Dickson, Claire F; Alam, Md Tauqeer; Read, Timothy D; Gell, David A; Heinrichs, David E; Skaar, Eric P

    2014-06-01

    Staphylococcus aureus is a Gram-positive pathogen responsible for tremendous morbidity and mortality. As with most bacteria, S. aureus requires iron to cause disease, and it can acquire iron from host hemoglobin. The current model for staphylococcal hemoglobin-iron acquisition proposes that S. aureus binds hemoglobin through the surface-exposed hemoglobin receptor IsdB. IsdB removes heme from bound hemoglobin and transfers this cofactor to other proteins of the Isd system, which import and degrade heme to release iron in the cytoplasm. Here we demonstrate that the individual components of the Isd system are required for growth on low nanomolar concentrations of hemoglobin as a sole source of iron. An in-depth study of hemoglobin binding by IsdB revealed key residues that are required for hemoglobin binding. Further, we show that these residues are necessary for heme extraction from hemoglobin and growth on hemoglobin as a sole iron source. These processes are found to contribute to the pathogenicity of S. aureus in a murine model of infection. Together these results build on the model for Isd-mediated hemoglobin binding and heme-iron acquisition during the pathogenesis of S. aureus infection.

  11. IsdB-dependent Hemoglobin Binding Is Required for Acquisition of Heme by Staphylococcus aureus

    PubMed Central

    Pishchany, Gleb; Sheldon, Jessica R.; Dickson, Claire F.; Alam, Md Tauqeer; Read, Timothy D.; Gell, David A.; Heinrichs, David E.; Skaar, Eric P.

    2014-01-01

    Staphylococcus aureus is a Gram-positive pathogen responsible for tremendous morbidity and mortality. As with most bacteria, S. aureus requires iron to cause disease, and it can acquire iron from host hemoglobin. The current model for staphylococcal hemoglobin-iron acquisition proposes that S. aureus binds hemoglobin through the surface-exposed hemoglobin receptor IsdB. IsdB removes heme from bound hemoglobin and transfers this cofactor to other proteins of the Isd system, which import and degrade heme to release iron in the cytoplasm. Here we demonstrate that the individual components of the Isd system are required for growth on low nanomolar concentrations of hemoglobin as a sole source of iron. An in-depth study of hemoglobin binding by IsdB revealed key residues that are required for hemoglobin binding. Further, we show that these residues are necessary for heme extraction from hemoglobin and growth on hemoglobin as a sole iron source. These processes are found to contribute to the pathogenicity of S. aureus in a murine model of infection. Together these results build on the model for Isd-mediated hemoglobin binding and heme-iron acquisition during the pathogenesis of S. aureus infection. PMID:24338348

  12. Alice in Wonderland syndrome

    PubMed Central

    2016-01-01

    Abstract Purpose of review: To summarize the literature on Alice in Wonderland syndrome (AIWS), a disorder characterized by distortions of visual perception, the body schema, and the experience of time. Recent findings: On the basis of 169 published case descriptions, the etiology of AIWS is divided into 8 main groups, with neurologic disorders affecting mostly adults and elderly patients and encephalitides affecting mostly patients aged ≤18 years. Symptoms of AIWS are also experienced in the general population, with up to 30% of adolescents reporting nonclinical symptoms. Summary: In clinical cases of AIWS, auxiliary investigations (including blood tests, EEG, and brain MRI) are strongly advised. Treatment should be directed at the suspected underlying condition, although reassurance that the symptoms themselves are not harmful seems to suffice in about 50% of the cases. International classifications such as the DSM and ICD should consider placing the syndrome on their research agenda. PMID:27347442

  13. The Alice in Wonderland syndrome.

    PubMed

    Fine, Edward J

    2013-01-01

    The Alice in Wonderland syndrome is a term applied to altered bizarre perceptions of size and shapes of a patient's body and illusions of changes in the forms, dimensions, and motions of objects that a patient with this syndrome encounters. These metamorphopsias arise during complex partial seizures, migraine headaches, infections, and intoxications. The illusions and hallucinations resemble the strange phenomena that Alice experienced in Lewis Carroll's Alice's Adventures in Wonderland. Charles Lutwidge Dodgson, whose nom de plume was Lewis Carroll, experienced metamorphopsias. He described them in the story that he wrote for Alice Liddell and her two sisters after he spun a tale about a long and strange dream that the fictional Alice had on a warm summer day. The author of this chapter suggests that Dodgson suffered from migraine headaches and used these experiences to weave an amusing tale for Alice Liddell. The chapter also discusses the neurology of mercury poisoning affecting the behavior of Mad Hatter character. The author suggests that the ever-somnolent Dormouse suffered from excessive daytime sleepiness due to obstructive sleep apnea. PMID:24290480

  14. Sulfonamide toxicity in brook trout

    USGS Publications Warehouse

    Wood, E.M.; Yasutake, W.T.; Snieszko, S.F.

    1954-01-01

    Sterility was observed in female brook trout that were treated with sulfamerazine at frequent intervals for 2 years to control endemic furunculosis. Feeding sulfamerazine for a period of 8 months caused massive kidney damage similar to that observed in humans who develop allergies to “sulfa” drugs. Kidney damage of the type observed would probably cause renal insufficiency which would handicap any physiological function including reproduction. Feeding sulfonamides for periods up to 13 weeks did not produce kidney damage.

  15. PREFACE: 8th International Symposium of the Digital Earth (ISDE8)

    NASA Astrophysics Data System (ADS)

    2014-02-01

    Proceedings of the 8th International Symposium of Digital Earth (8th ISDE) 2013 Kuching, Sarawak, Malaysia, 26th-29th August, 2013 Conference logo This proceedings consists of the peer-reviewed papers from 8th International Symposium for Digital Earth (ISDE) held in Kuching, Sarawak, Malaysia during 26th-29th August, 2013. The 8th ISDE was a successful event in the Symposium Series of the International Society of Digital Earth, that was previously held in China (1999), Canada (2001), Czech Republic (2003), Japan (2005), the United States (2007), China (2009), and Australia (2011). The 8th ISDE, with the theme 'Transforming Knowledge into Sustainable Practice' aims to enable digital earth scientists, experts and professionals related to the field of geospatial science and technology to provide a brand new opportunity to share their ideas and insights on how we share knowledge and act together globally. In addition, the ISDE symposium series has been providing a venue for researchers and industry practitioners to discuss new ideas, collaborate to solve complex solutions to various complex problems, and importantly, pave new ways in digital earth environment. This 8th ISDE included 20 technical sessions, workshops and student sessions in various areas of digital earth; ranging from digital earth vision & innovation; earth observation technologies; ICT technologies (including spatial data infrastructures); empowering the community and engaging society; applications and innovation of digital earth for environmental applications such as hazard, pollution, flood, air quality, disaster and health, biodiversity, sustainability, forestry, early warning and emergency management, national security, natural resource management and agriculture; mining, energy and resources development; transformation towards sustainable low carbon society; digital city and green cities: towards urban sustainability; and managing water environment for sustainable development. The success of the 8

  16. In Situ Decommissioning (ISD) Concepts and Approaches for Excess Nuclear Facilities Decommissioning End State - 13367

    SciTech Connect

    Serrato, Michael G.; Musall, John C.; Bergren, Christopher L.

    2013-07-01

    The United States Department of Energy (DOE) currently has numerous radiologically contaminated excess nuclear facilities waiting decommissioning throughout the Complex. The traditional decommissioning end state is complete removal. This commonly involves demolishing the facility, often segregating various components and building materials and disposing of the highly contaminated, massive structures containing tons of highly contaminated equipment and piping in a (controlled and approved) landfill, at times hundreds of miles from the facility location. Traditional demolition is costly, and results in significant risks to workers, as well as risks and costs associated with transporting the materials to a disposal site. In situ decommissioning (ISD or entombment) is a viable alternative to demolition, offering comparable and potentially more protective protection of human health and the environment, but at a significantly reduced cost and worker risk. The Savannah River Site (SRS) has completed the initial ISD deployment for radiologically contaminated facilities. Two reactor (P and R Reactors) facilities were decommissioned in 2011 using the ISD approach through the American Recovery and Reinvestment Act. The SRS ISD approach resolved programmatic, regulatory and technical/engineering issues associated with avoiding the potential hazards and cost associated with generating and disposing of an estimated 124,300 metric tons (153,000 m{sup 3}) of contaminated debris per reactor. The DOE Environmental Management Office of Deactivation and Decommissioning and Facility Engineering, through the Savannah River National Laboratory, is currently investigating potential monitoring techniques and strategies to assess ISD effectiveness. As part of SRS's strategic planning, the site is seeking to leverage in situ decommissioning concepts, approaches and facilities to conduct research, design end states, and assist in regulatory interactions in broad national and international

  17. ALICE TPC commissioning results

    NASA Astrophysics Data System (ADS)

    Larsen, D. T.; Alice Tpc Collaboration

    2010-05-01

    ALICE is a dedicated heavy-ion experiment at CERN LHC aiming to study the properties of the quark-gluon plasma. A lead-lead collision might produce several 10 00 new particles. Detailed study of the event requires precise measurements of the particle tracks. A 90 m3 Time Projection Chamber (TPC) with more than 500 000 read-out pads was built as the main central barrel tracker. Collisions can be recorded at a rate of up to about 1 kHz. The front-end electronics, designed from FPGAs and custom ASICs, performs shaping, amplification, digitisation and digital filtering of the signals. The data are forwarded to DAQ via 216 1.25 Gb/s fibre-optical links. Configuration, control and monitoring is done by an embedded Linux system on the front-end electronics. Before production runs with beam, extensive commissioning using tracks from cosmics and from the laser system as well as clusters from radioactive krypton gas is needed. Extensive results have been obtained with respect to the performance of the TPC including its sub-systems.

  18. E APPROACH, FACING W SHOWING PARAPET CURTAILS Stanley Brook ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    E APPROACH, FACING W SHOWING PARAPET CURTAILS - Stanley Brook Bridge, Spanning Stanley Brook, Stanley Brook Motor Road, & Seaside Trail on Barr Hill-Day Mountain Carriage Road, Seal Harbor, Hancock County, ME

  19. Brookings Papers on Education Policy, 2005

    ERIC Educational Resources Information Center

    Ravitch, Diane, Ed.

    2005-01-01

    American education has always had its critics, and undoubtedly always will. Nonetheless, there are signs that the educational environment is improving in unexpected ways. This issue of the Brookings Papers on Education Policy, the eighth volume springing from a series of annual meetings sponsored by the Brookings Institution to examine specific…

  20. "Alice in Wonderland." [Lesson Plan].

    ERIC Educational Resources Information Center

    Heyman, Judith B.

    Based on Lewis Carroll's novel "Alice's Adventures in Wonderland," this lesson plan presents activities designed to help students understand that he used nonsense and absurdity to comment on reality; and that surrealist painters are also known for including absurd elements in their works. The main activity of the lesson involves students…

  1. Alices in a nuclear Wonderland

    NASA Astrophysics Data System (ADS)

    Brown, Kate

    2014-02-01

    Denise Kiernan's The Girls of Atomic City tells the story of a dozen women who left rural America in the early 1940s and tumbled suddenly, like Alice down the rabbit hole, into the nascent US military-industrial complex, with all its regulations, factory discipline, dangers and surveillance.

  2. Alice Views Jupiter and Io

    NASA Technical Reports Server (NTRS)

    2007-01-01

    This graphic illustrates the pointing and shows the data from one of many observations made by the New Horizons Alice ultraviolet spectrometer (UVS) instrument during the Pluto-bound spacecraft's recent encounter with Jupiter. The red lines in the graphic show the scale, orientation, and position of the combined 'box and slot' field of view of the Alice UVS during this observation.

    The positions of Jupiter's volcanic moon, Io, the torus of ionized gas from Io, and Jupiter are shown relative to the Alice field of view. Like a prism, the spectrometer separates light from these targets into its constituent wavelengths.

    Io's volcanoes produce an extremely tenuous atmosphere made up primarily of sulfur dioxide gas, which, in the harsh plasma environment at Io, breaks down into its component sulfur and oxygen atoms. Alice observed the auroral glow from these atoms in Io's atmosphere and their ionized counterparts in the Io torus.

    Io's dayside is deliberately overexposed to bring out faint details in the plumes and on the moon's night side. The continuing eruption of the volcano Tvashtar, at the 1 o'clock position, produces an enormous plume roughly 330 kilometers (200 miles) high, which is illuminated both by sunlight and 'Jupiter light.'

  3. Alice in the Real World

    ERIC Educational Resources Information Center

    Parker, Tom

    2012-01-01

    As a fifth-grade mathematics teacher, the author tries to create authentic problem-solving activities that connect to the world in which his students live. He discovered a natural connection to his students' real world at a computer camp. A friend introduced him to Alice, a computer application developed at Carnegie Mellon, under the leadership of…

  4. An Author Management System and Other Computer-Based Aids to ISD.

    ERIC Educational Resources Information Center

    O'Neal, A. F.

    A brief review of some of the more important needs imposed by current and projected Department of Defense training problems is followed by descriptions of such automated aids as the LAMPS MARK III Weapons System and the Air Force's F-16 Instructional System Development (ISD) effort. These aids have been designed and developed in response to the…

  5. Visibility into the Work: TQM Work Process Analysis with HPT and ISD.

    ERIC Educational Resources Information Center

    Beagles, Charles A.; Griffin, Steven L.

    2003-01-01

    Discusses the use of total quality management (TQM), work process flow diagrams, and ISD (instructional systems development) tools with HPT (human performance technology) to address performance gaps in the Veterans Benefits Administration (VBA). Describes performance goals, which were to improve accuracy and reduce backlog of claim files. (LRW)

  6. Harriet Brooks-Pioneer nuclear scientist

    NASA Astrophysics Data System (ADS)

    Rayner-Canham, M. F.; Rayner-Canham, G. W.

    1989-10-01

    This article, using revealing statements from contemporary correspondence, traces the eventful life of Harriet Brooks, one of Ernest Rutherford's most valued research students and collaborators at McGill University. Brooks performed some of the crucial experiments in the early work on radioactivity; her work led her to the Cavendish where she did work with J. J. Thomson. Still later, she worked with Marie Curie, to whom Rutherford favorably compared her. Despite Brooks' achievements and promise, she finally relinquished her research career when faced with insurmountable objections to women who wished to have both a professional and a married life.

  7. Alice through the double slits

    NASA Astrophysics Data System (ADS)

    Davies, G. G.

    2010-02-01

    Alice thought that she had simply followed the White Rabbit through one of the two slit-like holes, but felt strangely disturbed about whether she had "really" gone through just one hole, or had somehow passed through both holes simultaneously. The Rabbit, who was eating a turnip, was looking her over. "You must be one of those funny-looking things that thinks they know everything," he said. "What are you? A lumpy wave or a wavy lump?" "I don't feel like either," said Alice, "so I must be something entirely different." The Rabbit snorted. "Well, at least you know that," he said. "You might even be ready to learn more."

  8. [The Alice in Wonderland syndrome].

    PubMed

    Cau, C

    1999-10-01

    The "Alice in Wonderland syndrome includes an array of symptoms involving altered perception of shape (meta-morphopsia) of objects or persons who appear to be smaller (micropsia) or larger (macropsia) than normal, of impaired sense of passage of time, of zooming of the environment. This unusual neurological picture which can be confused with psychosis or drug intoxication has been found to accompany cerebral lesions mainly temporo-occipital or parietal-occipital temporal epilepsy and migraine. Todd gave the syndrome its literary name in his report in 1955, describing a singular group of symptoms closely associated with migraine and epilepsy. However the first description of the condition was made by Lippman in 1952. This syndrome is so called because of the resemblance of its symptoms to the fluctuations in size and shape that plague the main character in Lewis Carrol's 1865 novel Alice in Wonderland. Cases of "Alice in Wonderland" syndrome have been described associated with infectious mononucleosis. In each clinical case, the classical infectious mononucleosis symptoms and diagnosis followed the onset of visual aberration. Nuclear medicine techniques are able to demonstrate changes in cerebral perfusion and may be used to detect abnormal cerebral areas in patients with AIWS. PMID:10767914

  9. ALICE detector in construction phase

    NASA Astrophysics Data System (ADS)

    Peryt, Wiktor S.

    2005-09-01

    ALICE1 collaboration, which prepares one of the biggest physics experiments in the history, came into production phase of its detector. The experiment will start at LHC2 at CERN in 2007/2008. In the meantime about 1000 people from ~70 institutions are involved in this enterprise. ALICE detector consists of many sub-detectors, designed and manufactured in many laboratories and commercial firms, located mainly in Europe, but also in U.S., India, China and Korea. To assure appropriate working environment for such a specific task, strictly related to tests of particular components, measurements and assembly procedures Detector Construction Database system has been designed and implemented at CERN and at some labs involved in these activities. In this paper special attention is paid to this topic not only due to fact of innovative approach to the problem. Another reason is the group of young computer scientists (mainly students) from the Warsaw University of Technology, leaded by the author, has designed and developed the system for the whole experiment3. Another very interesting subject is the Data Acquisition System which has to fulfill very hard requirements concerning speed and high bandwidth. Required technical performance is achieved thanks to using PCI bus (usually in previous high energy physics experiments VME standard has been used) and optical links. Very general overview of the whole detector and physics goals of ALICE experiment will also be given.

  10. Genetics Home Reference: Brooke-Spiegler syndrome

    MedlinePlus

    ... skin appendages), such as sweat glands and hair follicles. People with Brooke-Spiegler syndrome may develop several ... develop in sweat glands. Trichoepitheliomas arise from hair follicles. The origin of cylindromas has been unclear; while ...

  11. AmeriFlux US-Bkg Brookings

    SciTech Connect

    Meyers, Tilden

    2016-01-01

    This is the AmeriFlux version of the carbon flux data for the site US-Bkg Brookings. Site Description - The Brookings site is located in a private pasture, consisting of a mixture of C3 and C4 species actively used for grazing. Belonging to the Northern Great Plains Rangelands, the grassland is representative of many in the north central United States, with seasonal winter conditions and a wet growing season.

  12. Structural basis for hemoglobin capture by Staphylococcus aureus cell-surface protein, IsdH.

    PubMed

    Krishna Kumar, Kaavya; Jacques, David A; Pishchany, Gleb; Caradoc-Davies, Tom; Spirig, Thomas; Malmirchegini, G Reza; Langley, David B; Dickson, Claire F; Mackay, Joel P; Clubb, Robert T; Skaar, Eric P; Guss, J Mitchell; Gell, David A

    2011-11-01

    Pathogens must steal iron from their hosts to establish infection. In mammals, hemoglobin (Hb) represents the largest reservoir of iron, and pathogens express Hb-binding proteins to access this source. Here, we show how one of the commonest and most significant human pathogens, Staphylococcus aureus, captures Hb as the first step of an iron-scavenging pathway. The x-ray crystal structure of Hb bound to a domain from the Isd (iron-regulated surface determinant) protein, IsdH, is the first structure of a Hb capture complex to be determined. Surface mutations in Hb that reduce binding to the Hb-receptor limit the capacity of S. aureus to utilize Hb as an iron source, suggesting that Hb sequence is a factor in host susceptibility to infection. The demonstration that pathogens make highly specific recognition complexes with Hb raises the possibility of developing inhibitors of Hb binding as antibacterial agents.

  13. Structural Basis for Hemoglobin Capture by Staphylococcus aureus Cell-surface Protein, IsdH

    PubMed Central

    Krishna Kumar, Kaavya; Jacques, David A.; Pishchany, Gleb; Caradoc-Davies, Tom; Spirig, Thomas; Malmirchegini, G. Reza; Langley, David B.; Dickson, Claire F.; Mackay, Joel P.; Clubb, Robert T.; Skaar, Eric P.; Guss, J. Mitchell; Gell, David A.

    2011-01-01

    Pathogens must steal iron from their hosts to establish infection. In mammals, hemoglobin (Hb) represents the largest reservoir of iron, and pathogens express Hb-binding proteins to access this source. Here, we show how one of the commonest and most significant human pathogens, Staphylococcus aureus, captures Hb as the first step of an iron-scavenging pathway. The x-ray crystal structure of Hb bound to a domain from the Isd (iron-regulated surface determinant) protein, IsdH, is the first structure of a Hb capture complex to be determined. Surface mutations in Hb that reduce binding to the Hb-receptor limit the capacity of S. aureus to utilize Hb as an iron source, suggesting that Hb sequence is a factor in host susceptibility to infection. The demonstration that pathogens make highly specific recognition complexes with Hb raises the possibility of developing inhibitors of Hb binding as antibacterial agents. PMID:21917915

  14. Time-resolved Studies of IsdG Protein Identify Molecular Signposts along the Non-canonical Heme Oxygenase Pathway.

    PubMed

    Streit, Bennett R; Kant, Ravi; Tokmina-Lukaszewska, Monika; Celis, Arianna I; Machovina, Melodie M; Skaar, Eric P; Bothner, Brian; DuBois, Jennifer L

    2016-01-01

    IsdGs are heme monooxygenases that break open the tetrapyrrole, releasing the iron, and thereby allowing bacteria expressing this protein to use heme as a nutritional iron source. Little is currently known about the mechanism by which IsdGs degrade heme, although the products differ from those generated by canonical heme oxygenases. A synthesis of time-resolved techniques, including in proteo mass spectrometry and conventional and stopped-flow UV/visible spectroscopy, was used in conjunction with analytical methods to define the reaction steps mediated by IsdG from Staphylococcus aureus and their time scales. An apparent meso-hydroxyheme (forming with k = 0.6 min(-1), pH 7.4, 10 mm ascorbate, 10 μm IsdG-heme, 22 °C) was identified as a likely common intermediate with the canonical heme oxygenases. Unlike heme oxygenases, this intermediate does not form with added H2O2 nor does it convert to verdoheme and CO. Rather, the next observable intermediates (k = 0.16 min(-1)) were a set of formyloxobilin isomers, similar to the mycobilin products of the IsdG homolog from Mycobacterium tuberculosis (MhuD). These converted in separate fast and slow phases to β-/δ-staphylobilin isomers and formaldehyde (CH2O). Controlled release of this unusual C1 product may support IsdG's dual role as both an oxygenase and a sensor of heme availability in S. aureus. PMID:26534961

  15. Writing siblings: Alice James and her brothers.

    PubMed

    Hoffman, Anne Golomb

    2015-02-01

    This essay addresses the relationship of writing to embodiment, through representations of bodily sensation and fantasy in the journal of Alice James. It considers Alice James's writing in relation to her two writer brothers, William and Henry, and in light of their father's experiences of impairment and breakdown.

  16. Expanding HadISD: quality-controlled, sub-daily station data from 1931

    NASA Astrophysics Data System (ADS)

    Dunn, Robert J. H.; Willett, Kate M.; Parker, David E.; Mitchell, Lorna

    2016-09-01

    HadISD is a sub-daily, station-based, quality-controlled dataset designed to study past extremes of temperature, pressure and humidity and allow comparisons to future projections. Herein we describe the first major update to the HadISD dataset. The temporal coverage of the dataset has been extended to 1931 to present, doubling the time range over which data are provided. Improvements made to the station selection and merging procedures result in 7677 stations being provided in version 2.0.0.2015p of this dataset. The selection of stations to merge together making composites has also been improved and made more robust. The underlying structure of the quality control procedure is the same as for HadISD.1.0.x, but a number of improvements have been implemented in individual tests. Also, more detailed quality control tests for wind speed and direction have been added. The data will be made available as NetCDF files at http://www.metoffice.gov.uk/hadobs/hadisd and updated annually.

  17. Studies for dimuon measurement with ALICE

    SciTech Connect

    Jouan, D.

    1995-07-15

    The idea of measuring dimuon in the ALICE detector is not new, since it already appeared in the Aachen Conference. In the meantime studies were aiming at the use of the two detectors of LHC p-p physics, CMS and ATLAS, already dedicated to dimuon measurement, for these same measurements in heavy ion collisions, whereas the detector dedicated to heavy ions physics at LHC, ALICE, was considering all the other observables. Recently, the interest for dimuon measurements in ALICE was renewed by demands from LHC committee, stiring the activities of a working group in the ALICE collaboration, also associated to a more recent move from new groups. In the following the author briefly describes the interest of measuring dimuons in heavy ion collisions, particularly in ALICE, then the experimental strategy and first estimates of the performances that could be reached with the proposed system.

  18. Naturally occurring IgG antibody levels to the Staphylococcus aureus protein IsdB in humans.

    PubMed

    Zorman, Julie K; Esser, Mark; Raedler, Michael; Kreiswirth, Barry N; Ala'Aldeen, Dlawer A A; Kartsonis, Nicholas; Smugar, Steven S; Anderson, Annaliesa S; McNeely, Tessie; Arduino, Jean Marie

    2013-09-01

    Staphylococcus aureus is a well-recognized, clinically important cause of nosocomial infections, and as such, a vaccine to prevent S. aureus infections would be an important achievement. A Phase IIB/III study of V710, a vaccine containing iron-regulated surface determinant B (IsdB), demonstrated significant sero-conversion rates in cardiovascular surgery patients following a single pre-surgery immunization. However, the vaccine was not efficacious in preventing bacteremia or deep sternal wound infection post-surgery, thus raising the possibility that IsdB might not be available for immune recognition during infection. The purpose of the work described herein was to evaluate and quantify the naturally occurring anti-IsdB levels at baseline and over time during infection, to understand whether IsdB is expressed during a S. aureus infection in hospitalized non-vaccinated patients. We evaluated baseline and follow-up titers in 3 populations: (1) healthy subjects, (2) hospitalized patients with non-S. aureus infections, and (3) hospitalized patients with S. aureus infections. Baseline anti-IsdB levels generally overlapped between the 3 groups, but were highly variable within each group. In healthy subjects, baseline and follow-up levels were highly correlated (Spearman's rho = 0.93), and the geometric mean fold-rise (GMFR) in anti-IsdB levels between study entry and last value was 0.9-fold (95% confidence interval (CI): 0.8 to 1.0 ; p = 0.09), showing no trend over time. The convalescent GMFR in anti-IsdB levels from baseline was 1.7-fold (95% CI: 1.3 to 2.2, p = 0.0008) during S. aureus infection, significantly different from the 1.0-fold GMFR (95% CI: 0.9-1.2, p = 0.60) in non-S. aureus infection, p = 0.005. Additionally, S. aureus isolates (51) obtained from the hospitalized patient group expressed the IsdB protein in vitro. Collectively, these data suggest that IsdB expression levels rise substantially following infection with S. aureus, but not with other pathogens

  19. Diffraction Physics with ALICE at the LHC

    NASA Astrophysics Data System (ADS)

    Evdokimov, Sergey

    2015-06-01

    The ALICE experiment is equipped with a wide range of detectors providing excellent tracking and particle identification in the central region, as well as forward detectors with extended pseudorapidity coverage, which are well suited for studying diffractive processes. Cross section measurements of single and double diffractive processes performed by ALICE in pp collisions at √ {s} = 0.9, ; 2.76, ; 7 ; {textrm{TeV}} will be reported. Currently, ALICE is studying double-gap events in pp collisions at √ {s} = 7 ; {textrm{TeV}}, which give an insight into the central diffraction processes: current status and future perspectives will be discussed. The upgrade plans for diffraction studies, further extending the pseudorapidity acceptance of the ALICE setup for the forthcoming Run 2 of the LHC, will be outlined.

  20. Structure of the hemoglobin-IsdH complex reveals the molecular basis of iron capture by Staphylococcus aureus.

    PubMed

    Dickson, Claire F; Kumar, Kaavya Krishna; Jacques, David A; Malmirchegini, G Reza; Spirig, Thomas; Mackay, Joel P; Clubb, Robert T; Guss, J Mitchell; Gell, David A

    2014-03-01

    Staphylococcus aureus causes life-threatening disease in humans. The S. aureus surface protein iron-regulated surface determinant H (IsdH) binds to mammalian hemoglobin (Hb) and extracts heme as a source of iron, which is an essential nutrient for the bacteria. However, the process of heme transfer from Hb is poorly understood. We have determined the structure of IsdH bound to human Hb by x-ray crystallography at 4.2 Å resolution, revealing the structural basis for heme transfer. One IsdH molecule is bound to each α and β Hb subunit, suggesting that the receptor acquires iron from both chains by a similar mechanism. Remarkably, two near iron transporter (NEAT) domains in IsdH perform very different functions. An N-terminal NEAT domain binds α/β globin through a site distant from the globin heme pocket and, via an intervening structural domain, positions the C-terminal heme-binding NEAT domain perfectly for heme transfer. These data, together with a 2.3 Å resolution crystal structure of the isolated N-terminal domain bound to Hb and small-angle x-ray scattering of free IsdH, reveal how multiple domains of IsdH cooperate to strip heme from Hb. Many bacterial pathogens obtain iron from human hemoglobin using proteins that contain multiple NEAT domains and other domains whose functions are poorly understood. Our results suggest that, rather than acting as isolated units, NEAT domains may be integrated into higher order architectures that employ multiple interaction interfaces to efficiently extract heme from host proteins.

  1. Structure of the Hemoglobin-IsdH Complex Reveals the Molecular Basis of Iron Capture by Staphylococcus aureus*♦

    PubMed Central

    Dickson, Claire F.; Kumar, Kaavya Krishna; Jacques, David A.; Malmirchegini, G. Reza; Spirig, Thomas; Mackay, Joel P.; Clubb, Robert T.; Guss, J. Mitchell; Gell, David A.

    2014-01-01

    Staphylococcus aureus causes life-threatening disease in humans. The S. aureus surface protein iron-regulated surface determinant H (IsdH) binds to mammalian hemoglobin (Hb) and extracts heme as a source of iron, which is an essential nutrient for the bacteria. However, the process of heme transfer from Hb is poorly understood. We have determined the structure of IsdH bound to human Hb by x-ray crystallography at 4.2 Å resolution, revealing the structural basis for heme transfer. One IsdH molecule is bound to each α and β Hb subunit, suggesting that the receptor acquires iron from both chains by a similar mechanism. Remarkably, two near iron transporter (NEAT) domains in IsdH perform very different functions. An N-terminal NEAT domain binds α/β globin through a site distant from the globin heme pocket and, via an intervening structural domain, positions the C-terminal heme-binding NEAT domain perfectly for heme transfer. These data, together with a 2.3 Å resolution crystal structure of the isolated N-terminal domain bound to Hb and small-angle x-ray scattering of free IsdH, reveal how multiple domains of IsdH cooperate to strip heme from Hb. Many bacterial pathogens obtain iron from human hemoglobin using proteins that contain multiple NEAT domains and other domains whose functions are poorly understood. Our results suggest that, rather than acting as isolated units, NEAT domains may be integrated into higher order architectures that employ multiple interaction interfaces to efficiently extract heme from host proteins. PMID:24425866

  2. The Eukaryotic-Specific ISD11 Is a Complex-Orphan Protein with Ability to Bind the Prokaryotic IscS.

    PubMed

    Yan, Robert; Friemel, Martin; Aloisi, Claudia; Huynen, Martijn; Taylor, Ian A; Leimkühler, Silke; Pastore, Annalisa

    2016-01-01

    The eukaryotic protein Isd11 is a chaperone that binds and stabilizes the central component of the essential metabolic pathway responsible for formation of iron-sulfur clusters in mitochondria, the desulfurase Nfs1. Little is known about the exact role of Isd11. Here, we show that human Isd11 (ISD11) is a helical protein which exists in solution as an equilibrium between monomer, dimeric and tetrameric species when in the absence of human Nfs1 (NFS1). We also show that, surprisingly, recombinant ISD11 expressed in E. coli co-purifies with the bacterial orthologue of NFS1, IscS. Binding is weak but specific suggesting that, despite the absence of Isd11 sequences in bacteria, there is enough conservation between the two desulfurases to retain a similar mode of interaction. This knowledge may inform us on the conservation of the mode of binding of Isd11 to the desulfurase. We used evolutionary evidence to suggest Isd11 residues involved in the interaction. PMID:27427956

  3. The Eukaryotic-Specific ISD11 Is a Complex-Orphan Protein with Ability to Bind the Prokaryotic IscS

    PubMed Central

    Yan, Robert; Friemel, Martin; Aloisi, Claudia; Huynen, Martijn; Taylor, Ian A.; Leimkühler, Silke; Pastore, Annalisa

    2016-01-01

    The eukaryotic protein Isd11 is a chaperone that binds and stabilizes the central component of the essential metabolic pathway responsible for formation of iron-sulfur clusters in mitochondria, the desulfurase Nfs1. Little is known about the exact role of Isd11. Here, we show that human Isd11 (ISD11) is a helical protein which exists in solution as an equilibrium between monomer, dimeric and tetrameric species when in the absence of human Nfs1 (NFS1). We also show that, surprisingly, recombinant ISD11 expressed in E. coli co-purifies with the bacterial orthologue of NFS1, IscS. Binding is weak but specific suggesting that, despite the absence of Isd11 sequences in bacteria, there is enough conservation between the two desulfurases to retain a similar mode of interaction. This knowledge may inform us on the conservation of the mode of binding of Isd11 to the desulfurase. We used evolutionary evidence to suggest Isd11 residues involved in the interaction. PMID:27427956

  4. Deadly Outbreak of Iron Storage Disease (ISD) in Italian Birds of the Family Turdidae

    PubMed Central

    PAVONE, Silvia; SALAMIDA, Sonia; PECORELLI, Ivan; ROSSI, Elisabetta; MANUALI, Elisabetta

    2014-01-01

    ABSTRACT A widespread deadly outbreak occurred in captive birds belonging to the family Turdidae in Italy. The present study was performed on 46 dead birds coming from 3 small decoy-bird breeders in central Italy. Only Turdus pilaris, Turdus iliacus, Turdus philomelos and Turdus merula were affected. No other species of bird held by these breeders died. A change of diet before the hunting season was reported from all breeders. Full necropsy of the animals and histological investigations of representative tissue samples were performed. Microscopical examination showed marked iron deposits in liver samples. Bacteriological investigations and molecular analysis to exclude bacterial and viral diseases were carried out. Contamination of food pellet samples by mycotoxins and analysis to detect heavy metal contaminants in food pellet samples were considered. An interesting result was the high iron content found in food pellets. It was higher than that considered suitable for birds, especially for species susceptible to development iron storage disease (ISD). Taken together, the results suggested an outbreak of ISD caused by the high iron content of food given to the birds before the hunting season. The high mortality recorded only in species belonging to the family Turdidae suggests a genetic predisposition in the affected birds. PMID:24920545

  5. Deadly outbreak of iron storage disease (ISD) in Italian birds of the family Turdidae.

    PubMed

    Pavone, Silvia; Salamida, Sonia; Pecorelli, Ivan; Rossi, Elisabetta; Manuali, Elisabetta

    2014-09-01

    A widespread deadly outbreak occurred in captive birds belonging to the family Turdidae in Italy. The present study was performed on 46 dead birds coming from 3 small decoy-bird breeders in central Italy. Only Turdus pilaris, Turdus iliacus, Turdus philomelos and Turdus merula were affected. No other species of bird held by these breeders died. A change of diet before the hunting season was reported from all breeders. Full necropsy of the animals and histological investigations of representative tissue samples were performed. Microscopical examination showed marked iron deposits in liver samples. Bacteriological investigations and molecular analysis to exclude bacterial and viral diseases were carried out. Contamination of food pellet samples by mycotoxins and analysis to detect heavy metal contaminants in food pellet samples were considered. An interesting result was the high iron content found in food pellets. It was higher than that considered suitable for birds, especially for species susceptible to development iron storage disease (ISD). Taken together, the results suggested an outbreak of ISD caused by the high iron content of food given to the birds before the hunting season. The high mortality recorded only in species belonging to the family Turdidae suggests a genetic predisposition in the affected birds.

  6. Which Dreamed It? Two Children, Philosophy, and Alice.

    ERIC Educational Resources Information Center

    Lowe, Virginia

    1994-01-01

    Explores the possible responses that contemporary children experience in reading "Alice in Wonderland." Describes "Alice" as an ideal text for involving children in complex philosophical issues. Outlines how such an aim is was carried out with different children. (HB)

  7. Harriet Brooks: Canada's First Woman Physicist

    NASA Astrophysics Data System (ADS)

    Rayner-Canham, Geoffrey

    2004-03-01

    During those early halcyon days of the study of radioactivity, one young Canadian woman, Harriet Brooks, joined Ernest Rutherford's group as his first research student. Later, she joined J.J. Thomson's group in Cambridge and, finally, Marie Curie's group in Paris. During her short research career, she made several important contributions to science. She investigated the nature of 'emanation' from radium; discovered that radioactive substances could undergo successive decay; and first reported the recoil of the radioactive atom. Much of this research was published under her name alone though Rutherford made extensive reference to her discoveries in his Bakerian lecture of 1904. Brooks life is of interest not only in what she accomplished, but also in the challenges she faced as a pioneering woman scientist in the early part of the twentieth century. In the presentation we will blend the account of her life and work with the societal context. This work was accomplished jointly with Marelene F. Rayner-Canham.

  8. Through the Looking Glass and What Alice Ate There.

    ERIC Educational Resources Information Center

    Yee, Gordon T.

    2002-01-01

    In the book, 'Through the Looking Glass and What Alice Found There', Alice walks through a mirror into a mirror-image world. Assuming that she is not changed by this transition, her enzymes are still only capable of processing molecules of the handedness of her native world. So the question is, what can Alice eat in the mirror-image world that…

  9. Archives Library Information Center (ALIC) Notes, 1989-1992.

    ERIC Educational Resources Information Center

    ALIC Notes, 1992

    1992-01-01

    The Archives Library Information Center (ALIC) within the National Archives and Records Administration (NARA) collects printed material on archives, manuscripts, and records management. ALIC compiles a database of these materials, sources of archival services and supplies, and information on significant archival projects. "ALIC Notes" is a brief…

  10. The ALICE Central Trigger Processor (CTP) upgrade

    NASA Astrophysics Data System (ADS)

    Krivda, M.; Alexandre, D.; Barnby, L. S.; Evans, D.; Jones, P. G.; Jusko, A.; Lietava, R.; Pospíšil, J.; Villalobos Baillie, O.

    2016-03-01

    The ALICE Central Trigger Processor (CTP) at the CERN LHC has been upgraded for LHC Run 2, to improve the Transition Radiation Detector (TRD) data-taking efficiency and to improve the physics performance of ALICE. There is a new additional CTP interaction record sent using a new second Detector Data Link (DDL), a 2 GB DDR3 memory and an extension of functionality for classes. The CTP switch has been incorporated directly onto the new LM0 board. A design proposal for an ALICE CTP upgrade for LHC Run 3 is also presented. Part of the development is a low latency high bandwidth interface whose purpose is to minimize an overall trigger latency.

  11. Aquarius's Instrument Science Data System (ISDS) Automated to Acquire, Process, Trend Data and Produce Radiometric System Assessment Reports

    NASA Technical Reports Server (NTRS)

    2008-01-01

    The Aquarius Radiometer, a subsystem of the Aquarius Instrument required a data acquisition ground system to support calibration and radiometer performance assessment. To support calibration and compose performance assessments, we developed an automated system which uploaded raw data to a ftp server and saved raw and processed data to a database. This paper details the overall functionalities of the Aquarius Instrument Science Data System (ISDS) and the individual electrical ground support equipment (EGSE) which produced data files that were infused into the ISDS. Real time EGSEs include an ICDS Simulator, Calibration GSE, Labview controlled power supply, and a chamber data acquisition system. ICDS Simulator serves as a test conductor primary workstation, collecting radiometer housekeeping (HK) and science data and passing commands and HK telemetry collection request to the radiometer. Calibration GSE (Radiometer Active Test Source) provides source choice from multiple targets for the radiometer external calibration. Power Supply GSE, controlled by labview, provides real time voltage and current monitoring of the radiometer. And finally the chamber data acquisition system produces data reflecting chamber vacuum pressure, thermistor temperatures, AVG and watts. Each GSE system produce text based data files every two to six minutes and automatically copies the data files to the Central Archiver PC. The Archiver PC stores the data files, schedules automated uploads of these files to an external FTP server, and accepts request to copy all data files to the ISDS for offline data processing and analysis. Aquarius Radiometer ISDS contains PHP and MATLab programs to parse, process and save all data to a MySQL database. Analysis tools (MATLab programs) in the ISDS system are capable of displaying radiometer science, telemetry and auxiliary data in near real time as well as performing data analysis and producing automated performance assessment reports of the Aquarius

  12. MALDI-ISD Mass Spectrometry Analysis of Hemoglobin Variants: a Top-Down Approach to the Characterization of Hemoglobinopathies

    NASA Astrophysics Data System (ADS)

    Théberge, Roger; Dikler, Sergei; Heckendorf, Christian; Chui, David H. K.; Costello, Catherine E.; McComb, Mark E.

    2015-08-01

    Hemoglobinopathies are the most common inherited disorders in humans and are thus the target of screening programs worldwide. Over the past decade, mass spectrometry (MS) has gained a more important role as a clinical means to diagnose variants, and a number of approaches have been proposed for characterization. Here we investigate the use of matrix-assisted laser desorption/ionization time-of-flight MS (MALDI-TOF MS) with sequencing using in-source decay (MALDI-ISD) for the characterization of Hb variants. We explored the effect of matrix selection using super DHB or 1,5-diaminonaphthalene on ISD fragment ion yield and distribution. MALDI-ISD MS of whole blood using super DHB simultaneously provided molecular weights for the alpha and beta chains, as well as extensive fragmentation in the form of sequence defining c-, (z + 2)-, and y-ion series. We observed sequence coverage on the first 70 amino acids positions from the N- and C-termini of the alpha and beta chains in a single experiment. An abundant beta chain N-terminal fragment ion corresponding to βc34 was determined to be a diagnostic marker ion for Hb S (β6 Glu→Val, sickle cell), Hb C (β6 Glu→Lys), and potentially for Hb E (β26 Glu→Lys). The MALDI-ISD analysis of Hb S and HbSC yielded mass shifts corresponding to the variants, demonstrating the potential for high-throughput screening. Characterization of an alpha chain variant, Hb Westmead (α122 His→Gln), generated fragments that established the location of the variant. This study is the first clinical application of MALDI-ISD MS for the determination and characterization of hemoglobin variants.

  13. Literary neurologic syndromes. Alice in Wonderland.

    PubMed

    Rolak, L A

    1991-06-01

    Many neurologic syndromes are named for literary characters. For example, the "Alice in Wonderland" syndrome of altered body perceptions, usually caused by migrainous ischemia, is so called because of the resemblance of its symptoms to the fluctuations in size and shape that plague the main character in Lewis Carroll's 1865 novel Alice in Wonderland. The medical symptoms of distorted body images match the literary description so precisely that illustrations from the original book depict them very accurately. Because Lewis Carroll suffered from classic migraine headaches, scholars have speculated that he may have experienced this syndrome himself. PMID:2039389

  14. The Mathematics of "Alice's Adventures in Wonderland"

    ERIC Educational Resources Information Center

    Taber, Susan B.

    2005-01-01

    The mathematician Charles Dodgson delighted in creating mathematical puzzles for his friends and students. This article describes some items that he included in "Alice's Adventures in Wonderland" and explores ways of helping students become aware of the mathematics in the book. (Contains 6 figures.)

  15. Playing around in Lewis Carroll's "Alice" Books

    ERIC Educational Resources Information Center

    Susina, Jan

    2010-01-01

    Mathematician Charles Dodgson's love of play and his need for rules came together in his use of popular games as part of the structure of the two famous children's books, "Alice in Wonderland" and "Through the Looking-Glass," he wrote under the pseudonym Lewis Carroll. The author of this article looks at the interplay between…

  16. The World Wide Web: Alice Meets Cyberspace.

    ERIC Educational Resources Information Center

    Koos, Marybeth; Smith-Shank, Deborah L.

    1996-01-01

    Uses excerpts from "Alice In Wonderland" as introductions to a tour of the uses of the World Wide Web in art education. Discusses such issues as access, copyrights, costs, and benefits. Includes an index of terms, list of related Websites, and suggested teaching activities. (MJP)

  17. Alice, Greenfoot, and Scratch--A Discussion

    ERIC Educational Resources Information Center

    Utting, Ian; Cooper, Stephen; Kolling, Michael; Maloney, John; Resnick, Mitchel

    2010-01-01

    This article distills a discussion about the goals, mechanisms, and effects of three environments which aim to support the acquisition and development of computing concepts (problem solving and programming) in pre-University and non-technical students: Alice, Greenfoot, and Scratch. The conversation started in a special session on the topic at the…

  18. Evaluation of LLNL-ALICE code contribution

    SciTech Connect

    Blann, M.

    1994-03-24

    We summarize some of the areas of comparison with experimental data for which the ALICE code did poorly. We suggest some aspects which might be improved in the future. A crude accuracy factor is estimated as a predictive reliability based on the intercomparison exercise.

  19. Strangeness detection in ALICE experiment at LHC

    SciTech Connect

    Safarik, K.

    1995-07-15

    The authors present some parameters of the ALICE detector which concern the detection of strange particles. The results of a simulation for neutral strange particles and cascades, together with estimated rates are presented. They also briefly discuss the detection of charged K-mesons. Finally, they mention the possibility of open charm particle detection.

  20. Alice Munro: "Wild Swans" and Things.

    ERIC Educational Resources Information Center

    Raabe, David

    2001-01-01

    Discusses how to analyze short stories by Alice Munro. Explains importance of metonymy in reading and teaching these stories. Suggests that the endings of Munro's stories should be examined closely. Concludes that teaching Munro's stories in this way brings students to a greater understanding of her stories. (PM)

  1. 33 CFR 117.202 - Cold Spring Brook.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Cold Spring Brook. 117.202 Section 117.202 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Connecticut § 117.202 Cold Spring Brook. The draw...

  2. 33 CFR 117.202 - Cold Spring Brook.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Cold Spring Brook. 117.202 Section 117.202 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Connecticut § 117.202 Cold Spring Brook. The draw...

  3. 33 CFR 117.202 - Cold Spring Brook.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Cold Spring Brook. 117.202 Section 117.202 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Connecticut § 117.202 Cold Spring Brook. The draw...

  4. 33 CFR 117.202 - Cold Spring Brook.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Cold Spring Brook. 117.202 Section 117.202 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Connecticut § 117.202 Cold Spring Brook. The draw...

  5. 33 CFR 117.202 - Cold Spring Brook.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Cold Spring Brook. 117.202 Section 117.202 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Connecticut § 117.202 Cold Spring Brook. The draw...

  6. Cretaceous Olistostrome Model, Brooks Range, Alaska

    SciTech Connect

    Crane, R.C.

    1985-04-01

    The foothills area of the Brooks Range thrust belt in the area between the Itkillik River and the Etivluk River is composed dominantly of shallow, thrusted olistostrome sheets. Three olistostrome units can be recognized based on the dominant lithology of contained olistoliths and age of the matrix shales. The lower unit is Thithonian to mid-Valanginian in age and is characterized by abundant graywacke and turbidite, mafic rocks, black cherts, olistoliths of Norian-Rhaetic shales, Nuka sands, and glide sheets of Upper Devonian to Lower Mississippian rocks. Olistolights were derived from the Misheguk, Ipnavik, and Nuka Ridge allochthonous sequences. The middle unit is of late Valanginian age and has olistoliths of Norian shales; more abundant Upper Triassic chert; Otuk Formation; variegated, radiolarian, black and white cherts; Siksikpuk facies red, green and black shales; Upper Jurassic graywacke; and minor occurrences of mafic rocks. The unit is characterized by glide sheets of Triassic white and multicolor cherts. Olistoliths are derived from Nuka Ridge and Brooks Range sequences. The upper unit is Hauterivian in age and olistoliths included reworked material from all older units. Olistoliths are few and widely scattered. Isolated outcrops of white chert and conglomerate boulders are characteristic.

  7. Brook trout passage performance through culverts

    USGS Publications Warehouse

    Goerig, Elsa; Castro-Santos, Theodore R.; Bergeron, Normand

    2016-01-01

    Culverts can restrict access to habitat for stream-dwelling fishes. We used passive integrated transponder telemetry to quantify passage performance of >1000 wild brook trout (Salvelinus fontinalis) attempting to pass 13 culverts in Quebec under a range of hydraulic and environmental conditions. Several variables influenced passage success, including complex interactions between physiology and behavior, hydraulics, and structural characteristics. The probability of successful passage was greater through corrugated metal culverts than through smooth ones, particularly among smaller fish. Trout were also more likely to pass at warmer temperatures, but this effect diminished above 15 °C. Passage was impeded at higher flows, through culverts with steep slopes, and those with deep downstream pools. This study provides insight on factors influencing brook trout capacity to pass culverts as well as a model to estimate passage success under various conditions, with an improved resolution and accuracy over existing approaches. It also presents methods that could be used to investigate passage success of other species, with implications for connectivity of the riverscape.

  8. Competing for Iron: Duplication and Amplification of the isd Locus in Staphylococcus lugdunensis HKU09-01 Provides a Competitive Advantage to Overcome Nutritional Limitation

    PubMed Central

    Heilbronner, Simon; Brozyna, Jeremy R.; Heinrichs, David E.; Skaar, Eric P.; Peschel, Andreas; Foster, Timothy J.

    2016-01-01

    Staphylococcus lugdunensis is a coagulase negative bacterial pathogen that is particularly associated with severe cases of infectious endocarditis. Unique amongst the coagulase-negative staphylococci, S. lugdunensis harbors an iron regulated surface determinant locus (isd). This locus facilitates the acquisition of heme as a source of nutrient iron during infection and allows iron limitation caused by “nutritional immunity” to be overcome. The isd locus is duplicated in S. lugdunensis HKU09-01 and we show here that the duplication is intrinsically unstable and undergoes accordion-like amplification and segregation leading to extensive isd copy number variation. Amplification of the locus increased the level of expression of Isd proteins and improved binding of hemoglobin to the cell surface of S. lugdunensis. Furthermore, Isd overexpression provided an advantage when strains were competing for a limited amount of hemoglobin as the sole source of iron. Gene duplications and amplifications (GDA) are events of fundamental importance for bacterial evolution and are frequently associated with antibiotic resistance in many species. As such, GDAs are regarded as evolutionary adaptions to novel selective pressures in hostile environments pointing towards a special importance of isd for S. lugdunensis. For the first time we show an example of a GDA that involves a virulence factor of a Gram-positive pathogen and link the GDA directly to a competitive advantage when the bacteria were struggling with selective pressures mimicking “nutritional immunity”. PMID:27575058

  9. Competing for Iron: Duplication and Amplification of the isd Locus in Staphylococcus lugdunensis HKU09-01 Provides a Competitive Advantage to Overcome Nutritional Limitation.

    PubMed

    Heilbronner, Simon; Monk, Ian R; Brozyna, Jeremy R; Heinrichs, David E; Skaar, Eric P; Peschel, Andreas; Foster, Timothy J

    2016-08-01

    Staphylococcus lugdunensis is a coagulase negative bacterial pathogen that is particularly associated with severe cases of infectious endocarditis. Unique amongst the coagulase-negative staphylococci, S. lugdunensis harbors an iron regulated surface determinant locus (isd). This locus facilitates the acquisition of heme as a source of nutrient iron during infection and allows iron limitation caused by "nutritional immunity" to be overcome. The isd locus is duplicated in S. lugdunensis HKU09-01 and we show here that the duplication is intrinsically unstable and undergoes accordion-like amplification and segregation leading to extensive isd copy number variation. Amplification of the locus increased the level of expression of Isd proteins and improved binding of hemoglobin to the cell surface of S. lugdunensis. Furthermore, Isd overexpression provided an advantage when strains were competing for a limited amount of hemoglobin as the sole source of iron. Gene duplications and amplifications (GDA) are events of fundamental importance for bacterial evolution and are frequently associated with antibiotic resistance in many species. As such, GDAs are regarded as evolutionary adaptions to novel selective pressures in hostile environments pointing towards a special importance of isd for S. lugdunensis. For the first time we show an example of a GDA that involves a virulence factor of a Gram-positive pathogen and link the GDA directly to a competitive advantage when the bacteria were struggling with selective pressures mimicking "nutritional immunity". PMID:27575058

  10. Alice and Bob in an expanding spacetime

    NASA Astrophysics Data System (ADS)

    Alexander, Helder; de Souza, Gustavo; Mansfield, Paul; Sampaio, Marcos

    2015-09-01

    We investigate the teleportation of a qubit between two observers Alice and Bob in an asymptotically flat Robertson-Walker expanding spacetime. We use scalar or fermionic field modes inside Alice's and Bob's ideal cavities and show the degradation of the teleportation quality, as measured by the fidelity, through a mechanism governed by spacetime expansion. This reduction is demonstrated to increase with the rapidity of the expansion and to be highly sensitive to the coupling of the field to spacetime curvature, becoming considerably stronger as it reduces from conformal to minimal. We explore a perturbative approach in the cosmological parameters to compute the Bogoliubov coefficients in order to evaluate and compare the fidelity degradation of fermionic and scalar fields.

  11. Estimation of peptide N-Cα bond cleavage efficiency during MALDI-ISD using a cyclic peptide.

    PubMed

    Asakawa, Daiki; Smargiasso, Nicolas; De Pauw, Edwin

    2016-05-01

    Matrix-assisted laser desorption/ionization in-source decay (MALDI-ISD) induces N-Cα bond cleavage via hydrogen transfer from the matrix to the peptide backbone, which produces a c'/z• fragment pair. Subsequently, the z• generates z' and [z + matrix] fragments via further radical reactions because of the low stability of the z•. In the present study, we investigated MALDI-ISD of a cyclic peptide. The N-Cα bond cleavage in the cyclic peptide by MALDI-ISD produced the hydrogen-abundant peptide radical [M + 2H](+) • with a radical site on the α-carbon atom, which then reacted with the matrix to give [M + 3H](+) and [M + H + matrix](+) . For 1,5-diaminonaphthalene (1,5-DAN) adducts with z fragments, post-source decay of [M + H + 1,5-DAN](+) generated from the cyclic peptide showed predominant loss of an amino acid with 1,5-DAN. Additionally, MALDI-ISD with Fourier transform-ion cyclotron resonance mass spectrometry allowed for the detection of both [M + 3H](+) and [M + H](+) with two (13) C atoms. These results strongly suggested that [M + 3H](+) and [M + H + 1,5-DAN](+) were formed by N-Cα bond cleavage with further radical reactions. As a consequence, the cleavage efficiency of the N-Cα bond during MALDI-ISD could be estimated by the ratio of the intensity of [M + H](+) and [M + 3H](+) in the Fourier transform-ion cyclotron resonance spectrum. Because the reduction efficiency of a matrix for the cyclic peptide cyclo(Arg-Gly-Asp-D-Phe-Val) was correlated to its tendency to cleave the N-Cα bond in linear peptides, the present method could allow the evaluation of the efficiency of N-Cα bond cleavage for MALDI matrix development. Copyright © 2016 John Wiley & Sons, Ltd. PMID:27194516

  12. Performance optimisations for distributed analysis in ALICE

    NASA Astrophysics Data System (ADS)

    Betev, L.; Gheata, A.; Gheata, M.; Grigoras, C.; Hristov, P.

    2014-06-01

    Performance is a critical issue in a production system accommodating hundreds of analysis users. Compared to a local session, distributed analysis is exposed to services and network latencies, remote data access and heterogeneous computing infrastructure, creating a more complex performance and efficiency optimization matrix. During the last 2 years, ALICE analysis shifted from a fast development phase to the more mature and stable code. At the same time, the frameworks and tools for deployment, monitoring and management of large productions have evolved considerably too. The ALICE Grid production system is currently used by a fair share of organized and individual user analysis, consuming up to 30% or the available resources and ranging from fully I/O-bound analysis code to CPU intensive correlations or resonances studies. While the intrinsic analysis performance is unlikely to improve by a large factor during the LHC long shutdown (LS1), the overall efficiency of the system has still to be improved by an important factor to satisfy the analysis needs. We have instrumented all analysis jobs with "sensors" collecting comprehensive monitoring information on the job running conditions and performance in order to identify bottlenecks in the data processing flow. This data are collected by the MonALISa-based ALICE Grid monitoring system and are used to steer and improve the job submission and management policy, to identify operational problems in real time and to perform automatic corrective actions. In parallel with an upgrade of our production system we are aiming for low level improvements related to data format, data management and merging of results to allow for a better performing ALICE analysis.

  13. First Run II results from ALICE

    NASA Astrophysics Data System (ADS)

    Toia, Alberica

    2016-07-01

    The ALICE Collaboration is collecting data with both Minimum Bias and Muon triggers with pp collisions at √s = 13 TeV in the ongoing LHC Run II. An excellent performance of tracking and PID in the central barrel and in the muon spectrometer has been obtained. First results on the charged-particle pseudorapidity density and on identified particle transverse momentum spectra at √s = 13 TeV is presented.

  14. Overview of anisotropic flow measurements from ALICE

    NASA Astrophysics Data System (ADS)

    Zhou, You

    2016-05-01

    Anisotropic flow is an important observable to study the properties of the hot and dense matter, the Quark Gluon Plasma (QGP), created in heavy-ion collisions. Measurements of anisotropic flow for inclusive and identified charged hadrons are reported in Pb-Pb, p-Pb and pp collisions with the ALICE detector. The comparison of experimental measurements to various theoretical calculations are also presented in these proceedings.

  15. The ALICE Software Release Validation cluster

    NASA Astrophysics Data System (ADS)

    Berzano, D.; Krzewicki, M.

    2015-12-01

    One of the most important steps of software lifecycle is Quality Assurance: this process comprehends both automatic tests and manual reviews, and all of them must pass successfully before the software is approved for production. Some tests, such as source code static analysis, are executed on a single dedicated service: in High Energy Physics, a full simulation and reconstruction chain on a distributed computing environment, backed with a sample “golden” dataset, is also necessary for the quality sign off. The ALICE experiment uses dedicated and virtualized computing infrastructures for the Release Validation in order not to taint the production environment (i.e. CVMFS and the Grid) with non-validated software and validation jobs: the ALICE Release Validation cluster is a disposable virtual cluster appliance based on CernVM and the Virtual Analysis Facility, capable of deploying on demand, and with a single command, a dedicated virtual HTCondor cluster with an automatically scalable number of virtual workers on any cloud supporting the standard EC2 interface. Input and output data are externally stored on EOS, and a dedicated CVMFS service is used to provide the software to be validated. We will show how the Release Validation Cluster deployment and disposal are completely transparent for the Release Manager, who simply triggers the validation from the ALICE build system's web interface. CernVM 3, based entirely on CVMFS, permits to boot any snapshot of the operating system in time: we will show how this allows us to certify each ALICE software release for an exact CernVM snapshot, addressing the problem of Long Term Data Preservation by ensuring a consistent environment for software execution and data reprocessing in the future.

  16. The Silicon Pixel Detector for ALICE Experiment

    SciTech Connect

    Fabris, D.; Bombonati, C.; Dima, R.; Lunardon, M.; Moretto, S.; Pepato, A.; Bohus, L. Sajo; Scarlassara, F.; Segato, G.; Shen, D.; Turrisi, R.; Viesti, G.; Anelli, G.; Boccardi, A.; Burns, M.; Campbell, M.; Ceresa, S.; Conrad, J.; Kluge, A.; Kral, M.

    2007-10-26

    The Inner Tracking System (ITS) of the ALICE experiment is made of position sensitive detectors which have to operate in a region where the track density may be as high as 50 tracks/cm{sup 2}. To handle such densities detectors with high precision and granularity are mandatory. The Silicon Pixel Detector (SPD), the innermost part of the ITS, has been designed to provide tracking information close to primary interaction point. The assembly of the entire SPD has been completed.

  17. Upgrade of the ALICE Inner Tracking System

    NASA Astrophysics Data System (ADS)

    Kushpil, Svetlana; ALICE Collaboration

    2016-02-01

    ALICE detector was constructed to study the properties of hot and dense hadronic matter formed in relativistic nuclear collisions. During the second long LHC shutdown in 2019-2020, the collaboration plans to upgrade the current vertex detector, the Inner Tracking System (ITS), in order to increase the reconstruction accuracy of secondary vertices and to lower the threshold of particle transverse momentum measurement. The upgrade strategy of ITS is based on the application of new Monolithic Active Pixel Sensors (MAPS) designed in 0.18 μm CMOS technology. The 50 μm thick chip consists of a single silicon die incorporating a 0.18 μm high-resistivity silicon epitaxial layer (sensor active volume) and matrix of charge collection diodes (pixels) with readout electronics. Radiation hardness of the upgraded ITS is one of the crucial moments in the overall performance of the system. A wide set of MAPS structures with different read-out circuits was produced and is being studied by the ALICE collaboration to optimize the pixel sensor functionality. An overview of the ALICE ITS upgrade and the expected performance improvement will be presented together with selected results from a campaign that includes several irradiation and beam tests.

  18. NASA's Plum Brook Station Water Systems

    NASA Technical Reports Server (NTRS)

    Puzak, Robert M.; Kimpton, Arthur

    2006-01-01

    Plum Brook Station's water systems were built in the 1940s to support a World War II ordnance production complex. Because the systems had not been analyzed for current NASA usage, it was unknown if they could meet current requirements and codes or if they were efficient for current use. NASA wanted to determine what improvements would be needed or advisable to support its research projects, so it contracted a hydraulic analysis of the raw and domestic water systems. Burgess and Niple determined current water demands and water flow, developed and calibrated models of the two water systems, and evaluated efficiency improvements and cost-cutting options. They recommended replacing some water mains, installing a new service connection, and removing some high-maintenance items (an underground reservoir, some booster pumps, and a tower).

  19. Just Add Water and Stir. Graduate Chemistry Laboratory, Stony Brook

    ERIC Educational Resources Information Center

    Yee, Roger

    1974-01-01

    Using traditional building materials and a fast-track recipe, the architects, acting as construction manager, completed the Graduate Chemistry Laboratory at Stony Brook, New York, two full years ahead of schedule. (Author/MF)

  20. 36 CFR 13.1226 - Brooks Falls area.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... Developed Area § 13.1226 Brooks Falls area. The area within 50 yards of the ordinary high water marks of the... entry from June 15 through August 15, unless authorized by the Superintendent. The Superintendent...

  1. 36 CFR 13.1226 - Brooks Falls area.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... Developed Area § 13.1226 Brooks Falls area. The area within 50 yards of the ordinary high water marks of the... entry from June 15 through August 15, unless authorized by the Superintendent. The Superintendent...

  2. 36 CFR 13.1226 - Brooks Falls area.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... Developed Area § 13.1226 Brooks Falls area. The area within 50 yards of the ordinary high water marks of the... entry from June 15 through August 15, unless authorized by the Superintendent. The Superintendent...

  3. 36 CFR 13.1226 - Brooks Falls area.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... Developed Area § 13.1226 Brooks Falls area. The area within 50 yards of the ordinary high water marks of the... entry from June 15 through August 15, unless authorized by the Superintendent. The Superintendent...

  4. 1. INTAKE CHANNEL LOOKING NORTHEAST; WATER FROM BEAVER BROOK ENTERS ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    1. INTAKE CHANNEL LOOKING NORTHEAST; WATER FROM BEAVER BROOK ENTERS THE INTAKE CHANNEL HERE. - Hondius Water Line, 1.6 miles Northwest of Park headquarters building & 1 mile Northwest of Beaver Meadows entrance station, Estes Park, Larimer County, CO

  5. Alice's Adventures in Wonderland: Nonsense Poetry and Whimsy. [Lesson Plan].

    ERIC Educational Resources Information Center

    2002

    This unit of study explores elements of wonder, distortion, fantasy, and whimsy in Lewis Carroll's beloved classic "Alice's Adventures in Wonderland." In the unit, students explore concepts about Wonderland and then listen to the opening chapters of "The Nursery Alice," Carroll's adaptation for younger readers and view Sir John Tenniel's…

  6. Using "Alice in Wonderland" to Teach Multiplication of Fractions

    ERIC Educational Resources Information Center

    Taber, Susan B.

    2007-01-01

    This article describes how the story of Alice in Wonderland helps students understand the operation of multiplying by a rational number less than 1 and related aspects of ratio and proportion. Included with this article is a "How Tall Is Alice?" Worksheet. (Contains 1 table and 6 figures.)

  7. A College for Appalachia: Alice Lloyd on Caney Creek.

    ERIC Educational Resources Information Center

    Searles, P. David

    This book documents the story of Alice Lloyd, a Massachusetts woman who founded Caney Creek Community Center and Caney Junior College (now Alice Lloyd College) in eastern Kentucky during the early 20th century. For the past 70 years, the college has enabled thousands of students from Appalachia to obtain a college education at little or no cost.…

  8. ALICE and The state of matter at LHC

    ScienceCinema

    None

    2016-07-12

    Assembly and installation of ALICE, the LHC heavy ion experiment dedicated to the study of matter at extreme temperature and pressure, is nearing completion and the commissioning of the detector is well under way. A good time to look back, to the making of ALICE, and to look forward, to the first physics with proton and heavy ion beams.

  9. Status of the ALICE experiment at the LHC

    SciTech Connect

    Herrera Corral, G.

    2008-11-13

    The Large Hadron Collider will provide soon, beams of protons and collisions at high energy to the experiments. ALICE stands for A Large Ion Collider Experiment. It is one of the experiments at the Large Hadron Collider. ALICE will be dedicated to the study of heavy ion collisions. The main goal of ALICE is the observation of the transition of ordinary matter into a plasma of quarks and gluons. ALICE consists of 16 systems of detection. Two of them were designed and constructed in Mexico: i) The V0A detector, located at 3.2 mts. from the interaction point and ii) The cosmic ray detector on the top of the magnet. After a quick review of the LHC and the ALICE experiment we will focus on the description of these systems.

  10. Particle identification in ALICE: a Bayesian approach

    NASA Astrophysics Data System (ADS)

    Adam, J.; Adamová, D.; Aggarwal, M. M.; Aglieri Rinella, G.; Agnello, M.; Agrawal, N.; Ahammed, Z.; Ahmad, S.; Ahn, S. U.; Aiola, S.; Akindinov, A.; Alam, S. N.; Albuquerque, D. S. D.; Aleksandrov, D.; Alessandro, B.; Alexandre, D.; Alfaro Molina, R.; Alici, A.; Alkin, A.; Almaraz, J. R. M.; Alme, J.; Alt, T.; Altinpinar, S.; Altsybeev, I.; Alves Garcia Prado, C.; Andrei, C.; Andronic, A.; Anguelov, V.; Antičić, T.; Antinori, F.; Antonioli, P.; Aphecetche, L.; Appelshäuser, H.; Arcelli, S.; Arnaldi, R.; Arnold, O. W.; Arsene, I. C.; Arslandok, M.; Audurier, B.; Augustinus, A.; Averbeck, R.; Azmi, M. D.; Badalà, A.; Baek, Y. W.; Bagnasco, S.; Bailhache, R.; Bala, R.; Balasubramanian, S.; Baldisseri, A.; Baral, R. C.; Barbano, A. M.; Barbera, R.; Barile, F.; Barnaföldi, G. G.; Barnby, L. S.; Barret, V.; Bartalini, P.; Barth, K.; Bartke, J.; Bartsch, E.; Basile, M.; Bastid, N.; Basu, S.; Bathen, B.; Batigne, G.; Batista Camejo, A.; Batyunya, B.; Batzing, P. C.; Bearden, I. G.; Beck, H.; Bedda, C.; Behera, N. K.; Belikov, I.; Bellini, F.; Bello Martinez, H.; Bellwied, R.; Belmont, R.; Belmont-Moreno, E.; Belyaev, V.; Benacek, P.; Bencedi, G.; Beole, S.; Berceanu, I.; Bercuci, A.; Berdnikov, Y.; Berenyi, D.; Bertens, R. A.; Berzano, D.; Betev, L.; Bhasin, A.; Bhat, I. R.; Bhati, A. K.; Bhattacharjee, B.; Bhom, J.; Bianchi, L.; Bianchi, N.; Bianchin, C.; Bielčík, J.; Bielčíková, J.; Bilandzic, A.; Biro, G.; Biswas, R.; Biswas, S.; Bjelogrlic, S.; Blair, J. T.; Blau, D.; Blume, C.; Bock, F.; Bogdanov, A.; Bøggild, H.; Boldizsár, L.; Bombara, M.; Book, J.; Borel, H.; Borissov, A.; Borri, M.; Bossú, F.; Botta, E.; Bourjau, C.; Braun-Munzinger, P.; Bregant, M.; Breitner, T.; Broker, T. A.; Browning, T. A.; Broz, M.; Brucken, E. J.; Bruna, E.; Bruno, G. E.; Budnikov, D.; Buesching, H.; Bufalino, S.; Buncic, P.; Busch, O.; Buthelezi, Z.; Butt, J. B.; Buxton, J. T.; Cabala, J.; Caffarri, D.; Cai, X.; Caines, H.; Calero Diaz, L.; Caliva, A.; Calvo Villar, E.; Camerini, P.; Carena, F.; Carena, W.; Carnesecchi, F.; Castillo Castellanos, J.; Castro, A. J.; Casula, E. A. R.; Ceballos Sanchez, C.; Cepila, J.; Cerello, P.; Cerkala, J.; Chang, B.; Chapeland, S.; Chartier, M.; Charvet, J. L.; Chattopadhyay, S.; Chattopadhyay, S.; Chauvin, A.; Chelnokov, V.; Cherney, M.; Cheshkov, C.; Cheynis, B.; Chibante Barroso, V.; Chinellato, D. D.; Cho, S.; Chochula, P.; Choi, K.; Chojnacki, M.; Choudhury, S.; Christakoglou, P.; Christensen, C. H.; Christiansen, P.; Chujo, T.; Chung, S. U.; Cicalo, C.; Cifarelli, L.; Cindolo, F.; Cleymans, J.; Colamaria, F.; Colella, D.; Collu, A.; Colocci, M.; Conesa Balbastre, G.; Conesa del Valle, Z.; Connors, M. E.; Contreras, J. G.; Cormier, T. M.; Corrales Morales, Y.; Cortés Maldonado, I.; Cortese, P.; Cosentino, M. R.; Costa, F.; Crochet, P.; Cruz Albino, R.; Cuautle, E.; Cunqueiro, L.; Dahms, T.; Dainese, A.; Danisch, M. C.; Danu, A.; Das, D.; Das, I.; Das, S.; Dash, A.; Dash, S.; De, S.; De Caro, A.; de Cataldo, G.; de Conti, C.; de Cuveland, J.; De Falco, A.; De Gruttola, D.; De Marco, N.; De Pasquale, S.; Deisting, A.; Deloff, A.; Dénes, E.; Deplano, C.; Dhankher, P.; Di Bari, D.; Di Mauro, A.; Di Nezza, P.; Diaz Corchero, M. A.; Dietel, T.; Dillenseger, P.; Divià, R.; Djuvsland, Ø.; Dobrin, A.; Domenicis Gimenez, D.; Dönigus, B.; Dordic, O.; Drozhzhova, T.; Dubey, A. K.; Dubla, A.; Ducroux, L.; Dupieux, P.; Ehlers, R. J.; Elia, D.; Endress, E.; Engel, H.; Epple, E.; Erazmus, B.; Erdemir, I.; Erhardt, F.; Espagnon, B.; Estienne, M.; Esumi, S.; Eum, J.; Evans, D.; Evdokimov, S.; Eyyubova, G.; Fabbietti, L.; Fabris, D.; Faivre, J.; Fantoni, A.; Fasel, M.; Feldkamp, L.; Feliciello, A.; Feofilov, G.; Ferencei, J.; Fernández Téllez, A.; Ferreiro, E. G.; Ferretti, A.; Festanti, A.; Feuillard, V. J. G.; Figiel, J.; Figueredo, M. A. S.; Filchagin, S.; Finogeev, D.; Fionda, F. M.; Fiore, E. M.; Fleck, M. G.; Floris, M.; Foertsch, S.; Foka, P.; Fokin, S.; Fragiacomo, E.; Francescon, A.; Frankenfeld, U.; Fronze, G. G.; Fuchs, U.; Furget, C.; Furs, A.; Fusco Girard, M.; Gaardhøje, J. J.; Gagliardi, M.; Gago, A. M.; Gallio, M.; Gangadharan, D. R.; Ganoti, P.; Gao, C.; Garabatos, C.; Garcia-Solis, E.; Gargiulo, C.; Gasik, P.; Gauger, E. F.; Germain, M.; Gheata, A.; Gheata, M.; Ghosh, P.; Ghosh, S. K.; Gianotti, P.; Giubellino, P.; Giubilato, P.; Gladysz-Dziadus, E.; Glässel, P.; Goméz Coral, D. M.; Gomez Ramirez, A.; Gonzalez, A. S.; Gonzalez, V.; González-Zamora, P.; Gorbunov, S.; Görlich, L.; Gotovac, S.; Grabski, V.; Grachov, O. A.; Graczykowski, L. K.; Graham, K. L.; Grelli, A.; Grigoras, A.; Grigoras, C.; Grigoriev, V.; Grigoryan, A.; Grigoryan, S.; Grinyov, B.; Grion, N.; Gronefeld, J. M.; Grosse-Oetringhaus, J. F.; Grosso, R.; Guber, F.; Guernane, R.; Guerzoni, B.; Gulbrandsen, K.; Gunji, T.; Gupta, A.; Gupta, R.; Haake, R.; Haaland, Ø.; Hadjidakis, C.; Haiduc, M.; Hamagaki, H.; Hamar, G.; Hamon, J. C.; Harris, J. W.; Harton, A.; Hatzifotiadou, D.; Hayashi, S.; Heckel, S. T.; Hellbär, E.; Helstrup, H.; Herghelegiu, A.; Herrera Corral, G.; Hess, B. A.; Hetland, K. F.; Hillemanns, H.; Hippolyte, B.; Horak, D.; Hosokawa, R.; Hristov, P.; Humanic, T. J.; Hussain, N.; Hussain, T.; Hutter, D.; Hwang, D. S.; Ilkaev, R.; Inaba, M.; Incani, E.; Ippolitov, M.; Irfan, M.; Ivanov, M.; Ivanov, V.; Izucheev, V.; Jacazio, N.; Jacobs, P. M.; Jadhav, M. B.; Jadlovska, S.; Jadlovsky, J.; Jahnke, C.; Jakubowska, M. J.; Jang, H. J.; Janik, M. A.; Jayarathna, P. H. S. Y.; Jena, C.; Jena, S.; Jimenez Bustamante, R. T.; Jones, P. G.; Jusko, A.; Kalinak, P.; Kalweit, A.; Kamin, J.; Kang, J. H.; Kaplin, V.; Kar, S.; Karasu Uysal, A.; Karavichev, O.; Karavicheva, T.; Karayan, L.; Karpechev, E.; Kebschull, U.; Keidel, R.; Keijdener, D. L. D.; Keil, M.; Mohisin Khan, M.; Khan, P.; Khan, S. A.; Khanzadeev, A.; Kharlov, Y.; Kileng, B.; Kim, D. W.; Kim, D. J.; Kim, D.; Kim, H.; Kim, J. S.; Kim, M.; Kim, S.; Kim, T.; Kirsch, S.; Kisel, I.; Kiselev, S.; Kisiel, A.; Kiss, G.; Klay, J. L.; Klein, C.; Klein, J.; Klein-Bösing, C.; Klewin, S.; Kluge, A.; Knichel, M. L.; Knospe, A. G.; Kobdaj, C.; Kofarago, M.; Kollegger, T.; Kolojvari, A.; Kondratiev, V.; Kondratyeva, N.; Kondratyuk, E.; Konevskikh, A.; Kopcik, M.; Kostarakis, P.; Kour, M.; Kouzinopoulos, C.; Kovalenko, O.; Kovalenko, V.; Kowalski, M.; Koyithatta Meethaleveedu, G.; Králik, I.; Kravčáková, A.; Krivda, M.; Krizek, F.; Kryshen, E.; Krzewicki, M.; Kubera, A. M.; Kučera, V.; Kuhn, C.; Kuijer, P. G.; Kumar, A.; Kumar, J.; Kumar, L.; Kumar, S.; Kurashvili, P.; Kurepin, A.; Kurepin, A. B.; Kuryakin, A.; Kweon, M. J.; Kwon, Y.; La Pointe, S. L.; La Rocca, P.; Ladron de Guevara, P.; Lagana Fernandes, C.; Lakomov, I.; Langoy, R.; Lara, C.; Lardeux, A.; Lattuca, A.; Laudi, E.; Lea, R.; Leardini, L.; Lee, G. R.; Lee, S.; Lehas, F.; Lemmon, R. C.; Lenti, V.; Leogrande, E.; León Monzón, I.; León Vargas, H.; Leoncino, M.; Lévai, P.; Li, S.; Li, X.; Lien, J.; Lietava, R.; Lindal, S.; Lindenstruth, V.; Lippmann, C.; Lisa, M. A.; Ljunggren, H. M.; Lodato, D. F.; Loenne, P. I.; Loginov, V.; Loizides, C.; Lopez, X.; López Torres, E.; Lowe, A.; Luettig, P.; Lunardon, M.; Luparello, G.; Lutz, T. H.; Maevskaya, A.; Mager, M.; Mahajan, S.; Mahmood, S. M.; Maire, A.; Majka, R. D.; Malaev, M.; Maldonado Cervantes, I.; Malinina, L.; Mal'Kevich, D.; Malzacher, P.; Mamonov, A.; Manko, V.; Manso, F.; Manzari, V.; Marchisone, M.; Mareš, J.; Margagliotti, G. V.; Margotti, A.; Margutti, J.; Marín, A.; Markert, C.; Marquard, M.; Martin, N. A.; Martin Blanco, J.; Martinengo, P.; Martínez, M. I.; Martínez García, G.; Martinez Pedreira, M.; Mas, A.; Masciocchi, S.; Masera, M.; Masoni, A.; Mastroserio, A.; Matyja, A.; Mayer, C.; Mazer, J.; Mazzoni, M. A.; Mcdonald, D.; Meddi, F.; Melikyan, Y.; Menchaca-Rocha, A.; Meninno, E.; Mercado Pérez, J.; Meres, M.; Miake, Y.; Mieskolainen, M. M.; Mikhaylov, K.; Milano, L.; Milosevic, J.; Mischke, A.; Mishra, A. N.; Miśkowiec, D.; Mitra, J.; Mitu, C. M.; Mohammadi, N.; Mohanty, B.; Molnar, L.; Montaño Zetina, L.; Montes, E.; Moreira De Godoy, D. A.; Moreno, L. A. P.; Moretto, S.; Morreale, A.; Morsch, A.; Muccifora, V.; Mudnic, E.; Mühlheim, D.; Muhuri, S.; Mukherjee, M.; Mulligan, J. D.; Munhoz, M. G.; Munzer, R. H.; Murakami, H.; Murray, S.; Musa, L.; Musinsky, J.; Naik, B.; Nair, R.; Nandi, B. K.; Nania, R.; Nappi, E.; Naru, M. U.; Natal da Luz, H.; Nattrass, C.; Navarro, S. R.; Nayak, K.; Nayak, R.; Nayak, T. K.; Nazarenko, S.; Nedosekin, A.; Nellen, L.; Ng, F.; Nicassio, M.; Niculescu, M.; Niedziela, J.; Nielsen, B. S.; Nikolaev, S.; Nikulin, S.; Nikulin, V.; Noferini, F.; Nomokonov, P.; Nooren, G.; Noris, J. C. C.; Norman, J.; Nyanin, A.; Nystrand, J.; Oeschler, H.; Oh, S.; Oh, S. K.; Ohlson, A.; Okatan, A.; Okubo, T.; Olah, L.; Oleniacz, J.; Oliveira Da Silva, A. C.; Oliver, M. H.; Onderwaater, J.; Oppedisano, C.; Orava, R.; Oravec, M.; Ortiz Velasquez, A.; Oskarsson, A.; Otwinowski, J.; Oyama, K.; Ozdemir, M.; Pachmayer, Y.; Pagano, D.; Pagano, P.; Paić, G.; Pal, S. K.; Pan, J.; Pandey, A. K.; Papikyan, V.; Pappalardo, G. S.; Pareek, P.; Park, W. J.; Parmar, S.; Passfeld, A.; Paticchio, V.; Patra, R. N.; Paul, B.; Pei, H.; Peitzmann, T.; Pereira Da Costa, H.; Peresunko, D.; Pérez Lara, C. E.; Perez Lezama, E.; Peskov, V.; Pestov, Y.; Petráček, V.; Petrov, V.; Petrovici, M.; Petta, C.; Piano, S.; Pikna, M.; Pillot, P.; Pimentel, L. O. D. L.; Pinazza, O.; Pinsky, L.; Piyarathna, D. B.; Płoskoń, M.; Planinic, M.; Pluta, J.; Pochybova, S.; Podesta-Lerma, P. L. M.; Poghosyan, M. G.; Polichtchouk, B.; Poljak, N.; Poonsawat, W.; Pop, A.; Porteboeuf-Houssais, S.; Porter, J.; Pospisil, J.; Prasad, S. K.; Preghenella, R.; Prino, F.; Pruneau, C. A.; Pshenichnov, I.; Puccio, M.; Puddu, G.; Pujahari, P.; Punin, V.; Putschke, J.; Qvigstad, H.; Rachevski, A.; Raha, S.; Rajput, S.; Rak, J.; Rakotozafindrabe, A.; Ramello, L.; Rami, F.; Raniwala, R.; Raniwala, S.; Räsänen, S. S.; Rascanu, B. T.; Rathee, D.; Read, K. F.; Redlich, K.; Reed, R. J.; Rehman, A.; Reichelt, P.; Reidt, F.; Ren, X.; Renfordt, R.; Reolon, A. R.; Reshetin, A.; Reygers, K.; Riabov, V.; Ricci, R. A.; Richert, T.; Richter, M.; Riedler, P.; Riegler, W.; Riggi, F.; Ristea, C.; Rocco, E.; Rodríguez Cahuantzi, M.; Rodriguez Manso, A.; Røed, K.; Rogochaya, E.; Rohr, D.; Röhrich, D.; Ronchetti, F.; Ronflette, L.; Rosnet, P.; Rossi, A.; Roukoutakis, F.; Roy, A.; Roy, C.; Roy, P.; Rubio Montero, A. J.; Rui, R.; Russo, R.; Ryabinkin, E.; Ryabov, Y.; Rybicki, A.; Saarinen, S.; Sadhu, S.; Sadovsky, S.; Šafařík, K.; Sahlmuller, B.; Sahoo, P.; Sahoo, R.; Sahoo, S.; Sahu, P. K.; Saini, J.; Sakai, S.; Saleh, M. A.; Salzwedel, J.; Sambyal, S.; Samsonov, V.; Šándor, L.; Sandoval, A.; Sano, M.; Sarkar, D.; Sarkar, N.; Sarma, P.; Scapparone, E.; Scarlassara, F.; Schiaua, C.; Schicker, R.; Schmidt, C.; Schmidt, H. R.; Schuchmann, S.; Schukraft, J.; Schulc, M.; Schutz, Y.; Schwarz, K.; Schweda, K.; Scioli, G.; Scomparin, E.; Scott, R.; Šefčík, M.; Seger, J. E.; Sekiguchi, Y.; Sekihata, D.; Selyuzhenkov, I.; Senosi, K.; Senyukov, S.; Serradilla, E.; Sevcenco, A.; Shabanov, A.; Shabetai, A.; Shadura, O.; Shahoyan, R.; Shahzad, M. I.; Shangaraev, A.; Sharma, A.; Sharma, M.; Sharma, M.; Sharma, N.; Sheikh, A. I.; Shigaki, K.; Shou, Q.; Shtejer, K.; Sibiriak, Y.; Siddhanta, S.; Sielewicz, K. M.; Siemiarczuk, T.; Silvermyr, D.; Silvestre, C.; Simatovic, G.; Simonetti, G.; Singaraju, R.; Singh, R.; Singha, S.; Singhal, V.; Sinha, B. C.; Sinha, T.; Sitar, B.; Sitta, M.; Skaali, T. B.; Slupecki, M.; Smirnov, N.; Snellings, R. J. M.; Snellman, T. W.; Song, J.; Song, M.; Song, Z.; Soramel, F.; Sorensen, S.; Souza, R. D. de; Sozzi, F.; Spacek, M.; Spiriti, E.; Sputowska, I.; Spyropoulou-Stassinaki, M.; Stachel, J.; Stan, I.; Stankus, P.; Stenlund, E.; Steyn, G.; Stiller, J. H.; Stocco, D.; Strmen, P.; Suaide, A. A. P.; Sugitate, T.; Suire, C.; Suleymanov, M.; Suljic, M.; Sultanov, R.; Šumbera, M.; Sumowidagdo, S.; Szabo, A.; Szanto de Toledo, A.; Szarka, I.; Szczepankiewicz, A.; Szymanski, M.; Tabassam, U.; Takahashi, J.; Tambave, G. J.; Tanaka, N.; Tarhini, M.; Tariq, M.; Tarzila, M. G.; Tauro, A.; Tejeda Muñoz, G.; Telesca, A.; Terasaki, K.; Terrevoli, C.; Teyssier, B.; Thäder, J.; Thakur, D.; Thomas, D.; Tieulent, R.; Timmins, A. R.; Toia, A.; Trogolo, S.; Trombetta, G.; Trubnikov, V.; Trzaska, W. H.; Tsuji, T.; Tumkin, A.; Turrisi, R.; Tveter, T. S.; Ullaland, K.; Uras, A.; Usai, G. L.; Utrobicic, A.; Vala, M.; Valencia Palomo, L.; Vallero, S.; Van Der Maarel, J.; Van Hoorne, J. W.; van Leeuwen, M.; Vanat, T.; Vande Vyvre, P.; Varga, D.; Vargas, A.; Vargyas, M.; Varma, R.; Vasileiou, M.; Vasiliev, A.; Vauthier, A.; Vechernin, V.; Veen, A. M.; Veldhoen, M.; Velure, A.; Vercellin, E.; Vergara Limón, S.; Vernet, R.; Verweij, M.; Vickovic, L.; Viesti, G.; Viinikainen, J.; Vilakazi, Z.; Villalobos Baillie, O.; Villatoro Tello, A.; Vinogradov, A.; Vinogradov, L.; Vinogradov, Y.; Virgili, T.; Vislavicius, V.; Viyogi, Y. P.; Vodopyanov, A.; Völkl, M. A.; Voloshin, K.; Voloshin, S. A.; Volpe, G.; von Haller, B.; Vorobyev, I.; Vranic, D.; Vrláková, J.; Vulpescu, B.; Wagner, B.; Wagner, J.; Wang, H.; Wang, M.; Watanabe, D.; Watanabe, Y.; Weber, M.; Weber, S. G.; Weiser, D. F.; Wessels, J. P.; Westerhoff, U.; Whitehead, A. M.; Wiechula, J.; Wikne, J.; Wilk, G.; Wilkinson, J.; Williams, M. C. S.; Windelband, B.; Winn, M.; Yang, H.; Yang, P.; Yano, S.; Yasin, Z.; Yin, Z.; Yokoyama, H.; Yoo, I.-K.; Yoon, J. H.; Yurchenko, V.; Yushmanov, I.; Zaborowska, A.; Zaccolo, V.; Zaman, A.; Zampolli, C.; Zanoli, H. J. C.; Zaporozhets, S.; Zardoshti, N.; Zarochentsev, A.; Závada, P.; Zaviyalov, N.; Zbroszczyk, H.; Zgura, I. S.; Zhalov, M.; Zhang, H.; Zhang, X.; Zhang, Y.; Zhang, C.; Zhang, Z.; Zhao, C.; Zhigareva, N.; Zhou, D.; Zhou, Y.; Zhou, Z.; Zhu, H.; Zhu, J.; Zichichi, A.; Zimmermann, A.; Zimmermann, M. B.; Zinovjev, G.; Zyzak, M.

    2016-05-01

    We present a Bayesian approach to particle identification (PID) within the ALICE experiment. The aim is to more effectively combine the particle identification capabilities of its various detectors. After a brief explanation of the adopted methodology and formalism, the performance of the Bayesian PID approach for charged pions, kaons and protons in the central barrel of ALICE is studied. PID is performed via measurements of specific energy loss ( d E/d x) and time of flight. PID efficiencies and misidentification probabilities are extracted and compared with Monte Carlo simulations using high-purity samples of identified particles in the decay channels K0S → π-π+, φ→ K-K+, and Λ→ p π- in p-Pb collisions at √{s_{NN}}=5.02 TeV. In order to thoroughly assess the validity of the Bayesian approach, this methodology was used to obtain corrected pT spectra of pions, kaons, protons, and D0 mesons in pp collisions at √{s}=7 TeV. In all cases, the results using Bayesian PID were found to be consistent with previous measurements performed by ALICE using a standard PID approach. For the measurement of D0 → K-π+, it was found that a Bayesian PID approach gave a higher signal-to-background ratio and a similar or larger statistical significance when compared with standard PID selections, despite a reduced identification efficiency. Finally, we present an exploratory study of the measurement of Λc+ → p K-π+ in pp collisions at √{s}=7 TeV, using the Bayesian approach for the identification of its decay products.

  11. The ALICE experiment at the CERN LHC

    NASA Astrophysics Data System (ADS)

    ALICE Collaboration; Aamodt, K.; Abrahantes Quintana, A.; Achenbach, R.; Acounis, S.; Adamová, D.; Adler, C.; Aggarwal, M.; Agnese, F.; Aglieri Rinella, G.; Ahammed, Z.; Ahmad, A.; Ahmad, N.; Ahmad, S.; Akindinov, A.; Akishin, P.; Aleksandrov, D.; Alessandro, B.; Alfaro, R.; Alfarone, G.; Alici, A.; Alme, J.; Alt, T.; Altinpinar, S.; Amend, W.; Andrei, C.; Andres, Y.; Andronic, A.; Anelli, G.; Anfreville, M.; Angelov, V.; Anzo, A.; Anson, C.; Anticić, T.; Antonenko, V.; Antonczyk, D.; Antinori, F.; Antinori, S.; Antonioli, P.; Aphecetche, L.; Appelshäuser, H.; Aprodu, V.; Arba, M.; Arcelli, S.; Argentieri, A.; Armesto, N.; Arnaldi, R.; Arefiev, A.; Arsene, I.; Asryan, A.; Augustinus, A.; Awes, T. C.; Äysto, J.; Danish Azmi, M.; Bablock, S.; Badalà, A.; Badyal, S. K.; Baechler, J.; Bagnasco, S.; Bailhache, R.; Bala, R.; Baldisseri, A.; Baldit, A.; Bán, J.; Barbera, R.; Barberis, P.-L.; Barbet, J. M.; Barnäfoldi, G.; Barret, V.; Bartke, J.; Bartos, D.; Basile, M.; Basmanov, V.; Bastid, N.; Batigne, G.; Batyunya, B.; Baudot, J.; Baumann, C.; Bearden, I.; Becker, B.; Belikov, J.; Bellwied, R.; Belmont-Moreno, E.; Belogianni, A.; Belyaev, S.; Benato, A.; Beney, J. L.; Benhabib, L.; Benotto, F.; Beolé, S.; Berceanu, I.; Bercuci, A.; Berdermann, E.; Berdnikov, Y.; Bernard, C.; Berny, R.; Berst, J. D.; Bertelsen, H.; Betev, L.; Bhasin, A.; Baskar, P.; Bhati, A.; Bianchi, N.; Bielčik, J.; Bielčiková, J.; Bimbot, L.; Blanchard, G.; Blanco, F.; Blanco, F.; Blau, D.; Blume, C.; Blyth, S.; Boccioli, M.; Bogdanov, A.; Bøggild, H.; Bogolyubsky, M.; Boldizsár, L.; Bombara, M.; Bombonati, C.; Bondila, M.; Bonnet, D.; Bonvicini, V.; Borel, H.; Borotto, F.; Borshchov, V.; Bortoli, Y.; Borysov, O.; Bose, S.; Bosisio, L.; Botje, M.; Böttger, S.; Bourdaud, G.; Bourrion, O.; Bouvier, S.; Braem, A.; Braun, M.; Braun-Munzinger, P.; Bravina, L.; Bregant, M.; Bruckner, G.; Brun, R.; Bruna, E.; Brunasso, O.; Bruno, G. E.; Bucher, D.; Budilov, V.; Budnikov, D.; Buesching, H.; Buncic, P.; Burns, M.; Burachas, S.; Busch, O.; Bushop, J.; Cai, X.; Caines, H.; Calaon, F.; Caldogno, M.; Cali, I.; Camerini, P.; Campagnolo, R.; Campbell, M.; Cao, X.; Capitani, G. P.; Romeo, G. Cara; Cardenas-Montes, M.; Carduner, H.; Carena, F.; Carena, W.; Cariola, P.; Carminati, F.; Casado, J.; Casanova Diaz, A.; Caselle, M.; Castillo Castellanos, J.; Castor, J.; Catanescu, V.; Cattaruzza, E.; Cavazza, D.; Cerello, P.; Ceresa, S.; Černý, V.; Chambert, V.; Chapeland, S.; Charpy, A.; Charrier, D.; Chartoire, M.; Charvet, J. L.; Chattopadhyay, S.; Chattopadhyay, S.; Chepurnov, V.; Chernenko, S.; Cherney, M.; Cheshkov, C.; Cheynis, B.; Chochula, P.; Chiavassa, E.; Chibante Barroso, V.; Choi, J.; Christakoglou, P.; Christiansen, P.; Christensen, C.; Chykalov, O. A.; Cicalo, C.; Cifarelli-Strolin, L.; Ciobanu, M.; Cindolo, F.; Cirstoiu, C.; Clausse, O.; Cleymans, J.; Cobanoglu, O.; Coffin, J.-P.; Coli, S.; Colla, A.; Colledani, C.; Combaret, C.; Combet, M.; Comets, M.; Conesa Balbastre, G.; Conesa del Valle, Z.; Contin, G.; Contreras, J.; Cormier, T.; Corsi, F.; Cortese, P.; Costa, F.; Crescio, E.; Crochet, P.; Cuautle, E.; Cussonneau, J.; Dahlinger, M.; Dainese, A.; Dalsgaard, H. H.; Daniel, L.; Das, I.; Das, T.; Dash, A.; Da Silva, R.; Davenport, M.; Daues, H.; DeCaro, A.; de Cataldo, G.; DeCuveland, J.; DeFalco, A.; de Gaspari, M.; de Girolamo, P.; de Groot, J.; DeGruttola, D.; DeHaas, A.; DeMarco, N.; DePasquale, S.; DeRemigis, P.; de Vaux, D.; Decock, G.; Delagrange, H.; DelFranco, M.; Dellacasa, G.; Dell'Olio, C.; Dell'Olio, D.; Deloff, A.; Demanov, V.; Dénes, E.; D'Erasmo, G.; Derkach, D.; Devaux, A.; Di Bari, D.; Di Bartelomen, A.; Di Giglio, C.; Di Liberto, S.; Di Mauro, A.; Di Nezza, P.; Dialinas, M.; Diaz, L.; Díaz Valdes, R.; Dietel, T.; Dima, R.; Ding, H.; Dinca, C.; Divià, R.; Dobretsov, V.; Dobrin, A.; Doenigus, B.; Dobrowolski, T.; Domínguez, I.; Dorn, M.; Drouet, S.; Dubey, A. E.; Ducroux, L.; Dumitrache, F.; Dumonteil, E.; Dupieux, P.; Duta, V.; Dutta Majumdar, A.; Dutta Majumdar, M.; Dyhre, Th; Efimov, L.; Efremov, A.; Elia, D.; Emschermann, D.; Engster, C.; Enokizono, A.; Espagnon, B.; Estienne, M.; Evangelista, A.; Evans, D.; Evrard, S.; Fabjan, C. W.; Fabris, D.; Faivre, J.; Falchieri, D.; Fantoni, A.; Farano, R.; Fearick, R.; Fedorov, O.; Fekete, V.; Felea, D.; Feofilov, G.; Férnandez Téllez, A.; Ferretti, A.; Fichera, F.; Filchagin, S.; Filoni, E.; Finck, C.; Fini, R.; Fiore, E. M.; Flierl, D.; Floris, M.; Fodor, Z.; Foka, Y.; Fokin, S.; Force, P.; Formenti, F.; Fragiacomo, E.; Fragkiadakis, M.; Fraissard, D.; Franco, A.; Franco, M.; Frankenfeld, U.; Fratino, U.; Fresneau, S.; Frolov, A.; Fuchs, U.; Fujita, J.; Furget, C.; Furini, M.; Fusco Girard, M.; Gaardhøje, J.-J.; Gabrielli, A.; Gadrat, S.; Gagliardi, M.; Gago, A.; Gaido, L.; Gallas Torreira, A.; Gallio, M.; Gandolfi, E.; Ganoti, P.; Ganti, M.; Garabatos, J.; Garcia Lopez, A.; Garizzo, L.; Gaudichet, L.; Gemme, R.; Germain, M.; Gheata, A.; Gheata, M.; Ghidini, B.; Ghosh, P.; Giolu, G.; Giraudo, G.; Giubellino, P.; Glasow, R.; Glässel, P.; Ferreiro, E. G.; Gonzalez Gutierrez, C.; Gonzales-Trueba, L. H.; Gorbunov, S.; Gorbunov, Y.; Gos, H.; Gosset, J.; Gotovac, S.; Gottschlag, H.; Gottschalk, D.; Grabski, V.; Grassi, T.; Gray, H.; Grebenyuk, O.; Grebieszkow, K.; Gregory, C.; Grigoras, C.; Grion, N.; Grigoriev, V.; Grigoryan, A.; Grigoryan, C.; Grigoryan, S.; Grishuk, Y.; Gros, P.; Grosse-Oetringhaus, J.; Grossiord, J.-Y.; Grosso, R.; Grynyov, B.; Guarnaccia, C.; Guber, F.; Guerin, F.; Guernane, R.; Guerzoni, M.; Guichard, A.; Guida, M.; Guilloux, G.; Gulkanyan, H.; Gulbrandsen, K.; Gunji, T.; Gupta, A.; Gupta, V.; Gustafsson, H.-A.; Gutbrod, H.; Hadjidakis, C.; Haiduc, M.; Hamar, G.; Hamagaki, H.; Hamblen, J.; Hansen, J. C.; Hardy, P.; Hatzifotiadou, D.; Harris, J. W.; Hartig, M.; Harutyunyan, A.; Hayrapetyan, A.; Hasch, D.; Hasegan, D.; Hehner, J.; Heine, N.; Heinz, M.; Helstrup, H.; Herghelegiu, A.; Herlant, S.; Herrera Corral, G.; Herrmann, N.; Hetland, K.; Hille, P.; Hinke, H.; Hippolyte, B.; Hoch, M.; Hoebbel, H.; Hoedlmoser, H.; Horaguchi, T.; Horner, M.; Hristov, P.; Hřivnáčová, I.; Hu, S.; Guo, C. Hu; Humanic, T.; Hurtado, A.; Hwang, D. S.; Ianigro, J. C.; Idzik, M.; Igolkin, S.; Ilkaev, R.; Ilkiv, I.; Imhoff, M.; Innocenti, P. G.; Ionescu, E.; Ippolitov, M.; Irfan, M.; Insa, C.; Inuzuka, M.; Ivan, C.; Ivanov, A.; Ivanov, M.; Ivanov, V.; Jacobs, P.; Jacholkowski, A.; Jančurová, L.; Janik, R.; Jasper, M.; Jena, C.; Jirden, L.; Johnson, D. P.; Jones, G. T.; Jorgensen, C.; Jouve, F.; Jovanović, P.; Junique, A.; Jusko, A.; Jung, H.; Jung, W.; Kadija, K.; Kamal, A.; Kamermans, R.; Kapusta, S.; Kaidalov, A.; Kakoyan, V.; Kalcher, S.; Kang, E.; Kapitan, J.; Kaplin, V.; Karadzhev, K.; Karavichev, O.; Karavicheva, T.; Karpechev, E.; Karpio, K.; Kazantsev, A.; Kebschull, U.; Keidel, R.; Mohsin Khan, M.; Khanzadeev, A.; Kharlov, Y.; Kikola, D.; Kileng, B.; Kim, D.; Kim, D. S.; Kim, D. W.; Kim, H. N.; Kim, J. S.; Kim, S.; Kinson, J. B.; Kiprich, S. K.; Kisel, I.; Kiselev, S.; Kisiel, A.; Kiss, T.; Kiworra, V.; Klay, J.; Klein Bösing, C.; Kliemant, M.; Klimov, A.; Klovning, A.; Kluge, A.; Kluit, R.; Kniege, S.; Kolevatov, R.; Kollegger, T.; Kolojvari, A.; Kondratiev, V.; Kornas, E.; Koshurnikov, E.; Kotov, I.; Kour, R.; Kowalski, M.; Kox, S.; Kozlov, K.; Králik, I.; Kramer, F.; Kraus, I.; Kravčáková, A.; Krawutschke, T.; Krivda, M.; Kryshen, E.; Kucheriaev, Y.; Kugler, A.; Kuhn, C.; Kuijer, P.; Kumar, L.; Kumar, N.; Kumpumaeki, P.; Kurepin, A.; Kurepin, A. N.; Kushpil, S.; Kushpil, V.; Kutovsky, M.; Kvaerno, H.; Kweon, M.; Labbé, J.-C.; Lackner, F.; Ladron de Guevara, P.; Lafage, V.; La Rocca, P.; Lamont, M.; Lara, C.; Larsen, D. T.; Laurenti, G.; Lazzeroni, C.; LeBornec, Y.; LeBris, N.; LeGailliard, C.; Lebedev, V.; Lecoq, J.; Lee, K. S.; Lee, S. C.; Lefévre, F.; Legrand, I.; Lehmann, T.; Leistam, L.; Lenoir, P.; Lenti, V.; Leon, H.; Monzon, I. Leon; Lévai, P.; Li, Q.; Li, X.; Librizzi, F.; Lietava, R.; Lindegaard, N.; Lindenstruth, V.; Lippmann, C.; Lisa, M.; Listratenko, O. M.; Littel, F.; Liu, Y.; Lo, J.; Lobanov, V.; Loginov, V.; López Noriega, M.; López-Ramírez, R.; López Torres, E.; Lorenzo, P. M.; Løvhøiden, G.; Lu, S.; Ludolphs, W.; Lunardon, M.; Luquin, L.; Lusso, S.; Lutz, J.-R.; Luvisetto, M.; Lyapin, V.; Maevskaya, A.; Magureanu, C.; Mahajan, A.; Majahan, S.; Mahmoud, T.; Mairani, A.; Mahapatra, D.; Makarov, A.; Makhlyueva, I.; Malek, M.; Malkiewicz, T.; Mal'Kevich, D.; Malzacher, P.; Mamonov, A.; Manea, C.; Mangotra, L. K.; Maniero, D.; Manko, V.; Manso, F.; Manzari, V.; Mao, Y.; Marcel, A.; Marchini, S.; Mareš, J.; Margagliotti, G. V.; Margotti, A.; Marin, A.; Marin, J.-C.; Marras, D.; Martinengo, P.; Martínez, M. I.; Martinez-Davalos, A.; Martínez Garcia, G.; Martini, S.; Marzari Chiesa, A.; Marzocca, C.; Masciocchi, S.; Masera, M.; Masetti, M.; Maslov, N. I.; Masoni, A.; Massera, F.; Mast, M.; Mastroserio, A.; Matthews, Z. L.; Mayer, B.; Mazza, G.; Mazzaro, M. D.; Mazzoni, A.; Meddi, F.; Meleshko, E.; Menchaca-Rocha, A.; Meneghini, S.; Meoni, M.; Mercado Perez, J.; Mereu, P.; Meunier, O.; Miake, Y.; Michalon, A.; Michinelli, R.; Miftakhov, N.; Mignone, M.; Mikhailov, K.; Milosevic, J.; Minaev, Y.; Minafra, F.; Mischke, A.; Miśkowiec, D.; Mitsyn, V.; Mitu, C.; Mohanty, B.; Moisa, D.; Molnar, L.; Mondal, M.; Mondal, N.; Montaño Zetina, L.; Monteno, M.; Morando, M.; Morel, M.; Moretto, S.; Morhardt, Th; Morsch, A.; Moukhanova, T.; Mucchi, M.; Muccifora, V.; Mudnic, E.; Müller, H.; Müller, W.; Munoz, J.; Mura, D.; Musa, L.; Muraz, J. F.; Musso, A.; Nania, R.; Nandi, B.; Nappi, E.; Navach, F.; Navin, S.; Nayak, T.; Nazarenko, S.; Nazarov, G.; Nellen, L.; Nendaz, F.; Nianine, A.; Nicassio, M.; Nielsen, B. S.; Nikolaev, S.; Nikolic, V.; Nikulin, S.; Nikulin, V.; Nilsen, B.; Nitti, M.; Noferini, F.; Nomokonov, P.; Nooren, G.; Noto, F.; Nouais, D.; Nyiri, A.; Nystrand, J.; Odyniec, G.; Oeschler, H.; Oinonen, M.; Oldenburg, M.; Oleks, I.; Olsen, E. K.; Onuchin, V.; Oppedisano, C.; Orsini, F.; Ortiz-Velázquez, A.; Oskamp, C.; Oskarsson, A.; Osmic, F.; Österman, L.; Otterlund, I.; Ovrebekk, G.; Oyama, K.; Pachr, M.; Pagano, P.; Paić, G.; Pajares, C.; Pal, S.; Pal, S.; Pálla, G.; Palmeri, A.; Pancaldi, G.; Panse, R.; Pantaleo, A.; Pappalardo, G. S.; Pastirčák, B.; Pastore, C.; Patarakin, O.; Paticchio, V.; Patimo, G.; Pavlinov, A.; Pawlak, T.; Peitzmann, T.; Pénichot, Y.; Pepato, A.; Pereira, H.; Peresunko, D.; Perez, C.; Perez Griffo, J.; Perini, D.; Perrino, D.; Peryt, W.; Pesci, A.; Peskov, V.; Pestov, Y.; Peters, A. J.; Petráček, V.; Petridis, A.; Petris, M.; Petrov, V.; Petrov, V.; Petrovici, M.; Peyré, J.; Piano, S.; Piccotti, A.; Pichot, P.; Piemonte, C.; Pikna, M.; Pilastrini, R.; Pillot, P.; Pinazza, O.; Pini, B.; Pinsky, L.; Pinto Morais, V.; Pismennaya, V.; Piuz, F.; Platt, R.; Ploskon, M.; Plumeri, S.; Pluta, J.; Pocheptsov, T.; Podesta, P.; Poggio, F.; Poghosyan, M.; Poghosyan, T.; Polák, K.; Polichtchouk, B.; Polozov, P.; Polyakov, V.; Pommeresch, B.; Pompei, F.; Pop, A.; Popescu, S.; Posa, F.; Pospíšil, V.; Potukuchi, B.; Pouthas, J.; Prasad, S.; Preghenella, R.; Prino, F.; Prodan, L.; Prono, G.; Protsenko, M. A.; Pruneau, C. A.; Przybyla, A.; Pshenichnov, I.; Puddu, G.; Pujahari, P.; Pulvirenti, A.; Punin, A.; Punin, V.; Putschke, J.; Quartieri, J.; Quercigh, E.; Rachevskaya, I.; Rachevski, A.; Rademakers, A.; Radomski, S.; Radu, A.; Rak, J.; Ramello, L.; Raniwala, R.; Raniwala, S.; Rasmussen, O. B.; Rasson, J.; Razin, V.; Read, K.; Real, J.; Redlich, K.; Reichling, C.; Renard, C.; Renault, G.; Renfordt, R.; Reolon, A. R.; Reshetin, A.; Revol, J.-P.; Reygers, K.; Ricaud, H.; Riccati, L.; Ricci, R. A.; Richter, M.; Riedler, P.; Rigalleau, L. M.; Riggi, F.; Riegler, W.; Rindel, E.; Riso, J.; Rivetti, A.; Rizzi, M.; Rizzi, V.; Rodriguez Cahuantzi, M.; Røed, K.; Röhrich, D.; Román-López, S.; Romanato, M.; Romita, R.; Ronchetti, F.; Rosinsky, P.; Rosnet, P.; Rossegger, S.; Rossi, A.; Rostchin, V.; Rotondo, F.; Roukoutakis, F.; Rousseau, S.; Roy, C.; Roy, D.; Roy, P.; Royer, L.; Rubin, G.; Rubio, A.; Rui, R.; Rusanov, I.; Russo, G.; Ruuskanen, V.; Ryabinkin, E.; Rybicki, A.; Sadovsky, S.; Šafařík, K.; Sahoo, R.; Saini, J.; Saiz, P.; Salur, S.; Sambyal, S.; Samsonov, V.; Šándor, L.; Sandoval, A.; Sann, H.; Santiard, J.-C.; Santo, R.; Santoro, R.; Sargsyan, G.; Saturnini, P.; Scapparone, E.; Scarlassara, F.; Schackert, B.; Schiaua, C.; Schicker, R.; Schioler, T.; Schippers, J. D.; Schmidt, C.; Schmidt, H.; Schneider, R.; Schossmaier, K.; Schukraft, J.; Schutz, Y.; Schwarz, K.; Schweda, K.; Schyns, E.; Scioli, G.; Scomparin, E.; Snow, H.; Sedykh, S.; Segato, G.; Sellitto, S.; Semeria, F.; Senyukov, S.; Seppänen, H.; Serci, S.; Serkin, L.; Serra, S.; Sesselmann, T.; Sevcenco, A.; Sgura, I.; Shabratova, G.; Shahoyan, R.; Sharkov, E.; Sharma, S.; Shigaki, K.; Shileev, K.; Shukla, P.; Shurygin, A.; Shurygina, M.; Sibiriak, Y.; Siddi, E.; Siemiarczuk, T.; Sigward, M. H.; Silenzi, A.; Silvermyr, D.; Silvestri, R.; Simili, E.; Simion, V.; Simon, R.; Simonetti, L.; Singaraju, R.; Singhal, V.; Sinha, B.; Sinha, T.; Siska, M.; Sitár, B.; Sitta, M.; Skaali, B.; Skowronski, P.; Slodkowski, M.; Smirnov, N.; Smykov, L.; Snellings, R.; Snoeys, W.; Soegaard, C.; Soerensen, J.; Sokolov, O.; Soldatov, A.; Soloviev, A.; Soltveit, H.; Soltz, R.; Sommer, W.; Soos, C.; Soramel, F.; Sorensen, S.; Soyk, D.; Spyropoulou-Stassinaki, M.; Stachel, J.; Staley, F.; Stan, I.; Stavinskiy, A.; Steckert, J.; Stefanini, G.; Stefanek, G.; Steinbeck, T.; Stelzer, H.; Stenlund, E.; Stocco, D.; Stockmeier, M.; Stoicea, G.; Stolpovsky, P.; Strmeň, P.; Stutzmann, J. S.; Su, G.; Sugitate, T.; Šumbera, M.; Suire, C.; Susa, T.; Sushil Kumar, K.; Swoboda, D.; Symons, J.; Szarka, I.; Szostak, A.; Szuba, M.; Szymanski, P.; Tadel, M.; Tagridis, C.; Tan, L.; Tapia Takaki, D.; Taureg, H.; Tauro, A.; Tavlet, M.; Tejeda Munoz, G.; Thäder, J.; Tieulent, R.; Timmer, P.; Tolyhy, T.; Topilskaya, N.; Torcato de Matos, C.; Torii, H.; Toscano, L.; Tosello, F.; Tournaire, A.; Traczyk, T.; Tröger, G.; Tromeur, W.; Truesdale, D.; Trzaska, W.; Tsiledakis, G.; Tsilis, E.; Tsvetkov, A.; Turcato, M.; Turrisi, R.; Tuveri, M.; Tveter, T.; Tydesjo, H.; Tykarski, L.; Tywoniuk, K.; Ugolini, E.; Ullaland, K.; Urbán, J.; Urciuoli, G. M.; Usai, G. L.; Usseglio, M.; Vacchi, A.; Vala, M.; Valiev, F.; Vande Vyvre, P.; Van Den Brink, A.; Van Eijndhoven, N.; Van Der Kolk, N.; van Leeuwen, M.; Vannucci, L.; Vanzetto, S.; Vanuxem, J.-P.; Vargas, M. A.; Varma, R.; Vascotto, A.; Vasiliev, A.; Vassiliou, M.; Vasta, P.; Vechernin, V.; Venaruzzo, M.; Vercellin, E.; Vergara, S.; Verhoeven, W.; Veronese, F.; Vetlitskiy, I.; Vernet, R.; Victorov, V.; Vidak, L.; Viesti, G.; Vikhlyantsev, O.; Vilakazi, Z.; Villalobos Baillie, O.; Vinogradov, A.; Vinogradov, L.; Vinogradov, Y.; Virgili, T.; Viyogi, Y.; Vodopianov, A.; Volpe, G.; Vranic, D.; Vrláková, J.; Vulpescu, B.; Wabnitz, C.; Wagner, V.; Wallet, L.; Wan, R.; Wang, Y.; Wang, Y.; Wheadon, R.; Weis, R.; Wen, Q.; Wessels, J.; Westergaard, J.; Wiechula, J.; Wiesenaecker, A.; Wikne, J.; Wilk, A.; Wilk, G.; Williams, C.; Willis, N.; Windelband, B.; Witt, R.; Woehri, H.; Wyllie, K.; Xu, C.; Yang, C.; Yang, H.; Yermia, F.; Yin, Z.; Yin, Z.; Ky, B. Yun; Yushmanov, I.; Yuting, B.; Zabrodin, E.; Zagato, S.; Zagreev, B.; Zaharia, P.; Zalite, A.; Zampa, G.; Zampolli, C.; Zanevskiy, Y.; Zarochentsev, A.; Zaudtke, O.; Závada, P.; Zbroszczyk, H.; Zepeda, A.; Zeter, V.; Zgura, I.; Zhalov, M.; Zhou, D.; Zhou, S.; Zhu, G.; Zichichi, A.; Zinchenko, A.; Zinovjev, G.; Zoccarato, Y.; Zubarev, A.; Zucchini, A.; Zuffa, M.

    2008-08-01

    ALICE (A Large Ion Collider Experiment) is a general-purpose, heavy-ion detector at the CERN LHC which focuses on QCD, the strong-interaction sector of the Standard Model. It is designed to address the physics of strongly interacting matter and the quark-gluon plasma at extreme values of energy density and temperature in nucleus-nucleus collisions. Besides running with Pb ions, the physics programme includes collisions with lighter ions, lower energy running and dedicated proton-nucleus runs. ALICE will also take data with proton beams at the top LHC energy to collect reference data for the heavy-ion programme and to address several QCD topics for which ALICE is complementary to the other LHC detectors. The ALICE detector has been built by a collaboration including currently over 1000 physicists and engineers from 105 Institutes in 30 countries. Its overall dimensions are 16 × 16 × 26 m3 with a total weight of approximately 10 000 t. The experiment consists of 18 different detector systems each with its own specific technology choice and design constraints, driven both by the physics requirements and the experimental conditions expected at LHC. The most stringent design constraint is to cope with the extreme particle multiplicity anticipated in central Pb-Pb collisions. The different subsystems were optimized to provide high-momentum resolution as well as excellent Particle Identification (PID) over a broad range in momentum, up to the highest multiplicities predicted for LHC. This will allow for comprehensive studies of hadrons, electrons, muons, and photons produced in the collision of heavy nuclei. Most detector systems are scheduled to be installed and ready for data taking by mid-2008 when the LHC is scheduled to start operation, with the exception of parts of the Photon Spectrometer (PHOS), Transition Radiation Detector (TRD) and Electro Magnetic Calorimeter (EMCal). These detectors will be completed for the high-luminosity ion run expected in 2010. This

  12. Hydraulic modeling of stream channels and structures in Harbor and Crow Hollow Brooks, Meriden, Connecticut

    USGS Publications Warehouse

    Weiss, Lawrence A.; Sears, Michael P.; Cervione, Michael A.

    1994-01-01

    Effects of urbanization have increased the frequency and size of floods along certain reaches of Harbor Brook and Crow Hollow Brook in Meriden, Conn. A floodprofile-modeling study was conducted to model the effects of selected channel and structural modifications on flood elevations and inundated areas. The study covered the reach of Harbor Brook downstream from Interstate 691 and the reach of Crow Hollow Brook downstream from Johnson Avenue. Proposed modifications, which include changes to bank heights, channel geometry, structural geometry, and streambed armoring on Harbor Brook and changes to bank heights on Crow Hollow Brook, significantly lower flood elevations. Results of the modeling indicate a significant reduction of flood elevations for the 10-year, 25-year, 35-year, 50-year, and 100-year flood frequencies using proposed modifications to (1 ) bank heights between Harbor Brook Towers and Interstate 691 on Harbor Brook, and between Centennial Avenue and Johnson Avenue on Crow Hollow Brook; (2) channel geometry between Coe Avenue and Interstate 69 1 on Harbor Brook; (3) bridge and culvert opening geometry between Harbor Brook Towers and Interstate 691 on Harbor Brook; and (4) channel streambed armoring between Harbor Brook Towers and Interstate 691 on Harbor Brook. The proposed modifications were developed without consideration of cost-benefit ratios.

  13. The Laser Teaching Center at Stony Brook

    NASA Astrophysics Data System (ADS)

    Metcalf, Harold

    2010-03-01

    Stony Brook's Laser Teaching Center was built more than ten years ago to serve a clientele ranging from high school (HS) students to graduate students. Its construction in a formerly open hallway area was financed by donations from private corporations and foundations, and it was equipped with similar contributions. It provides a working area for laser and optics-related projects, both individual and group. Its daily operations are overseen by a highly-dedicated Ph.D. who is a department employee. It is populated by HS students doing science fair related research, including the major national contests (in which we have many finalists and semifinalists), undergraduates doing extra-credit course projects and other kinds of research activities, graduate students in a special course called ``Optics Rotation,'' and many others who come to use its facilities. All of its denizens benefit enormously by occasional prestigious visitors. Students are drawn from among our undergraduates and graduate students, NSF's WISE program, special HS summer programs, and direct application from the outside. We have an excellent record of placing our HS students in the highest ranking colleges.

  14. Readout of the upgraded ALICE-ITS

    NASA Astrophysics Data System (ADS)

    Szczepankiewicz, A.

    2016-07-01

    The ALICE experiment will undergo a major upgrade during the second long shutdown of the CERN LHC. As part of this program, the present Inner Tracking System (ITS), which employs different layers of hybrid pixels, silicon drift and strip detectors, will be replaced by a completely new tracker composed of seven layers of monolithic active pixel sensors. The upgraded ITS will have more than twelve billion pixels in total, producing 300 Gbit/s of data when tracking 50 kHz Pb-Pb events. Two families of pixel chips realized with the TowerJazz CMOS imaging process have been developed as candidate sensors: the ALPIDE, which uses a proprietary readout and sparsification mechanism and the MISTRAL-O, based on a proven rolling shutter architecture. Both chips can operate in continuous mode, with the ALPIDE also supporting triggered operations. As the communication IP blocks are shared among the two chip families, it has been possible to develop a common Readout Electronics. All the sensor components (analog stages, state machines, buffers, FIFOs, etc.) have been modelled in a system level simulation, which has been extensively used to optimize both the sensor and the whole readout chain design in an iterative process. This contribution covers the progress of the R&D efforts and the overall expected performance of the ALICE-ITS readout system.

  15. The ALICE Glance Shift Accounting Management System (SAMS)

    NASA Astrophysics Data System (ADS)

    Martins Silva, H.; Abreu Da Silva, I.; Ronchetti, F.; Telesca, A.; Maidantchik, C.

    2015-12-01

    ALICE (A Large Ion Collider Experiment) is an experiment at the CERN LHC (Large Hadron Collider) studying the physics of strongly interacting matter and the quark-gluon plasma. The experiment operation requires a 24 hours a day and 7 days a week shift crew at the experimental site, composed by the ALICE collaboration members. Shift duties are calculated for each institute according to their correlated members. In order to ensure the full coverage of the experiment operation as well as its good quality, the ALICE Shift Accounting Management System (SAMS) is used to manage the shift bookings as well as the needed training. ALICE SAMS is the result of a joint effort between the Federal University of Rio de Janeiro (UFRJ) and the ALICE Collaboration. The Glance technology, developed by the UFRJ and the ATLAS experiment, sits at the basis of the system as an intermediate layer isolating the particularities of the databases. In this paper, we describe the ALICE SAMS development process and functionalities. The database has been modelled according to the collaboration needs and is fully integrated with the ALICE Collaboration repository to access members information and respectively roles and activities. Run, period and training coordinators can manage their subsystem operation and ensure an efficient personnel management. Members of the ALICE collaboration can book shifts and on-call according to pre-defined rights. ALICE SAMS features a user profile containing all the statistics and user contact information as well as the Institutes profile. Both the user and institute profiles are public (within the scope of the collaboration) and show the credit balance in real time. A shift calendar allows the Run Coordinator to plan data taking periods in terms of which subsystems shifts are enabled or disabled and on-call responsible people and slots. An overview display presents the shift crew present in the control room and allows the Run Coordination team to confirm the presence

  16. Aerospace medicine at Brooks AFB, TX: hail and farewell.

    PubMed

    Nunneley, Sarah A; Webb, James T

    2011-05-01

    With the impending termination of USAF operations at Brooks Air Force Base (AFB) in San Antonio, TX, it is time to consider its historic role in Aerospace Medicine. The base was established in 1917 as a flight training center for the U.S. Army Air Service and in 1926 became home to its School of Aviation Medicine. The school moved to San Antonio's Randolph Field in 1931, but in 1959 it returned to Brooks where it occupied new facilities to support its role as a national center for U.S. Air Force aerospace medicine, including teaching, clinical medicine, and research. The mission was then expanded to encompass support of U.S. military and civilian space programs. With the abrupt termination of the military space program in 1969, research at Brooks focused on clinical aviation medicine and support of advanced military aircraft while continuing close cooperation with NASA in support of orbital spaceflight and the journey to the Moon. Reorganization in the 1990s assigned all research functions at Brooks to the Human Systems Division and its successors, leaving to USAFSAM the missions related to clinical work and teaching. In 2002 the USAF and the city of San Antonio implemented shared operation of Brooks as a "City-Base" in the hope of deflecting threatened closure. Nevertheless, under continuing pressure to consolidate military facilities in the United States, the 2005 Base Closure and Realignment Commission ordered Brooks closed by 2011, with its aerospace medicine functions relocated to new facilities at Wright-Patterson AFB in Dayton, OH.

  17. Controls Interfaces for Two ALICE Subsystems

    NASA Astrophysics Data System (ADS)

    Thomen, Robert

    2007-10-01

    Software for the control of a laser alignment system for the Inner Tacking System (ITS) and for the Electromagnetic Calorimeter (EMC) was developed for the ALICE (A Large Ion Collider Experiment) at CERN. The interfaces for both subsystems use the CERN-standard hardware controls system PVSS (Prozessvisualisierungs- und Steuerungs-System). Software for the ITS has been created to measure the relative alignment of the ITS with the Time Projection Chamber (TPC) so to ensure accurate particle tracking. The ITS alignment system locates laser images in four cameras. The EMC requires several subsystems to be running in order to operate properly. Software has been created and tested for the detector's high and low voltage systems, and temperature monitoring hardware. The ITS and EMC software specifications and design requirements are presented and their performance is analyzed.

  18. Jet measurements by ALICE at LHC

    SciTech Connect

    Sultanov, Rishat; Collaboration: ALICE Collaboration

    2015-12-15

    Jets are collimated sprays of particles originating from fragmentation of high energy partons produced in a hard collision. They are an important diagnostic tool in studies of the Quark Gluon Plasma (QGP). The modification of the jet fragmentation pattern and its structure is a signature for the influence of hot and dense matter on the parton fragmentation process. Jet measurements in proton-proton collisions provide a baseline for similar measurements in heavy-ion collisions, while studies in proton-nucleus system allow to estimate cold nuclear matter effects. Here we present jet studies in different colliding systems (p–p, p–Pb, Pb–Pb) performed by the ALICE collaboration at LHC energies. Results on jet spectra, cross sections, nuclear modification factors, jet structure and other kinematic observables will be presented.

  19. Jet measurements by ALICE at LHC

    NASA Astrophysics Data System (ADS)

    Sultanov, Rishat

    2015-12-01

    Jets are collimated sprays of particles originating from fragmentation of high energy partons produced in a hard collision. They are an important diagnostic tool in studies of the Quark Gluon Plasma (QGP). The modification of the jet fragmentation pattern and its structure is a signature for the influence of hot and dense matter on the parton fragmentation process. Jet measurements in proton-proton collisions provide a baseline for similar measurements in heavy-ion collisions, while studies in proton-nucleus system allow to estimate cold nuclear matter effects. Here we present jet studies in different colliding systems (p-p, p-Pb, Pb-Pb) performed by the ALICE collaboration at LHC energies. Results on jet spectra, cross sections, nuclear modification factors, jet structure and other kinematic observables will be presented.

  20. Recent ALICE results on hadronic resonance production

    NASA Astrophysics Data System (ADS)

    Badalà, A.

    2015-06-01

    Hadronic resonances are a valuable tool to study the properties of the medium formed in heavy-ion collisions. In particular, they can provide information on particle-formation mechanisms and on the properties of the medium at chemical freeze-out. Furthermore they contribute to the systematic study of parton energy loss and quark recombination. Measurements of resonances in pp and in p-Pb collisions provide a necessary baseline for heavy-ion data and help to disentangle initial-state effects from medium-induced effects. In this paper the latest ALICE results on mid-rapidity K*(892)0 and ϕ(1020) production in pp, p-Pb and Pb-Pb collisions at LHC energies are presented.

  1. Thrust involvement of metamorphic rocks, southwestern Brooks Range, Alaska

    SciTech Connect

    Till, A.B.; Schmidt, J.M.; Nelson, S.W. )

    1988-10-01

    Most models for the tectonic history of the western Brooks Range treat Proterozoic and lower Paleozoic metamorphic rocks exposed in the southern part of the range as passive structural basement vertically uplifted late in the Mesozoic orogenic episode. Mapping in the metamorphic rocks shows that they can de divided into two structurally and metamorphically distinct belts, both of which were folded and thrust during the orogeny. Recognition of these belts and the nature of the contact separating them is critical to construction of accurate tectonic models of the Brooks Range fold and thrust belt.

  2. Endoparasites of plethodontid salamanders from Paradise Brook, New Hampshire.

    PubMed

    Muzzall, P M; Peebles, C R; Burton, T M

    1997-12-01

    Totals of 52 dusky salamanders Desmognathus fuscus, 51 two-lined salamanders Eurycea bislineata, 54 red-backed salamanders Plethodon cinereus, and 3 spring salamanders Gyrinophilus porphyriticus (Plethodontidae) collected in June and August 1995 from Paradise Brook, a tributary to Hubbard Brook, New Hampshire, were examined for parasites. Parasites found were Brachycoelium storeriae, Brachycoelium sp., Bothriocephalus rarus, Falcaustra sp., Omeia sp., Batracholandros magnavulvaris, and Cepedietta michiganensis. Eighty-six percent of the red-backed salamanders, a terrestrial species, harbored 1 or more parasites. Among the aquatic and semiaquatic species, 27% of the dusky and 45% of the two-lined salamanders were infected with 1 or more parasites.

  3. External access to ALICE controls conditions data

    NASA Astrophysics Data System (ADS)

    Jadlovský, J.; Jadlovská, A.; Sarnovský, J.; Jajčišin, Š.; Čopík, M.; Jadlovská, S.; Papcun, P.; Bielek, R.; Čerkala, J.; Kopčík, M.; Chochula, P.; Augustinus, A.

    2014-06-01

    ALICE Controls data produced by commercial SCADA system WINCCOA is stored in ORACLE database on the private experiment network. The SCADA system allows for basic access and processing of the historical data. More advanced analysis requires tools like ROOT and needs therefore a separate access method to the archives. The present scenario expects that detector experts create simple WINCCOA scripts, which retrieves and stores data in a form usable for further studies. This relatively simple procedure generates a lot of administrative overhead - users have to request the data, experts needed to run the script, the results have to be exported outside of the experiment network. The new mechanism profits from database replica, which is running on the CERN campus network. Access to this database is not restricted and there is no risk of generating a heavy load affecting the operation of the experiment. The developed tools presented in this paper allow for access to this data. The users can use web-based tools to generate the requests, consisting of the data identifiers and period of time of interest. The administrators maintain full control over the data - an authorization and authentication mechanism helps to assign privileges to selected users and restrict access to certain groups of data. Advanced caching mechanism allows the user to profit from the presence of already processed data sets. This feature significantly reduces the time required for debugging as the retrieval of raw data can last tens of minutes. A highly configurable client allows for information retrieval bypassing the interactive interface. This method is for example used by ALICE Offline to extract operational conditions after a run is completed. Last but not least, the software can be easily adopted to any underlying database structure and is therefore not limited to WINCCOA.

  4. The ALICE DAQ infoLogger

    NASA Astrophysics Data System (ADS)

    Chapeland, S.; Carena, F.; Carena, W.; Chibante Barroso, V.; Costa, F.; Dénes, E.; Divià, R.; Fuchs, U.; Grigore, A.; Ionita, C.; Delort, C.; Simonetti, G.; Soós, C.; Telesca, A.; Vande Vyvre, P.; Von Haller, B.; Alice Collaboration

    2014-04-01

    ALICE (A Large Ion Collider Experiment) is a heavy-ion experiment studying the physics of strongly interacting matter and the quark-gluon plasma at the CERN LHC (Large Hadron Collider). The ALICE DAQ (Data Acquisition System) is based on a large farm of commodity hardware consisting of more than 600 devices (Linux PCs, storage, network switches). The DAQ reads the data transferred from the detectors through 500 dedicated optical links at an aggregated and sustained rate of up to 10 Gigabytes per second and stores at up to 2.5 Gigabytes per second. The infoLogger is the log system which collects centrally the messages issued by the thousands of processes running on the DAQ machines. It allows to report errors on the fly, and to keep a trace of runtime execution for later investigation. More than 500000 messages are stored every day in a MySQL database, in a structured table keeping track for each message of 16 indexing fields (e.g. time, host, user, ...). The total amount of logs for 2012 exceeds 75GB of data and 150 million rows. We present in this paper the architecture and implementation of this distributed logging system, consisting of a client programming API, local data collector processes, a central server, and interactive human interfaces. We review the operational experience during the 2012 run, in particular the actions taken to ensure shifters receive manageable and relevant content from the main log stream. Finally, we present the performance of this log system, and future evolutions.

  5. The Bear Brook Watershed, Maine (BBWM), USA

    USGS Publications Warehouse

    Norton, S.; Kahl, J.; Fernandez, I.; Haines, T.; Rustad, L.; Nodvin, S.; Scofield, J.; Strickland, T.; Erickson, H.; Wigington, P.; Lee, J.

    1999-01-01

    The Bear Brook Watershed Manipulation project in Maine is a paired calibrated watershed study funded by the U.S. EPA. The research program is evaluating whole ecosystem response to elevated inputs of acidifying chemicals. The consists of a 2.5 year calibration period (1987-1989), nine years of chemical additions of (NH4)2SO4 (15N- and 34S-enriched for several years) to West Bear watershed (1989-1998), followed by a recovery period. The other watershed, East Bear, serves as a reference. Dosing is in six equal treatments/yr of 1800 eq SO4 and NH4/ha/yr, a 200% increase over 1988 loading (wet plus dry) for SO4 300% for N (wet NO3 + NH4). The experimental and reference watersheds are forested with mixed hard- and softwoods, and have thin acidic soils, areas of 10.2 and 10.7 ha and relief of 210 m. Thin till of variable composition is underlain by metasedimentary pelitic rocks and calc-silicate gneiss intruded by granite dikes and sills. For the period 1987-1995, precipitation averaged 1.4 m/yr, had a mean pH of 4.5, with SO4, NO3, and NH4 concentrations of 26, 14, and 7 ??eq/L, respectively. The nearly perrenial streams draining each watershed have discharges ranging from 0 (East Bear stops flowing for one to two months per year) to 150 L/sec. Prior to manipulation, East Bear and West Bear had a volume weighted annual mean pH of approximately 5.4, alkalinity = 0 to 4 ??eq/L, total base cations = 184 ??eq/L (sea-salt corrected = 118 ??eq/L), and SO4 = 100 to 111 ??eq/L. Nitrate ranged from 0 to 30 ??eq/L with an annual mean of 6 to 25 ??eq/L; dissolved organic carbon (DOC) ranged from 1 to 7 mg/L but was typically less than 3. Episodic acidification occurred at high discharge and was caused by dilution of cations, slightly increased DOC, significantly higher NO3, and the sea-salt effect. Depressions in pH were accompanied by increases in inorganic Al. The West Bear catchment responded to the chemical additions with increased export of base cations, Al, SO4, NO3, and

  6. Clarification to Brook and Willoughby (2016).

    PubMed

    2016-07-01

    Reports an error in "Social anxiety and alcohol use across the university years: Adaptive and maladaptive groups" by Christina A. Brook and Teena Willoughby (Developmental Psychology, 2016[May], Vol 52[5], 835-845). In the article, Figures 1 and 2 and Tables 1, 2, 3, and 4 were inadvertently designated as supplemental material. The figures and tables are present in the erratum. (The following abstract of the original article appeared in record 2016-13161-001.) University/college can be a challenging time as students face developmental tasks such as building new social networks and achieving academically. Social anxiety may be disadvantageous in this setting given that social situations often include drinking and individuals with social anxiety tend to self-medicate through alcohol use. However, findings are mixed as to whether the association between social anxiety and alcohol use is positive or negative. To clarify the nature of this association, we used a person-centered longitudinal analysis to identify student groups based on levels of social anxiety symptoms and alcohol consumption. Undergraduates (N = 1132, 70.5% female, Mage = 19.06 at Time 1) enrolled in university completed a survey assessing social anxiety and alcohol use over 3 years, and psychosocial functioning and emotion coping behaviors at Time 1. Two out of 5 groups were identified with higher levels of social anxiety, 1 with moderately low alcohol use, and the other with moderately high alcohol use. Both groups reported higher levels of general anxiety, depressive symptoms, behavioral inhibition, emotional reactivity, daily hassles, and lower levels of social ties at Time 1 than the 3 groups with lower levels of social anxiety. Furthermore, the social anxiety-alcohol use group reported significantly lower academic grades and was more likely to endorse problematic emotion coping behaviors (e.g., self-injury) than the social anxiety-low alcohol use group. These results not only help explain the

  7. Through the Looking Glass and What Alice Ate There

    NASA Astrophysics Data System (ADS)

    Yee, Gordon T.

    2002-05-01

    In the book Through the Looking Glass and What Alice Found There by Lewis Carroll, Alice (of Alice-in-Wonderland fame) walks through a mirror into a mirror-image world. Assuming that she is not changed by this transition, her enzymes are still only capable of processing molecules of the handedness of her native world. In short, she has a problem that will severely curtail the duration of her stay because her body cannot make use of most of the calorie-containing molecules that would exist naturally in the mirror-image world. So the question is, what can Alice eat in the mirror-image world that provides nutritional value to her?

    Featured on the Cover

  8. Overview of jet physics with ALICE at the LHC

    NASA Astrophysics Data System (ADS)

    Wang, Mengliang

    2016-05-01

    In these proceedings, a selection of recent results on jet physics from ALICE experiment is presented, including jet spectra, nuclear modification factors, jet structure and fragmentation observables, obtained in different collision systems (pp, p-Pb and Pb-Pb).

  9. Seasonal temperature and precipitation regulate brook trout young-of-the-year abundance and population dynamics

    USGS Publications Warehouse

    Kanno, Yoichiro; Pregler, Kasey C.; Hitt, Nathaniel P.; Letcher, Benjamin H.; Hocking, Daniel; Wofford, John E.B.

    2015-01-01

    Our results indicate that YOY abundance is a key driver of brook trout population dynamics that is mediated by seasonal weather patterns. A reliable assessment of climate change impacts on brook trout needs to account for how alternations in seasonal weather patterns impact YOY abundance and how such relationships may differ across the range of brook trout distribution.

  10. "Alice in Wonderland syndrome" associated with topiramate for migraine prevention.

    PubMed

    Jürgens, T P; Ihle, K; Stork, J-H; May, A

    2011-02-01

    Various visual and sensory phenomena have been described in migraine with aura. Among those, the 'Alice in Wonderland' syndrome is defined as a distortion of the body image with the patient being aware of its unreal nature. Here, the case of a 17-year-old girl with migraine without aura who developed an 'Alice in Wonderland' syndrome repeatedly on topiramate treatment was presented and potential pathophysiological concepts were discussed. PMID:20571045

  11. Alice, Benzene, and Coffee: The ABCs of Ecopharmacognosy.

    PubMed

    Cordell, Geoffrey A

    2015-12-01

    The sesquicentennial celebrations of the publication of "Alice's Adventures in Wonderland" and the structure of benzene offer a unique opportunity to develop a contemporary interpretation of aspects of Alice's adventures, illuminate the symbolism of benzene, and contextualize both with the globalization of coffee, transitioning to how the philosophy and sustainable practices of ecopharmacognosy may be applied to modulating approaches to the quality, safety, efficacy, and consistency (QSEC) of traditional medicines and dietary supplements through technology integration, thereby improving patient-centered health care.

  12. Open access for ALICE analysis based on virtualization technology

    NASA Astrophysics Data System (ADS)

    Buncic, P.; Gheata, M.; Schutz, Y.

    2015-12-01

    Open access is one of the important leverages for long-term data preservation for a HEP experiment. To guarantee the usability of data analysis tools beyond the experiment lifetime it is crucial that third party users from the scientific community have access to the data and associated software. The ALICE Collaboration has developed a layer of lightweight components built on top of virtualization technology to hide the complexity and details of the experiment-specific software. Users can perform basic analysis tasks within CernVM, a lightweight generic virtual machine, paired with an ALICE specific contextualization. Once the virtual machine is launched, a graphical user interface is automatically started without any additional configuration. This interface allows downloading the base ALICE analysis software and running a set of ALICE analysis modules. Currently the available tools include fully documented tutorials for ALICE analysis, such as the measurement of strange particle production or the nuclear modification factor in Pb-Pb collisions. The interface can be easily extended to include an arbitrary number of additional analysis modules. We present the current status of the tools used by ALICE through the CERN open access portal, and the plans for future extensions of this system.

  13. Brookings-Wharton Papers on Urban Affairs: 2006

    ERIC Educational Resources Information Center

    Burtless, Gary, Ed.; Pack, Janet Rothenberg, Ed.

    2006-01-01

    Designed to reach a wide audience of scholars and policymakers, the "Brookings-Wharton Papers on Urban Affairs" is an annual series that serves as a forum for cutting-edge, accessible research on urban policy. The editors seek to integrate broader research into the policy discussion by bringing urban studies scholars together with economists and…

  14. Induction and viability of tetraploids in brook trout (Salvelinus fontinalis)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Brook trout (Salvelinus fontinalis) populations are threatened by introduction of invasive species, habitat loss, and habitat degradation in their native range; and are a problem invasive species in western Unites States and Canada, and in Europe. Stocking sterile triploids has been promoted as an ...

  15. Preservation at Stony Brook. Preservation Planning Program. Study Report.

    ERIC Educational Resources Information Center

    Cook, Donald C.; And Others

    This final report is a product of a Preservation Planning Program (PPP) self-study conducted by the State University of New York (SUNY), Stony Brook, working with the Association of Research Libraries' (ARL) Office of Management Studies (OMS). The PPP is designed to put self-help tools into the hands of library staff responsible for developing…

  16. Documentary Linguistics and Computational Linguistics: A Response to Brooks

    ERIC Educational Resources Information Center

    Bird, Steven; Chiang, David; Frowein, Friedel; Hanke, Florian; Vaswani, Ashish

    2015-01-01

    In mid-2012, the authors organized a two-week workshop in Papua New Guinea to provide training in basic techniques and technologies for language documentation, and to gain understanding of how these technologies might be improved in the future. An assessment of the workshop was conducted by Brooks with the central idea that the workshop's…

  17. Upgrade of the ALICE muon trigger electronics

    NASA Astrophysics Data System (ADS)

    Dupieux, P.; Joly, B.; Jouve, F.; Manen, S.; Vandaële, R.

    2014-09-01

    The ALICE muon trigger is a large scale detector based on single gap bakelite RPCs. An upgrade of the electronics is needed in order to withstand the increase of luminosity after the LHC Long Shutdown-2 in 2018-2019. The detector will be read out at the minimum bias rate of 100 kHz in Pb-Pb collisions (including a safety factor of 2), two orders of magnitude above the present design. For the most exposed RPCs and in the present conditions of operation, the total integrated charge could be as high as 100 mC/cm2 with rates up to 100 Hz/cm2, which is above the present limit for safe operation. In order to overcome these limitations, upgrade projects of the Front-End (FE) and Readout Electronics are scheduled. The readout upgrade at high rate with low dead time requires changing most of the present electronics. It involves a new design for the 234 Local cards receiving the LVDS signals from the FE electronics and the 16 Regional concentrator cards. The readout chain is completed by a single Common Readout Unit developed for most ALICE sub-detectors. The new architecture of the muon trigger readout will be briefly presented. The present FE electronics, designed for the streamer mode, must be replaced to prevent ageing of the RPCs in the future operating conditions. The new FE called FEERIC (for Front-End Electronics Rapid Integrated Circuit) will have to perform amplification of the analog input signals. This will allow for RPC operation in a low-gain avalanche mode, with a much smaller charge deposit (factor 3-5) in the detector as compared to the present conditions. The purpose is to discriminate RPC signals with a charge threshold around 100 fC, in both polarities, and with a time jitter below 1 ns. We will describe the FE card and FEERIC ASIC features and first prototype performance, report on test results obtained on a cosmic test bench and discuss ongoing developments.

  18. Evaluation of an Unsuccessful Brook Trout Electrofishing Removal Project in a Small Rocky Mountain Stream.

    SciTech Connect

    Meyer, Kevin A.; Lamansky, Jr., James A.; Schill, Daniel J.

    2006-01-26

    In the western United States, exotic brook trout Salvelinus fontinalis frequently have a deleterious effect on native salmonids, and biologists often attempt to remove brook trout from streams by means of electrofishing. Although the success of such projects typically is low, few studies have assessed the underlying mechanisms of failure, especially in terms of compensatory responses. A multiagency watershed advisory group (WAG) conducted a 3-year removal project to reduce brook trout and enhance native salmonids in 7.8 km of a southwestern Idaho stream. We evaluated the costs and success of their project in suppressing brook trout and looked for brook trout compensatory responses, such as decreased natural mortality, increased growth, increased fecundity at length, and earlier maturation. The total number of brook trout removed was 1,401 in 1998, 1,241 in 1999, and 890 in 2000; removal constituted an estimated 88% of the total number of brook trout in the stream in 1999 and 79% in 2000. Although abundance of age-1 and older brook trout declined slightly during and after the removals, abundance of age-0 brook trout increased 789% in the entire stream 2 years after the removals ceased. Total annual survival rate for age-2 and older brook trout did not decrease during the removals, and the removals failed to produce an increase in the abundance of native redband trout Oncorhynchus mykiss gairdneri. Lack of a meaningful decline and unchanged total mortality for older brook trout during the removals suggest that a compensatory response occurred in the brook trout population via reduced natural mortality, which offset the removal of large numbers of brook trout. Although we applaud WAG personnel for their goal of enhancing native salmonids by suppressing brook trout via electrofishing removal, we conclude that their efforts were unsuccessful and suggest that similar future projects elsewhere over such large stream lengths would be costly, quixotic enterprises.

  19. Hierarchical Trigger of the ALICE Calorimeters

    SciTech Connect

    Muller, Hans; Awes, Terry C

    2010-05-01

    The trigger of the ALICE electromagnetic calorimeters is implemented in 2 hierarchically connected layers of electronics. In the lower layer, level-0 algorithms search shower energy above threshold in locally confined Trigger Region Units (TRU). The top layer is implemented as a single, global trigger unit that receives the trigger data from all TRUs as input to the level-1 algorithm. This architecture was first developed for the PHOS high p{sub T} photon trigger before it was adopted by EMCal also for the jet trigger. TRU units digitize up to 112 analogue input signals from the Front End Electronics (FEE) and concentrate their digital stream in a single FPGA. A charge and time summing algorithm is combined with a peakfinder that suppresses spurious noise and is precise to single LHC bunches. With a peak-to-peak noise level of 150 MeV the linear dynamic range above threshold spans from MIP energies at 215 up to 50 GeV. Local level-0 decisions take less than 600 ns after LHC collisions, upon which all TRUs transfer their level-0 trigger data to the upstream global trigger module which searches within the remaining level-1 latency for high p{sub T} gamma showers (PHOS) and/or for Jet cone areas (EMCaL).

  20. Commissioning of the ALICE data acquisition system

    NASA Astrophysics Data System (ADS)

    Anticic, T.; Barroso, V.; Carena, F.; Carena, W.; Chapeland, S.; Cobanoglu, O.; Dénes, E.; Divià, R.; Fuchs, U.; Kiss, T.; Makhlyueva, I.; Ozok, F.; Roukoutakis, F.; Schossmaier, K.; Soós, C.; Vyvre, P. V.; Vergara, S.

    2008-07-01

    ALICE (A Large Ion Collider Experiment) is the heavy-ion detector designed to study the physics of strongly interacting matter and the quark-gluon plasma at the CERN Large Hadron Collider (LHC). A flexible, large bandwidth Data Acquisition System (DAQ) has been designed and deployed to collect sufficient statistics in the short running time foreseen per year for heavy ions and to accommodate very different requirements originated from the 18 sub-detectors. The Data Acquisition and Test Environment (DATE) is the software framework handling the data from the detector electronics up to the mass storage. This paper reviews the DAQ software and hardware architecture, including the latest features of the final design, such as the handling of the numerous calibration procedures in a common framework. We also discuss the large scale tests conducted on the real hardware to assess the standalone DAQ performances, its interfaces with the other online systems and the extensive commissioning performed in order to be ready for cosmics data taking scheduled to start in November 2007. The test protocols followed to integrate and validate each sub-detector with DAQ and Trigger hardware synchronized by the Experiment Control System are described. Finally, we give an overview of the experiment logbook, and some operational aspects of the deployment of our computing facilities. The implementation of a Transient Data Storage able to cope with the 1.25 GB/s recorded by the event-building machines and the data quality monitoring framework are covered in separate papers.

  1. Hierarchical trigger of the ALICE calorimeters

    NASA Astrophysics Data System (ADS)

    Muller, Hans; Awes, Terry C.; Novitzky, Norbert; Kral, Jiri; Rak, Jan; Schambach, Jo; Wang, Yaping; Wang, Dong; Zhou, Daicui

    2010-05-01

    The trigger of the ALICE electromagnetic calorimeters is implemented in 2 hierarchically connected layers of electronics. In the lower layer, level-0 algorithms search shower energy above threshold in locally confined Trigger Region Units (TRU). The top layer is implemented as a single, global trigger unit that receives the trigger data from all TRUs as input to the level-1 algorithm. This architecture was first developed for the PHOS high pT photon trigger before it was adopted by EMCal also for the jet trigger. TRU units digitize up to 112 analogue input signals from the Front End Electronics (FEE) and concentrate their digital stream in a single FPGA. A charge and time summing algorithm is combined with a peakfinder that suppresses spurious noise and is precise to single LHC bunches. With a peak-to-peak noise level of 150 MeV the linear dynamic range above threshold spans from MIP energies at 215 up to 50 GeV. Local level-0 decisions take less than 600 ns after LHC collisions, upon which all TRUs transfer their level-0 trigger data to the upstream global trigger module which searches within the remaining level-1 latency for high pT gamma showers (PHOS) and/or for Jet cone areas (EMCaL).

  2. Status of the ALICE CERN Analysis Facility

    NASA Astrophysics Data System (ADS)

    Meoni, Marco; Fiete Grosse-Oetringhaus, Jan; Carminati, Federico; ALICE Collaboration

    2010-04-01

    The ALICE experiment at CERN LHC is using a PROOF-enabled cluster for fast physics analysis, detector calibration and reconstruction of small data samples. The current system (CAF - CERN Analysis Facility) consists of some 120 CPU cores and about 45 TB of disk space distributed across the CAF hosts. One of the most important aspects of the data analysis on the CAF is the speed with which it can be carried out. The system is particularly aimed at the prototyping phase of analyses that need a high number of iterations and thus require a short response time. Quasi-online quality assurance of data can be obtained. The paper describes the design principles of the PROOF framework and presents the current setup, performance tests and usage statistics. Subsets of selected data can be automatically staged in CAF from the Grid storage systems, therefore data distribution and staging techniques are described in depth. A fairshare algorithm to adjust the priorities of concurrently running sessions is also examined. Furthermore, the adaptation of PROOF to the AliEn/gLite Grid middleware is described. This approach enables a dynamic startup of PROOF nodes worldwide with the purpose to process much larger physics datasets.

  3. The Anatomy of A.L.I.C.E.

    NASA Astrophysics Data System (ADS)

    Wallace, Richard S.

    This paper is a technical presentation of Artificial Linguistic Internet Computer Entity (A.L.I.C.E.) and Artificial Intelligence Markup Language (AIML), set in context by historical and philosophical ruminations on human consciousness. A.L.I.C.E., the first AIML-based personality program, won the Loebner Prize as "the most human computer" at the annual Turing Test contests in 2000, 2001, and 2004. The program, and the organization that develops it, is a product of the world of free software. More than 500 volunteers from around the world have contributed to her development. This paper describes the history of A.L.I.C.E. and AIML-free software since 1995, noting that the theme and strategy of deception and pretense upon which AIML is based can be traced through the history of Artificial Intelligence research. This paper goes on to show how to use AIML to create robot personalities like A.L.I.C.E. that pretend to be intelligent and selfaware. The paper winds up with a survey of some of the philosophical literature on the question of consciousness. We consider Searle's Chinese Room, and the view that natural language understanding by a computer is impossible. We note that the proposition "consciousness is an illusion" may be undermined by the paradoxes it apparently implies. We conclude that A.L.I.C.E. does pass the Turing Test, at least, to paraphrase Abraham Lincoln, for some of the people some of the time.

  4. Alice in Wonderland syndrome as aura of migraine.

    PubMed

    Ilik, Faik; Ilik, Kemal

    2014-08-01

    Alice in Wonderland syndrome (AIWS), named for Lewis Carroll's titular character, is a disorder characterized by transient episodes of visual hallucinations and perceptual distortions, during which objects or body parts are perceived as altered in various ways (metamorphopsia), including enlargement (macropsia) or reduction (micropsia) in the perceived size of a form. Migraine aura is a transient neurological symptom that most commonly involves the visual fields and occurs before the headache phase. Aura symptoms include the perception of flashing lights that begin in the center of vision and expand in jagged patterns out into the periphery. Symptoms may be somatosensory, such as numbness and tingling in the lips or fingers. They may also involve a profound alteration of the perception of space and time (the "Alice in Wonderland" syndrome). In this article, we present a child had Alice in Wonderland syndrome as aura of migraine. PMID:23957288

  5. Survival of brook trout embryos in three episodically acidified streams

    SciTech Connect

    Fiss, F.C. ); Carline, R.F. )

    1993-03-01

    We evaluated, for brook trout Salvelinus fontinalis in three streams that undergo episodic acidification during critical periods of embryo development, survival of embryos from egg disposition to preemergence in natural redds and survival of sac fry in toxicity tests done in situ. Twenty-five natural redds were used for comparisons among streams. Median survival to preemergence (range, 16-68%) was different (P [le] 0.05) among streams and was inversely related to stream concentration of inorganic monomeric Al. Survival to preemergence was not related to intragravel dissolved oxygen concentration, gravel quality, or depth or velocity of stream water at redd sites. Median survival of sac fry exposed to stream water for 39 d was different among streams (range, 51-95%) and was inversely related to stream concentration of inorganic monomeric Al. Episodic acidification could lead to declines in populations of brook trout by causing decreased survival of early life stages. 37 refs., 2 figs., 7 tabs.

  6. A geologic framework for mineralization in the western Brooks Range

    USGS Publications Warehouse

    Young, Lorne E.

    2004-01-01

    The Brooks Range is a 950-km-long north-vergent fold and thrust belt, which was formed during Mesozoic convergence of the continental Arctic Alaska terrane and the oceanic Angayucham terrane and was further shortened and uplifted in Tertiary time. The Arctic Alaska terrane consists of parautochthonous rocks and the Endicott Mountains and De Long Mountains subterranes. The Endicott Mountains allochthon of the western Brooks Range is the setting for many sulfide and barite occurrences, such as the supergiant Red Dog zinc-lead mine. Mineralization is sediment hosted and most commonly is present in black shale and carbonate turbidites of the Mississippian Kuna Formation. The reconstructed Kuna basin is a 200 by +600 km feature that represents the culmination of a remarkable chain of events that includes three fluvial-deltaic and two or more orogenic cycles, Middle Devonian to Mississippian episodes of extension and igneous activity, and the emergence of a seaward Lower Proterozoic landmass that may have constituted a barrier to marine circulation. Mississippian extension and related horst-and-graben architecture in the western Brooks Range is manifested in part by strong facies variability between coeval units of allochthons and structural plates. Shallow marine to possibly nonmarine arkose, platform to shelf carbonate, slope-to-basin shale, chert and carbonate turbidites, and submarine volcanic rocks are all represented in Mississippian time. The structural setting of Mississippian sedimentation, volcanism, and mineralization in the Kuna basin may be comparable to documented Devono-Mississippian extensional sags or half-grabens in the subsurface north of the Brooks Range. Climate, terrestrial ecosystems, multiple fluvial-deltaic aquifers, and structural architecture affected the liberation, movement, and redeposition of metals in ways that are incompletely understood.

  7. 'Alice in Wonderland' syndrome as a precursor of depressive disorder.

    PubMed

    Mizuno, M; Kashima, H; Chiba, H; Murakami, M; Asai, M

    1998-01-01

    A 54-year-old Japanese businessman who was found to exhibit the 'Alice in Wonderland' syndrome and went on to develop a depressive disorder is described. Lengthening and shortening of time experience continued intermittently for about 3 months, and metamorphopsia, distortion of body image, and the quick-motion phenomenon (alteration in time sense) persisted for almost 2 days without interruption. There were no abnormal physical findings. The authors review studies on 'Alice in Wonderland' syndrome and suggest that depressive illness may be a causal factor. PMID:9561551

  8. Alice, Benzene, and Coffee: The ABCs of Ecopharmacognosy.

    PubMed

    Cordell, Geoffrey A

    2015-12-01

    The sesquicentennial celebrations of the publication of "Alice's Adventures in Wonderland" and the structure of benzene offer a unique opportunity to develop a contemporary interpretation of aspects of Alice's adventures, illuminate the symbolism of benzene, and contextualize both with the globalization of coffee, transitioning to how the philosophy and sustainable practices of ecopharmacognosy may be applied to modulating approaches to the quality, safety, efficacy, and consistency (QSEC) of traditional medicines and dietary supplements through technology integration, thereby improving patient-centered health care. PMID:26882696

  9. Broad-scale patterns of Brook Trout responses to introduced Brown Trout in New York

    USGS Publications Warehouse

    McKenna, James E.; Slattery, Michael T.; Kean M. Clifford,

    2013-01-01

    Brook Trout Salvelinus fontinalis and Brown Trout Salmo trutta are valuable sport fish that coexist in many parts of the world due to stocking introductions. Causes for the decline of Brook Trout within their native range are not clear but include competition with Brown Trout, habitat alteration, and repetitive stocking practices. New York State contains a large portion of the Brook Trout's native range, where both species are maintained by stocking and other management actions. We used artificial neural network models, regression, principal components analysis, and simulation to evaluate the effects of Brown Trout, environmental conditions, and stocking on the distribution of Brook Trout in the center of their native range. We found evidence for the decline of Brook Trout in the presence of Brown Trout across many watersheds; 22% of sampled reaches where both species were expected to occur contained only Brown Trout. However, a model of the direct relationship between Brook Trout and Brown Trout abundance explained less than 1% of data variation. Ordination showed extensive overlap of Brook Trout and Brown Trout habitat conditions, with only small components of the hypervolume (multidimensional space) being distinctive. Subsequent analysis indicated higher abundances of Brook Trout in highly forested areas, while Brown Trout were more abundant in areas with relatively high proportions of agriculture. Simulation results indicated that direct interactions and habitat conditions were relatively minor factors compared with the effects of repeated stocking of Brown Trout into Brook Trout habitat. Intensive annual stocking of Brown Trout could eliminate resident Brook Trout in less than a decade. Ecological differences, harvest behavior, and other habitat changes can exacerbate Brook Trout losses. Custom stocking scenarios with Brown Trout introductions at relatively low proportions of resident Brook Trout populations may be able to sustain healthy populations of both

  10. AmeriFlux US-Br3 Brooks Field Site 11- Ames

    SciTech Connect

    Parkin, Tim; Prueger, John

    2016-01-01

    This is the AmeriFlux version of the carbon flux data for the site US-Br3 Brooks Field Site 11- Ames. Site Description - The Brooks Field Site 11 - Ames Site is one of three sites (Brooks Field Site 10 and Brooks Field Site 1011) located in a corn/soybean agricultural landscape of central Iowa. The farming systems, associated tillage, and nutrient management practices for soybean/corn production are typical of those throughout Upper Midwest Corn Belt. All three sites are members of the AmeriFlux network. Information for all three can be found in synchronous pages of this website.

  11. AmeriFlux US-Br1 Brooks Field Site 10- Ames

    SciTech Connect

    Parkin, Tim; Prueger, John

    2016-01-01

    This is the AmeriFlux version of the carbon flux data for the site US-Br1 Brooks Field Site 10- Ames. Site Description - The Brooks Field Site 10 - Ames Site is one of three sites (Brooks Field Site 11 and Brooks Field Site 1011) located in a corn/soybean agricultural landscape of central Iowa. The farming systems, associated tillage, and nutrient management practices for soybean/corn production are typical of those throughout Upper Midwest Corn Belt. All three sites are members of the AmeriFlux network. Information for all three can be found in synchronous pages of this website.

  12. Alice in Numberland: Through the Standards in Wonderland

    ERIC Educational Resources Information Center

    Christy, Donna; Lambe, Karen; Payson, Christine; Carnevale, Patricia; Scarpelli, Debra

    2008-01-01

    A whimsical mathematics event for children and adults, derived from Lewis Carroll's Alice's Adventures in Wonderland, was held at the Providence Children's Museum in Rhode Island. NCTM's Standards were the basis of all the activities. (Contains 10 figures and 1 table.)

  13. Enquiring Mind, Rebellious Spirit: Alice and Pinocchio as Nonmodel Children.

    ERIC Educational Resources Information Center

    Lucas, Ann Lawson

    1999-01-01

    Discusses Pinocchio and Alice in Wonderland considering how both characters have acquired a mythic status as iconic images of individualism in childhood. Discusses how they can be termed pivotal since they embodied an abrupt detachment from a long-established tradition in writing for children and a dramatic departure in a radical new direction…

  14. Alice Walker's Politics or the Politics of "The Color Purple."

    ERIC Educational Resources Information Center

    Hamilton, Cynthia

    1988-01-01

    Alice Walker's "The Color Purple" portrays Black women's oppression as the result of patriarchy, and proposes the acceptance of middle-class values--home ownership and entrepreneurship--as the solution to exploitation. She relies on stereotypes to characterize Black men and women, and depicts an ideology of submission. (BJV)

  15. Alice Freeman Palmer: The Evolution of a New Woman.

    ERIC Educational Resources Information Center

    Bordin, Ruth

    This book presents a biographical account of the life of Alice Freeman Palmer (1855-1902) who is credited with expanding academic horizons for women in the United States during the late 19th and early 20th centuries. It tells of the obstacles she confronted as she chose both marriage and a professional career as well as illuminates this…

  16. Alice in Wonderland Syndrome: somesthetic vs visual perceptual disturbance.

    PubMed

    Lanska, John Robert; Lanska, Douglas J

    2013-03-26

    In 1955, English psychiatrist John Todd (1914-1987) described Alice in Wonderland syndrome (AIWS) as self-experienced paroxysmal body image illusions involving distortions of the size, mass, or shape of the patient's own body or its position in space, often occurring with depersonalization and derealization.(1) Todd named AIWS for the perceptual disorder of altered body image experienced by the protagonist in the novel Alice's Adventures in Wonderland (1865), written by Lewis Carroll(2) (the pseudonym of Reverend Charles Lutwidge Dodgson [1832-1898]), possibly based in part on Dodgson's own migrainous experiences.(3) In the story, Alice followed a talking white rabbit down a rabbit hole and then experienced several dramatic changes in her own body size and shape (e.g., shrinking to 10 inches high, growing unnaturally large, and growing unnaturally tall but not any wider).(2) Although Todd's report was the most influential, Lippman(4) provided an earlier description in 1952. In Lippman's article, one of the patients reported feeling short and wide as she walked, and referenced Alice's Adventures in Wonderland in regard to her body image illusions, referring to them as a "Tweedledum" or "Tweedledee" feeling. PMID:23446681

  17. Upgrade of the ALICE Experiment: Letter Of Intent

    NASA Astrophysics Data System (ADS)

    ALICE Collaboration; Abelev, B.; Adam, J.; Adamová, D.; Aggarwal, M. M.; Aglieri Rinella, G.; Agnello, M.; Agostinelli, A.; Agrawal, N.; Ahammed, Z.; Ahmad, N.; Masoodi, A. Ahmad; Ahmed, I.; Ahn, S. U.; Ahn, S. A.; Aimo, I.; Aiola, S.; Ajaz, M.; Akindinov, A.; Aleksandrov, D.; Alessandro, B.; Alexandre, D.; Alici, A.; Alkin, A.; Alme, J.; Alt, T.; Altini, V.; Altinpinar, S.; Altsybeev, I.; Alves Garcia Prado, C.; Anderssen, E. C.; Andrei, C.; Andronic, A.; Anguelov, V.; Anielski, J.; Antičić, T.; Antinori, F.; Antonioli, P.; Aphecetche, L.; Appelshäuser, H.; Arbor, N.; Arcelli, S.; Armesto, N.; Arnaldi, R.; Aronsson, T.; Arsene, I. C.; Arslandok, M.; Augustinus, A.; Averbeck, R.; Awes, T. C.; Azmi, M. D.; Bach, M.; Badala, A.; Baek, Y. W.; Bagnasco, S.; Bailhache, R.; Bairathi, V.; Bala, R.; Baldisseri, A.; Baltasar Dos Santos Pedrosa, F.; Bán, J.; Baral, R. C.; Barbera, R.; Barile, F.; Barnaföldi, G. G.; Barnby, L. S.; Barret, V.; Bartke, J.; Basile, M.; Bastian Van Beelen, J.; Bastid, N.; Basu, S.; Bathen, B.; Batigne, G.; Battistin, M.; Batyunya, B.; Batzing, P. C.; Baudot, J.; Baumann, C.; Bearden, I. G.; Beck, H.; Bedda, C.; Behera, N. K.; Belikov, I.; Bellini, F.; Bellwied, R.; Belmont-Moreno, E.; Bencedi, G.; Benettoni, M.; Benotto, F.; Beole, S.; Berceanu, I.; Bercuci, A.; Berdnikov, Y.; Berenyi, D.; Berger, M. E.; Bertens, R. A.; Berzano, D.; Besson, A.; Betev, L.; Bhasin, A.; Bhati, A. K.; Bhatti, A.; Bhattacharjee, B.; Bhom, J.; Bianchi, L.; Bianchi, N.; Bianchin, C.; Bielčík, J.; Bielčíková, J.; Bilandzic, A.; Bjelogrlic, S.; Blanco, F.; Blau, D.; Blume, C.; Bock, F.; Boehmer, F. V.; Bogdanov, A.; Bøggild, H.; Bogolyubsky, M.; Boldizsár, L.; Bombara, M.; Book, J.; Borel, H.; Borissov, A.; Bornschein, J.; Borshchov, V. N.; Bortolin, C.; Bossú, F.; Botje, M.; Botta, E.; Böttger, S.; Braun-Munzinger, P.; Breitner, T.; Broker, T. A.; Browning, T. A.; Broz, M.; Bruna, E.; Bruno, G. E.; Budnikov, D.; Buesching, H.; Bufalino, S.; Buncic, P.; Busch, O.; Buthelezi, Z.; Caffarri, D.; Cai, X.; Caines, H.; Caliva, A.; Calvo Villar, E.; Camerini, P.; Canoa Roman, V.; Carena, F.; Carena, W.; Cariola, P.; Carminati, F.; Casanova Díaz, A.; Castillo Castellanos, J.; Casula, E. A. R.; Catanescu, V.; Caudron, T.; Cavicchioli, C.; Ceballos Sanchez, C.; Cepila, J.; Cerello, P.; Chang, B.; Chapeland, S.; Charvet, J. L.; Chattopadhyay, S.; Chattopadhyay, S.; Cherney, M.; Cheshkov, C.; Cheynis, B.; Chibante Barroso, V.; Chinellato, D. D.; Chochula, P.; Chojnacki, M.; Choudhury, S.; Christakoglou, P.; Christensen, C. H.; Christiansen, P.; Chujo, T.; Chung, S. U.; Cicalo, C.; Cifarelli, L.; Cindolo, F.; Claus, G.; Cleymans, J.; Colamaria, F.; Colella, D.; Coli, S.; Colledani, C.; Collu, A.; Colocci, M.; Conesa Balbastre, G.; Conesa del Valle, Z.; Connors, M. E.; Contin, G.; Contreras, J. G.; Cormier, T. M.; Corrales Morales, Y.; Cortese, P.; Cortés Maldonado, I.; Cosentino, M. R.; Costa, F.; Crochet, P.; Cruz Albino, R.; Cuautle, E.; Cunqueiro, L.; Dainese, A.; Dang, R.; Danu, A.; Da Riva, E.; Das, D.; Das, I.; Das, K.; Das, S.; Dash, A.; Dash, S.; De, S.; Decosse, C.; DelagrangeI, H.; Deloff, A.; Déenes, E.; D'Erasmo, G.; de Barros, G. O. V.; De Caro, A.; de Cataldo, G.; de Cuveland, J.; De Falco, A.; De Gruttola, D.; De Marco, N.; De Pasquale, S.; De Robertis, G.; De Roo, K.; de Rooij, R.; Diaz Corchero, M. A.; Dietel, T.; Divia, R.; Di Bari, D.; Di Liberto, S.; Di Mauro, A.; Di Nezza, P.; Djuvsland, Ø.; Dobrin, A.; Dobrowolski, T.; Domenicis Gimenez, D.; Dönigus, B.; Dordic, O.; Dorheim, S.; Dorokhov, A.; Doziere, G.; Dubey, A. K.; Dubla, A.; Ducroux, L.; Dulinski, W.; Dupieux, P.; Dutta Majumdar, A. K.; Ehlers, R. J., III; Elia, D.; Engel, H.; Erazmus, B.; Erdal, H. A.; Eschweiler, D.; Espagnon, B.; Estienne, M.; Esumi, S.; Evans, D.; Evdokimov, S.; Eyyubova, G.; Fabris, D.; Faivre, J.; Falchieri, D.; Fantoni, A.; Fasel, M.; Fehlker, D.; Feldkamp, L.; Felea, D.; Feliciello, A.; Feofilov, G.; Ferencei, J.; Fernádez Téllez, A.; Ferreiro, E. G.; Ferretti, A.; Festanti, A.; Figiel, J.; Figueredo, M. A. S.; Filchagin, S.; Finogeev, D.; Fionda, F. M.; Fiore, E. M.; Fiorenza, G.; Floratos, E.; Floris, M.; Foertsch, S.; Foka, P.; Fokin, S.; Fragiacomo, E.; Francescon, A.; Franco, M.; Frankenfeld, U.; Fuchs, U.; Furget, C.; Fusco Girard, M.; Gaardhøje, J. J.; Gagliardi, M.; Gajanana, D.; Gallio, M.; Gangadharan, D. R.; Ganoti, P.; Garabatos, C.; Garcia-Solis, E.; Gargiulo, C.; Garishvili, I.; Gerhard, J.; Germain, M.; Gheata, A.; Gheata, M.; Ghidini, B.; Ghosh, P.; Ghosh, S. K.; Gianotti, P.; Giubilato, P.; Giubellino, P.; Gladysz-Dziadus, E.; Glässel, P.; Gomez, R.; Gomez Marzoa, M.; Gonzáalez-Zamora, P.; Gorbunov, S.; Görlich, L.; Gotovac, S.; Graczykowski, L. K.; Grajcarek, R.; Greiner, L. C.; Grelli, A.; Grigoras, A.; Grigoras, C.; Grigoriev, V.; Grigoryan, A.; Grigoryan, S.; Grinyov, B.; Grion, N.; Grondin, D.; Grosse-Oetringhaus, J. F.; Grossiord, J.-Y.; Grosso, R.; Guber, F.; Guernane, R.; Guerzoni, B.; Guilbaud, M.; Gulbrandsen, K.; Gulkanyan, H.; Gunji, T.; Gupta, A.; Gupta, R.; Khan, K. H.; Haake, R.; Haaland, Ø.; Hadjidakis, C.; Haiduc, M.; Hamagaki, H.; Hamar, G.; Hanratty, L. D.; Hansen, A.; Harris, J. W.; Hartmann, H.; Harton, A.; Hatzifotiadou, D.; Hayashi, S.; Heckel, S. T.; Heide, M.; Helstrup, H.; Hennes, E.; Herghelegiu, A.; Herrera Corral, G.; Hess, B. A.; Hetland, K. F.; Hicks, B.; Hillemanns, H.; Himmi, A.; Hippolyte, B.; Hladky, J.; Hristov, P.; Huang, M.; Hu-Guo, C.; Humanic, T. J.; Hutter, D.; Hwang, D. S.; Igolkin, S.; Ijzermans, P.; Ilkaev, R.; Ilkiv, I.; Inaba, M.; Incani, E.; Innocenti, G. M.; Ionita, C.; Ippolitov, M.; Irfan, M.; Ivanov, M.; Ivanov, V.; Ivanytskyi, O.; Jachołkowski, A.; Jadlovsky, J.; Jahnke, C.; Jang, H. J.; Janik, M. A.; Jayarathna, P. H. S. Y.; Jena, S.; Jimenez Bustamante, R. T.; Jones, P. G.; Jung, H.; Junique, A.; Jusko, A.; Kalcher, S.; Kalinak, P.; Kalweit, A.; Kamin, J.; Kang, J. H.; Kaplin, V.; Kar, S.; Karasu Uysal, A.; Karavichev, O.; Karavicheva, T.; Karpechev, E.; Kebschull, U.; Keidel, R.; Keil, M.; Ketzer, B.; Khan, M. Mohisin.; Khan, P.; Khan, S. A.; Khanzadeev, A.; Kharlov, Y.; Kileng, B.; Kim, B.; Kim, D.; Kim, D. W.; Kim, D. J.; Kim, J. S.; Kim, M.; Kim, M.; Kim, S.; Kim, T.; Kirsch, S.; Kisel, I.; Kiselev, S.; Kisiel, A.; Kiss, G.; Klay, J. L.; Klein, J.; Klein-Bösing, C.; Kluge, A.; Knichel, M. L.; Knospe, A. G.; Kobdaj, C.; Kofarago, M.; Köhler, M. K.; Kollegger, T.; Kolojvari, A.; Kondratiev, V.; Kondratyeva, N.; Konevskikh, A.; Kovalenko, V.; Kowalski, M.; Kox, S.; Koyithatta Meethaleveedu, G.; Kral, J.; Králik, I.; Kramer, F.; Kravčáková, A.; Krelina, M.; Kretz, M.; Krivda, M.; Krizek, F.; Krus, M.; Krymov, E. B.; Kryshen, E.; Krzewicki, M.; Kučera, V.; Kucheriaev, Y.; Kugathasan, T.; Kuhn, C.; Kuijer, P. G.; Kulakov, I.; Kumar, J.; Kurashvili, P.; Kurepin, A.; Kurepin, A. B.; Kuryakin, A.; Kushpil, S.; Kushpil, V.; Kweon, M. J.; Kwon, Y.; Ladron de Guevara, P.; Lagana Fernandes, C.; Lakomov, I.; Langoy, R.; Lara, C.; Lardeux, A.; Lattuca, A.; La Pointe, S. L.; La Rocca, P.; Lea, R.; Lee, G. R.; Legrand, I.; Lehnert, J.; Lemmon, R. C.; Lenhardt, M.; Lenti, V.; Leogrande, E.; Leoncino, M.; León Monzón, I.; Lesenechal, Y.; Lévai, P.; Li, S.; Lien, J.; Lietava, R.; Lindal, S.; Lindenstruth, V.; Lippmann, C.; Lisa, M. A.; Listratenko, O. M.; Ljunggren, H. M.; Lodato, D. F.; Loddo, F.; Loenne, P. I.; Loggins, V. R.; Loginov, V.; Lohner, D.; Loizides, C.; Lopez, X.; López Torres, E.; Lu, X.-G.; Luettig, P.; Lunardon, M.; Luo, J.; Luparello, G.; Luzzi, C.; Gago, A. M.; Jacobs, P. M.; Ma, R.; Maevskaya, A.; Mager, M.; Mahapatra, D. P.; Maire, A.; Malaev, M.; Maldonado Cervantes, I.; Malinina, L.; Mal'kevich, D.; Maltsev, N. A.; Malzacher, P.; Mamonov, A.; Manceau, L.; Manko, V.; Manso, F.; Manzari, V.; Mapelli, A.; Marchisone, M.; Mareš, J.; Margagliotti, G. V.; Margotti, A.; Marín, A.; Marin Tobon, C. A.; Markert, C.; Marquard, M.; Marras, D.; Martashvili, I.; Martin, N. A.; Martinengo, P.; Martínez, M. I.; Martínez García, G.; Blanco, J. Martin; Martynov, Y.; Mas, A.; Masciocchi, S.; Masera, M.; Maslov, M.; Masoni, A.; Massacrier, L.; Mastroserio, A.; Mattiazzo, S.; Matyja, A.; Mayer, C.; Mazer, J.; Mazumder, R.; Mazza, G.; Mazzoni, M. A.; Meddi, F.; Menchaca-Rocha, A.; Mercado Pérez, J.; Meres, M.; Miake, Y.; Mikhaylov, K.; Milano, L.; Milosevic, J.; Mischke, A.; Mishra, A. N.; Miśkowiec, D.; Mitu, C. M.; Mlynarz, J.; Mohanty, B.; Molnar, L.; Mongelli, M.; Montanõ Zetina, L.; Montes, E.; Morando, M.; Moreira De Godoy, D. A.; Morel, F.; Moretto, S.; Morreale, A.; Morsch, A.; Muccifora, V.; Mudnic, E.; Bhopal, F. Muhammad; Muhuri, S.; Mukherjee, M.; Müller, H.; Munhoz, M. G.; Murray, S.; Musa, L.; Musinsky, J.; Nandi, B. K.; Nania, R.; Nappi, E.; Nattrass, C.; Nayak, T. K.; Nazarenko, S.; Nedosekin, A.; Nicassio, M.; Niculescu, M.; Nielsen, B. S.; Nikolaev, S.; Nikulin, S.; Nikulin, V.; Nilsen, B. S.; Noferini, F.; Nomokonov, P.; Nooren, G.; Nyanin, A.; Nystrand, J.; Oeschler, H.; Oh, S.; Oh, S. K.; Okatan, A.; Olah, L.; Oleniacz, J.; Oliveira Da Silva, A. C.; Onderwaater, J.; Oppedisano, C.; Ortiz Velasquez, A.; Oskarsson, A.; Otwinowski, J.; Oyama, K.; Pachmayer, Y.; Pachr, M.; Pagano, P.; Paíc, G.; Painke, F.; Pajares, C.; Pal, S. K.; Palmeri, A.; Panati, S.; Pant, D.; Pantano, D.; Papikyan, V.; Pappalardo, G. S.; Park, W. J.; Passfeld, A.; Pastore, C.; Patalakha, D. I.; Paticchio, V.; Paul, B.; Pawlak, T.; Peitzmann, T.; Pereira Da Costa, H.; Pereira De Oliveira Filho, E.; Peresunko, D.; Pérez Lara, C. E.; Peryt, I. W.; Pesci, A.; Pestov, Y.; Petagna, P.; Petráček, V.; Petran, M.; Petris, M.; Petrovici, M.; Petta, C.; Pham, H.; Piano, S.; Pikna, M.; Pillot, P.; Pinazza, O.; Pinsky, L.; Piyarathna, D. B.; Płoskoń, M.; Planinic, M.; Pluta, J.; Pochybova, S.; Podesta-Lerma, P. L. M.; Poghosyan, M. G.; Pohjoisaho, E. H. O.; Polichtchouk, B.; Poljak, N.; Pop, A.; Porteboeuf-Houssais, S.; Porter, J.; Pospisil, V.; Potukuchi, B.; Prasad, S. K.; Preghenella, R.; Prino, F.; Protsenko, M. A.; Pruneau, C. A.; Pshenichnov, I.; Puddu, G.; Puggioni, C.; Punin, V.; Putschke, J.; Qvigstad, H.; Rachevski, A.; Raha, S.; Rak, J.; Rakotozafindrabe, A.; Ramello, L.; Raniwala, R.; Raniwala, S.; Räsänen, S. S.; Rascanu, B. T.; Rasson, J. E.; Rathee, D.; Rauf, A. W.; Razazi, V.; Read, K. F.; Real, J. S.; Redlich, K.; Reed, R. J.; Rehman, A.; Reichelt, P.; Reicher, M.; Reidt, F.; Renfordt, R.; Reolon, A. R.; Reshetin, A.; Rettig, F.; Revol, J.-P.; Reygers, K.; Riabov, V.; Ricci, R. A.; Richert, T.; Richter, M.; Riedler, P.; Riegler, W.; Riggi, F.; Rivetti, A.; Rocco, E.; Rodríguez Cahuantzi, M.; Rodriguez Manso, A.; Røed, K.; Rogochaya, E.; Rohni, S.; Rohr, D.; Röhrich, D.; Romita, R.; Ronchetti, F.; Ronflette, L.; Rosnet, P.; Rossegger, S.; Rossewij, M. J.; Rossi, A.; Roudier, S.; Rousset, J.; Roy, A.; Roy, C.; Roy, P.; Rubio Montero, A. J.; Rui, R.; Russo, R.; Ryabinkin, E.; Ryabov, Y.; Rybicki, A.; Sacchetti, M.; Sadovsky, S.; Šafařík, K.; Sahlmuller, B.; Sahoo, R.; Sahu, P. K.; Saini, J.; Salgado, C. A.; Salzwedel, J.; Sambyal, S.; Samsonov, V.; Sanchez Castro, X.; Sánchez Rodríguez, F. J.; Šándor, L.; Sandoval, A.; Sano, M.; Santagati, G.; Santoro, R.; Sarkar, D.; Scapparone, E.; Scarlassara, F.; Scharenberg, R. P.; Schiaua, C.; Schicker, R.; Schipper, J. D.; Schmidt, C.; Schmidt, H. R.; Schuchmann, S.; Schukraft, J.; Schulc, M.; Schuster, T.; Schutz, Y.; Schwarz, K.; Schweda, K.; Scioli, G.; Scomparin, E.; Scott, P. A.; Scott, R.; Segato, G.; Seger, J. E.; Selyuzhenkov, I.; Senyukhov, S.; Seo, J.; Serradilla, E.; Sevcenco, A.; Sgura, I.; Shabetai, A.; Shabratova, G.; Shahoyan, R.; Shangaraev, A.; Sharma, N.; Sharma, S.; Shigaki, K.; Shtejer, K.; Sibiriak, Y.; Siddhanta, S.; Siemiarczuk, T.; Silvermyr, D.; Silvestre, C.; Simatovic, G.; Singaraju, R.; Singh, R.; Singha, S.; Singhal, V.; Sinha, B. C.; Sinha, T.; Sitar, B.; Sitta, M.; Skaali, T. B.; Skjerdal, K.; Smakal, R.; Smirnov, N.; Snellings, R. J. M.; Snoeys, W.; Søgaard, C.; Soltz, R.; Song, J.; Song, M.; Soramel, V. Sooden F.; Sorensen, S.; Spacek, M.; Špalek, J.; Spiriti, E.; Sputowska, I.; Spyropoulou-Stassinaki, M.; Srivastava, B. K.; Stachel, J.; Stan, I.; Stefanek, G.; Steinpreis, M.; Stenlund, E.; Steyn, G.; Stiller, J. H.; Stocco, D.; Stolpovskiy, M.; Strmen, P.; Suaide, A. A. P.; Subieta Vasquez, M. A.; Sugitate, T.; Suire, C.; Suleymanov, M.; Šuljić, M.; Sultanov, R.; Šumbera, M.; Sun, X.; Susa, T.; Symons, T. J. M.; Szanto de Toledo, A.; Szarka, I.; Szczepankiewicz, A.; Szymanski, M.; Takahashi, J.; Tangaro, M. A.; Tapia Takaki, J. D.; Tarantola Peloni, A.; Tarazona Martinez, A.; Tauro, A.; Tejeda Muñoz, G.; Telesca, A.; Terrevoli, C.; Ter Minasyan, A.; Thäder, J.; Thomas, D.; Tieulent, R.; Timmins, A. R.; Toia, A.; Torii, H.; Trubnikov, V.; Trzaska, W. H.; Tsuji, T.; Tumkin, A.; Turchetta, R.; Turrisi, R.; Tveter, T. S.; Tymchuk, I. T.; Ulery, J.; Ullaland, K.; Uras, A.; Usai, G. L.; Vajzer, M.; Vala, M.; Palomo, L. Valencia; Valentino, V.; Valin, I.; Vallero, S.; Vande Vyvre, P.; Vannucci, L.; Van Der Maarel, J.; Van Hoorne, J. W.; van Leeuwen, M.; Vargas, A.; Varma, R.; Vasileiou, M.; Vasiliev, A.; Vasta, P.; Vechernin, V.; Veldhoen, M.; Velure, A.; Venaruzzo, M.; Vercellin, E.; Vergara Limón, S.; Verlaat, B.; Vernet, R.; Verweij, M.; Vickovic, L.; Viesti, G.; Viinikainen, J.; Vilakazi, Z.; Villalobos Baillie, O.; Vinogradov, A.; Vinogradov, L.; Vinogradov, Y.; Virgili, T.; Viyogi, Y. P.; Vodopyanov, A.; Völkl, M. A.; Voloshin, K.; Voloshin, S. A.; Volpe, G.; von Haller, B.; Vorobyev, I.; Vranic, D.; Vrláková, J.; Vulpescu, B.; Vyushin, A.; Wagner, B.; Wagner, J.; Wagner, V.; Wang, M.; Wang, Y.; Watanabe, D.; Weber, M.; Wessels, J. P.; Westerhoff, U.; Wiechula, J.; Wikne, J.; Wilde, M.; Wilk, G.; Wilkinson, J.; Williams, M. C. S.; Windelband, B.; Winn, M.; Winter, M.; Xiang, C.; Yaldo, C. G.; Yamaguchi, Y.; Yang, H.; Yang, P.; Yang, S.; Yano, S.; Yasnopolskiy, S.; Yi, J.; Yin, Z.; Yoo, I.-K.; Yushmanov, I.; Zaccolo, V.; Zach, C.; Zaman, A.; Zampolli, C.; Zaporozhets, S.; Zarochentsev, A.; Závada, P.; Zaviyalov, N.; Zbroszczyk, H.; Zgura, I. S.; Zhalov, M.; Zhang, F.; Zhang, H.; Zhang, X.

    2014-08-01

    ALICE (A Large Ion Collider Experiment) is studying the physics of strongly interacting matter, and in particular the properties of the Quark-Gluon Plasma (QGP), using proton-proton, proton-nucleus and nucleus-nucleus collisions at the CERN LHC (Large Hadron Collider). The ALICE Collaboration is preparing a major upgrade of the experimental apparatus, planned for installation in the second long LHC shutdown in the years 2018-2019. These plans are presented in the ALICE Upgrade Letter of Intent, submitted to the LHCC (LHC experiments Committee) in September 2012. In order to fully exploit the physics reach of the LHC in this field, high-precision measurements of the heavy-flavour production, quarkonia, direct real and virtual photons, and jets are necessary. This will be achieved by an increase of the LHC Pb-Pb instant luminosity up to 6×1027 cm-2s-1 and running the ALICE detector with the continuous readout at the 50 kHz event rate. The physics performance accessible with the upgraded detector, together with the main detector modifications, are presented.

  18. Award for Distinguished Scientific Contributions: Alice H. Eagly

    ERIC Educational Resources Information Center

    American Psychologist, 2009

    2009-01-01

    Alice H. Eagly, winner of the Award for Distinguished Scientific Contributions, is cited for her work in the field of social psychology, the psychology of gender, and the use of meta-analytic techniques. She envisions a psychology that extends from individual cognitions to societal structures. In addition to the citation, a biography and selected…

  19. The Sky Is No Longer the Limit for Alice

    ERIC Educational Resources Information Center

    Monge, Louise

    2016-01-01

    In March 2016, representatives from Australian Science Teachers Association (ASTA) were invited to BHP Billiton's head office in Melbourne, Australia, to listen to astronautical engineer and NASA New Horizons Mission Operations Manager Alice Bowman discuss her career trajectory and the role her choices in education played in her success. Alice…

  20. Hydrologic conditions in the Jacobs Creek, Stony Brook, and Beden Brook drainage basins, west-central New Jersey, 1986-88

    USGS Publications Warehouse

    Jacobsen, Eric; Hardy, M.A.; Kurtz, B.A.

    1993-01-01

    Data on the quantity and quality of groundwater and surface water in the drainage basins of Jacobs Creek, Stony Brook, and Beden Brook upstream from U.S. Route 206 in west-central New Jersey were collected from October 1, 1986, through September 30, 1988. Water levels measured in 74 wells ranged from 49 to 453 ft above sea level. The water-table surface generally mimicked topography; however, the water-level altitude in one well indicates the possibility of local interbasin groundwater flow. Calcium and bicarbonate were the most abundant cation and anion in most of the 25 groundwater samples. With one exception, concentrations of nutrients, trace elements, organic carbon, and volatile organic compounds in groundwater samples were less than U.S. Environmental Protection Agency primary drinking-water regulations. Stream low-flow measurements made twice at each of 63 sites indicate that both discharge and runoff increased downstream for most reaches of Jacobs Creek, Stony Brook, and Beden Brook. For main-stem sites, the highest base-flow runoff occurred at site 01462733 on Jacobs Creek; the greatest discharge was measured at site 01401100 on Stony Brook. The flow-duration curve for Stony Brook for 1987-88 indicates a wetter- than-normal period for the area. Results of surface-water-quality analyses indicate that calcium and sodium plus potassium were the dominant or codominant cations, and bicarbonate and chloride were the dominant or codominant anions in most samples. Concentrations of nutrients typically exceeded those needed to support surplus algal growth. Concentrations of trace elements generally were less than U.S. Environmental Protection Agency primary drinking-water regulations. Bottom-sediment samples contained several persistent organic compounds. Significant downstream variations were found in concentrations of copper and lead in Jacobs Creek and Stony Brook. Results of macroinvertebrate community sampling indicate an input of nutrients to several stream

  1. Spatial and temporal movement dynamics of brook Salvelinus fontinalis and brown trout Salmo trutta

    USGS Publications Warehouse

    Davis, L.A.; Wagner, Tyler; Barton, Meredith L.

    2015-01-01

    Native eastern brook trout Salvelinus fontinalis and naturalized brown trout Salmo trutta occur sympatrically in many streams across the brook trout’s native range in the eastern United States. Understanding within- among-species variability in movement, including correlates of movement, has implications for management and conservation. We radio tracked 55 brook trout and 45 brown trout in five streams in a north-central Pennsylvania, USA watershed to quantify the movement of brook trout and brown trout during the fall and early winter to (1) evaluate the late-summer, early winter movement patterns of brook trout and brown trout, (2) determine correlates of movement and if movement patterns varied between brook trout and brown trout, and (3) evaluate genetic diversity of brook trout within and among study streams, and relate findings to telemetry-based observations of movement. Average total movement was greater for brown trout (mean ± SD = 2,924 ± 4,187 m) than for brook trout (mean ± SD = 1,769 ± 2,194 m). Although there was a large amount of among-fish variability in the movement of both species, the majority of movement coincided with the onset of the spawning season, and a threshold effect was detected between stream flow and movement: where movement increased abruptly for both species during positive flow events. Microsatellite analysis of brook trout revealed consistent findings to those found using radio-tracking, indicating a moderate to high degree of gene flow among brook trout populations. Seasonal movement patterns and the potential for relatively large movements of brook and brown trout highlight the importance of considering stream connectivity when restoring and protecting fish populations and their habitats.

  2. Water resources of Brookings and Kingsbury counties, South Dakota

    USGS Publications Warehouse

    Hamilton, L.J.

    1989-01-01

    Surface water and groundwater resources are widely distributed in Brookings and Kingsbury Counties, an area of nearly 1,700 sq mi of glaciated plains of the Coteau des Prairies plateau in eastern South Dakota. The resources are relatively undeveloped except for large withdrawals for irrigation from shallow glacial aquifers. Groundwater withdrawals accounted for 90% of the 16 ,000 acre-ft of water withdrawn in 1985. The Big Sioux River drains an area of about 2,400 sq mi and flows southward through Brookings County. Discharge of the Big Sioux River near Brookings has averaged 117,000 acre-ft/yr but can decrease to 17 ,600 acre-ft/yr during drought periods. West of the river are thousands of shallow ponds, marshes, and lakes. The largest, Lake Thompson in central Kingsbury County, rose nearly 20 ft during 1985-86 because of record precipitation and large overflow from upstream lakes. Six major glacial aquifers of outwash sand and gravel store 8 million acre-ft of fresh to slightly saline, very hard water beneath nearly 1,300 sq mi at depths ranging from land surface to more than 700 ft. Concentrations of dissolved solids and hardness of water from the aquifers exceed 1,000 mg/L at many places. The 600 sq mi of the surficial, freshwater Big Sioux and Vermillion East Fork aquifers contain more than 200 large-capacity wells that can be pumped from 200 to as much as 1,300 gal/min. Three extensive bedrock aquifers store 67 million acre-ft of slightly saline, soft water at depths ranging from 320 to 1,300 ft. Maximum yields for wells in the sandstone of the Codell and Dakota aquifers are estimated to be 100 gal/min. (USGS)

  3. Proposed standard-weight equations for brook trout

    USGS Publications Warehouse

    Hyatt, M.W.; Hubert, W.A.

    2001-01-01

    Weight and length data were obtained for 113 populations of brook trout Salvelinus fontinalis across the species' geographic range in North America to estimate a standard-weight (Ws) equation for this species. Estimation was done by applying the regression-line-percentile technique to fish of 120-620 mm total length (TL). The proposed metric-unit (g and mm) equation is log10Ws = -5.186 + 3.103 log10TL; the English-unit (lb and in) equivalent is log10Ws = -3.483 + 3.103 log10TL. No systematic length bias was evident in the relative-weight values calculated from these equations.

  4. Histopathology of fish. IV. A granuloma of brook trout

    USGS Publications Warehouse

    Wood, E.M.; Yasutake, W.T.

    1956-01-01

    In the summer of 1952, Snieszko and Griffin (1955) diagnosed kidney disease in brook trout from the Fish and Wildlife Service's station at Berlin, New Hampshire. During the examination of these fish, a peculiar lesion was observed in the vicinity of the gastric caeca. In very advanced cases, hard, glistening, white masses of tissue bearing a striking resemblance to mature testes often filled the abdominal cavity. In the initial examinations, the material was actually mistaken for normal testicular tissue. Subsequently, it was recognized as an entirely aberrant, proliferating tumor-like mass.

  5. 75 FR 426 - Notice of Application for Disclaimer of Interest, Brookings County, SD

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-01-05

    ... Bureau of Land Management Notice of Application for Disclaimer of Interest, Brookings County, SD AGENCY... Recordable Disclaimer of Interest from the United States for an easement in Brookings County, South Dakota... Recordable Disclaimer of Interest, if issued, will confirm that the United States has no valid interest...

  6. The Why, What, and Impact of GPA at Oxford Brookes University

    ERIC Educational Resources Information Center

    Andrews, Matthew

    2016-01-01

    This paper examines the introduction at Oxford Brookes University of a Grade Point Average (GPA) scheme alongside the traditional honours degree classification. It considers the reasons for the introduction of GPA, the way in which the scheme was implemented, and offers an insight into the impact of GPA at Brookes. Finally, the paper considers…

  7. Sustaining a Rural Black Farming Community in the South: A Portrait of Brooks Farm, Mississippi.

    ERIC Educational Resources Information Center

    Grim, Valerie; Effland, Anne B. W.

    1997-01-01

    Brooks Farm is an independent Black farming community unique in the Mississippi Delta. A community case study shows that, despite declining population and resources, Brooks Farm has drawn on the strength of its traditional institutions (family, churches, civic groups) to sustain community life and to continue to provide services to the elderly,…

  8. Geochemical evidence for a brooks range mineral belt, Alaska

    USGS Publications Warehouse

    Marsh, S.P.; Cathrall, J.B.

    1981-01-01

    Geochemical studies in the central Brooks Range, Alaska, delineate a regional, structurally controlled mineral belt in east-west-trending metamorphic rocks and adjacent metasedimentary rocks. The mineral belt extends eastward from the Ambler River quadrangle to the Chandalar and Philip Smith quadrangles, Alaska, from 147?? to 156??W. longitude, a distance of more than 375 km, and spans a width from 67?? to 69??N. latitude, a distance of more than 222 km. Within this belt are several occurrences of copper and molybdenum mineralization associated with meta-igneous, metasedimentary, and metavolcanic rocks; the geochemical study delineates target areas for additional occurrences. A total of 4677 stream-sediment and 2286 panned-concentrate samples were collected in the central Brooks Range, Alaska, from 1975 to 1979. The -80 mesh ( 2.86) nonmagnetic fraction of the panned concentrates from stream sediment were analyzed by semiquantitative spectrographic methods. Two geochemical suites were recognized in this investigation; a base-metal suite of copper-lead-zinc and a molybdenum suite of molybdenum-tin-tungsten. These suites suggest several types of mineralization within the metamorphic belt. Anomalies in molybdenum with associated Cu and W suggest a potential porphyry molybdenum system associated with meta-igneous rocks. This regional study indicates that areas of metaigneous rocks in the central metamorphic belt are target areas for potential mineralized porphyry systems and that areas of metavolcanic rocks are target areas for potential massive sulfide mineralization. ?? 1981.

  9. Heritability of Morphology in Brook Trout with Variable Life Histories

    PubMed Central

    Varian, Anna; Nichols, Krista M.

    2010-01-01

    Distinct morphological variation is often associated with variation in life histories within and among populations of both plants and animals. In this study, we examined the heritability of morphology in three hatchery strains of brook trout (Salvelinus fontinalis), which were historically or are currently used for stocking and supplementation of both migratory and resident ecotypes in the upper Great Lakes region. In a common garden experiment, significant variation in body morphology was observed within and across populations sampled at three time periods. The most notable differences among strains were differences in dorso-ventral body depth and the shape of the caudal peduncle, with some differences in the anterior-posterior placement of the dorsal and ventral fins. Variation with and among 70 half-sib families indicates that heritabilities of morphology and body size were significant at most developmental time points both within and across strains. Heritabilities for morphological characters within strains ranged from 0 to 0.95 across time points. Significant within-strain heritabilities for length ranged from 0 to 0.93 across time points and for weight ranged from 0 to 0.88. Significant additive genetic variation exists within and across hatchery brook trout strains for morphology and size, indicating that these traits are capable of responding to natural or artificial selection. PMID:20886080

  10. Lower Paleozoic and Proterozoic rocks of Southern Brooks Range, Alaska

    SciTech Connect

    Dillion, J.T.

    1985-04-01

    Lower Paleozoic or Proterozoic basement rocks occur in windows and thrust plates in several areas of the Brooks Range. Uranium-lead radiometric analyses of highly metamorphosed rocks from the Baird Mountains and Ernie Lake area have yielded Proterozoic ages. Structural, stratigraphic, petrologic, and isotopic evidence exists for Proterozoic(.) rocks in the schist belt; around the Chandalar, Arrigetch,and Igikpak plutons; and in the Cosmos Hills window. Fossiliferous, Lower Paleozoic, low-grade metasedimentary rocks occur in the Romanzof Mountains, Doonerak window, and Baird Mountains, and may also surround the Chandalar plutons. Locally, the Lower Paleozoic rocks are unconformably overlain by Devonian to Mississippian metasediments and may stratigraphically overlie older, higher grade metamorphic rocks. Similarities in the stratigraphic settings and lithologies and in fossil ages and affinities allow correlation of the Lower Paleozoic rocks in the southern Brooks Range. Correlation of Lower Paleozoic rocks exposed beneath the Endicott allochthon at the Doonerak fenster with coeval rocks in an overlying thrust plate to the south at Snowsden Mountain is especially significant. A west-trending thrust fault, which is rooted in Lower Paleozoic basement, along the north side of Snowsden Mountain is postulated to account for these relationships. Apparently, the Endicott allochthon roots beneath the Snowsden Mountain thrust fault. Evidence form conodont samples currently being studied by A. Harris may bear on the extent of the Lower Paleozoic rocks in the upper plate of the Snowsden Mountain thrust and in the Chandalar area.

  11. Rooted Brooks Range ophiolite: Implications for Cordilleran terranes

    USGS Publications Warehouse

    Saltus, R.W.; Morin, R.L.; Hudson, T.L.

    2001-01-01

    Modeling of gravity and magnetic data shows that areally extensive mafic and ultramafic rocks of the western Brooks Range, Alaska, are at least 8 km thick, and that gabbro and ultramafic rocks underlie basalt in several places. The basalt, gabbro, and ultramafic rocks have been considered parts of a far-traveled ophiolite assemblage. These rocks are the highest structural elements in the Brooks Range thrust belt and are thought to be hundreds of kilometers north of their origin. This requires these rocks to be thin klippen without geologic ties to the continental shelf sedimentary rocks that now surround them. The geophysically determined, thick and interleaved subsurface character of the basalt, gabbro, and ultramafic rocks is inconsistent with this interpretation. An origin within an extensional setting on the continental shelf could produce the required subsurface geometries and explain other perplexing characteristics of these rocks. Early Mesozoic Alaska, from the North Slope southward to the interior, may have had many irregular extensional basins on a broad, distal continental shelf. This original tectonic setting may apply elsewhere in Cordilleran-type margins where appropriate mafic and ultramafic analogs are present.

  12. Lyme neuroborreliosis presenting as Alice in Wonderland syndrome.

    PubMed

    Binalsheikh, Ibrahim M; Griesemer, David; Wang, Sonya; Alvarez-Altalef, Rebeca

    2012-03-01

    We describe a 7-year-old boy with Alice in Wonderland syndrome associated with Lyme disease. He presented with metamorphopsia and auditory hallucinations in the absence of previous tick bites or other signs of Lyme disease. The boy never developed clinical seizures, and electroencephalograms during these spells indicated no epileptic activity. There was no history of migraine. Cranial magnetic resonance imaging produced normal results. Lyme serology tested positive in both serum and cerebrospinal fluid. He was treated with intravenous ceftriaxone for 3 weeks, with complete resolution of signs. This case report is the first, to our knowledge, of neuroborreliosis presenting as Alice in Wonderland syndrome with complete resolution of findings after intravenous antibiotic treatment. PMID:22353296

  13. Asymmetric Gaussian steering: When Alice and Bob disagree

    SciTech Connect

    Midgley, S. L. W.; Ferris, A. J.; Olsen, M. K.

    2010-02-15

    Asymmetric steering is an effect whereby an inseparable bipartite system can be found to be described by either quantum mechanics or local hidden variable theories depending on which one of Alice or Bob makes the required measurements. We show that, even with an inseparable bipartite system, situations can arise where Gaussian measurements on one half are not sufficient to answer the fundamental question of which theory gives an adequate description and the whole system must be considered. This phenomenon is possible because of an asymmetry in the definition of the original Einstein-Podolsky-Rosen paradox and in this article we show theoretically that it may be demonstrated, at least in the case where Alice and Bob can only make Gaussian measurements, using the intracavity nonlinear coupler.

  14. Status of Fast Interaction Trigger for ALICE Upgrade

    NASA Astrophysics Data System (ADS)

    Karavicheva, T. L.; Kurepin, A. B.; Trzaska, W. H.

    2015-06-01

    As a result of the LHC upgrade after the Long Shutdown 2, the expected luminosity and collision rate during the so called Run 3 will considerably exceed the design parameters for several of the key ALICE detectors systems including the forward trigger detectors. Furthermore, the introduction of a new Muon Forward Tracker significantly reduces the space envelope available for the upgraded Fast Interaction Trigger (FIT) detector on the muon spectrometer side. At the same time, FIT is expected to match and even exceed the functionality and performance currently secured by three ALICE sub-detectors: the time zero detector (T0), the VZERO system, and the Forward Multiplicity Detector (FMD). The harsh conditions of Run 3 would accelerate the ageing and radiation damage (detectable already during Run 1) of the FIT detector if we were to use standard PMTs. The solution came thanks to the latest developments in MCP-PMT technology providing compact photo sensors with excellent characteristics and stability.

  15. The Alice in Wonderland syndrome in juvenile migraine.

    PubMed

    Golden, G S

    1979-04-01

    Two children are reported who had recurrent attacks of impairment of time sense, body image, and visual analysis of the environment. These occurred with a clear state of consciousness and in the absence of any evidence of an encephalitic process, seizures, drug ingestion, or psychiatric illness. Both children had recurrent headaches; one was clearly migrainous. There was a family history of migraine in both cases. These children represent examples of the Alice in Wonderland syndrome in juvenile migraine. PMID:440858

  16. Anti–nuclei production at the LHC measured with ALICE

    NASA Astrophysics Data System (ADS)

    Bufalino, Stefania; ALICE Collaboration

    2016-05-01

    The excellent tracking and particle identification capabilities of the ALICE apparatus combined with the high particle production rates reached at the LHC in pp, p–Pb and in particular in Pb–Pb collisions allow for detailed study of the production of nuclei and anti-nuclei. In this paper, recent results on the production of the (anti-)deuteron and (anti-)helium are presented and compared with the expectations from statistical (thermal) particle production and coalescence models.

  17. Development of a TPC detector for the ALICE experiment

    NASA Astrophysics Data System (ADS)

    Bächler, Joachim; Bracinik, Juraj; Fischer, Hans Gerhard; Flammier, Marcel; Janik, Rudolf; Claude Legrand, Jean; Musa, Luciano; Pikna, Miroslav; Sitar, Branislav; Szymanski, Piotr

    1998-12-01

    A proportional chamber with ring cathode readout is foreseen for the ALICE Time Projection Chamber. It offers low gas gain operation, lightweight construction and good pulse shape. The Tape Automatic Bonding (TAB) process makes it possible to mount the VLSI analog front end electronics directly on the back face of the multilayer board carrying the ring cathode elements, yielding high channel density. At the same time, simulation work is done. Construction and first results will be presented.

  18. GRID Processing and analysis of ALICE data at distributed Russian Tier2 centre - RDIG

    NASA Astrophysics Data System (ADS)

    Bogdanov, A.; Jancurova, L.; Kiryanov, A.; Kotlyar, V.; Mitsyn, V.; Lyublev, Y.; Ryabinkin, E.; Shabratova, G.; Stepanova, L.; Tikhomirov, V.; Trofimov, V.; Urazmetov, W.; Utkin, D.; Zarochentsev, A.; Zotkin, S.

    2010-04-01

    The major subject of this paper is the presentation of the distributed computing status report for the ALICE experiment at Russian sites just before the data taking at the Large Hadron Collider in CERN. We present the usage of the ALICE application software, AliEn[1], at the top of the modern EGEE middleware called gLite for the simulation and data analysis in the experiment at the Russian Tier2 in accordance with the ALICE computing model [2]. We outline the results of CPU and disk space usage at RDIG sites for the data simulation and analysis of first LHC data from the exposition of ALICE detector.

  19. The C-RORC PCIe card and its application in the ALICE and ATLAS experiments

    NASA Astrophysics Data System (ADS)

    Borga, A.; Costa, F.; Crone, G. J.; Engel, H.; Eschweiler, D.; Francis, D.; Green, B.; Joos, M.; Kebschull, U.; Kiss, T.; Kugel, A.; Panduro Vazquez, J. G.; Soos, C.; Teixeira-Dias, P.; Tremblet, L.; Vande Vyvre, P.; Vandelli, W.; Vermeulen, J. C.; Werner, P.; Wickens, F. J.

    2015-02-01

    The ALICE and ATLAS DAQ systems read out detector data via point-to-point serial links into custom hardware modules, the ALICE RORC and ATLAS ROBIN. To meet the increase in operational requirements both experiments are replacing their respective modules with a new common module, the C-RORC. This card, developed by ALICE, implements a PCIe Gen 2 x8 interface and interfaces to twelve optical links via three QSFP transceivers. This paper presents the design of the C-RORC, its performance and its application in the ALICE and ATLAS experiments.

  20. The ALICE High Level Trigger: status and plans

    NASA Astrophysics Data System (ADS)

    Krzewicki, Mikolaj; Rohr, David; Gorbunov, Sergey; Breitner, Timo; Lehrbach, Johannes; Lindenstruth, Volker; Berzano, Dario

    2015-12-01

    The ALICE High Level Trigger (HLT) is an online reconstruction, triggering and data compression system used in the ALICE experiment at CERN. Unique among the LHC experiments, it extensively uses modern coprocessor technologies like general purpose graphic processing units (GPGPU) and field programmable gate arrays (FPGA) in the data flow. Realtime data compression is performed using a cluster finder algorithm implemented on FPGA boards. These data, instead of raw clusters, are used in the subsequent processing and storage, resulting in a compression factor of around 4. Track finding is performed using a cellular automaton and a Kalman filter algorithm on GPGPU hardware, where both CUDA and OpenCL technologies can be used interchangeably. The ALICE upgrade requires further development of online concepts to include detector calibration and stronger data compression. The current HLT farm will be used as a test bed for online calibration and both synchronous and asynchronous processing frameworks already before the upgrade, during Run 2. For opportunistic use as a Grid computing site during periods of inactivity of the experiment a virtualisation based setup is deployed.

  1. River mainstem thermal regimes influence population structuring within an Appalachian brook trout population

    USGS Publications Warehouse

    Aunins, Aaron W.; Petty, J. Todd; King, Timothy L.; Schilz, Mariya; Mazik, Patricia M.

    2015-01-01

    Brook trout (Salvelinus fontinalis) often exist as highly differentiated populations, even at small spatial scales, due either to natural or anthropogenic sources of isolation and low rates of dispersal. In this study, we used molecular approaches to describe the unique population structure of brook trout inhabiting the Shavers Fork watershed, located in eastern West Virginia, and contrast it to nearby populations in tributaries of the upper Greenbrier River and North Fork South Branch Potomac Rivers. Bayesian and maximum likelihood clustering methods identified minimal population structuring among 14 collections of brook trout from throughout the mainstem and tributaries of Shavers Fork, highlighting the role of the cold-water mainstem for connectivity and high rates of effective migration among tributaries. In contrast, the Potomac and Greenbrier River collections displayed distinct levels of population differentiation among tributaries, presumably resulting from tributary isolation by warm-water mainstems. Our results highlight the importance of protecting and restoring cold-water mainstem habitats as part of region-wide brook trout conservation efforts. In addition, our results from Shavers Fork provide a contrast to previous genetic studies that characterize Appalachian brook trout as fragmented isolates rather than well-mixed populations. Additional study is needed to determine whether the existence of brook trout as genetically similar populations among tributaries is truly unique and whether connectivity among brook trout populations can potentially be restored within other central Appalachian watersheds.

  2. Stony Brook's Graduate Courses in Clear, Vivid, Conversational Communication

    NASA Astrophysics Data System (ADS)

    Bass, E.

    2011-12-01

    Graduate students in the sciences at Stony Brook University are taking for-credit courses to learn to communicate more effectively about science with people outside their disciplines, including public officials, the press, students, potential funders and employers, colleagues in other fields, and the general public. Five Communicating Science courses are offered; two more will be added in January, 2012. The courses are offered by the School of Journalism and developed by the Center for Communicating Science (CCS). This interdisciplinary center was founded in 2009, with the participation of Alan Alda, the actor, writer, director and longtime advocate for science, who is a Visiting Professor at Stony Brook. At the core of the program are three 1-credit (14-hour) modules that rely on experiential learning, repeated practice and immediate, interactive feedback. In Distilling Your Message, students practice speaking clearly, vividly and conversationally about their work at different levels of complexity and formality to different audiences, using storytelling techniques where appropriate. In Writing for the Public, they extend these skills into writing. In Improvisation for Scientists, the most unconventional of the courses, students play improvisational theater games to help themselves connect more directly, personally and responsively with their audiences. In their first two semesters, the courses are expected to serve about 90 students, taking a total of about 180 credits. Most of the courses have filled quickly, mixing master's and doctoral students from more than a dozen fields, including marine and atmospheric sciences. Three to six credits of Communicating Science courses are required for students in two programs, an MA in Marine Conservation and Policy and an Advanced Certificate in Health Communications. The content and methods of the courses are based largely on lessons learned from evaluations of all-day workshops that CCS has conducted for more than 250

  3. Decontamination of the Plum Brook Reactor Facility Hot Cells

    SciTech Connect

    Peecook, K.M.

    2008-07-01

    The NASA Plum Brook Reactor Facility decommissioning project recently completed a major milestone with the successful decontamination of seven hot cells. The cells included thick concrete walls and leaded glass windows, manipulator arms, inter cell dividing walls, and roof slabs. There was also a significant amount of embedded conduit and piping that had to be cleaned and surveyed. Prior to work starting evaluation studies were performed to determine whether it was more cost effective to do this work using a full up removal approach (rip and ship) or to decontaminate the cells to below required clean up levels, leaving the bulk of the material in place. This paper looks at that decision process, how it was implemented, and the results of that effort including the huge volume of material that can now be used as fill during site restoration rather than being disposed of as LLRW. (authors)

  4. Geological mapping in Doonerak Fenster, Central Brooks Range, Alaska

    SciTech Connect

    Mull, C.C.; Adams, K.E.; Dillon, J.T.

    1985-04-01

    Mapping of the north flank of the Doonerak fenster has traced the Amawk thrust, the sole fault of the Endicott Mountains allochthon, from the North Fork of the Koyukuk River - Mount Doonerak area eastward for more than 40 km (25 mi) to the east plunge of the Doonerak anticline at Koyuktuvuk Creek near the Dietrich River. Mapping has concentrated on the structural style of the area and on the autochthonous or parautochthonous Carboniferous Lisburne Group, Kayak shale, Kekiktuk Conglomerate - which are present along most of the anticline - and Triassic Karen Creek Sandstone, Triassic Shublik Formation, and Permian-Triassic Sadlerochit Group - which are present only in the west. This Triassic to Mississippian section closely resembles the coeval autochthonous to Parautochthonous Ellesmerian section of the subsurface to the north and in the Brooks Range to the northeast.

  5. Structural architecture of the central Brooks Range foothills, Alaska

    USGS Publications Warehouse

    Moore, Thomas E.; Potter, Christopher J.; O'Sullivan, Paul B.

    2002-01-01

    Five structural levels underlie the Brooks Range foothills, from lowest to highest: (1) autochthon, at a depth of ~9 km; (2) Endicott Mountains allochthon (EMA), thickest under the northern Brooks Range (>15 km) and wedging out northward above the autochthon; (3) higher allochthons (HA), with a composite thickness of 1.5+ km, wedging out northward at or beyond the termination of EMA; (4) Aptian-Albian Fortress Mountain Formation (FM), deposited unconformably on deformed EMA and HA and thickening northward into a >7-km-thick succession of deformed turbidites (Torok Formation); (5) gently folded Albian-Cenomanian deltaic deposits (Nanushuk Group). The dominant faulting pattern in levels 2-3 is thin-skinned thrusting and thrust-related folds formed before deposition of Cretaceous strata. These structures are cut by younger steeply south-dipping reverse faults that truncate and juxtapose structural levels 1-4 and expose progressively deeper structural levels to the south. Structural levels 4-5 are juxtaposed along a north-dipping zone of south-vergent folds and thrusts. Stratigraphic and fission-track age data suggest a kinematic model wherein the foothills belt was formed first, by thrusting of HA and EMA as deformational wedges onto the regionally south-dipping authochon at 140-120Ma. After deposition of FM and Torok during mid-Cretaceous hinterland extension and uplift, a second episode of contractional deformation at 60 Ma shortened the older allochthonous deformational wedges (EMA, HA) and overlying strata on north-vergent reverse faults. To the north, where the allochthons wedge out, shortening caused duplexing in the Torok and development of a triangle zone south of the Tuktu escarpment.

  6. Folklore in the Fiction of Alice Walker: A Perpetuation of Historical and Literary Traditions

    ERIC Educational Resources Information Center

    Harris, Trudier

    1977-01-01

    Discusses the fiction of Alice Walker, showing that, in employing folklore for the purposes of defining characters, illustrating relationships among them, and developing plot, Alice Walker comments on the racial situation in the United States, often chastising her black characters for their attitudes toward themselves. (JM)

  7. Alice Buckton (1867-1944): The Legacy of a Froebelian in the Landscape of Glastonbury

    ERIC Educational Resources Information Center

    Mathivet, Stephanie

    2006-01-01

    Alice Buckton was a Froebelian educator who was involved in early childhood education and the training of teachers. She was a prolific writer, at first writing articles for the Froebelian journal "Child Life" and later writing poetry and plays, which were read and performed in London and elsewhere. Alice Buckton became interested in the spiritual…

  8. JPL stories: story on the story (series) Careering through JPL, presented by Alice M. Fairhurst

    NASA Technical Reports Server (NTRS)

    Hendrickson, S.

    2002-01-01

    Alice Fairhurst, co-author of Effective Teaching, Effective Learning, presented an enthusiastic overview of her tenure as a JPL career development and mentoring coordinator (1991-2001). Among other things, Alice is an expert in Keirseyian Temperament and Myers-Briggs typology.

  9. Proton-proton physics with the ALICE muon spectrometer at the LHC

    SciTech Connect

    Bastid, N.

    2008-09-15

    ALICE, the dedicated heavy-ion experiment at the LHC, has also an important proton-proton physics program. The ALICE muon spectrometer will be presented and the corresponding physics analysis will be reviewed. A particular emphasis will be placed on heavy-flavor measurement.

  10. Radiometric performance results of the New Horizons' ALICE UV imaging spectrograph

    NASA Astrophysics Data System (ADS)

    Slater, David C.; Davis, Michael W.; Olkin, Catherine B.; Scherrer, John; Stern, S. Alan

    2005-09-01

    We describe the radiometric performance and calibration results of the New Horizons' ALICE flight model. This ALICE is a lightweight (4.4 kg), low-power (4.4 W), ultraviolet spectrograph based on the ALICE instrument now in flight aboard the European Space Agency's Rosetta spacecraft. Its primary job will be to detect a variety of important atomic and molecular species in Pluto's atmosphere, and to determine their relative abundances so that a complete picture of Pluto's atmospheric composition can be determined for the first time. ALICE will also be used to search for an atmosphere around Pluto's moon, Charon, as well as the Kuiper Belt Objects (KBOs) New Horizons hopes to fly by after Pluto-Charon. Detailed radiometric performance results of the ALICE flight model are presented and discussed.

  11. Predicting Brook Trout occurrence in stream reaches throughout their native range in the eastern United States

    USGS Publications Warehouse

    DeWeber, Jefferson Tyrell; Wagner, Tyler

    2015-01-01

    The Brook Trout Salvelinus fontinalis is an important species of conservation concern in the eastern USA. We developed a model to predict Brook Trout population status within individual stream reaches throughout the species’ native range in the eastern USA. We utilized hierarchical logistic regression with Bayesian estimation to predict Brook Trout occurrence probability, and we allowed slopes and intercepts to vary among ecological drainage units (EDUs). Model performance was similar for 7,327 training samples and 1,832 validation samples based on the area under the receiver operating curve (∼0.78) and Cohen's kappa statistic (0.44). Predicted water temperature had a strong negative effect on Brook Trout occurrence probability at the stream reach scale and was also negatively associated with the EDU average probability of Brook Trout occurrence (i.e., EDU-specific intercepts). The effect of soil permeability was positive but decreased as EDU mean soil permeability increased. Brook Trout were less likely to occur in stream reaches surrounded by agricultural or developed land cover, and an interaction suggested that agricultural land cover also resulted in an increased sensitivity to water temperature. Our model provides a further understanding of how Brook Trout are shaped by habitat characteristics in the region and yields maps of stream-reach-scale predictions, which together can be used to support ongoing conservation and management efforts. These decision support tools can be used to identify the extent of potentially suitable habitat, estimate historic habitat losses, and prioritize conservation efforts by selecting suitable stream reaches for a given action. Future work could extend the model to account for additional landscape or habitat characteristics, include biotic interactions, or estimate potential Brook Trout responses to climate and land use changes.

  12. Giant American brook lampreys, Lampetra lamottei, in the upper Great Lakes

    USGS Publications Warehouse

    Manion, Patrick J.; Purvis, Harold A.

    1971-01-01

    Five female American brook lampreys, Lampetra lamottei, collected in lakes Michigan and Huron averaged nearly twice as long and about six times as heavy as American brook lampreys of normal size. Three factors suggested that the giant lampreys may have fed parasitically after metamorphosis: morphological adaptations of the species for parasitic life, their large size, and absence of extremely large ammocetes among a million sampled.

  13. Pingos in the Brooks Range, northern Alaska, U.S.A.

    USGS Publications Warehouse

    Hamilton, T.D.; Obi, Curtis M.

    1982-01-01

    Some 70 pingos occur at 27 separate localities within and near the Brooks Range. The pingos are distributed through mountain valleys at altitudes up to 725m and in terrain glaciated as recently as late Wisconsinan time. Pingos are particularly abundant in the Koyukuk and Chandalar drainage systems of the south-central Brooks Range, where they may be associated with structural features of regional extent.-from Authors

  14. Landscape models of brook trout abundance and distribution in lotic habitat with field validation

    USGS Publications Warehouse

    McKenna, James E.; Johnson, James H.

    2011-01-01

    Brook trout Salvelinus fontinalis are native fish in decline owing to environmental changes. Predictions of their potential distribution and a better understanding of their relationship to habitat conditions would enhance the management and conservation of this valuable species. We used over 7,800 brook trout observations throughout New York State and georeferenced, multiscale landscape condition data to develop four regionally specific artificial neural network models to predict brook trout abundance in rivers and streams. Land cover data provided a general signature of human activity, but other habitat variables were resistant to anthropogenic changes (i.e., changing on a geological time scale). The resulting models predict the potential for any stream to support brook trout. The models were validated by holding 20% of the data out as a test set and by comparison with additional field collections from a variety of habitat types. The models performed well, explaining more than 90% of data variability. Errors were often associated with small spatial displacements of predicted values. When compared with the additional field collections (39 sites), 92% of the predictions were off by only a single class from the field-observed abundances. Among “least-disturbed” field collection sites, all predictions were correct or off by a single abundance class, except for one where brown trout Salmo trutta were present. Other degrading factors were evident at most sites where brook trout were absent or less abundant than predicted. The most important habitat variables included landscape slope, stream and drainage network sizes, water temperature, and extent of forest cover. Predicted brook trout abundances were applied to all New York streams, providing a synoptic map of the distribution of brook trout habitat potential. These fish models set benchmarks of best potential for streams to support brook trout under broad-scale human influences and can assist with planning and

  15. Spatial and seasonal dynamics of brook trout populations inhabiting a central Appalachian watershed

    USGS Publications Warehouse

    Petty, J.T.; Lamothe, P.J.; Mazik, P.M.

    2005-01-01

    We quantified the watershed-scale spatial population dynamics of brook trout Salvelinus fontinalis in the Second Fork, a third-order tributary of Shavers Fork in eastern West Virginia. We used visual surveys, electrofishing, and mark-recapture techniques to quantify brook trout spawning intensity, population density, size structure, and demographic rates (apparent survival and immigration) throughout the watershed. Our analyses produced the following results. Spawning by brook trout was concentrated in streams with small basin areas (i.e., segments draining less than 3 km2), relatively high alkalinity (>10 mg CaCO3/L), and high amounts of instream cover. The spatial distribution of juvenile and small-adult brook trout within the watershed was relatively stable and was significantly correlated with spawning intensity. However, no such relationship was observed for large adults, which exhibited highly variable distribution patterns related to seasonally important habitat features, including instream cover, stream depth and width, and riparian canopy cover. Brook trout survival and immigration rates varied seasonally, spatially, and among size-classes. Differential survival and immigration tended to concentrate juveniles and small adults in small, alkaline streams, whereas dispersal tended to redistribute large adults at the watershed scale. Our results suggest that spatial and temporal variations in spawning, survival, and movement interact to determine the distribution, abundance, and size structure of brook trout populations at a watershed scale. These results underscore the importance of small tributaries for the persistence of brook trout in this watershed and the need to consider watershed-scale processes when designing management plans for Appalachian brook trout populations. ?? Copyright by the American Fisheries Society 2005.

  16. Common read-out receiver card for ALICE Run2

    NASA Astrophysics Data System (ADS)

    Engel, H.; Kebschull, U.

    2013-12-01

    ALICE at CERN LHC uses custom FPGA-based computer plug-in cards as interface between the optical detector read-out link and the PC clusters of Data Acquisition (DAQ) and High-Level Trigger (HLT). The cards used at DAQ and HLT during Run1 have been developed as independent projects and are now facing similar problems with obsolete major interfaces and limited link speeds and processing capabilities. A new common card has been developed to enable the upgrade of the read-out chain towards higher link rates while providing backward compatibility with the current architecture. First prototypes could be tested successfully and raised interest from other collaborations.

  17. The upgrade of the Inner Tracking System of ALICE

    NASA Astrophysics Data System (ADS)

    Siddhanta, Sabyasachi

    2014-11-01

    ALICE has devised a comprehensive upgrade strategy to enhance its physics capabilities and to exploit the LHC running conditions after the second long shutdown of the LHC scheduled in 2018-2019. Within this upgrade programme, the upgrade of the Inner Tracking System (ITS) forms an important part. The upgraded ITS will have a barrel geometry consisting of seven layers of Monolithic Active Pixel Sensors (MAPS) with high granularity, which would fulfil the material budget, readout and radiation hardness requirements for the upgrade. In this contribution, an overview of the upgraded ITS, its technology and performance studies are presented.

  18. Analysis of cosmic-ray events with ALICE at LHC

    NASA Astrophysics Data System (ADS)

    Rodríguez Cahuantzi, M.

    2015-08-01

    ALICE is one of the four main experiments of the LHC at CERN. Located 40 meters underground, with 30 m of overburden rock, it can also operate to detect muons produced by cosmic-ray interactions in the atmosphere. An analysis of the data collected with cosmic-ray triggers from 2010 to 2013, corresponding to about 31 days of live time, is presented. Making use of the ability of the Time Projection Chamber (TPC) to track large numbers of charged particles, a special emphasis is given to the study of muon bundles, and in particular to events with high-muon density.

  19. Non-indigenous brook trout and the demise of Pacific salmon: a forgotten threat?

    PubMed Central

    Levin, Phillip S; Achord, Stephen; Feist, Blake E; Zabel, Richard W

    2002-01-01

    Non-indigenous species may be the most severe environmental threat the world now faces. Fishes, in particular, have been intentionally introduced worldwide and have commonly caused the local extinction of native fish. Despite their importance, the impact of introduced fishes on threatened populations of Pacific salmon has never been systemically examined. Here, we take advantage of several unique datasets from the Columbia River Basin to address the impact of non-indigenous brook trout, Salvelinus fontinalis, on threatened spring/summer-run chinook salmon, Oncorhynchus tshawytscha. More than 41 000 juvenile chinook were individually marked, and their survival in streams without brook trout was nearly double the survival in streams with brook trout. Furthermore, when brook trout were absent, habitat quality was positively associated with chinook survival, but when brook trout were present no relationship between chinook survival and habitat quality was evident. The difference in juvenile chinook survival between sites with, and without, brook trout would increase population growth rate (lambda) by ca. 2.5%. This increase in lambda would be sufficient to reverse the negative population growth observed in many chinook populations. Because many of the populations we investigated occur in wilderness areas, their habitat has been considered pristine; however, our results emphasize that non-indigenous species are present and may have a dramatic impact, even in remote regions that otherwise appear pristine. PMID:12204126

  20. Movement patterns of Brook Trout in a restored coastal stream system in southern Massachusetts

    USGS Publications Warehouse

    Snook, Erin L.; Letcher, Benjamin H.; Dubreuil, Todd L.; Zydlewski, Joseph; O'Donnell, Matthew J.; Whiteley, Andrew R.; Hurley, Stephen T.; Danylchuk, Andy J.

    2016-01-01

    Coastal Brook Trout (Salvelinus fontinalis) populations are found from northern Canada to New England. The extent of anadromy generally decreases with latitude, but the ecology and movements of more southern populations are poorly understood. We conducted a 33-month acoustic telemetry study of Brook Trout in Red Brook, MA, and adjacent Buttermilk Bay (marine system) using 16 fixed acoustic receivers and surgically implanting acoustic transmitters in 84 individuals. Tagged Brook Trout used the stream, estuary (50% of individuals) and bay (10% of individuals). Movements into full sea water were brief when occurring. GAMM models revealed that transitions between habitat areas occurred most often in spring and fall. Environmental data suggest that use of the saline environment is limited by summer temperatures in the bay. Movements may also be related to moon phase. Compared to more northern coastal populations of Brook Trout, the Red Brook population appears to be less anadromous overall, yet the estuarine segment of the system may have considerable ecological importance as a food resource.

  1. Learning to Communicate Science: Stony Brook University's Approach

    NASA Astrophysics Data System (ADS)

    Bass, E.

    2012-12-01

    Stony Brook University offers an unusual series of short courses to help science graduate students learn to communicate more effectively about science with people outside their disciplines, including the public, public officials, potential funders and employers, students, the press, and colleagues in other fields. The courses include six 1-credit (14-hour) modules in oral and written communication that rely on practice and interactive feedback. More than 120 master's and PhD students, from more than 16 departments, have taken at least one of the courses since spring 2011. Most students who try one module end up taking two or three. An additional course for medical and nursing students was added in fall 2012. The courses are offered in the School of Journalism and were developed by the Center for Communicating Science (CCS). CCS was founded in 2009, with the participation of Alan Alda, the actor, writer, and longtime advocate for science, who is a Visiting Professor at Stony Brook. The Communicating Science courses have received strong institutional support and enthusiastic reviews. They are required by two programs, an MA in Marine Conservation and Policy and an Advanced Certificate in Health Communications. Two successive Provosts have subsidized course costs for PhD students, and Graduate School leaders are working to establish a steady funding stream to allow expansion of the program. Our aspiration at CCS is for every science graduate student to receive some training in communicating about science to the public. Several factors have helped in establishing the program: --CCS' multidisciplinary nature helped build support, with participation by faculty from across the campus, including not only the natural sciences, engineering, and medicine, but journalism, theatre arts, and the Writing Program, as well as nearby Brookhaven National Laboratory and Cold Spring Harbor Laboratory. --Before offering courses, CCS conducted all-day workshops and high

  2. Enterococcus rivorum sp. nov., from water of pristine brooks.

    PubMed

    Niemi, R Maarit; Ollinkangas, Tuula; Paulin, Lars; Svec, Pavel; Vandamme, Peter; Karkman, Antti; Kosina, Marcel; Lindström, Kristina

    2012-09-01

    A significant number of Enterococcus strains from pristine waters of two brooks in Finland formed a distinct cluster on the basis of whole-cell protein fingerprinting by one-dimensional SDS-PAGE. The strains shared the following characteristics. Cells were ovoid, Gram-positive-staining and non-spore-forming, appearing singly or in pairs or chains. They were facultatively anaerobic and catalase-negative. Growth in broth containing 6.5 % NaCl or at 45 °C was weak or absent. Production of D antigen was variable. The strains tolerated 60 °C for 30 min, 40 % bile and tellurite, hydrolysed aesculin strongly and gelatin weakly, produced no acid from hippurate and did not reduce it, grew weakly at 10 °C, showed a strong reaction for the Voges-Proskauer test and produced acid from methyl α-d-glucoside, mannitol, sorbitol and sucrose, with weak or no production of acid from methyl α-d-mannoside, l-arabinose, gluconate and l-xylose. Several of the strains were selected for identification on the basis of sequencing of almost the whole 16S rRNA gene and partial atpA and pheS genes and of (GTG)(5)-PCR fingerprints. Partial atpA and pheS gene sequencing was also performed for those type strains of Enterococcus species without available sequences in the database. The pristine brook isolates formed a novel species, for which the name Enterococcus rivorum sp. nov. (type strain S299(T) = HAMBI 3055(T) = LMG 25899(T) = CCM 7986(T)) is proposed. On the basis of 16S rRNA gene sequence similarity, E. rivorum sp. nov. is related to the Enterococcus faecalis genogoup. It is distinguished from described Enterococcus species on the basis of 16S rRNA, atpA and pheS gene sequences and whole-cell protein and (GTG)(5)-PCR fingerprints. It is most closely related to E. faecalis, but DNA-DNA hybridization confirms it to represent a novel species.

  3. Level II scour analysis for Bridge 54 (RANDTH00BR0054) on Brook Street, crossing Thayer Brook, Randolph, Vermont

    USGS Publications Warehouse

    Olson, Scott A.

    1996-01-01

    This report provides the results of a detailed Level II analysis of scour potential at structure RANDTH00BR0054 on Brook Street crossing Thayer Brook, Randolph, Vermont (figures 1–8). A Level II study is a basic engineering analysis of the site, including a quantitative analysis of stream stability and scour (U.S. Department of Transportation, 1993). A Level I study is included in Appendix E of this report. A Level I study provides a qualitative geomorphic characterization of the study site. Information on the bridge available from VTAOT files was compiled prior to conducting Level I and Level II analyses and can be found in Appendix D. The site is in the Green Mountain physiographic division of central Vermont in the town of Randolph. The 5.39-mi2 drainage area is in a predominantly rural basin. In the vicinity of the study site, the immediate banks are forested. In the study area, Thayer Brook has an incised, sinuous channel with a slope of approximately 0.03 ft/ft, an average channel top width of 60 ft and an average channel depth of 3 ft. The predominant channel bed materials are gravel and cobble (D50 is 42.4 mm or 0.139 ft). The geomorphic assessment at the time of the Level I and Level II site visits on August 3, 1994 and December 5, 1994, indicated that the reach was vertically and laterally unstable. This assessment was due to the extreme channel misalignment with the bridge opening and the presence of a drop structure downstream of the bridge protecting against channel degradation. The Brook Street crossing of Thayer Brook is a 34-ft-long, two-lane bridge consisting of one 31-foot concrete span (Vermont Agency of Transportation, written communication, August 2, 1994). The bridge is supported by vertical, concrete abutments with wingwalls. Streamflow attacks the upstream right wingwall and has undermined the upstream end of the right abutment. Type-2 stone fill (less than 36 inches diameter) exists only on the upstream and downstream sides of the left

  4. The PRE-Derived NMR Model of the 38.8-kDa Tri-Domain IsdH Protein from Staphylococcus aureus Suggests That It Adaptively Recognizes Human Hemoglobin.

    PubMed

    Sjodt, Megan; Macdonald, Ramsay; Spirig, Thomas; Chan, Albert H; Dickson, Claire F; Fabian, Marian; Olson, John S; Gell, David A; Clubb, Robert T

    2016-03-27

    Staphylococcus aureus is a medically important bacterial pathogen that, during infections, acquires iron from human hemoglobin (Hb). It uses two closely related iron-regulated surface determinant (Isd) proteins to capture and extract the oxidized form of heme (hemin) from Hb, IsdH and IsdB. Both receptors rapidly extract hemin using a conserved tri-domain unit consisting of two NEAT (near iron transporter) domains connected by a helical linker domain. To gain insight into the mechanism of extraction, we used NMR to investigate the structure and dynamics of the 38.8-kDa tri-domain IsdH protein (IsdH(N2N3), A326-D660 with a Y642A mutation that prevents hemin binding). The structure was modeled using long-range paramagnetic relaxation enhancement (PRE) distance restraints, dihedral angle, small-angle X-ray scattering, residual dipolar coupling and inter-domain NOE nuclear Overhauser effect data. The receptor adopts an extended conformation wherein the linker and N3 domains pack against each other via a hydrophobic interface. In contrast, the N2 domain contacts the linker domain via a hydrophilic interface and, based on NMR relaxation data, undergoes inter-domain motions enabling it to reorient with respect to the body of the protein. Ensemble calculations were used to estimate the range of N2 domain positions compatible with the PRE data. A comparison of the Hb-free and Hb-bound forms reveals that Hb binding alters the positioning of the N2 domain. We propose that binding occurs through a combination of conformational selection and induced-fit mechanisms that may promote hemin release from Hb by altering the position of its F helix.

  5. Radiation hard analog circuits for ALICE ITS upgrade

    NASA Astrophysics Data System (ADS)

    Gajanana, D.; Gromov, V.; Kuijer, P.; Kugathasan, T.; Snoeys, W.

    2016-03-01

    The ALICE experiment is planning to upgrade the ITS (Inner Tracking System) [1] detector during the LS2 shutdown. The present ITS will be fully replaced with a new one entirely based on CMOS monolithic pixel sensor chips fabricated in TowerJazz CMOS 0.18 μ m imaging technology. The large (3 cm × 1.5 cm = 4.5 cm2) ALPIDE (ALICE PIxel DEtector) sensor chip contains about 500 Kpixels, and will be used to cover a 10 m2 area with 12.5 Gpixels distributed over seven cylindrical layers. The ALPOSE chip was designed as a test chip for the various building blocks foreseen in the ALPIDE [2] pixel chip from CERN. The building blocks include: bandgap and Temperature sensor in four different flavours, and LDOs for powering schemes. One flavour of bandgap and temperature sensor will be included in the ALPIDE chip. Power consumption numbers have dropped very significantly making the use of LDOs less interesting, but in this paper all blocks are presented including measurement results before and after irradiation with neutrons to characterize robustness against displacement damage.

  6. [Obligatory and facultative symptoms of the Alice in wonderland syndrome].

    PubMed

    Podoll, K; Ebel, H; Robinson, D; Nicola, U

    2002-08-01

    The Alice in Wonderland syndrome (AIWS), as described by Todd in 1955, denotes a variety of self-experienced paroxysmal body schema disturbances (obligatory core symptoms of the AIWS) which may co-occur with depersonalization, derealization, visual illusions and disorders of the time perception (facultative symptoms of the AIWS). The name comes, of course, from Lewis Carroll's 1865 novel "Alice's Adventures in Wonderland", which is believed to have been inspired by Carroll's own migraine experiences documented as early as 1856. Recent studies of the AIWS occurring as somesthetic migraine aura indicated that the body schema disturbance of macrosomatognosia most frequently affects the head and upper extremities, paralleling the extension of their representation in the human brain. As a misapprehension commonly encountered in the medical literature, it has been suggested to define the AIWS by the presence of visual rather than somesthetic perceptual disturbances, e.g. metamorphopsia and/or visual hallucinations, but this change and broadening of Todd's definition of the AIWS turns it to a both scientifically and clinically useless concept. PMID:12207198

  7. Front-end Electronics for the ALICE Calorimeters

    SciTech Connect

    Aamodt, K.; Awes, Terry C; Enokizono, Akitomo; Silvermyr, David O; Zhang, Chun; Young, Glenn R; The, ALICE

    2010-05-01

    The ALICE calorimeters PHOS and EMCal are based on Avalanche Photo-Diode (APD) photosensors with Charge Sensitive Preamplifiers (CSP) for readout of the scintillating elements. The amplified signals are read out via 32-channel shaper/digitizer front-end electronics (FEE) with 14-bit effective dynamic range. The electronics is based on second order shapers with dual gain for each channel, getting digitized by ALTRO chips. Each APD channel is equipped with an individual 10-bit APD gain adjustment and 2 x 2 channel clusters generate a 100 ns shaped analog sums output (Fast OR) for the associated Trigger Region Units (TRU). The Fast OR signals are generated by first order shapers with a dynamic range of 12-bit given by the ADC in the TRU cards. Board controller firmware in the FPGA provides local monitoring and configuration of all parameters via the ALICE DCS system. The signal to noise ratio for MIP at 215 MeV is {approx}7 per channel with a noise level of 30 MeV at room temperature for a dynamic range of 80 GeV for PHOS, and the fast-OR RMS noise level is about 75 MeV for a dynamic range of 250 GeV for EMCal.

  8. Managing operational documentation in the ALICE Detector Control System

    NASA Astrophysics Data System (ADS)

    Lechman, M.; Augustinus, A.; Bond, P.; Chochula, P.; Kurepin, A.; Pinazza, O.; Rosinsky, P.

    2012-12-01

    ALICE (A Large Ion Collider Experiment) is one of the big LHC (Large Hadron Collider) experiments at CERN in Geneve, Switzerland. The experiment is composed of 18 sub-detectors controlled by an integrated Detector Control System (DCS) that is implemented using the commercial SCADA package PVSSII. The DCS includes over 1200 network devices, over 1,000,000 monitored parameters and numerous custom made software components that are prepared by over 100 developers from all around the world. This complex system is controlled by a single operator via a central user interface. One of his/her main tasks is the recovery of anomalies and errors that may occur during operation. Therefore, clear, complete and easily accessible documentation is essential to guide the shifter through the expert interfaces of different subsystems. This paper describes the idea of the management of the operational documentation in ALICE using a generic repository that is built on a relational database and is integrated with the control system. The experience gained and the conclusions drawn from the project are also presented.

  9. Experiences and evolutions of the ALICE DAQ Detector Algorithms framework

    NASA Astrophysics Data System (ADS)

    Chapeland, Sylvain; Carena, Franco; Carena, Wisla; Chibante Barroso, Vasco; Costa, Filippo; Denes, Ervin; Divia, Roberto; Fuchs, Ulrich; Grigore, Alexandru; Simonetti, Giuseppe; Soos, Csaba; Telesca, Adriana; Vande Vyvre, Pierre; von Haller, Barthelemy

    2012-12-01

    ALICE (A Large Ion Collider Experiment) is the heavy-ion detector studying the physics of strongly interacting matter and the quark-gluon plasma at the CERN LHC (Large Hadron Collider). The 18 ALICE sub-detectors are regularly calibrated in order to achieve most accurate physics measurements. Some of these procedures are done online in the DAQ (Data Acquisition System) so that calibration results can be directly used for detector electronics configuration before physics data taking, at run time for online event monitoring, and offline for data analysis. A framework was designed to collect statistics and compute calibration parameters, and has been used in production since 2008. This paper focuses on the recent features developed to benefit from the multi-cores architecture of CPUs, and to optimize the processing power available for the calibration tasks. It involves some C++ base classes to effectively implement detector specific code, with independent processing of events in parallel threads and aggregation of partial results. The Detector Algorithm (DA) framework provides utility interfaces for handling of input and output (configuration, monitored physics data, results, logging), and self-documentation of the produced executable. New algorithms are created quickly by inheritance of base functionality and implementation of few ad-hoc virtual members, while the framework features are kept expandable thanks to the isolation of the detector calibration code. The DA control system also handles unexpected processes behaviour, logs execution status, and collects performance statistics.

  10. Exploring Jet-Hadron correlations at the LHC with ALICE

    NASA Astrophysics Data System (ADS)

    Mazer, Joel

    2016-08-01

    In relativistic heavy ion collisions at the Large Hadron Collider (LHC), the conditions are met to produce the hot and dense, strongly interacting medium known as the Quark Gluon Plasma (QGP). The QGP, a state of matter created shortly after the Big Bang, is a phase where the deconfinement of quarks and gluons is hypothesized. Jets, the collimated sprays of hadrons from fragmenting partons, are a key probe of the medium. The experimental methods used for jet measurements at ALICE to remove, reduce, and correct for the underlying background event will be presented. In pp collisions, jet production is well understood within the framework of perturbative QCD and acts as a rigorous baseline measurement for jet quenching measurements. By comparing to heavy ion collision systems, we can study the suppression of the number of jets seen and study the modification of the pT or angular distributions of jet fragments. Azimuthal angular correlations of charged hadrons with respect to the axis of a full (charged + neutral) reconstructed (trigger) jet in Pb-Pb and pp collisions at √sNN = 2.76 TeV in ALICE will be presented here. Newly developed combinatoric background subtraction methods and their improvement compared to prior techniques will be discussed.

  11. Alice G. Brandfonbrener, MD-A personal remembrance.

    PubMed

    Lederman, Richard J

    2014-09-01

    Alice Brandfonbrener died peacefully at home on May 31, 2014, after a protracted illness. For all of us involved in performing arts medicine, she was the inspiration and guiding spirit. She will be missed. [Alice Brandfonbrener was one of the founding members of the field of performing arts medicine, perhaps the most critical founding member. In 1983, she organized the first "Conference on the Medical Problems of Musicians" in Aspen, Colorado, and co-directed these for the next 20 years. These symposia led to the formation of the Performing Arts Medicine Association, of which Dr. Brandfonbrener was the first president, and in 1986, establishment of the first journal in the field--this journal, Medical Problems of Performing Artists--for which she served as Editor for 20 years. At her performing arts clinic in Chicago, she saw and treated thousands of musicians, from young students to world-renowned professionals, and mentored many students and professionals who would extend research and practice in performing arts medicine.].

  12. Intrusion Prevention and Detection in Grid Computing - The ALICE Case

    NASA Astrophysics Data System (ADS)

    Gomez, Andres; Lara, Camilo; Kebschull, Udo

    2015-12-01

    Grids allow users flexible on-demand usage of computing resources through remote communication networks. A remarkable example of a Grid in High Energy Physics (HEP) research is used in the ALICE experiment at European Organization for Nuclear Research CERN. Physicists can submit jobs used to process the huge amount of particle collision data produced by the Large Hadron Collider (LHC). Grids face complex security challenges. They are interesting targets for attackers seeking for huge computational resources. Since users can execute arbitrary code in the worker nodes on the Grid sites, special care should be put in this environment. Automatic tools to harden and monitor this scenario are required. Currently, there is no integrated solution for such requirement. This paper describes a new security framework to allow execution of job payloads in a sandboxed context. It also allows process behavior monitoring to detect intrusions, even when new attack methods or zero day vulnerabilities are exploited, by a Machine Learning approach. We plan to implement the proposed framework as a software prototype that will be tested as a component of the ALICE Grid middleware.

  13. [Obligatory and facultative symptoms of the Alice in wonderland syndrome].

    PubMed

    Podoll, K; Ebel, H; Robinson, D; Nicola, U

    2002-08-01

    The Alice in Wonderland syndrome (AIWS), as described by Todd in 1955, denotes a variety of self-experienced paroxysmal body schema disturbances (obligatory core symptoms of the AIWS) which may co-occur with depersonalization, derealization, visual illusions and disorders of the time perception (facultative symptoms of the AIWS). The name comes, of course, from Lewis Carroll's 1865 novel "Alice's Adventures in Wonderland", which is believed to have been inspired by Carroll's own migraine experiences documented as early as 1856. Recent studies of the AIWS occurring as somesthetic migraine aura indicated that the body schema disturbance of macrosomatognosia most frequently affects the head and upper extremities, paralleling the extension of their representation in the human brain. As a misapprehension commonly encountered in the medical literature, it has been suggested to define the AIWS by the presence of visual rather than somesthetic perceptual disturbances, e.g. metamorphopsia and/or visual hallucinations, but this change and broadening of Todd's definition of the AIWS turns it to a both scientifically and clinically useless concept.

  14. Light flavour hadron production in the ALICE experiment at LHC

    NASA Astrophysics Data System (ADS)

    Badalà, Angela

    2016-05-01

    Unique among the LHC experiments, ALICE has excellent particle identification capabilities for the measurement of light-flavour hadrons. A large number of hadron species from pions to multi-strange baryons and light nuclei have been measured over a large transverse momentum region. The measurement of the production of these particles is a valuable tool to study the properties of the medium formed in heavy-ion collisions. In particular they give information on the collective phenomena of the fireball, on the parton energy loss in the hot QCD medium and on the hadronization mechanisms such as recombination and statistical hadronization. The measurements in pp and in p-nucleus collisions provide the necessary baseline for heavy-ion data and help to investigate the effects of the ordinary nuclear matter. In this paper some of the main ALICE results on identified light-flavour hadron production in Pb-Pb collisions at √sNN = 2.76 TeV and p-Pb collisions at √sNN = 5.02 TeV will be presented.

  15. ALFA: The new ALICE-FAIR software framework

    NASA Astrophysics Data System (ADS)

    Al-Turany, M.; Buncic, P.; Hristov, P.; Kollegger, T.; Kouzinopoulos, C.; Lebedev, A.; Lindenstruth, V.; Manafov, A.; Richter, M.; Rybalchenko, A.; Vande Vyvre, P.; Winckler, N.

    2015-12-01

    The commonalities between the ALICE and FAIR experiments and their computing requirements led to the development of large parts of a common software framework in an experiment independent way. The FairRoot project has already shown the feasibility of such an approach for the FAIR experiments and extending it beyond FAIR to experiments at other facilities[1, 2]. The ALFA framework is a joint development between ALICE Online- Offline (O2) and FairRoot teams. ALFA is designed as a flexible, elastic system, which balances reliability and ease of development with performance using multi-processing and multithreading. A message- based approach has been adopted; such an approach will support the use of the software on different hardware platforms, including heterogeneous systems. Each process in ALFA assumes limited communication and reliance on other processes. Such a design will add horizontal scaling (multiple processes) to vertical scaling provided by multiple threads to meet computing and throughput demands. ALFA does not dictate any application protocols. Potentially, any content-based processor or any source can change the application protocol. The framework supports different serialization standards for data exchange between different hardware and software languages.

  16. How beam driven operations optimize ALICE efficiency and safety

    NASA Astrophysics Data System (ADS)

    Pinazza, Ombretta; Augustinus, André; Bond, Peter M.; Chochula, Peter C.; Kurepin, Alexander N.; Lechman, Mateusz; Rosinsky, Peter

    2012-12-01

    ALICE is one of the experiments at the Large Hadron Collider (LHC), CERN (Geneva, Switzerland). The ALICE DCS is responsible for the coordination and monitoring of the various detectors and of central systems, for collecting and managing alarms, data and commands. Furthermore, it's the central tool to monitor and verify the beam status with special emphasis on safety. In particular, it is important to ensure that the experiment's detectors are brought to and stay in a safe state, e.g. reduced voltages during the injection, acceleration, and adjusting phases of the LHC beams. Thanks to its central role, it's the appropriate system to implement automatic actions that were normally left to the initiative of the shift leader; where decisions come from the knowledge of detectors’ statuses and of the beam, combined together to fulfil the scientific requirements, keeping safety as a priority in all cases. This paper shows how the central DCS is interpreting the daily operations from a beam driven point of view. A tool is being implemented where automatic actions can be set and monitored through expert panels, with a custom level of automatization. Some routine operations are already automated, when a particular beam mode is declared by the LHC, which can represent a safety concern. This beam driven approach is proving to be a tool for the shift crew to optimize the efficiency of data taking, while improving the safety of the experiment.

  17. Mediated definite delegation - Certified Grid jobs in ALICE and beyond

    NASA Astrophysics Data System (ADS)

    Schreiner, Steffen; Grigoras, Costin; Litmaath, Maarten; Betev, Latchezar; Buchmann, Johannes

    2012-12-01

    Grid computing infrastructures need to provide traceability and accounting of their users’ activity and protection against misuse and privilege escalation, where the delegation of privileges in the course of a job submission is a key concern. This work describes an improved handling of Multi-user Grid Jobs in the ALICE Grid Services. A security analysis of the ALICE Grid job model is presented with derived security objectives, followed by a discussion of existing approaches of unrestricted delegation based on X.509 proxy certificates and the Grid middleware gLExec. Unrestricted delegation has severe security consequences and limitations, most importantly allowing for identity theft and forgery of jobs and data. These limitations are discussed and formulated, both in general and with respect to an adoption in line with Multi-user Grid Jobs. A new general model of mediated definite delegation is developed, allowing a broker to dynamically process and assign Grid jobs to agents while providing strong accountability and long-term traceability. A prototype implementation allowing for fully certified Grid jobs is presented as well as a potential interaction with gLExec. The achieved improvements regarding system security, malicious job exploitation, identity protection, and accountability are emphasized, including a discussion of non-repudiation in the face of malicious Grid jobs.

  18. Geohydrology of Brooks, Lowndes, and western Echols counties, Georgia

    USGS Publications Warehouse

    Krause, R.E.

    1979-01-01

    The principal artesian aquifer, a limestone of Eocene to Miocene age, is the main source of water supply for Brooks, Lowndes, and western Echols Counties in south Georgia. Pumpage of about 22 million gallons perday from this prolific aquifer has not posed any problems regarding declining water levels or depletion of the reservoir. However, water-quality problems do occur in the Valdosta area. Seepage-run measurements indicate that the Withlacoochee River north of Valdosta contributes an average of 112 cubic feet per second of water to caverns and sinkholes that recharge the aquifer. Wells near the recharge area withdraw relatively unfiltered water with iron concentration and color intensity exceeding standards for drinking water. South of Valdosta, water from the aquifer contains as much as 3.0 milligrams per liter of hydrogen sulfide, rendering the water unfit for drinking. Water high in sulfate concentration occurs below 550 feet in the lower part of the aquifer in Valdosta, and is assumed to be present at that depth throughout the study area. Generally, sufficient quantities of freshwater can be obtained without drilling to this depth.

  19. Brooke-Spiegler Syndrome and Phenotypic Variants: An Update.

    PubMed

    Kazakov, Dmitry V

    2016-06-01

    Brooke-Spiegler syndrome (BSS) is an inherited autosomal dominant disease characterized by the development of multiple adnexal cutaneous neoplasms most commonly spiradenoma, cylindroma, spiradenocylindroma, and trichoepithelioma. Multiple familial trichoepithelioma (MFT) is a phenotypic variant of the disease characterized by the development of numerous trichoepitheliomas (cribriform trichoblastoma) only. Malignant tumors arise in association with preexisting benign cutaneous neoplasms in about 5-10% of the patients . Apart from the skin, major and minor salivary glands have been rarely involved in BSS patients. Extremely rare is the occurrence of breast tumors (cylindroma). The gene implicated in the pathogenesis of the disease is the CYLD gene, a tumor suppressor gene located on chromosome 16q12-q13. Germline CYLD mutations are detected in about 80-85% of patients with the classical BSS phenotype and in about 40-50% of the individuals with the MFT phenotype using a PCR based approach with analysis of exonic sequences and exon-intron junctions of the CYLD gene. There appears to be no genotype-phenotype correlations with respect to the severity of the disease, the possibility of malignant transformation, and development of extracutaneous lesions.

  20. Pulsed laser deposition of c-axis untilted YBCO films on c-axis tilted ISD MgO-buffered metallic substrates

    NASA Astrophysics Data System (ADS)

    Li, M.; Ma, B.; Koritala, R. E.; Fisher, B. L.; Venkataraman, K.; Maroni, V. A.; Vlasko-Vlasov, V.; Berghuis, P.; Welp, U.; Gray, K. E.; Balachandran, U.

    2003-05-01

    Biaxially textured MgO template layer was deposited on nontextured metal substrates by inclined-substrate deposition (ISD) at a deposition rate of 24-600 nm/min. c-axis untilted YBa 2Cu 3O 7- x (YBCO) films were deposited on these MgO-buffered substrates by pulsed laser deposition. The crystalline structures of the YBCO films and MgO layers were examined by X-ray pole figure analysis, X-ray φ-scans, and χ-scans. A tilt angle of 33° of the MgO[0 0 1] with respect to the substrate normal and c-axis untilted YBCO films were observed, respectively. Good biaxial texture of these films with full-width-at-half-maximum values of 13.8° and 10.6° for the φ-scans of YBCO(1 0 3) and MgO(2 2 0), respectively, were obtained. Morphologies were examined by scanning electron microscopy, which revealed a unique roof-tile feature and columnar grain growth for the ISD MgO layer. Raman spectroscopy and magneto-optical image technique were also used to evaluate the quality of the YBCO film. An angular dependence of Jc on the direction of an applied magnetic field confirmed the c-axis untilted orientation of the YBCO films. Tc=90 K with sharp transition and Jc=3.0×10 5 A/cm 2 at 77 K in zero field were obtained on 0.4-μm-thick YBCO films.

  1. Evaluation of catch-and-release regulations on Brook Trout in Pennsylvania streams

    USGS Publications Warehouse

    Jason Detar,; Kristine, David; Wagner, Tyler; Greene, Tom

    2014-01-01

    In 2004, the Pennsylvania Fish and Boat Commission implemented catch-and-release (CR) regulations on headwater stream systems to determine if eliminating angler harvest would result in an increase in the number of adult (≥100 mm) or large (≥175 mm) Brook Trout Salvelinus fontinalis. Under the CR regulations, angling was permitted on a year-round basis, no Brook Trout could be harvested at any time, and there were no tackle restrictions. A before-after–control-impact design was used to evaluate the experimental regulations. Brook Trout populations were monitored in 16 treatment (CR regulations) and 7 control streams (statewide regulations) using backpack electrofishing gear periodically for up to 15 years (from 1990 to 2003 or 2004) before the implementation of the CR regulations and over a 7–8-year period (from 2004 or 2005 to 2011) after implementation. We used Poisson mixed models to evaluate whether electrofishing catch per effort (CPE; catch/100 m2) of adult (≥100 mm) or large (≥175 mm) Brook Trout increased in treatment streams as a result of implementing CR regulations. Brook Trout CPE varied among sites and among years, and there was no significant effect (increase or decrease) of CR regulations on the CPE of adult or large Brook Trout. Results of our evaluation suggest that CR regulations were not effective at improving the CPE of adult or large Brook Trout in Pennsylvania streams. Low angler use, high voluntary catch and release, and slow growth rates in infertile headwater streams are likely the primary reasons for the lack of response.

  2. Alice in Wonderland syndrome as an initial manifestation of Epstein-Barr virus infection.

    PubMed

    Cinbis, M; Aysun, S

    1992-05-01

    We present a patient with serologically confirmed Epstein-Barr virus (EBV) infection who had illusions of size, shape, and colour of objects but none of the typical symptoms and signs peculiar to infectious mononucleosis (IM) except sore throat which developed 2 weeks after the initial visual disturbances. The bizarre feelings about the images of body and objects are called the 'Alice in Wonderland syndrome' due to the similarity with Alice's dreams. The same symptomatology including visual metamorphosia is defined in patients with migraine, epilepsy, intoxication due to hallucinogenic drugs, schizophrenia, hyperpyrexia, and cerebral lesions. Alice in Wonderland syndrome has also been reported in the course of IM. PMID:1390519

  3. Alice in Wonderland syndrome as an initial manifestation of Epstein-Barr virus infection.

    PubMed Central

    Cinbis, M; Aysun, S

    1992-01-01

    We present a patient with serologically confirmed Epstein-Barr virus (EBV) infection who had illusions of size, shape, and colour of objects but none of the typical symptoms and signs peculiar to infectious mononucleosis (IM) except sore throat which developed 2 weeks after the initial visual disturbances. The bizarre feelings about the images of body and objects are called the 'Alice in Wonderland syndrome' due to the similarity with Alice's dreams. The same symptomatology including visual metamorphosia is defined in patients with migraine, epilepsy, intoxication due to hallucinogenic drugs, schizophrenia, hyperpyrexia, and cerebral lesions. Alice in Wonderland syndrome has also been reported in the course of IM. PMID:1390519

  4. DDL, the ALICE data transmission protocol and its evolution from 2 to 6 Gb/s

    NASA Astrophysics Data System (ADS)

    Carena, F.; Carena, W.; Chibante Barroso, V.; Costa, F.; Chapeland, S.; Delort, C.; Dénes, E.; Divià, R.; Fuchs, U.; Grigore, A.; Ionita, C.; Kiss, T.; Simonetti, G.; Soós, C.; Telesca, A.; Vande Vyvre, P.; Von Haller, B.

    2015-04-01

    ALICE (A Large Ion Collider Experiment) is the detector system at the LHC (Large Hadron Collider) that studies the behaviour of strongly interacting matter and the quark gluon plasma. The information sent by the sub-detectors composing ALICE are read out by DATE (Data Acquisition and Test Environment), the ALICE data acquisition software, using hundreds of multi-mode optical links called DDL (Detector Data Link). To cope with the higher luminosity of the LHC, the bandwidth of the DDL links will be upgraded in 2015. This paper will describe the evolution of the DDL protocol from 2 to 6 Gbit/s.

  5. [Alice's adventures in the wonderland of knowledge: the path to current literacy].

    PubMed

    Sanz-Valero, Javier; Castiel, Luis David; Wanden-Berghe, Carmina

    2010-03-01

    Alice wants to study with amusing books filled with colorful drawings. "Alice's adventures in Wonderland" serves as excuse to introduce and discuss the current importance of digital literacy and how communication and information technologies have changed the way of transmitting and disseminating knowledge. Considering as a corollary, Alice today would have access to a multitude of beautiful multimedia documents, of greater or lesser quality, available through multiple paths. However, given her incipient education, knowing their true worth and aptitude is a privilege she has yet to obtain. This is her challenge! PMID:21461500

  6. Cement stratigraphy of the Lisburne Group, northeastern Brooks Range, Alaska

    SciTech Connect

    Carlson, R.C.; Goldstein, R.H. . Geology Dept.)

    1992-01-01

    Cement stratigraphy serves as a descriptive framework for the interpretation of the diagenetic history of the Carboniferous Lisburne Group, northeastern Brooks Range, Alaska. The Lisburne is a sequence of shallow-water, marine carbonate rocks that have experienced a wide spectrum of diagenetic events: early marine diagenesis, early subaerial exposure, significant erosion and karstification following final Lisburne deposition, deep burial of at least 3,000 meters, compressional tectonism, and final uplift into modern mountain ranges. Compositional zones in the calcite cements were identified by using stains for ferroan calcite and cathodoluminescence microscopy. The cements are, from oldest to youngest: A1-nonferroan, nonluminescent or multibanded calcite; B1-nonferroan to low-ferroan, dull luminescent calcite; C1-ferroan, very-dull luminescent calcite; B2-nonferroan, dull luminescent calcite; A2-nonferroan calcite with 1 or 2 sets of nonluminescent and bright zones; C2-ferroan, very-dull luminescent calcite; Be-nonferroan, dull luminescent calcite. Petrographic studies of cross-cutting relationships show that A1 cements predate or are synchronous with surfaces of subaerial exposure within the Lisburne Group. The cross-cutting relationships include truncation of cements by early fractures, non-marine fissure fills, and at clast margins of autoclastic breccias. Similarly, B1 and C1 cements predate the major unconformity at the top of the Lisburne Group, hence, these cements are pre-Permian in age and may well have precipitated from fresh groundwaters introduced during development of the sub-Permian unconformity. B2 and C2 cements are present in the Permian Echooka formation overlying the Lisburne Group and, thus, can be dated as post-Pennsylvanian. B3 cements are Cretaceous or younger in age.

  7. Spring and aufeis (icing) hydrology in Brooks Range, Alaska

    NASA Astrophysics Data System (ADS)

    Yoshikawa, Kenji; Hinzman, Larry D.; Kane, Douglas L.

    2007-12-01

    Remote sensing studies and field hydrometeorological and geophysical investigations were employed to characterize several aufeis fields in the Brooks Range, Alaska. Geochemical studies were undertaken together with field hydrological measurements to better understand the chemical and thermal properties of stream base flow (groundwater spring) that contributes to winter aufeis development. The spring water temperature was measured at several major aufeis fields using data loggers throughout the year. Aufeis is an important water storage component in the Arctic and influences local ecology and geomorphology. Synthetic aperture radar (SAR) is a useful and sensitive sensor for aufeis detection and for estimating the total volume of storage as well as freeze/thaw conditions. The SAR analysis indicated that the volume of aufeis formed in winter is 27-30% of the annual groundwater discharge in the Kuparuk River. Visible and near-IR satellite imagery indicated many of the high-discharge springs (more than 10-1000 1/s) and aufeis fields are centered around an elevation of 600 m a.s.l. in limestone areas with glacial morphology. Geomorphological investigations indicate that many of springs have continually existed from at least the last glaciation. Microwave data (SAR), thermal infrared, short wave infrared, and visible and near-IR bands were all used to observe the growth, decay, and distribution of aufeis deposits. The remotely sensed data indicate that the distribution of the aufeis deposits today is nearly the same as it was in past colder periods; this was mainly determined by mapping the distributed carbonate precipitates. Also, spring water temperatures and discharge volumes are predictable from the aufeis field size using remotely sensed techniques.

  8. Diagenesis of the Lisburne Group, northeastern Brooks Range, Alaska

    SciTech Connect

    Carlson, R.C.; Goldstein, R.H.; Enos, P.

    1995-05-01

    Petrographic cathodoluminescence studies of the cement stratigraphy of the Lisburne Group yield insights on its diagenetic history. Crosscutting relationships between features of subaerial exposure and calcite cements show that early generations of nonferroan, nonluminescent and multibanded-luminescent calcites are synchronous with or postdated by subaerial exposure surfaces within the Lisburne. Surfaces of subaerial exposure occur at 18 horizons within the Lisburne and are distinguished by features as laminated crusts, rhizoliths, autoclastic breccia, fissure fills, mud cracks, and erosional surfaces. Crosscutting relationships also occur between calcite cements and clasts in karst breccias and conglomerates that formed along the sub-Permian unconformity at the top of the Lisburne. The sub-Permian unconformity postdates later generations of calcite cement. These cements formed in the following sequence: nonferroan to low-ferroan, dully luminescent calcite; ferroan, very-dully luminescent calcite; and second generation of nonferroan, multibanded calcite. The crosscutting relationships not only constrain the timing of cement precipitation, but also suggest that the cements probably were precipitated from meteoric groundwaters introduced during subaerial exposure of the Lisburne platform. Late cements in the Lisburne postdate the Permian Echooka Formation. These cements are low-ferroan, moderately-bright to dully luminescent calcite, followed by a second generation of ferroan, very-dully luminescent calcite. Features of compaction and pressure solution are coincident with the precipitation of the late ferroan calcite and further constrain its timing to deep burial of the Lisburne. The youngest phase of calcite cement precipitated in the Lisburne Group is nonferroan, very-dully luminescent calcite. It commonly fills tectonically-induced shear fractures, indicating precipitation after the onset of Cretaceous (and/or Cenozoic) tectonism in the northeastern Brooks Range.

  9. Structural problems of the Brooks Range ophiolite, Alaska

    SciTech Connect

    Harris, R.A.; Bickerstaff, D. . Dept. of Geology); Stone, D.B. . Geophysical Inst.)

    1993-04-01

    Structural and paleogeographic restorations of the Brooks Range ophiolite (hereafter BRO) and other associated mafic and ultramafic bodies of N. Alaska are difficult because of ambiguous relations between sheeted dikes, cover sediments, and steep NW and SE dipping magmatic flow fabrics. Paleomagnetically enhanced structural studies at Misheguk, Avan, and Siniktanneyak Mountains provide new constraints for the initial dip and sequence of deformation for various structural features of the BRO. The angle between magmatic layers near the petrologic moho and the paleomagnetic inclination of these layers is 50--63[degree] at Misheguk. High level gabbro layers that are disrupted by syn- and post-cooling intrusions display a greater variation. Assuming that the characteristic magnetization is primary, and that the primary inclination was > 80[degree], magmatic layers and the moho had initial dips from 17--40[degree]. These layers now dip 40--70[degree]SE suggesting some post-magmatic tilt. The variation of inclinations with depth in the ophiolite suggest that high level gabbro has tilted most. Sheeted dikes are documented at the Maiyumerak and Siniktanneyak ophiolite bodies. At both locations the dikes dip steeply and strike NE-SW. Sedimentary and volcanic flow layers associated with the dikes have the same strike and dip 0--30[degree]. Parallelism between various planar features throughout the BRO indicates that rotations about a vertical axis are either uniform throughout the ophiolite belt or negligible. Assuming the later, the BRO may represent a linear zone of SSZ magmatism that was oriented NE-SW prior to collision. Post-emplacement long wavelength folding of the ophiolite lid can account for its variation in facing direction and some steepening of magmatic layers.

  10. Tectonic evolution of the Brooks Range ophiolite, Alaska

    SciTech Connect

    Harris, R.A. . Dept. of Geology)

    1993-04-01

    Detailed studies of the composition, internal structure, and age of the Brooks Range ophiolite (BRO) and its metamorphic sole reveal new constraints for its tectonic evolution. The BRO consists of six separate thrust masses of consanguineous composition, internal organization, structure and age. Subophiolite metamorphic rocks are locally preserved along its structural base, which is well exposed in several places. The metamorphic sole is locally transitional with mafic volcanic sequences, chert, tuffs, and minor clastic sedimentary material of the Copter Peak Complex, which is correlative with the Angayucham terrane. This terrane is much older than, and chemically distinct from the BRO. The internal structure of the BRO is characterized by NE-SW trending igneous layers that expose the transition zone from crust to mantle. Residual mantle material consists of tectonized peridotite in abrupt contact with dunite pods up to 4 km thick. Ductile and brittle structures of the BRO preserve various phases of its dynamic evolution from a magma body to a fragmented thrust sheet. The earliest deformational effects are recorded by ductile lattice and shape fabrics in dunites and the layered series of the BRO. Magmatic flow planes generally parallel the petrologic moho, and dip 40[degree]--70[degree] to the NW and SE. Flow lineations consistently plunge ESE-ENE from 39[degree]--54[degree]. Igneous laminations and compositional layers represent patterns of magmatic flow in, and plastic deformation of, a cumulate sequence -- not the deposition pattern of cumulate layers. In the upper layered series, amphiboles with a shape-preferred orientation yield Ar/Ar plateau ages of 163--169 Ma. These ages overlap with plateau ages of the same kind from amphibolite of the metamorphic sole. This concordance in age indicates that cooling of the BRO coincided with its tectonic emplacement.

  11. HPLC and ELISA analyses of larval bile acids from Pacific and western brook lampreys

    USGS Publications Warehouse

    Yun, S.-S.; Scott, A.P.; Bayer, J.M.; Seelye, J.G.; Close, D.A.; Li, W.

    2003-01-01

    Comparative studies were performed on two native lamprey species, Pacific lamprey (Lampetra tridentata) and western brook lamprey (Lampetra richardsoni) from the Pacific coast along with sea lamprey (Petromyzon marinus) from the Great Lakes, to investigate their bile acid production and release. HPLC and ELISA analyses of the gall bladders and liver extract revealed that the major bile acid compound from Pacific and western brook larval lampreys was petromyzonol sulfate (PZS), previously identified as a migratory pheromone in larval sea lamprey. An ELISA for PZS has been developed in a working range of 20pg-10ng per well. The tissue concentrations of PZS in gall bladder were 127.40, 145.86, and 276.96??g/g body mass in sea lamprey, Pacific lamprey, and western brook lamprey, respectively. Releasing rates for PZS in the three species were measured using ELISA to find that western brook and sea lamprey released PZS 20 times higher than Pacific lamprey did. Further studies are required to determine whether PZS is a chemical cue in Pacific and western brook lampreys. ?? 2003 Elsevier Inc. All rights reserved.

  12. Conservation genetics of Lake Superior brook trout: Issues, questions, and directions

    USGS Publications Warehouse

    Wilson, C.C.; Stott, W.; Miller, L.; D'Amelio, S.; Jennings, Martin J.; Cooper, A.M.

    2008-01-01

    Parallel efforts by several genetic research groups have tackled common themes relating to management concerns about and recent rehabilitation opportunities for coaster brook trout Salvelinus fontinalis in Lake Superior. The questions that have been addressed include the evolutionary and genetic status of coaster brook trout, the degree of relatedness among coaster populations and their relationship to riverine tributary brook trout populations, and the role and effectiveness of stocking in maintaining and restoring coasters to Lake Superior. Congruent genetic results indicate that coasters are an ecotype (life history variant) rather than an evolutionarily significant unit or genetically distinct strain. Regional structure exists among brook trout stocks, coasters being produced from local populations. Introgression of hatchery genes into wild populations appears to vary regionally and may relate to local population size, habitat integrity, and anthropogenic pressures. Tracking the genetic diversity and integrity associated with captive breeding programs is helping to ensure that the fish used for stocking are representative of their source populations and appropriate for rehabilitation efforts. Comparative analysis of shared samples among collaborating laboratories is enabling standardization of genotype scoring and interpretation as well as the development of a common toolkit for assessing genetic structure and diversity. Incorporation of genetic data into rehabilitation projects will facilitate monitoring efforts and subsequent adaptive management. Together, these multifaceted efforts provide comprehensive insights into the biology of coaster brook trout and enhance restoration options. ?? Copyright by the American Fisheries Society 2008.

  13. Dietary calcein marking of brook trout, Atlantic salmon, yellow perch, and coho salmon scales

    USGS Publications Warehouse

    Honeyfield, D.C.; Ostrowski, C.S.; Fletcher, J.W.; Mohler, J.W.

    2006-01-01

    Brook trout Salvelinus fontinalis, Atlantic salmon Salmo salar, coho salmon Oncorhynchus kisutch, and yellow perch Perca flavescens fed calcein for 5 d showed characteristic calcein scale marks 7-10 d postmarking. In fish fed 0.75 or 1.25 g of calcein per kilogram of feed, the percentage of fish that exhibited a calcein mark was 100% in brook trout, 93-98% in Atlantic salmon, 60% in yellow perch, and 0% in coho salmon. However, when coho salmon were fed 5.25 g calcein/kg feed, 100% marking was observed 7-10 d postmarking. Brook trout were successfully marked twice with distinct bands when fed calcein 5 months apart. Brook trout scale pixel luminosity increased as dietary calcein increased in experiment 2. For the second calcein mark, scale pixel luminosity from brook trout fed 1.25 g calcein/kg feed was numerically higher (P < 0.08) than scales from fish fed 0.75 g calcein/kg feed. Mean pixel luminosity of calcein-marked Atlantic salmon scales was 57.7 for fish fed 0.75 g calcein/kg feed and 55.2 for fish fed 1.25 g calcein/kg feed. Although feed acceptance presented a problem in yellow perch, these experiments provide evidence that dietary calcein is a viable tool for marking fish for stock identification. ?? Copyright by the American Fisheries Society 2006.

  14. Science in Flux: NASA's Nuclear Program at Plum Brook Station 1955-2005

    NASA Technical Reports Server (NTRS)

    Bowles, Mark D.

    2006-01-01

    Science in Flux traces the history of one of the most powerful nuclear test reactors in the United States and the only nuclear facility ever built by NASA. In the late 1950's NASA constructed Plum Brook Station on a vast tract of undeveloped land near Sandusky, Ohio. Once fully operational in 1963, it supported basic research for NASA's nuclear rocket program (NERVA). Plum Brook represents a significant, if largely forgotten, story of nuclear research, political change, and the professional culture of the scientists and engineers who devoted their lives to construct and operate the facility. In 1973, after only a decade of research, the government shut Plum Brook down before many of its experiments could be completed. Even the valiant attempt to redefine the reactor as an environmental analysis tool failed, and the facility went silent. The reactors lay in costly, but quiet standby for nearly a quarter-century before the Nuclear Regulatory Commission decided to decommission the reactors and clean up the site. The history of Plum Brook reveals the perils and potentials of that nuclear technology. As NASA, Congress, and space enthusiasts all begin looking once again at the nuclear option for sending humans to Mars, the echoes of Plum Brook's past will resonate with current policy and space initiatives.

  15. Upgrade of the ALICE TPC FEE online radiation monitoring system

    NASA Astrophysics Data System (ADS)

    RØed, K.; Alme, J.; Askeland, E.; David, E.; Gunji, T.; Helstrup, H.; Kiss, T.; Lippmann, C.; Rehman, A.; Röhrich, D.; Ullaland, K.; Velure, A.; Zhao, C.

    2015-12-01

    This paper presents the radiation monitoring system on the Readout Control Unit (RCU) of the the ALICE TPC Front End Electronics. In Run 1, Single Event Upsets (SEUs) in the configuration memory of an SRAM based FPGA were counted, and the results from different run periods with stable beam conditions are presented. For Run 2, a new RCU, the RCU2, has been designed in order to achieve higher data readout rates and increase radiation tolerance. The RCU2 also includes a new radiation monitor solution with increased sensitivity, which is based on counting the number of SEUs in dedicated SRAM memories. The paper presents this new solution together with the results from the targeted irradiation campaigns.

  16. Cerebral perfusion in children with Alice in Wonderland syndrome.

    PubMed

    Kuo, Y T; Chiu, N C; Shen, E Y; Ho, C S; Wu, M C

    1998-08-01

    Alice in Wonderland syndrome (AIWS) is characterized by visual hallucinations and bizarre perceptual distortions. Technetium-99m hexamethylpropyleneamine tomography (SPECT) brain scans were performed in four patients during the acute stage of AIWS. Two patients were demonstrated to have Epstein-Barr virus infections. One had abnormal (EEG) findings. The visual-evoked potential, cranial CT, and MRI findings were negative. The decreased cerebral perfusion areas in all patients were near the visual tract and visual cortex. All involved some regions of the temporal lobe. In most patients with AIWS, the EEG, CT, and MRI are unable to determine the precise pathologic areas. However, a SPECT brain scan may demonstrate abnormal perfusion areas and explain the clinical presentations. PMID:9744628

  17. The Laser of the ALICE Time Projection Chamber

    NASA Astrophysics Data System (ADS)

    Renault, G.; Nielsen, B. S.; Westergaard, J.; Gaardhøje, J. J.

    The large TPC (95 m3) of the ALICE detector at the CERN LHC was commissioned in summer 2006. The first tracks were observed both from the cosmic ray muons and from the laser rays injected into the TPC. In this article the basic principles of operating the 266 nm lasers are presented, showing the installation and adjustment of the optical system and describing the control system. To generate the laser tracks, a wide laser beam is split into several hundred narrow beams by fixed micro-mirrors at stable and known positions throughout the TPC. In the drift volume, these narrow beams generate straight tracks at many angles. Here we describe the generation of the first tracks and compare them with simulations.

  18. Performance simulation studies for the ALICE TPC GEM upgrade

    NASA Astrophysics Data System (ADS)

    Ljunggren, M.

    2016-07-01

    To be able to exploit the anticipated interaction rate of 50 kHz in Pb-Pb collisions during run 3 of the LHC (beyond 2019), the ALICE TPC will be upgraded to allow continuous readout. As this is not possible with the current Multi Wire Proportional Chamber (MWPC) based amplification, the readout will be replaced with Gas Electron Multiplier (GEM) readout chambers that can suppress ~ 99% of the ion back flow. The space charge of the remaining 1% ion back flow, however, will cause significant distortions to the measured tracks of order cm. Simulation studies to characterize the distortions and test correction strategies have been performed, which show that the intrinsic momentum resolution, without these distortions, can be recovered.

  19. An overview of resonance measurements at the ALICE experiment

    NASA Astrophysics Data System (ADS)

    Knospe, A. G.

    2016-05-01

    Resonances play a unique role in the study of ultra-relativistic heavy-ion collisions. Resonance yields, which may be modified by rescattering and regeneration after hadronization, can be used to study the properties of the hadronic phase of the collision. The transversemomentum spectra of the proton and the ϕ(1020) can be used to study the mechanisms of particle production. In addition, resonance measurements in pp and p-Pb collisions help to distinguish initial-state effects from the effects of the hot and dense final state. The ALICE Collaboration has studied the K*(892)0 and ϕ(1020) mesons in pp, p-Pb, and Pb-Pb collisions. Measurements of many resonance properties, including pT spectra, integrated yields, masses, widths, mean pT values, and the nuclear modification factors RAA and RpPb, are presented and compared to measurements from other experiments, non-resonances, and the predictions of theoretical models.

  20. Archival Legacy Investigation of Circumstellar Environments (ALICE). Survey results

    NASA Astrophysics Data System (ADS)

    Soummer, Remi; Choquet, Elodie; Pueyo, Laurent; Brendan Hagan, J.; Gofas-Salas, Elena; Rajan, Abhijith; Chen, Christine; Perrin, Marshall D.; Debes, John H.; Golimowski, David A.; Hines, Dean C.; N'Diaye, Mamadou; Schneider, Glenn; Mawet, Dimitri; Marois, Christian

    2016-01-01

    We report on the status of the ALICE project (Archival Legacy Investigation of Circumstellar Environments. HST/AR-12652), which consists in a consistent reanalysis of the entire HST-NICMOS coronagraphic archive with advanced post-processing techniques. Over the last two years, we have developed a sophisticated pipeline able to handle the data of the 400 stars of the archive. We present the results of the overall reduction campaign and discuss the first statistical analysis of the candidate detections. As we will deliver high-level science products to the STScI MAST archive, we are defining a new standard format for high-contrast science products, which will be compatible with every new high-contrast imaging instrument and used by the JWST coronagraphs. We present here an update and overview of the specifications of this standard.

  1. Pluto's Extended Atmosphere: New Horizons Alice Lyman-α Imaging

    NASA Astrophysics Data System (ADS)

    Retherford, Kurt D.; Gladstone, G. Randall; Stern, S. Alan; Weaver, Harold A.; Young, Leslie A.; Ennico, Kimberly A.; Olkin, Cathy B.; Cheng, Andy F.; Greathouse, Thomas K.; Hinson, David P.; Kammer, Joshua A.; Linscott, Ivan R.; Parker, Alex H.; Parker, Joel Wm.; Pryor, Wayne R.; Schindhelm, Eric; Singer, Kelsi N.; Steffl, Andrew J.; Strobel, Darrell F.; Summers, Michael E.; Tsang, Constantine C. C.; Tyler, G. Len; Versteeg, Maarten H.; Woods, William W.; Cunningham, Nathaniel J.; Curdt, Werner

    2015-11-01

    Pluto's upper atmosphere is expected to extend several planetary radii, proportionally more so than for any planet in our solar system. Atomic hydrogen is readily produced at lower altitudes due to photolysis of methane and transported upward to become an important constituent. The Interplanetary Medium (IPM) provides a natural light source with which to study Pluto's atomic hydrogen atmosphere. While direct solar Lyman-α emissions dominate the signal at 121.6 nm at classical solar system distances, the contribution of diffuse illumination by IPM Lyman-α sky-glow is roughly on par at Pluto (Gladstone et al., Icarus, 2015). Hydrogen atoms in Pluto's upper atmosphere scatter these bright Lyα emission lines, and detailed simulations of the radiative transfer for these photons indicate that Pluto would appear dark against the IPM Lyα background. The Pluto-Alice UV imaging spectrograph on New Horizons conducted several observations of Pluto during the encounter to search for airglow emissions, characterize its UV reflectance spectra, and to measure the radial distribution of IPM Lyα near the disk. Our early results suggest that these model predictions for the darkening of IPM Lyα with decreasing altitude being measureable by Pluto-Alice were correct. We'll report our progress toward extracting H and CH4 density profiles in Pluto's upper atmosphere through comparisons of these data with detailed radiative transfer modeling. These New Horizons findings will have important implications for determining the extent of Pluto's atmosphere and related constraints to high-altitude vertical temperature structure and atmospheric escape.This work was supported by NASA's New Horizons project.

  2. Open heavy-flavor measurements with ALICE at the LHC

    NASA Astrophysics Data System (ADS)

    Bailhache, R.

    2016-01-01

    ALICE is well equipped to reconstruct heavy-flavor particles down to low transverse momentum pT at mid and forward rapidity. An overview of the ALICE results obtained with the Run 1 data in pp (√5=2.76TeV and √s=7TeV), Pb-Pb (√Snn=2.76TeV) and p-Pb (√sNN=5.02 TeV) collisions is presented. In pp collisions the measured cross sections are well described by pQCD calculations. The charged-particle multiplicity dependence of heavy-flavor yields indicates that Multi-Parton Interactions contribute to the high-multiplicity pp collisions and affect charm and beauty production in a similar way. In p-Pb and Pb-Pb collisions the measured nuclear modification factors indicate a final-state energy loss of heavy- quarks in central Pb-Pb collisions. Furthermore, the observed positive heavy-flavor elliptic flow in semi-central Pb-Pb collisions gives a hint that charm quarks participate in the collective expansion of the medium at low pT. In high-multiplicity p-Pb collisions, a double-ridge structure is observed in the heavy-flavor decay electron-hadron azimuthal correlations at low pT similar to what is measured in the light-flavor sector. Such long-range correlations in ŋ could originate from a collective expansion of the system, as well as from gluon saturation in the initial state (color-glass condensate) or other mechanisms.

  3. Epidemic of stab injuries: an Alice Springs dilemma.

    PubMed

    Jacob, Abraham O; Boseto, Fred; Ollapallil, Jacob

    2007-08-01

    This study is unique in that it strives to unfold, perhaps for the first time, the problem of stab injuries and resultant significant mortality and morbidity within the Aboriginal population of Central Australia. Demographic features presented in the study are quite different from other published Australasian and overseas experiences. There were 1550 stab injury admissions to Alice Springs Hospital during a 7-year period (July 1998 to June 2005). Thirty-two patients were dead before arrival, and there were only three deaths in the hospital during the period of study. The most unique demographic feature was that 99.99% were Aborigines, 53% were women and the most common location of injury was in town camps and homes. The mean age of this population was 31 years, and the average length of stay in hospital was 3 days. The most common site of the stab injuries was the thigh with a total of 605 (38%). Stab injuries to the abdomen were significantly low with 68 (<1%). Twenty-one per cent (332) presented 24 h to 10 days after stabbing. Another 21% (335) absconded before the completion of treatment. Of the victims, 31% (481) were under the influence of alcohol. Twenty per cent (311) of the patients presented with repeat stabbings during the study period. Traditional punishment is still practised in Central Australia and thus explains the high number of thigh injuries. A particular pattern of traditional stab injuries was also noted; medial thigh to kill, posterior thigh to permanently disable and lateral thigh to punish. Rampant alcoholism and social and family breakdown are thought to be significant contributors to the high incidence of violence in Alice Springs. There were only five firearm traumas during this period, two were self-inflicted and three were accidental. PMID:17635272

  4. Alice Walker: "The Diary of an African Nun" and Dubois Double Consciousness

    ERIC Educational Resources Information Center

    Fontenot, Chester J.

    1977-01-01

    Analyzes Alice Walker's novel and notes that the plight of the African nun is that of the black intellectual or middle-class who find themselves caught between two worlds which are at once complementary and contradictory. (Author)

  5. Readout upgrade, hardware and software, for the ALICE Data Acquisition program

    NASA Astrophysics Data System (ADS)

    Costa, F.; Chapeland, S.; Denes, E.; Frauman, M.; Soós, C.; Carena, F.; Carena, W.; Chibante Barroso, V.; Diviá, R.; Fuchs, U.; Makhlyueva, I.; Roukoutakis, F.; Schossmaier, K.; Telesca, A.; Rodriguez Navarro, D.; Vande Vyvre, P.; von Haller, B.; Alice Collaboration

    2010-05-01

    ALICE [experiment web site, May 10, 2009 ] (A Large Ion Collider Experiment) is an experiment at the LHC (Large Hadron Collider) optimized for the study of heavy-ion collisions. The main aim of the experiment is to study the behavior of strongly interaction matter and quark gluon plasma. The ALICE DAQ (Data Acquisition) system has been deployed and used intensively during the commissioning of the experiment. This paper will present the evolution of one particular area of the system: the detector readout. The data produced by each detector are received by DATE [ALICE data acquisition web site, May 10, 2009 ] (ALICE Data Acquisition program) using PCI (Peripheral Component Interconnect) based card called D-RORC [web site, May 10, 2009 alice-proj-ddl.web.cern.ch/alice-proj-ddl/rorc_intro.html>] (DAQ Readout Receiver Card). Of the order of 400 of these cards are installed in the PCs of the DAQ farm, and they are connected by optical links called DDL [web site, May 10, 2009 alice-proj-ddl.web.cern.ch/alice-proj-ddl/ddl_intro.html>] (Detector Data Link) to the detector readout electronics. The D-RORC is controlled by the readout software, part of the DATE program that reads the events coming from these cards. We will present the results obtained during the performance tests of the new release of the D-RORC, PCI Express, in development at CERN. The paper will review the working principles of the D-RORC, its use by the readout software and the benefits in using PCI Express instead PCI-X. It will also introduce the work in progress for the new release of the readout software towards the next hardware platform based on 64-bit computer architecture and DDLs based on 10G Ethernet.

  6. Diffractive Physics with ALICE at the LHC: the control of quantum collisions

    NASA Astrophysics Data System (ADS)

    Herrera Corral, G.

    2015-06-01

    We report on the status of the construction and installation of a new detector in the forward region of the ALICE experiment at the LHC. This detector will allow the study of processes with gaps at larger rapidity than those presently covered. A setup of two stations called AD (stands for ALICE Diffractive) on the right and on the left of the interaction point enhances significantly the efficiency to study diffractive physics and photon induced processes.

  7. Complete mitochondrial genomes of paired species northern brook lamprey (Ichthyomyzon fossor) and silver lamprey (I. unicuspis).

    PubMed

    Ren, Jianfeng; Buchinger, Tyler; Pu, Jiafei; Jia, Liang; Li, Weiming

    2016-05-01

    The complete mitogenomes of paired species northern brook lamprey (Ichthyomyzon fossor) and silver lamprey (I. unicuspis) is reported. The two mitogenomes show a 13 bp length difference on the tRNA-Gly and two control regions. The gene order and contents are conserved in the two lampreys and identical to the lamprey mitogenomes published. Except for three indel polymorphic sites, there are 27 SNP sites which are all synonymous substitution sites and occurred on 9 protein-coding genes, two rRNAs and one tRNA. The control region1 contains six consecutive 39-nt repetitive strings in both lampreys. A 7-nt repetitive string in the control region2 is repeated 3 and 5 times in northern brook lamprey and silver lamprey, respectively. The observed level of similarity between nucleotide sequences (99.74%) is consistent with the hypothesis that northern brook lamprey and silver lamprey represent two ecotypes of one species.

  8. Geomorphic, flood, and groundwater-flow characteristics of Bayfield Peninsula streams, Wisconsin, and implications for brook-trout habitat

    USGS Publications Warehouse

    Fitzpatrick, Faith A.; Peppler, Marie C.; Saad, David A.; Pratt, Dennis M.; Lenz, Bernard N.

    2015-01-01

    Available brook-trout habitat is dependent on the locations of groundwater upwellings, the sizes of flood peaks, and sediment loads. Management practices that focus on reducing or slowing runoff from upland areas and increasing channel roughness have potential to reduce flood peaks, erosion, and sedimentation and improve brook-trout habitat in all Bayfield Peninsula streams.

  9. 77 FR 37707 - Draft Environmental Impact Statement on Brooks River Visitor Access for Katmai National Park and...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-06-22

    ... document evaluates the environmental impacts of four action alternatives that include bridge and boardwalk systems to replace the existing Brooks River floating bridge and sites to relocate the existing Naknek... implemented, this EIS would amend the access provisions of the 1996 Brooks River Area Final...

  10. Effect of brook trout removal from a spawning stream on an adfluvial population of Lahontan cutthroat trout

    USGS Publications Warehouse

    Scoppettone, G. Gary; Rissler, Peter H.; Shea, Sean P.; Somer, William

    2012-01-01

    Independence Lake (Nevada and Sierra counties, California) harbors the only extant native population of Lahontan cutthroat trout Oncorhynchus clarkii henshawi in the Truckee River system and one of two extant adfluvial populations in the Lahontan basin. The persistence of this population has been precarious for more than 50 years, with spawning runs consisting of only 30–150 fish. It is assumed that this population was much larger prior to the introduction of nonnative brook trout Salvelinus fontinalis. Brook trout overlap with cutthroat trout in upper Independence Creek, where the cutthroat trout spawn and their resulting progeny emigrate to Independence Lake. In 2005, we began removing brook trout from upper Independence Creek using electrofishers and monitored the cutthroat trout population. Stomach analysis of captured brook trout revealed cutthroat trout fry, and cutthroat trout fry survival increased significantly from 4% to 12% with brook trout removal. Prior to brook trout removal, the only Lahontan cutthroat trout progeny emigrating to Independence Lake were fry; with brook trout removal, juveniles were found entering the lake. In 2010, 237 potential spawners passed a prefabricated weir upstream of Independence Lake. Although the results of this study suggest that brook trout removal from upper Independence Creek has had a positive influence on the population dynamics of Independence Lake Lahontan cutthroat trout, additional years of removal are needed to assess the ultimate effect this action will have upon the cutthroat trout population.

  11. Shale Gas Development and Brook Trout: Scaling Best Management Practices to Anticipate Cumulative Effects

    USGS Publications Warehouse

    Smith, David; Snyder, Craig D.; Hitt, Nathaniel P.; Young, John A.; Faulkner, Stephen P.

    2012-01-01

    Shale gas development may involve trade-offs between energy development and benefits provided by natural ecosystems. However, current best management practices (BMPs) focus on mitigating localized ecological degradation. We review evidence for cumulative effects of natural gas development on brook trout (Salvelinus fontinalis) and conclude that BMPs should account for potential watershed-scale effects in addition to localized influences. The challenge is to develop BMPs in the face of uncertainty in the predicted response of brook trout to landscape-scale disturbance caused by gas extraction. We propose a decision-analysis approach to formulating BMPs in the specific case of relatively undisturbed watersheds where there is consensus to maintain brook trout populations during gas development. The decision analysis was informed by existing empirical models that describe brook trout occupancy responses to landscape disturbance and set bounds on the uncertainty in the predicted responses to shale gas development. The decision analysis showed that a high efficiency of gas development (e.g., 1 well pad per square mile and 7 acres per pad) was critical to achieving a win-win solution characterized by maintaining brook trout and maximizing extraction of available gas. This finding was invariant to uncertainty in predicted response of brook trout to watershed-level disturbance. However, as the efficiency of gas development decreased, the optimal BMP depended on the predicted response, and there was considerable potential value in discriminating among predictive models through adaptive management or research. The proposed decision-analysis framework provides an opportunity to anticipate the cumulative effects of shale gas development, account for uncertainty, and inform management decisions at the appropriate spatial scales.

  12. William Keith Brooks and the naturalist's defense of Darwinism in the late-nineteenth century.

    PubMed

    Nash, Richard

    2015-06-01

    William Keith Brooks was an American zoologist at Johns Hopkins University from 1876 until his death in 1908. Over the course of his career, Brooks staunchly defended Darwinism, arguing for the centrality of natural selection in evolutionary theory at a time when alternative theories, such as neo-Lamarckism, grew prominent in American biology. In his book The Law of Heredity (1883), Brooks addressed problems raised by Darwin's theory of pangenesis. In modifying and developing Darwin's pangenesis, Brooks proposed a new theory of heredity that sought to avoid the pitfalls of Darwin's hypothesis. In so doing he strengthened Darwin's theory of natural selection by undermining arguments for the inheritance of acquired characteristics. In later attacks on neo-Lamarckism, Brooks consistently defended Darwin's theory of natural selection on logical grounds, continued to challenge the idea of the inheritance of acquired characteristics, and argued that natural selection best explained a wide range of adaptations. Finally, he critiqued Galton's statistical view of heredity and argued that Galton had resurrected an outmoded typological concept of species, one which Darwin and other naturalists had shown to be incorrect. Brooks's ideas resemble the "biological species concept" of the twentieth century, as developed by evolutionary biologist Ernst Mayr and others. The late-nineteenth century was not a period of total "eclipse" of Darwinism, as biologists and historians have hitherto seen it. Although the "Modern Synthesis" refers to the reconciliation of post-Mendelian genetics with evolution by natural selection, we might adjust our understanding of how the synthesis developed by seeing it as the culmination of a longer discussion that extends back to the late-nineteenth century.

  13. Monitoring the restoration of Red Brook, a small coastal stream in southeastern Massachusetts

    NASA Astrophysics Data System (ADS)

    Douglas, E. M.; Kichefski, S. L.; Fradkin, B.; Gontz, A. M.; Lambert, B. C.; Purinton, T. A.

    2008-12-01

    Massachusetts is putting considerable time and investment into improving regional watersheds for public safety, community use, and ecological integrity. One major aspect of this effort involves restoring rivers and streams by removing unsafe or obsolete dams and obstructions to reconnect natural and cultural river communities. Despite the importance of sediment concentrations in water quality, little has been done in Massachusetts or elsewhere to document the long term impacts of dam removal on sediment transport and its ultimate impact on the local watershed. We are monitoring the restoration of Red Brook, a 4.5 mile small, spring-fed, coastal stream which is currently on the priority projects list of the Massachusetts Riverways Program. The long-term goal of the Red Brook Restoration project is to naturalize the stream and restore its function by removing man-made flumes, eliminating sources of unnatural sedimentation, and enhancing habitat for anadromous fishes, specifically sea-run brook trout. We are using in-situ measurements, geophysical techniques and a remotely-accessed environmental sensor network to monitor flow and sediment movement in the Brook before and after the flume removal. In summer 2008, we quantified the sediment deposits that have built up behind several flumes in the Brook. Removal of the most upstream flume is currently underway and we will monitor changes in flow and sediment transport in response to this removal. Preliminary results will be presented that compare pre- and post-restoration conditions in the Brook as well as evaluate the effectiveness of various monitoring techniques.

  14. Nearshore habitat and fish community associations of coaster brook trout in Isle Royale, Lake Superior

    USGS Publications Warehouse

    Gorman, O.T.; Moore, S.A.; Carlson, A.J.; Quinlan, H.R.

    2008-01-01

    We characterized the nearshore habitat and fish community composition of approximately 300 km of shoreline within and adjacent to the major embayments of Isle Royale, Lake Superior. Sampling yielded 17 species, of which 12 were widespread and represented a common element of the Lake Superior fish community, including cisco Coregonus artedi, lake whitefish C. clupeaformis, round whitefish Prosopium cylindraceum, lake trout Salvelinus namaycush, rainbow smelt Osmerus mordax, lake chub Couesius plumbeus, longnose sucker Catostomus catostomus, white sucker C. commersonii, trout-perch Percopsis omiscomaycus, ninespine stickleback Pungitius pungitius, burbot Lota lota, and slimy sculpin Cottus cognatus. The presence of brook trout S. fontinalis in an embayment was associated with the common species of the Isle Royale nearshore fish community, particularly cisco, longnose sucker, and round whitefish. However, brook trout were present in only five embayments and were common only in Tobin Harbor. Most Isle Royale embayments had broadly overlapping ranges of nearshore habitats. Within embayments, fish were distributed along a habitat gradient from less-protected rocky habitat near the mouth to highly protected habitat with mixed and finer substrates at the head. Embayments with brook trout had greater mean protection from the open lake, greater variation in depth, greater mean cover, and higher mean frequencies of large substrates (cobble, boulder, and bedrock). Within those embayments, brook trout were associated with habitat patches with higher mean frequencies of small substrates (particularly sand and coarse gravel). Within Tobin Harbor, brook trout were associated with midembayment habitat and species assemblages, especially those locations with a mixture of sand, gravel, and cobble substrates, an absence of bedrock, and the presence of round whitefish, white sucker, and trout-perch. Comparison of embayments with the model, Tobin Harbor, showed that six embayments

  15. 2014 Earthquake Swarm in Northwest Brooks Range, Alaska

    NASA Astrophysics Data System (ADS)

    Ruppert, N. A.; Holtkamp, S. G.

    2014-12-01

    An unusual sequence of earthquakes in NW Brooks Range region of Alaska began with two magnitude 5.7 earthquakes within minutes of each other on April 18, 2014. These events were followed by a vigorous aftershock sequence with many aftershocks reaching magnitude 4 and higher. Later, three more magnitude 5.7 earthquakes occurred in the same source region on May 3, June 7 and June 16. Earthquake source mechanisms indicate normal faulting on SE-NW striking fault planes. The source region is located ~20 km NE of the Noatak village and ~40 km S of the Red Dog Mine. A magnitude 5.5 occurred in this area in 1981. The 1981 sequence also exhibited a swarm-like behavior over the course of 6 months. Detection and reporting of these earthquakes is complicated by sparseness of seismic network in NW Alaska. At the time of April 18 earthquake the nearest seismic site was located at the Red Dog Mine, with the next nearest station 350 km away. Following the May 3 event, the Alaska Earthquake Center installed two additional temporary stations, one in Noatak and another in Kotzebue, 85 km S of the source area. Overall, 450 events were reported in this sequence through end of July. The catalog magnitude of completeness with the additional stations was about ~2.2. We applied waveform template matching algorithm to detect additional events in this sequence that could not be detected with the standard network processing. The template matching resulted in ~600 additional event detections. The waveform cross-correlation indicates that most of the events are not repeating sources. From the catalogued events, only 6% of event pairs have correlation coefficients of 0.75 or higher. We were able to identify only a few families of repeating events. Only one family seemed to be present throughout the entire sequence, while other event families were mostly short-lived. We find preliminary evidence that the earthquakes migrated to shallower depths throughout the sequence, consistent with the

  16. Structure of the Red Dog District, western Brooks Range, Alaska

    USGS Publications Warehouse

    de Vera, Jean-Pierre P.; McClay, K. R.

    2004-01-01

    The Red Dog district of the western Brooks Range of northern Alaska, which includes the sediment-hosted Zn-Pb-Ag ± Ba deposits at Red Dog, Su-Lik, and Anarraaq, contains one of the world's largest reserves of zinc. This paper presents a new model for the structural development of the area and shows that understanding the structure is crucial for future exploration efforts and new mineral discoveries in the district. In the Red Dog district, a telescoped Late Devonian through Jurassic continental passive margin is exposed in a series of subhorizontally stacked, internally imbricated, and regionally folded thrust sheets. These sheets were emplaced during the Middle Jurassic to Late Cretaceous Brookian orogeny and subsequently were uplifted by late tectonic activity in the Tertiary. The thrust sheet stack comprises seven tectonostratigraphically distinct allochthonous sheets, three of which have been subject to regional and detailed structural analysis. The lowermost of these is the Endicott Mountains allochthon, which is overlain by the structurally higher Picnic Creek and Kelly River allochthons. Each individual allochthon is itself internally imbricated into a series of tectonostratigraphically coherent and distinct thrust plates and subplates. This structural style gives rise to duplex development and imbrication at a range of scales, from a few meters to tens of kilometers. The variable mechanical properties of the lithologic units of the ancient passive margin resulted in changes in structural styles and scales of structures across allochthon boundaries. Structural mapping and analysis of the district indicate a dominant northwest to west-northwest direction of regional tectonic transport. Local north to north-northeast transport of thrust sheets is interpreted to reflect the influence of underlying lateral and/or oblique ramps, which may have been controlled by inherited basin margin structures. Some thrust-sheet stacking patterns suggest out

  17. Temperature and competition between bull trout and brook trout: A test of the elevation refuge hypothesis.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    We tested the elevation refuge hypothesis that colder water temperatures impart a competitive advantage to bull trout Salvelinus confluentus and thus account for increased biotic resistance to invasion and displacement by brook trout S. fontinalis in headwater streams. Growth, survival, and behavio...

  18. Modeling ecohydrologic processes at Hubbard Brook: Initial results for Watershed 6 stream discharge and chemistry

    EPA Science Inventory

    The Hubbard Brook Long Term Ecological Research site has produced some of the most extensive and long-running databases on the hydrology, biology and chemistry of forest ecosystem responses to climate and forest harvest. We used these long-term databases to calibrate and apply G...

  19. 75 FR 38716 - Safety Zone; Vietnam Veterans of America Fireworks Display, Brookings, OR

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-07-06

    ... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; Vietnam Veterans of America Fireworks... Veterans of America Fireworks Display near Brookings, Oregon. This action is necessary to ensure the safety... with fireworks displays on navigable waters. Accordingly, under 5 U.S.C. 553(b)(B), the Coast...

  20. Decontamination of Hot Cells and Hot Pipe Tunnel at NASA's Plum Brook Reactor Facility

    SciTech Connect

    Anderson, M.G.; Halishak, W.F.

    2008-07-01

    The large scale decontamination of the concrete Hot Cells and Hot Pipe Tunnel at NASA's Plum Brook Reactor Facility demonstrates that novel management and innovative methods are crucial to ensuring that the successful remediation of the most contaminated facilities can be achieved with minimal risk to the project stakeholders. (authors)

  1. IMPACTS OF MARINE AEROSOLS ON SURFACE WATER CHEMISTRY AT BEAR BROOK WATERSHED, MAINE USA

    EPA Science Inventory

    The East Bear catchment at Bear Brook Watershed, Maine receives moderate (for the eastern U.S.) amounts of Cl- in wet and dry deposition. In 1989, Cl- in precipitation ranged from 2 to 55 eq/L. Dry, occult, and wet deposition plus evapotranspiration resulted in stream Cl- averagi...

  2. The Spine of Literature: A Conversation between Eudora Welty and Cleanth Brooks.

    ERIC Educational Resources Information Center

    Taylor, Caroline

    1988-01-01

    Describes a discussion between Cleanth Brooks and Eudora Welty about the state of the story in today's fiction. Characterizes the narrative form as the spine of literature. Points out that, too often, contemporary writers neglect this form of writing and instead emphasize a type of prose poetry. Notes that authors today overemphasize the present…

  3. Brook trout nutritional analysis for inclusion into the USDA National Nutrient Database for Standard Reference

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Many species of wild game and fish that are legal to hunt or catch do not have nutrition information in the USDA National Nutrient Database for Standard Reference (SR). Among those species that lack nutrition information are brook trout. The research team worked with the Nutrient Data Laboratory wit...

  4. William Graham Brooke (1835-1907): Advocate of Girls' Superior Schooling in Nineteenth-Century Ireland

    ERIC Educational Resources Information Center

    McCormack, Christopher F.

    2015-01-01

    This paper examines the role of William Graham Brooke as advocate of women's higher education and access to university. His work as advocate is considered against the religious, political, social and economic backdrop of late nineteenth century Ireland. A barrister, as Clerk in the Lord Chancellor's office, he was centrally involved in the…

  5. Distribution of volatile organic compounds in sediments near Sutton Brook Disposal Area, Tewksbury, Massachusetts, May 2001

    USGS Publications Warehouse

    Church, P.E.; Lyford, F.P.; Clifford, Scott

    2002-01-01

    Ground water at the Sutton Brook Disposal Area, a former municipal landfill in Tewksbury, Massachusetts, located adjacent to Sutton Brook, a tributary of the Shawsheen River, is contaminated by volatile organic compounds (VOCs). Results from the use of passive-vapor-diffusion samplers show vapor concentrations of petroleum hydrocarbons as high as 500,000 parts per billion by volume in pore waters of streambed sediments along an approximate 2,000-foot reach of Sutton Brook where it flows between lobes of the former landfill. Petroleum hydrocarbons were also detected in the sediments on the eastern shore of Quarry Pond, which is south of the southern landfill lobe, with a maximum vapor concentration near 2,000 parts per billion by volume. Vapor concentrations of petroleum hydrocarbons in the sediments of Sutton Brook vary by two to three orders-of-magitude over distances of 50 to 100 feet. Chlorinated hydrocarbons also were detected with passive-vapor-diffusion samplers, but generally at locations downstream of where petroleum hydrocarbons were detected, and mostly at vapor concentrations of less than 100 parts per billion by volume.

  6. EXPERIMENTAL ACIDIFICATION CAUSES SOIL BASE-CATION DEPLETION AT THE BEAR BROOK WATERSHED IN MAINE

    EPA Science Inventory

    There is concern that changes in atmospheric deposition, climate, or land use have altered the biogeochemistry of forests causing soil base-cation depletion, particularly Ca. The Bear Brook Watershed in Maine (BBWM) is a paired watershed experiment with one watershed subjected to...

  7. EFFECTS OF PHOTOPERIOD MANIPULATION ON BROOK TROUT REPRODUCTIVE DEVELOPMENT, FECUNDITY, AND CIRCULATING SEX STEROID CONCENTRATIONS

    EPA Science Inventory

    The goal of this study was to determine the feasibility of conducting reproductive studies with brook trout Salvelinus fontinalis at times other than the normal fall-spawning period...Overall viability of embryos from this spring spawning was slightly lower than the average viabi...

  8. Biological consequences of the coaster brook trout restoration stocking program in Lake Superior tributaries with Pictured Rocks National Lakeshore

    USGS Publications Warehouse

    Leonard, Jill B.K.; Stott, Wendylee; Loope, Delora M.; Kusnierz, Paul C.; Sreenivasan, Ashwin

    2013-01-01

    The coaster Brook Trout Salvelinus fontinalis is a Lake Superior ecotype representing intraspecific variation that has been impacted by habitat loss and overfishing. Hatchery strains of Brook Trout derived from populations in Lake Superior were stocked into streams within Pictured Rocks National Lakeshore, Michigan, as part of an effort to rehabilitate adfluvial coaster Brook Trout. Wild and hatchery Brook Trout from three streams (Mosquito River, Hurricane River, and Sevenmile Creek) were examined for movement behavior, size, physiology, and reproductive success. Behavior and size of the stocked fish were similar to those of wild fish, and less than 15% of the stocked, tagged Brook Trout emigrated from the river into which they were stocked. There was little evidence of successful reproduction by stocked Brook Trout. Similar to the results of other studies, our findings suggest that the stocking of nonlocal Brook Trout strains where a local population already exists results in limited natural reproduction and should be avoided, particularly if the mechanisms governing the ecotype of interest are poorly understood.

  9. Clinical observation and neurological outcomes in "Alice in Wonderland" syndrome.

    PubMed

    Ho, C S; Shen, E Y; Liaw, S B; Huang, F Y

    1992-01-01

    Ten patients, aged from 3 to 10 years, who had either had attacks of perception errors of body schema and objects or had visual hallucination were enrolled from 1987 to 1990. Seven were boys and three, girls. The metamorphopsia or visual hallucination that has been named the "Alice in Wonderland syndrome" (AIWS) were the leading presentations. All the patients had preceding episodes of upper respiratory tract infection (URI) from two days to four weeks previously except for one who had had chickenpox within the immediate three days of being seen. Among these patients, six had received serological studies for Epstein-Barr (EB) virus infection. Two patients were indeed victims of acute EB virus infection as documented by positive IgM antibody against EB virus capsid antigen, the other three patients were highly suspected of having had recent EB virus infection as suggested by positive Heterophil antibody test and high IgG antibody titer against EB virus capsid antigen (1:320X). The duration of perception disorder ranged from four days to three months. All cases recovered completely, without sequelae. It is emphasized that any young children who present as acute episodes of AIWS should undergo examination for EB virus infection. The neurological outcome of AIWS seems to be good. PMID:1325095

  10. Recent COMPASS results and future prospects for ALICE

    SciTech Connect

    Chung, Suh-Urk

    2015-04-10

    The COMPASS Collaboration has accumulated the world’s highest statistics on the reaction π{sup −} p → π{sup +}π{sup −}π{sup −} p at 190 GeV/c. The results, presented in Section 1, show that a new state J{sup PC} = 1{sup ++} state never reported before, the a{sub 1}(1420), decaying to f{sub 0}(980)π followed by f{sub 0}(980) → ππ. In addition, the Collaboration reports an exotic J{sup PC} = 1{sup −+} state, the π{sub 1}(1600), which cannot be a quarkonium. Both states are likely to be a tetra-quark, i.e. qq{sup ¯}+qq{sup ¯} or a gluonic hybrid, a qq{sup ¯} object with an excited gluon inside it. Section 2 is devoted to a brief discussion of the central production of resonances, which is being investigated by both COMPASS and ALICE collaborations. However, the results are not yet released, so it is limited to a broad discussion of the central production, with emphasis on different analyses dictated by differences in the experimental setup.

  11. Orthos, an alarm system for the ALICE DAQ operations

    NASA Astrophysics Data System (ADS)

    Chapeland, Sylvain; Carena, Franco; Carena, Wisla; Chibante Barroso, Vasco; Costa, Filippo; Denes, Ervin; Divia, Roberto; Fuchs, Ulrich; Grigore, Alexandru; Simonetti, Giuseppe; Soos, Csaba; Telesca, Adriana; Vande Vyvre, Pierre; von Haller, Barthelemy

    2012-12-01

    ALICE (A Large Ion Collider Experiment) is the heavy-ion detector studying the physics of strongly interacting matter and the quark-gluon plasma at the CERN LHC (Large Hadron Collider). The DAQ (Data Acquisition System) facilities handle the data flow from the detectors electronics up to the mass storage. The DAQ system is based on a large farm of commodity hardware consisting of more than 600 devices (Linux PCs, storage, network switches), and controls hundreds of distributed hardware and software components interacting together. This paper presents Orthos, the alarm system used to detect, log, report, and follow-up abnormal situations on the DAQ machines at the experimental area. The main objective of this package is to integrate alarm detection and notification mechanisms with a full-featured issues tracker, in order to prioritize, assign, and fix system failures optimally. This tool relies on a database repository with a logic engine, SQL interfaces to inject or query metrics, and dynamic web pages for user interaction. We describe the system architecture, the technologies used for the implementation, and the integration with existing monitoring tools.

  12. Strangeness Production in Jets with ALICE at the LHC

    NASA Astrophysics Data System (ADS)

    Smith, Chrismond; Harton, Austin; Garcia, Edmundo; Alice Collaboration

    2016-03-01

    The study of strange particle production is an important tool for understanding the properties of the hot and dense QCD medium created in heavy-ion collisions at ultra-relativistic energies. The study of strange particles in these collisions provides information on parton fragmentation, a fundamental QCD process. While measurements at low and intermediate pT, are already in progress at the LHC, the study of high momentum observables is equally important for a complete understanding of the QCD matter, this can be achieved by studying jet interactions. We propose the measurement of the characteristics of the jets containing strange particles. Starting with proton-proton collisions, we have calculated the inclusive pTJet spectra and the spectra for jets containing strange particles (K-short or lambda), and we are extending this analysis to lead-lead collisions. In this talk the ALICE experiment will be described, the methodology used for the data analysis and the available results will be discussed. This material is based upon work supported by the National Science Foundation under Grants PHY-1305280 and PHY-1407051.

  13. A continuous read-out TPC for the ALICE upgrade

    NASA Astrophysics Data System (ADS)

    Lippmann, C.

    2016-07-01

    The largest gaseous Time Projection Chamber (TPC) in the world, the ALICE TPC, will be upgraded based on Micro Pattern Gas Detector technology during the second long shutdown of the CERN Large Hadron Collider in 2018/19. The upgraded detector will operate continuously without the use of a triggered gating grid. It will thus be able to read all minimum bias Pb-Pb events that the LHC will deliver at the anticipated peak interaction rate of 50 kHz for the high luminosity heavy-ion era. New read-out electronics will send the continuous data stream to a new online farm at rates up to 1 TByte/s. A fractional ion feedback of below 1% is required to keep distortions due to space charge in the TPC drift volume at a tolerable level. The new read-out chambers will consist of quadruple stacks of Gas Electron Multipliers (GEM), combining GEM foils with a different hole pitch. Other key requirements such as energy resolution and operational stability have to be met as well. A careful optimisation of the performance in terms of all these parameters was achieved during an extensive R&D program. A working point well within the design specifications was identified with an ion backflow of 0.63%, a local energy resolution of 11.3% (sigma) and a discharge probability comparable to that of standard triple GEM detectors.

  14. Influence of landscape-scale factors in limiting brook trout populations in Pennsylvania streams

    USGS Publications Warehouse

    Kocovsky, P.M.; Carline, R.F.

    2006-01-01

    Landscapes influence the capacity of streams to produce trout through their effect on water chemistry and other factors at the reach scale. Trout abundance also fluctuates over time; thus, to thoroughly understand how spatial factors at landscape scales affect trout populations, one must assess the changes in populations over time to provide a context for interpreting the importance of spatial factors. We used data from the Pennsylvania Fish and Boat Commission's fisheries management database to investigate spatial factors that affect the capacity of streams to support brook trout Salvelinus fontinalis and to provide models useful for their management. We assessed the relative importance of spatial and temporal variation by calculating variance components and comparing relative standard errors for spatial and temporal variation. We used binary logistic regression to predict the presence of harvestable-length brook trout and multiple linear regression to assess the mechanistic links between landscapes and trout populations and to predict population density. The variance in trout density among streams was equal to or greater than the temporal variation for several streams, indicating that differences among sites affect population density. Logistic regression models correctly predicted the absence of harvestable-length brook trout in 60% of validation samples. The r 2-value for the linear regression model predicting density was 0.3, indicating low predictive ability. Both logistic and linear regression models supported buffering capacity against acid episodes as an important mechanistic link between landscapes and trout populations. Although our models fail to predict trout densities precisely, their success at elucidating the mechanistic links between landscapes and trout populations, in concert with the importance of spatial variation, increases our understanding of factors affecting brook trout abundance and will help managers and private groups to protect and

  15. A comparative and experimental evaluation of performance of stocked diploid and triploid brook trout

    USGS Publications Warehouse

    Budy, Phaedra E.; Thiede, G.P.; Dean, A.; Olsen, D.; Rowley, G.

    2012-01-01

    Despite numerous negative impacts, nonnative trout are still being stocked to provide economically and socially valuable sport fisheries in western mountain lakes. We evaluated relative performance and potential differences in feeding strategy and competitive ability of triploid versus diploid brook trout Salvelinus fontinalis in alpine lakes, as well as behavioral and performance differences of diploid and triploid brook trout in two controlled experimental settings: behavioral experiments in the laboratory and performance evaluations in ponds. Across lakes, catch per unit effort (CPUE) and relative weight (Wr ) were not significantly different between ploidy levels. Mean sizes were also similar between ploidy levels except in two of the larger lakes where diploids attained slightly larger sizes (approximately 20 mm longer). We observed no significant differences between diploids and triploids in diet, diet preference, or trophic structure. Similarly, growth and condition did not differ between ploidy levels in smaller-scale pond experiments, and aggressive behavior did not differ between ploidy levels (fed or unfed fish trials) in the laboratory. Independent of ploidy level, the relative performance of brook trout varied widely among lakes, a pattern that appeared to be a function of lake size or a factor that covaries with lake size such as temperature regime or carrying capacity. In summary, we observed no significant differences in the relative performance of brook trout from either ploidy level across a number of indices, systems, and environmental conditions, nor any indication that one group is more aggressive or a superior competitor than the other. Collectively, these results suggest that triploid brook trout will offer a more risk-averse and promising management opportunity when they are stocked to these lakes and elsewhere to simultaneously meet the needs for the sport fishery and conservation objectives.

  16. Brook trout movement in response to temperature, flow, and thermal refugia within a complex Appalachian riverscape

    USGS Publications Warehouse

    Petty, J. Todd; Hansbarger, Jeff L.; Huntsman, Brock M.; Mazik, Patricia M.

    2012-01-01

    We quantified movements of brook trout Salvelinus fontinalis and brown trout Salmo trutta in a complex riverscape characterized by a large, open-canopy main stem and a small, closed-canopy tributary in eastern West Virginia, USA. Our objectives were to quantify the overall rate of trout movement and relate movement behaviors to variation in streamflow, water temperature, and access to coldwater refugia. The study area experienced extremely high seasonal, yearly, and among-stream variability in water temperature and flow. The relative mobility of brook trout within the upper Shavers Fork watershed varied significantly depending on whether individuals resided within the larger main stem or the smaller tributary. The movement rate of trout inhabiting the main stem during summer months (50 m/d) was an order of magnitude higher than that of tributary fish (2 m/d). Movement rates of main-stem-resident brook trout during summer were correlated with the maximum water temperature experienced by the fish and with the fish's initial distance from a known coldwater source. For main-stem trout, use of microhabitats closer to cover was higher during extremely warm periods than during cooler periods; use of microhabitats closer to cover during warm periods was also greater for main-stem trout than for tributary inhabitants. Main-stem-resident trout were never observed in water exceeding 19.5°C. Our study provides some of the first data on brook trout movements in a large Appalachian river system and underscores the importance of managing trout fisheries in a riverscape context. Brook trout conservation in this region will depend on restoration and protection of coldwater refugia in larger river main stems as well as removal of barriers to trout movement near tributary and main-stem confluences.

  17. Grid Computing at GSI for ALICE and FAIR - present and future

    NASA Astrophysics Data System (ADS)

    Schwarz, Kilian; Uhlig, Florian; Karabowicz, Radoslaw; Montiel-Gonzalez, Almudena; Zynovyev, Mykhaylo; Preuss, Carsten

    2012-12-01

    The future FAIR experiments CBM and PANDA have computing requirements that fall in a category that could currently not be satisfied by one single computing centre. One needs a larger, distributed computing infrastructure to cope with the amount of data to be simulated and analysed. Since 2002, GSI operates a tier2 center for ALICE@CERN. The central component of the GSI computing facility and hence the core of the ALICE tier2 centre is a LSF/SGE batch farm, currently split into three subclusters with a total of 15000 CPU cores shared by the participating experiments, and accessible both locally and soon also completely via Grid. In terms of data storage, a 5.5 PB Lustre file system, directly accessible from all worker nodes is maintained, as well as a 300 TB xrootd-based Grid storage element. Based on this existing expertise, and utilising ALICE's middleware ‘AliEn’, the Grid infrastructure for PANDA and CBM is being built. Besides a tier0 centre at GSI, the computing Grids of the two FAIR collaborations encompass now more than 17 sites in 11 countries and are constantly expanding. The operation of the distributed FAIR computing infrastructure benefits significantly from the experience gained with the ALICE tier2 centre. A close collaboration between ALICE Offline and FAIR provides mutual advantages. The employment of a common Grid middleware as well as compatible simulation and analysis software frameworks ensure significant synergy effects.

  18. The GridKa Tier-1 Computing Center within the ALICE Grid Framework

    NASA Astrophysics Data System (ADS)

    Park, WooJin J.; Christopher, Jung; Heiss, Andreas; Petzold, Andreas; Schwarz, Kilian

    2014-06-01

    The GridKa computing center, hosted by Steinbuch Centre for Computing at the Karlsruhe Institute for Technology (KIT) in Germany, is serving as the largest Tier-1 center used by the ALICE collaboration at the LHC. In 2013, GridKa provides 30k HEPSPEC06, 2.7 PB of disk space, and 5.25 PB of tape storage to ALICE. The 10Gbit/s network connections from GridKa to CERN, several Tier-1 centers and the general purpose network are used by ALICE intensively. In 2012 a total amount of ~1 PB was transferred to and from GridKa. As Grid framework, AliEn (ALICE Environment) is being used to access the resources, and various monitoring tools including the MonALISA (MONitoring Agent using a Large Integrated Services Architecture) are always running to alert in case of any problem. GridKa on-call engineers provide 24/7 support to guarantee minimal loss of availability of computing and storage resources in case of hardware or software problems. We introduce the GridKa Tier-1 center from the viewpoint of ALICE services.

  19. Distributed Russian Tier-2 - RDIG in Simulation and Analysis of Alice Data From LHC

    NASA Astrophysics Data System (ADS)

    Bogdanov, A.; Jancurova, L.; Kiryanov, A.; Kotlyar, V.; Mitsyn, V.; Lyublev, Y.; Ryabinkin, E.; Shabratova, G.; Smirnov, S.; Stepanova, L.; Urazmetov, W.; Zarochentsev, A.

    2011-12-01

    On the threshold of LHC data there were intensive test and upgrade of GRID application software for all LHC experiments at the top of the modern LCG middleware (gLite). The update of such software for ALICE experiment at LHC, AliEn[1] had provided stable and secure operation of sites developing LHC data. The activity of Russian RDIG (Russian Data Intensive GRID) computer federation which is the distributed Tier-2 centre are devoted to simulation and analysis of LHC data in accordance with the ALICE computing model [2]. Eight sites of this federation interesting in ALICE activity upgrade their middle ware in accordance with requirements of ALICE computing what ensured success of MC production and end-user analysis activity at all eight sites. The result of occupancy and efficiency of each site in the time of LHC operation will be presented in the report. The outline the results of CPU and disk space usage at RDIG sites for the data simulation and analysis of first LHC data from the exposition of ALICE detector [3] will be presented as well. There will be presented also the information about usage of parallel analysis facility based on PROOF [4].

  20. The Life of the Party: Alice McGrath, Multiracial Coalitions, and the Struggle for Social Justice

    ERIC Educational Resources Information Center

    Armbruster-Sandoval, Ralph

    2011-01-01

    This essay explores the life of Alice Greenfield McGrath, a key player in the Sleepy Lagoon Defense Committee and a longtime activist whose involvement in social justice issues spanned eight decades. While best known for her role in the Sleepy Lagoon case in the 1940s, Alice fought the "good fight" for virtually her entire life, supporting the…

  1. Recent developments of the arbitrary Lagrangian-Eulerian containment code ALICE-II. [LMFBR

    SciTech Connect

    Wang, C.Y.; Zeuch, W.R.

    1983-01-01

    The ANL arbitrary Lagrangian Eulerian containment code ALICE was developed for use in fast reactor containment studies and is particularly suited for problems involving complex fluid-structure interactions. Many improvements have been made which has resulted in a second version of the code, ALICE-II. A selection of some important improvements are given in this paper. To realistically analyze the above-core hydrodynamics containing a movable upper internal structure (UIS), a 3-D pipe element has been adopted to calculate the response of the UIS columns that connect the UIS to the vessel head. A corotational coordinate scheme for large displacement, small strain, elastic-plastic structural-dynamic analysis is utilized in the formulation. Both geometric and material nonlinearities are considered. The governing equations are integrated explicitly using a central difference procedure. Many sample problems are presented, including comparisons of ALICE-II and ICECO-CEL results on the APRICOT Phase 3 problems.

  2. Profiles in Performing Arts Medicine Courage--A Tribute to Dr. Alice Brandfonbrener.

    PubMed

    Manchester, Ralph A

    2015-09-01

    I was honored and privileged to join Dr. Robert Sataloff in delivering a tribute to Dr. Alice Brandfonbrener at the 2015 Symposium on the Medical Problems of Performing Artists in Snowmass, Colorado. As virtually everyone who reads this journal knows, Dr. Brandfonbrener organized the first symposium (then focused on the medical problems of musicians), was the founding editor of Medical Problems of Performing Artists, and was the first president of the Performing Arts Medicine Association. She died in 2014, just prior to last year's symposium. This year, after Dr. Sataloff presented a very engaging overview of Alice's career and impressive accomplishments, I gave a short address that was based on some of the editorials Alice wrote in this journal during her 20 year tenure as editor. I have chosen a few examples of how the courage that she demonstrated in launching an international medical conference, a peer-reviewed medical journal, and a professional association continued to present itself in her writing.

  3. ALICE Grid Computing at the GridKa Tier-1 Center

    NASA Astrophysics Data System (ADS)

    Jung, C.; Petzold, A.; Pfeiler, C.-E.; Schwarz, K.

    2012-12-01

    The GridKa center at the Karlsruhe Institute of Technology is the largest ALICE Tier-1 center. It hosts 40,000 HEPSEPC'06, approximately 2.75 PB of disk space, and 5.25 PB of tape space for the ‘A Large Ion Collider Experiment’ (ALICE), at the CERN Large Hadron Collider (LHC). These resources are accessed via the AliEn (ALICE Environment) middleware. The storage is divided into two instances, both using the storage middleware xrootd. We will focus on the set-up of these resources and on the topic of monitoring. The latter serves a vast number of purposes, ranging from efficiency statistics for process and procedure optimization to alerts for on-call duty engineers.

  4. Recent Developments on ALICE (Accelerators and Lasers In Combined Experiments) at Daresbury Laboratory

    SciTech Connect

    Saveliev, Y M; Buckley, R K; Buckley, S R; Clarke, J A; Corlett, P A; Dunning, D J; Goulden, A R; Hill, S F; Jackson, F; Jamison, S P; Jones, J K; Jones, L B; Leonard, S; McIntosh, P A; McKenzie, J W; Middleman, K J; Militsyn, B L; Moss, A J; Muratori, B D; Orrett, J F; Pattalwar, S M; Phillips, P J; Scott, D J; Seddon, E A; Shepherd, B.J.A.; Smith, S L; Thompson, N; Wheelhouse, A E; Williams, P H; Harrison, P; Holder, D J; Holder, G M; Schofield, A L; Weightman, P; Williams, R L; Laundry, D; Powers, T; Priebe, G; Surman, M

    2010-05-01

    Progress made in ALICE (Accelerators and Lasers In Combined Experiments) commissioning and a summary of the latest experimental results are presented in this paper. After an extensive work on beam loading effects in SC RF linac (booster) and linac cavities conditioning, ALICE can now operate in full energy recovery mode at the bunch charge of 40pC, the beam energy of 30MeV and train lengths of up to 100us. This improved operation of the machine resulted in generation of coherently enhanced broadband THz radiation with the energy of several tens of uJ per pulse and in successful demonstration of the Compton Backscattering x-ray source experiment. The next steps in the ALICE scientific programme are commissioning of the IR FEL and start of the research on the first non-scaling FFAG accelerator EMMA. Results from both projects will be also reported.

  5. "Princess Alice is watching you": children's belief in an invisible person inhibits cheating.

    PubMed

    Piazza, Jared; Bering, Jesse M; Ingram, Gordon

    2011-07-01

    Two child groups (5-6 and 8-9 years of age) participated in a challenging rule-following task while they were (a) told that they were in the presence of a watchful invisible person ("Princess Alice"), (b) observed by a real adult, or (c) unsupervised. Children were covertly videotaped performing the task in the experimenter's absence. Older children had an easier time at following the rules but engaged in equal levels of purposeful cheating as the younger children. Importantly, children's expressed belief in the invisible person significantly determined their cheating latency, and this was true even after controlling for individual differences in temperament. When "skeptical" children were omitted from the analysis, the inhibitory effects of being told about Princess Alice were equivalent to having a real adult present. Furthermore, skeptical children cheated only after having first behaviorally disconfirmed the "presence" of Princess Alice. The findings suggest that children's belief in a watchful invisible person tends to deter cheating.

  6. Performing track reconstruction at the ALICE TPC using a fast Hough Transform method

    NASA Astrophysics Data System (ADS)

    Kouzinopoulos, Charalampos S.; Hristov, Peter

    2016-09-01

    The Hough Transform algorithm is a popular image analysis method that is widely used to perform global pattern recognition in images through the identification of local patterns in a suitably chosen parameter space. The algorithm can also be used to perform track reconstruction; to estimate the trajectory of individual particles when passed through the active elements of a detector volume. This paper presents a fast reconstruction method for the Time Projection Chamber (TPC) of the ALICE experiment at LHC. The method, that combines a linear Hough Transform algorithm with a fast filling of the Hough Transform parameter space, is developed within AliceO2, the new computing framework of ALICE for RUN3.

  7. Ontogenetic and diel variation in stream habitat use by brook trout (Salvelinus fontinalis) in a headwater stream

    USGS Publications Warehouse

    Johnson, J.H.; Ross, R.M.; Dropkin, D.S.; Redell, L.A.

    2011-01-01

    Although considerable information exists on habitat use by stream salmonids, only a small portion has quantitatively examined diurnal and nocturnal habitat variation. We examined diel variation in habitat use by age-0 and age-1+ brook trout (Salvelinus fontinalis) during summer and autumn in a headwater stream in northern Pennsylvania. Habitat variables measured included cover, depth, substrate, and velocity. The most pronounced diel variation occurred in the use of cover during both seasons. Both age-0 brook trout and age-1+ trout were associated with less cover at night. Age-0 brook trout occupied swifter water during the day than at night during both seasons, but the difference was not significant. Increased cover, depth, and substrate size governed the habitat of age-1+ brook trout. Our findings support the need for a better understanding of diel differences in habitat use of stream salmonids when considering habitat enhancement and protection.

  8. Geomorphic, flood, and groundwater-flow characteristics of Bayfield Peninsula streams, Wisconsin, and implications for brook-trout habitat

    USGS Publications Warehouse

    Fitzpatrick, Faith A.; Peppler, Marie C.; Saad, David A.; Pratt, Dennis M.; Lenz, Bernard N.

    2015-01-01

    Available brook-trout habitat is dependent on the locations of groundwater upwellings, the sizes of flood peaks, and sediment loads. Management practices that focus on reducing or slowing runoff from upland areas a

  9. Alice in Wonderland syndrome and upper airway obstruction in infectious mononucleosis.

    PubMed

    Piessens, P; Indesteege, F; Lemkens, P

    2011-01-01

    The Alice in Wonderland syndrome is a rare clinical feature characterised by perceptual disturbances including visual disturbances and distortion of the body image. This uncommon--but often easy to recognise--syndrome, to which children seem particularly susceptible, can be defined in patients with Epstein Barr Virus (EBV) infection. This report describes a 10-year-old child with a mild upper airway obstruction and manifestations of the Alice in Wonderland syndrome resulting from an acute EBV infection. Because meningo-encephalitis was considered in the differential diagnosis, an MRI examination was performed under midazolam sedation, leading to a severe life-threatening upper airway obstruction. PMID:21563558

  10. Reversible palinopsia and the Alice in Wonderland syndrome associated with topiramate use in migraineurs.

    PubMed

    Evans, Randolph W

    2006-05-01

    Two patients are reported who developed palinopsia while taking topiramate for migraine prevention which resolved or decreased in frequency or duration on lower doses, but recurred or increased in frequency or duration on higher doses. Both patients had complete resolution of palinopsia when topiramate was discontinued. A third patient is described who developed the "Alice in Wonderland" syndrome about 1 week after starting topiramate for migraine prevention with complete resolution of symptoms about 1 month after stopping. Topiramate use may cause palinopsia and may be associated with the Alice in Wonderland syndrome through an unknown mechanism. PMID:16643588

  11. Readout electronics upgrade on ALICE/PHOS detector for Run 2 of LHC

    NASA Astrophysics Data System (ADS)

    Wang, D.; Zhang, F.; Feng, W.; Huang, G.; Song, Z.; Yin, Z.; Zhou, D.

    2015-02-01

    The ALICE/PHOS detector is carrying out a major upgrade of its readout electronics for the RUN 2 of LHC (2015-2017). A new architecture based on the point to point link is developed. The event readout rate can achieve 30 kHz by replacing the old parallel GTL bus with DTC links. The communication stability of the interface between front-end electronic boards and readout concentrators is significantly improved. A new FPGA firmware is designed to be compatible with the upgraded ALICE trigger system and DATE software.

  12. Delineation of Areas Contributing Water to the Dry Brook Public-Supply Well, South Hadley, Massachusetts

    USGS Publications Warehouse

    Garabedian, Stephen P.; Stone, Janet Radway

    2004-01-01

    Areas contributing water to the Dry Brook public-supply well in South Hadley, Massachusetts, were delineated with a numerical ground-water-flow model that is based on geologic and hydrologic information for the confined sand and gravel aquifer pumped by the supply well. The study area is along the Connecticut River in central Massachusetts, about 12 miles north of Springfield, Massachusetts. Geologic units in the study area consist of Mesozoic-aged sedimentary and igneous bedrock, late-Pleistocene glaciolacustrine sediments, and recent alluvial deposits of the Connecticut River flood plain. Dry Brook Hill, immediately south of the supply well, is a large subaqueous lacustrine fan and delta formed during the last glacial retreat by sediment deposition into glacial Lake Hitchcock from a meltwater tunnel that was likely near where the Connecticut River cuts through the Holyoke Range. The sediments that compose the aquifer grade from very coarse sand and gravel along the northern flank of the hill, to medium sands in the body of the hill, and to finer-grained sediments along the southern flank of the hill. The interbedded and overlapping fine-grained lacustrine sediments associated with Dry Brook Hill include varved silt and clay deposits. These fine-grained sediments form a confining bed above the coarse-grained aquifer at the supply well and partially extend under the Connecticut River adjacent to the supply well. Ground-water flow in the aquifer supplying water to Dry Brook well was simulated with the U.S. Geological Survey ground-water-flow modeling code MODFLOW. The Dry Brook aquifer model was calibrated to drawdown data collected from 8 observation wells during an aquifer test conducted by pumping the supply well for 10 days at a rate of 122.2 cubic feet per minute (ft3/min; 914 gallons per minute) and to water levels collected from observation wells across the study area. Generally, the largest hydraulic conductivity values used in the model were in the sand and

  13. Influence of species, size and relative abundance on the outcomes of competitive interactions between brook trout and juvenile coho salmon

    USGS Publications Warehouse

    Thornton, Emily J; Duda, Jeff; Quinn, Thomas P

    2016-01-01

    Resource competition between animals is influenced by a number of factors including the species, size and relative abundance of competing individuals. Stream-dwelling animals often experience variably available food resources, and some employ territorial behaviors to increase their access to food. We investigated the factors that affect dominance between resident, non-native brook trout and recolonizing juvenile coho salmon in the Elwha River, WA, USA, to see if brook trout are likely to disrupt coho salmon recolonization via interference competition. During dyadic laboratory feeding trials, we hypothesized that fish size, not species, would determine which individuals consumed the most food items, and that species would have no effect. We found that species, not size, played a significant role in dominance; coho salmon won 95% of trials, even when only 52% the length of their brook trout competitors. As the pairs of competing fish spent more time together during a trial sequence, coho salmon began to consume more food, and brook trout began to lose more, suggesting that the results of early trials influenced fish performance later. In group trials, we hypothesized that group composition and species would not influence fish foraging success. In single species groups, coho salmon consumed more than brook trout, but the ranges overlapped. Brook trout consumption remained constant through all treatments, but coho salmon consumed more food in treatments with fewer coho salmon, suggesting that coho salmon experienced more intra- than inter-specific competition and that brook trout do not pose a substantial challenge. Based on our results, we think it is unlikely that competition from brook trout will disrupt Elwha River recolonization by coho salmon.

  14. Isolation and cross-familial amplification of 41 microsatellites for the brook charr (Salvelinus fontinalis)

    USGS Publications Warehouse

    Perry, G.M.L.; King, T.L.; St. -Cyr, J.; Valcourt, M.; Bernatchez, L.

    2005-01-01

    The brook charr (Salvelinus fontinalis; Osteichthyes: Salmonidae) is a phenotypically diverse fish species inhabiting much of North America. But relatively few genetic diagnostic resources are available for this fish species. We isolated 41 microsatellites from S. fontinalis polymorphic in one or more species of salmonid fish. Thirty-seven were polymorphic in brook charr, 15 in the congener Arctic charr (Salvelinus alpinus) and 14 in the lake charr (Salvelinus namaycush). Polymorphism was also relatively high in Oncorhynchus, where 21 loci were polymorphic in rainbow trout (Oncorhynchus mykiss) and 16 in cutthroat trout (Oncorhynchus clarkii) but only seven and four microsatellite loci were polymorphic in the more distantly related lake whitefish (Coregonus clupeaformis) and Atlantic salmon (Salmo salar), respectively. One duplicated locus (Sfo228Lav) was polymorphic at both duplicates in S. fontinalis. ?? 2005 Blackwell Publishing Ltd.

  15. Stratigraphy, structure, and palinspastic synthesis of the western Brooks Range, northwestern Alaska

    USGS Publications Warehouse

    Mayfield, Charles F.; Tailleur, Irvin L.; Ellersieck, Inyo

    1983-01-01

    This report is an effort to describe and decipher the mid-Paleozoic to Lower Cretaceous stratigraphy and the orogenic evolution of the western Brooks Range. The western Brooks Range primarily is composed of stacks of complexly deformed thrust sheets that contain mostly coeval sequences of rocks with slightly different lithologic facies. In order to simplify the thrust-faulted stratigraphy and palinspastic restoration, the rocks are grouped into eight principal structural levels. The lowest structural level is believed to be autochthonous or parautochthonous and above that, each succeeding level is designated allochthon one through seven. Allochthon seven is composed of the remnants of an extensive ophiolite sheet. Allochthon six is composed of pillow basalt with subordinate intermediate volcanic rocks, chert, and Devonian limestone. It is not certain whether this allochthon was formed in a continental or oceanic setting. Allochthons five through one consist of distinctive and coeval sequences of Devonian to Lower Cretaceous sedimentary rocks that were deposited in a continental setting. The present geographic distribution of each structural level is shown on the allochthon map of the western Brooks Range. The stratigraphy of the southern part of northern Alaska has been reconstructed by systematically unstacking lower allochthons to the north of higher allochthons. The palinspastic map that results from this procedure shows that the minimum thrust displacement between allochthon seven and the autochthon is approximately 700 to 800 km. Schematic cross sections drawn across the palinspastic map show how the stratigraphy of the southern part of northern. Alaska most likely appeared prior to the orogeny. During Devonian and Mississippian time, the sedimentary sequences that are now part of allochthons one to five are inferred to have been deposited in an ensialic basin with both northern and southern margins. During Pennsylvanian time, the sequences seem to have become

  16. More than a corridor: use of a main stem stream as supplemental foraging habitat by a brook trout metapopulation.

    PubMed

    Huntsman, Brock M; Petty, J Todd; Sharma, Shikha; Merriam, Eric R

    2016-10-01

    Coldwater fishes in streams, such as brook trout (Salvelinus fontinalis), typically are headwater specialists that occasionally expand distributions downstream to larger water bodies. It is unclear, however, whether larger streams function simply as dispersal corridors connecting headwater subpopulations, or as critical foraging habitat needed to sustain large mobile brook trout. Stable isotopes (δ(13)C and δ(15)N) and a hierarchical Bayesian mixing model analysis was used to identify brook trout that foraged in main stem versus headwater streams of the Shavers Fork watershed, West Virginia. Headwater subpopulations were composed of headwater and to a lesser extent main stem foraging individuals. However, there was a strong relationship between brook trout size and main stem prey contributions. The average brook trout foraging on headwater prey were limited to 126 mm standard length. This size was identified by mixing models as a point where productivity support switched from headwater to main stem dependency. These results, similar to other studies conducted in this watershed, support the hypothesis that productive main stem habitat maintain large brook trout and potentially facilitates dispersal among headwater subpopulations. Consequently, loss of supplementary main stem foraging habitats may explain loss of large, mobile fish and subsequent isolation of headwater subpopulations in other central Appalachian watersheds.

  17. Kinematics of the mosquito terrane, Coldfoot Area, Alaska: Keys to Brooks Range tectonics: Final report, Project No. 2

    SciTech Connect

    Harms, T.A.; Coney, P.J.

    1988-04-01

    Within the large-scale geometry of the Brooks Range, the Angayucham terrane occurs as a vast overthrust sheet. From the north flank of the Ruby terrane it underlies the Koyukuk basin and stretches north as the roof thrust to the various nappe terranes of the Brooks Range. The tectonic relationship of the Ruby terrane to the south flank of the Brooks Range lies largely obscured beneath the Angayucham in the eastern apex of the Koyukuk basin. The Mosquito terrane occurs as a window through the Angayucham at this juncture. The composition and structures of the Mosquito terrane reveal that is the result of shear along a sub-horizontal step or flange within the prominent, through-going dextral strike-slip fault system which cuts across the eastern Koyukuk basin and southeastern Brooks Range. Units of the Mosquito were derived from both the Angayucham and Ruby terranes. A consistent tectonic fabric imposed upon them is kinematically linked to the strike-slip system and indicates a northeasterly direction of transport across the terrane. The presence of Ruby-correlative units within the Mosquito suggests the Ruby underlies the Angayucham and that it is in contact with terrances of the southern Brooks Range at that structural level along high-angle strike-slip faults. These relationships demonstrate that an episode of dextral transpression is the latest in the history of terrane accretion and tectonic evolution of the Brooks Range. 35 refs.

  18. More than a corridor: use of a main stem stream as supplemental foraging habitat by a brook trout metapopulation.

    PubMed

    Huntsman, Brock M; Petty, J Todd; Sharma, Shikha; Merriam, Eric R

    2016-10-01

    Coldwater fishes in streams, such as brook trout (Salvelinus fontinalis), typically are headwater specialists that occasionally expand distributions downstream to larger water bodies. It is unclear, however, whether larger streams function simply as dispersal corridors connecting headwater subpopulations, or as critical foraging habitat needed to sustain large mobile brook trout. Stable isotopes (δ(13)C and δ(15)N) and a hierarchical Bayesian mixing model analysis was used to identify brook trout that foraged in main stem versus headwater streams of the Shavers Fork watershed, West Virginia. Headwater subpopulations were composed of headwater and to a lesser extent main stem foraging individuals. However, there was a strong relationship between brook trout size and main stem prey contributions. The average brook trout foraging on headwater prey were limited to 126 mm standard length. This size was identified by mixing models as a point where productivity support switched from headwater to main stem dependency. These results, similar to other studies conducted in this watershed, support the hypothesis that productive main stem habitat maintain large brook trout and potentially facilitates dispersal among headwater subpopulations. Consequently, loss of supplementary main stem foraging habitats may explain loss of large, mobile fish and subsequent isolation of headwater subpopulations in other central Appalachian watersheds. PMID:27334869

  19. Exploring the potential of life-history key innovation: brook breeding in the radiation of the Malagasy treefrog genus Boophis.

    PubMed

    Vences, M; Andreone, F; Glaw, F; Kosuch, J; Meyer, A; Schaefer, H-C; Veith, M

    2002-08-01

    The treefrog genus Boophis is one of the most species-rich endemic amphibian groups of Madagascar. It consists of species specialized to breeding in brooks (48 species) and ponds (10 species). We reconstructed the phylogeny of Boophis using 16S ribosomal DNA sequences (558 bp) from 27 species. Brook-breeders were monophyletic and probably derived from an ancestral pond-breeding lineage. Pond-breeders were paraphyletic. The disparity in diversification among pond-breeders and brook-breeders was notable among endemic Malagasy frogs, although it was not significant when considering Boophis alone. Sibling species which have different advertisement calls but are virtually indistinguishable by morphology were common among brook-breeders; genetic divergence between these species was high (modal 8% total pairwise divergence). Substitution rates in brook-breeding species were significantly higher than in pond-breeders. Speciation of pond-breeders may be hindered by their usually more synchronous reproduction and a higher vagility which enhances gene flow, while a higher potential of spatial segregation and speciation may exist along brooks.

  20. X-linked mental retardation syndrome: Three brothers with the Brooks-Wisniewski-Brown syndrome

    SciTech Connect

    Morava, E.; Storcz, J.; Kosztolanyi, G.

    1996-07-12

    We report on 3 brothers with growth and mental retardation, bifrontal narrowness, short palpebral fissures, deeply set eyes with entropion, wide bulbous nose, small mouth, myopia, and spastic diplegia. The patients were born to normal and non-consanguineous parents. The similarity of our cases with those recently reported by Brooks et al. supports their suggestion that these patients are representative of a distinct entity. 8 refs., 3 figs., 1 tab.

  1. Preparation and Reactivity of Acyclic Chiral Allylzinc Species by a Zinc-Brook Rearrangement.

    PubMed

    Leibeling, Markus; Shurrush, Khriesto A; Werner, Veronika; Perrin, Lionel; Marek, Ilan

    2016-05-10

    The zinc-Brook rearrangement of enantiomerically enriched α-hydroxy allylsilane produces a chiral allylzinc intermediate, which reacts with retention of configuration in the presence of an electrophile. Two remarkable features of this transformation are the stereochemical outcome during the formation of the allylzinc species and the complete stereocontrol in the organized six-membered transition state, which leads to an overall and complete transfer of chirality within the reaction sequence. PMID:27061357

  2. Brook Rearrangement as a Trigger for the Ring Opening of Strained Carbocycles.

    PubMed

    Zhang, Fa-Guang; Eppe, Guillaume; Marek, Ilan

    2016-01-11

    The combined regio- and stereoselective carbometalation of cyclopropenyl amides, followed by the addition of an acyl silane, led to the formation of polysubstituted cyclopropyl derivatives as unique diastereoisomers. Upon warming of the reaction mixture to room temperature, a Brook rearrangement proceeded with inversion of configuration to provide ready access to δ-ketoamides possessing a quaternary carbon center with high enantiomeric ratios through selective C-C bond cleavage of the ring. PMID:26663399

  3. Permian deposition in the north central Brooks Range, Alaska Constraints for tectonic reconstructions

    USGS Publications Warehouse

    Adams, K.E.; Mull, C.G.; Crowder, R.K.

    1997-01-01

    Two opposing tectonic models have been offered to explain the regional structural relations in the north central Brooks Range fold-thrust belt of northern Alaska. The first suggests that rocks of the northern Endicott Mountains were thrust from south to north over the area of the present Mount Doonerak high and are therefore highly allochthonous. The second implies that the rocks of the northern Endicott Mountains were deposited in a basin that lay north of the Mount Doonerak high and later were thrust a short distance southward onto the northern flank of the high and are thus parautochthonous. To provide stratigraphic constraints for these models, this study examines Permian facies of the north central Brooks Range. Permian rocks in the north central Brooks Range comprise a thin (40 to 160 m thick), fining-upward succession of clastic, storm-influenced shelf deposits. When the rocks of the northern Endicott Mountains are restored south of the Mount Doonerak area, a minimum distance of 80 km, the Permian deposits grade systematically from distal facies (Siksikpuk Formation) in the southwest to proximal facies (Echooka Formation) in the northeast. Facies trends in the reconstructed Permian basin include, from southwest to northeast, (1) an increase in carbonate content and corresponding decrease in silica content, (2) a general darkening and thickening of shaley intervals, (3) an increase in proximal features of storm beds, including coarser, thicker, more abundant, and more closely spaced beds, and (4) an increase in abundance and diversity of the faunal assemblage with a corresponding decrease in age. These stratigraphic relations imply that rocks of the northern Endicott Mountains are allochthonous and structurally overlie a proximal stratigraphic succession similar to that exposed in the Mount Doonerak area and northeastern Brooks Range. Copyright 1997 by the American Geophysical Union.

  4. Brook Rearrangement as a Trigger for the Ring Opening of Strained Carbocycles.

    PubMed

    Zhang, Fa-Guang; Eppe, Guillaume; Marek, Ilan

    2016-01-11

    The combined regio- and stereoselective carbometalation of cyclopropenyl amides, followed by the addition of an acyl silane, led to the formation of polysubstituted cyclopropyl derivatives as unique diastereoisomers. Upon warming of the reaction mixture to room temperature, a Brook rearrangement proceeded with inversion of configuration to provide ready access to δ-ketoamides possessing a quaternary carbon center with high enantiomeric ratios through selective C-C bond cleavage of the ring.

  5. Preparation and Reactivity of Acyclic Chiral Allylzinc Species by a Zinc-Brook Rearrangement.

    PubMed

    Leibeling, Markus; Shurrush, Khriesto A; Werner, Veronika; Perrin, Lionel; Marek, Ilan

    2016-05-10

    The zinc-Brook rearrangement of enantiomerically enriched α-hydroxy allylsilane produces a chiral allylzinc intermediate, which reacts with retention of configuration in the presence of an electrophile. Two remarkable features of this transformation are the stereochemical outcome during the formation of the allylzinc species and the complete stereocontrol in the organized six-membered transition state, which leads to an overall and complete transfer of chirality within the reaction sequence.

  6. In vivo SPECT and ex vivo autoradiographic brain imaging of the novel selective CB1 receptor antagonist radioligand [125I]SD7015 in CB1 knock-out and wildtype mouse

    PubMed Central

    Máthé, Domokos; Horváth, Ildikó; Szigeti, Krisztián; Donohue, Sean R.; Pike, Victor W.; Jia, Zisheng; Ledent, Catherine; Palkovits, Miklós; Freund, Tamás F.; Halldin, Christer; Gulyás, Balázs

    2014-01-01

    We aimed to evaluate the novel high-affinity and relatively lipophilic CB1 receptor (CB1R) antagonist radioligand [125I]SD7015 for SPECT imaging of CB1Rs in vivo using the multiplexed multipinhole dedicated small animal SPECT/CT system, NanoSPECT/CTPLUS (Mediso, Budapest, Hungary), in knock-out CB1 receptor knock-out (CB1R-/-) and wildtype mice. In order to exclude possible differences in cerebral blood flow between the two types of animals, HMPAO SPECT scans were performed, whereas in order to confirm the brain uptake differences of the radioligand between knock-out mice and wildtype mice, in vivo scans were complemented with ex vivo autoradiographic measurements using the brains of the same animals. With SPECT/CT imaging, we measured the brain uptake of radioactivity, using %SUV (% standardised uptake values) in CB1R-/- mice (n = 3) and C57BL6 wildtype mice (n = 7) under urethane anaesthesia after injecting [125I]SD7015 intravenously or intraperitoneally. The Brookhaven Laboratory mouse MRI atlas was fused to the SPECT/CT images by using a combination of rigid and non-rigid algorithms in the Mediso Fusion™ (Mediso, Budapest, Hungary) and VivoQuant (inviCRO, Boston, MA, USA) softwares. Phosphor imager plate autoradiography (ARG) was performed on 4 μm-thin cryostat sections of the excised brains. %SUV was 8.6 ± 3.6 (average ± SD) in CB1R-/- mice and 22.1 ± 12.4 in wildtype mice between 2 and 4 h after injection (p < 0.05). ARG of identically taken sections from wildtype mouse brain showed moderate radioactivity uptake when compared with the in vivo images, with a clear difference between grey matter and white matter, whereas ARG in CB1R(-/-) mice showed practically no radioactivity uptake. [125I]SD7015 enters the mouse brain in sufficient amount to enable SPECT imaging. Brain radioactivity distribution largely coincides with that of the known CB1R expression pattern in rodent brain. We conclude that [125I]SD7015 should be a useful SPECT radioligand for

  7. In vivo SPECT and ex vivo autoradiographic brain imaging of the novel selective CB1 receptor antagonist radioligand [125I]SD7015 in CB1 knock-out and wildtype mouse.

    PubMed

    Máthé, Domokos; Horváth, Ildikó; Szigeti, Krisztián; Donohue, Sean R; Pike, Victor W; Jia, Zisheng; Ledent, Catherine; Palkovits, Miklós; Freund, Tamás F; Halldin, Christer; Gulyás, Balázs

    2013-02-01

    We aimed to evaluate the novel high-affinity and relatively lipophilic CB(1) receptor (CB(1)R) antagonist radioligand [(125)I]SD7015 for SPECT imaging of CB(1)Rs in vivo using the multiplexed multipinhole dedicated small animal SPECT/CT system, NanoSPECT/CT(PLUS) (Mediso, Budapest, Hungary), in knock-out CB(1) receptor knock-out (CB(1)R-/-) and wildtype mice. In order to exclude possible differences in cerebral blood flow between the two types of animals, HMPAO SPECT scans were performed, whereas in order to confirm the brain uptake differences of the radioligand between knock-out mice and wildtype mice, in vivo scans were complemented with ex vivo autoradiographic measurements using the brains of the same animals. With SPECT/CT imaging, we measured the brain uptake of radioactivity, using %SUV (% standardised uptake values) in CB(1)R-/- mice (n=3) and C57BL6 wildtype mice (n=7) under urethane anaesthesia after injecting [(125)I]SD7015 intravenously or intraperitoneally. The Brookhaven Laboratory mouse MRI atlas was fused to the SPECT/CT images by using a combination of rigid and non-rigid algorithms in the Mediso Fusion™ (Mediso, Budapest, Hungary) and VivoQuant (inviCRO, Boston, MA, USA) softwares. Phosphor imager plate autoradiography (ARG) was performed on 4 μm-thin cryostat sections of the excised brains. %SUV was 8.6±3.6 (average±SD) in CB(1)R-/- mice and 22.1±12.4 in wildtype mice between 2 and 4 h after injection (p<0.05). ARG of identically taken sections from wildtype mouse brain showed moderate radioactivity uptake when compared with the in vivo images, with a clear difference between grey matter and white matter, whereas ARG in CB(1)R(-/-) mice showed practically no radioactivity uptake. [(125)I]SD7015 enters the mouse brain in sufficient amount to enable SPECT imaging. Brain radioactivity distribution largely coincides with that of the known CB(1)R expression pattern in rodent brain. We conclude that [(125)I]SD7015 should be a useful SPECT

  8. Lisburne Group (Mississippian-Lower Permian) petrography, paragenesis, and hydrocarbon potential, central Brooks Range, Alaska

    SciTech Connect

    Krutak, P.R.

    1989-03-01

    Subsurface Lisburne Group (Wahoo) rocks at Prudhoe Bay-Kuparuk fields produce 2 million bbl of oil/day and contain 2-3 billion bbl of oil in place. Lisburne reservoirs are early diagenetic dolomites encased in thick platform carbonates. Petrographic and geochemical study of 264 samples from eight newly discovered surface Lisburne sections comprising 4568 ft of strata in the Central Brooks Range provide new data concerning paragenesis and hydrocarbon potential of Lisburne facies farther west. A generalized paragenetic sequence for Lisburne equivalents of this region is (1) initial carbonate skeletal growth (both aragonite and calcite) during the Carboniferous, (2) subsequent recrystallization and inversion of aragonite to calcite, the change to calcite proceeding throughout late Paleozoic and Permian-Triassic time, (3) dolomitization in the Middle and Late Carboniferous, (4) chertification and silicification, postdating slightly or overlapping dolomitization, (5) development of porosity (moldic, intracrystal, etc.) in the middle to late Mesozoic, (6) formation of fracture porosity concurrent with the Brooks Range orogeny during Middle Jurassic-Cretaceous time, (7) oil generation, migration, and emplacement in Late Cretaceous-Tertiary time. Lisburne dolomites from the Central Brooks Range bear heavy hydrocarbons. Rock-Eval pyrolysis indicates part of the section is in the oil window and near the peak wet-gas generation zone. Shale samples from this region display thermal alteration indices and vitrinite reflectance values near the oil floor and also indicate potential for sourcing dry gas. Conodont color alteration indices show part of the Lisburn could produce dry gas.

  9. Devonian-Mississippian carbonate sequence in the Maiyumerak Mountains, western Brooks Range, Alaska

    SciTech Connect

    Dumoulin, J.A. ); Harris, A.G. )

    1990-05-01

    Essentially continuous, dominantly carbonate sedimentation occurred from at least the Early Devonian through the Mississippian in the area that is now the Maiyumerak Mountains, western Brooks Range. This succession is in striking contrast to Paleozoic sequences in the eastern Brooks Range and in the subsurface across northern Alaska, where uppermost Devonian-Mississippian clastic and Carboniferous carbonates unconformably overlie Proterozoic or lower Paleozoic metasedimentary or sedimentary rocks. Conodonts obtained throughout the Maiyumerak Mountains sequence indicate that any hiatus is less than a stage in duration, and there is no apparent physical evidence of unconformity within the succession. The sequence is best exposed northwest of the Eli River, where Emsian-Eifelian dolostones (Baird Group) are conformably overlain by Kinderhookian-Osagian sandy limestones (Utukok Formation) and Osagian-Chesterian fossiliferous limestones (Kogruk Formation) of the Lisburne Group. Conodont species assemblages and sedimentary structures indicate deposition in a range of shallow-water shelf environments. The sequence extends at least 30 km, from the Noatak Quadrangle northeast into the Baird Mountains Quadrangle; its easternmost extent has not been definitively determined. The Ellesmerian orogeny, thought to have produced the extensive middle Paleozoic unconformity seen through much of northern Alaska apparently had little effect on this western Brooks Range sedimentary succession.

  10. Growth rate differences between resident native brook trout and non-native brown trout

    USGS Publications Warehouse

    Carlson, S.M.; Hendry, A.P.; Letcher, B.H.

    2007-01-01

    Between species and across season variation in growth was examined by tagging and recapturing individual brook trout Salvelinus fontinalis and brown trout Salmo trutta across seasons in a small stream (West Brook, Massachusetts, U.S.A.). Detailed information on body size and growth are presented to (1) test whether the two species differed in growth within seasons and (2) characterize the seasonal growth patterns for two age classes of each species. Growth differed between species in nearly half of the season- and age-specific comparisons. When growth differed, non-native brown trout grew faster than native brook trout in all but one comparison. Moreover, species differences were most pronounced when overall growth was high during the spring and early summer. These growth differences resulted in size asymmetries that were sustained over the duration of the study. A literature survey also indicated that non-native salmonids typically grow faster than native salmonids when the two occur in sympatry. Taken together, these results suggest that differences in growth are not uncommon for coexisting native and non-native salmonids. ?? 2007 The Authors.

  11. Facies comparison of autochthonous and allochthonous Permian and Triassic units, north-central Brooks Range, Alaska

    SciTech Connect

    Adams, K.E.

    1985-04-01

    Eight stratigraphic sections of Permian and Triassic rocks have been studied over a 30 km by 150 km area in the Endicott and Philip Smith Mountains of the central Brooks Range. Six of the sections are located on the Endicott Mountains allochthon, and the remaining two are parautochthonous columns in the Mount Doonerak area. The sections record a facies transition between the autochthonous Sadlerochit Group and Shublik Formation of the northeastern Brooks Range and the characteristically siliceous rocks of the allochthonous Siksikpuk and Otuk formations of the western Brooks Range. Laterally continuous and bioturbated beds of fine-grained sandstone, siltstone, and shale dominantly compose the Permian sequence, whereas the Triassic rocks consist of black shales, thin rhythmically bedded siliceous mudstones, and fossiliferous limestones. When the allochthonous sections are restored to a position south of the Mount Doonerak area, a general shallowing trend from southwest to northwest becomes evident within the reconstructed marine basin. To the south and west, the Permian sediments show a marked increase in silica content, with the occurrence of barite and a corresponding decrease in the thickness of the basal, coarser grained clastics. The Triassic formations also document an increase in silica and the presence of barite to the south and west, while becoming significantly sooty and phosphatic to the north and east. Ongoing petrographic and micropaleontologic studies of the field data will clarify these general paleogeographic relationships.

  12. Spatial and temporal Brook Trout density dynamics: Implications for conservation, management, and monitoring

    USGS Publications Warehouse

    Wagner, Tyler; Jefferson T. Deweber,; Jason Detar,; Kristine, David; John A. Sweka,

    2014-01-01

    Many potential stressors to aquatic environments operate over large spatial scales, prompting the need to assess and monitor both site-specific and regional dynamics of fish populations. We used hierarchical Bayesian models to evaluate the spatial and temporal variability in density and capture probability of age-1 and older Brook Trout Salvelinus fontinalis from three-pass removal data collected at 291 sites over a 37-year time period (1975–2011) in Pennsylvania streams. There was high between-year variability in density, with annual posterior means ranging from 2.1 to 10.2 fish/100 m2; however, there was no significant long-term linear trend. Brook Trout density was positively correlated with elevation and negatively correlated with percent developed land use in the network catchment. Probability of capture did not vary substantially across sites or years but was negatively correlated with mean stream width. Because of the low spatiotemporal variation in capture probability and a strong correlation between first-pass CPUE (catch/min) and three-pass removal density estimates, the use of an abundance index based on first-pass CPUE could represent a cost-effective alternative to conducting multiple-pass removal sampling for some Brook Trout monitoring and assessment objectives. Single-pass indices may be particularly relevant for monitoring objectives that do not require precise site-specific estimates, such as regional monitoring programs that are designed to detect long-term linear trends in density.

  13. Test beam results of Silicon Drift Detector prototypes for the ALICE experiment

    NASA Astrophysics Data System (ADS)

    Nouais, D.; Bonvicini, V.; Busso, L.; Cerello, P.; Giubellino, P.; Gregorio, A.; Hernández-Ontoya, R.; Idzik, M.; Kolojvari, A.; Mazza, G.; Montano, L. M.; Nilsen, B. S.; Petta, C.; Randazzo, N.; Rashevsky, A.; Reito, S.; Rivetti, A.; Tosello, F.; Trzaska, W. H.; Vacchi, A.; Alice Collaboration

    1999-08-01

    We report preliminary beam test results of linear Silicon Draft Detector prototypes for the ALICE experiment. Linearity, resolution, charge transport and collection, and efficiency have been studied using a minimum ionizing particle beam for a very large area detector prototype read out with the OLA preamplifier/shaper and for another detector read out using a new transimpedance amplifier with a non linear response.

  14. Alice in Computerland: Using the Internet as a Resource for Teaching Reading.

    ERIC Educational Resources Information Center

    Fresch, Mary Jo

    1999-01-01

    Discusses numerous valuable resources on the Internet that are useful for teaching reading, including sites with: information on science and history; all of Grimm's fairy tales; and "Alice in Wonderland." Notes good search engines and several exciting literacy-related sites. (SR)

  15. Literary and Visual Literacy for All: A Fourth-Grade Study of "Alice in Wonderland."

    ERIC Educational Resources Information Center

    Strangman, Nicole

    2003-01-01

    Interviews Monica Edinger, a fourth-grade teacher who strives to foster a love of literature in her classroom by reading "Alice in Wonderland" aloud to her students. Describes the rest of this project, which includes a close study of the book's illustrators and culminates in a student-produced Toy Theater production of the book, which is digitally…

  16. Assimilating Immigrants through Drama: The Social Politics of Alice Minnie Herts and Lillian Wald.

    ERIC Educational Resources Information Center

    Tuite, Patrick

    1998-01-01

    Looks at the differing production choices and dramatic methods endorsed by two settlement workers, Alice Minnie Hets and Lillian Wald, as witnessed in the opening productions of their settlement houses, where the dramatic arts were among the tools used by social workers to help fledging citizens adopt American ways. (SR)

  17. "Alice in wonderland" syndrome: a manifestation of infectious mononucleosis in children.

    PubMed

    Lahat, E; Eshel, G; Arlazoroff, A

    1991-01-01

    The association between "Alice in Wonderland" Syndrome (AWS) and infectious mononucleosis (IM) has been previously described in three patients.We describe two additional cases in children, where in one case, the visual symptoms of AWS appeared during the course of active IM and in the second, 2 weeks following a clinically mild, but serologically proven attack. PMID:24487499

  18. Functional MRI of a child with Alice in Wonderland syndrome during an episode of micropsia

    PubMed Central

    Brumm, Kathleen; Walenski, Matthew; Haist, Frank; Robbins, Shira L.; Granet, David B.; Love, Tracy

    2010-01-01

    Background Alice in Wonderland syndrome is a perceptual disorder involving brief, transient episodes of visual distortions (metamorphopsia) and can occur in conjunction with certain viral infections. We used functional magnetic resonance imaging to examine visual processing in a 12-year-old boy with viral-onset Alice in Wonderland syndrome during an episode of micropsia (reduction in the perceived size of a form). Methods Functional magnetic resonance imaging was conducted in response to a passive viewing task (reversing checkerboard) and an active viewing task (line-length decisions in the context of the Ponzo illusion). Results In both tasks, the child with Alice in Wonderland syndrome showed reduced activation in primary and extrastriate visual cortical regions but increased activation in parietal lobe cortical regions as compared to a matched control participant. Conclusions The active experience of micropsia in viral-onset Alice in Wonderland syndrome reflects aberrant activity in primary and extrastriate visual cortical regions as well as parietal cortices. The disparate patterns of activity in these regions are discussed in detail. PMID:20598927

  19. A Linguistic Analysis of Rhetorical Strategies in Selected Narratives of Alice Walker

    ERIC Educational Resources Information Center

    Matunda, Robert Stephen Mokaya

    2009-01-01

    The objective of this investigation was to analyze rhetorical strategies of Alice Walker in four narratives, namely, "The Color Purple, In Search of Our Mother's Gardens, Possessing the Secret of Joy, and Now Is the Time To Open Your Heart". As such, this study helps to expand the body of investigation relating linguistics to literature and medium…

  20. Alice Walker in the Classroom: "Living by the Word." The NCTE High School Literature Series.

    ERIC Educational Resources Information Center

    Jago, Carol

    This small book is a handy guide for bringing the work of author Alice Walker into the classroom. It includes biographical information, ideas for literature circles using Walker's short stories, sample writing lessons using Walker's poems, suggestions for teaching "The Color Purple," and a wealth of resources for further investigation of Alice…

  1. Writing a Rationale for a Controversial Common Reading Book: Alice Walker's "The Color Purple."

    ERIC Educational Resources Information Center

    Worthington, Pepper

    1985-01-01

    Offers a rationale that can be used to defend the assignment of Alice Walker's controversial novel for class reading. Indicates four issues that might evoke calls for censorship: (1) subject matter, (2) vocabulary, (3) grammar, and (4) the epistolary form of the work. (RBW)

  2. Black Matrilineage: The Case of Alice Walker and Zora Neale Hurston.

    ERIC Educational Resources Information Center

    Sadoff, Diane F.

    1985-01-01

    Discusses the relationship of the Black contemporary author, Alice Walker, to folklorist Zora Neale Hurston and presents a clarification of the relationship of gender and race in a revised theory of literary influence. Argues that Black women authors sometimes misread literary forbears in order to discover and express a positive matrilineage…

  3. Effects of Using Alice and Scratch in an Introductory Programming Course for Corrective Instruction

    ERIC Educational Resources Information Center

    Chang, Chih-Kai

    2014-01-01

    Scratch, a visual programming language, was used in many studies in computer science education. Most of them reported positive results by integrating Scratch into K-12 computer courses. However, the object-oriented concept, one of the important computational thinking skills, is not represented well in Scratch. Alice, another visual programming…

  4. "Spend Your Whole Life Learning and Giving!": An Interview with Alice Sterling Honig

    ERIC Educational Resources Information Center

    Early Childhood Research & Practice, 2009

    2009-01-01

    This paper presents an interview with Dr. Alice Sterling Honig which took place in Syracuse, New York, in May 2009. Michele Jachim Barrett of Syracuse University conducted the interview using questions prepared by the editors of "ECRP." Dr. Honig is currently Professor Emerita at Syracuse University. Her work in early childhood development, care,…

  5. A design study for the upgraded ALICE O2 computing facility

    NASA Astrophysics Data System (ADS)

    Richter, Matthias

    2015-12-01

    An upgrade of the ALICE detector is currently prepared for the Run 3 period of the Large Hadron Collider (LHC) at CERN starting in 2020. The physics topics under study by ALICE during this period will require the inspection of all collisions at a rate of 50 kHz for minimum bias Pb-Pb and 200 kHz for pp and p-Pb collisions in order to extract physics signals embedded into a large background. The upgraded ALICE detector will produce more than 1 TByte/s of data. Both collision and data rate impose new challenges onto the detector readout and compute system. Some detectors will not use a triggered readout, which will require a continuous processing of the detector data. The challenging requirements will be met by a combined online and offline facility developed and managed by the ALICE O2 project. The combined facility will accommodate the necessary substantial increase of data taking rate. In this paper we present first results of a prototype with estimates for scalability and feasibility for a full scale system.

  6. Centrality Dependence of Particle Production in p-A collisions measured by ALICE

    NASA Astrophysics Data System (ADS)

    Toia, Alberica

    2016-01-01

    We present the centrality dependence of particle production in p-Pb collisions at √SNN = 5.02 TeV measured by the ALICE experiment, including the pseudo-rapidity and transverse momentum spectra, with a special emphasis on the event classification in centrality classes and its implications for the interpretation of the nuclear effects.

  7. Comet 67P/Churyumov-Gerasimenko’s Increasing Atomic Sulfur Abundance Observed by Rosetta Alice

    NASA Astrophysics Data System (ADS)

    Feaga, Lori M.; Feldman, Paul D.; A'Hearn, Michael F.; Bertaux, Jean-Loup; Keeney, Brian A.; Knight, Matthew M.; Noonan, John; Parker, Joel Wm.; Schindhelm, Eric; Steffl, Andrew J.; Stern, S. Alan; Vervack, Ronald J.; Weaver, Harold A.

    2015-11-01

    Alice, NASA’s lightweight and low-power far-ultraviolet (FUV) imaging spectrograph onboard ESA’s comet orbiting spacecraft Rosetta (Stern et al. 2007), is continuing its characterization of the nucleus and coma of the Jupiter family comet 67P/Churyumov-Gerasimenko (C-G) as it approaches and recedes from perihelion. With a spectral range from 700-2050 Å, Alice has the ability to detect the atomic sulfur multiplets at 1429 Å, 1479 Å and 1814 Å. Sulfur in C-G’s coma is most likely a dissociation product of CS2 and OCS, but could also be produced after a secondary dissociation from H2S and SO2, all molecular species measured in C-G’s coma by ROSINA, the Rosetta orbiter’s mass spectrometer.Due to low abundances, Alice did not detect sulfur atoms at C-G until May 2015 when the comet was at ~1.7 AU and still 3 months from perihelion. Now, sulfur is ubiquitous in Alice observations above the limb of the nucleus. There is evidence that there is not a strong dependence of the abundance of sulfur on the distance from the nucleus in the pre-perihelion radial profiles of the gas, which may be indicative of the parent molecule and its distribution. This will be investigated further. The evolution of the presence of the three sulfur multiplets, their relative abundances and excitation processes, and behavior pre- and post-perihelion will be presented.

  8. The Hybrid Integrated Circuit of the ALICE Inner Tracking System upgrade

    NASA Astrophysics Data System (ADS)

    Fiorenza, G.; Manzari, V.; Pastore, C.; Valentino, V.

    2016-01-01

    The upgrade of the Inner Tracking System scheduled during the second long shutdown is an important milestone of the ALICE upgrade and it will provide a high improvement of its performances. In this contribution the smallest operator unit of the detector, the Hybrid Integrated Circuits, is presented.

  9. Advanced image reconstruction and visualization algorithms for CERN ALICE high energy physics experiment

    NASA Astrophysics Data System (ADS)

    Myrcha, Julian; Rokita, Przemysław

    2015-09-01

    Visual data stereoscopic 3D reconstruction is an important challenge in the LHC ALICE detector experiment. Stereoscopic visualization of 3D data is also an important subject of photonics in general. In this paper we have proposed several solutions enabling effective perception based stereoscopic visualization of data provided by detectors in high energy physics experiments.

  10. "Princess Alice Is Watching You": Children's Belief in an Invisible Person Inhibits Cheating

    ERIC Educational Resources Information Center

    Piazza, Jared; Bering, Jesse M.; Ingram, Gordon

    2011-01-01

    Two child groups (5-6 and 8-9 years of age) participated in a challenging rule-following task while they were (a) told that they were in the presence of a watchful invisible person ("Princess Alice"), (b) observed by a real adult, or (c) unsupervised. Children were covertly videotaped performing the task in the experimenter's absence. Older…

  11. Influence of Alice 3: Reducing the Hurdles to Success in a CS1 Programming Course

    ERIC Educational Resources Information Center

    Daly, Tebring

    2013-01-01

    Learning the syntax, semantics, and concepts behind software engineering can be a challenging task for many individuals. This paper examines the Alice 3 software, a three-dimensional visual environment for teaching programming concepts, to determine if it is an effective tool for improving student achievement, raising self-efficacy, and engaging…

  12. Level II scour analysis for Bridge 10 (NORWTH00120010) Town Highway 012 Bloody Brook, Norwich, Vermont

    USGS Publications Warehouse

    Ayotte, Joseph D.

    1996-01-01

    This report provides the results of a detailed Level II analysis of scour potential at structure NORWTH00120010 on town highway 12 crossing Bloody Brook, Norwich, Vermont (figures 1–8). A Level II study is a basic engineering analysis of the site, including a quantitative analysis of stream stability and scour (U.S. Department of Transportation, 1993). A Level I study is included in Appendix E of this report. A Level I study provides a qualitative geomorphic characterization of the study site. Information on the bridge, available from VTAOT files, was compiled prior to conducting the Level I and Level II analyses and can be found in Appendix D. The site is in the New England Upland physiographic province in east-central Vermont. The 8.98-mi2 drainage area is in a predominantly rural and forested basin. In the vicinity of the study site, the left bank upstream and the left and right banks downstream are forested. The immediate right bank upstream is covered by shrub and brush with pasture on the overbank. Town Highway 12 runs along the valley of Bloody Brook; however, at structure NORWTH00120010 the road crosses Bloody Brook at a 90-degree angle. In the study area, Bloody Brook has a sinuous channel with a slope of approximately 0.014 ft/ft, an average channel top width of 41 ft and an average channel depth of 3 ft. The predominant channel bed materials are gravel and cobble (D50 is 51.0 mm or 0.167 ft). The geomorphic assessment at the time of the Level I site visit on October 31, 1994, indicated that the reach was unstable. The town highway 12 crossing of Bloody Brook is a 34-ft-long, two-lane bridge consisting of one 30-foot clear span (Vermont Agency of Transportation, written commun., July 29, 1994). The bridge is supported by vertical, concrete abutments with wingwalls. The right abutment is protected by sparse type-2 stone fill (less than 24 inches diameter). The channel is skewed 0 degrees to the opening and the opening-skew-to-roadway is 0 degrees

  13. HadISD: a quality-controlled global synoptic report database for selected variables at long-term stations from 1973-2011

    NASA Astrophysics Data System (ADS)

    Dunn, R. J. H.; Willett, K. M.; Thorne, P. W.; Woolley, E. V.; Durre, I.; Dai, A.; Parker, D. E.; Vose, R. S.

    2012-10-01

    This paper describes the creation of HadISD: an automatically quality-controlled synoptic resolution dataset of temperature, dewpoint temperature, sea-level pressure, wind speed, wind direction and cloud cover from global weather stations for 1973-2011. The full dataset consists of over 6000 stations, with 3427 long-term stations deemed to have sufficient sampling and quality for climate applications requiring sub-daily resolution. As with other surface datasets, coverage is heavily skewed towards Northern Hemisphere mid-latitudes. The dataset is constructed from a large pre-existing ASCII flatfile data bank that represents over a decade of substantial effort at data retrieval, reformatting and provision. These raw data have had varying levels of quality control applied to them by individual data providers. The work proceeded in several steps: merging stations with multiple reporting identifiers; reformatting to netCDF; quality control; and then filtering to form a final dataset. Particular attention has been paid to maintaining true extreme values where possible within an automated, objective process. Detailed validation has been performed on a subset of global stations and also on UK data using known extreme events to help finalise the QC tests. Further validation was performed on a selection of extreme events world-wide (Hurricane Katrina in 2005, the cold snap in Alaska in 1989 and heat waves in SE Australia in 2009). Some very initial analyses are performed to illustrate some of the types of problems to which the final data could be applied. Although the filtering has removed the poorest station records, no attempt has been made to homogenise the data thus far, due to the complexity of retaining the true distribution of high-resolution data when applying adjustments. Hence non-climatic, time-varying errors may still exist in many of the individual station records and care is needed in inferring long-term trends from these data. This dataset will allow the

  14. HadISD: a quality controlled global synoptic report database for selected variables at long-term stations from 1973-2010

    NASA Astrophysics Data System (ADS)

    Dunn, R. J. H.; Willett, K. M.; Thorne, P. W.; Woolley, E. V.; Durre, I.; Dai, A.; Parker, D. E.; Vose, R. S.

    2012-05-01

    This paper describes the creation of HadISD; an automatically quality-controlled synoptic resolution dataset of temperature, dewpoint temperature, sea-level pressure, wind speed, wind direction and cloud cover from global weather stations for 1973-2010. The full dataset consists of over 6000 stations, with 3375 long-term stations deemed to have sufficient sampling and quality for climate applications requiring sub-daily resolution. As with other surface datasets, coverage is heavily skewed towards Northern Hemisphere mid-latitudes. The dataset is constructed from a large pre-existing ASCII flatfile data bank that represents over a decade of substantial effort at data retrieval, reformatting and provision. The work proceeded in several steps: merging stations with multiple reporting identifiers; reformatting to netcdf; quality control; and then filtering to form a final dataset. Particular attention has been paid to maintaining true extreme values where possible within an automated objective process. Detailed validation has been performed on a subset of global stations and also on UK data using known extreme events to help finalise the QC tests. Further validation was performed on a selection of extreme events world-wide (Hurricane Katrina in 2005, the cold snap in Alaska in 1989 and heat waves in SE Australia in 2009). Some very initial analyses are performed to illustrate some of the types of problems to which the final data could be applied. Although the filtering has removed the poorest station records, no attempt has been made to homogenise the data thus far, due to the complexity of retaining the true distribution of high-resolution data when applying adjustments. Hence non-climatic, time-varying errors may still exist in many of the individual station records and care is needed in inferring long-term trends from these data. This dataset will allow the study of high frequency variations of temperature, pressure and humidity on a global basis over the last four

  15. Austin ISD. Integrated Lesson Plans.

    ERIC Educational Resources Information Center

    East Texas State Univ., Commerce. Educational Development and Training Center.

    This packet contains 14 lesson plans for integrated academic and vocational education courses. Lesson plans for the following courses are included: integrated physics and principles of technology; algebra and principles of technology; principles of technology, language arts, and economics; physics and industrial electronics; physics and…

  16. Greenville ISD. Integrated Lesson Plans.

    ERIC Educational Resources Information Center

    East Texas State Univ., Commerce. Educational Development and Training Center.

    This packet contains nine lesson plans for integrated academic and vocational education courses. Lesson plans for the following courses are included: industrial technology, automotive technology, English, mathematical applications, science, home economics, and mathematics. Some of the topics covered are as follows: mechanical drawing, automobile…

  17. Mansfield ISD. Integrated Lesson Plans.

    ERIC Educational Resources Information Center

    East Texas State Univ., Commerce. Educational Development and Training Center.

    This packet contains 27 lesson plans for integrated academic and vocational education courses. Lesson plans for the following courses are included: horticulture, algebra, physical science, general mechanical repair, foods and nutrition, home economics, and microcomputer applications. Some of the topics covered are as follows: seed germination,…

  18. Hydrogeology and ground-water flow, fractured Mesozoic structural-basin rocks, Stony Brook, Beden Brook, and Jacobs Creek drainage basins, west-central New Jersey

    USGS Publications Warehouse

    Lewis, Jean C.; Jacobsen, Eric

    1995-01-01

    This study was undertaken to characterize ground- water flow in the Stony Brook, Beden Brook, and Jacobs Creek drainage basins in west-central New Jersey. The 89-square-mile study area is underlain by dipping beds of fractured siltstone, shale, and sandstone and by massive diabase sills. In all of the rocks, the density of interconnected fractures decreases with depth. A major fault extends through the study area, and rocks on both sides of the fault are extensively fractured. The average annual rates of precipitation and ground-water recharge in the study area are 45.07 inches and 8.58 inches, respectively. The rate of recharge to diabase rocks is about one-half the rate of recharge to other rocks. Part of the surface runoff from diabase rocks enters the ground-water system where it encounters more permeable rocks. Most ground water in the study area follows short, shallow flow paths. A three- dimensional finite-difference model of ground-water flow was developed to test hypotheses concerning geologic features that control ground-water flow in the study area. The decrease in the density of interconnected fractures with depth was represented by dividing the model into two layers with different hydraulic conductivity. The pinching out of water- bearing beds in the dip direction at land surface and at depth was simulated as a lower hydraulic conductivity in the dip direction than in the strike direction. This model can be used to analyze ground-water flow if the area of interest is more than about 0.5 square mile.

  19. Unraveling the Timing of Fluid Migration and Trap Formation in the Brooks Range Foothills: A Key to Discovering Hydrocarbons

    SciTech Connect

    Catherine L. Hanks

    2008-12-31

    Naturally occurring fractures can play a key role in the evolution and producibility of a hydrocarbon accumulation. Understanding the evolution of fractures in the Brooks Range/Colville basin system of northern Alaska is critical to developing a better working model of the hydrocarbon potential of the region. This study addressed this problem by collecting detailed and regional data on fracture distribution and character, structural geometry, temperature, the timing of deformation along the Brooks Range rangefront and adjacent parts of the Colville basin, and the in situ stress distribution within the Colville basin. This new and existing data then were used to develop a model of how fractures evolved in northern Alaska, both spatially and temporally. The results of the study indicate that fractures formed episodically throughout the evolution of northern Alaska, due to a variety of mechanisms. Four distinct fracture sets were observed. The earliest fractures formed in deep parts of the Colville basin and in the underlying Ellesmerian sequence rocks as these rocks experienced compression associated with the growing Brooks Range fold-and-thrust belt. The orientation of these deep basin fractures was controlled by the maximum in situ horizontal stress in the basin at the time of their formation, which was perpendicular to the active Brooks Range thrust front. This orientation stayed consistently NS-striking for most of the early history of the Brooks Range and Colville basin, but changed to NW-striking with the development of the northeastern Brooks Range during the early Tertiary. Subsequent incorporation of these rocks into the fold-and-thrust belt resulted in overprinting of these deep basin fractures by fractures caused by thrusting and related folding. The youngest fractures developed as rocks were uplifted and exposed. While this general order of fracturing remains consistent across the Brooks Range and adjacent Colville basin, the absolute age at any one

  20. Summer movements of sub-adult brook trout, landlocked Atlantic salmon, and smallmouth bass in the Rapid River, Maine

    USGS Publications Warehouse

    Jackson, Casey A. L.; Zydlewski, Joseph

    2009-01-01

    Summer movement patterns and spatial overlap of native sub-adult brook trout (Salvelinus fontinalis), non-native landlocked Atlantic salmon (Salmo salar), and non-native smallmouth bass (Micropterus dolomieu) in the Rapid River, Maine, were investigated with radio telemetry in 2005. Fishes were captured by angling, surgically implanted with radio transmitters, and tracked actively from June through September. Most brook trout (96%) and landlocked salmon (72%) displayed long distance movements (>1 km) to open water bodies (28 June to 4 July) followed by periods of time spent in presumed thermal refigia (5 July to 16 September). Summer water temperature rose above 25 °C, near the reported lethal limits for these coldwater species. In contrast, the majority of smallmouth bass (68%), a warrnwater species, did not make long distance movements from areas of initial capture, remaining in mainstem sections of the river (28 June to 16 September). Spatial overlap of smallmouth bass and brook trout in the summer is unlikely because brook trout presumably move to thermal rehgia during this time. However, interspecific competition between brook trout and landlocked salmon may occur since they select similar habitats June through September.

  1. Environmental planning as a tool for economic development: The black brook watershed experience

    SciTech Connect

    Ryner, P.C.; Heller, G.B.

    1995-12-01

    The Keene, New Hampshire Planning Department has attempted to use environmental planning as a tool to facilitate industrial development of the Black Brook Watershed. The City has established detailed modeling of drainage, floodplains and groundwater, and has placed that information on accurate computer-based maps. When provided to developers at the beginning of the development process, this environmental information expidites design and permitting while also improving the likelihood of protecting sensitive environmental areas. Starting in 1987 as part of a Master Plan revision process, the Planning Department decided to concentrate on the Black Brook Watershed in northwestern Keene as a target area for a new approach to economic development and environmental protection. The entire watershed was chosen as the boundary for this study area and detailed studies were conducted. During this effort the City formulated a new Economic Development Master Plan which called for the creation of approximately 300 acres of new industrial development within the next ten years. The Black Brook basin was identified as the preferred site. Because of pro-active environmental planning, the City is now able to work in active, cooperative partnership with the private sector in the development of this area. It is clear from this first specific development project that the project development and permitting process will be shortened by at least 60 days, and a minimum of $5,000 to $10,000 in preliminary site information costs will be saved. The availability of good information on wetlands and floodplains has already had a dramatic impact upon proposed site design and has achieved the desired objective of avoiding these sensitive areas whenever possible. The City is now working on the design of an Industrial Design and Permitting System which will be applied to the entire City, based upon what has been learned from this effort.

  2. New orbit recalculations of comet C/1890 F1 Brooks and its dynamical evolution

    NASA Astrophysics Data System (ADS)

    Królikowska, Małgorzata; Dybczyński, Piotr A.

    2016-08-01

    C/1890 F1 Brooks belongs to a group of 19 comets used by Jan Oort to support his famous hypothesis on the existence of a spherical cloud containing hundreds of billions of comets with orbits of semi-major axes between 50 000 and 150 000 au. Comet Brooks stands out from this group because of a long series of astrometric observations as well as a nearly 2-yr-long observational arc. Rich observational material makes this comet an ideal target for testing the rationality of an effort to recalculate astrometric positions on the basis of original (comet-star) measurements using modern star catalogues. This paper presents the results of such a new analysis based on two different methods: (i) automatic re-reduction based on cometary positions and the (comet-star) measurements and (ii) partially automatic re-reduction based on the contemporary data for the reference stars originally used. We show that both methods offer a significant reduction in the uncertainty of orbital elements. Based on the most preferred orbital solution, the dynamical evolution of comet Brooks during three consecutive perihelion passages is discussed. We conclude that C/1890 F1 is a dynamically old comet that passed the Sun at a distance below 5 au during its previous perihelion passage. Furthermore, its next perihelion passage will be a little closer than during the 1890-1892 apparition. C/1890 F1 is interesting also because it suffered extremely small planetary perturbations when it travelled through the planetary zone. Therefore, in the next passage through perihelion, it will once again be a comet from the Oort spike.

  3. Spatial structure of morphological and neutral genetic variation in Brook Trout

    USGS Publications Warehouse

    Kazyak, David C.; Hilderbrand, Robert H.; Keller, Stephen R.; Colaw, Mark C.; Holloway, Amanda E.; Morgan, Raymond P.; King, Timothy L.

    2015-01-01

    Brook Trout Salvelinus fontinalis exhibit exceptional levels of life history variation, remarkable genetic variability, and fine-scale population structure. In many cases, neighboring populations may be highly differentiated from one another to an extent that is comparable with species-level distinctions in other taxa. Although genetic samples have been collected from hundreds of populations and tens of thousands of individuals, little is known about whether differentiation at neutral markers reflects phenotypic differences among Brook Trout populations. We compared differentiation in morphology and neutral molecular markers among populations from four geographically proximate locations (all within 24 km) to examine how genetic diversity covaries with morphology. We found significant differences among and/or within streams for all three morphological axes examined and identified the source stream of many individuals based on morphology (52.3% classification efficiency). Although molecular and morphological differentiation among streams ranged considerably (mean pairwise FST: 0.023–0.264; pairwise PST: 0.000–0.339), the two measures were not significantly correlated. While in some cases morphological characters appear to have diverged to a greater extent than expected by neutral genetic drift, many traits were conserved to a greater extent than were neutral genetic markers. Thus, while Brook Trout exhibit fine-scale spatial patterns in both morphology and neutral genetic diversity, these types of biological variabilities are being structured by different ecological and evolutionary processes. The relative influences of genetic drift versus selection and phenotypic plasticity in shaping morphology appear to vary among populations occupying nearby streams.

  4. Drivers and evolution of episodic acidification at the Bear Brook Watershed in Maine, USA.

    PubMed

    Laudon, Hjalmar; Norton, Stephen A

    2010-12-01

    Despite decades of research about episodic acidification in many regions of the world, the understanding of what controls the transient changes in stream water chemistry occurring during rain and snow melt events is still limited. Here, we use 20 years of hydrological and stream chemical data from the paired watershed study at Bear Brook Watershed in Maine (BBWM), USA to improve the understanding of the effects of acid deposition on the causes, drivers, and evolution of episodic acidification. The long-term experimental study at BBWM includes 18 years of chemical treatment of the West Bear Brook (WB) watershed with (NH(4))(2)SO(4). East Bear Brook (EB) serves as reference. The treatment started in 1989 following a 2-year pretreatment period. We analyzed 212 hydrological episodes using an episode model that can separate and quantify individual drivers of the transient change in acid-neutralizing capacity (ANC) during hydrological events. The results suggest that 18 years of N and S addition have not affected the natural drivers of episodic acidification of base-cation dilution, marine sea salt episodes, or organic acidity during rain and snow melt events. The contribution of SO4(2-) to the ANC decline in WB has been increasing linearly since the beginning of watershed treatment, while the role of NO3- has remained relatively constant after an initial increase. This is contradictory to many previous shorter-term studies and illustrates the need for a more mechanistic understanding of the causes and drivers of episodic acidification during rain- and snow melt-driven hydrological events.

  5. Persistent mortality of brook trout in episodically acidified streams of the Southwestern Adirondack Mountains, New York

    USGS Publications Warehouse

    Baldigo, Barry P.; Lawrence, G.; Simonin, H.

    2007-01-01

    Water chemistry, discharge, and mortality of caged brook trout Salvelinus fontinalis were characterized in six headwater streams in the southwestern Adirondack Mountains of New York during spring 2001-2003. Results were compared with mortality recorded during similar tests during 1984-1985, 1988-1990, and 1997 to assess contemporary relations between stream acidification and brook trout mortality, the effects of exposure duration on mortality, and the effects of decreased rates of acidic deposition on water quality and fish mortality. Water quality and mortality of caged, young-of-the-year brook trout were evaluated during 30-d exposure periods from mid-April to late May during the most recent tests. In 2001-2003, mortality ranged from 0% to 100% and varied among streams and years, depending on the timing of toxicity tests in relation to the annual snowmelt and on the ability of each watershed to neutralize acids and prevent acutely toxic concentrations of inorganic monomeric aluminum (Alim) during high-flow events. Mortality rates in 2001-2003 tests were highly variable but similar to those observed during earlier tests. This similarity suggests that stream water quality in the southwestern Adirondack Mountains has not changed appreciably over the past 20 years. Concentrations of Alim greater than 2.0 and 4.0 ??mol/L were closely correlated with low and high mortality rates, respectively, and accounted for 83% of the variation in mortality. Two to four days of exposure to Alim concentrations greater than 4.0 ??mol/L resulted in 50-100% mortality. The extended periods (as long as 6 months) during which Alim concentrations exceeded 2.0 and 4.0 ??mol/L in one or more streams, combined with the low tolerance of many other fish species to acid and elevated Al concentrations, indicate a high potential for damage to fish communities in these and other poorly buffered streams of the Northeast. ?? Copyright by the American Fisheries Society 2007.

  6. Drivers and evolution of episodic acidification at the Bear Brook Watershed in Maine, USA.

    PubMed

    Laudon, Hjalmar; Norton, Stephen A

    2010-12-01

    Despite decades of research about episodic acidification in many regions of the world, the understanding of what controls the transient changes in stream water chemistry occurring during rain and snow melt events is still limited. Here, we use 20 years of hydrological and stream chemical data from the paired watershed study at Bear Brook Watershed in Maine (BBWM), USA to improve the understanding of the effects of acid deposition on the causes, drivers, and evolution of episodic acidification. The long-term experimental study at BBWM includes 18 years of chemical treatment of the West Bear Brook (WB) watershed with (NH(4))(2)SO(4). East Bear Brook (EB) serves as reference. The treatment started in 1989 following a 2-year pretreatment period. We analyzed 212 hydrological episodes using an episode model that can separate and quantify individual drivers of the transient change in acid-neutralizing capacity (ANC) during hydrological events. The results suggest that 18 years of N and S addition have not affected the natural drivers of episodic acidification of base-cation dilution, marine sea salt episodes, or organic acidity during rain and snow melt events. The contribution of SO4(2-) to the ANC decline in WB has been increasing linearly since the beginning of watershed treatment, while the role of NO3- has remained relatively constant after an initial increase. This is contradictory to many previous shorter-term studies and illustrates the need for a more mechanistic understanding of the causes and drivers of episodic acidification during rain- and snow melt-driven hydrological events. PMID:20535549

  7. J/{psi} measurements in 7 TeV p-p collisions with ALICE using EMCal-triggered events

    SciTech Connect

    Figueredo, M. A.; Collaboration: ALICE Collaboration

    2013-03-25

    J/{psi} measurements can be performed with the ALICE experiment through the dilepton decay into e{sup -}e{sup +} (for rapidity Double-Vertical-Line y Double-Vertical-Line <0.9) and {mu}{sup -}{mu}{sup +} (for rapidity -4.0ALICE physics program, since they provide baseline results to be compared with Pb-Pb, where one expects the production of the Quark Gluon Plasma (QGP). Moreover, these measurements are interesting per se because the mechanism of charmonium production in hadron interactions is not yet fully understood. The ALICE Eletromagnetic Calorimeter (EMCal) p{sub T} extends the range of J/{psi} measurements, since it provides electron/hadron discrimination for higher p{sub T} values in comparison to other electron PID techniques in ALICE. The EMCal can also provide fast triggers for events containing high energy electrons. In 2011, during proton-proton collisions at 7 TeV, the ALICE EMCal trigger was intensively used for event selection of showers above 4.8 GeV. In this work, some results from 2011 proton-proton collisions are presented, showing a J/{psi} measurement for transversal momentum above 6 GeV/c, due to a combination of the ALICE EMCal PID and trigger system.

  8. New cave species of Sinella Brook, 1882 from China (Collembola: Entomobryidae).

    PubMed

    Zhao, Lina; Zhang, Feng

    2016-01-01

    Springtails, especially entomobryids, are abundant in Karst faunas. Five new species of Sinella Brook are described here from caves in southern China: S. liuae sp. nov., S. hunanica sp. nov., S. tigris sp. nov., S. minuta sp. nov. and S. tiani sp. nov. A new record of Sinella sineocula Chen & Christiansen, is also recorded. These species differ in claw structure, chaetae on ventral side of the head, and body chaetotaxy. An updated key to cave species of Sinella from China is provided. PMID:27615947

  9. Evaluation of nuclear facility decommissioning projects: summary report. Plum Brook Reactor Facility

    SciTech Connect

    Doerge, D.H.; Miller, R.L.

    1984-02-01

    This document summarizes information concerning the decommissioning of the Plum Brook Reactor Facility, which was placed in a Nuclear Regulatory Commission (NRC) approved safe storage configuration. The data were placed in a computerized information retrieval/manipulation system which permits future utilization of this information in decommissioning of similar facilities. The information is presented both in computer output form and a manually assembled summarization. Complete cost data were not readily available and decommissioning activities did not in all cases conform with current criteria for the SAFSTOR decommissioning mode, therefore no cost comparisons were made.

  10. Tectonic evolution of the central Brooks Range mountain front: Evidence from the Atigun Gorge region

    USGS Publications Warehouse

    Mull, C.G.; Glenn, R.K.; Adams, K.E.

    1997-01-01

    Atigun Gorge, at the northern front of the eastern Endicott Mountains, contains well-exposed rocks of the upper part of the Endicott Mountains allochthon and rocks of the structurally higher Picnic Creek or Ipnavik River allochthon. These allochthons contain rocks as young as Early Cretaceous (Valanginian) and are separated by a nearly vertical fault zone that contains exotic blocks of Triassic and Jurassic chert and silicified mudstone. Siliceous rocks of this type are not present in the Endicott Mountains allochthon but are characteristic of the Picnic Creek, Ipnavik River, and some of the other allochthons that structurally overlie the Endicott Mountains allochthon in the central and western Brooks Range. These exotic blocks, therefore indicate that structurally higher rocks of either the Picnic Creek or Ipnavik River allochthon were emplaced during the Early Cretaceous and are preserved along the northern flank of the eastern Endicott Mountains. The deformed thickness of this higher allochthon in the subsurface north of the mountains is unknown but probably exceeds 2 kilometers. Similar relations are mapped east of Atigun Gorge in an area of structural transition from the eastern Endicott Mountains into the northern Philip Smith Mountains, which are formed by the parautochthonous North Slope stratigraphic assemblage. The allochthonous rocks at the mountain front are regionally unconformably overlain by proximal Lower Cretaceous (Albian) foredeep conglomerate at the southern flank of the Colville basin, but at Atigun Gorge, the base of these deposits is interpreted as a possible back thrust at a triangle zone. Conglomerate clasts in the foredeep deposits are dominantly chert, mafic igneous rock, and other lithologies characteristic of the Picnic Creek and Ipnavik River allochthons and scattered clasts from the Endicott Mountains allochthon. The conglomerates show that the chert-rich allochthonous rocks and the Endicott Mountains allochthon were emplaced in the

  11. Scientific explanation and ecological validity: a reply to Brooks and Baumeister.

    PubMed

    House, B J

    1977-05-01

    There are two different goals a researcher might have in studying behavior of retarded persons. One is to gain a scientific understanding of low intelligence as a subcategory of human intellectual functioning. The other is to develop practical techniques for prediction, control, and remediation of retardation in daily life. Brooks and Baumeister (1977) have confused the two and have advocated methods suitable for practical application to answer questions about the nature of retardation. They have done a disservice to the field in disparaging basic research.

  12. Familial multiple eccrine spiradenomas with cylindromatous features associated with epithelioma adenoides cysticum of Brooke.

    PubMed

    Berberian, B J; Sulica, V I; Kao, G F

    1990-07-01

    Four cases of rare familial multiple eccrine spiradenomas showing features of dermal cylindromas and associated with epithelioma adenoides cysticum of Brooke are reported. Skin biopsy specimens were obtained from three generations of this family and routine histochemical and immunoperoxidase stains were used. The eldest affected family member had multiple disfiguring facial and scalp tumors, which precipitated episodes of depression. Unlike other cutaneous genetic disorders, such as neurofibromatosis and tuberous sclerosis, the cutaneous adnexal tumors occurring in these patients continue to erupt and grow during their lifetimes.

  13. Industrial cogeneration case study No. 2: American Cyanamid Chemical Company, Bound Brook, New Jersey

    SciTech Connect

    Not Available

    1980-01-01

    Within a project for evaluating the economics of cogeneration for industrial plants with an electrical capacity of 10,000 to 30,000 kW, the American Cyanamid plant at Bound Brook, NJ was selected for study. Built between 1915 and 1920 this power plant was converted in the 1960's from coal-fueling to oil and natural gas. Information is presented on the plant site, fuel usage, generation costs, comparative cost of purchasable electric power, equipment used, performance, and reliability and capital and maintenance costs. (LCL)

  14. A 2000 year varve-based climate record from the central Brooks Range, Alaska

    SciTech Connect

    Bird, B.W.; Abbott, M.B.; Finney, B.P.; Kutchko, Barbara

    2009-01-01

    Varved minerogenic sediments from glacial-fed Blue Lake, northern Alaska, are used to investigate late Holocene climate variability. Varve thickness measurements track summer temperature recorded at Atigun Pass, located 41 km east at a similar elevation (r2 = 0.31, P = 0.08). Results indicate that climate in the Brooks Range from 10 to 730 AD (varve year) was warm with precipitation inferred to be higher than during the twentieth century. The varve-temperature relationship for this period was likely compromised and not used in our temperature reconstruction because the glacier was greatly reduced, or absent, exposing sub-glacial sediments to erosion from enhanced precipitation.

  15. 75 FR 3217 - J&T Hydro Company; H. Dean Brooks and W. Bruce Cox; Notice of Application for Transfer of License...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-01-20

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF ENERGY Federal Energy Regulatory Commission J&T Hydro Company; H. Dean Brooks and W. Bruce Cox; Notice of Application... 30, 2009, J&T Hydro Company (transferor) and W. Dean Brooks, and H. Bruce Cox (transferees) filed...

  16. Landscape-scale evaluation of asymmetric interactions between Brown Trout and Brook Trout using two-species occupancy models

    USGS Publications Warehouse

    Wagner, Tyler; Jefferson T. Deweber,; Jason Detar,; John A. Sweka,

    2013-01-01

    Predicting the distribution of native stream fishes is fundamental to the management and conservation of many species. Modeling species distributions often consists of quantifying relationships between species occurrence and abundance data at known locations with environmental data at those locations. However, it is well documented that native stream fish distributions can be altered as a result of asymmetric interactions between dominant exotic and subordinate native species. For example, the naturalized exotic Brown Trout Salmo trutta has been identified as a threat to native Brook Trout Salvelinus fontinalis in the eastern United States. To evaluate large-scale patterns of co-occurrence and to quantify the potential effects of Brown Trout presence on Brook Trout occupancy, we used data from 624 stream sites to fit two-species occupancy models. These models assumed that asymmetric interactions occurred between the two species. In addition, we examined natural and anthropogenic landscape characteristics we hypothesized would be important predictors of occurrence of both species. Estimated occupancy for Brook Trout, from a co-occurrence model with no landscape covariates, at sites with Brown Trout present was substantially lower than sites where Brown Trout were absent. We also observed opposing patterns for Brook and Brown Trout occurrence in relation to percentage forest, impervious surface, and agriculture within the network catchment. Our results are consistent with other studies and suggest that alterations to the landscape, and specifically the transition from a forested catchment to one that contains impervious surface or agriculture, reduces the occurrence probability of wild Brook Trout. Our results, however, also suggest that the presence of Brown Trout results in lower occurrence probability of Brook Trout over a range of anthropogenic landscape characteristics, compared with streams where Brown Trout were absent.

  17. Growth and reproductive ecology of the eastern brook trout, Salvelinus fontinalis, in streams of differing vulnerability to acidic atmospheric deposition

    SciTech Connect

    Light, R.W.

    1983-01-01

    Three naturally infertile streams of differing vulnerability to acidic atmospheric deposition were studied to determine the status of their brook trout, Salvelinus fontinalis, populations and associated benthic communities. Of the three streams, Upper Three Runs was judged to be the least fertile, followed by Little Fishing Creek, with Roaring Run being the most fertile. The median weighted pH of acidic deposition impacting the watersheds was 3.8 for Upper Three Runs and 4.0 for Little Fishing Creek and Roaring Run. Brook trout from Roaring Run grew at a similar rate to those from Little Fishing Creek, with trout from Upper Three Runs showing the slowest growth. Roaring Run brook trout also had the highest relative condition of the three streams. Brook trout from Roaring Run and Little Fishing Creek generally matured one year later (age group II) than those from Upper Three Runs. Early maturity may be selected for in Upper Three Runs due to small annual increases in fecundity in higher age groups. Although the data were limited, there was a trend for brook trout from Upper Three Runs to produce fewer and larger ova. Roaring Run had higher volumes of benthos during fall and summer, and higher numbers during fall. Roaring Run and Little Fishing Creek had more, larger crayfish present, which added significantly to the volume of benthos in these streams. Qualitatively, Upper Three Runs had more shredders and fewer scrapers on a volume basis than the other two streams. On a per fish basis, the drift available to the fish in Roaring Run was always highest in volume, and highest in number during fall and spring. The brook trout from Roaring Run therefore had an advantage over those in the other two streams, by having a higher drift available per fish.

  18. Can nutrient limitations explain low and declining white spruce growth near the Arctic treeline in the eastern Brooks Range, Alaska?

    NASA Astrophysics Data System (ADS)

    Ellison, S.; Sullivan, P. F.

    2014-12-01

    The position of the Arctic treeline is of critical importance for global carbon cycling and surface energy budgets. However, controls on tree growth at treeline remain uncertain. In the Alaskan Brooks Range, 20th century warming has caused varying growth responses among treeline trees, with trees in the west responding positively, while trees in the east have responded negatively. The prevailing explanation of this trend ascribes the negative growth response to warming-induced drought stress in the eastern Brooks Range. However, recent measurements of carbon isotope discrimination in tree rings, xylem sap flow and needle gas exchange suggest that drought stress cannot explain these regional growth declines. Additionally, evidence from the western Brooks Range suggests that nutrient availability, rather than drought stress, may be the proximate control on tree growth. In this study, we investigated the hypothesis that low and declining growth of eastern Brooks Range trees is due to low and declining soil nutrient availability, which may continue to decrease with climate change as soils become drier and microbial activity declines. We compared microclimate, tree performance, and a wide range of proxies for soil nutrient availability in four watersheds along a west-east transect in the Brooks Range during the growing seasons of 2013 and 2014. We hypothesized that soil nutrient availability would track closely with the strong west-east precipitation gradient, with higher rainfall and greater soil nutrient availability in the western Brooks Range. We expected to find that soil water contents in the west are near optimum for nitrogen mineralization, while those in the east are below optimum. Needle nitrogen concentration, net photosynthesis, branch extension growth, and growth in the main stem are expected to decline with the hypothesized decrease in soil nutrient availability. The results of our study will elucidate the current controls on growth of trees near the

  19. Transverse sphericity of minimum bias proton-proton collisions in ALICE

    SciTech Connect

    Velasquez, A. Ortiz

    2011-04-26

    In this work we report the measurement of the shape of minimum bias events reconstructed by ALICE at 0.9 and 7 TeV. The evolution of the transverse sphericity (S{sub perpendicular}) with the multiplicity is studied as an approach to test the MC models using the transverse sphericity as the event shape variable. The results show that at high multiplicity the sphericity of ALICE events is 15% larger than predicted by the MC models. A second approach is based on the hardness. The sample was divided in the so-called 'soft' and 'hard' events defined by a cut in the transverse momentum of the leading particle (p{sub perpendicular}) = 2 GeV/c). With this definition, the soft events are more spherical than the hard ones. We found that MC models describe very well the soft events, but they fail for the hard ones.

  20. Alice in Wonderland syndrome as a presenting symptom of EBV infection.

    PubMed

    Liaw, S B; Shen, E Y

    1991-01-01

    Four Chinese patients (2 boys, 2 girls), ages 4-9 years, who had episodes of perception error of body schema and objects are reported. The metamorphopsia, which had been named Alice in Wonderland syndrome, is the major presentation. All of them were proved to have acute Epstein-Barr virus infection, as documented by positive heterophil antibody test and/or positive IgM antibody to Epstein-Barr virus capsid antigen. The duration of the perception disorder ranged from 1 week to 3 months. We believe that any young child presenting with Alice in Wonderland syndrome should undergo examination for Epstein-Barr virus infection; complete recovery from the disorder can be expected. PMID:1665694

  1. (Multi-)strange hadron and light (anti-)nuclei production with ALICE at the LHC

    NASA Astrophysics Data System (ADS)

    Lea, Ramona

    2016-01-01

    Thanks to its excellent tracking performance and particle identification capabilities, the ALICE detector allows for the identification of light (anti-)(hyper)nuclei and for the measurement of (multi-)strange particles over a wide range of transverse momentum. Deuterons, 3He and 4He and their corresponding anti-nuclei are identified via their specific energy loss in the Time Projection Chamber and the velocity measurement provided by the Time-Of-Flight detector. Strange and multi-strange baryons and mesons as well as (anti-)hypertritons are reconstructed via their topological decays. Detailed measurements of (multi-)strange hadron production in pp, p-Pb and Pb-Pb collision and of light (anti-)nuclei and (anti-)hypertritons in Pb-Pb collisions with ALICE at the LHC are presented. The experimental results will be compared with the predictions of both statistical hadronization and coalescence models.

  2. Potentials for J/{psi} from b decays measurement in the ALICE experiment at LHC

    SciTech Connect

    Di Giglio, Carmelo

    2010-12-22

    The ALICE potentials in proton-proton collisions for the measurement of the fraction of J/{psi} produced at central rapidity (|y|<0.9) in beauty hadrons semi-inclusive decays, namely B{yields}J/{psi}X, is discussed.This measurement relies on the combined use of the Time Projection Chamber (TPC), for tracking and particle identification via dE/dx measurement; the Inner Tracking System (ITS) for tracking and detection of displaced vertices; the Transition Radiation Detector (TRD) for particle identification.The description of the analysis method developed and the discussion of the estimate for a total J/{psi} statistics corresponding to one year of ALICE data taking in p-p collisions at {radical}(s) = 7 TeV is provided in the article.

  3. Growth of age-0 steelhead (Oncorhynchus mykiss) and brook trout (Salvelinus fontinalis) in the Pine River watershed, Alcona County, Michigan

    SciTech Connect

    Bellgraph, Brian J.; Thompson, Bradley E.; Hayes, Daniel B.; Riley, Timothy S.

    2006-12-01

    We sampled ten sites within the Pine River watershed, Alcona County, Michigan. In 2001, age-0 steelhead (Oncorhynchus mykiss) were collected to determine growth rates. In 2002, emergence dates of steelhead were determined by observational studies and age-0 steelhead and brook trout (Salvelinus fontinalis) were collected to determine growth rates. Steelhead emergence occurred from late June to mid-July 2002. Growth rates of both species varied among branches within the watershed (P<0.05). Steelhead growth varied from 0.24 to 0.42 mm/day and brook trout growth varied from 0.22 to 0.37 mm/day.

  4. Sedimentology and stratigraphy of the Kanayut Conglomerate, central and western Brooks Range, Alaska; report of 1981 field season

    USGS Publications Warehouse

    Nilsen, T.H.; Moore, T.E.

    1982-01-01

    The Upper Devonian and Lower Mississippian(?) Kanayut Conglomerate forms a major stratigraphic unit along the crest of the Brooks Range of northern Alaska. It crops out for an east-west distance of about 900 km and a north-south distance of about 65 km. The Kanayut is wholly allochthonous and has probably been transported northward on a series of thrust plates. The Kanayut is as thick as 2,600 m in the east-central Brooks Range. It thins and fines to the south and west. The Kanayut forms the middle part of the allochthonous sequence of the Endicott Group, an Upper Devonian and Mississippian clastic sequence underlain by platform limestones of the Baird Group and overlain by platform limestone, carbonaceous shale, and black chert of the Lisburne Group. The Kanayut overlies the marine Upper Devonian Noatak Sandstone or, where it is missing, the marine Upper Devonian Hunt Fork Shale. It is overlain by the marine Mississippian Kayak Shale. The Kanayut Conglomerate forms the fluvial part of a large, coarse-grained delta that prograded to the southwest in Late Devonian time and retreated in Early Mississippian time. Four sections of the Kanayut Conglomerate in the central Brooks Range and five in the western Brooks Range were measured in 1981. The sections from the western Brooks Range document the presence of fluvial cycles in the Kanayut as far west as the shores of the Chukchi Sea. The Kanayut in this area is generally finer grained than it is in the central and eastern Brooks Range, having a maximum clast size of 3 cm. It is probably about 300 m thick. The upper and lower contacts of the Kanayut are gradational. The lower Kanayut contains calcareous, marine-influenced sandstone within channel deposits, and the upper Kanayut contains probable marine interdistributary-bay shale sequences. The members of the Kanayut Conglomerate cannot be differentiated in this region. In the central Brooks Range, sections of the Kanayut Conglomerate at Siavlat Mountain and Kakivilak

  5. Alice in Wonderland Syndrome associated with a temporo-parietal cavernoma.

    PubMed

    Philip, Michelle; Kornitzer, Jeffery; Marks, David; Lee, Huey-Jen; Souayah, Nizar

    2015-12-01

    Alice in Wonderland Syndrome (AIWS) is characterized by a rare constellation of perceptual disturbances including distorted body image, metamorphopsia, and visual hallucinations. In this report, we relate a unique case of AIWS in a woman with a right temporo-parietal cavernoma. AIWS in this patient may be secondary to epileptiform activity associated with the cavernoma and improved with anti-epileptic treatment. PMID:25663031

  6. Migrainous Aura, Visual Snow, and "Alice in Wonderland" Syndrome in Childhood.

    PubMed

    Rastogi, Reena Gogia; VanderPluym, Juliana; Lewis, Kara Stuart

    2016-02-01

    Migraine is a condition that is common in the pediatric and adolescent population. Among children with migraine, visual aura can consist of either negative or positive features or both. Reports of sensory auras can also be elicited with a careful history. The understanding of the types of aura, as well as their relation to the more typical features of migraine, are discussed. The similar phenomena of visual snow and Alice in Wonderland syndrome in children are also described in detail. PMID:27017016

  7. Measurement of D-meson production in Pb—Pb collisions at the LHC with ALICE

    NASA Astrophysics Data System (ADS)

    Festanti, Andrea

    2016-01-01

    The measurement of D-meson production in heavy-ion collisions at LHC energy provides insights into the mechanisms of interaction of charm quarks in the hot and dense medium formed in these collisions. ALICE results on the D-meson nuclear modification factor and azimuthal anisotropy in Pb-Pb collisions at √sNN = 2.76 TeV are presented.

  8. Archival Legacy Investigation of Circumstellar Environments (ALICE): Overview and first results

    NASA Astrophysics Data System (ADS)

    Choquet, E.; Soummer, R.; Pueyo, L.; Perrin, M.; Chen, C.; Debes, J.; Golimowski, D. A.; Hagan, J. B.; Hines, D. C.; Marois, C.; Mawet, D.; Mittal, T.; Moerchen, M.; N'Diaye, M.; Rajan, A.; Reid, N.; Wolff, S.; Schneider, G.

    2014-03-01

    We are currently conducting a comprehensive and consistent reprocessing of archival HST-NICMOS coronagraphic surveys using advanced PSF subtraction methods, entitled the Archival Legacy Investigation of Circumstellar Environments program (ALICE, HST/AR 12652). This virtual campaign of about 400 HST orbits has already produced numerous new detections of previously unidentified point sources and circumstellar structures. We present five newly spatially resolved debris disks revealed in scattered light by our analysis of the archival data. Three of these disks (HD 30447, HD 35841, and HD 141943) appear to be edge-on, the fourth (HD 191089) appears to be an asymmetric inclined ring, and the fifth, HD 202917 confirms a dramatic asymmetric arc that had previously been detected in ACS GTO observations. These images provide new views of material around young solar-type stars at ages corresponding to the period of terrestrial planet formation in our solar system. We have also detected several new candidate substellar companions, for which there is an ongoing followup campaign, and discuss preliminary statistical constraints ALICE places on the occurrence of brown dwarf and exo-planet companions around nearby stars. Since the methods developed as part of ALICE are directly applicable to future missions (JWST, AFTA coronagraph) we emphasize the importance of devising optimal PSF subtraction methods for upcoming coronagraphic imaging missions. We describe efforts in defining direct imaging highlevel science products (HLSP) standards that can be applicable to other coronagraphic campaigns, including ground-based (e.g., Gemini Planet Imager), and future space instruments (e.g., JWST). ALICE will deliver a first release of HLSPs to the community through the MAST archive at STScI in 2014.

  9. Abnormal visual evoked potentials in children with "Alice in Wonderland" syndrome due to infectious mononucleosis.

    PubMed

    Lahat, E; Berkovitch, M; Barr, J; Paret, G; Barzilai, A

    1999-11-01

    Visual illusions characterized by distortion of form, size, reciprocal position of objects, movement, or color, labeled as "Alice in Wonderland" syndrome, were discussed in children with infectious mononucleosis, as well as in other clinical conditions, such as migraine, epilepsy, use of certain hallucinogenic drugs, etc. The purpose of our study was to investigate for the first time visual evoked potential results in children with "Alice in Wonderland" syndrome associated with infectious mononucleosis. Five children with "Alice in Wonderland" syndrome associated with infectious mononucleosis underwent visual evoked potential studies during and after their clinical symptoms. Visual evoked potential results during the disease demonstrated statistically significant high amplitudes of P100-N145 in all children compared to the control group. A few weeks later, repeated studies after the resolution of the complaints were normal. Since the same findings can be observed in patients with migraine, we postulate that a common pathophysiologic underlying abnormality, which can cause transient focal decreased cerebral perfusion, could be involved in the disease process of these two conditions. PMID:10593551

  10. Technical Design Report for the Upgrade of the ALICE Inner Tracking System

    NASA Astrophysics Data System (ADS)

    ALICE Collaboration; Abelev, B.; Adam, J.; Adamová, D.; Aggarwal, M. M.; Aglieri Rinella, G.; Agnello, M.; Agostinelli, A.; Agrawal, N.; Ahammed, Z.; Ahmad, N.; Masoodi, A. Ahmad; Ahmed, I.; Ahn, S. U.; Ahn, S. A.; Aimo, I.; Aiola, S.; Ajaz, M.; Akindinov, A.; Aleksandrov, D.; Alessandro, B.; Alexandre, D.; Alici, A.; Alkin, A.; Alme, J.; Alt, T.; Altini, V.; Altinpinar, S.; Altsybeev, I.; Alves Garcia Prado, C.; Anderssen, E. C.; Andrei, C.; Andronic, A.; Anguelov, V.; Anielski, J.; Antičić, T.; Antinori, F.; Antonioli, P.; Aphecetche, L.; Appelshäuser, H.; Arbor, N.; Arcelli, S.; Armesto, N.; Arnaldi, R.; Aronsson, T.; Arsene, I. C.; Arslandok, M.; Augustinus, A.; Averbeck, R.; Awes, T. C.; Azmi, M. D.; Bach, M.; Badala, A.; Baek, Y. W.; Bagnasco, S.; Bailhache, R.; Bairathi, V.; Bala, R.; Baldisseri, A.; Baltasar Dos Santos Pedrosa, F.; Bán, J..; Baral, R. C.; Barbera, R.; Barile, F.; Barnaföldi, G. G.; Barnby, L. S.; Barret, V.; Bartke, J.; Basile, M.; Bastian Van Beelen, J.; Bastid, N.; Basu, S.; Bathen, B.; Batigne, G.; Battistin, M.; Batyunya, B.; Batzing, P. C.; Baudot, J.; Baumann, C.; Bearden, I. G.; Beck, H.; Bedda, C.; Behera, N. K.; Belikov, I.; Bellini, F.; Bellwied, R.; Belmont-Moreno, E.; Bencedi, G.; Benettoni, M.; Benotto, F.; Beole, S.; Berceanu, I.; Bercuci, A.; Berdnikov, Y.; Berenyi, D.; Berger, M. E.; Bertens, R. A.; Berzano, D.; Besson, A.; Betev, L.; Bhasin, A.; Bhati, A. K.; Bhatti, A.; Bhattacharjee, B.; Bhom, J.; Bianchi, L.; Bianchi, N.; Bianchin, C.; Bielčík, J.; Bielčíková, J.; Bilandzic, A.; Bjelogrlic, S.; Blanco, F.; Blau, D.; Blume, C.; Bock, F.; Boehmer, F. V.; Bogdanov, A.; Bøggild, H.; Bogolyubsky, M.; Boldizsár, L.; Bombara, M.; Book, J.; Borel, H.; Borissov, A.; Bornschein, J.; Borshchov, V. N.; Bortolin, C.; Bossú, F.; Botje, M.; Botta, E.; Böttger, S.; Braun-Munzinger, P.; Breitner, T.; Broker, T. A.; Browning, T. A.; Broz, M.; Bruna, E.; Bruno, G. E.; Budnikov, D.; Buesching, H.; Bufalino, S.; Buncic, P.; Busch, O.; Buthelezi, Z.; Caffarri, D.; Cai, X.; Caines, H.; Caliva, A.; Calvo Villar, E.; Camerini, P.; Canoa Roman, V.; Carena, F.; Carena, W.; Cariola, P.; Carminati, F.; Casanova Díaz, A.; Castillo Castellanos, J.; Casula, E. A. R.; Catanescu, V.; Caudron, T.; Cavicchioli, C.; Ceballos Sanchez, C.; Cepila, J.; Cerello, P.; Chang, B.; Chapeland, S.; Charvet, J. L.; Chattopadhyay, S.; Chattopadhyay, S.; Cherney, M.; Cheshkov, C.; Cheynis, B.; Chibante Barroso, V.; Chinellato, D. D.; Chochula, P.; Chojnacki, M.; Choudhury, S.; Christakoglou, P.; Christensen, C. H.; Christiansen, P.; Chujo, T.; Chung, S. U.; Cicalo, C.; Cifarelli, L.; Cindolo, F.; Claus, G.; Cleymans, J.; Colamaria, F.; Colella, D.; Coli, S.; Colledani, C.; Collu, A.; Colocci, M.; Conesa Balbastre, G.; Conesa del Valle, Z.; Connors, M. E.; Contin, G.; Contreras, J. G.; Cormier, T. M.; Corrales Morales, Y.; Cortese, P.; Cortés Maldonado, I.; Cosentino, M. R.; Costa, F.; Crochet, P.; Cruz Albino, R.; Cuautle, E.; Cunqueiro, L.; Dainese, A.; Dang, R.; Danu, A.; Da Riva, E.; Das, D.; Das, I.; Das, K.; Das, S.; Dash, A.; Dash, S.; De, S.; Decosse, C.; DelagrangeI, H.; Deloff, A.; Déenes, E.; D'Erasmo, G.; de Barros, G. O. V.; De Caro, A.; de Cataldo, G.; de Cuveland, J.; De Falco, A.; De Gruttola, D.; De Marco, N.; De Pasquale, S.; De Robertis, G.; De Roo, K.; de Rooij, R.; Diaz Corchero, M. A.; Dietel, T.; Divia, R.; Di Bari, D.; Di Liberto, S.; Di Mauro, A.; Di Nezza, P.; Djuvsland, Ø.; Dobrin, A.; Dobrowolski, T.; Domenicis Gimenez, D.; Dönigus, B.; Dordic, O.; Dorheim, S.; Dorokhov, A.; Doziere, G.; Dubey, A. K.; Dubla, A.; Ducroux, L.; Dulinski, W.; Dupieux, P.; Dutta Majumdar, A. K.; Ehlers, R. J., III; Elia, D.; Engel, H.; Erazmus, B.; Erdal, H. A.; Eschweiler, D.; Espagnon, B.; Estienne, M.; Esumi, S.; Evans, D.; Evdokimov, S.; Eyyubova, G.; Fabris, D.; Faivre, J.; Falchieri, D.; Fantoni, A.; Fasel, M.; Fehlker, D.; Feldkamp, L.; Felea, D.; Feliciello, A.; Feofilov, G.; Ferencei, J.; Fernádez Téllez, A.; Ferreiro, E. G.; Ferretti, A.; Festanti, A.; Figiel, J.; Figueredo, M. A. S.; Filchagin, S.; Finogeev, D.; Fionda, F. M.; Fiore, E. M.; Fiorenza, G.; Floratos, E.; Floris, M.; Foertsch, S.; Foka, P.; Fokin, S.; Fragiacomo, E.; Francescon, A.; Franco, M.; Frankenfeld, U.; Fuchs, U.; Furget, C.; Fusco Girard, M.; Gaardhøje, J. J.; Gagliardi, M.; Gajanana, D.; Gallio, M.; Gangadharan, D. R.; Ganoti, P.; Garabatos, C.; Garcia-Solis, E.; Gargiulo, C.; Garishvili, I.; Gerhard, J.; Germain, M.; Gheata, A.; Gheata, M.; Ghidini, B.; Ghosh, P.; Ghosh, S. K.; Gianotti, P.; Giubilato, P.; Giubellino, P.; Gladysz-Dziadus, E.; Glässel, P.; Gomez, R.; Gomez Marzoa, M.; Gonzáalez-Zamora, P.; Gorbunov, S.; Görlich, L.; Gotovac, S.; Graczykowski, L. K.; Grajcarek, R.; Greiner, L. C.; Grelli, A.; Grigoras, A.; Grigoras, C.; Grigoriev, V.; Grigoryan, A.; Grigoryan, S.; Grinyov, B.; Grion, N.; Grondin, D.; Grosse-Oetringhaus, J. F.; Grossiord, J.-Y.; Grosso, R.; Guber, F.; Guernane, R.; Guerzoni, B.; Guilbaud, M.; Gulbrandsen, K.; Gulkanyan, H.; Gunji, T.; Gupta, A.; Gupta, R.; Khan, K. H.; Haake, R.; Haaland, Ø.; Hadjidakis, C.; Haiduc, M.; Hamagaki, H.; Hamar, G.; Hanratty, L. D.; Hansen, A.; Harris, J. W.; Hartmann, H.; Harton, A.; Hatzifotiadou, D.; Hayashi, S.; Heckel, S. T.; Heide, M.; Helstrup, H.; Hennes, E.; Herghelegiu, A.; Herrera Corral, G.; Hess, B. A.; Hetland, K. F.; Hicks, B.; Hillemanns, H.; Himmi, A.; Hippolyte, B.; Hladky, J.; Hristov, P.; Huang, M.; Hu-Guo, C.; Humanic, T. J.; Hutter, D.; Hwang, D. S.; Igolkin, S.; Ijzermans, P.; Ilkaev, R.; Ilkiv, I.; Inaba, M.; Incani, E.; Innocenti, G. M.; Ionita, C.; Ippolitov, M.; Irfan, M.; Ivanov, M.; Ivanov, V.; Ivanytskyi, O.; Jachołkowski, A.; Jadlovsky, J.; Jahnke, C.; Jang, H. J.; Janik, M. A.; Jayarathna, P. H. S. Y.; Jena, S.; Jimenez Bustamante, R. T.; Jones, P. G.; Jung, H.; Junique, A.; Jusko, A.; Kalcher, S.; Kalinak, P.; Kalweit, A.; Kamin, J.; Kang, J. H.; Kaplin, V.; Kar, S.; Karasu Uysal, A.; Karavichev, O.; Karavicheva, T.; Karpechev, E.; Kebschull, U.; Keidel, R.; Keil, M.; Ketzer, B.; Khan, M. Mohisin.; Khan, P.; Khan, S. A.; Khanzadeev, A.; Kharlov, Y.; Kileng, B.; Kim, B.; Kim, D.; Kim, D. W.; Kim, D. J.; Kim, J. S.; Kim, M.; Kim, M.; Kim, S.; Kim, T.; Kirsch, S.; Kisel, I.; Kiselev, S.; Kisiel, A.; Kiss, G.; Klay, J. L.; Klein, J.; Klein-Bösing, C.; Kluge, A.; Knichel, M. L.; Knospe, A. G.; Kobdaj, C.; Kofarago, M.; Köhler, M. K.; Kollegger, T.; Kolojvari, A.; Kondratiev, V.; Kondratyeva, N.; Konevskikh, A.; Kovalenko, V.; Kowalski, M.; Kox, S.; Koyithatta Meethaleveedu, G.; Kral, J.; Králik, I.; Kramer, F.; Kravčáková, A.; Krelina, M.; Kretz, M.; Krivda, M.; Krizek, F.; Krus, M.; Krymov, E. B.; Kryshen, E.; Krzewicki, M.; Kučera, V.; Kucheriaev, Y.; Kugathasan, T.; Kuhn, C.; Kuijer, P. G.; Kulakov, I.; Kumar, J.; Kurashvili, P.; Kurepin, A.; Kurepin, A. B.; Kuryakin, A.; Kushpil, S.; Kushpil, V.; Kweon, M. J.; Kwon, Y.; Ladron de Guevara, P.; Lagana Fernandes, C.; Lakomov, I.; Langoy, R.; Lara, C.; Lardeux, A.; Lattuca, A.; La Pointe, S. L.; La Rocca, P.; Lea, R.; Lee, G. R.; Legrand, I.; Lehnert, J.; Lemmon, R. C.; Lenhardt, M.; Lenti, V.; Leogrande, E.; Leoncino, M.; León Monzón, I.; Lesenechal, Y.; Lévai, P.; Li, S.; Lien, J.; Lietava, R.; Lindal, S.; Lindenstruth, V.; Lippmann, C.; Lisa, M. A.; Listratenko, O. M.; Ljunggren, H. M.; Lodato, D. F.; Loddo, F.; Loenne, P. I.; Loggins, V. R.; Loginov, V.; Lohner, D.; Loizides, C.; Lopez, X.; López Torres, E.; Lu, X.-G.; Luettig, P.; Lunardon, M.; Luo, J.; Luparello, G.; Luzzi, C.; Gago, A. M.; Jacobs, P. M.; Ma, R.; Maevskaya, A.; Mager, M.; Mahapatra, D. P.; Maire, A.; Malaev, M.; Maldonado Cervantes, I.; Malinina, L.; Mal'kevich, D.; Maltsev, N. A.; Malzacher, P.; Mamonov, A.; Manceau, L.; Manko, V.; Manso, F.; Manzari, V.; Mapelli, A.; Marchisone, M.; Mareš, J.; Margagliotti, G. V.; Margotti, A.; Marín, A.; Marin Tobon, C. A.; Markert, C.; Marquard, M.; Marras, D.; Martashvili, I.; Martin, N. A.; Martinengo, P.; Martínez, M. I.; Martínez García, G.; Blanco, J. Martin; Martynov, Y.; Mas, A.; Masciocchi, S.; Masera, M.; Maslov, M.; Masoni, A.; Massacrier, L.; Mastroserio, A.; Mattiazzo, S.; Matyja, A.; Mayer, C.; Mazer, J.; Mazumder, R.; Mazza, G.; Mazzoni, M. A.; Meddi, F.; Menchaca-Rocha, A.; Mercado Pérez, J.; Meres, M.; Miake, Y.; Mikhaylov, K.; Milano, L.; Milosevic, J.; Mischke, A.; Mishra, A. N.; Miśkowiec, D.; Mitu, C. M.; Mlynarz, J.; Mohanty, B.; Molnar, L.; Mongelli, M.; Montanõ Zetina, L.; Montes, E.; Morando, M.; Moreira De Godoy, D. A.; Morel, F.; Moretto, S.; Morreale, A.; Morsch, A.; Muccifora, V.; Mudnic, E.; Bhopal, F. Muhammad; Muhuri, S.; Mukherjee, M.; Müller, H.; Munhoz, M. G.; Murray, S.; Musa, L.; Musinsky, J.; Nandi, B. K.; Nania, R.; Nappi, E.; Nattrass, C.; Nayak, T. K.; Nazarenko, S.; Nedosekin, A.; Nicassio, M.; Niculescu, M.; Nielsen, B. S.; Nikolaev, S.; Nikulin, S.; Nikulin, V.; Nilsen, B. S.; Noferini, F.; Nomokonov, P.; Nooren, G.; Nyanin, A.; Nystrand, J.; Oeschler, H.; Oh, S.; Oh, S. K.; Okatan, A.; Olah, L.; Oleniacz, J.; Oliveira Da Silva, A. C.; Onderwaater, J.; Oppedisano, C.; Ortiz Velasquez, A.; Oskarsson, A.; Otwinowski, J.; Oyama, K.; Pachmayer, Y.; Pachr, M.; Pagano, P.; Paíc, G.; Painke, F.; Pajares, C.; Pal, S. K.; Palmeri, A.; Panati, S.; Pant, D.; Pantano, D.; Papikyan, V.; Pappalardo, G. S.; Park, W. J.; Passfeld, A.; Pastore, C.; Patalakha, D. I.; Paticchio, V.; Paul, B.; Pawlak, T.; Peitzmann, T.; Pereira Da Costa, H.; Pereira De Oliveira Filho, E.; Peresunko, D.; Pérez Lara, C. E.; Peryt, I. W.; Pesci, A.; Pestov, Y.; Petagna, P.; Petráček, V.; Petran, M.; Petris, M.; Petrovici, M.; Petta, C.; Pham, H.; Piano, S.; Pikna, M.; Pillot, P.; Pinazza, O.; Pinsky, L.; Piyarathna, D. B.; Płoskoń, M.; Planinic, M.; Pluta, J.; Pochybova, S.; Podesta-Lerma, P. L. M.; Poghosyan, M. G.; Pohjoisaho, E. H. O.; Polichtchouk, B.; Poljak, N.; Pop, A.; Porteboeuf-Houssais, S.; Porter, J.; Pospisil, V.; Potukuchi, B.; Prasad, S. K.; Preghenella, R.; Prino, F.; Protsenko, M. A.; Pruneau, C. A.; Pshenichnov, I.; Puddu, G.; Puggioni, C.; Punin, V.; Putschke, J.; Qvigstad, H.; Rachevski, A.; Raha, S.; Rak, J.; Rakotozafindrabe, A.; Ramello, L.; Raniwala, R.; Raniwala, S.; Räsänen, S. S.; Rascanu, B. T.; Rasson, J. E.; Rathee, D.; Rauf, A. W.; Razazi, V.; Read, K. F.; Real, J. S.; Redlich, K.; Reed, R. J.; Rehman, A.; Reichelt, P.; Reicher, M.; Reidt, F.; Renfordt, R.; Reolon, A. R.; Reshetin, A.; Rettig, F.; Revol, J.-P.; Reygers, K.; Riabov, V.; Ricci, R. A.; Richert, T.; Richter, M.; Riedler, P.; Riegler, W.; Riggi, F.; Rivetti, A.; Rocco, E.; Rodríguez Cahuantzi, M.; Rodriguez Manso, A.; Røed, K.; Rogochaya, E.; Rohni, S.; Rohr, D.; Röhrich, D.; Romita, R.; Ronchetti, F.; Ronflette, L.; Rosnet, P.; Rossegger, S.; Rossewij, M. J.; Rossi, A.; Roudier, S.; Rousset, J.; Roy, A.; Roy, C.; Roy, P.; Rubio Montero, A. J.; Rui, R.; Russo, R.; Ryabinkin, E.; Ryabov, Y.; Rybicki, A.; Sacchetti, M.; Sadovsky, S.; Šafařík, K.; Sahlmuller, B.; Sahoo, R.; Sahu, P. K.; Saini, J.; Salgado, C. A.; Salzwedel, J.; Sambyal, S.; Samsonov, V.; Sanchez Castro, X.; Sánchez Rodríguez, F. J.; Šándor, L.; Sandoval, A.; Sano, M.; Santagati, G.; Santoro, R.; Sarkar, D.; Scapparone, E.; Scarlassara, F.; Scharenberg, R. P.; Schiaua, C.; Schicker, R.; Schipper, J. D.; Schmidt, C.; Schmidt, H. R.; Schuchmann, S.; Schukraft, J.; Schulc, M.; Schuster, T.; Schutz, Y.; Schwarz, K.; Schweda, K.; Scioli, G.; Scomparin, E.; Scott, P. A.; Scott, R.; Segato, G.; Seger, J. E.; Selyuzhenkov, I.; Senyukhov, S.; Seo, J.; Serradilla, E.; Sevcenco, A.; Sgura, I.; Shabetai, A.; Shabratova, G.; Shahoyan, R.; Shangaraev, A.; Sharma, N.; Sharma, S.; Shigaki, K.; Shtejer, K.; Sibiriak, Y.; Siddhanta, S.; Siemiarczuk, T.; Silvermyr, D.; Silvestre, C.; Simatovic, G.; Singaraju, R.; Singh, R.; Singha, S.; Singhal, V.; Sinha, B. C.; Sinha, T.; Sitar, B.; Sitta, M.; Skaali, T. B.; Skjerdal, K.; Smakal, R.; Smirnov, N.; Snellings, R. J. M.; Snoeys, W.; Søgaard, C.; Soltz, R.; Song, J.; Song, M.; Soramel, V. Sooden F.; Sorensen, S.; Spacek, M.; Špalek, J.; Spiriti, E.; Sputowska, I.; Spyropoulou-Stassinaki, M.; Srivastava, B. K.; Stachel, J.; Stan, I.; Stefanek, G.; Steinpreis, M.; Stenlund, E.; Steyn, G.; Stiller, J. H.; Stocco, D.; Stolpovskiy, M.; Strmen, P.; Suaide, A. A. P.; Subieta Vasquez, M. A.; Sugitate, T.; Suire, C.; Suleymanov, M.; Šuljić, M.; Sultanov, R.; Šumbera, M.; Sun, X.; Susa, T.; Symons, T. J. M.; Szanto de Toledo, A.; Szarka, I.; Szczepankiewicz, A.; Szymanski, M.; Takahashi, J.; Tangaro, M. A.; Tapia Takaki, J. D.; Tarantola Peloni, A.; Tarazona Martinez, A.; Tauro, A.; Tejeda Muñoz, G.; Telesca, A.; Terrevoli, C.; Ter Minasyan, A.; Thäder, J.; Thomas, D.; Tieulent, R.; Timmins, A. R.; Toia, A.; Torii, H.; Trubnikov, V.; Trzaska, W. H.; Tsuji, T.; Tumkin, A.; Turchetta, R.; Turrisi, R.; Tveter, T. S.; Tymchuk, I. T.; Ulery, J.; Ullaland, K.; Uras, A.; Usai, G. L.; Vajzer, M.; Vala, M.; Palomo, L. Valencia; Valentino, V.; Valin, I.; Vallero, S.; Vande Vyvre, P.; Vannucci, L.; Van Der Maarel, J.; Van Hoorne, J. W.; van Leeuwen, M.; Vargas, A.; Varma, R.; Vasileiou, M.; Vasiliev, A.; Vasta, P.; Vechernin, V.; Veldhoen, M.; Velure, A.; Venaruzzo, M.; Vercellin, E.; Vergara Limón, S.; Verlaat, B.; Vernet, R.; Verweij, M.; Vickovic, L.; Viesti, G.; Viinikainen, J.; Vilakazi, Z.; Villalobos Baillie, O.; Vinogradov, A.; Vinogradov, L.; Vinogradov, Y.; Virgili, T.; Viyogi, Y. P.; Vodopyanov, A.; Völkl, M. A.; Voloshin, K.; Voloshin, S. A.; Volpe, G.; von Haller, B.; Vorobyev, I.; Vranic, D.; Vrláková, J.; Vulpescu, B.; Vyushin, A.; Wagner, B.; Wagner, J.; Wagner, V.; Wang, M.; Wang, Y.; Watanabe, D.; Weber, M.; Wessels, J. P.; Westerhoff, U.; Wiechula, J.; Wikne, J.; Wilde, M.; Wilk, G.; Wilkinson, J.; Williams, M. C. S.; Windelband, B.; Winn, M.; Winter, M.; Xiang, C.; Yaldo, C. G.; Yamaguchi, Y.; Yang, H.; Yang, P.; Yang, S.; Yano, S.; Yasnopolskiy, S.; Yi, J.; Yin, Z.; Yoo, I.-K.; Yushmanov, I.; Zaccolo, V.; Zach, C.; Zaman, A.; Zampolli, C.; Zaporozhets, S.; Zarochentsev, A.; Závada, P.; Zaviyalov, N.; Zbroszczyk, H.; Zgura, I. S.; Zhalov, M.; Zhang, F.; Zhang, H.; Zhang, X.

    2014-08-01

    ALICE (A Large Ion Collider Experiment) is studying the physics of strongly interacting matter, and in particular the properties of the Quark-Gluon Plasma (QGP), using proton-proton, proton-nucleus and nucleus-nucleus collisions at the CERN LHC (Large Hadron Collider). The ALICE Collaboration is preparing a major upgrade of the experimental apparatus, planned for installation in the second long LHC shutdown in the years 2018-2019. A key element of the ALICE upgrade is the construction of a new, ultra-light, high-resolution Inner Tracking System (ITS) based on monolithic CMOS pixel detectors. The primary focus of the ITS upgrade is on improving the performance for detection of heavy-flavour hadrons, and of thermal photons and low-mass di-electrons emitted by the QGP. With respect to the current detector, the new Inner Tracking System will significantly enhance the determination of the distance of closest approach to the primary vertex, the tracking efficiency at low transverse momenta, and the read-out rate capabilities. This will be obtained by seven concentric detector layers based on a 50 μm thick CMOS pixel sensor with a pixel pitch of about 30×30 μm2. This document, submitted to the LHCC (LHC experiments Committee) in September 2013, presents the design goals, a summary of the R&D activities, with focus on the technical implementation of the main detector components, and the projected detector and physics performance.

  11. Flexible event reconstruction software chains with the ALICE High-Level Trigger

    NASA Astrophysics Data System (ADS)

    Ram, D.; Breitner, T.; Szostak, A.

    2012-12-01

    The ALICE High-Level Trigger (HLT) has a large high-performance computing cluster at CERN whose main objective is to perform real-time analysis on the data generated by the ALICE experiment and scale it down to at-most 4GB/sec - which is the current maximum mass-storage bandwidth available. Data-flow in this cluster is controlled by a custom designed software framework. It consists of a set of components which can communicate with each other via a common control interface. The software framework also supports the creation of different configurations based on the detectors participating in the HLT. These configurations define a logical data processing “chain” of detector data-analysis components. Data flows through this software chain in a pipelined fashion so that several events can be processed at the same time. An instance of such a chain can run and manage a few thousand physics analysis and data-flow components. The HLT software and the configuration scheme used in the 2011 heavy-ion runs of ALICE, has been discussed in this contribution.

  12. Jet-underlying event studies with ALICE detector at the LHC

    NASA Astrophysics Data System (ADS)

    Abelev, Betty

    2011-10-01

    Relativistic heavy ion collisions produce a state of strongly interacting matter of quarks and gluons, called the Quark Gluon Plasma (QGP). Measuring particle production via fragmentation (specifically in jets) and understanding parton energy loss in the QGP enables one to directly probe the medium. One of the necessary components in studying jets in heavy ion events is the ability to isolate jets from the soft physics background, i.e., the underlying event. Thus it is important to understand the underlying event properties, in particular, energy fluctuations. This presentation will address the initial studies done to map out the underlying event in √{ s} = 7 TeV pp collisions measured with the ALICE detector at the LHC, as preparation for extending these studies to Pb-Pb collisions. The focus will be on the analyses performed with the ALICE Electro-Magnetic Calorimeter (EMCal). EMCal is especially well-suited for the measurement of high-momentum particles which are produced predominantly in jets and therefore is a useful tool in subtracting the jet cone from the underlying event. For the ALICE Collaboration.

  13. Monolithic active pixel sensor development for the upgrade of the ALICE inner tracking system

    NASA Astrophysics Data System (ADS)

    Aglieri, G.; Cavicchioli, C.; Chalmet, P. L.; Chanlek, N.; Collu, A.; Giubilato, P.; Hillemanns, H.; Junique, A.; Keil, M.; Kim, D.; Kim, J.; Kugathasan, T.; Lattuca, A.; Mager, M.; Marin Tobon, C. A.; Marras, D.; Martinengo, P.; Mattiazzo, S.; Mazza, G.; Mugnier, H.; Musa, L.; Pantano, D.; Puggioni, C.; Rousset, J.; Reidt, F.; Riedler, P.; Siddhanta, S.; Snoeys, W.; Usai, G.; van Hoorne, J. W.; Yang, P.; Yi, J.

    2013-12-01

    ALICE plans an upgrade of its Inner Tracking System for 2018. The development of a monolithic active pixel sensor for this upgrade is described. The TowerJazz 180 nm CMOS imaging sensor process has been chosen as it is possible to use full CMOS in the pixel due to the offering of a deep pwell and also to use different starting materials. The ALPIDE development is an alternative to approaches based on a rolling shutter architecture, and aims to reduce power consumption and integration time by an order of magnitude below the ALICE specifications, which would be quite beneficial in terms of material budget and background. The approach is based on an in-pixel binary front-end combined with a hit-driven architecture. Several prototypes have already been designed, submitted for fabrication and some of them tested with X-ray sources and particles in a beam. Analog power consumption has been limited by optimizing the Q/C of the sensor using Explorer chips. Promising but preliminary first results have also been obtained with a prototype ALPIDE. Radiation tolerance up to the ALICE requirements has also been verified.

  14. Event Plane Resolution Simulations for The Fast Interaction Trigger Detector of ALICE at the LHC

    NASA Astrophysics Data System (ADS)

    Sulaimon, Isiaka; Harton, Austin; Garcia, Edmundo; Alice-Fit Collaboration

    2016-03-01

    CERN (European Center for Nuclear Research) is a global laboratory that studies proton and heavy ion collisions at the Large Hadron Collider (LHC). ALICE (A Large Ion Collider Experiment) is one of four large experiments of the LHC. ALICE is dedicated to the study of the transition of matter to Quark Gluon Plasma in heavy ion collisions. In the present ALICE detector there are two sub-detectors, (the T0 and V0), that provide minimum bias trigger, multiplicity trigger, beam-gas event rejection, collision time for other sub detectors, on line multiplicity and event plane determination. In order to adapt these functionalities to the collision rates expected for the LHC upgrade after 2020, it is planned to replace these systems by a single detector system, called the Fast Interaction Trigger (FIT). In this presentation we describe the performance parameters of the FIT upgrade; show the proposed characteristics of the T0-Plus and the simulations that support the conceptual design of this detector. In particular we describe the performance simulations of the event plane resolution. This material is based upon work supported by the National Science Foundation under Grants NSF-PHY-0968903 and NSF-PHY-1305280.

  15. Study of muon bundles from extensive air showers with the ALICE detector at CERN LHC

    NASA Astrophysics Data System (ADS)

    Shtejer, K.

    2016-05-01

    ALICE is one of four large experiments at the CERN Large Hadron Collider, specially designed to study particle production in ultra-relativistic heavy-ion collisions. Located 52 meters underground with 28 meters of overburden rock, it has also been used to detect muons produced by cosmic-ray interactions in the upper atmosphere. The large size and excellent tracking capability of the ALICE Time Projection Chamber are exploited to study the muonic component of extensive air showers. We present the multiplicity distribution of these atmospheric muons and its comparison with Monte Carlo simulations. The latest version of the QGSJET hadronic interaction model was used to simulate the development of the resulting air showers. High multiplicity events containing more than 100 reconstructed muons were also studied. Similar events have been studied in previous underground experiments such as ALEPH and DELPHI at LEP without satisfactory explanations for the frequency of the highest multiplicity events. We demonstrate that the high muon-multiplicity events observed in ALICE stem from primary cosmic rays with energies above 1016 eV and that the frequency of these events can be successfully described by assuming a heavy mass composition of primary cosmic rays in this energy range.

  16. Integration of XRootD into the cloud infrastructure for ALICE data analysis

    NASA Astrophysics Data System (ADS)

    Kompaniets, Mikhail; Shadura, Oksana; Svirin, Pavlo; Yurchenko, Volodymyr; Zarochentsev, Andrey

    2015-12-01

    Cloud technologies allow easy load balancing between different tasks and projects. From the viewpoint of the data analysis in the ALICE experiment, cloud allows to deploy software using Cern Virtual Machine (CernVM) and CernVM File System (CVMFS), to run different (including outdated) versions of software for long term data preservation and to dynamically allocate resources for different computing activities, e.g. grid site, ALICE Analysis Facility (AAF) and possible usage for local projects or other LHC experiments. We present a cloud solution for Tier-3 sites based on OpenStack and Ceph distributed storage with an integrated XRootD based storage element (SE). One of the key features of the solution is based on idea that Ceph has been used as a backend for Cinder Block Storage service for OpenStack, and in the same time as a storage backend for XRootD, with redundancy and availability of data preserved by Ceph settings. For faster and easier OpenStack deployment was applied the Packstack solution, which is based on the Puppet configuration management system. Ceph installation and configuration operations are structured and converted to Puppet manifests describing node configurations and integrated into Packstack. This solution can be easily deployed, maintained and used even in small groups with limited computing resources and small organizations, which usually have lack of IT support. The proposed infrastructure has been tested on two different clouds (SPbSU & BITP) and integrates successfully with the ALICE data analysis model.

  17. The role of Ca(2+) and Na (+) membrane transport in brook trout (Salvelinus fontinalis) spermatozoa motility.

    PubMed

    Bondarenko, Olga; Dzyuba, Borys; Cosson, Jacky; Rodina, Marek; Linhart, Otomar

    2014-10-01

    The role of environmental ion composition and osmolality in Ca(2+) signaled activation was assessed in spermatozoa of brook trout Salvelinus fontinalis. Milt from ten mature males was obtained by abdominal massage. Spermatozoa motility was evaluated in 0, 100, and 300 mOsm/kg NaCl or sucrose solutions, buffered by 10 mM Tris-HCl pH 8.5. For investigation of spermatozoa reaction to external Ca(2+) concentration, 2 mM ethylene glycol tetraacetic acid (EGTA) was added to the activation media as a calcium ions chelator. For investigation of the effect of external Na(+) concentration in conditions of low external Ca(2+), 100 µM amiloride was added to the EGTA-containing solutions as a Na(+) transport blocker. Low motility was observed in sucrose (Na(+) free) solutions containing 2 mM EGTA but not in Na(+) solutions containing 2 mM EGTA. Addition of amiloride led to significantly increased motility (P < 0.05) compared with sucrose (Na(+) free) solutions containing 2 mM EGTA. We conclude that Na(+) transport in Ca(2+)-free solutions plays a regulatory role in brook trout spermatozoa activation. The influence of competitive Na(+) and Ca(2+) transport on the control of spermatozoa activation requires further study with respect to its application for improvement of artificial activation and storage media. PMID:24718964

  18. Acoustical measurements of DOE/NASA MOD-0 wind turbine at Plum Brook Station, Ohio

    SciTech Connect

    Etter, C.L.; Kelley, N.D.; McKenna, H.E.; Linn, C.; Garrelts, R.

    1983-06-01

    This report documents the evaluation of low-frequency acoustic emissions associated with the operation of the DOE/NASA MOD-0 wind turbine generator located at Plum Brook Station, Ohio. These measurements were taken as part of a joint SERI/NASA Brook Station, Ohio. These measurements were taken as part of a joint SERI/NASA effort to study acoustic noise generation by utility-sized wind turbines. The machine-operating conditions closely simulated the operation of the larger DOE/NASA MOD-1 wind turbine installed near Boone, NC, in both its design downwind configuration and theoretical upwind mode. Measurement results indicated that acoustic impulses characteristic of the MOD-1 turbine were detectable only with a downwind configuration and a 35-rpm rotor speed, a situation which parallels a 23-rpm rotor speed operation on the MOD-1. Under the available meteorological conditions, no impulses were detected during downwind 23 rpm or by wind-induced noise, indicating a severe limitation of the microphone configuration used in these tests.

  19. Middle Jurassic U-Pb crystallization age for Siniktanneyak Mountain ophiolite, Brooks Range, Alaska

    SciTech Connect

    Moore, T.E. ); Aleinikoff, J.N.; Walter, M. )

    1993-04-01

    The authors report here a U-Pb age for the Siniktanneyak Mountain Ophiolite klippe in the west-central Brooks Range, the first U-Pb ophiolite age in northern Alaska. Like klippen of mafic and ultramafic rocks in the Brooks Range, the Siniktanneyak Mountain klippe is composed of a lower allochthon of Devonian and younger( ) diabase and metabasalt with trace-element characteristics of seamount basalts and an upper allochthon of ophiolite. The ophiolite is partial, consisting of (1) abundant dunite and subordinate harzburgite and wehrlite; (2) cumulate clinopyroxene gabbro, and (3) minor noncumulate clinopyroxene gabbro and subordinate plagiogranite; no sheeted dikes or volcanic rocks are known in the ophilitic allochthon. The plagiogranite forms small dikes and stocks that intrude the noncumulate gabbro and consists of zoned Na-rich plagioclase + clinopyroxene with interstial quartz and biotite. Five fractions of subhedral, tan zircon from the plagiogranite yield slightly discordant U-Pb data with an upper intercept age of 170 [+-] 3 Ma. The U-Pb data indicate that the Siniktanneyak Mountain ophiolite crystallized in the Middle Jurassic and was emplaced by thrusting onto mafic accretionary prism rocks within about 10 m.y. of crystallization. The U-Pb data provide an upper limit to the age of initiation of the Brookian orogeny.

  20. Water age and stream solute dynamics at the Hubbard Brook Experimental Forest (US)

    NASA Astrophysics Data System (ADS)

    Botter, Gianluca; Benettin, Paolo; McGuire, Kevin; Rinaldo, Andrea

    2016-04-01

    The contribution discusses experimental and modeling results from a headwater catchment at the Hubbard Brook Experimental Forest (New Hampshire, USA) to explore the link between stream solute dynamics and water age. A theoretical framework based on water age dynamics, which represents a general basis for characterizing solute transport at the catchment scale, is used to model both conservative and weathering-derived solutes. Based on the available information about the hydrology of the site, an integrated transport model was developed and used to estimate the relevant hydrochemical fluxes. The model was designed to reproduce the deuterium content of streamflow and allowed for the estimate of catchment water storage and dynamic travel time distributions (TTDs). Within this framework, dissolved silicon and sodium concentration in streamflow were simulated by implementing first-order chemical kinetics based explicitly on dynamic TTD, thus upscaling local geochemical processes to catchment scale. Our results highlight the key role of water stored within the subsoil glacial material in both the short-term and long-term solute circulation at Hubbard Brook. The analysis of the results provided by the calibrated model allowed a robust estimate of the emerging concentration-discharge relationship, streamflow age distributions (including the fraction of event water) and storage size, and their evolution in time due to hydrologic variability.

  1. Structural provinces of the northeastern Brooks Range, Arctic National Wildlife Refuge, Alaska

    SciTech Connect

    Wallace, W.K.; Hanks, C.L. )

    1990-07-01

    The dominant Cenozoic structures of the northeastern Brooks Range are anticlinoria with cores of sub-Mississippian rocks, reflecting a regional north-vergent duplex with a floor thrust in the sub-Mississippian sequence and a roof thrust in the Mississippian Kayak Shale. The number of horses forming each anticlinorium and the structural style of the overlying Mississippian and younger cover sequence varies regionally, providing a basis for dividing the northeastern Brooks Range into structural provinces. In the western province, each anticlinorium contains a single horse, and shortening above the Kayak Shale was accommodated mainly by detachment folds. To the north in the Sadlerochit Mountains, the Kayak Shale is depositionally discontinuous and rocks elsewhere separated by this detachment deformed together. In the eastern province, each anticlinorium contains multiple horses, and shortening above the Kayak Shale was accommodated largely by thrust duplication of Mississippian through Triassic rocks. In the narrow central province, the Devonian Okpilak batholith was detached from its roots, internally shortened along shear zones and by penetrative strain, and transported northward. Because the Kayak Shale is locally absent, the Mississippian and younger cover sequence deformed in part penetratively along with the batholith. 13 figs.

  2. Diversifying and correlational selection on behavior toward conspecific and heterospecific competitors in brook stickleback (Culaea inconstans)

    PubMed Central

    Peiman, Kathryn S; Robinson, Beren W

    2012-01-01

    Behaviors toward heterospecifics and conspecifics may be correlated because of shared mechanisms of expression in both social contexts (nonadaptive covariation) or because correlational selection favors adaptive covariation. We evaluated these hypotheses by comparing behavior toward conspecifics and heterospecifics in brook stickleback (Culaea inconstans) from three populations sympatric with and three allopatric from a competitor, the ninespine stickleback (Pungitius pungitius). Behavioral traits were classified into three multivariate components: overt aggression, sociability, and activity. The correlation of behavior between social contexts for both overt aggression and activity varied among populations in a way unrelated to sympatry with ninespine stickleback, while mean aggression was reduced in sympatry. Correlations in allopatric populations suggest that overt aggression and activity may genetically covary between social contexts for nonadaptive reasons. Sociability was rarely correlated in allopatry but was consistently correlated in sympatry despite reduced mean sociability, suggesting that correlational selection may favor a sociability syndrome in brook stickleback when they coexist with ninespine stickleback. Thus, interspecific competition may impose diversifying selection on behavior among populations, although the causes of correlated behavior toward conspecifics and heterospecifics and whether it can evolve in one social context independent of the other may depend on the type of behavior. PMID:23139874

  3. Modeling of a theoretical stream of comet 12P/Pons-Brooks

    NASA Astrophysics Data System (ADS)

    Tomko, Dušan

    2015-12-01

    We show the modeling of the theoretical stream of the Halley type comet 12P/Pons-Brooks in a single perihelion passage that was 250P0 orbital periods in the past (the orbital period is 70.85 years). The modeled stream consisted of 10,000 particles. We followed its dynamical evolution by the numerical integration from the moment of their ejection up to present. From the total number of 10,000 particles, 1227 particles are passing around the Earth's orbit within the distance 0.05 AU. These particles have a well-defined radiant (Fig. 2) predicted on the northern sky, with a high declination (from about 61° to 81°). The subsequent identification with available meteor databases can confirm whether the meteor shower is real or not. For this purpose we used three databases: the photographical, radio-meteor, and video-meteor database. Despite the well-defined radiant, which it consists of 1227 particles, we cannot certainly confirm, that comet 12P/Pons-Brooks is a parent body of some meteor shower observable on the Earth.

  4. Chronology of ophiolite crystallization, detachment, and emplacement: Evidence from the Brooks Range, Alaska

    SciTech Connect

    Wirth, K.R.; Bird, J.M. )

    1992-01-01

    {sup 40}Ar/{sup 39}Ar data from early Middle Jurassic ophiolites (187-184 Ma) in the western Brooks Range, Alaska, indicate that detachment - related metamorphism occurred {approximately}20 m.y. after crystallization and {approximately}20 m.y. before emplacement onto the Arctic Alaska margin. High-temperature metamorphic rocks along the basal surfaces of many ophiolites have ages that are contemporaneous with ophiolite crystallization, suggesting that detachment and thrust faulting occur while the lithosphere is young ({lt}10 Ma) and relatively hot. From these relations it has been generally assumed that detachment and initial overthrusting of oceanic lithosphere occur near the site of generation, such as a marginal basin or mid-ocean ridge. The new data from the Brooks Range ophiolites confirm previous indications that some ophiolites have much longer intervals between crystallization, thrust-related metamorphism, and emplacement. On the basis of these new results and data from other ophiolites, the authors propose that ophiolites originating within large ocean basins will generally have longer crystallization-to-emplacement intervals than the more commonly recognized marginal basin-type ophiolites.

  5. High-resolution geophysical data collected within Red Brook Harbor, Buzzards Bay, Massachusetts, in 2009

    USGS Publications Warehouse

    Turecek, Aaron M.; Danforth, William W.; Baldwin, Wayne E.; Barnhardt, Walter A.

    2012-01-01

    The U.S. Geological Survey conducted a high-resolution geophysical survey within Red Brook Harbor, Massachusetts, from September 28 through November 17, 2009. Red Brook Harbor is located on the eastern edge of Buzzards Bay, south of the Cape Cod Canal. The survey area was approximately 7 square kilometers, with depths ranging from 0 to approximately 10 meters. Data were collected aboard the U.S. Geological Survey Research Vessel Rafael. The research vessel was equipped with a 234-kilohertz interferometric sonar system to collect bathymetry and backscatter data, a dual frequency (3.5- and 200-kilohertz) compression high-intensity radar pulse seismic reflection profiler to collect subbottom data, a sound velocity profiler to acquire speed of sound within the water column, and a sea floor sampling device to collect sediment samples, video, and photographs. The survey was part of an ongoing cooperative effort between the U.S. Geological Survey and the Massachusetts Office of Coastal Zone Management to map the geology of the Massachusetts inner continental shelf. In addition to inclusion within the cooperative geologic mapping effort, these data will be used to assess the shallow-water mapping capability of the geophysical systems deployed for this project, with an emphasis on identifying resolution benchmarks for the interferometric sonar system.

  6. The rise and fall of isolation by distance in the anadromous brook charr (Salvelinus fontinalis Mitchill).

    PubMed Central

    Castric, Vincent; Bernatchez, Louis

    2003-01-01

    Geographic patterns of genetic diversity depend on a species' demographic properties in a given habitat, which may change over time. The rates at which patterns of diversity respond to changes in demographic properties and approach equilibrium are therefore pivotal in our understanding of spatial patterns of diversity. The brook charr Salvelinus fontinalis is a coastal fish exhibiting limited marine movements, such that a stable one-dimensional isolation-by-distance (IBD) pattern should be observed over the whole range. Its range, however, recently shifted northward such that northern populations may still be in the process of reaching equilibrium. We investigated variation in IBD patterns, genetic divergence, and allelic richness at six microsatellite markers in 2087 anadromous brook charr from 59 rivers along the most likely postglacial colonization route. We observed a decrease in allelic richness, together with an increase in differentiation and a decrease in IBD in the most recently colonized northern populations, as expected following recent colonization. Contrary to expectation, however, similar patterns were also observed at the southernmost part of the range, despite the fact that these populations are not considered to be newly colonized. We propose that the loss of dispersal capabilities associated with anadromy may have caused the southernmost populations to evolve relatively independently of one another. This study thus demonstrated that changes in a species' geographic range and dispersal capabilities may contribute to shaping geographic patterns of genetic diversity. PMID:12663537

  7. Factors influencing successful eradication of nonnative brook trout from four small Rocky Mountain streams using electrofishing

    USGS Publications Warehouse

    Shepard, Bradley B.; Nelson, Lee M.; Taper, Mark L.; Zale, Alexander V.

    2014-01-01

    We successfully eradicated nonnative Brook Trout Salvelinus fontinalis by electrofishing from 2.4- to 3.0-km treatment reaches of four Rocky Mountain streams in Montana to conserve sympatric populations of native Westslope Cutthroat Trout Oncorhynchus clarkii lewisi. At least 6, and as many as 14, removal treatments of two to four electrofishing passes per treatment were required to successfully eradicate Brook Trout from these treatment reaches. We increased success by modifying our treatment efforts during this study from single annual treatments to several treatments a year to take advantage of autumn spawning and winter aggregating behavior. Eradication by electrofishing cost US \\$3,500 to \\$5,500 per kilometer where no riparian vegetation or woody debris clearing was necessary, increasing to \\$8,000 to \\$9,000 per kilometer where clearing was needed. Treatment costs without stream clearing were similar to costs of eradication using piscicides. Eradication by electrofishing may be preferable where native fish occur in sympatry with nonnative fish in smaller streams (base flow wetted widths

  8. Complete mitochondrial genomes of Korean lamprey (Lethenteron morii) and American brook lamprey (L. appendix).

    PubMed

    Pu, Jiafei; Ren, Jianfeng; Zhang, Zhe; Jia, Liang; Buchinger, Tyler; Li, Weiming

    2016-05-01

    The complete mitogenomes of two lampreys with complex taxonomic histories, the Korean lamprey (Lethenteron morii) and the American brook lamprey (L. appendix) were determined. Three-nt length difference between two genomes occurred on tRNA-Ser2 and control region 2. Except for 3 indel sites, there are 58 variable sites between two genomes which occurred on 11 of the 13 protein-coding genes (aside from COX3 and ND3) and 2 of rRNAs, tRNAs, control regions and intergenic regions. Among these sites, 15 sites are non-synonymous substitution sites occurred on 8 protein-coding genes including COX1-COX2, ND1-ND2, ND4-ND6 and ATPase6. Control region 1 contains 4 consecutive 39-nt repetitive strings and a 26-nt repetitive string in control region 2 is repeated 3.8 times in both lampreys. The observed level of similarity between nucleotide sequences (99.62%) implies the Korean lamprey and American brook lamprey are very close relatives and should be assigned into the same taxonomic genus.

  9. Plant communities as indicators of salt marsh hydrology A study at Goose Fare Brook, Saco, Maine

    SciTech Connect

    Millette, P.M. . Dept. of Geological Sciences)

    1993-03-01

    Salt marsh stratigraphy often relies on vegetation fragment distribution as an indicator of paleo-sea level. This study is attempting to validate the use of Spartina alterniflora and Spartina patens at Goose Fare Brook in Saco, Maine as paleo-sea level indicators. Plant zones were mapped and each zone boundary was surveyed to describe the relationship between sea level and plant species zonation. Data showing the contact elevations between S. patens and S. alterniflora were examined, and contacts from different environments in the marsh were compared. Differences in contact elevations ranged from only a few centimeters to more than eighty centimeters. Three series of groundwater monitoring wells were installed along transects. Within a single transect, one well was placed in the creek bottom, measuring the free water surface, and one was placed at each of several plant zone boundaries. Strip chart recordings from one series of monitoring wells show the flood dominated patterns of tidally influenced groundwater fluctuations in the wells. Root depths of 100 plugs each of S. alterniflora and S. patens were also measured. A comparison of these measurements and those from monitoring wells will assist in the determination of the average length of submergence time for each species. Preliminary findings suggest that sea level is not the only force affecting the modern zonation of these two indicator plants in Goose Fare Brook.

  10. NASA's Hydrogen Outpost: The Rocket Systems Area at Plum Brook Station

    NASA Technical Reports Server (NTRS)

    Arrighi, Robert S.

    2016-01-01

    "There was pretty much a general knowledge about hydrogen and its capabilities," recalled former researcher Robert Graham. "The question was, could you use it in a rocket engine? Do we have the technology to handle it? How will it cool? Will it produce so much heat release that we can't cool the engine? These were the questions that we had to address." The National Aeronautics and Space Administration's (NASA) Glenn Research Center, referred to historically as the Lewis Research Center, made a concerted effort to answer these and related questions in the 1950s and 1960s. The center played a critical role transforming hydrogen's theoretical potential into a flight-ready propellant. Since then NASA has utilized liquid hydrogen to send humans and robots to the Moon, propel dozens of spacecraft across the universe, orbit scores of satellite systems, and power 135 space shuttle flights. Rocket pioneers had recognized hydrogen's potential early on, but its extremely low boiling temperature and low density made it impracticable as a fuel. The Lewis laboratory first demonstrated that liquid hydrogen could be safely utilized in rocket and aircraft propulsion systems, then perfected techniques to store, pump, and cleanly burn the fuel, as well as use it to cool the engine. The Rocket Systems Area at Lewis's remote testing area, Plum Brook Station, played a little known, but important role in the center's hydrogen research efforts. This publication focuses on the activities at the Rocket Systems Area, but it also discusses hydrogen's role in NASA's space program and Lewis's overall hydrogen work. The Rocket Systems Area included nine physically modest test sites and three test stands dedicated to liquid-hydrogen-related research. In 1962 Cleveland Plain Dealer reporter Karl Abram claimed, "The rocket facility looks more like a petroleum refinery. Its test rigs sprout pipes, valves and tanks. During the night test runs, excess hydrogen is burned from special stacks in the best

  11. Genetic structure and diversity among brook trout from Isle Royale, Lake Nipigon, and three Minnesota tributaries of Lake Superior

    USGS Publications Warehouse

    Stott, Wendylee; Quinlan, Henry R.; Gorman, Owen T.; King, Timothy L.

    2010-01-01

    Brook trout Salvelinus fontinalis from Isle Royale, Michigan, three Minnesota tributaries of Lake Superior, and Lake Nipigon in Ontario were analyzed for genetic variation at 12 microsatellite DNA loci. Analysis of molecular variance, genetic distance measures, and cluster analysis were used to examine the diversity, gene flow, and relatedness among the samples. The diversity estimates for the samples from Isle Royale were similar to those for the samples collected from Minnesota tributaries of Lake Superior, and all estimates were lower than those reported in other studies of brook trout from eastern North America. Genetic differences were detected among the brook trout at Isle Royale, Lake Nipigon, and the Minnesota tributaries of Lake Superior. Further, the population in Tobin Harbor at the eastern end of Isle Royale was distinct from the populations from tributaries at the southwestern end of the island. The Minnesota tributary population formed a group that was genetically distinct from those from Isle Royale and Lake Nipigon. The Isle Royale population should be managed to preserve the genetic and phenotypic variation that distinguishes it from the other brook trout populations analyzed to date.

  12. SEX-LINKED CHANGES IN PHASE 1 BIOTRANSFORMATION OF PHENOL IN BROOK TROUT OVER AN ANNUAL REPRODUCTIVE CYCLE

    EPA Science Inventory

    The microsomal metabolism of phenol (11 degrees C) over an annual reproductive cycle from June to December has been studied using fall spawning adult brook trout (Salvelinus fontinalis). Incubations were optimized for time, cofactor connection, pH, and microsomal protein concentr...

  13. The Stories of Nico and Brooke Revisited: Toward a Cross-Disciplinary Dialogue about Teaching and Learning

    ERIC Educational Resources Information Center

    Immordino-Yang, Mary Helen

    2008-01-01

    In "A tale of two cases: Lessons for education from the study of two boys living with half their brains" (M. H. Immordino-Yang, 2007), I showed that Nico (missing his right cerebral hemisphere) and Brooke (missing his left) had compensated for basic neuropsychological skills to previously unexpected degrees and argued that the ways they had…

  14. Examining Scientific and Technical Writing Strategies in the 11th Century Chinese Science Book "Brush Talks from Dream Brook"

    ERIC Educational Resources Information Center

    Zhang, Yuejiao

    2013-01-01

    This article examines the influential Chinese science book "Brush Talks from Dream Brook," written by Shen Kuo in the 11th century. I suggest that "Brush Talks" reveals a tension between institutionalized science and science in the public, and a gap between the making of scientific knowledge and the communication of such…

  15. Genetic identity of brook trout in Lake Superior south shore streams: Potential for genetic monitoring of stocking and rehabilitation efforts

    USGS Publications Warehouse

    Sloss, Brian L.; Jennings, Martin J.; Franckowiak, R.; Pratt, D.M.

    2008-01-01

    Rehabilitation of migratory ('coaster') brook trout Salvelinus fontinalis along Lake Superior's south shore is a topic of high interest among resource stakeholders and management agencies. Proposed strategies for rehabilitation of this brook trout life history variant in Wisconsin include supplemental stocking, watershed management, habitat rehabilitation, harvest regulations, or a combination thereof. In an effort to evaluate the success of coaster brook trout rehabilitation efforts, we collected genetic data from four populations of interest (Whittlesey Creek, Bois Brule River, Bark River, and Graveyard Creek) and the hatchery sources used in the Whittlesey Creek supplementation experiment. We characterized the genetic diversity of 30 individuals from each of four populations using 13 microsatellite DNA loci. Levels of genetic variation were consistent with those in similar studies conducted throughout the basin. Significant genetic variation among the populations was observed, enabling adequate population delineation through assignment tests. Overall, 208 of the 211 sampled fish (98.6%) were correctly assigned to their population of origin. Simulated F1 hybrids between two hatchery strains and the Whittlesey Creek population were identifiable in the majority of attempts (90.5-100% accuracy with 0-2.5% error). The genetic markers and analytical techniques described provide the ability to monitor the concurrent coaster brook trout rehabilitation efforts along Wisconsin's Lake Superior south shore, including the detection of hybridization between hatchery and native populations. ?? Copyright by the American Fisheries Society 2008.

  16. Media Literacy, News Literacy, or News Appreciation? A Case Study of the News Literacy Program at Stony Brook University

    ERIC Educational Resources Information Center

    Fleming, Jennifer

    2014-01-01

    This case study provides practical and theoretical insights into the Stony Brook news literacy program, which is one of the most ambitious and well-funded curricular experiments in modern journalism education and media literacy. Analysis of document, interview, and observation data indicates that news literacy educators sought to teach students…

  17. What Do Facts Have to Do with It? Exploring Instructional Emphasis in Stony Brook News Literacy Curriculum

    ERIC Educational Resources Information Center

    Fleming, Jennifer

    2015-01-01

    An analytic matrix comprised of multiple media literacy teaching and learning principles is conceptualized to examine a model of news literacy developed by journalism educators at Stony Brook University. The multidimensional analysis indicates that news literacy instructors focus on teaching students how to question and assess the veracity of news…

  18. 75 FR 52374 - National Environmental Policy Act; NASA Glenn Research Center Plum Brook Station Wind Farm Project

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-08-25

    ... Wind Farm Project AGENCY: National Aeronautics and Space Administration. ACTION: Notice of Intent to... GRC Plum Brook Station Wind Farm Project located near Sandusky, Ohio, pursuant to the National... and operation of the wind farm. The purpose of constructing and operating the wind farm is for NASA...

  19. Performance Characterization of Influent and Effluent Treatment Systems: A Case Study at Craig Brook National Fish Hatchery

    Technology Transfer Automated Retrieval System (TEKTRAN)

    This study characterizes the performance of influent and effluent disinfection systems at Craig Brook National Fish Hatchery, a U.S. Fish and Wildlife Service (USFWS) Atlantic salmon (Salmo salar) restoration facility in East Orland, ME. Influent treatment of the hatchery’s water supply limits fish ...

  20. On Conceptual Metaphor and the Flora and Fauna of Mind: Commentary on Brookes and Etkina; and Jeppsson, Haglund, and Amin

    ERIC Educational Resources Information Center

    Sherin, Bruce

    2015-01-01

    In this commentary, the author presents his thoughts on two papers appearing in this special issue. The first, "The Importance of Language in Students' Reasoning about Heat in Thermodynamic Processes," by David T. Brookes and Eugenia Etkina (See: EJ1060728), and the second, "Varying Use of Conceptual Metaphors Across Levels of…

  1. Brief Report: Stony Brook Guidelines on the Ethics of the Care of People with Autism and Their Families

    ERIC Educational Resources Information Center

    Post, Stephen G.; Pomeroy, John; Keirns, Carla C.; Cover, Virginia Isaacs; Dorn, Michael Leverett; Boroson, Louis; Boroson, Florence; Coulehan, Anne; Coulehan, Jack; Covell, Kim; Kubasek, Kim; Luchsinger, Elizabeth; Nichols, Shana; Parles, James; Schreiber, Linda; Tetenbaum, Samara P.; Walsh, Rose Ann

    2013-01-01

    The increased prevalence of autism spectrum disorders (ASD), with associated societal and clinical impacts, calls for a broad community-based dialogue on treatment related ethical and social issues. The Stony Brook Guidelines, based on a community dialogue process with affected individuals, families and professionals, identify and discuss the…

  2. Growth of a Science Center: The Center for Science and Mathematics Education (CESAME) at Stony Brook University

    ERIC Educational Resources Information Center

    Gafney, Leo; Bynum, R. David; Sheppard, Keith

    2015-01-01

    This report describes the origin and development of CESAME (The Center for Science and Mathematics Education) at Stony Brook University. The analysis identifies key ingredients in areas of personnel, funding, organizational structures, educational priorities, collaboration, and institutionalization. After a discussion of relevant issues in…

  3. Drought-induced stomatal closure probably cannot explain divergent white spruce growth in the Brooks Range, Alaska, USA.

    PubMed

    Brownlee, Annalis H; Sullivan, Patrick F; Csank, Adam Z; Sveinbjörnsson, Bjartmar; Ellison, Sarah B Z

    2016-01-01

    Increment cores from the boreal forest have long been used to reconstruct past climates. However, in recent years, numerous studies have revealed a deterioration of the correlation between temperature and tree growth that is commonly referred to as divergence. In the Brooks Range of northern Alaska, USA, studies of white spruce (Picea glauca) revealed that trees in the west generally showed positive growth trends, while trees in the central and eastern Brooks Range showed mixed and negative trends during late 20th century warming. The growing season climate of the eastern Brooks Range is thought to be drier than the west. On this basis, divergent tree growth in the eastern Brooks Range has been attributed to drought stress. To investigate the hypothesis that drought-induced stomatal closure can explain divergence in the Brooks Range, we synthesized all of the Brooks Range white spruce data available in the International Tree Ring Data Bank (ITRDB) and collected increment cores from our primary sites in each of four watersheds along a west-to-east gradient near the Arctic treeline. For cores from our sites, we measured ring widths and calculated carbon isotope discrimination (δ13C), intrinsic water-use efficiency (iWUE), and needle intercellular CO2 concentration (C(i)) from δ13C in tree-ring alpha-cellulose. We hypothesized that trees exhibiting divergence would show a corresponding decline in δ13C, a decline in C(i), and a strong increase in iWUE. Consistent with the ITRDB data, trees at our western and central sites generally showed an increase in the strength of the temperature-growth correlation during late 20th century warming, while trees at our eastern site showed strong divergence. Divergent tree growth was not, however, associated with declining δ13C. Meanwhile, estimates of C(i) showed a strong increase at all of our study sites, indicating that more substrate was available for photosynthesis in the early 21st than in the early 20th century. Our

  4. Drought-induced stomatal closure probably cannot explain divergent white spruce growth in the Brooks Range, Alaska, USA.

    PubMed

    Brownlee, Annalis H; Sullivan, Patrick F; Csank, Adam Z; Sveinbjörnsson, Bjartmar; Ellison, Sarah B Z

    2016-01-01

    Increment cores from the boreal forest have long been used to reconstruct past climates. However, in recent years, numerous studies have revealed a deterioration of the correlation between temperature and tree growth that is commonly referred to as divergence. In the Brooks Range of northern Alaska, USA, studies of white spruce (Picea glauca) revealed that trees in the west generally showed positive growth trends, while trees in the central and eastern Brooks Range showed mixed and negative trends during late 20th century warming. The growing season climate of the eastern Brooks Range is thought to be drier than the west. On this basis, divergent tree growth in the eastern Brooks Range has been attributed to drought stress. To investigate the hypothesis that drought-induced stomatal closure can explain divergence in the Brooks Range, we synthesized all of the Brooks Range white spruce data available in the International Tree Ring Data Bank (ITRDB) and collected increment cores from our primary sites in each of four watersheds along a west-to-east gradient near the Arctic treeline. For cores from our sites, we measured ring widths and calculated carbon isotope discrimination (δ13C), intrinsic water-use efficiency (iWUE), and needle intercellular CO2 concentration (C(i)) from δ13C in tree-ring alpha-cellulose. We hypothesized that trees exhibiting divergence would show a corresponding decline in δ13C, a decline in C(i), and a strong increase in iWUE. Consistent with the ITRDB data, trees at our western and central sites generally showed an increase in the strength of the temperature-growth correlation during late 20th century warming, while trees at our eastern site showed strong divergence. Divergent tree growth was not, however, associated with declining δ13C. Meanwhile, estimates of C(i) showed a strong increase at all of our study sites, indicating that more substrate was available for photosynthesis in the early 21st than in the early 20th century. Our

  5. Context-specific influence of water temperature on brook trout growth rates in the field

    USGS Publications Warehouse

    Xu, C.; Letcher, B.H.; Nislow, K.H.

    2010-01-01

    1. Modelling the effects of climate change on freshwater fishes requires robust field-based estimates accounting for interactions among multiple factors.2. We used data from an 8-year individual-based study of a wild brook trout (Salvelinus fontinalis) population to test the influence of water temperature on season-specific growth in the context of variation in other environmental (i.e. season, stream flow) or biotic factors (local brook trout biomass density and fish age and size) in West Brook, a third-order stream in western Massachusetts, U.S.A.3. Changes in ambient temperature influenced individual growth rates. In general, higher temperatures were associated with higher growth rates in winter and spring and lower growth rates in summer and autumn. However, the effect of temperature on growth was strongly context-dependent, differing in both magnitude and direction as a function of season, stream flow and fish biomass density.4. We found that stream flow and temperature had strong and complex interactive effects on trout growth. At the coldest temperatures (in winter), high stream flows were associated with reduced trout growth rates. During spring and autumn and in typical summers (when water temperatures were close to growth optima), higher flows were associated with increased growth rates. In addition, the effect of flow at a given temperature (the flow-temperature interaction) differed among seasons.5. Trout density negatively affected growth rate and had strong interactions with temperature in two of four seasons (i.e. spring and summer) with greater negative effects at high temperatures.6. Our study provided robust, integrative field-based estimates of the effects of temperature on growth rates for a species which serves as a model organism for cold-water adapted ectotherms facing the consequences of environmental change. Results of the study strongly suggest that failure to derive season-specific estimates, or to explicitly consider interactions with

  6. Mortality of brook trout, mottled sculpins, and slimy sculpins during acidic episodes

    SciTech Connect

    Gagen, C.J.; Sharpe, W.E.; Carline, R.F. )

    1993-07-01

    Brook trout Salvelinus fontinalis, mottled sculpins Cottus bairdi, and slimy sculpins Cottus cognatus occur in many Pennsylvania streams that have depressed pH and elevated aluminum concentrations during episodes of high stream discharge (acidic episodes). We performed 20-d in situ cage exposures with these species to determine their relative sensitivities to field conditions. We also exposed fish in the laboratory to synthetic soft water, without added Al, to elevate possible effects of Al on sodium flux rates and pH toxicity. Exposures were in five streams: two with high pH (>5.60) and low Al concentrations (<80 [mu]g/L) and three with low pH (usually between 5.0 and 5.5) and high Al levels (124-294 [mu]g/L). Exposures were during two low-discharge fall periods, when pH tends to be seasonally higher and Al concentrations lower, and two relatively high-discharge spring seasons, when lower pH and higher Al concentrations are typical. Few fish died (generally <10%) in the two streams that had higher pH and lower al concentrations, whereas mortalities typically exceeded 20% and were as high as 100% during spring exposures in the streams with lower pH and elevated Al concentrations. All three species had higher mortality rates in spring, 20-100%, than in fall, 0-29%. Mottled sculpins and slimy sculpins had similar mortality rates and both had lower mortality rates than brook trout when exposed to similar conditions. We compared Na flux rates of mottled sculpins to those of brook trout in laboratory exposures at pH 4.0, 5.0, and 6.0 to determine if low pH alone could account for mortality rates in the field. Because Na flux rates at pH 5.0, without added Al, were similar to flux rates of the controls for both species, high Al levels were believed to have contributed to the increased mortality observed in streams. 44 refs., 7 figs., 3 tabs.

  7. Deformation and the timing of gas generation and migration in the eastern Brooks Range foothills, Arctic National Wildlife Refuge, Alaska

    USGS Publications Warehouse

    Parris, T.M.; Burruss, R.C.; O'Sullivan, P. B.

    2003-01-01

    Along the southeast border of the 1002 Assessment Area in the Arctic National Wildlife Refuge, Alaska, an explicit link between gas generation and deformation in the Brooks Range fold and thrust belt is provided through petrographic, fluid inclusion, and stable isotope analyses of fracture cements integrated with zircon fission-track data. Predominantly quartz-cemented fractures, collected from thrusted Triassic and Jurassic rocks, contain crack-seal textures, healed microcracks, and curved crystals and fluid inclusion populations, which suggest that cement growth occurred before, during, and after deformation. Fluid inclusion homogenization temperatures (175-250??C) and temperature trends in fracture samples suggest that cements grew at 7-10 km depth during the transition from burial to uplift and during early uplift. CH4-rich (dry gas) inclusions in the Shublik Formation and Kingak Shale are consistent with inclusion entrapment at high thermal maturity for these source rocks. Pressure modeling of these CH4-rich inclusions suggests that pore fluids were overpressured during fracture cementation. Zircon fission-track data in the area record postdeposition denudation associated with early Brooks Range deformation at 64 ?? 3 Ma. With a closure temperature of 225-240??C, the zircon fission-track data overlap homogenization temperatures of coeval aqueous inclusions and inclusions containing dry gas in Kingak and Shublik fracture cements. This critical time-temperature relationship suggests that fracture cementation occurred during early Brooks Range deformation. Dry gas inclusions suggest that Shublik and Kingak source rocks had exceeded peak oil and gas generation temperatures at the time structural traps formed during early Brooks Range deformation. The timing of hydrocarbon generation with respect to deformation therefore represents an important exploration risk for gas exploration in this part of the Brooks Range fold and thrust belt. The persistence of gas high at

  8. Total mitochondrial genome of mantis shrimp, Squilloides leptosquilla (Brooks, 1886) (Crustacea: Stomatopoda: Squillidae) in Korean waters.

    PubMed

    Kang, Hye-Eun; Kim, Jung Nyun; Yoon, Tae-Ho; Park, Kyeong Dong; Park, Won Gyu; Park, Hyun; Kim, Hyun Woo

    2016-07-01

    We characterized the complete mitochondrial genome of Squilloides leptosquilla (Brooks, 1886) collected from the southern waters of Korea, which is newly recorded into the Korean carcinological fauna. The total mitochondrial genome length of S. leptosquilla was 16,376 bp. This circular DNA encodes 13 proteins, two ribosomal RNAs, and 22 transfer RNAs, as well as a putative control region. Compared with other decapod crustacean mitochondrial genomes, the overall A + T content was relatively high (71.1%) as those among other stomatopod species. Nine and four protein-coding genes are encoded on the H-strand and on the L-strand, respectively. The short non-coding region (210 bp) between tRNA(Glu) and tRNA(Phe) may be the good candidate as the molecular marker to discriminate S. leptosequilla from other stomatopods.

  9. Hydrography and population genetic structure in brook charr (Salvelinus fontinalis, Mitchill) from eastern Canada.

    PubMed

    Hébert, C; Danzman, R G; Jones, M W; Bernatchez, L

    2000-07-01

    Despite the abundance of studies of genetic diversity in freshwater fishes, few have specifically addressed the role of habitat structure in partitioning genetic variance within and among populations. In this study, we analysed the variability of six microsatellite loci among 24 brook charr population samples in order to correlate hydrographic structure with genetic organization. These populations originated from three Canadian National parks (Kouchibouguac, Fundy and Forillon) that showed distinct hydrographic structure. Considering the general characteristics of these habitats, we formulated specific hypotheses in regard to genetic structure, which were principally based on the potential for gene flow and population size associated with each habitat. The hierarchical analysis of molecular variance and the genetic distances computed among populations revealed that habitat structure analyses constitute an important, but insufficient, predictor of genetic structure. We discuss the importance of habitat complexity on genetic structure in the context of management and conservation.

  10. Stream ecosystem response to chronic deposition of N and acid at the Bear Brook Watershed, Maine.

    PubMed

    Simon, Kevin S; Chadwick, Michael A; Huryn, Alexander D; Valett, H Maurice

    2010-12-01

    The Bear Brook Watershed in Maine (BBWM) is a long-term, paired watershed experiment that addresses the effects of acid and nitrogen (N) deposition on whole watersheds. To examine stream response at BBWM, we synthesized data on organic matter dynamics, including leaf breakdown rates, organic matter inputs and standing stocks, macroinvertebrate secondary production, and nutrient uptake in treated and reference streams at the BBWM. While N concentrations in stream water and leaves have increased, the input, standing stocks, and breakdown rates of leaves, as well as macroinvertebrate production, were not responsive to acid and N deposition. Both chronic and acute increases of N availability have saturated uptake of nitrate in the streams. Recent experimental increases in phosphorus (P) availability enhanced stream capacity to take up nitrate and altered the character of N saturation. These results show how the interactive effects of multiple factors, including environmental flow regime, acidification, and P availability, may constrain stream response to chronic N deposition.

  11. Restoration of the Hypersonic Tunnel Facility at NASA Glenn Research Center, Plum Brook Station

    NASA Technical Reports Server (NTRS)

    Woodling, Mark A.

    2000-01-01

    The NASA Glenn Research Center's Hypersonic Tunnel Facility (HTF), located at the Plum Brook Station in Sandusky, Ohio, is a non-vitiated, free-jet facility, capable of testing large-scale propulsion systems at Mach Numbers from 5 to 7. As a result of a component failure in September of 1996, a restoration project was initiated in mid- 1997 to repair the damage to the facility. Following the 2-1/2 year effort, the HTF has been returned to an operational condition. Significant repairs and operational improvements have been implemented in order to ensure facility reliability and personnel safety. As of January 2000, this unique, state-of-the-art facility was ready for integrated systems testing.

  12. Concomitant Antibiotic and Mercury Resistance Among Gastrointestinal Microflora of Feral Brook Trout, Salvelinus fontinalis

    PubMed Central

    Meredith, Matthew M.; Parry, Erin M.; Guay, Justin A.; Markham, Nicholas O.; Danner, G. Russell; Johnson, Keith A.; Barkay, Tamar; Fekete, Frank A.

    2013-01-01

    Twenty-nine bacterial isolates representing eight genera from the gastrointestinal tracts of feral brook trout Salvelinus fontinalis (Mitchell) demonstrated multiple maximal antibiotic resistances and concomitant broad-spectrum mercury (Hg) resistance. Equivalent viable plate counts on tryptic soy agar supplemented with either 0 or 25 μM HgCl2 verified the ubiquity of mercury resistance in this microbial environment. Mercury levels in lake water samples measured 1.5 ng L−1; mercury concentrations in fish filets ranged from 81.8 to 1,080 ng g−1 and correlated with fish length. The presence of similar antibiotic and Hg resistance patterns in multiple genera of gastrointestinal microflora supports a growing body of research that multiple selective genes can be transferred horizontally in the presence of an unrelated individual selective pressure. We present data that bioaccumulation of non-point source Hg pollution could be a selective pressure to accumulate both antibiotic and Hg resistant bacteria. PMID:22850694

  13. Total mitochondrial genome of mantis shrimp, Squilloides leptosquilla (Brooks, 1886) (Crustacea: Stomatopoda: Squillidae) in Korean waters.

    PubMed

    Kang, Hye-Eun; Kim, Jung Nyun; Yoon, Tae-Ho; Park, Kyeong Dong; Park, Won Gyu; Park, Hyun; Kim, Hyun Woo

    2016-07-01

    We characterized the complete mitochondrial genome of Squilloides leptosquilla (Brooks, 1886) collected from the southern waters of Korea, which is newly recorded into the Korean carcinological fauna. The total mitochondrial genome length of S. leptosquilla was 16,376 bp. This circular DNA encodes 13 proteins, two ribosomal RNAs, and 22 transfer RNAs, as well as a putative control region. Compared with other decapod crustacean mitochondrial genomes, the overall A + T content was relatively high (71.1%) as those among other stomatopod species. Nine and four protein-coding genes are encoded on the H-strand and on the L-strand, respectively. The short non-coding region (210 bp) between tRNA(Glu) and tRNA(Phe) may be the good candidate as the molecular marker to discriminate S. leptosequilla from other stomatopods. PMID:26176982

  14. Do native brown trout and non-native brook trout interact reproductively?

    NASA Astrophysics Data System (ADS)

    Cucherousset, J.; Aymes, J. C.; Poulet, N.; Santoul, F.; Céréghino, R.

    2008-07-01

    Reproductive interactions between native and non-native species of fish have received little attention compared to other types of interactions such as predation or competition for food and habitat. We studied the reproductive interactions between non-native brook trout ( Salvelinus fontinalis) and native brown trout ( Salmo trutta) in a Pyrenees Mountain stream (SW France). We found evidence of significant interspecific interactions owing to consistent spatial and temporal overlap in redd localizations and spawning periods. We observed mixed spawning groups composed of the two species, interspecific subordinate males, and presence of natural hybrids (tiger trout). These reproductive interactions could be detrimental to the reproduction success of both species. Our study shows that non-native species might have detrimental effects on native species via subtle hybridization behavior.

  15. Structural geology of the Big Bend anticline, Brooks Range Foothills, Alaska

    NASA Astrophysics Data System (ADS)

    Sanders, Cheryl M.

    Big Bend anticline is near the northern edge of the Brooks Range foothills of northern Alaska. The structure of the foothills is a low-taper triangle zone or passive-roof duplex within Brooks Range foreland basin deposits. The dominant structures are detachment folds locally cut by thrust faults and Big Bend anticline is one of these. This research combines detailed surface mapping (1:25,000) with interpretation of aerial photos and satellite imagery of the Big Bend anticline and seismic reflection data from the Umiat anticline to reconstruct its surface and subsurface geometry. The research area surrounds the Big Bend of the Chandler River and covers approximately 10 km2. The mechanical stratigraphy of the area consists of the competent Nanushuk sandstones between two incompetent units-the overlying Seabee and underlying Torok shales. The structure of the area consists of an east-trending anticline with a hinge that branches westward into two open, broad anticlines and an intervening syncline. A forethrust near the southern hinge and a backthrust near the northern hinge have broken through the anticline west of the branch point. Subsurface data of Umiat anticline combined with surface projected cross sections from the study area provide an analog of the subsurface structure in the Big Bend area. These cross sections show gentle anticlines separated by flat bottomed synclines in competent Nanushuk Formation sandstone. The anticlines overly Torok Formation thickened by north vergent folds and thrust faults above a detachment zone. Collectively, these structures form a low-taper triangle zone. Cross section restoration suggests more shortening in the Torok duplex than in the overlying folds and breakthrough faults. Results of this research provide an analog for other anticlines in the region that are currently the focus of oil and gas exploration.

  16. Neocomian source and reservoir rocks in the western Brooks Range and Arctic Slope, Alaska

    SciTech Connect

    Mull, C.G.; Reifenstuhl, R.R.; Harris, E.E.; Crowder, R.K.

    1995-04-01

    Detailed (1:63,360) mapping of the Tingmerkpuk sandstone and associated rocks in the Misheguk Mountain and DeLong Mountains guadrangles of the western Brooks Range thrust belt documents potential hydrocarbon source and reservoir rocks in the northern foothills of the western Delong Mountains and adjacent Colville basin of northwest Alaska. Neocomian (?) to Albian micaceous shale, litharenite, and graywacke that overlies the Tingmerkpuk represents the onset of deposition of orogenic sediments derived from the Brooks Range to the south, and the merging of northern and southern sediment sources in the Colville basin. Both the proximal and distal Tingmerkpuk facies contain clay shale interbeds and overlie the Upper Jurassic to Neocomian Kingak Shale. Preliminary geochemical data show that in the thrust belt, these shales are thermally overmature (Ro 1.4-1.6), but are good source rocks with total organic content (TOC) that ranges from 1.2 to 1.8 percent. Shale in the overlying Brookian rocks is also thermally overmature (Ro 1.2-1.5 percent), but contains up to 1.8 percent TOC from a dominantly terrigenous source, and has generated gas. In outcrops at Surprise Creek, in the foothills north of the thrust belt, the Kingak (1.9 percent TOC) and underlying Triassic Shublik Formation (4.6 percent TOC) are excellent oil source rocks with thermal maturity close to peak oil generation stage (Ro0.75-0.9 percent). These rocks have lower thermal maturity values than expected for their stratigraphic position within the deeper parts of the Colville basin and indicate anomalous burial and uplift history in parts of the basin. Preliminary apatite fission-track (AFTA) data from the thrust belt indicate a stage of rapid uplift and cooling at about 53.61 Ma.

  17. The Wageningen Lowland Runoff Simulator (WALRUS): application to the Hupsel Brook catchment and Cabauw polder

    NASA Astrophysics Data System (ADS)

    Brauer, C. C.; Torfs, P. J. J. F.; Teuling, A. J.; Uijlenhoet, R.

    2014-02-01

    The Wageningen Lowland Runoff Simulator (WALRUS) is a new parametric (conceptual) rainfall-runoff model which accounts explicitly for processes that are important in lowland areas, such as groundwater-unsaturated zone coupling, wetness-dependent flowroutes, groundwater-surface water feedbacks, and seepage and surface water supply (see companion paper by Brauer et al., 2014). Lowland catchments can be divided into slightly sloping, freely draining catchments and flat polders with controlled water levels. Here, we apply WALRUS to two contrasting Dutch catchments: the Hupsel Brook catchment and Cabauw polder. In both catchments, WALRUS performs well: Nash-Sutcliffe efficiencies obtained after calibration on one year of discharge observations are 0.87 for the Hupsel Brook catchment and 0.83 for the Cabauw polder, with values of 0.74 and 0.76 for validation. The model also performs well during floods and droughts and can forecast the effect of control operations. Through the dynamic division between quick and slow flowroutes controlled by a wetness index, temporal and spatial variability in groundwater depths can be accounted for, which results in adequate simulation of discharge peaks as well as low flows. The performance of WALRUS is most sensitive to the parameter controlling the wetness index and the groundwater reservoir constant, and to a lesser extent to the quickflow reservoir constant. The effects of these three parameters can be identified in the discharge time series, which indicates that the model is not overparameterised (parsimonious). Forcing uncertainty was found to have a larger effect on modelled discharge than parameter uncertainty and uncertainty in initial conditions.

  18. The Wageningen Lowland Runoff Simulator (WALRUS): application to the Hupsel Brook catchment and the Cabauw polder

    NASA Astrophysics Data System (ADS)

    Brauer, C. C.; Torfs, P. J. J. F.; Teuling, A. J.; Uijlenhoet, R.

    2014-10-01

    The Wageningen Lowland Runoff Simulator (WALRUS) is a new parametric (conceptual) rainfall-runoff model which accounts explicitly for processes that are important in lowland areas, such as groundwater-unsaturated zone coupling, wetness-dependent flowroutes, groundwater-surface water feedbacks, and seepage and surface water supply (see companion paper by Brauer et al., 2014). Lowland catchments can be divided into slightly sloping, freely draining catchments and flat polders with controlled water levels. Here, we apply WALRUS to two contrasting Dutch catchments: the Hupsel Brook catchment and the Cabauw polder. In both catchments, WALRUS performs well: Nash-Sutcliffe efficiencies obtained after calibration on 1 year of discharge observations are 0.87 for the Hupsel Brook catchment and 0.83 for the Cabauw polder, with values of 0.74 and 0.76 for validation. The model also performs well during floods and droughts and can forecast the effect of control operations. Through the dynamic division between quick and slow flowroutes controlled by a wetness index, temporal and spatial variability in groundwater depths can be accounted for, which results in adequate simulation of discharge peaks as well as low flows. The performance of WALRUS is most sensitive to the parameter controlling the wetness index and the groundwater reservoir constant, and to a lesser extent to the quickflow reservoir constant. The effects of these three parameters can be identified in the discharge time series, which indicates that the model is not overparameterised (parsimonious). Forcing uncertainty was found to have a larger effect on modelled discharge than parameter uncertainty and uncertainty in initial conditions.

  19. Effects of dam removal on brook trout in a Wisconsin stream

    USGS Publications Warehouse

    Stanley, E.H.; Catalano, M.J.; Mercado-Silva, N.; Orr, C.H.

    2007-01-01

    Dams create barriers to fish migration and dispersal in drainage basins, and the removal of dams is often viewed as a means of increasing habitat availability and restoring migratory routes of several fish species. However, these barriers can also isolate and protect native taxa from aggressive downstream invaders. We examined fish community composition two years prior to and two years after the removal of a pair of low-head dams from Boulder Creek, Wisconsin, U.S.A. in 2003 to determine if removal of these potential barriers affected the resident population of native brook trout (Salvelinus fontinalis). Despite the presence of other taxa in the downstream reaches, and in other similar streams adjacent to the Boulder Creek (including the brown trout, Salmo trutta), no new species had colonized the Boulder Creek in the two years following dam removal. The adults catch per unit effort (CPUE) was lower and the young-of-the-year catch per unit effort (YOY CPUE) was higher in 2005 than in 2001 in all reaches, but the magnitude of these changes was substantially larger in the two dam-affected sample reaches relative to an upstream reference reach, indicating a localized effect of the removal. Total length of the adults and the YOY and the adult body condition did not vary between years or among reaches. Thus, despite changes in numbers of adults and the YOYs in some sections of the stream, the lack of new fish species invading Boulder Creek and the limited extent of population change in brook trout indicate that dam removal had a minor effect on these native salmonids in the first two years of the post-removal. Copyright ?? 2007 John Wiley & Sons, Ltd.

  20. Changes in seasonal climate outpace compensatory density-dependence in eastern brook trout

    USGS Publications Warehouse

    Bassar, Ronald D.; Letcher, Benjamin H.; Nislow, Keith H.; Whiteley, Andrew R.

    2016-01-01

    Understanding how multiple extrinsic (density-independent) factors and intrinsic (density-dependent) mechanisms influence population dynamics has become increasingly urgent in the face of rapidly changing climates. It is particularly unclear how multiple extrinsic factors with contrasting effects among seasons are related to declines in population numbers and changes in mean body size and whether there is a strong role for density-dependence. The primary goal of this study was to identify the roles of seasonal variation in climate driven environmental direct effects (mean stream flow and temperature) versus density-dependence on population size and mean body size in eastern brook trout (Salvelinus fontinalis). We use data from a 10-year capture-mark-recapture study of eastern brook trout in four streams in Western Massachusetts, USA to parameterize a discrete-time population projection model. The model integrates matrix modeling techniques used to characterize discrete population structures (age, habitat type and season) with integral projection models (IPMs) that characterize demographic rates as continuous functions of organismal traits (in this case body size). Using both stochastic and deterministic analyses we show that decreases in population size are due to changes in stream flow and temperature and that these changes are larger than what can be compensated for through density-dependent responses. We also show that the declines are due mostly to increasing mean stream temperatures decreasing the survival of the youngest age class. In contrast, increases in mean body size over the same period are the result of indirect changes in density with a lesser direct role of climate-driven environmental change.

  1. An evaluation of the precision of fin ray, otolith, and scale age determinations for brook trout

    USGS Publications Warehouse

    Stolarski, J.T.; Hartman, K.J.

    2008-01-01

    The ages of brook trout Salvelinus fontinalis are typically estimated using scales despite a lack of research documenting the effectiveness of this technique. The use of scales is often preferred because it is nonlethal and is believed to require less effort than alternative methods. To evaluate the relative effectiveness of different age estimation methodologies for brook trout, we measured the precision and processing times of scale, sagittal otolith, and pectoral fin ray age estimation techniques. Three independent readers, age bias plots, coefficients of variation (CV = 100 x SD/mean), and percent agreement (PA) were used to measure within-reader, among-structure bias and within-structure, among-reader precision. Bias was generally minimal; however, the age estimates derived from scales tended to be lower than those derived from otoliths within older (age > 2) cohorts. Otolith, fin ray, and scale age estimates were within 1 year of each other for 95% of the comparisons. The measures of precision for scales (CV = 6.59; PA = 82.30) and otoliths (CV = 7.45; PA = 81.48) suggest higher agreement between these structures than with fin rays (CV = 11.30; PA = 65.84). The mean per-sample processing times were lower for scale (13.88 min) and otolith techniques (12.23 min) than for fin ray techniques (22.68 min). The comparable processing times of scales and otoliths contradict popular belief and are probably a result of the high proportion of regenerated scales within samples and the ability to infer age from whole (as opposed to sectioned) otoliths. This research suggests that while scales produce age estimates rivaling those of otoliths for younger (age > 3) cohorts, they may be biased within older cohorts and therefore should be used with caution. ?? Copyright by the American Fisheries Society 2008.

  2. Six month EROD response pattern of dioxin-fed brook trout

    SciTech Connect

    Daniel, F.B.; Cormier, S.; Subramanian, B.; Williams, D.; Torsella, J.; Lech, J.

    1994-12-31

    Brook trout, Salvelinus fontinalis, were fed tritiated-labeled 2,3,7,8-TCDD in two phases, a 5-week loading phase beginning in early July, followed by a maintenance phase lasting until middle October. The loading phase brought the trout to the desired whole-body TCDD concentration. The maintenance phase held the whole-body TCDD level constant during growth and deputation through mid-October. Six treatment groups were defined by the following whole-body TCDD concentrations: 0.0, 75, 150, 300, 600, and 120 pg/g. Hepatic EROD activity was measured fluorometrically at two to three week intervals from July, 1993 through October 1993 and once in January, 1994. In the two highest treatment groups, both males and females had significantly elevated levels of EROD activity and responded in a dose-response fashion. The EROD values for males were significantly higher than for females and their seasonal response patterns were different. For males, the maximum EROD response was maintained from July through January. For females, EROD was elevated from July through September, declined and then increased to the highest levels in January. Results were confirmed by immunoassay of selected microsomes samples for CY1A1 with the specific antipeptide antibody, anti-trout CYP1A1{sup 277-294/KLH} using Western Blots and densitometry to detect any losses in catalytic activity. these data demonstrate the complexity of the EROD response of brook trout to dioxin and suggest that physiological conditions associated with reproduction might affect the EROD response.

  3. Brown bear response to elevated viewing structures at Brooks River, Alaska

    USGS Publications Warehouse

    DeBruyn, T.D.; Smith, T.S.; Proffitt, K.; Partridge, S.; Drummer, T.D.

    2004-01-01

    The increasing popularity of brown bear (Ursus arctos) viewing at Brooks River in Katmai National Park, Alaska has resulted in overcrowded facilities, increasing bear-human conflicts, displacement of bears from important habitats, and degradation of cultural resources. To partially address these issues, the National Park Service (NPS) constructed a 300-m-long elevated boardwalk with interconnected viewing platforms in August 2000. To determine what effects the new structures might have on individual bears, we observed bear movements and behaviors before and after construction. We used direct observations and motion-detection cameras to construct temporal-spatial profiles of bear activity. Although bear numbers were similar (59 bears in 2000 and 56 bears in 2001) and bear activity within the greater Brooks River area did not differ (P = 0.62, n = 29) between the 2 years of this study, trail crossings in the vicinity of the new structures decreased 78% (7,436 crossings in 2000 and 1,646 crossings in 2001; ??2 = 762, df = 14, P < 0.001). Bear temporal use of the boardwalk area changed such that when human use was highest, bear use was proportionally lower in the post- versus pre-construction phase (??2 = 34, df = 3, P < 0.005). Of 123 direct observations of bears approaching to pass beneath the structures, only 19.5% rerouted or avoided crossing under the structures. Bears' responses to the new structures were influenced by the behavior of visitors upon the structures. Potential management tools to minimize impacts of these structures on bears include enhanced public education regarding visitor conduct on the boardwalk, as well as visitor management and monitoring.

  4. ALPIDE, the Monolithic Active Pixel Sensor for the ALICE ITS upgrade

    NASA Astrophysics Data System (ADS)

    Mager, M.

    2016-07-01

    A new 10 m2 inner tracking system based on seven concentric layers of Monolithic Active Pixel Sensors will be installed in the ALICE experiment during the second long shutdown of LHC in 2019-2020. The monolithic pixel sensors will be fabricated in the 180 nm CMOS Imaging Sensor process of TowerJazz. The ALPIDE design takes full advantage of a particular process feature, the deep p-well, which allows for full CMOS circuitry within the pixel matrix, while at the same time retaining the full charge collection efficiency. Together with the small feature size and the availability of six metal layers, this allowed a continuously active low-power front-end to be placed into each pixel and an in-matrix sparsification circuit to be used that sends only the addresses of hit pixels to the periphery. This approach led to a power consumption of less than 40 mWcm-2, a spatial resolution of around 5 μm, a peaking time of around 2 μs, while being radiation hard to some 1013 1 MeVneq /cm2, fulfilling or exceeding the ALICE requirements. Over the last years of R & D, several prototype circuits have been used to verify radiation hardness, and to optimize pixel geometry and in-pixel front-end circuitry. The positive results led to a submission of full-scale (3 cm×1.5 cm) sensor prototypes in 2014. They are being characterized in a comprehensive campaign that also involves several irradiation and beam tests. A summary of the results obtained and prospects towards the final sensor to instrument the ALICE Inner Tracking System are given.

  5. System performance monitoring of the ALICE Data Acquisition System with Zabbix

    NASA Astrophysics Data System (ADS)

    Telesca, A.; Carena, F.; Carena, W.; Chapeland, S.; Chibante Barroso, V.; Costa, F.; Dénes, E.; Divià, R.; Fuchs, U.; Grigore, A.; Ionita, C.; Delort, C.; Simonetti, G.; Soós, C.; Vande Vyvre, P.; von Haller, B.; Alice Collaboration

    2014-06-01

    ALICE (A Large Ion Collider Experiment) is a heavy-ion detector studying the physics of strongly interacting matter and the quark-gluon plasma at the CERN LHC (Large Hadron Collider). The ALICE Data-AcQuisition (DAQ) system handles the data flow from the sub-detector electronics to the permanent data storage in the CERN computing center. The DAQ farm consists of about 1000 devices of many different types ranging from direct accessible machines to storage arrays and custom optical links. The system performance monitoring tool used during the LHC run 1 will be replaced by a new tool for run 2. This paper shows the results of an evaluation that has been conducted on six publicly available monitoring tools. The evaluation has been carried out by taking into account selection criteria such as scalability, flexibility, reliability as well as data collection methods and display. All the tools have been prototyped and evaluated according to those criteria. We will describe the considerations that have led to the selection of the Zabbix monitoring tool for the DAQ farm. The results of the tests conducted in the ALICE DAQ laboratory will be presented. In addition, the deployment of the software on the DAQ machines in terms of metrics collected and data collection methods will be described. We will illustrate how remote nodes are monitored with Zabbix by using SNMP-based agents and how DAQ specific metrics are retrieved and displayed. We will also show how the monitoring information is accessed and made available via the graphical user interface and how Zabbix communicates with the other DAQ online systems for notification and reporting.

  6. Automated Inventory and Monitoring of the ALICE HLT Cluster Resources with the SysMES Framework

    NASA Astrophysics Data System (ADS)

    Ulrich, J.; Lara, C.; Haaland, Ø.; Böttger, S.; Röhrich, D.; Kebschull, U.

    2012-12-01

    The High-Level-Trigger (HLT) cluster of the ALICE experiment is a computer cluster with about 200 nodes and 20 infrastructure machines. In its current state, the cluster consists of nearly 10 different configurations of nodes in terms of installed hardware, software and network structure. In such a heterogeneous environment with a distributed application, information about the actual configuration of the nodes is needed to automatically distribute and adjust the application accordingly. An inventory database provides a unified interface to such information. To be useful, the data in the inventory has to be up to date, complete and consistent. Manual maintenance of such databases is error-prone and data tends to become outdated. The inventory module of the ALICE HLT cluster overcomes these drawbacks by automatically updating the actual state periodically and, in contrast to existing solutions, it allows the definition of a target state for each node. A target state can simply be a fully operational state, i.e. a state without malfunctions, or a dedicated configuration of the node. The target state is then compared to the actual state to detect deviations and malfunctions which could induce severe problems when running the application. The inventory module of the ALICE HLT cluster has been integrated into the monitoring and management framework SysMES in order to use existing functionality like transactionality and monitoring infrastructure. Additionally, SysMES allows to solve detected problems automatically via its rule-system. To describe the heterogeneous environment with all its specifics, like custom hardware, the inventory module uses an object-oriented model which is based on the Common Information Model. The inventory module provides an automatically updated actual state of the cluster, detects discrepancies between the actual and the target state and is able to solve detected problems automatically. This contribution presents the current implementation

  7. The Far-UV Albedo of Steins Measured with Rosetta Alice

    NASA Astrophysics Data System (ADS)

    Feaga, Lori M.; A'Hearn, M. F.; Bertaux, J.; Feldman, P. D.; Parker, J. W.; Slater, D. C.; Steffl, A. J.; Throop, H.; Versteeg, M.; Weaver, H. A.; Keller, H. U.; Stern, S. A.

    2009-09-01

    Alice, the UV imaging spectrometer onboard Rosetta (Stern et al. 2007), has obtained the first far-ultraviolet (FUV) spectrum of an asteroid. During Rosetta's flyby of the main-belt, E-type asteroid (2867) Steins on 5 Sept. 2008, a ten minute integration of the surface of Steins was acquired. The spectrum, which averages over a variety of geometries at closest approach, shows very good signal from 850 Å to 2000 Å representing the first spectrum of an E-type asteroid below the atmospheric cutoff. We find that the FUV albedo of Steins is very low, 5%, compared to its visible albedo, 40% (Keller et al. 2009; Weissman et al. 2008; Jorda et al. 2008), as is expected from the UV behavior of many refractory materials. We also find that the albedo does not show a dramatic color variation over the FUV spectral range; however, there is a pronounced dip near 1600 Å. In addition, Alice obtained the total FUV count rate integrated with 1 second resolution during the encounter to determine the average variation of reflected FUV flux with phase angle. In comparison to the OSIRIS WAC data, Alice data show clear wavelength dependent phase reddening and a larger opposition effect in the FUV than in the visible. FUV spectra of several minerals are being measured in the laboratory to compare with the Steins spectrum in order to shed light on the composition of the E-type asteroid. We thank the Rosetta project team for thoughtful discussion and sharing data. This work is funded by NASA through a contract with JPL and subcontracts to SwRI, UMD, JHU, and JHU-APL.

  8. Alice Vance ("Das Bärenweib"): a historical case of Nievergelt syndrome.

    PubMed

    Urban, M; Krüger, S

    1998-03-01

    Several malformed individuals were presented at the World Exhibition in Antwerp in 1894. Among them was Mrs. Alice Vance from Mount Pleasant, Texas, with congenital limb defects, and Mr. Eugen Berry, who had asymmetrical, monstrous enlargement and macrodactyly of the feet, i.e., Proteus syndrome. After the World Exhibition Mrs. Vance presented herself to the public in Castan's Panopticon imitating a bear. She became famous under the stage name "Das Bärenweib" ("the bear-like woman") and was examined by several German clinicians, and her malformations were considered to be of high scientific interest. Mrs. Vance had mesomelic dwarfism and her mother was known to have similar malformations. Her limb deficiencies were generally considered a unique congenital condition those days, and the diagnosis of "a maternally inherited malformation of the forearms and the shanks" [Daffner 1898: Munch Med Wochenschr 25:782] was made. Virchow [1897: Verh Berl Ges Ethnol Urgeschichte 29:624], feeling attacked by a daily newspaper stating that the physicians as well as the police of Berlin had missed the diagnosis of an "English disease," eventually exercised his authority and diagnosed Alice Vance as a "phocomelic." Clearly, she was not a phocomelic according to past and current definition of this term. Thus, from a historical point of view, the story illustrates how pressure from the daily press altered the definition of an up-to-then precisely defined medical term for decades. According to the clinical data and an X-ray report available from the literature, Alice Vance had a dominantly inherited type of mesomelic dwarfism. We propose the diagnosis of Nievergelt syndrome. PMID:9511977

  9. First performance results of the ALICE TPC Readout Control Unit 2

    NASA Astrophysics Data System (ADS)

    Zhao, C.; Alme, J.; Alt, T.; Appelshäuser, H.; Bratrud, L.; Castro, A.; Costa, F.; David, E.; Gunji, T.; Kirsch, S.; Kiss, T.; Langøy, R.; Lien, J.; Lippmann, C.; Oskarsson, A.; Rehman, A. Ur; Røed, K.; Röhrich, D.; Sekiguchi, Y.; Stuart, M.; Ullaland, K.; Velure, A.; Yang, S.; Österman, L.

    2016-01-01

    This paper presents the first performance results of the ALICE TPC Readout Control Unit 2 (RCU2). With the upgraded hardware typology and the new readout scheme in FPGA design, the RCU2 is designed to achieve twice the readout speed of the present Readout Control Unit. Design choices such as using the flash-based Microsemi Smartfusion2 FPGA and applying mitigation techniques in interfaces and FPGA design ensure a high degree of radiation tolerance. This paper presents the system level irradiation test results as well as the first commissioning results of the RCU2. Furthermore, it will be concluded with a discussion of the planned updates in firmware.

  10. First irradiation tests results of the ALICE TPC Readout Control Unit 2

    NASA Astrophysics Data System (ADS)

    Zhao, C.; Røed, K.; Alme, J.; Costa, F.; Lippmann, C.; Rehman, A. Ur; Nikolai Torsvik, I.; Kiss, T.; David, E.; Velure, A.; Bratrud, L.; Torgersen, C.; Röhrich, D.; Ullaland, K.

    2015-01-01

    This paper will present the first results from irradiation tests performed on the ALICE TPC Readout Control Unit 2 (RCU2). The RCU2 is developed in order to double the readout speed with respect to the present RCU1, which then will fulfil the requirements for LHC RUN2. While the present RCU1 is based on an SRAM based FPGA, whose configuration memory has shown to be sensitive to single event upsets, the newly released Flash-based Smartfusion2 FPGA from Microsemi has been chosen for the RCU2.

  11. 'Alice in Wonderland' syndrome and Lilliputian hallucinations in a patient with a substance-related disorder.

    PubMed

    Takaoka, K; Takata, T

    1999-01-01

    The present paper describes a patient who exhibited 'Alice in Wonderland' (AIW) syndrome as well as Lilliputian hallucinations. The patient regularly consumed a cough syrup that contained dihydrocodein phosphate and dl-methylephedrine hydrochloride over 3 years. At the age of 46, he developed AIW syndrome. The patient ingested a large dose of triazolam and exhibited delirium. Even after the disappearance of symptoms associated with AIW syndrome and delirium, the patient continued to experience Lilliputian hallucinations. We believe that these hallucinations were caused by some of the components of the cough syrup. PMID:9885400

  12. 'Alice in Wonderland' syndrome as a precursor of delusional misidentification syndromes.

    PubMed

    Takaoka Norikatsu Ikawa Nobuya Niwa, K

    2001-01-01

    The present paper describes a case of abuse of toluene-based solvent in which features of both 'Alice in Wonderland' (AIW) syndrome with déjá vu , and delusional misidentification syndromes (DMS), were exhibited. Toluene-induced brain dysfunction was the basis of the weak ties between percepts and sensory information, which in turn led to the misperceptions. Once misperceptions fed back into the cycle comprised of misperceptions, false beliefs and erroneous expectations, DMS were induced. AIW syndrome with déjá vu is a precursor and forms the basis of DMS. PMID:24931791

  13. Alice in Wonderland syndrome in H1N1 influenza: case report.

    PubMed

    Augarten, Arie; Aderka, Dan

    2011-02-01

    The different aspects of the global H1N1 influenza and its complications are currently of great interest. Neurological complications of the disease and its frequency are still unknown. We report a case of an 11-year-old girl who developed Alice in Wonderland syndrome associated with H1N1 influenza. This unique clinical syndrome was previously described in other diseases. The clinician's awareness of the existence of this syndrome in H1N1 influenza might save the child from undergoing extensive diagnostic procedures. PMID:21293218

  14. An illness in the family: Dr. Maude Abbott and her sister, Alice Abbott.

    PubMed

    Brookes, Barbara

    2011-01-01

    This paper explores Maude Abbott's internationally significant career in medicine and her parallel commitment to caring for her sister, Alice Abbott. An examination of Abbott's life reveals the difficulties faced by an ambitious Canadian woman in medicine from the 1890s to the 1920s; difficulties compounded by caring for a sister with a mental illness. The Abbott archive suggests that it was far more difficult for a woman doctor to make the kind of sharp distinction between public and private life that might be expected of professional men.

  15. Observation of light nuclei at ALICE and the X (3872 ) conundrum

    NASA Astrophysics Data System (ADS)

    Esposito, A.; Guerrieri, A. L.; Maiani, L.; Piccinini, F.; Pilloni, A.; Polosa, A. D.; Riquer, V.

    2015-08-01

    The new data reported by ALICE on the production of light nuclei with p⊥≲10 GeV in Pb-Pb collisions at √{sNN }=2.76 TeV are used to compute an order-of-magnitude estimate of the expected production cross sections of light nuclei in proton-proton collisions at high transverse momenta. We compare the hypertriton, helium-3, and deuteron production cross sections to that of X (3872 ), measured in prompt p p collisions by CMS. The results we find suggest a different production mechanism for the X (3872 ), making questionable any loosely bound molecule interpretation.

  16. Dust Outbursts From Comet 67P/Churyumov-Gerasimenko Observed by Rosetta-Alice

    NASA Astrophysics Data System (ADS)

    Steffl, Andrew J.; Feldman, Paul D.; A'Hearn, Michael F.; Bertaux, Jean-Loup; Feaga, Lori M.; Keeney, Brian A.; Knight, Matthew M.; Noonan, John; Parker, Joel Wm.; Schindhelm, Eric R.; Stern, S. Alan; Vervack, Ronald J.; Weaver, Harold A.

    2015-11-01

    The comet 67P/Churyumov-Gerasimenko, passed through perihelion on 13 August 2015. In the weeks surrounding the perihelion passage, several dramatic outbursts of dust have been observed by instruments aboard ESA’s Rosetta spacecraft. These outbursts are typically intense and short-lived, with timescales on the order of several tens of minutes to a few hours. We report on the two largest of these dusty outbursts observed by the Alice far-ultraviolet (700-2050Å) spectrograph, which occurred on 10 July 2015 and 22 August 2015. On 10 July 2015 02:06 UTC, Alice spectra of the sunward limb, nucleus and anti-sunward limb show typical levels of dust-scattered sunlight, with the sunward limb 3-4x brighter than the anti-sunward limb. Beginning around 02:10 UTC, the dust on the anti-sunward side of the nucleus brightened rapidly, increasing by a factor of 21 over pre-outburst levels, when integrated over a 10-minute exposure. A 40s exposure beginning at 02:20 showed an additional factor of two increase in brightness. During the outburst, the dust became significantly brighter than the sunlit nucleus. Concurrent NAVCAM images show a large dust cloud expanding out from the night side of the nucleus. Despite this forty-fold increase in dust brightness, the Alice data show no evidence of enhancements of H2O, CO, CO2, O2, O, or H in the post-outburst spectra. By 04:24 UTC, after a 2-hour data gap, the comet had returned to pre-event levels. Although complicated by the scanning motion of the spacecraft, the start of Alice observations on 22 August 2015 revealed a major dust outburst in progress, this time confined to the sunward side of the nucleus. Between 07:03 and 07:54, the brightness of dust on the sunward side faded by a factor of 7. NAVCAM images from this period also show a dramatic fan-shaped cloud of dust. Unlike the 10 July event, the 22 August event shows some evidence of increased gas emissions.

  17. Archival Legacy Investigations of Circumstellar Environments (ALICE): Statistical assessment of point source detections

    NASA Astrophysics Data System (ADS)

    Choquet, Élodie; Pueyo, Laurent; Soummer, Rémi; Perrin, Marshall D.; Hagan, J. Brendan; Gofas-Salas, Elena; Rajan, Abhijith; Aguilar, Jonathan

    2015-09-01

    The ALICE program, for Archival Legacy Investigation of Circumstellar Environment, is currently conducting a virtual survey of about 400 stars, by re-analyzing the HST-NICMOS coronagraphic archive with advanced post-processing techniques. We present here the strategy that we adopted to identify detections and potential candidates for follow-up observations, and we give a preliminary overview of our detections. We present a statistical analysis conducted to evaluate the confidence level on these detection and the completeness of our candidate search.

  18. Front end optimization for the monolithic active pixel sensor of the ALICE Inner Tracking System upgrade

    NASA Astrophysics Data System (ADS)

    Kim, D.; Aglieri Rinella, G.; Cavicchioli, C.; Chanlek, N.; Collu, A.; Degerli, Y.; Dorokhov, A.; Flouzat, C.; Gajanana, D.; Gao, C.; Guilloux, F.; Hillemanns, H.; Hristozkov, S.; Junique, A.; Keil, M.; Kofarago, M.; Kugathasan, T.; Kwon, Y.; Lattuca, A.; Mager, M.; Sielewicz, K. M.; Marin Tobon, C. A.; Marras, D.; Martinengo, P.; Mazza, G.; Mugnier, H.; Musa, L.; Pham, T. H.; Puggioni, C.; Reidt, F.; Riedler, P.; Rousset, J.; Siddhanta, S.; Snoeys, W.; Song, M.; Usai, G.; Van Hoorne, J. W.; Yang, P.

    2016-02-01

    ALICE plans to replace its Inner Tracking System during the second long shut down of the LHC in 2019 with a new 10 m2 tracker constructed entirely with monolithic active pixel sensors. The TowerJazz 180 nm CMOS imaging Sensor process has been selected to produce the sensor as it offers a deep pwell allowing full CMOS in-pixel circuitry and different starting materials. First full-scale prototypes have been fabricated and tested. Radiation tolerance has also been verified. In this paper the development of the charge sensitive front end and in particular its optimization for uniformity of charge threshold and time response will be presented.

  19. Characterization of a New Charge Sensitive Preamplifier (CSP) for the Electromagnetic Calorimeters of the ALICE Experiment

    SciTech Connect

    Wang, Yaping; Cai, Xu; Yin, Zhongbao

    2012-01-01

    The ALICE calorimeters PHOS and EMCal (including its extension DCal) are based on Avalanche Photo-Diode (APD) photosensors with Charge Sensitive Preamplifiers (CSPs) for readout of the scintillating elements. A new CSP has been developed on the basis of the design of the PHOS CSP, but modified to meet the requirements of the EMCal and DCal. Modifications were made specifically for a different APD choice with different characteristics, and also with the goals of less noise, faster rise time, and reduced cost. This paper presents a detailed description of the new CSP features and the test results.

  20. Seismic images of the Brooks Range fold and thrust belt, Arctic Alaska, from an integrated seismic reflection/refraction experiment

    USGS Publications Warehouse

    Levander, A.; Fuis, G.S.; Wissinger, E.S.; Lutter, W.J.; Oldow, J.S.; Moore, T.E.

    1994-01-01

    We describe results of an integrated seismic reflection/refraction experiment across the Brooks Range and flanking geologic provinces in Arctic Alaska. The seismic acquisition was unusual in that reflection and refraction data were collected simultaneously with a 700 channel seismograph system deployed numerous times along a 315 km profile. Shot records show continuous Moho reflections from 0-180 km offset, as well as numerous upper- and mid-crustal wide-angle events. Single and low-fold near-vertical incidence common midpoint (CMP) reflection images show complex upper- and middle-crustal structure across the range from the unmetamorphosed Endicott Mountains allochthon (EMA) in the north, to the metamorphic belts in the south. Lower-crustal and Moho reflections are visible across the entire reflection profile. Travel-time inversion of PmP arrivals shows that the Moho, at 33 km depth beneath the North Slope foothills, deepens abruptly beneath the EMA to a maximum of 46 km, and then shallows southward to 35 km at the southern edge of the range. Two zones of upper- and middle-crustal reflections underlie the northern Brooks Range above ~ 12-15 km depth. The upper zone, interpreted as the base of the EMA, lies at a maximum depth of 6 km and extends over 50 km from the range front to the north central Brooks Range where the base of the EMA outcrops above the metasedimentary rocks exposed in the Doonerak window. We interpret the base of the lower zone, at ~ 12 km depth, to be from carbonate rocks above the master detachment upon which the Brooks Range formed. The seismic data suggest that the master detachment is connected to the faults in the EMA by several ramps. In the highly metamorphosed terranes south of the Doonerak window, the CMP section shows numerous south-dipping events which we interpret as a crustal scale duplex involving the Doonerak window rocks. The basal detachment reflections can be traced approximately 100 km, and dip southward from about 10-12 km

  1. The effects of varied densities on the growth and emigration of adult cutthroat trout and brook trout in fenced stream enclosures

    USGS Publications Warehouse

    Buys, D.J.; Hilderbrand, R.H.; Kershner, J.L.

    2009-01-01

    We evaluated the effects of various density treatments on adult fish growth and emigration rates between Bonneville cutthroat trout Oncorhynchus clarki utah and brook trout Salvelinus fontinalis in stream enclosures in Beaver Creek, Idaho, We used 3 density treatments (low, ambient, and high fish densities) to evaluate density-related effects and to ensure a response. Intraspecific ambient-density tests using cutthroat trout only were also performed. Results indicated an absence of cage effects in the stream enclosures and no differences in fish growth between ambient-density stream-enclosure fish and free-range fish. Brook trout outgrew and moved less than cutthroat trout in the stream enclosures, especially as density increased, In all 3 density treatments, brook trout gained more weight than cutthroat trout, with brook trout gaining weight in each density treatment and cutthroat trout losing weight at the highest density. At high densities, cutthroat trout attempted to emigrate more frequently than brook trout in sympatry and allopatry. We observed a negative correlation between growth and emigration for interspecific cutthroat trout, indicating a possible competitive response due to the presence of brook trout. We observed similar responses for weight and emigration in trials of allopatric cutthroat trout, indicating strong intraspecific effects as density increased. While cutthroat trout showed a response to experimental manipulation with brook trout at different densities, there has been long-term coexistence between these species in Beaver Creek, This system presents a unique opportunity to study the mechanisms that lead cutthroat trout to coexist with rather than be replaced by nonnative brook trout.

  2. Urbanization and recharge in the vicinity of East Meadow Brook, Nassau County, New York, part 4. Water quality in the headwaters area, 1988-93. Water resources investigations

    SciTech Connect

    Brown, C.J.; Scorca, M.P.; Stockar, G.G.; Stumm, F.; Ku, H.F.H.

    1997-12-31

    This report (1) discusses the concentration of constituents in precipitation and stormwater in the headwaters area of East Meadow Brook, and (2) describes the extent, and depth to which ground water beneath the stream is affected by stormwater. It also relates the concentrations and loads of selected constituents, including sodium and chloride, to storm discharge and season. This is the final report from the four-part study that examined stormwater and ground water at East Meadow Brook during 1988-93.

  3. The ALICE high-level trigger read-out upgrade for LHC Run 2

    NASA Astrophysics Data System (ADS)

    Engel, H.; Alt, T.; Breitner, T.; Gomez Ramirez, A.; Kollegger, T.; Krzewicki, M.; Lehrbach, J.; Rohr, D.; Kebschull, U.

    2016-01-01

    The ALICE experiment uses an optical read-out protocol called Detector Data Link (DDL) to connect the detectors with the computing clusters of Data Acquisition (DAQ) and High-Level Trigger (HLT). The interfaces of the clusters to these optical links are realized with FPGA-based PCI-Express boards. The High-Level Trigger is a computing cluster dedicated to the online reconstruction and compression of experimental data. It uses a combination of CPU, GPU and FPGA processing. For Run 2, the HLT has replaced all of its previous interface boards with the Common Read-Out Receiver Card (C-RORC) to enable read-out of detectors at high link rates and to extend the pre-processing capabilities of the cluster. The new hardware also comes with an increased link density that reduces the number of boards required. A modular firmware approach allows different processing and transport tasks to be built from the same source tree. A hardware pre-processing core includes cluster finding already in the C-RORC firmware. State of the art interfaces and memory allocation schemes enable a transparent integration of the C-RORC into the existing HLT software infrastructure. Common cluster management and monitoring frameworks are used to also handle C-RORC metrics. The C-RORC is in use in the clusters of ALICE DAQ and HLT since the start of LHC Run 2.

  4. Heavy-ion physics with the ALICE experiment at the CERN Large Hadron Collider.

    PubMed

    Schukraft, J

    2012-02-28

    After close to 20 years of preparation, the dedicated heavy-ion experiment A Large Ion Collider Experiment (ALICE) took first data at the CERN Large Hadron Collider (LHC) accelerator with proton collisions at the end of 2009 and with lead nuclei at the end of 2010. After a short introduction into the physics of ultra-relativistic heavy-ion collisions, this article recalls the main design choices made for the detector and summarizes the initial operation and performance of ALICE. Physics results from this first year of operation concentrate on characterizing the global properties of typical, average collisions, both in proton-proton (pp) and nucleus-nucleus reactions, in the new energy regime of the LHC. The pp results differ, to a varying degree, from most quantum chromodynamics-inspired phenomenological models and provide the input needed to fine tune their parameters. First results from Pb-Pb are broadly consistent with expectations based on lower energy data, indicating that high-density matter created at the LHC, while much hotter and larger, still behaves like a very strongly interacting, almost perfect liquid.

  5. [Alice in Wonderland syndrome due to Epstein-Barr virus infection].

    PubMed

    Pérez Méndez, C; Martín Mardomingo, M; Otero Martínez, B; Lagunilla Herrero, L; Fernández Zurita, C

    2001-06-01

    The Alice in Wonderland syndrome refers to distortions in body image and in the apparent sizes, shapes, and spatial relations of objects seen. The syndrome is usually associated with migraine headaches and has also been reported in several viral infections. We report a 6-year-old boy who presented to the emergency department complaining of several episodes in which the ceiling, the objects and the people around him seemed very small and far away. The child presented no alteration in the level of consciousness. The episodes provoked great fear in the child. Physical examination revealed no abnormalities except pharyngoamygdalitis. Serologic studies (IgM antibodies to viral capsid antigen) confirmed Epstein-Barr virus infection. The child's symptoms resolved spontaneously within 48 hours and he continued to be asymptomatic after a 4 -month follow-up. We consider that all children presenting a clinical picture consistent with the Alice in Wonderland syndrome should undergo serological testing for Epstein Barr virus infection. Diagnosis would enable physicians to reassure the family of the temporary and benign nature of this alarming condition. PMID:11412412

  6. Results from the first p+p runs of the ALICE High Level Trigger at LHC

    NASA Astrophysics Data System (ADS)

    Kanaki, Kalliopi; ALICE HLT Collaboration

    2011-12-01

    The High Level Trigger for the ALICE experiment at LHC is a powerful, sophisticated tool aimed at compressing the raw data volume and issuing selective triggers for events with desirable physics content. At its current state it integrates information from all major ALICE detectors, i. e. the inner tracking system, the time projection chamber, the electromagnetic calorimeters, the transition radiation detector and the muon spectrometer performing real-time event reconstruction. The steam engine behind HLT is a high performance computing cluster of several hundred nodes. It has to reduce the data rate from 25 GB/s to 1.25 GB/s for fitting the DAQ mass storage bandwidth. The cluster is served by a full GigaBit Ethernet network, in addition to an InfiniBand backbone network. To cope with the great challenge of Pb+Pb collisions in autumn 2010, its performance capabilities are being enhanced with the addition of new nodes. Towards the same end the first GPU co-processors are in place. During the first period of data taking with p+p collisions the HLT was extensively used to reconstruct, analyze and display data from the various participating detectors. Among other tasks it contributed to the monitoring of the detector performance, selected events for their calibration and efficiency studies, and estimated primary and secondary vertices from p+p collisions identifying V0 topologies. The experience gained during these first months of online operation will be presented.

  7. The ALICE Inner Tracking System: Design, physics performance and R&D issues

    SciTech Connect

    Giubellino, P.

    1995-07-15

    ALICE is a dedicated Heavy-Ion experiment proposed for the future LHC collider at CERN. The main goals of the ALICE Inner Tracking System are the reconstruction of secondary vertexes and the tracking and identification of low-p{sub t} electrons; at the same time, it will provide a significant improvement of the momentum resolution at large p{sub t} and the tracking and identification of low-p{sub t} hadrons. The ITS will consist of five cilindrical layers of radii from 7.5 to 50 cm. of high-resolution detectors. The unprecedented particle density foreseen, of up to 8000 particles per unit {eta}, imposes the use of sophisticated, and often innovative, technologies for the detectors, the electronics and the support and cooling system. Therefore, extensive R&D programs are now being pursued on various aspects of the project. Here are presented the basic ideas for the design, a few examples of the expected performance, and a brief overview of the ongoing R&D.

  8. O2: A novel combined online and offline computing system for the ALICE Experiment after 2018

    NASA Astrophysics Data System (ADS)

    Ananya; Alarcon Do Passo Suaide, A.; Alves Garcia Prado, C.; Alt, T.; Aphecetche, L.; Agrawal, N.; Avasthi, A.; Bach, M.; Bala, R.; Barnafoldi, G.; Bhasin, A.; Belikov, J.; Bellini, F.; Betev, L.; Breitner, T.; Buncic, P.; Carena, F.; Carena, W.; Chapeland, S.; Chibante Barroso, V.; Cliff, F.; Costa, F.; Cunqueiro Mendez, L.; Dash, S.; Delort, C.; Denes, E.; Divia, R.; Doenigus, B.; Engel, H.; Eschweiler, D.; Fuchs, U.; Gheata, A.; Gheata, M.; Gomez Ramirez, A.; Gorbunov, S.; Graczykowski, L.; Grigoras, A.; Grigoras, C.; Grigore, A.; Grosso, R.; Guernane, R.; Gupta, A.; Hrivnacova, I.; Hristov, P.; Ionita, C.; Ivanov, M.; Janik, M.; Kalcher, S.; Kassalias, N.; Kebschull, U.; Khandelwal, R.; Kushpil, S.; Kisel, I.; Kiss, T.; Kollegger, T.; Kowalski, M.; Kretz, M.; Kulakov, I.; Lafage, V.; Lara, C.; Legrand, I.; Lindenstruth, V.; Maevskaya, A.; Malzacher, P.; Morsch, A.; Nandi, B.; Niculescu, M.; Pillot, P.; Planinic, M.; Pluta, J.; Poljak, N.; Rajput, S.; Read, K.; Ribon, A.; Rohr, D.; Rubin, G.; Shahoyan, R.; Sharma, A.; Simonetti, G.; Smorholm, O.; Soós, C.; Szymanski, M.; Telesca, A.; Thaeder, J.; Udupa, A.; Vande Vyvre, P.; Vennedey, F.; von Haller, B.; Wenzel, S.; Zampolli, C.; Zyzak, M.; Alice Collaboration

    2014-06-01

    ALICE (A Large Ion Collider Experiment) is a detector dedicated to the studies with heavy ion collisions exploring the physics of strongly interacting nuclear matter and the quark-gluon plasma at the CERN LHC (Large Hadron Collider). After the second long shutdown of the LHC, the ALICE Experiment will be upgraded to make high precision measurements of rare probes at low pT, which cannot be selected with a trigger, and therefore require a very large sample of events recorded on tape. The online computing system will be completely redesigned to address the major challenge of sampling the full 50 kHz Pb-Pb interaction rate increasing the present limit by a factor of 100. This upgrade will also include the continuous un-triggered read-out of two detectors: ITS (Inner Tracking System) and TPC (Time Projection Chamber)) producing a sustained throughput of 1 TB/s. This unprecedented data rate will be reduced by adopting an entirely new strategy where calibration and reconstruction are performed online, and only the reconstruction results are stored while the raw data are discarded. This system, already demonstrated in production on the TPC data since 2011, will be optimized for the online usage of reconstruction algorithms. This implies much tighter coupling between online and offline computing systems. An R&D program has been set up to meet this huge challenge. The object of this paper is to present this program and its first results.

  9. Common Readout Unit (CRU) - A new readout architecture for the ALICE experiment

    NASA Astrophysics Data System (ADS)

    Mitra, J.; Khan, S. A.; Mukherjee, S.; Paul, R.

    2016-03-01

    The ALICE experiment at the CERN Large Hadron Collider (LHC) is presently going for a major upgrade in order to fully exploit the scientific potential of the upcoming high luminosity run, scheduled to start in the year 2021. The high interaction rate and the large event size will result in an experimental data flow of about 1 TB/s from the detectors, which need to be processed before sending to the online computing system and data storage. This processing is done in a dedicated Common Readout Unit (CRU), proposed for data aggregation, trigger and timing distribution and control moderation. It act as common interface between sub-detector electronic systems, computing system and trigger processors. The interface links include GBT, TTC-PON and PCIe. GBT (Gigabit transceiver) is used for detector data payload transmission and fixed latency path for trigger distribution between CRU and detector readout electronics. TTC-PON (Timing, Trigger and Control via Passive Optical Network) is employed for time multiplex trigger distribution between CRU and Central Trigger Processor (CTP). PCIe (Peripheral Component Interconnect Express) is the high-speed serial computer expansion bus standard for bulk data transport between CRU boards and processors. In this article, we give an overview of CRU architecture in ALICE, discuss the different interfaces, along with the firmware design and implementation of CRU on the LHCb PCIe40 board.

  10. Prospects for heavy-flavour measurements with the ALICE inner and forward tracker upgrade

    NASA Astrophysics Data System (ADS)

    Fionda, F.

    2016-01-01

    During the second long shutdown (LS2) of the LHC the ALICE detector will be improved with the installation of an upgraded Inner Tracking System (ITS) and a new Muon Forward Tracker (MFT). These detectors will crucially contribute to the precise characterization of the high-temperature, strongly-interacting medium created in ultra-relativistic Pb-Pb collisions at √sNN = 5.5 TeV. In the central barrel, the upgraded ITS will consist of seven cylindrical layers of silicon pixel detectors, starting at a radial distance of 22.4 mm from the beam axis. At forward rapidity, the MFT will be composed of five silicon pixel planes added in the acceptance of the existing Muon Spectrometer (-4 < ƞ < -2.5), upstream to the hadron absorber. Detailed results on the expected performances for heavy-flavour (HF) measurements down to low transverse momentum, with the upgraded ITS and MFT, will be given for central Pb-Pb collisions for various benchmark analyses, assuming an integrated luminosity of 10 nb-1, as foreseen for the ALICE upgrade programme.

  11. Icy outbursts from comet 67P/Churyumov-Gerasimenko as observed by the Alice FUV spectrograph

    NASA Astrophysics Data System (ADS)

    Steffl, Andrew Joseph; A'Hearn, Michael F.; Bertaux, Jean-Loup; Feaga, Lori M.; Feldman, Paul D.; Noonan, John; Parker, Joel Wm.; Schindhelm, Eric; Stern, S. Alan; Weaver, Harold A.

    2016-10-01

    Since the Rosetta spacecraft's historic rendezvous with 67P/Churyumov-Gerasimenko on 6 August 2014, the Alice far-ultraviolet spectrograph (700-2050Å) has monitored gas and dust emissions from the comet. During this time, Alice has observed several large dust outbursts. During such outbursts, the brightness of sunlight reflected from dust can increase by almost two orders of magnitude on timescales of a few tens of minutes. Typically, the reflectance spectrum of dust is very similar to that of the pre-perihelion nucleus: dark and relatively featureless with a blue spectral slope. However, a subset of the dust outbursts show a markedly different character with dust that is bright--in some cases brighter than the sunlit nucleus itself-- and displaying a strong absorption feature around 1700Å, characteristic of water ice. In such outbursts, the observed "dust" is likely to consist primarily of icy grains. We focus on two of these icy outbursts that occurred on 10 July 2015 and 13 September 2015 showing spectra from before, during, and after the events and comparing them to spectra of the nucleus obtained contemporaneously and from several months before and after perihelion.

  12. ALICE: The Ultraviolet Imaging Spectrograph Aboard the New Horizons Pluto-Kuiper Belt Mission

    NASA Astrophysics Data System (ADS)

    Stern, S. Alan; Slater, David C.; Scherrer, John; Stone, John; Dirks, Greg; Versteeg, Maarten; Davis, Michael; Gladstone, G. Randall; Parker, Joel W.; Young, Leslie A.; Siegmund, Oswald H. W.

    2008-10-01

    The ALICE instrument is a lightweight (4.4 kg), low-power (4.4 watt) imaging spectrograph aboard the New Horizons mission to the Pluto system and the Kuiper Belt. Its primary job is to determine the relative abundances of various species in Pluto’s atmosphere. ALICE will also be used to search for an atmosphere around Pluto’s moon, Charon, as well as the Kuiper Belt Objects (KBOs) that New Horizons is expected to fly by after Pluto-Charon, and it will make UV surface reflectivity measurements of all of these bodies, as well as of Pluto’s smaller moons Nix and Hydra. The instrument incorporates an off-axis telescope feeding a Rowland-circle spectrograph with a 520-1870 Å spectral passband, a spectral point spread function of 3-6 Å FWHM, and an instantaneous spatial field-of-view that is 6 degrees long. Two different input apertures that feed the telescope allow for both airglow and solar occultation observations during the mission. The focal plane detector is an imaging microchannel plate (MCP) double delay-line detector with dual solar-blind opaque photocathodes (KBr and CsI) and a focal surface that matches the instrument’s 15-cm diameter Rowland-circle. In this paper, we describe the instrument in greater detail, including descriptions of its ground calibration and initial in flight performance. New Horizons launched on 19 January 2006.

  13. New U/Pb ages from granite and granite gneiss in the Ruby geanticline and southern Brooks Range, Alaska ( USA).

    USGS Publications Warehouse

    Patton, W.W.; Stern, T.W.; Arth, Joseph G.; Carlson, C.

    1987-01-01

    New U/Pb zircon ages from the Ray Mountains of central Alaska clarify the plutonic history of the Ruby geanticline and support earlier suggestions that the Ruby geanticline and S Brooks Range were once parts of the same tectonostratigraphic terrane. U/Pb zircon ages of 109 to 112 Ma from the Ray Mountains pluton confirm previously reported mid-Cretaceous K/Ar ages and rule out the possibility that the earliest intrusive phase of the pluton is older than mid-Cretaceous K/Ar ages and rule out the possibility that the earliest intrusive phase of the pluton is older than mid- Cretaceous. New U/Pb zircon ages from 4 granite gneiss samples in the Ray Mountains indicate a Devonian protolith age of 390+ or -12 Ma and suggest that the Ruby geanticline, like the S Brooks Range, underwent a major plutonic event in mid-Paleozoic time.-Authors

  14. Growth, age at metamorphosis, and sex ratio of northern brook lamprey in a tributary of southern Lake Superior

    USGS Publications Warehouse

    Purvis, Harold A.

    1970-01-01

    Growth was studied of five year classes of the northern brook lamprey, Ichthyomyzon fossor, collected from the Sturgeon River during intervals between treatment of the stream with a lampricide. Growth varied considerably among year classes. Larvae of the 1963 year class were slightly longer at age II and 30% longer at age III than the III-group larvae of the 1960 year class. About 6% of 558 III-group lampreys of the 1963 year class had metamorphosed by 17 August 1966. Although the sex ratio of larvae was about 1:1, 97% of the metamorphosed lampreys were males. The distribution of pigmentation on the caudal fin and upper lip in ammocoetes less than 40 mm long permitted accurate and rapid separation of northern brook lampreys from the sea lamprey, Petromyzon marinus.

  15. Annual layers in river-bed sediment of a stagnant river-mouth area of the Kitagawa Brook, Central Japan

    NASA Astrophysics Data System (ADS)

    Kurashige, Y.; Nakano, T.; Kasubuchi, E.; Maruo, M.; Domitsu, H.

    2015-03-01

    The river mouth of Kitagawa Brook is normally stagnant because it is easily closed by sand and gravel transported by littoral currents of Biwa Lake, Japan. A new urban area exists in the basin and sewerage works were constructed in the early 1990s, so contaminated water with a bad odour had flowed into the brook before the sewerage works. To reduce the smell, the river mouth was excavated to narrow the channel in the early 1980s. Thus, river-bed sediment after this excavation only occurs at the river mouth. From the upper 24 cm of a sediment core, we found 19 strata of leaves which were supplied from deciduous trees in autumn. We also found several gravel layers which were supplied from the lake during severe storms. The combination of veins and gravel layers were reconstructed for about 20 years of sediment records with an error of two to three years.

  16. Survey of brook trout (Salvelinus fontinalis) population in the Upper Little Tennessee River watershed, Macon and Swain Counties, North Carolina

    SciTech Connect

    Not Available

    1993-08-01

    During the months May--November 1992, as part of the Western North Carolina Alliance upper Little Tennessee River watershed survey, streams in the North Carolina portion (Macon and Swain Counties) of the watershed were surveyed for the presence of brook trout (Salvelinus fontinalis). The purposes of this survey were threefold: (1) To use this sensitive, pollution-intolerant species as an indicator organism for high quality waters. (2) To assist the North Carolina Wildlife Resources Commission, the US Forest Service, and private landowners in managing for and protecting this popular game fish. (3) To locate possible stocks of pure ``southern Appalachian strain`` brook trout. Research is currently underway at the University of Tennessee and Auburn University to determine whether there is in fact a distinct southem subspecies or race of S. fontinalis. This author is one of those who is inclined to believe there is.

  17. The mitogenomes of the pouched lamprey (Geotria australis) and least brook lamprey (Lampetra aepyptera) with phylogenetic considerations.

    PubMed

    Ren, Jianfeng; Pu, Jiafei; Buchinger, Tyler; Zhu, Xinyun; Baker, Cindy; Li, Weiming

    2016-09-01

    We report the mitogenomes of the pouched lamprey (Geotria australis) and least brook lamprey (Lampetra aepyptera) in the families Geotriidae and Petromyzontidae, respectively. Both of the mitogenomes contain the 37 typical vertebrate genes. Their gene order and contents are identical to those of previously described lamprey mitogenomes. The mitogenome of G. australis (17 080 bp) is the largest among the 10 reported lamprey mitogenomes, owed to two long noncoding regions. The mitogenome of L. aepyptera is 77 bp longer (16 236 bp) than that of the congeneric European river lamprey L. fluviatilis, a size difference mostly due to different copy numbers of tandem repeats in the noncoding regions. The phylogenetic analysis supports that the pouched lamprey (Geotriidae) diverged earlier from the common ancestor of lampreys than the Petromyzonids, and the placement of the least brook lamprey in the genus Lampetra.

  18. Foraminiferal zonation and carbonate facies of Carboniferous (Mississippian and Pennsylvanian) Lisburne group, central and eastern Brooks range, Arctic Alaska

    USGS Publications Warehouse

    Armstrong, Augustus K.; Mamet, Bernard L.; Dutro, J. Thomas

    1970-01-01

    The Lisburne Group carbonate rocks of the central and eastern Brooks Range contain foraminiferal assemblages assigned to zones of late Tournaisian (Osage) to early Moscovian (Atoka) age. Representatives of both Eurasiatic and American cratonic microfaunas permit correlation with the original Carboniferous type sections in western Europe as well as with the standard Mississippian and Pennsylvanian sequences in the Mid-Continent region of North America. Correlation anomalies in the lower part of the sequence are discussed.

  19. Spatial heterogeneity of mobilization processes and input pathways of herbicides into a brook in a small agricultural catchment

    NASA Astrophysics Data System (ADS)

    Doppler, Tobias; Lück, Alfred; Popow, Gabriel; Strahm, Ivo; Winiger, Luca; Gaj, Marcel; Singer, Heinz; Stamm, Christian

    2010-05-01

    Soil applied herbicides can be transported from their point of application (agricultural field) to surface waters during rain events. There they can have harmful effects on aquatic species. Since the spatial distribution of mobilization and transport processes is very heterogeneous, the contributions of different fields to the total load in a surface water body may differ considerably. The localization of especially critical areas (contributing areas) can help to efficiently minimize herbicide inputs to surface waters. An agricultural field becomes a contributing area when three conditions are met: 1) herbicides are applied, 2) herbicides are mobilized on the field and 3) the mobilized herbicides are transported rapidly to the surface water. In spring 2009, a controlled herbicide application was performed on corn fields in a small (ca 1 km2) catchment with intensive crop production in the Swiss plateau. Subsequently water samples were taken at different locations in the catchment with a high temporal resolution during rain events. We observed both saturation excess and hortonian overland flow during the field campaign. Both can be important mobilization processes depending on the intensity and quantity of the rain. This can lead to different contributing areas during different types of rain events. We will show data on the spatial distribution of herbicide loads during different types of rain events. Also the connectivity of the fields with the brook is spatially heterogeneous. Most of the fields are disconnected from the brook by internal sinks in the catchment, which prevents surface runoff from entering the brook directly. Surface runoff from these disconnected areas can only enter the brook rapidly via macropore-flow into tile drains beneath the internal sinks or via direct shortcuts to the drainage system (maintenance manholes, farmyard or road drains). We will show spatially distributed data on herbicide concentration in purely subsurface systems which shows

  20. Crustal implications of bedrock geology along the Trans-Alaska Crustal Transect (TACT) in the Brooks Range, northern Alaska

    USGS Publications Warehouse

    Moore, T.E.; Wallace, W.K.; Mull, C.G.; Adams, K.E.; Plafker, G.; Nokleberg, W.J.

    1997-01-01

    Geologic mapping of the Trans-Alaska Crustal Transect (TACT) project along the Dalton Highway in northern Alaska indicates that the Endicott Mountains allochthon and the Hammond terrane compose a combined allochthon that was thrust northward at least 90 km in the Early Cretaceous. The basal thrust of the combined allochthon climbs up section in the hanging wall from a ductile shear zone, in the south through lower Paleozoic rocks of the Hammond terrane and into Upper Devonian rocks of the Endicott Mountains allochthon at the Mount Doonerak antiform, culminating in Early Cretaceous shale in the northern foothills of the Brooks Range. Footwall rocks north of the Mount Doonerak antiform are everywhere parautochthonous Permian and Triassic shale of the North Slope terrane rather than Jurassic and Lower Cretaceous strata of the Colville Basin as shown in most other tectonic models of the central Brooks Range. Stratigraphic and structural relations suggest that this thrust was the basal detachment for Early Cretaceous deformation. Younger structures, such as the Tertiary Mount Doonerak antiform, deform the Early Cretaceous structures and are cored by thrusts that root at a depth of about 10 to 30 km along a deeper detachment than the Early Cretaceous detachment. The Brooks Range, therefore, exposes (1) an Early Cretaceous thin-skinned deformational belt developed during arc-continent collision and (2) a mainly Tertiary thick-skinned orogen that is probably the northward continuation of the Rocky Mountains erogenic belt. A down-to-the-south zone of both ductile and brittle normal faulting along the southern margin of the Brooks Range probably formed in the mid-Cretaceous by extensional exhumation of the Early Cretaceous contractional deformation. copyright. Published in 1997 by the American Geophysical Union.

  1. Isolation and characterization of eight microsatellite loci in the brook lamprey Lampetra planeri (Petromyzontiformes) using 454 sequence data.

    PubMed

    Schedina, I M; Pfautsch, S; Hartmann, S; Dolgener, N; Polgar, A; Bianco, P G; Tiedemann, R; Ketmaier, V

    2014-09-01

    Eight polymorphic microsatellite loci were developed for the brook lamprey Lampetra planeri through 454 sequencing and their usefulness was tested in 45 individuals of both L. planeri and the river lamprey Lampetra fluviatilis. The number of alleles per loci ranged between two and five; the Italian and Irish populations had a mean expected heterozygosity of 0·388 and 0·424 and a mean observed heterozygosity of 0·418 and 0·411, respectively.

  2. Toxicity of 2,3,7,8-tetrachlorodibenzo-p-dioxin to brook trout (salvelinus fontinalis) during early development

    SciTech Connect

    Walker, M.K.; Peterson, R.E. )

    1994-05-01

    The sensitivity of early life stages of brook trout (Salvelinus fontinalis) to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) toxicity was investigated. Newly fertilized eggs were exposed for 48 h to water containing either acetone or a range of concentrations of [[sup 3]H]TCDD dissolved in acetone. Eggs were then transferred to TCDD-free water and observed through development. TCDD concentrations of 101 to 470 pg/g in the eggs caused dose-related increases in sac-fry mortality associated with yolk-sac edema, hemorrhages, and arrested development. These signs of TCDD-induced toxicity resemble blue-sac disease. The NOELs and LOELs for sac-fry mortality were 135 and 185 pg TCDD/g egg, respectively, whereas the LD50 and LD100 were 200 and 324 pg/g egg, respectively. The time course and signs of TCDD toxicity to brook trout during early development are essentially identical to those observed in both rainbow trout and lake trout following TCDD exposure of their eggs via water or injection, and in lake trout exposed to maternally derived TCDD. Brook trout sac fry are intermediate in sensitivity to TCDD-induced lethality compared to lake trout and rainbow trout.

  3. Effect of stream acidification and inorganic aluminum on mortality of brook trout (Salvelinus fontinalis) in the Catskill Mountains, New York

    USGS Publications Warehouse

    Baldigo, Barry P.; Murdoch, Peter S.

    1997-01-01

    Juvenile brook trout (Salvelinus fontinalis) were exposed in cages to fluctuating chemical conditions in four Catskill Mountain streams during the spring and fall of 1989 and the spring of 1990. Specific chemical constituents and characteristics of acidic episodes that correlated with increased fish mortality were identified. Mortality increased during acidic episodes in one poorly buffered stream when inorganic monomeric aluminum (Al(im)) concentrations increased; mortality was low in three other streams during acidic episodes of shorter duration and smaller magnitude than measured in the poorly buffered stream. Variation in mortality was attributed primarily to differences in concentrations of both Al(im) and dissolved organic carbon. Linear and logistic regression analyses indicate that either mean or median Al(im) concentrations could account for 73-99% of the variability in mortality. Regression analyses suggest that mortality was highly related (in order of importance) to Al(im), pH, dissolved organic carbon, calcium, and chloride concentration. Brook trout mortality was also highly related to durations of exposure above 0.225 and 0.250 mg/L Al(im) during test periods. Characteristics of acidic-Al(im) episodes that are critical to mortality of caged brook trout appear to be (i) Al(im) concentrations of at least 0.225 ?? 0.025 mg/L and (ii) exposure to these toxic Al(im) concentrations for at least 2 days.

  4. Appraisal of the water resources of the Big Sioux aquifer, Brookings, Deuel, and Hamlin Counties, South Dakota

    USGS Publications Warehouse

    Koch, Neil C.

    1980-01-01

    A finite-difference method digital model was used to simulate steady-state conditions of the Big Sioux aquifer in Brookings, Deuel, and Hamlin Counties, S. Dak. Average annual water levels in the Big Sioux aquifer and average base flow discharge 58 cubic feet per second on the Big Sioux River near Brookings were based on the period 1970 through 1976. The computer model was used to model transient conditions by simulating monthly periods from April through August 1976. Evapotranspiration and pumpage changes were made for each month. A computer simulation was made without irrigation pumpage which resulted in an increase in the base flow from 0.66 to 9 cubic feet per second for August 1976 in the Big Sioux River near Brookings. Two transient simulations , one with the drought conditions of 1976 and one using all the pumpage allowed by irrigation permits approved by the State as of February 1979 showed, as a result of pumpage, that there was a decrease in evapotranspiration and a decrease in discharge to streams which amounts to 26 and 31% of the total groundwater pumped. Groundwater and surface water in the study area are primarily calcium bicarbonate types and are chemically suitable for irrigation with respect to sodium hazard. Sepcific conductance of groundwater ranged from 407 to 1,790 micromhos per centimeter at 25 Celsius. (USGS)

  5. Ice processes affect habitat use and movements of adult cutthroat trout and brook trout in a Wyoming foothills stream

    USGS Publications Warehouse

    Lindstrom, J.W.; Hubert, W.A.

    2004-01-01

    Habitat use and movements of 25 adult cutthroat trout Oncorhynchus clarkii and 25 adult brook trout Salvelinus fontinalis from fall through winter 2002-2003 were assessed by means of radiotelemetry in a 7-km reach of a Rocky Mountains foothills stream. Temporal dynamics of winter habitat conditions were evaluated by regularly measuring the features of 30 pools and 5 beaver Castor canadensis ponds in the study reach. Groundwater inputs at three locations raised mean daily water temperatures in the stream channel during winter to 0.2-0.6??C and kept at least 250 m of the downstream channel free of ice, but the lack of surface ice further downstream led to the occurrence of frazil ice and anchor ice in pools and unstable habitat conditions for trout. Pools in segments that were not affected by groundwater inputs and beaver ponds tended to be stable and snow accumulated on the surface ice. Pools throughout the study reach tended to become more stable as snow accumulated. Both cutthroat trout and brook trout selected beaver ponds as winter progressed but tended to use lateral scour pools in proportion to their availability. Tagged fish not in beaver ponds selected lateral scour pools that were deeper than average and stable during winter. Movement frequencies by tagged fish decreased from fall through winter, but some individuals of both species moved during winter. Ice processes affected both the habitat use and movement patterns of cutthroat trout and brook trout in this foothills stream.

  6. "Alice in Wonderland"--Based on Stories by Lewis Carroll, Adapted by Ric Averill. Cue Sheet for Families.

    ERIC Educational Resources Information Center

    Bavaria, Richard; And Others

    Designed to be used before and after attending a performance of "Alice in Wonderland," this cue sheet provides information about the performance and suggests activities to help families foster children's understanding and appreciation of the performing arts. The cue sheet presents activities to help children think about the performance, and…

  7. "A New Kind of Rule": The Subversive Narrator in "Alice's Adventures in Wonderland" and "The Pied Piper of Hamelin."

    ERIC Educational Resources Information Center

    Blackburn, William

    1986-01-01

    Compares "Alice's Adventures in Wonderland" to "The Pied Piper of Hamelin," noting that both: (1) were begun for the amusement of specific children; (2) use a subterranean journey as a device; (3) are critical of social authority; and (4) have problematic endings. (SRT)

  8. A tool for optimization of the production and user analysis on the Grid, C. Grigoras for the ALICE Collaboration

    NASA Astrophysics Data System (ADS)

    Grigoras, Costin; Carminati, Federico; Vladimirovna Datskova, Olga; Schreiner, Steffen; Lee, Sehoon; Zhu, Jianlin; Gheata, Mihaela; Gheata, Andrei; Saiz, Pablo; Betev, Latchezar; Furano, Fabrizio; Mendez Lorenzo, Patricia; Grigoras, Alina Gabriela; Bagnasco, Stefano; Peters, Andreas Joachim; Saiz Santos, Maria Dolores

    2011-12-01

    With the LHC and ALICE entering a full operation and production modes, the amount of Simulation and RAW data processing and end user analysis computational tasks are increasing. The efficient management of all these tasks, all of which have large differences in lifecycle, amounts of processed data and methods to analyze the end result, required the development and deployment of new tools in addition to the already existing Grid infrastructure. To facilitate the management of the large scale simulation and raw data reconstruction tasks, ALICE has developed a production framework called a Lightweight Production Manager (LPM). The LPM is automatically submitting jobs to the Grid based on triggers and conditions, for example after a physics run completion. It follows the evolution of the job and publishes the results on the web for worldwide access by the ALICE physicists. This framework is tightly integrated with the ALICE Grid framework AliEn. In addition to the publication of the job status, LPM is also allowing a fully authenticated interface to the AliEn Grid catalogue, to browse and download files, and in the near future will provide simple types of data analysis through ROOT plugins. The framework is also being extended to allow management of end user jobs.

  9. The Mother of Microloans (and Obama): A Q&A with Anthropologist and Author, Alice G. Dewey

    ERIC Educational Resources Information Center

    Maitland, Christine

    2012-01-01

    This article presents an interview with Alice G. Dewey, professor emeritus at the University of Hawai'i at Manoa and granddaughter of the renowned American philosopher John Dewey. She is an economic anthropologist who did ground-breaking research on local markets in Indonesia in the 1950s. She recently co-edited "Surviving Against the Odds:…

  10. The Care and Feeding of the Creative Spirit: Teaching Alice Walker's "In Search of Our Mothers' Gardens."

    ERIC Educational Resources Information Center

    Martin, Terry

    1997-01-01

    Asserts that Alice Walker is one contemporary writer whose voice deserves to be heard in secondary English language arts classrooms. Suggests a number of class activities (dealing with imagery, organization, literary techniques, and writing and identity) for Walker's essay "In Search of Our Mothers' Gardens." (SR)

  11. A First Step in Learning Analytics: Pre-Processing Low-Level Alice Logging Data of Middle School Students

    ERIC Educational Resources Information Center

    Werner, Linda; McDowell, Charlie; Denner, Jill

    2013-01-01

    Educational data mining can miss or misidentify key findings about student learning without a transparent process of analyzing the data. This paper describes the first steps in the process of using low-level logging data to understand how middle school students used Alice, an initial programming environment. We describe the steps that were…

  12. "All of Her Changes Have Made Me Think about My Changes": Fan Readings of Phyllis Reynolds Naylor's "Alice" Series

    ERIC Educational Resources Information Center

    Heinecken, Dawn

    2013-01-01

    This essay follows the insights of reader response theory to examine how readers of Phyllis Reynolds Naylor's Alice McKinley series negotiate textual meaning and construct particular identities in relation to the series' controversial content. Ranking second on the American Library Association's top one hundred list of banned and challenged books…

  13. D-meson production in pp and p-Pb collisions measured with ALICE at the LHC

    NASA Astrophysics Data System (ADS)

    Terrevoli, Cristina

    2016-01-01

    The open heavy-flavour production studied with ALICE at the LHC in pp collisions at √S = 7 TeV and p-Pb collisions at √sNN = 5.02 TeV is presented. Focus is given to the dependence of the production on the multiplicity of charged particles produced in the collision.

  14. Streambed-material characteristics and surface-water quality, Green Pond Brook and tributaries, Picatinny Arsenal, New Jersey, 1983-90

    USGS Publications Warehouse

    Storck, D.A.; Lacombe, Pierre

    1996-01-01

    This report presents the results of a study designed to determine whether Green Pond Brook and its tributaries contain contaminated streambed sediments and to characterize the quaity of water in the brook. Results of previous investigations at Picatinny Arsenal, Morris County, New Jersey, indicate that significant contamination of ground water, surface water, and soil is present at the arsenal. Forty-five streambed-material samples were collected for analysis to determine whether contaminants have migrated to the brook from the surrounding area. Samples were analyzed for trace elements, base/neutral- and acid-etractable compounds, insecticides, and other constituents. Results of an electromagnetic-conductivity and natural-gamma-ray survey were used to describe the distribution of particle sizes in streambed and substreambed sediments. Historical results of analyses of streambed-material and surface-water samples also are presented. Samples of streambed material from three areas in Green Pond Brook and its tributaries contained organic and (or) inorganic constituents in concentrations greater than those typically found at the arsenal. These areas are Green Pond Brook, from the area near the outflow of Picatinny Lake downstream to Farley Avenue; Bear Swamp Brook, from the area near building 241 downstream to the confluence with Green Pond Brook; and Green Pond Brook, from the open burning area downstream to the dam near building 1178. Contaminants identified include trace elements, polynuclear aromatic hydrocarbons, polychlorinated biphenyls, and organochlorine insecticides. Surface water in Green Pond Brook contained several volatile organic compounds, including trichloroethylene, tetrachloroethylene, and 1,2-dichloroethylene, at maximum concen- trations of 3.8, 4.6, and 11 micrograms per liter, respectively. Volatilization is expected to remove volatile organic compounds in the steep, fast- flowing reaches of the brook. No organic or inorganic constituents were

  15. Monitoring the data quality of the real-time event reconstruction in the ALICE High Level Trigger

    NASA Astrophysics Data System (ADS)

    Austrheim Erdal, Hege; Richther, Matthias; Szostak, Artur; Toia, Alberica

    2012-12-01

    ALICE is a dedicated heavy ion experiment at the CERN LHC. The ALICE High Level Trigger was designed to select events with desirable physics properties. Data from several of the major subdetectors in ALICE are processed by the HLT for real-time event reconstruction, for instance the Inner Tracking System, the Time Projection Chamber, the electromagnetc calorimeters, the Transition Radiation Detector and the muon spectrometer. The HLT reconstructs events in real-time and thus provides input for trigger algorithms. It is necessary to monitor the quality of the reconstruction where one focuses on track and event properties. Also, HLT implemented data compression for the TPC during the heavy ion data taking in 2011 to reduce the data rate from the ALICE detector. The key for the data compression is to store clusters (spacepoints) calculated by HLT rather than storing raw data. It is thus very important to monitor the cluster finder performance as a way to monitor the data compression. The data monitoring is divided into two stages. The first stage is performed during data taking. A part of the HLT production chain is dedicated to performing online monitoring and facilities are available in the HLT production cluster to have real-time access to the reconstructed events in the ALICE control room. This includes track and event properties, and in addition, this facility gives a way to display a small fraction of the reconstructed events in an online display. The second part of the monitoring is performed after the data has been transferred to permanent storage. After a post-process of the real-time reconstructed data, one can look in more detail at the cluster finder performance, the quality of the reconstruction of tracks, vertices and vertex position. The monitoring solution is presented in detail, with special attention to the heavy ion data taking of 2011.

  16. NASA Plum Brook's B-2 test facility-Thermal vacuum and propellant test facility

    NASA Astrophysics Data System (ADS)

    Kudlac, Maureen; Weaver, Harold; Cmar, Mark

    2012-06-01

    The National Aeronautics and Space Administration (NASA) Glenn Research Center (GRC) Plum Brook Station (PBS) Spacecraft Propulsion Research Facility, commonly referred to as B-2, is NASA's third largest thermal vacuum facility. It is the largest designed to store and transfer large quantities of liquid hydrogen and liquid oxygen, and is perfectly suited to support developmental testing of upper stage chemical propulsion systems as well as fully integrated stages. The facility is also capable of providing thermal-vacuum simulation services to support testing of large lightweight structures, Cryogenic Fluid Management (CFM) systems, electric propulsion test programs, and other In-Space propulsion programs. A recently completed integrated system test demonstrated the refurbished thermal vacuum capabilities of the facility. The test used the modernized data acquisition and control system to monitor the facility. The heat sink provided a uniform temperature environment of approximately 77K. The modernized infrared lamp array produced a nominal heat flux of 1.4 kW/m2. With the lamp array and heat sink operating simultaneously, the thermal systems produced a heat flux pattern simulating radiation to space on one surface and solar exposure on the other surface.

  17. Reconstructing the demographic history of divergence between European river and brook lampreys using approximate Bayesian computations

    PubMed Central

    Roux, Camille; Neuenschwander, Samuel; Goudet, Jérôme; Launey, Sophie; Evanno, Guillaume

    2016-01-01

    Inferring the history of isolation and gene flow during species divergence is a central question in evolutionary biology. The European river lamprey (Lampetra fluviatilis) and brook lamprey (L. planeri) show a low reproductive isolation but have highly distinct life histories, the former being parasitic-anadromous and the latter non-parasitic and freshwater resident. Here we used microsatellite data from six replicated population pairs to reconstruct their history of divergence using an approximate Bayesian computation framework combined with a random forest model. In most population pairs, scenarios of divergence with recent isolation were outcompeted by scenarios proposing ongoing gene flow, namely the Secondary Contact (SC) and Isolation with Migration (IM) models. The estimation of demographic parameters under the SC model indicated a time of secondary contact close to the time of speciation, explaining why SC and IM models could not be discriminated. In case of an ancient secondary contact, the historical signal of divergence is lost and neutral markers converge to the same equilibrium as under the less parameterized model allowing ongoing gene flow. Our results imply that models of secondary contacts should be systematically compared to models of divergence with gene flow; given the difficulty to discriminate among these models, we suggest that genome-wide data are needed to adequately reconstruct divergence history. PMID:27077007

  18. Atmospheric dry deposition on pines in the Eastern Brook Lake Watershed, Sierra Nevada, California

    NASA Astrophysics Data System (ADS)

    Bytnerowicz, Andrzej; Dawson, P. J.; Morrison, C. L.; Poe, M. P.

    Atmospheric dry deposition to branches of Pinus contorta and P. albicaulis was measured during summer 1987 in a sub-alpine zone at Eastern Brook Lake Watershed (EBLW), eastern Sierra Nevada, California. Results are presented as deposition fluxes of NO 3-, SO 42-, PO 43-, Cl -, F -, NH 4+, Ca 2+, Mg 2+, Na +, K +, Zn 2+, Fe 3+, Mn 2+, Pb 2+ and H +, and compared with other locations in California and elsewhere. Deposition fluxes of anions and cations to the pine branches were low, several times lower than the values determined near the Emerald Lake Watershed (ELW), another sub-alpine location in the western Sierra Nevada. The sums of deposition fluxes of the measured cations and anions to pine surfaces were similar, in contrast to the ELW location where the sums of cation fluxes were much higher than the sums of anion fluxes. A strong positive correlation between depositions of NO 3- and NH 4+, as well as SO 42- and Ca 2+, suggested that large portions of these ions might have originated from particulate NH 4NO 3 and CaSO 4 deposited on pine surfaces. An estimated total N dry deposition (surface deposition of NO 3- and NH 4+ and internal uptake of NO 2 and HNO 3) to the forested area of the EBLW was 29.54 eq ha -1 yr - (about 414 g H ha -1 yr -1).

  19. Pipeline corridors through wetlands -- Impacts on plant communities: Norris Brook Crossing Peabody, Massachusetts

    SciTech Connect

    Shem, L.M.; Van Dyke, G.D.; Zimmerman, R.E.

    1994-12-01

    The goal of the Gas Research Institute Wetland Corridors Program is to document impacts of existing pipelines on the wetlands they traverse. To accomplish this goal, 12 existing wetland crossings were surveyed. These sites varied in elapsed time since pipeline construction, wetland type, pipeline installation techniques, and right-of-way (ROW) management practices. This report presents the results of a survey conducted August 17--19, 1992, at the Norris Brook crossing in the town of Peabody, Essex County, Massachusetts. The pipeline at this site was installed during September and October 1990. A backhoe was used to install the pipeline. The pipe was assembled on the adjacent upland and slid into the trench, after which the backhoe was used again to fill the trench and cover the pipeline. Within two years after pipeline construction, a dense vegetative community, composed predominantly of native perennial species, had become established on the ROW. Compared with adjacent natural areas undisturbed by pipeline installation, there was an increase in purple loosestrife and cattail within the ROW, while large woody species were excluded from the ROW. As a result of the ROW`s presence, habitat diversity, edge-type habitat, and species diversity increased within the site. Crooked-stem aster, Aster prenanthoides (a species on the Massasschusetts list of plants of special concern), occurred in low numbers in the adjacent natural areas and had reinvaded the ROW in low numbers.

  20. Comparing decadal responses of whole-watershed manipulations at the Bear Brook and Fernow experiments.

    PubMed

    Fernandez, Ivan J; Adams, Mary Beth; SanClements, Michael D; Norton, Stephen A

    2010-12-01

    The Bear Brook Watershed in Maine (BBWM), USA, and the Fernow Experimental Forest in West Virginia, USA, represent unique, long-term, paired, whole watershed, experimental manipulations focusing on the effects of nitrogen (N) and sulfur (S) deposition on temperate forests. Both watersheds began whole-ecosystem additions of N and S as (NH(4))(2)SO(4) in the fall of 1989, and both are entering their third decade of chronic enrichment of the treated watersheds, while the reference watersheds offer unique opportunities to evaluate forest watershed responses to recovery. Differences between BBWM and Fernow in the history of atmospheric deposition, soil properties, and forest composition all contribute to different response trajectories in stream chemical exports over time. The four watersheds represent a spectrum of N enrichment and retention, ranging from ≈98% N retention in the reference watershed in Maine, to ≈20% N retention in the treated watershed in West Virginia. Despite these differences, there is evidence that mechanisms of response in base cation leaching and other processes are similar among all four watersheds. In both cases, the history to date of two decades of research and monitoring has provided new insights into ecosystem response not evident in more traditional short-term research.

  1. Soil chemical and physical properties at the Bear Brook Watershed in Maine, USA.

    PubMed

    SanClements, Michael D; Fernandez, Ivan J; Norton, Stephen A

    2010-12-01

    Acidic deposition leads to the acidification of waters and accelerated leaching and depletion of soil base cations. The Bear Brook Watershed in Maine has used whole-watershed chemical manipulations to study the effects of elevated N and S on forest ecosystem function on a decadal time scale. The objectives of this study were to define the chemical and physical characteristics of soils in both the reference and treated watersheds after 17 years of treatment and assess evidence of change in soil chemistry by comparing soil studies in 1998 and 2006. Results from 1998 confirmed depletion of soil base cation pools and decreased pH due to elevated N and S within the treated watershed. However, between 1998 and 2006, during a period of declining SO4(2-) deposition and continued whole-watershed experimental acidification on the treated watershed, there was little evidence of continued soil exchangeable base cation concentration depletion or recovery. The addition of a pulse of litterfall and accelerating mineralization from a severe ice storm in 1998 may have had significant effects on forest floor nutrient pools and cycling between 1998 and 2006. Our findings suggest that mineralization of additional litter inputs from the ice storm may have obscured temporal trends in soil chemistry. The physical data presented also demonstrate the importance of coarse fragments in the architecture of these soils. This study underscores the importance of long-term, quantitative soil monitoring in determining the trajectories of change in forest soils and ecosystem processes over time.

  2. NASA Plum Brook's B-2 Test Facility: Thermal Vacuum and Propellant Test Facility

    NASA Technical Reports Server (NTRS)

    Kudlac, Maureen T.; Weaver, Harold F.; Cmar, Mark D.

    2012-01-01

    The National Aeronautics and Space Administration (NASA) Glenn Research Center (GRC) Plum Brook Station (PBS) Spacecraft Propulsion Research Facility, commonly referred to as B-2, is NASA's third largest thermal vacuum facility. It is the largest designed to store and transfer large quantities of liquid hydrogen and liquid oxygen, and is perfectly suited to support developmental testing of upper stage chemical propulsion systems as well as fully integrated stages. The facility is also capable of providing thermal-vacuum simulation services to support testing of large lightweight structures, Cryogenic Fluid Management (CFM) systems, electric propulsion test programs, and other In-Space propulsion programs. A recently completed integrated system test demonstrated the refurbished thermal vacuum capabilities of the facility. The test used the modernized data acquisition and control system to monitor the facility. The heat sink provided a uniform temperature environment of approximately 77 K. The modernized infrared lamp array produced a nominal heat flux of 1.4 kW/sq m. With the lamp array and heat sink operating simultaneously, the thermal systems produced a heat flux pattern simulating radiation to space on one surface and solar exposure on the other surface.

  3. Insights from transformations under way at four Brookings-Dartmouth accountable care organization pilot sites.

    PubMed

    Larson, Bridget K; Van Citters, Aricca D; Kreindler, Sara A; Carluzzo, Kathleen L; Gbemudu, Josette N; Wu, Frances M; Nelson, Eugene C; Shortell, Stephen M; Fisher, Elliott S

    2012-11-01

    This cross-site comparison of the early experience of four provider organizations participating in the Brookings-Dartmouth Accountable Care Organization Collaborative identifies factors that sites perceived as enablers of successful ACO formation and performance. The four pilots varied in size, with between 7,000 and 50,000 attributed patients and 90 to 2,700 participating physicians. The sites had varying degrees of experience with performance-based payments; however, all formed collaborative new relationships with payers and created shared savings agreements linked to performance on quality measures. Each organization devoted major efforts to physician engagement. Policy makers now need to consider how to support and provide incentives for the successful formation of multipayer ACOs, and how to align private-sector and CMS performance measures. Linking providers to learning networks where payers and providers can address common technical issues could help. These sites' transitions to the new payment model constitutes an ongoing journey that will require continual adaptation in the structure of contracts and organizational attributes. PMID:23129669

  4. Summer temperature metrics for predicting brook trout (Salvelinus fontinalis) distribution in streams

    USGS Publications Warehouse

    Parrish, Donna; Butryn, Ryan S.; Rizzo, Donna M.

    2012-01-01

    We developed a methodology to predict brook trout (Salvelinus fontinalis) distribution using summer temperature metrics as predictor variables. Our analysis used long-term fish and hourly water temperature data from the Dog River, Vermont (USA). Commonly used metrics (e.g., mean, maximum, maximum 7-day maximum) tend to smooth the data so information on temperature variation is lost. Therefore, we developed a new set of metrics (called event metrics) to capture temperature variation by describing the frequency, area, duration, and magnitude of events that exceeded a user-defined temperature threshold. We used 16, 18, 20, and 22°C. We built linear discriminant models and tested and compared the event metrics against the commonly used metrics. Correct classification of the observations was 66% with event metrics and 87% with commonly used metrics. However, combined event and commonly used metrics correctly classified 92%. Of the four individual temperature thresholds, it was difficult to assess which threshold had the “best” accuracy. The 16°C threshold had slightly fewer misclassifications; however, the 20°C threshold had the fewest extreme misclassifications. Our method leveraged the volumes of existing long-term data and provided a simple, systematic, and adaptable framework for monitoring changes in fish distribution, specifically in the case of irregular, extreme temperature events.

  5. The crustal section of the Siniktanneyak Mountain ophiolite, Brooks Range, Alaska

    SciTech Connect

    Bickerstaff, D.; Harris, R.A.; Miller, M.A. . Dept. of Geology and Geography)

    1993-04-01

    Fragments of the upper crustal section of the Brooks Range Ophiolite on the west flank of Siniktanneyak Mountain expose important contact relations and paleohorizontal indicators. The nearly complete crustal sequence faces northwest. Based on field observations, the crustal units encountered at Siniktanneyak Mountain from bottom to top are: (1) layered gabbro, (2) isotropic gabbro, (3) high level and late-stage intrusions of diorite and diabase, (4) rare sheeted dikes, (5) basalt, and (6) a bedded volcanic tuff. Potassium feldspar-bearing pegmatites are also found. Of particular interest is the orientation of the layered gabbro, sheeted dikes, and the bedded volcanic tuff. The steeply dipping gabbro layers strike N-S, the adjacent vertical sheeted dikes strike NE-SW. Bedded volcanic tuff and lavas are flat lying. Contacts within the upper crust units are often covered by talus. Contacts between various plutonic rocks are both sharp and gradational, suggesting syn- and post-cooling intrusions. Contacts between plutonic rock and higher volcanic rock appear to be fault contacts.

  6. Lateral continuity of the Blarney Creek Thrust, Doonerak Windown, Central Brooks Range, Alaska

    SciTech Connect

    Seidensticker, C.M.; Julian, F.E.; Phelps, J.C.; Oldow, J.S.; Avellemant, H.G.

    1985-04-01

    The contact between Carboniferous and lower Paleozoic rocks, exposed along the northern margin of the Doonerak window in the central Brooks Range, is a major thrust fault called the Blarney Creek thrust (BCT). The BCT has been traced over a distance of 25 km, from Falsoola Mountain to Wien Mountain. The tectonic nature of this contact is demonstrated by: (1) omission of stratigraphic units above and below the BCT; (2) large angular discordance in orientation of first-generation cleavage at the BCT; (3) numerous thrust imbricates developed in the upper-plate Carboniferous section that sole into the BCT; and (4) truncation of an upper-plate graben structure at the BCT. Lack of evidence for pre-Carboniferous deformation in the lower plate casts doubt on the interpretation of the contact as an angular unconformity. However, the localized presence below the BCT of Mississippian Kekiktuk Conglomerate and Kayak Shale, in apparent depositional contact with lower Paleozoic rocks, suggests that the BCT follows an originally disconformable contact between the Carboniferous and lower Paleozoic rocks. The juxtaposition of younger over older rocks at the BCT is explained by calling upon the BCT to act as the upper detachment surface of a duplex structure. Duplex development involves initial imbrication of the Carboniferous section using the BCT as a basal decollement, followed by formation of deeper thrusts in the lower Paleozoic section, which ramp up and merge into the BCT.

  7. Modeling a High Resolution Stream Chloride Time Series from the Biscuit Brook Catchment, Catskills, NY

    NASA Astrophysics Data System (ADS)

    Shaw, S. B.; Walter, M. T.; Harpold, A. A.

    2006-12-01

    Compelling work by Kirchner and colleagues (e.g., Kirchner et al., 2001, J. of Hydro., 254:81-100) suggests that lengthy, high resolution chloride time series can reveal the underlying travel time distribution of water in a catchment. However, few data sets of suitable length or sampling frequency have been available for assessment. Our analysis of a ten-year, weekly stream chloride time series data set for the steep, forested Biscuit Brook catchment in the Catskill Mountains of NY resulted in a 1/f spectral density plot. We used a lumped, two reservoir model with an upper reservoir representing quickflow and a lower reservoir representing base flow to reasonably replicate stream flow and stream chloride concentrations. A spectral analysis of the modeled daily chloride signal also resulted in a 1/f spectral density plot. This suggests that in some systems a 1/f signature can result from processes other than superposition of lateral chemical transport pathways, as has been previously hypothesized by other researchers. In this case, it appears that a long-term periodicity established by seasonal moisture deficits combines with shorter wavelength variations from rainfall inputs to create a 1/f spectral density for chloride concentration.

  8. Data Acquisition System Architecture and Capabilities At NASA GRC Plum Brook Station's Space Environment Test Facilities

    NASA Technical Reports Server (NTRS)

    Evans, Richard K.; Hill, Gerald M.

    2012-01-01

    Very large space environment test facilities present unique engineering challenges in the design of facility data systems. Data systems of this scale must be versatile enough to meet the wide range of data acquisition and measurement requirements from a diverse set of customers and test programs, but also must minimize design changes to maintain reliability and serviceability. This paper presents an overview of the common architecture and capabilities of the facility data acquisition systems available at two of the world?s largest space environment test facilities located at the NASA Glenn Research Center?s Plum Brook Station in Sandusky, Ohio; namely, the Space Propulsion Research Facility (commonly known as the B-2 facility) and the Space Power Facility (SPF). The common architecture of the data systems is presented along with details on system scalability and efficient measurement systems analysis and verification. The architecture highlights a modular design, which utilizes fully-remotely managed components, enabling the data systems to be highly configurable and support multiple test locations with a wide-range of measurement types and very large system channel counts.

  9. Predicting acidification recovery at the Hubbard Brook Experimental Forest, New Hampshire: evaluation of four models.

    PubMed

    Tominaga, Koji; Aherne, Julian; Watmough, Shaun A; Alveteg, Mattias; Cosby, Bernard J; Driscoll, Charles T; Posch, Maximilian; Pourmokhtarian, Afshin

    2010-12-01

    The performance and prediction uncertainty (owing to parameter and structural uncertainties) of four dynamic watershed acidification models (MAGIC, PnET-BGC, SAFE, and VSD) were assessed by systematically applying them to data from the Hubbard Brook Experimental Forest (HBEF), New Hampshire, where long-term records of precipitation and stream chemistry were available. In order to facilitate systematic evaluation, Monte Carlo simulation was used to randomly generate common model input data sets (n = 10,000) from parameter distributions; input data were subsequently translated among models to retain consistency. The model simulations were objectively calibrated against observed data (streamwater: 1963-2004, soil: 1983). The ensemble of calibrated models was used to assess future response of soil and stream chemistry to reduced sulfur deposition at the HBEF. Although both hindcast (1850-1962) and forecast (2005-2100) predictions were qualitatively similar across the four models, the temporal pattern of key indicators of acidification recovery (stream acid neutralizing capacity and soil base saturation) differed substantially. The range in predictions resulted from differences in model structure and their associated posterior parameter distributions. These differences can be accommodated by employing multiple models (ensemble analysis) but have implications for individual model applications.

  10. Hiding in Plain Sight: A Case for Cryptic Metapopulations in Brook Trout (Salvelinus fontinalis).

    PubMed

    Kazyak, David C; Hilderbrand, Robert H; King, Tim L; Keller, Stephen R; Chhatre, Vikram E

    2016-01-01

    A fundamental issue in the management and conservation of biodiversity is how to define a population. Spatially contiguous fish occupying a stream network have often been considered to represent a single, homogenous population. However, they may also represent multiple discrete populations, a single population with genetic isolation-by-distance, or a metapopulation. We used microsatellite DNA and a large-scale mark-recapture study to assess population structure in a spatially contiguous sample of Brook Trout (Salvelinus fontinalis), a species of conservation concern. We found evidence for limited genetic exchange across small spatial scales and in the absence of barriers to physical movement. Mark-recapture and stationary passive integrated transponder antenna records demonstrated that fish from two tributaries very seldom moved into the opposite tributary, but movements between the tributaries and mainstem were more common. Using Bayesian genetic clustering, we identified two genetic groups that exhibited significantly different growth rates over three years of study, yet survival rates were very similar. Our study highlights the importance of considering the possibility of multiple genetically distinct populations occurring within spatially contiguous habitats, and suggests the existence of a cryptic metapopulation: a spatially continuous distribution of organisms exhibiting metapopulation-like behaviors.

  11. The Cenozoic structural evolution of a fold-and-thrust belt, northeastern Brooks Range, Alaska

    SciTech Connect

    Hanks, C.L. )

    1993-03-01

    A Cenozoic fold-and-thrust belt in the eastern structural province of the northeastern Brooks Range exposes polydeformed low-grade metasedimentary and metavolcanic rocks of the pre-Mississippian basement and its sedimentary cover immediately adjacent to much younger foredeep deposits. Analysis of mesoscopic and map-scale structures in the range-front region suggests that at least one pre-Mississippian deformational event was recorded into the basement sequence by north-vergent fold-and-thrust structures and associated penetrative structures. Most of later Cenozoic shortening of the pre-Mississippian rocks was accommodated by thrust duplication, with little development of penetrative mesoscopic structures. Although separated from the underlying basement rocks by a major regional decollement horizon, Cenozoic deformation in the overlying Mississippian through Lower Cretaceous cover sequence also was primarily by thrust duplication. Although local and regional structural trends within the cover sequence suggest that Cenozoic deformation was north-northwest directed, east-west Cenozoic structural trends within the pre-Mississippian rocks may reflect an inherited pre-Mississippian structural grain and/or pre-Mississippian-age structures reactivated during Cenozoic deformation. A regional balanced cross section of the eastern structural province was constructed. 29 refs., 14 figs.

  12. Hiding in Plain Sight: A Case for Cryptic Metapopulations in Brook Trout (Salvelinus fontinalis)

    PubMed Central

    Kazyak, David C.; Hilderbrand, Robert H.; King, Tim L.; Keller, Stephen R.; Chhatre, Vikram E.

    2016-01-01

    A fundamental issue in the management and conservation of biodiversity is how to define a population. Spatially contiguous fish occupying a stream network have often been considered to represent a single, homogenous population. However, they may also represent multiple discrete populations, a single population with genetic isolation-by-distance, or a metapopulation. We used microsatellite DNA and a large-scale mark-recapture study to assess population structure in a spatially contiguous sample of Brook Trout (Salvelinus fontinalis), a species of conservation concern. We found evidence for limited genetic exchange across small spatial scales and in the absence of barriers to physical movement. Mark-recapture and stationary passive integrated transponder antenna records demonstrated that fish from two tributaries very seldom moved into the opposite tributary, but movements between the tributaries and mainstem were more common. Using Bayesian genetic clustering, we identified two genetic groups that exhibited significantly different growth rates over three years of study, yet survival rates were very similar. Our study highlights the importance of considering the possibility of multiple genetically distinct populations occurring within spatially contiguous habitats, and suggests the existence of a cryptic metapopulation: a spatially continuous distribution of organisms exhibiting metapopulation-like behaviors. PMID:26730588

  13. Are brook trout streams in western Virginia and Shenandoah National Park recovering from acidification?

    PubMed

    Webb, James R; Cosby, Bernard J; Deviney, Frank A; Galloway, James N; Maben, Suzanne W; Bulger, Arthur J

    2004-08-01

    Streamwater composition data obtained through periodic sampling of streams that support brook trout (Salvelinus fontinalis) in the mountains of western Virginia were examined for evidence of recovery from acidification during the 1988-2001 period. Measurements of sulfate deposition in precipitation indicate that sulfate deposition in the region declined approximately 40% between 1985 and 2000. While no significant regional trends in acid-base constituents were observed for the set (n = 65) of western Virginia study streams, significant regional trends were observed for a subset (n = 14) of streams in Shenandoah National Park (SNP). For the subset of SNP streams, the median increase in acid-neutralizing capacity (ANC) was 0.168 microequiv L(-1) year(-1) and the median decrease in sulfate concentration was -0.229 microequiv L(-1) year(-1). Although these trends are consistent with recovery from acidification, the degree of apparent recovery is small compared to estimates of historic acidification in SNP streams and much less than observed in other, more northern regions in the United States. Correlation between sulfate concentration trends and current sulfate concentrations in streamwater suggests that recovery from stream acidification in the western Virginia region is determined by sulfur retention processes in watershed soils. A transient increase in nitrate concentrations that occurred among some western Virginia streams following forest defoliation by the gypsy moth (Lymantria dispar) complicates interpretation of the observed patterns of change in acid-base status.

  14. Results of the independent radiological verification survey of the lower Sheffield Brook floodplain, Wayne, New Jersey

    SciTech Connect

    Yalcintas, M.G.; Carrier, R.F.

    1989-05-01

    Prior to 1971, the W.R. Grace Company processed and stored radioactive materials at Wayne, New Jersey, under license to the Atomic Energy Commission. Decontamination of structures and storage of waste materials on the property at the Wayne Interim Storage Site (WISS) took place in 1974. Surveys by the State of New Jersey Department of Environmental Protection and by Oak Ridge Associated Universities for the NRC in 1982 indicated that properties adjacent to the WISS contained surface contamination by radioactive residuals in amounts exceeding those acceptable under US Department of Energy (DOE) remedial action guidelines. At the request of DOE, remedial actions have been conducted by Bechtel National, Inc., to remove radioactive residuals from properties adjacent to the site. It is the policy of DOE to assign an independent verification contractor to ensure the effectiveness of remedial actions performed within the Formerly Utilized Sites Remedial Action Program. This report describes the methods and results of those studies that were conducted by the Measurement Applications and Development Group of the Oak Ridge National Laboratory for the lower Sheffield Brook floodplain west of the WISS. Based upon post-remedial action and verification survey data, it was concluded that residual soil concentrations and gamma levels following excavation and backfilling of the area are within the limits prescribed by DOE radiological guidelines. 12 refs., 6 figs., 8 tabs.

  15. Insights from transformations under way at four Brookings-Dartmouth accountable care organization pilot sites.

    PubMed

    Larson, Bridget K; Van Citters, Aricca D; Kreindler, Sara A; Carluzzo, Kathleen L; Gbemudu, Josette N; Wu, Frances M; Nelson, Eugene C; Shortell, Stephen M; Fisher, Elliott S

    2012-11-01

    This cross-site comparison of the early experience of four provider organizations participating in the Brookings-Dartmouth Accountable Care Organization Collaborative identifies factors that sites perceived as enablers of successful ACO formation and performance. The four pilots varied in size, with between 7,000 and 50,000 attributed patients and 90 to 2,700 participating physicians. The sites had varying degrees of experience with performance-based payments; however, all formed collaborative new relationships with payers and created shared savings agreements linked to performance on quality measures. Each organization devoted major efforts to physician engagement. Policy makers now need to consider how to support and provide incentives for the successful formation of multipayer ACOs, and how to align private-sector and CMS performance measures. Linking providers to learning networks where payers and providers can address common technical issues could help. These sites' transitions to the new payment model constitutes an ongoing journey that will require continual adaptation in the structure of contracts and organizational attributes.

  16. Hiding in Plain Sight: A Case for Cryptic Metapopulations in Brook Trout (Salvelinus fontinalis).

    PubMed

    Kazyak, David C; Hilderbrand, Robert H; King, Tim L; Keller, Stephen R; Chhatre, Vikram E

    2016-01-01

    A fundamental issue in the management and conservation of biodiversity is how to define a population. Spatially contiguous fish occupying a stream network have often been considered to represent a single, homogenous population. However, they may also represent multiple discrete populations, a single population with genetic isolation-by-distance, or a metapopulation. We used microsatellite DNA and a large-scale mark-recapture study to assess population structure in a spatially contiguous sample of Brook Trout (Salvelinus fontinalis), a species of conservation concern. We found evidence for limited genetic exchange across small spatial scales and in the absence of barriers to physical movement. Mark-recapture and stationary passive integrated transponder antenna records demonstrated that fish from two tributaries very seldom moved into the opposite tributary, but movements between the tributaries and mainstem were more common. Using Bayesian genetic clustering, we identified two genetic groups that exhibited significantly different growth rates over three years of study, yet survival rates were very similar. Our study highlights the importance of considering the possibility of multiple genetically distinct populations occurring within spatially contiguous habitats, and suggests the existence of a cryptic metapopulation: a spatially continuous distribution of organisms exhibiting metapopulation-like behaviors. PMID:26730588

  17. Data Acquisition System Architecture and Capabilities at NASA GRC Plum Brook Station's Space Environment Test Facilities

    NASA Technical Reports Server (NTRS)

    Evans, Richard K.; Hill, Gerald M.

    2014-01-01

    Very large space environment test facilities present unique engineering challenges in the design of facility data systems. Data systems of this scale must be versatile enough to meet the wide range of data acquisition and measurement requirements from a diverse set of customers and test programs, but also must minimize design changes to maintain reliability and serviceability. This paper presents an overview of the common architecture and capabilities of the facility data acquisition systems available at two of the world's largest space environment test facilities located at the NASA Glenn Research Center's Plum Brook Station in Sandusky, Ohio; namely, the Space Propulsion Research Facility (commonly known as the B-2 facility) and the Space Power Facility (SPF). The common architecture of the data systems is presented along with details on system scalability and efficient measurement systems analysis and verification. The architecture highlights a modular design, which utilizes fully-remotely managed components, enabling the data systems to be highly configurable and support multiple test locations with a wide-range of measurement types and very large system channel counts.

  18. Are brook trout streams in western Virginia and Shenandoah National Park recovering from acidification?

    PubMed

    Webb, James R; Cosby, Bernard J; Deviney, Frank A; Galloway, James N; Maben, Suzanne W; Bulger, Arthur J

    2004-08-01

    Streamwater composition data obtained through periodic sampling of streams that support brook trout (Salvelinus fontinalis) in the mountains of western Virginia were examined for evidence of recovery from acidification during the 1988-2001 period. Measurements of sulfate deposition in precipitation indicate that sulfate deposition in the region declined approximately 40% between 1985 and 2000. While no significant regional trends in acid-base constituents were observed for the set (n = 65) of western Virginia study streams, significant regional trends were observed for a subset (n = 14) of streams in Shenandoah National Park (SNP). For the subset of SNP streams, the median increase in acid-neutralizing capacity (ANC) was 0.168 microequiv L(-1) year(-1) and the median decrease in sulfate concentration was -0.229 microequiv L(-1) year(-1). Although these trends are consistent with recovery from acidification, the degree of apparent recovery is small compared to estimates of historic acidification in SNP streams and much less than observed in other, more northern regions in the United States. Correlation between sulfate concentration trends and current sulfate concentrations in streamwater suggests that recovery from stream acidification in the western Virginia region is determined by sulfur retention processes in watershed soils. A transient increase in nitrate concentrations that occurred among some western Virginia streams following forest defoliation by the gypsy moth (Lymantria dispar) complicates interpretation of the observed patterns of change in acid-base status. PMID:15352446

  19. Pillow basalts of the Angayucham terrane: oceanic plateau and island crust accreted to the Brooks Range

    USGS Publications Warehouse

    Pallister, J.S.; Budahn, J.R.; Murchey, B.L.

    1989-01-01

    The Angayucham Mountains (north margin of the Yukon-Koyukuk province) are made up of an imbricate stack of four to eight east-west trending, steeply dipping, fault slabs composed of Paleozoic, Middle to Late Triassic, and Early Jurassic oceanic upper crustal rocks. Field relations and geochemical characteristics of the basaltic rocks suggest that the fault slabs were derived from an oceanic plateau or island setting and were emplaced onto the Brooks Range continental margin. The basalts are variably metamorphosed to prehnite-pumpellyite and low-greenschist facies. Major element analyses suggest that many are hypersthene-normative olivine tholeiites. The Triassic and Jurassic basalts are geochemically most akin to modern oceanic plateau and island basalts. Field evidence also favors an oceanic plateau or island setting. The great composite thickness of pillow basalt probably resulted from obduction faulting, but the lack of fault slabs of gabbro or peridotite suggests that obduction faults did not penetrate below oceanic layer 2, a likely occurrence if layer 2 were anomalously thick, as in the vicinity of an oceanic island. -from Authors

  20. Geochronology of the western and central Brooks Range, Alaska: Implications for the geologic evolution of the Anarraaq and Red Dog Zn-Pb-Ag deposits

    USGS Publications Warehouse

    Rombach, C.S.; Layer, P.W.

    2004-01-01

    A compilation of published geochronology of rocks and minerals from the western and central Brooks Range provides a framework for understanding the complex history of the Brooks Range and northern Alaska. A simplified timeline of events comprises (1) Devonian extension, (2) Mississippian extension and Zn-Pb-Ag mineralization, (3) a passive interval, (4) pre-Brooks Range orogeny rock-formation and thermal event, (5) inception of Brooks Range orogeny, (6) exhumation and the end of main-stage deformation, and (7) subsequent episodic deformation. This compilation is supplemented by new 40Ar/39Ar dates of white mica from the Anarraaq and Red Dog Zn-Pb-Ag (+ barite) deposits from the western Brooks Range. The deposits are hosted in black shale and carbonate rocks of the Late Mississippian-Early Pennsylvanian Kuna Formation. Quartz-pyrite-white mica grains in sedimentary rocks above the Anarraaq deposit yield an age of 195.0 ?? 2.0 Ma, and paragenetically late quartz-pyrite-white mica from the Main orebody at the Red Dog deposit has an age of 126.1 ?? 0.7 Ma. These white micas are much younger than the age of Zn-Pb-Ag mineralization at Red Dog (338 ?? 5.8 Ma Re-Os age of pyrite). The date for white mica from Anarraaq (???195 Ma) appears to be related to a large-scale thermal event in the region immediately before the inception of the Brooks Range orogeny. The white mica from the Red Dog deposit (???126 Ma) correlates with the later stages of the orogeny, a period of blueschist metamorphism, extension, and rapid exhumation, which varied with geographic location. These dates suggest that the Red Dog deposits underwent significant hydrothermal overprinting during multiple episodes of the Brooks Range orogeny. ?? 2004 by Economic Geology.